BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017268
(374 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224143611|ref|XP_002336061.1| predicted protein [Populus trichocarpa]
gi|222869846|gb|EEF06977.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/375 (83%), Positives = 341/375 (90%), Gaps = 4/375 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV+D DGKKIRDKEV+DYIQ+RLE++ASFAPSLR SVGVMP+EEHT+IE TGTDRP
Sbjct: 68 MDVFNVVDQDGKKIRDKEVMDYIQRRLESNASFAPSLRGSVGVMPSEEHTAIELTGTDRP 127
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTD STG AIKDPKRLSTI+ELL NV
Sbjct: 128 GLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTIRELLCNV 187
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSRPQVTVLN 179
L+G DD + A T+LSPPG+ +RERRLHQIMF DRDYERVE+A + R EDKSSRP VTVLN
Sbjct: 188 LKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSRPHVTVLN 247
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
IE+DYTV++MRSKDRPKLLFDIVCTLTDM+YVVFHGMV+TGR EAYQEFYIRHVDGLP+S
Sbjct: 248 IERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLPVS 307
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
S+AERERV+QCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL IKRAEI T G
Sbjct: 308 SDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKRAEILTKG 367
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK KDTFYVTDVTGNPVDPKIIDSI RQIG TKL VKR++IL+PKPP+ETT G+ GN F
Sbjct: 368 GKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETTMGYIFGNLF 427
Query: 360 KARTFQTFKLIRSYS 374
KAR TFKLIRSYS
Sbjct: 428 KAR---TFKLIRSYS 439
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 14/167 (8%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N ++ TVI + S ++ +L +V LTDM V+ +++ F +
Sbjct: 15 PRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYISSDGDWFMDVFNVV 74
Query: 232 HVDGLPISSEAERERVIQCLEA----AIERRASEGL-------ELELCTEDRVGLLSDIT 280
DG I + + + + LE+ A R S G+ +EL DR GLLS++
Sbjct: 75 DQDGKKIRDKEVMDYIQRRLESNASFAPSLRGSVGVMPSEEHTAIELTGTDRPGLLSEVC 134
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIR 325
+ + ++ AEI T + +VT D TG + DPK + +IR
Sbjct: 135 AVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTIR 181
>gi|224055763|ref|XP_002298641.1| predicted protein [Populus trichocarpa]
gi|222845899|gb|EEE83446.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 640 bits (1651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/377 (83%), Positives = 341/377 (90%), Gaps = 6/377 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQ--RLETDASFAPSLRSSVGVMPTEEHTSIEFTGTD 58
MDVFNV+D DGKKIRDKEV+DYIQ+ RLE++ASFAPSLR SVGVMP+EEHT+IE TGTD
Sbjct: 68 MDVFNVVDQDGKKIRDKEVMDYIQRVRRLESNASFAPSLRGSVGVMPSEEHTAIELTGTD 127
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 118
RPGL SEVCAVL DLHCNVVNAEIWTHN RAAAVVHVTD STG AIKDPKRLSTI+ELL
Sbjct: 128 RPGLLSEVCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTIRELLC 187
Query: 119 NVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSRPQVTV 177
NVL+G DD + A T+LSPPG+ +RERRLHQIMF DRDYERVE+A + R EDKSSRP VTV
Sbjct: 188 NVLKGNDDSKTATTTLSPPGVTSRERRLHQIMFADRDYERVERAGLARFEDKSSRPHVTV 247
Query: 178 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 237
LNIE+DYTV++MRSKDRPKLLFDIVCTLTDM+YVVFHGMV+TGR EAYQEFYIRHVDGLP
Sbjct: 248 LNIERDYTVVSMRSKDRPKLLFDIVCTLTDMEYVVFHGMVSTGRMEAYQEFYIRHVDGLP 307
Query: 238 ISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297
+SS+AERERV+QCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL IKRAEI T
Sbjct: 308 VSSDAERERVVQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLCIKRAEILT 367
Query: 298 IGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGN 357
GGK KDTFYVTDVTGNPVDPKIIDSI RQIG TKL VKR++IL+PKPP+ETT G+ GN
Sbjct: 368 KGGKAKDTFYVTDVTGNPVDPKIIDSICRQIGQTKLLVKRNSILSPKPPQETTMGYIFGN 427
Query: 358 FFKARTFQTFKLIRSYS 374
FKAR TFKLIRSYS
Sbjct: 428 LFKAR---TFKLIRSYS 441
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 16/169 (9%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N ++ TVI + S ++ +L +V LTDM V+ +++ F +
Sbjct: 15 PRVVIDNDACEEATVIQVDSVNKHGILLKVVQVLTDMNLVITKAYISSDGDWFMDVFNVV 74
Query: 232 HVDGLPISSEAERERV--IQCLEA----AIERRASEGL-------ELELCTEDRVGLLSD 278
DG I + + + ++ LE+ A R S G+ +EL DR GLLS+
Sbjct: 75 DQDGKKIRDKEVMDYIQRVRRLESNASFAPSLRGSVGVMPSEEHTAIELTGTDRPGLLSE 134
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIR 325
+ + + ++ AEI T + +VT D TG + DPK + +IR
Sbjct: 135 VCAVLTDLHCNVVNAEIWTHNTRAAAVVHVTDDSTGCAIKDPKRLSTIR 183
>gi|255543679|ref|XP_002512902.1| amino acid binding protein, putative [Ricinus communis]
gi|223547913|gb|EEF49405.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 638 bits (1645), Expect = e-180, Method: Compositional matrix adjust.
Identities = 310/376 (82%), Positives = 337/376 (89%), Gaps = 2/376 (0%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNVID DG KIRDKEVI YIQ+RLE++ASFAPSLR SVGVMP+E+HTSIE +G DRP
Sbjct: 68 MDVFNVIDQDGNKIRDKEVIGYIQRRLESNASFAPSLRGSVGVMPSEDHTSIELSGNDRP 127
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVLADL CNVVNAEIWTHN RAAAVVHVTD STG A+KDPKRLSTIKELL NV
Sbjct: 128 GLLSEVCAVLADLRCNVVNAEIWTHNARAAAVVHVTDDSTGCAVKDPKRLSTIKELLCNV 187
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK-AVGRVEDKSSRPQVTVLN 179
L+G +D + AK +LSPPGI +RERRLHQIMF DRDYERV++ +GR+EDKSSRP VTVLN
Sbjct: 188 LKGNNDLKAAKMTLSPPGITSRERRLHQIMFADRDYERVDRVGLGRLEDKSSRPHVTVLN 247
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPI 238
IEKDY+VITMRSKDRPKLLFDIVCTLTDM+YVVFHGMVN GR EAYQEFYIRHVDGLPI
Sbjct: 248 IEKDYSVITMRSKDRPKLLFDIVCTLTDMEYVVFHGMVNAGRKEEAYQEFYIRHVDGLPI 307
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SS+AERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITR FRENSL IKRAEIST
Sbjct: 308 SSDAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRTFRENSLCIKRAEISTK 367
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNF 358
GG KDTFYVTDVTG+PVDPKI+DSI RQIG T+LQVK++ L+PKP +ETT G+ LG
Sbjct: 368 GGIAKDTFYVTDVTGSPVDPKIVDSICRQIGQTRLQVKQNLTLSPKPAQETTMGYLLGTL 427
Query: 359 FKARTFQTFKLIRSYS 374
FKARTFQ FKLIRSYS
Sbjct: 428 FKARTFQNFKLIRSYS 443
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + +D TVI + S ++ +L +V LTDM V+ +++ F +
Sbjct: 15 PRVVIDNDVCEDATVIQVDSVNKHGILLQVVQVLTDMNLVIKKAYISSDGGWFMDVFNVI 74
Query: 232 HVDGLPISSEAERERVIQCLEA----AIERRASEGL-------ELELCTEDRVGLLSDIT 280
DG I + + + LE+ A R S G+ +EL DR GLLS++
Sbjct: 75 DQDGNKIRDKEVIGYIQRRLESNASFAPSLRGSVGVMPSEDHTSIELSGNDRPGLLSEVC 134
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQI-----GHTKL 333
+ + ++ AEI T + +VT D TG V DPK + +I+ + G+ L
Sbjct: 135 AVLADLRCNVVNAEIWTHNARAAAVVHVTDDSTGCAVKDPKRLSTIKELLCNVLKGNNDL 194
Query: 334 QVKRSTILAP 343
+ + T+ P
Sbjct: 195 KAAKMTLSPP 204
>gi|356561659|ref|XP_003549097.1| PREDICTED: uncharacterized protein LOC100818506 [Glycine max]
Length = 445
Score = 602 bits (1553), Expect = e-170, Method: Compositional matrix adjust.
Identities = 295/378 (78%), Positives = 331/378 (87%), Gaps = 4/378 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNVID +G KIRDKEVIDYIQ+RLE + SFAPSLR SVGV+PTEEHT IE TGTDRP
Sbjct: 68 MDVFNVIDHNGNKIRDKEVIDYIQRRLENNPSFAPSLRESVGVVPTEEHTVIELTGTDRP 127
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+CAVL DLHCNVV AEIWTHN RAAAVVHVTD S+G AIKDP RLSTI++LL NV
Sbjct: 128 GLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRDLLSNV 187
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKSSRP--QVTV 177
LRG +D + A+T+LSPPG+ NR+RRLHQIMF DRDYER+E+A G + D+ RP VTV
Sbjct: 188 LRGSNDPKTARTTLSPPGVTNRDRRLHQIMFADRDYERIERAGRGGLRDRDKRPLPHVTV 247
Query: 178 LN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
++ +EKDYTV+TMR++DRPKLLFDIVCTLTDMQYVVFHG+V T RTEA+QEFYIRHVDG
Sbjct: 248 VDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRTEAFQEFYIRHVDGF 307
Query: 237 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
PISSEAERER++QCLEAAIERRASEG+ELELCTEDRVGLLSDITRIFRENSL IKRAEIS
Sbjct: 308 PISSEAERERLVQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEIS 367
Query: 297 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLG 356
T GK +DTFYVTDVTGNPVDPKIIDSIRRQIG L+VK ++ L+PKP + TT GF LG
Sbjct: 368 TEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPSQPTTIGFLLG 427
Query: 357 NFFKARTFQTFKLIRSYS 374
NFFKAR+FQ FKLIRSYS
Sbjct: 428 NFFKARSFQNFKLIRSYS 445
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 18/183 (9%)
Query: 179 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
N ++ TVI + S ++ +L D+V ++DM V+ +++ F + +G I
Sbjct: 22 NACENATVIQVDSVNKHGILLDVVQVISDMNLVITKAYISSDAVWFMDVFNVIDHNGNKI 81
Query: 239 SSEAERERVIQCLEA----AIERRASEGL-------ELELCTEDRVGLLSDITRIFRENS 287
+ + + + LE A R S G+ +EL DR GLLS+I + +
Sbjct: 82 RDKEVIDYIQRRLENNPSFAPSLRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLTDLH 141
Query: 288 LSIKRAEISTIGGKVKDTFYVTDVTGNPV--DPKIIDSIRRQI-----GHTKLQVKRSTI 340
++ AEI T + +VTD + DP + +IR + G + R+T+
Sbjct: 142 CNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRDLLSNVLRGSNDPKTARTTL 201
Query: 341 LAP 343
P
Sbjct: 202 SPP 204
>gi|225451503|ref|XP_002272024.1| PREDICTED: uncharacterized protein LOC100248040 [Vitis vinifera]
gi|296082319|emb|CBI21324.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 295/376 (78%), Positives = 327/376 (86%), Gaps = 5/376 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV+D DG KIRDK VI+YI + LE DASF P +R +VGVMP+E+HTSIE +GTDRP
Sbjct: 68 MDVFNVVDGDGNKIRDKGVINYITKTLERDASFVPPMRGTVGVMPSEDHTSIELSGTDRP 127
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVLADLHCNVVNAEIWTHN RAAAVVHVTD STG AI+DP RLS IKELL NV
Sbjct: 128 GLLSEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSTGCAIEDPNRLSKIKELLCNV 187
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA-VGRVEDKSSRPQVTVLN 179
L+G +D + AK +LSPPG +RERRLHQIMF DRDY+RVE+A +G+ DKSSRP VTVL+
Sbjct: 188 LKGNNDLKTAKMTLSPPGFTHRERRLHQIMFADRDYQRVERAELGK--DKSSRPHVTVLD 245
Query: 180 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
IEKDYTVITMRSKDRPKLLFD VCTLTDMQYVVFHG+V+TGR EAYQE+YIRHVDGLP+
Sbjct: 246 CIEKDYTVITMRSKDRPKLLFDTVCTLTDMQYVVFHGVVHTGRMEAYQEYYIRHVDGLPM 305
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SS+AERERVI+CLEAAIERRASEGLELEL TEDR GLLSDITR+FRENSL IKRAEIST
Sbjct: 306 SSDAERERVIECLEAAIERRASEGLELELRTEDRFGLLSDITRVFRENSLCIKRAEISTE 365
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNF 358
GGK KDTFYVTDVTGNPV+P+IIDSIR+QIGH+ LQVK S L+PK P+ETT F GN
Sbjct: 366 GGKAKDTFYVTDVTGNPVNPQIIDSIRQQIGHSILQVKNSN-LSPKAPQETTMSFLFGNI 424
Query: 359 FKARTFQTFKLIRSYS 374
FK RT Q FKLIRSYS
Sbjct: 425 FKCRTLQNFKLIRSYS 440
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 27/194 (13%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N ++ TVI + S ++ +L ++V LTDM V+ +++ F +
Sbjct: 15 PRVVIDNDASEEATVIQVDSVNKHGILLEVVQVLTDMNLVITKAYISSDGGWFMDVFNVV 74
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRAS---------------EGLELELCTEDRVGLL 276
DG I + VI + +ER AS + +EL DR GLL
Sbjct: 75 DGDGNKIRDKG----VINYITKTLERDASFVPPMRGTVGVMPSEDHTSIELSGTDRPGLL 130
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQI-----G 329
S++ + + ++ AEI T + +VT D TG + DP + I+ + G
Sbjct: 131 SEVCAVLADLHCNVVNAEIWTHNARAAAVVHVTDDSTGCAIEDPNRLSKIKELLCNVLKG 190
Query: 330 HTKLQVKRSTILAP 343
+ L+ + T+ P
Sbjct: 191 NNDLKTAKMTLSPP 204
>gi|356571573|ref|XP_003553951.1| PREDICTED: uncharacterized protein LOC100801859 [Glycine max]
Length = 445
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/379 (76%), Positives = 325/379 (85%), Gaps = 6/379 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNVID G KIRDKEVIDYIQ+RLE + SF PSLR SVGV+PTEEHT IE TGTDRP
Sbjct: 68 MDVFNVIDHKGNKIRDKEVIDYIQRRLENNPSFVPSLRESVGVVPTEEHTVIELTGTDRP 127
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+CAVL DLHCNVV AEIWTHN RAAAVVHVTD S+G AIKDP RLSTI++LL NV
Sbjct: 128 GLLSEICAVLTDLHCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIKDPSRLSTIRDLLSNV 187
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE----DKSSRPQVT 176
LRG +D + A+T+LSP G+ NR+RRLHQIMF DRDYER+E+A G+ E DK P VT
Sbjct: 188 LRGSNDPKTARTTLSPHGVTNRDRRLHQIMFADRDYERIERA-GQEELRDRDKRPLPHVT 246
Query: 177 VLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
V + +EKDYTV+TMR++DRPKLLFDIVCTLTDMQYVVFHG+V T R EA+QEFYIRHVDG
Sbjct: 247 VGDCVEKDYTVVTMRAQDRPKLLFDIVCTLTDMQYVVFHGVVKTLRMEAFQEFYIRHVDG 306
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
PISSEAERER++QCLEAAIERRASEG+ LELCTEDRVGLLSDITR FRENSL IKRAEI
Sbjct: 307 FPISSEAERERLMQCLEAAIERRASEGMGLELCTEDRVGLLSDITRTFRENSLCIKRAEI 366
Query: 296 STIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFL 355
ST GK +DTFYVTDVTGNPVDPKIIDSIRRQIG L+VK ++ L+PKPP+ TT GF L
Sbjct: 367 STEEGKARDTFYVTDVTGNPVDPKIIDSIRRQIGDKVLKVKHNSNLSPKPPQPTTIGFLL 426
Query: 356 GNFFKARTFQTFKLIRSYS 374
GNFFKAR+FQ FKLI+SYS
Sbjct: 427 GNFFKARSFQNFKLIKSYS 445
>gi|357503685|ref|XP_003622131.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497146|gb|AES78349.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 442
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 291/375 (77%), Positives = 320/375 (85%), Gaps = 1/375 (0%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D +G KI+DKEVIDYIQ+RLE + SF S+R SVGV+PTEEHT IE TGTDRP
Sbjct: 68 MDVFNVTDRNGNKIKDKEVIDYIQRRLEKNPSFETSMRESVGVVPTEEHTVIELTGTDRP 127
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+CAVLADL CNVV AEIWTHN RAAAVVHVTD S+G AI+DP RLSTI++LL NV
Sbjct: 128 GLLSEICAVLADLRCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIRDLLCNV 187
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
LRG DD + AKT+LS PG+ R+RRLHQIMF DRDYERVE+A R DK P VTV +
Sbjct: 188 LRGSDDPKTAKTALSHPGVTYRDRRLHQIMFADRDYERVERAGLRERDKGPFPHVTVSDC 247
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
E+DYTV+ MR+KDRPKLLFDIVCTLTDMQYVVFHG+V T RT AYQEFYIRHVDG PIS
Sbjct: 248 TERDYTVVIMRAKDRPKLLFDIVCTLTDMQYVVFHGVVQTERTGAYQEFYIRHVDGFPIS 307
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAERER+IQCLEAAIERRASEG+ELELCTEDRVGLLSDITRIFRENSL IKRAEIST
Sbjct: 308 SEAERERLIQCLEAAIERRASEGMELELCTEDRVGLLSDITRIFRENSLCIKRAEISTEN 367
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK KDTFYVTDVTGNPVDPK IDSIRRQIG T LQVK ++ L+PKPP+ TT GF G+FF
Sbjct: 368 GKAKDTFYVTDVTGNPVDPKSIDSIRRQIGDTVLQVKHNSSLSPKPPQGTTIGFLFGSFF 427
Query: 360 KARTFQTFKLIRSYS 374
KAR+FQ FKLIRSYS
Sbjct: 428 KARSFQNFKLIRSYS 442
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 328
G+L D+ ++ + +L IK+A IS+ G D F VTD GN + D ++ID I+R++
Sbjct: 39 GILLDVVQVISDMNLVIKKAYISSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQRRL 94
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 21/164 (12%)
Query: 179 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
N ++ TVI + S ++ +L D+V ++DM V+ +++ F + +G I
Sbjct: 22 NACENATVIQVDSVNKHGILLDVVQVISDMNLVIKKAYISSDGVWFMDVFNVTDRNGNKI 81
Query: 239 SSEAERERVIQCLEAAIERRAS---------------EGLELELCTEDRVGLLSDITRIF 283
+ VI ++ +E+ S E +EL DR GLLS+I +
Sbjct: 82 KD----KEVIDYIQRRLEKNPSFETSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVL 137
Query: 284 RENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV--DPKIIDSIR 325
+ ++ AEI T + +VTD + DP + +IR
Sbjct: 138 ADLRCNVVTAEIWTHNTRAAAVVHVTDDSSGCAIEDPSRLSTIR 181
>gi|357503687|ref|XP_003622132.1| Amino acid binding protein, putative [Medicago truncatula]
gi|355497147|gb|AES78350.1| Amino acid binding protein, putative [Medicago truncatula]
Length = 475
Score = 570 bits (1470), Expect = e-160, Method: Compositional matrix adjust.
Identities = 291/408 (71%), Positives = 320/408 (78%), Gaps = 34/408 (8%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQ---------------------------------RL 27
MDVFNV D +G KI+DKEVIDYIQ+ RL
Sbjct: 68 MDVFNVTDRNGNKIKDKEVIDYIQRVGSCLFAISRMLQLTLIYVARSLWKGDFTVLYHRL 127
Query: 28 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 87
E + SF S+R SVGV+PTEEHT IE TGTDRPGL SE+CAVLADL CNVV AEIWTHN
Sbjct: 128 EKNPSFETSMRESVGVVPTEEHTVIELTGTDRPGLLSEICAVLADLRCNVVTAEIWTHNT 187
Query: 88 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 147
RAAAVVHVTD S+G AI+DP RLSTI++LL NVLRG DD + AKT+LS PG+ R+RRLH
Sbjct: 188 RAAAVVHVTDDSSGCAIEDPSRLSTIRDLLCNVLRGSDDPKTAKTALSHPGVTYRDRRLH 247
Query: 148 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLT 206
QIMF DRDYERVE+A R DK P VTV + E+DYTV+ MR+KDRPKLLFDIVCTLT
Sbjct: 248 QIMFADRDYERVERAGLRERDKGPFPHVTVSDCTERDYTVVIMRAKDRPKLLFDIVCTLT 307
Query: 207 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELE 266
DMQYVVFHG+V T RT AYQEFYIRHVDG PISSEAERER+IQCLEAAIERRASEG+ELE
Sbjct: 308 DMQYVVFHGVVQTERTGAYQEFYIRHVDGFPISSEAERERLIQCLEAAIERRASEGMELE 367
Query: 267 LCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRR 326
LCTEDRVGLLSDITRIFRENSL IKRAEIST GK KDTFYVTDVTGNPVDPK IDSIRR
Sbjct: 368 LCTEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGNPVDPKSIDSIRR 427
Query: 327 QIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 374
QIG T LQVK ++ L+PKPP+ TT GF G+FFKAR+FQ FKLIRSYS
Sbjct: 428 QIGDTVLQVKHNSSLSPKPPQGTTIGFLFGSFFKARSFQNFKLIRSYS 475
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIGHTK 332
G+L D+ ++ + +L IK+A IS+ G D F VTD GN + D ++ID I+R +G
Sbjct: 39 GILLDVVQVISDMNLVIKKAYISSDGVWFMDVFNVTDRNGNKIKDKEVIDYIQR-VGSCL 97
Query: 333 LQVKR 337
+ R
Sbjct: 98 FAISR 102
>gi|449490057|ref|XP_004158495.1| PREDICTED: uncharacterized protein LOC101225681 [Cucumis sativus]
Length = 440
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 271/375 (72%), Positives = 313/375 (83%), Gaps = 3/375 (0%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNVI +G KIRD+EVI+ IQ RLE ASF PSLR SVGVMP+E+HTSIE +GTDRP
Sbjct: 68 MDVFNVITYEGNKIRDQEVINAIQMRLE--ASFVPSLRESVGVMPSEDHTSIELSGTDRP 125
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVLADLHCNVVNA++WTHN+RAAAVVHVTD +TG AI DP+RL TIKELL NV
Sbjct: 126 GLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTIKELLCNV 185
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
LRG + ++AK +LSPPG+ + +RRLHQIM DRDYER K VEDK+ RP VTV +
Sbjct: 186 LRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRPHVTVFDC 245
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
EKDYT+IT R++DRPKLLFD++CTLTDM+YVVFHGMV TGR EA+ EFYIRH DGLPIS
Sbjct: 246 TEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEAFLEFYIRHKDGLPIS 305
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
S+AER+RV+ CLEAAIERR SEGL+LELC EDRVGLLSDITRIFRENSL I+RAEI+T
Sbjct: 306 SKAERDRVLHCLEAAIERRESEGLKLELCAEDRVGLLSDITRIFRENSLCIRRAEIATKR 365
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK KD FYVTD+TG +D K+++SIR+QIG LQVK ++ L+ PPKE T GFFLG FF
Sbjct: 366 GKAKDIFYVTDMTGTTIDAKVVESIRKQIGDAMLQVKHNSCLSETPPKEMTAGFFLGYFF 425
Query: 360 KARTFQTFKLIRSYS 374
KARTFQ FKLIRSYS
Sbjct: 426 KARTFQNFKLIRSYS 440
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 179 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
N KD TVI + S ++ +L +V L DM ++ +++ F + +G I
Sbjct: 22 NACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYISSDGGWFMDVFNVITYEGNKI 81
Query: 239 SSEAERERVIQCLEAAI--ERRASEGL-------ELELCTEDRVGLLSDITRIFRENSLS 289
+ + LEA+ R S G+ +EL DR GLLS++ + + +
Sbjct: 82 RDQEVINAIQMRLEASFVPSLRESVGVMPSEDHTSIELSGTDRPGLLSEVCAVLADLHCN 141
Query: 290 IKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQI-----GHTKLQVKRSTILA 342
+ A++ T + +VT D TG + DP+ + +I+ + G+ +L+ + T+
Sbjct: 142 VVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTIKELLCNVLRGNGELKEAKMTL-- 199
Query: 343 PKPPKETTT 351
PP T+T
Sbjct: 200 -SPPGVTST 207
>gi|449441712|ref|XP_004138626.1| PREDICTED: uncharacterized protein LOC101213097 [Cucumis sativus]
Length = 445
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 271/380 (71%), Positives = 314/380 (82%), Gaps = 8/380 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNVI +G KIRD+EVI+ IQ RLE ASF PSLR SVGVMP+E+HTSIE +GTDRP
Sbjct: 68 MDVFNVITYEGNKIRDQEVINAIQMRLE--ASFVPSLRESVGVMPSEDHTSIELSGTDRP 125
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVLADLHCNVVNA++WTHN+RAAAVVHVTD +TG AI DP+RL TIKELL NV
Sbjct: 126 GLLSEVCAVLADLHCNVVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTIKELLCNV 185
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
LRG + ++AK +LSPPG+ + +RRLHQIM DRDYER K VEDK+ RP VTV +
Sbjct: 186 LRGNGELKEAKMTLSPPGVTSTDRRLHQIMLADRDYERAVKTKLEVEDKNLRPHVTVFDC 245
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-----AYQEFYIRHVD 234
EKDYT+IT R++DRPKLLFD++CTLTDM+YVVFHGMV TGR E ++QEFYIRH D
Sbjct: 246 TEKDYTLITTRTRDRPKLLFDVLCTLTDMEYVVFHGMVETGRMEENWSFSFQEFYIRHKD 305
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
GLPISS+AER+RV+ CLEAAIERR SEGL+LELC EDRVGLLSDITRIFRENSL I+RAE
Sbjct: 306 GLPISSKAERDRVLHCLEAAIERRESEGLKLELCAEDRVGLLSDITRIFRENSLCIRRAE 365
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 354
I+T GK KD FYVTD+TG +D K+++SIR+QIG LQVK ++ L+ PPKE T GFF
Sbjct: 366 IATKRGKAKDIFYVTDMTGTTIDAKVVESIRKQIGDAMLQVKHNSCLSETPPKEMTAGFF 425
Query: 355 LGNFFKARTFQTFKLIRSYS 374
LG FFKARTFQ FKLIRSYS
Sbjct: 426 LGYFFKARTFQNFKLIRSYS 445
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 19/189 (10%)
Query: 179 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
N KD TVI + S ++ +L +V L DM ++ +++ F + +G I
Sbjct: 22 NACKDATVIQVDSMNKHGILLKVVQVLMDMNLIITKAYISSDGGWFMDVFNVITYEGNKI 81
Query: 239 SSEAERERVIQCLEAAI--ERRASEGL-------ELELCTEDRVGLLSDITRIFRENSLS 289
+ + LEA+ R S G+ +EL DR GLLS++ + + +
Sbjct: 82 RDQEVINAIQMRLEASFVPSLRESVGVMPSEDHTSIELSGTDRPGLLSEVCAVLADLHCN 141
Query: 290 IKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQI-----GHTKLQVKRSTILA 342
+ A++ T + +VT D TG + DP+ + +I+ + G+ +L+ + T+
Sbjct: 142 VVNADVWTHNNRAAAVVHVTDDATGRAINDPQRLLTIKELLCNVLRGNGELKEAKMTL-- 199
Query: 343 PKPPKETTT 351
PP T+T
Sbjct: 200 -SPPGVTST 207
>gi|297832736|ref|XP_002884250.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
gi|297330090|gb|EFH60509.1| hypothetical protein ARALYDRAFT_477311 [Arabidopsis lyrata subsp.
lyrata]
Length = 442
Score = 530 bits (1365), Expect = e-148, Method: Compositional matrix adjust.
Identities = 268/379 (70%), Positives = 308/379 (81%), Gaps = 10/379 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS-FAPSLRSSVGVMPTEEHTSIEFTGTDR 59
MDVF VID DG KIRD +V+DYIQ+R+E++A F P LRSSVGVMPT+E+T+IE GTDR
Sbjct: 69 MDVFKVIDQDGNKIRDTQVLDYIQRRIESNAGWFIPPLRSSVGVMPTDEYTAIELAGTDR 128
Query: 60 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119
PGL SEV AVL DLHCNVVNAEIWTHN RAAAV+HVTD+ T AI DP RLSTIKELL N
Sbjct: 129 PGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNLTNSAITDPIRLSTIKELLCN 188
Query: 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
V+R R AKT S +RERRLHQIMFDDRDYE V++A + +SRP VT++N
Sbjct: 189 VVRTNSGSRAAKTVFSCSD-THRERRLHQIMFDDRDYEGVKRA----KTSASRPSVTLMN 243
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
IEKDYTV+TMRSKDRPKL+FD+VCTLTDMQYVVFHGMV+T EAYQEFYIRHVDGLPI+
Sbjct: 244 IEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPIN 303
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAE+ERVIQCLEAAIERRASEGLELEL EDRVGLLSDITR FRENSL+I RAEIST
Sbjct: 304 SEAEQERVIQCLEAAIERRASEGLELELSAEDRVGLLSDITRTFRENSLTIVRAEISTRE 363
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR----STILAPKPPKETTTGFFL 355
GK KDTFYVTDVTGNPV+ KI++SIR+QIG +KL+VK+ S + +P ETT G+ L
Sbjct: 364 GKAKDTFYVTDVTGNPVESKIVESIRQQIGVSKLKVKKKEDCSVLGTSRPSHETTMGYLL 423
Query: 356 GNFFKARTFQTFKLIRSYS 374
N FK ++ Q+FKL S+S
Sbjct: 424 SNIFKPKSLQSFKLHLSHS 442
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 67/163 (41%), Gaps = 23/163 (14%)
Query: 179 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
N D TVI + S ++ L ++V LTDM V+ +++ F + DG I
Sbjct: 23 NASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISSDGGWFMDVFKVIDQDGNKI 82
Query: 239 SSEAERERVIQCLEAAIERRAS----------------EGLELELCTEDRVGLLSDITRI 282
+V+ ++ IE A E +EL DR GLLS+++ +
Sbjct: 83 RD----TQVLDYIQRRIESNAGWFIPPLRSSVGVMPTDEYTAIELAGTDRPGLLSEVSAV 138
Query: 283 FRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIR 325
+ ++ AEI T + +VTD N + I D IR
Sbjct: 139 LTDLHCNVVNAEIWTHNTRAAAVIHVTD---NLTNSAITDPIR 178
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 328
G L ++ ++ + +L IK+A IS+ GG D F V D GN + D +++D I+R+I
Sbjct: 40 GTLLEVVQVLTDMNLVIKKAYISSDGGWFMDVFKVIDQDGNKIRDTQVLDYIQRRI 95
>gi|225456388|ref|XP_002280377.1| PREDICTED: uncharacterized protein LOC100256112 [Vitis vinifera]
gi|297734456|emb|CBI15703.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 510 bits (1314), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/377 (67%), Positives = 300/377 (79%), Gaps = 7/377 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+RD+E+++Y+Q+ LET+A F SLR SVGVMP++E TSIE TG+DRP
Sbjct: 68 MDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIELTGSDRP 127
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL DL CNVVNAEIWTHN RAAAV+HVTD +TG AI+DPKRLS IK+ L NV
Sbjct: 128 GLLSEVSAVLTDLRCNVVNAEIWTHNARAAAVIHVTDQATGCAIEDPKRLSMIKKRLGNV 187
Query: 121 LRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL 178
+G FR K ++S PG MNR+RRLHQ+MF RD+ER+E V+DK+SRP VTVL
Sbjct: 188 FKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEY----VQDKNSRPHVTVL 243
Query: 179 NI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 237
+ ++DYTV+T+RS+DRPKLLFD VC LTDMQYVVFHG V TGR EAYQE YIRHVDGLP
Sbjct: 244 DCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYIRHVDGLP 303
Query: 238 ISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297
+ SEAER+RV +CLEAAIERRA EGL LEL TEDR GLLSD+TR+FREN L IKRA I+T
Sbjct: 304 LRSEAERQRVTECLEAAIERRAWEGLVLELSTEDRFGLLSDVTRVFRENGLCIKRAVITT 363
Query: 298 IGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGN 357
GK KDTF+VTDV+GN VD K ++ IR+QIG T L+VK + +PK P+E T F GN
Sbjct: 364 KCGKAKDTFFVTDVSGNTVDSKTVEMIRQQIGQTILRVKGNLNFSPKLPQEGTRSFPFGN 423
Query: 358 FFKARTFQTFKLIRSYS 374
FK R+FQTFKLI+SYS
Sbjct: 424 LFKGRSFQTFKLIKSYS 440
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 26/209 (12%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 244
TVI + S +R +L +V LTD+ ++ +++ F + DG ++
Sbjct: 28 TVIEVDSANRHGILLQVVQVLTDLNLIITKAYISSDGGWFMDVFNVTDHDG----NKLRD 83
Query: 245 ERVIQCLEAAIERRAS---------------EGLELELCTEDRVGLLSDITRIFRENSLS 289
E ++ L+ +E A E +EL DR GLLS+++ + + +
Sbjct: 84 EEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIELTGSDRPGLLSEVSAVLTDLRCN 143
Query: 290 IKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRRQI-----GHTKLQVKRSTILA 342
+ AEI T + +VTD TG + DPK + I++++ G++ + + TI +
Sbjct: 144 VVNAEIWTHNARAAAVIHVTDQATGCAIEDPKRLSMIKKRLGNVFKGNSSFRTPKMTISS 203
Query: 343 PKPPKETTTGFFLGNFFKARTFQTFKLIR 371
P P F AR F+ + ++
Sbjct: 204 PGPVAMNRDRRLHQMMFAARDFERLEYVQ 232
>gi|147858899|emb|CAN80840.1| hypothetical protein VITISV_043834 [Vitis vinifera]
Length = 440
Score = 508 bits (1309), Expect = e-141, Method: Compositional matrix adjust.
Identities = 252/377 (66%), Positives = 298/377 (79%), Gaps = 7/377 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+RD+E+++Y+Q+ LET+A F SLR SVGVMP++E TSIE TG+DRP
Sbjct: 68 MDVFNVTDHDGNKLRDEEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIELTGSDRP 127
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL DL CNVVNAEIWTHN RAAAV+HVTD +TG AI+DPKRLS IK+ L NV
Sbjct: 128 GLLSEVSAVLTDLRCNVVNAEIWTHNXRAAAVIHVTDQATGCAIEDPKRLSMIKKRLGNV 187
Query: 121 LRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL 178
+G FR K ++S PG MNR+RRLHQ+MF RD+ER+E A +D +SRP VTVL
Sbjct: 188 FKGNSSFRTPKMTISSPGPVAMNRDRRLHQMMFAARDFERLEYA----QDTNSRPHVTVL 243
Query: 179 NI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 237
+ ++DYTV+T+RS+DRPKLLFD VC LTDMQYVVFHG V TGR EAYQE YIRHVDGLP
Sbjct: 244 DCSDRDYTVVTIRSRDRPKLLFDTVCALTDMQYVVFHGTVITGRMEAYQEHYIRHVDGLP 303
Query: 238 ISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297
+ SEAER+RV +CLEAAIERRA EGL LEL TEDR GLLSD+TR+FREN L IKRA I+T
Sbjct: 304 LRSEAERQRVTECLEAAIERRAWEGLVLELSTEDRFGLLSDVTRVFRENGLCIKRAVITT 363
Query: 298 IGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGN 357
GK KDTF+VTDV+GN VD K ++ IR+QIG T L+VK + +PK P E T F GN
Sbjct: 364 KCGKAKDTFFVTDVSGNXVDSKTVEMIRQQIGQTILRVKGNLNFSPKLPXEGTRSFXFGN 423
Query: 358 FFKARTFQTFKLIRSYS 374
FK R+FQTFKLI+SYS
Sbjct: 424 LFKGRSFQTFKLIKSYS 440
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 87/203 (42%), Gaps = 26/203 (12%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 244
TVI + S +R +L +V LTD+ ++ +++ F + DG ++
Sbjct: 28 TVIEVDSANRHGILLQVVQVLTDLNLIITKAYISSDGGWFMDVFNVTDHDG----NKLRD 83
Query: 245 ERVIQCLEAAIERRAS---------------EGLELELCTEDRVGLLSDITRIFRENSLS 289
E ++ L+ +E A E +EL DR GLLS+++ + + +
Sbjct: 84 EEILNYLQKTLETEAGFLNSLRGSVGVMPSKEDTSIELTGSDRPGLLSEVSAVLTDLRCN 143
Query: 290 IKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRRQI-----GHTKLQVKRSTILA 342
+ AEI T + +VTD TG + DPK + I++++ G++ + + TI +
Sbjct: 144 VVNAEIWTHNXRAAAVIHVTDQATGCAIEDPKRLSMIKKRLGNVFKGNSSFRTPKMTISS 203
Query: 343 PKPPKETTTGFFLGNFFKARTFQ 365
P P F AR F+
Sbjct: 204 PGPVAMNRDRRLHQMMFAARDFE 226
>gi|15232835|ref|NP_186848.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
gi|6513932|gb|AAF14836.1|AC011664_18 unknown protein [Arabidopsis thaliana]
gi|22138102|gb|AAM93431.1| ACR6 [Arabidopsis thaliana]
gi|26451489|dbj|BAC42843.1| unknown protein [Arabidopsis thaliana]
gi|28973303|gb|AAO63976.1| unknown protein [Arabidopsis thaliana]
gi|332640226|gb|AEE73747.1| ACT domain-containing protein 6 [Arabidopsis thaliana]
Length = 433
Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust.
Identities = 265/370 (71%), Positives = 300/370 (81%), Gaps = 13/370 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS-FAPSLRSSVGVMPTEEHTSIEFTGTDR 59
MDVF VID DG KIRD +V+DYIQ+R+E++A F P LRSSVGVMPT+E+TSIE GTDR
Sbjct: 69 MDVFKVIDQDGNKIRDTQVLDYIQKRIESNAGWFIPPLRSSVGVMPTDEYTSIELAGTDR 128
Query: 60 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119
PGL SEV AVL DLHCNVVNAEIWTHN RAAAV+HVTD+ST AI DP RLSTIKELL N
Sbjct: 129 PGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDPIRLSTIKELLCN 188
Query: 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
V+R R AKT S +RERRLHQIMFDDRDYE V++A +SRP VT++N
Sbjct: 189 VVRTNSGSRAAKTVFSCSD-THRERRLHQIMFDDRDYEGVKRA----RTSASRPSVTLMN 243
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
IEKDYTV+TMRSKDRPKL+FD+VCTLTDMQYVVFHGMV+T EAYQEFYIRHVDGLPI+
Sbjct: 244 IEKDYTVVTMRSKDRPKLVFDVVCTLTDMQYVVFHGMVSTEPVEAYQEFYIRHVDGLPIN 303
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAE+ERVIQCLEAAIERRASEGLELEL EDRVGLLSDITR FRENSL+I RAEIST
Sbjct: 304 SEAEQERVIQCLEAAIERRASEGLELELSAEDRVGLLSDITRTFRENSLTIVRAEISTRE 363
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR------STILAPKPPKETTT-G 352
GK KDTFYVTDVTGNPV+ KI++SIR+QIG +KL+VK+ S + +P ETTT G
Sbjct: 364 GKAKDTFYVTDVTGNPVESKIVESIRQQIGVSKLKVKKKEKEHCSVLGTSRPSHETTTMG 423
Query: 353 FFLGNFFKAR 362
+ L N FK +
Sbjct: 424 YLLSNIFKPK 433
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 66/163 (40%), Gaps = 23/163 (14%)
Query: 179 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
N D TVI + S ++ L ++V LTDM V+ +++ F + DG I
Sbjct: 23 NASDDATVIQVDSVNKHGTLLEVVQVLTDMNLVIKKAYISSDGGWFMDVFKVIDQDGNKI 82
Query: 239 SSEAERERVIQCLEAAIERRAS----------------EGLELELCTEDRVGLLSDITRI 282
+V+ ++ IE A E +EL DR GLLS+++ +
Sbjct: 83 RD----TQVLDYIQKRIESNAGWFIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAV 138
Query: 283 FRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIR 325
+ ++ AEI T + +VTD N I D IR
Sbjct: 139 LTDLHCNVVNAEIWTHNTRAAAVIHVTD---NSTHSAITDPIR 178
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 328
G L ++ ++ + +L IK+A IS+ GG D F V D GN + D +++D I+++I
Sbjct: 40 GTLLEVVQVLTDMNLVIKKAYISSDGGWFMDVFKVIDQDGNKIRDTQVLDYIQKRI 95
>gi|6091737|gb|AAF03449.1|AC010797_25 unknown protein [Arabidopsis thaliana]
Length = 462
Score = 493 bits (1268), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/399 (66%), Positives = 300/399 (75%), Gaps = 42/399 (10%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQ-----------------------------QRLETDA 31
MDVF VID DG KIRD +V+DYIQ QR+E++A
Sbjct: 69 MDVFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQRIESNA 128
Query: 32 S-FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 90
F P LRSSVGVMPT+E+TSIE GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAA
Sbjct: 129 GWFIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAA 188
Query: 91 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 150
AV+HVTD+ST AI DP RLSTIKELL NV+R R AKT S +RERRLHQIM
Sbjct: 189 AVIHVTDNSTHSAITDPIRLSTIKELLCNVVRTNSGSRAAKTVFSCSD-THRERRLHQIM 247
Query: 151 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQY 210
FDDRDYE V++A +SRP VT++NIEKDYTV+TMRSKDRPKL+FD+VCTLTDMQY
Sbjct: 248 FDDRDYEGVKRA----RTSASRPSVTLMNIEKDYTVVTMRSKDRPKLVFDVVCTLTDMQY 303
Query: 211 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTE 270
VVFHGMV+T EAYQEFYIRHVDGLPI+SEAE+ERVIQCLEAAIERRASEGLELEL E
Sbjct: 304 VVFHGMVSTEPVEAYQEFYIRHVDGLPINSEAEQERVIQCLEAAIERRASEGLELELSAE 363
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 330
DRVGLLSDITR FRENSL+I RAEIST GK KDTFYVTDVTGNPV+ KI++SIR+QIG
Sbjct: 364 DRVGLLSDITRTFRENSLTIVRAEISTREGKAKDTFYVTDVTGNPVESKIVESIRQQIGV 423
Query: 331 TKLQVKR------STILAPKPPKETTT-GFFLGNFFKAR 362
+KL+VK+ S + +P ETTT G+ L N FK +
Sbjct: 424 SKLKVKKKEKEHCSVLGTSRPSHETTTMGYLLSNIFKPK 462
>gi|255540149|ref|XP_002511139.1| amino acid binding protein, putative [Ricinus communis]
gi|223550254|gb|EEF51741.1| amino acid binding protein, putative [Ricinus communis]
Length = 452
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 233/386 (60%), Positives = 280/386 (72%), Gaps = 16/386 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF V DG K+ D+ +++YI++ LE D S+RSS+ ++P++EHTSIE +GTDRP
Sbjct: 71 MDVFYVTGNDGNKVEDESILNYIKKALERDGHVVNSIRSSIAMLPSKEHTSIELSGTDRP 130
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL DL C+VVNAEIWTHN R AA++H+T+ STG A+++PKRLS IKELL NV
Sbjct: 131 GLLSEVSAVLTDLGCSVVNAEIWTHNFRVAAIMHITEQSTGCAVEEPKRLSLIKELLRNV 190
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G FR K S+S P + RRLHQ+MF RD+ER+E A ++K P V V +
Sbjct: 191 LKGNSTFRSPKVSISSPEETHIGRRLHQMMFAARDFERLESA----KEKGVEPCVIVSDC 246
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+KDYTV+T+R DRPKLLFD V LTDMQYVVFHG V TG EAYQE+YIRHVDGLPIS
Sbjct: 247 ADKDYTVVTVRCIDRPKLLFDTVFALTDMQYVVFHGTVITGGKEAYQEYYIRHVDGLPIS 306
Query: 240 SEAERERVIQCLEAAIERRASE-----------GLELELCTEDRVGLLSDITRIFRENSL 288
SEAER+RV +CLEAAIERRASE GLELELCT+DR GLLSDITRIFREN L
Sbjct: 307 SEAERQRVTECLEAAIERRASERYTHRNVTLSQGLELELCTDDRFGLLSDITRIFRENGL 366
Query: 289 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 348
SI+RAEIST GK KDTF+VTDV GN VDP + IR QIG T L K + K P+E
Sbjct: 367 SIQRAEISTKNGKAKDTFFVTDVAGNSVDPTTVRMIREQIGQTILHAKGKLNVLSKFPQE 426
Query: 349 TTTGFFLGNFFKARTFQTFKLIRSYS 374
T F G+FFK R+F F L++SYS
Sbjct: 427 TPRSFLFGSFFKGRSFHHFGLVKSYS 452
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 153 DRDYERVEKAVGRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYV 211
D D + K + R+ + P+V + N ++ T++ + + +R L +V LTD+ +
Sbjct: 2 DDDVDEYAKLIRRM----NSPRVVIDNDACEHATIVQVDTLNRYGTLLQVVQVLTDLNLI 57
Query: 212 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER--------RAS--- 260
+ +++ FY+ DG ++ E E ++ ++ A+ER R+S
Sbjct: 58 ITKAYISSDGVWFMDVFYVTGNDG----NKVEDESILNYIKKALERDGHVVNSIRSSIAM 113
Query: 261 ----EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNP 315
E +EL DR GLLS+++ + + S+ AEI T +V ++T+ TG
Sbjct: 114 LPSKEHTSIELSGTDRPGLLSEVSAVLTDLGCSVVNAEIWTHNFRVAAIMHITEQSTGCA 173
Query: 316 V-DPKIIDSIRRQIGHTKLQVKRSTILAPK----PPKETTTGFFLGN-FFKARTFQ 365
V +PK + I+ + + ST +PK P+ET G L F AR F+
Sbjct: 174 VEEPKRLSLIKELL--RNVLKGNSTFRSPKVSISSPEETHIGRRLHQMMFAARDFE 227
>gi|224101597|ref|XP_002312346.1| predicted protein [Populus trichocarpa]
gi|222852166|gb|EEE89713.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 450 bits (1158), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/375 (59%), Positives = 283/375 (75%), Gaps = 6/375 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ ++DYI + L T++ F S+ S GV + +HT+IE TG+DRP
Sbjct: 74 MDVFNVTDQDGNKVTDEAILDYITKSLGTESCFTSSM-GSFGVKQSIDHTAIELTGSDRP 132
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLA L CNV+NAE+WTHN RAAAV+ VTD TG AI DP++LS +KELL NV
Sbjct: 133 GLLSEVSAVLAHLKCNVLNAEVWTHNMRAAAVMQVTDDETGSAITDPEKLSRVKELLCNV 192
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G + +R A+T +S G+ + ERRLHQ+MF DRDYER A V D+ RP V+V+N
Sbjct: 193 LKGSNKYRGARTVVSH-GVTHTERRLHQMMFADRDYER---ANNDVLDEKQRPNVSVVNW 248
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
EKDY+VIT+RSKDRPKLLFD VCTLTDM+YVVFH ++ EA+QE+YI+HVDG P+
Sbjct: 249 YEKDYSVITIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKHVDGSPVK 308
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+R+IQCLEAAIERR SEGL+LELCT+DR+GLLSD+TRIFRENSL++ RAE++T
Sbjct: 309 SEAERQRIIQCLEAAIERRVSEGLKLELCTKDRIGLLSDVTRIFRENSLTVTRAEVTTRA 368
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK +TFYV+D +G PVD K IDSIR+ G T L+VK S +E+ T F G F
Sbjct: 369 GKAVNTFYVSDASGYPVDAKTIDSIRQATGQTILKVKGSPEELKPVSQESPTRFLFGGLF 428
Query: 360 KARTFQTFKLIRSYS 374
K+R+F F L++SYS
Sbjct: 429 KSRSFVNFGLVKSYS 443
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K+ TVI + S ++ L ++V LTD+ ++ V++ F +
Sbjct: 21 PRVVIDNEACKNATVIRVDSANKHGKLLEVVQVLTDLNLIITKAYVSSDGGWFMDVFNVT 80
Query: 232 HVDGLPISSEAERERVIQ------CLEAAIE----RRASEGLELELCTEDRVGLLSDITR 281
DG ++ EA + + + C +++ +++ + +EL DR GLLS+++
Sbjct: 81 DQDGNKVTDEAILDYITKSLGTESCFTSSMGSFGVKQSIDHTAIELTGSDRPGLLSEVSA 140
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIR 325
+ ++ AE+ T + VT D TG+ + DP+ + ++
Sbjct: 141 VLAHLKCNVLNAEVWTHNMRAAAVMQVTDDETGSAITDPEKLSRVK 186
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G L ++ ++ + +L I +A +S+ GG D F VTD GN V D I+D I +
Sbjct: 40 SANKHGKLLEVVQVLTDLNLIITKAYVSSDGGWFMDVFNVTDQDGNKVTDEAILDYITKS 99
Query: 328 IG 329
+G
Sbjct: 100 LG 101
>gi|224108635|ref|XP_002314917.1| predicted protein [Populus trichocarpa]
gi|222863957|gb|EEF01088.1| predicted protein [Populus trichocarpa]
Length = 443
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 226/375 (60%), Positives = 280/375 (74%), Gaps = 6/375 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ ++DYI + L ++ F S+RS VGV + +HT+IE TG+DRP
Sbjct: 74 MDVFNVTDPDGNKVTDEAILDYITKSLGPESCFTSSMRS-VGVKQSMDHTAIELTGSDRP 132
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL L CNVVNAE+WTHN RAAAV+ VTD TG AI DP++LS IKELL NV
Sbjct: 133 GLLSEVSAVLTHLKCNVVNAEVWTHNMRAAAVMQVTDEETGSAIIDPEKLSRIKELLCNV 192
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G + R AKT +S G+ + ERRLHQ+MF DRDYER A D+ RP V+V+N
Sbjct: 193 LKGSNKSRGAKTVVSH-GVTHTERRLHQMMFADRDYER---ANNDELDEKQRPNVSVVNW 248
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
EKDY+V+T+ SKDRPKLLFD VCTLTDM+YVVFH ++ EA+QE+YI+H+DG P+
Sbjct: 249 CEKDYSVVTITSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAHQEYYIKHIDGSPVK 308
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+R+IQCLEAAIERR SEGL+LELCT DRVGLLSD+TRIFRENSL++ RAE++T
Sbjct: 309 SEAERQRIIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVTTRA 368
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK +TFYV+D +G PVD K IDSIR+ IG T L+VK S +E+ T F G F
Sbjct: 369 GKAVNTFYVSDASGYPVDAKTIDSIRQAIGQTILKVKSSPEEQKPVSQESPTRFLFGGLF 428
Query: 360 KARTFQTFKLIRSYS 374
K+R+F F L+RSYS
Sbjct: 429 KSRSFVNFGLVRSYS 443
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K+ TVI + S ++ +L ++V LTD+ ++ +++ F +
Sbjct: 21 PRVVIDNEACKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYISSDGGWFMDVFNVT 80
Query: 232 HVDGLPISSEAERERVIQ------CLEAAIE----RRASEGLELELCTEDRVGLLSDITR 281
DG ++ EA + + + C +++ +++ + +EL DR GLLS+++
Sbjct: 81 DPDGNKVTDEAILDYITKSLGPESCFTSSMRSVGVKQSMDHTAIELTGSDRPGLLSEVSA 140
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNP-VDPKIIDSIR 325
+ ++ AE+ T + VTD TG+ +DP+ + I+
Sbjct: 141 VLTHLKCNVVNAEVWTHNMRAAAVMQVTDEETGSAIIDPEKLSRIK 186
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ ++ + +L I +A IS+ GG D F VTD GN V D I+D I +
Sbjct: 40 SANKHGILLEVVQVLTDLNLIITKAYISSDGGWFMDVFNVTDPDGNKVTDEAILDYITKS 99
Query: 328 IG 329
+G
Sbjct: 100 LG 101
>gi|255541934|ref|XP_002512031.1| amino acid binding protein, putative [Ricinus communis]
gi|223549211|gb|EEF50700.1| amino acid binding protein, putative [Ricinus communis]
Length = 443
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 228/375 (60%), Positives = 283/375 (75%), Gaps = 6/375 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG KI D+ ++DYI++ L ++ F S+RS VGV+P+ +HTSIE TG+DRP
Sbjct: 74 MDVFNVRDQDGNKITDEAILDYIRKSLGPESRFTSSMRS-VGVIPSMDHTSIELTGSDRP 132
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL L CNVV+AE+WTHN RAAAV+ VTD TG AI DP+RLS IKELL NV
Sbjct: 133 GLLSELSAVLTHLKCNVVSAEVWTHNMRAAAVMQVTDEETGSAIIDPERLSRIKELLCNV 192
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G + FR AKT +S G+ + ERRLHQ+MF DRDYER + V D+ RP V+V+N
Sbjct: 193 LKGSNKFRGAKTVVSH-GVTHTERRLHQMMFADRDYERADD---EVLDEKQRPNVSVVNW 248
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+KDY+V+T+RSKDRPKLLFD VCTLTDM+YVVFH ++ EAYQE+YIRH+DG P+
Sbjct: 249 YDKDYSVVTIRSKDRPKLLFDTVCTLTDMEYVVFHANIDAEGPEAYQEYYIRHIDGSPVK 308
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
S+AER RVIQCLEAAIERR SEGL+LELCT DRVGLLSD+TRIFRENSL++ RAE++T
Sbjct: 309 SDAERMRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVTTRD 368
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK +TFYV D +G VD K I+SIR+ IG T L+VK + +E+ T F G F
Sbjct: 369 GKAINTFYVRDASGYLVDGKTIESIRQVIGQTILKVKSNPDELKPVSQESPTRFLFGGLF 428
Query: 360 KARTFQTFKLIRSYS 374
K+R+F F L+RSYS
Sbjct: 429 KSRSFVNFGLVRSYS 443
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 17/168 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K+ TVI + S ++ +L ++V LTD+ ++ +++ F +R
Sbjct: 21 PRVVIDNESCKNATVIRVDSANKHGILLEVVQVLTDLNLIITKAYISSDGGWFMDVFNVR 80
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGL------------ELELCTEDRVGLLSDI 279
DG I+ EA + + + L E R + + +EL DR GLLS++
Sbjct: 81 DQDGNKITDEAILDYIRKSL--GPESRFTSSMRSVGVIPSMDHTSIELTGSDRPGLLSEL 138
Query: 280 TRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNP-VDPKIIDSIR 325
+ + ++ AE+ T + VTD TG+ +DP+ + I+
Sbjct: 139 SAVLTHLKCNVVSAEVWTHNMRAAAVMQVTDEETGSAIIDPERLSRIK 186
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L ++ ++ + +L I +A IS+ GG D F V D GN + D I+D IR+ +G
Sbjct: 45 GILLEVVQVLTDLNLIITKAYISSDGGWFMDVFNVRDQDGNKITDEAILDYIRKSLG 101
>gi|312281803|dbj|BAJ33767.1| unnamed protein product [Thellungiella halophila]
Length = 451
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 225/380 (59%), Positives = 287/380 (75%), Gaps = 8/380 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+R+ VGV+P+ + T IE TG DRP
Sbjct: 74 MDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSSSMRT-VGVIPSTDSTVIELTGCDRP 132
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG AI DP+RLS IK LL NV
Sbjct: 133 GLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRIKNLLRNV 192
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLN 179
L+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE RV ++D+ RP V V N
Sbjct: 193 LKGSNTPREAKTVVSQ-GEVHTDRRLHQMMFEDRDYEHRVVDDDSSIQDERQRPDVCVDN 251
Query: 180 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEAYQE+Y+RH+DG P+
Sbjct: 252 WLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTDGTEAYQEYYVRHIDGSPV 311
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++ RAE+ T
Sbjct: 312 KSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTK 371
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRS----TILAPKPPKETTTGFF 354
GGK +TFYV+D +G +D K +DSIR+ IG T L+VK + P +E+ T F
Sbjct: 372 GGKALNTFYVSDASGYSIDAKTLDSIRQTIGQTILKVKNNPEEQQQRQKSPSQESPTRFL 431
Query: 355 LGNFFKARTFQTFKLIRSYS 374
G FK+++F F L+RSYS
Sbjct: 432 FGGLFKSKSFVNFGLVRSYS 451
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L ++ +I + +L+I +A IS+ GG D F VTD GN V D ++D I++ +G
Sbjct: 45 GILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLG 101
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 21/192 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K+ TVI + S + +L ++V LTD+ + +++ F +
Sbjct: 21 PRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVT 80
Query: 232 HVDGLPISSEAERERVIQCL--EAAIERR--------ASEGLELELCTEDRVGLLSDITR 281
DG ++ E + + + L EA +++ +EL DR GLLS++T
Sbjct: 81 DQDGNKVTDEVVLDYIQKSLGPEACFSSSMRTVGVIPSTDSTVIELTGCDRPGLLSELTA 140
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQIGHTKLQVKRST 339
+ S+ AE+ T + VT D TG + DP+ + I+ + R+
Sbjct: 141 VLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRIKNLL--------RNV 192
Query: 340 ILAPKPPKETTT 351
+ P+E T
Sbjct: 193 LKGSNTPREAKT 204
>gi|224119390|ref|XP_002318060.1| predicted protein [Populus trichocarpa]
gi|222858733|gb|EEE96280.1| predicted protein [Populus trichocarpa]
Length = 441
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 223/375 (59%), Positives = 281/375 (74%), Gaps = 8/375 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
M+VF+V D DG KIRD+ +++ I++ LETDA S+ ++ ++EHT IE TGTDRP
Sbjct: 74 MNVFHVTDDDGNKIRDEGILNCIKKALETDAYMVKSMGK---MLLSKEHTLIELTGTDRP 130
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVL DL CNVVNAE+W HN RAAAV+H+TD STG AI+DP++LS IKELL+NV
Sbjct: 131 GLLSEVCAVLTDLSCNVVNAEVWAHNARAAAVIHITDQSTGTAIEDPRQLSLIKELLYNV 190
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G D+R S+S PG ++ RRLHQ+MF RD+ER V+D RP VTV +
Sbjct: 191 LKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPVS----VDDIRVRPYVTVSDC 246
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+++YTV+T RS DRPKLLFD VCTLTDMQY+VFHG V T EAYQE+YIRH DGLP+S
Sbjct: 247 PDRNYTVVTARSVDRPKLLFDTVCTLTDMQYLVFHGTVITDSDEAYQEYYIRHADGLPMS 306
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RV++C++AAIERR SEGL+LEL T+D GLLSDITRI REN L KRA+IST
Sbjct: 307 SEAERQRVMECIQAAIERRVSEGLQLELFTDDHFGLLSDITRILRENGLCPKRAKISTKN 366
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK + F VTDV+GNPV+PK I IR+Q+G T +QVK + ++PK P+ET F G+FF
Sbjct: 367 GKARHNFIVTDVSGNPVEPKTIYLIRQQMGQTVIQVKGNLSMSPKFPQETPRSFLFGSFF 426
Query: 360 KARTFQTFKLIRSYS 374
K +FQ +LI+S S
Sbjct: 427 KCPSFQNSRLIKSLS 441
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 162 AVGRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
A ++ + + P+V + N ++ TVI + + R L ++V LTD+ V+ +++
Sbjct: 10 AYAKLVRRMNSPRVVIENDACEHATVIQLDTVYRQGTLLEVVQVLTDLNLVITKAYMSSD 69
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA------------SEGLELELC 268
F++ DG I E ++ C++ A+E A E +EL
Sbjct: 70 GGWFMNVFHVTDDDGNKIRDEG----ILNCIKKALETDAYMVKSMGKMLLSKEHTLIELT 125
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRR 326
DR GLLS++ + + S ++ AE+ + ++TD TG + DP+ + I+
Sbjct: 126 GTDRPGLLSEVCAVLTDLSCNVVNAEVWAHNARAAAVIHITDQSTGTAIEDPRQLSLIKE 185
Query: 327 QIGHT--KLQVKRSTILAPKPPKETTTGFFLGN-FFKARTFQ 365
+ + L R+ ++ P E G L F AR F+
Sbjct: 186 LLYNVLKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFE 227
>gi|297838675|ref|XP_002887219.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
gi|297333060|gb|EFH63478.1| hypothetical protein ARALYDRAFT_476032 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 225/380 (59%), Positives = 286/380 (75%), Gaps = 8/380 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE TG DRP
Sbjct: 78 MDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIELTGCDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG I DP+RLS IK LL NV
Sbjct: 137 GLLSELSAVLTHLKCSVLNAEVWTHNTRAAAVMQVTDDSTGCGISDPERLSRIKNLLRNV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLN 179
L+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ RP V V N
Sbjct: 197 LKGSNTPREAKTVVSH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDN 255
Query: 180 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEAYQE+Y+RH+DG P+
Sbjct: 256 WLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVRHIDGSPV 315
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++ RAE+ T
Sbjct: 316 KSEAEKQRVIQCLEAAIKRRVSEGLKLELCTSDRVGLLSNVTRIFRENSLTVTRAEVKTK 375
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK----PPKETTTGFF 354
GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + + P E+ T F
Sbjct: 376 GGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPTRFL 435
Query: 355 LGNFFKARTFQTFKLIRSYS 374
G FK+++F F L+RSYS
Sbjct: 436 FGGLFKSKSFVNFGLVRSYS 455
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L ++ +I + +L+I +A IS+ GG D F VTD GN V D ++D I++ +G
Sbjct: 49 GILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLG 105
>gi|147858719|emb|CAN83103.1| hypothetical protein VITISV_015490 [Vitis vinifera]
Length = 416
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/363 (61%), Positives = 271/363 (74%), Gaps = 15/363 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG KI D+E++DYIQ+ L +DA F S+R SVGV+P+ +HTSIE TG+DRP
Sbjct: 68 MDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELTGSDRP 127
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL L C+VVNAE+WTHN RAAAV+HVTD TG AI DP+RLS +K+LL N
Sbjct: 128 GLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQLLCN- 186
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
LR + S G+ + ERRLHQ+MF DRDYER+ D++ RP V V+N
Sbjct: 187 LRLW----------SLHGVTHTERRLHQMMFADRDYERI---YNDGSDEAQRPNVNVVNW 233
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+KDY+V+T+RSKDRPKLLFD VCTLTDMQYVVFH V+ EAYQE+YIRH+DG P+
Sbjct: 234 YDKDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVK 293
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
S+AER+RVIQCLEAAIERR SEGL+LELCT DRVGLLSD+TRIFRENSLS+ RAE++T
Sbjct: 294 SDAERQRVIQCLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTRAEVTTRA 353
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK +TF+V D +G PVD K IDSIR IG T LQVK S + P+E+ T F L F
Sbjct: 354 GKAVNTFHVRDASGYPVDAKTIDSIREAIGQTILQVKGSPEEIKQIPQESPTRFLLVGLF 413
Query: 360 KAR 362
++R
Sbjct: 414 RSR 416
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L ++ ++ + +L I +A IS+ GG D F VTD GN + D +I+D I++ +G
Sbjct: 39 GILLEVVQVLIDLNLIITKAYISSDGGWFMDVFNVTDQDGNKITDEEILDYIQKSLG 95
>gi|26452308|dbj|BAC43240.1| unknown protein [Arabidopsis thaliana]
Length = 425
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/380 (58%), Positives = 285/380 (75%), Gaps = 8/380 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE TG DRP
Sbjct: 48 MDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIELTGCDRP 106
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS IK LL NV
Sbjct: 107 GLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNV 166
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLN 179
L+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ RP V V N
Sbjct: 167 LKGSNTPREAKTVVSH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDN 225
Query: 180 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+RH+DG P+
Sbjct: 226 WLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPV 285
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++ RAE+ T
Sbjct: 286 KSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTK 345
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK----PPKETTTGFF 354
GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + + P E+ T F
Sbjct: 346 GGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPTRFL 405
Query: 355 LGNFFKARTFQTFKLIRSYS 374
G FK+++F F L+RSYS
Sbjct: 406 FGGLFKSKSFVNFGLVRSYS 425
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L ++ +I + +L+I +A IS+ GG D F VTD GN V D ++D I++ +G
Sbjct: 19 GILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLG 75
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 20/186 (10%)
Query: 178 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 237
+N K TVI + S + +L ++V LTD+ + +++ F + DG
Sbjct: 1 MNSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNK 60
Query: 238 ISSEAERERVIQCL--EAAIERR--------ASEGLELELCTEDRVGLLSDITRIFRENS 287
++ E + + + L EA +++ +EL DR GLLS+++ +
Sbjct: 61 VTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTGCDRPGLLSELSAVLTHLK 120
Query: 288 LSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQIGHTKLQVKRSTILAPKP 345
S+ AEI T + VT D+TG + DP+ + I+ + R+ +
Sbjct: 121 CSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLL--------RNVLKGSNT 172
Query: 346 PKETTT 351
P+E T
Sbjct: 173 PREAKT 178
>gi|15221589|ref|NP_177067.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|22138098|gb|AAM93429.1| ACR4 [Arabidopsis thaliana]
gi|115646770|gb|ABJ17112.1| At1g69040 [Arabidopsis thaliana]
gi|332196757|gb|AEE34878.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 451
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/380 (58%), Positives = 285/380 (75%), Gaps = 8/380 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE TG DRP
Sbjct: 74 MDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIELTGCDRP 132
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS IK LL NV
Sbjct: 133 GLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNV 192
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLN 179
L+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ RP V V N
Sbjct: 193 LKGSNTPREAKTVVSH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDN 251
Query: 180 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+RH+DG P+
Sbjct: 252 WLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPV 311
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++ RAE+ T
Sbjct: 312 KSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTK 371
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK----PPKETTTGFF 354
GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + + P E+ T F
Sbjct: 372 GGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPTRFL 431
Query: 355 LGNFFKARTFQTFKLIRSYS 374
G FK+++F F L+RSYS
Sbjct: 432 FGGLFKSKSFVNFGLVRSYS 451
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L ++ +I + +L+I +A IS+ GG D F VTD GN V D ++D I++ +G
Sbjct: 45 GILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLG 101
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 21/192 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K TVI + S + +L ++V LTD+ + +++ F +
Sbjct: 21 PRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVT 80
Query: 232 HVDGLPISSEAERERVIQCL--EAAIERR--------ASEGLELELCTEDRVGLLSDITR 281
DG ++ E + + + L EA +++ +EL DR GLLS+++
Sbjct: 81 DQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTGCDRPGLLSELSA 140
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQIGHTKLQVKRST 339
+ S+ AEI T + VT D+TG + DP+ + I+ + R+
Sbjct: 141 VLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLL--------RNV 192
Query: 340 ILAPKPPKETTT 351
+ P+E T
Sbjct: 193 LKGSNTPREAKT 204
>gi|42572033|ref|NP_974107.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332196758|gb|AEE34879.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 455
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/380 (58%), Positives = 285/380 (75%), Gaps = 8/380 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE TG DRP
Sbjct: 78 MDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIELTGCDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS IK LL NV
Sbjct: 137 GLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLN 179
L+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ RP V V N
Sbjct: 197 LKGSNTPREAKTVVSH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDN 255
Query: 180 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+RH+DG P+
Sbjct: 256 WLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPV 315
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++ RAE+ T
Sbjct: 316 KSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTK 375
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK----PPKETTTGFF 354
GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + + P E+ T F
Sbjct: 376 GGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPTRFL 435
Query: 355 LGNFFKARTFQTFKLIRSYS 374
G FK+++F F L+RSYS
Sbjct: 436 FGGLFKSKSFVNFGLVRSYS 455
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L ++ +I + +L+I +A IS+ GG D F VTD GN V D ++D I++ +G
Sbjct: 49 GILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLG 105
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 21/192 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K TVI + S + +L ++V LTD+ + +++ F +
Sbjct: 25 PRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVT 84
Query: 232 HVDGLPISSEAERERVIQCL--EAAIERR--------ASEGLELELCTEDRVGLLSDITR 281
DG ++ E + + + L EA +++ +EL DR GLLS+++
Sbjct: 85 DQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTGCDRPGLLSELSA 144
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQIGHTKLQVKRST 339
+ S+ AEI T + VT D+TG + DP+ + I+ + R+
Sbjct: 145 VLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLL--------RNV 196
Query: 340 ILAPKPPKETTT 351
+ P+E T
Sbjct: 197 LKGSNTPREAKT 208
>gi|195970393|gb|ACG60681.1| unknown protein [Brassica oleracea var. alboglabra]
Length = 446
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 226/383 (59%), Positives = 287/383 (74%), Gaps = 13/383 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ V+DYIQ+ L +A F+ +R+ +GV P+ + T IE TG DRP
Sbjct: 68 MDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTPMRT-IGVTPSTDSTVIELTGCDRP 126
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD STG AI DP+RLS IK LL NV
Sbjct: 127 GLLSELTAVLTHLRCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRIKNLLRNV 186
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV----GRVEDKSSRPQVT 176
L+G + R+AKT LS G ++ +RRLHQ+MF+DRDYE +AV ++D+ RP V
Sbjct: 187 LKGSNTPREAKTVLSH-GEVHTDRRLHQMMFEDRDYE--HRAVVDDDSSIQDERQRPDVC 243
Query: 177 VLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
V N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEAYQE+Y+RH+DG
Sbjct: 244 VDNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAYQEYYVRHIDG 303
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
P+ SEAE++RVIQCLEAAI RR SEGL+LELCT DRVGLLS++TRIFRENSL++ RAE+
Sbjct: 304 SPVKSEAEKQRVIQCLEAAINRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEV 363
Query: 296 STIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRS---TILAPKPP-KETTT 351
T GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + KPP +++ T
Sbjct: 364 KTKGGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPEEQQQRQKPPSQDSPT 423
Query: 352 GFFLGNFFKARTFQTFKLIRSYS 374
F G FK+++F F L+RSYS
Sbjct: 424 RFLFGGLFKSKSFVNFGLVRSYS 446
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L ++ +I + +L+I +A IS+ GG D F VTD GN V D ++D I++ +G
Sbjct: 39 GILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLG 95
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 84/203 (41%), Gaps = 21/203 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K+ TVI + S + +L ++V LTD+ + +++ F +
Sbjct: 15 PRVVIDNDSCKNATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVT 74
Query: 232 HVDGLPISSEAERERVIQCL--EAAIE--------RRASEGLELELCTEDRVGLLSDITR 281
DG ++ E + + + L EA +++ +EL DR GLLS++T
Sbjct: 75 DQDGNKVTDEVVLDYIQKSLGPEACFSTPMRTIGVTPSTDSTVIELTGCDRPGLLSELTA 134
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQIGHTKLQVKRST 339
+ S+ AE+ T + VT D TG + DP+ + I+ + R+
Sbjct: 135 VLTHLRCSVLNAEVWTHNTRAAAVMQVTDDSTGCAISDPERLSRIKNLL--------RNV 186
Query: 340 ILAPKPPKETTTGFFLGNFFKAR 362
+ P+E T G R
Sbjct: 187 LKGSNTPREAKTVLSHGEVHTDR 209
>gi|6730631|gb|AAF27052.1|AC008262_1 F4N2.2 [Arabidopsis thaliana]
Length = 445
Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust.
Identities = 224/380 (58%), Positives = 285/380 (75%), Gaps = 8/380 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ V+DYIQ+ L +A F+ S+RS VGV+P+ + T IE TG DRP
Sbjct: 68 MDVFNVTDQDGNKVTDEVVLDYIQKSLGPEACFSTSMRS-VGVIPSTDSTVIELTGCDRP 126
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL L C+V+NAEIWTHN RAAAV+ VTD TG I DP+RLS IK LL NV
Sbjct: 127 GLLSELSAVLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLLRNV 186
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLN 179
L+G + R+AKT +S G ++ +RRLHQ+MF+DRDYE R+ ++D+ RP V V N
Sbjct: 187 LKGSNTPREAKTVVSH-GEVHTDRRLHQMMFEDRDYEHRLVDDDSSIQDERQRPDVCVDN 245
Query: 180 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+Y+RH+DG P+
Sbjct: 246 WLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEYYVRHIDGSPV 305
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SEAE++RVIQCLEAAI+RR SEGL+LELCT DRVGLLS++TRIFRENSL++ RAE+ T
Sbjct: 306 KSEAEKQRVIQCLEAAIKRRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVKTK 365
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPK----PPKETTTGFF 354
GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + + P E+ T F
Sbjct: 366 GGKALNTFYVSDASGYSIDAKTIDSIRQTIGQTILKVKNNPQEQQQRQKSPSHESPTRFL 425
Query: 355 LGNFFKARTFQTFKLIRSYS 374
G FK+++F F L+RSYS
Sbjct: 426 FGGLFKSKSFVNFGLVRSYS 445
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L ++ +I + +L+I +A IS+ GG D F VTD GN V D ++D I++ +G
Sbjct: 39 GILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVTDQDGNKVTDEVVLDYIQKSLG 95
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 21/192 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K TVI + S + +L ++V LTD+ + +++ F +
Sbjct: 15 PRVVIDNDSCKKATVIRVDSANEYGILLEVVQILTDLNLTITKAYISSDGGWFMDVFNVT 74
Query: 232 HVDGLPISSEAERERVIQCL--EAAIERR--------ASEGLELELCTEDRVGLLSDITR 281
DG ++ E + + + L EA +++ +EL DR GLLS+++
Sbjct: 75 DQDGNKVTDEVVLDYIQKSLGPEACFSTSMRSVGVIPSTDSTVIELTGCDRPGLLSELSA 134
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQIGHTKLQVKRST 339
+ S+ AEI T + VT D+TG + DP+ + I+ + R+
Sbjct: 135 VLTHLKCSVLNAEIWTHNTRAAAVMQVTDDLTGCGISDPERLSRIKNLL--------RNV 186
Query: 340 ILAPKPPKETTT 351
+ P+E T
Sbjct: 187 LKGSNTPREAKT 198
>gi|449452827|ref|XP_004144160.1| PREDICTED: uncharacterized protein LOC101218703 [Cucumis sativus]
gi|449524655|ref|XP_004169337.1| PREDICTED: uncharacterized protein LOC101228960 [Cucumis sativus]
Length = 444
Score = 432 bits (1110), Expect = e-118, Method: Compositional matrix adjust.
Identities = 225/377 (59%), Positives = 278/377 (73%), Gaps = 11/377 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ V+DYI++ LE+D+ FA S+RS VGV P+ ++T IE G DR
Sbjct: 74 MDVFNVTDQDGNKVTDEGVLDYIKRSLESDSCFASSMRS-VGVKPSVDYTVIELIGNDRQ 132
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL L CNVV+AE+WTHN RAAAV+HVTD TG AI D +RLS IK LL NV
Sbjct: 133 GLLSEVSAVLTHLKCNVVHAEVWTHNTRAAAVMHVTDDETGSAITDLERLSRIKGLLSNV 192
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
LRG + K ++ G+ + ERRLHQ+MF DRDYE +++ V +ED+ +P V V+N
Sbjct: 193 LRGSNSRSKGAKTVVSHGVTHIERRLHQMMFADRDYELLDEDV--MEDQQ-KPNVKVVNW 249
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+ DY+V+T+RSKDRPKLLFD VCTLTDMQYVVFH V TEAYQE+YIRH+DG P+
Sbjct: 250 CDIDYSVVTIRSKDRPKLLFDTVCTLTDMQYVVFHANVVAEGTEAYQEYYIRHIDGSPVK 309
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
S+AER+RVI CLEAAI RR SEGL+LELCT DRVGLLSD+TRIFRENSL++ RAE++T
Sbjct: 310 SDAERQRVIHCLEAAIRRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVTTKA 369
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETT----TGFFL 355
GK +TFYV D +G PVD K IDSIR IG T L+VK S+ +PK K+ + T F
Sbjct: 370 GKAINTFYVRDPSGYPVDSKTIDSIRELIGQTILKVKGSS--SPKEQKQASQDSPTRFLF 427
Query: 356 GNFFKARTFQTFKLIRS 372
G F++R+F F LIRS
Sbjct: 428 GGLFRSRSFVNFGLIRS 444
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 70/150 (46%), Gaps = 13/150 (8%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N KD TVI + S ++ +L ++V LTD+ +V ++ F +
Sbjct: 21 PRVVIDNDACKDATVIRVDSANKHGILLEVVQVLTDLNLIVTKAYISCDGCWFMDVFNVT 80
Query: 232 HVDGLPISSEAERERVIQCLEA----AIERRASEGLE-------LELCTEDRVGLLSDIT 280
DG ++ E + + + LE+ A R S G++ +EL DR GLLS+++
Sbjct: 81 DQDGNKVTDEGVLDYIKRSLESDSCFASSMR-SVGVKPSVDYTVIELIGNDRQGLLSEVS 139
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
+ ++ AE+ T + +VTD
Sbjct: 140 AVLTHLKCNVVHAEVWTHNTRAAAVMHVTD 169
>gi|356499934|ref|XP_003518790.1| PREDICTED: uncharacterized protein LOC100813551 isoform 1 [Glycine
max]
Length = 449
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 217/375 (57%), Positives = 273/375 (72%), Gaps = 5/375 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV DG K+ D+ ++DYI++ L ++ +RS VGV T +HT+IE GTDRP
Sbjct: 79 MDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRS-VGVKQTMDHTAIELMGTDRP 137
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL +L CN++NAE+WTHN RAAAV+HVTD TG AI DP+RLS IKELL NV
Sbjct: 138 GLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSIIKELLCNV 197
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L G + R AKT ++ + ERRLHQ+MF DRDYERV E + RP V V+N
Sbjct: 198 LGGGNKKRGAKTVVTDEAT-HTERRLHQMMFADRDYERVNDDDDFAEKQ--RPNVNVVNW 254
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+KDY+V+T++ KDRPKLLFD VCTLTDMQYVVFH ++ EAYQE+YI+H+DG P+
Sbjct: 255 SDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKHIDGSPVK 314
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
S+AER+RVIQCL AAIERR SEGL+LELCT DRVGLLSD+TRIFRENSL++ RAE++T G
Sbjct: 315 SDAERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVATKG 374
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK +TFYV +G PVD K I+SIR+ IG+T L+VK S P+++ T F
Sbjct: 375 GKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPTRSLFSGLF 434
Query: 360 KARTFQTFKLIRSYS 374
K+R+F F L++SYS
Sbjct: 435 KSRSFVNFGLVKSYS 449
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 13/166 (7%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K+ TVI + S ++ +L ++V LTD+ ++ +++ F +
Sbjct: 26 PRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVT 85
Query: 232 HVDGLPISSEAERERVIQCL--EAAIE--------RRASEGLELELCTEDRVGLLSDITR 281
DG ++ EA + + + L E+ + ++ + +EL DR GLLS+++
Sbjct: 86 GQDGNKVTDEAILDYIRKSLGPESCVTSPMRSVGVKQTMDHTAIELMGTDRPGLLSEVSA 145
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIR 325
+ +I AE+ T + +VTD TG+ + DP+ + I+
Sbjct: 146 VLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSIIK 191
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ +I + +L I +A IS+ GG D F VT GN V D I+D IR+
Sbjct: 45 SANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKS 104
Query: 328 IG 329
+G
Sbjct: 105 LG 106
>gi|294464028|gb|ADE77534.1| unknown [Picea sitchensis]
Length = 439
Score = 429 bits (1102), Expect = e-117, Method: Compositional matrix adjust.
Identities = 211/384 (54%), Positives = 281/384 (73%), Gaps = 11/384 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-MPTEEHTSIEFTGTDR 59
MDVF V D +GKK+ D+ VI YI++ LET+ PS SVGV + ++HT+IE TGTDR
Sbjct: 57 MDVFYVTDENGKKLTDEGVIGYIEKTLETNPCILPSFGKSVGVEVAADQHTAIELTGTDR 116
Query: 60 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119
PGL SE+ AVL+DL CNVV AE+WTHN R A +V+VTD TG I D +++ I+ELL N
Sbjct: 117 PGLLSEIFAVLSDLKCNVVEAEVWTHNRRVACLVYVTDEETGAPIDDGQKICKIEELLRN 176
Query: 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV-----EDKSSRPQ 174
V+RG + R AKT ++ G+ + ERRLHQ+MF DRDYE+++ VGR ++ +++P
Sbjct: 177 VMRGNSNIRGAKT-VASMGLTHTERRLHQLMFADRDYEKLDGTVGRAPPPLNDNDNAKPH 235
Query: 175 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
VTV N +E+ Y+V+ ++ KDRPKLLFD+VCTLTDM+YVVFH +++ + +QE+YIRH
Sbjct: 236 VTVENCLERGYSVVNVQCKDRPKLLFDVVCTLTDMEYVVFHATIDSQGPQTHQEYYIRHT 295
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG P++SEAER+RVIQCLEAAI RRASEG+ LELCT DRVGLLSD+TRIFREN +S+ RA
Sbjct: 296 DGCPVNSEAERQRVIQCLEAAIRRRASEGVRLELCTNDRVGLLSDVTRIFRENGMSVTRA 355
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGF 353
E+ST G K + FYVTD GNPVDPK ++++RR+IG T LQVK + + P +E F
Sbjct: 356 EVSTRGDKAVNVFYVTDAAGNPVDPKTVEAVRREIGLTILQVKDNCMDTKSPRREPAIPF 415
Query: 354 FLGNFFKART---FQTFKLIRSYS 374
GN FK+++ + LI+SYS
Sbjct: 416 SFGNLFKSKSERFLYSLGLIKSYS 439
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 14/159 (8%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + + T++ + S ++ +L + V LTD++ + V++ FY+
Sbjct: 4 PRVVIDNAVCGNATLVKVDSANKHGILLEAVQVLTDLKLNINKANVSSDGRWFMDVFYVT 63
Query: 232 HVDGLPISSEAERERVIQCLE------------AAIERRASEGLELELCTEDRVGLLSDI 279
+G ++ E + + LE +E A + +EL DR GLLS+I
Sbjct: 64 DENGKKLTDEGVIGYIEKTLETNPCILPSFGKSVGVEVAADQHTAIELTGTDRPGLLSEI 123
Query: 280 TRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPVD 317
+ + ++ AE+ T +V YVTD TG P+D
Sbjct: 124 FAVLSDLKCNVVEAEVWTHNRRVACLVYVTDEETGAPID 162
>gi|356495189|ref|XP_003516462.1| PREDICTED: uncharacterized protein LOC100787134 [Glycine max]
Length = 449
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 215/375 (57%), Positives = 272/375 (72%), Gaps = 5/375 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV DG K+ D+ ++DYI++ L ++ +RS VGV T +H +IE GTDRP
Sbjct: 79 MDVFNVTGQDGNKVTDEAILDYIRKSLGPESCVTSPMRS-VGVKQTTDHIAIELMGTDRP 137
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD +G AI DP+RLS IKELL NV
Sbjct: 138 GLLSEVSAVLTNLKCNIVNAEVWTHNTRAAAVMHVTDEESGSAITDPQRLSIIKELLCNV 197
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L G + R AKT ++ + ERRLHQ+MF DRDYERV D+ RP V V+N
Sbjct: 198 LGGGNKKRGAKTVVTDEA-THTERRLHQMMFADRDYERVNDDDDF--DEKQRPNVNVVNW 254
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+KDY+V+T++ KDRPKLLFD VCTLTDMQYVVFH ++ EAYQE+YI+H+DG P+
Sbjct: 255 SDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKHIDGSPVK 314
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
S+AER+RVIQCL AAI+RR SEGL+LELCT DRVGLLSD+TRIFRENSL++ RAE++T G
Sbjct: 315 SDAERQRVIQCLAAAIQRRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVATKG 374
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK +TFYV +G PVD K I+SIR+ IG+T L+VK S P+++ T F
Sbjct: 375 GKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPTRSLFSGLF 434
Query: 360 KARTFQTFKLIRSYS 374
K+R+F F L++SYS
Sbjct: 435 KSRSFVNFGLVKSYS 449
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 11/149 (7%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K+ TVI + S ++ +L ++V LTD+ ++ +++ F +
Sbjct: 26 PRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVT 85
Query: 232 HVDGLPISSEAERERVIQCL--EAAIE--------RRASEGLELELCTEDRVGLLSDITR 281
DG ++ EA + + + L E+ + ++ ++ + +EL DR GLLS+++
Sbjct: 86 GQDGNKVTDEAILDYIRKSLGPESCVTSPMRSVGVKQTTDHIAIELMGTDRPGLLSEVSA 145
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVTD 310
+ +I AE+ T + +VTD
Sbjct: 146 VLTNLKCNIVNAEVWTHNTRAAAVMHVTD 174
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ +I + +L I +A IS+ GG D F VT GN V D I+D IR+
Sbjct: 45 SANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTGQDGNKVTDEAILDYIRKS 104
Query: 328 IG 329
+G
Sbjct: 105 LG 106
>gi|224119726|ref|XP_002318147.1| predicted protein [Populus trichocarpa]
gi|222858820|gb|EEE96367.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 216/368 (58%), Positives = 266/368 (72%), Gaps = 8/368 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
M+VF+V D G KIRD+ +++ I++ LETDA S+ ++ ++EHT +E TGTDRP
Sbjct: 74 MNVFHVTDDGGNKIRDEGILNCIEKALETDAYMVKSMGK---MLLSKEHTLVELTGTDRP 130
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVL DL CNVVNAEIW HN RAAAV+HVTD STG AI+DP++LS IKELL+NV
Sbjct: 131 GLLSEVCAVLTDLSCNVVNAEIWAHNARAAAVIHVTDQSTGTAIEDPRQLSLIKELLYNV 190
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G D+R S+S PG ++ RRLHQ+MF RD+ER +D S RP VTV +
Sbjct: 191 LKGLGDYRTPTVSISSPGEIHIGRRLHQMMFAARDFERPLSE----DDNSVRPSVTVSDC 246
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
++DYTV+T S DRPKLLFD VCTLTDMQY+VFHG VNT EAYQE+YIRHVDGLP+S
Sbjct: 247 PDRDYTVVTATSIDRPKLLFDTVCTLTDMQYLVFHGTVNTSSDEAYQEYYIRHVDGLPVS 306
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RV++C++AAIERRA+EGL LEL T+D GL+SDITRI REN L KRAEIST
Sbjct: 307 SEAERQRVMECIQAAIERRATEGLHLELFTDDHFGLISDITRILRENGLCPKRAEISTKN 366
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK K F VTDV+GNPV+PK I IR+Q+G T +QVK + + T F L F
Sbjct: 367 GKAKHNFIVTDVSGNPVEPKTIYLIRQQMGQTVIQVKGNFKYVSEISPAETKKFPLWELF 426
Query: 360 KARTFQTF 367
+ F F
Sbjct: 427 QMPRFPKF 434
>gi|357487953|ref|XP_003614264.1| ACR4 [Medicago truncatula]
gi|355515599|gb|AES97222.1| ACR4 [Medicago truncatula]
Length = 451
Score = 419 bits (1076), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/375 (57%), Positives = 277/375 (73%), Gaps = 8/375 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ ++DYI++ L ++ FA ++RS VGV T +HT+IE G+DRP
Sbjct: 84 MDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRS-VGVKQTPDHTAIELMGSDRP 142
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS IKELL NV
Sbjct: 143 GLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKELLCNV 202
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L G + R AKT ++ + +RRLHQ+MFDDRDYERV+ D+ RP V V+N
Sbjct: 203 LGGGNRKRGAKTVVTDDS-THTDRRLHQMMFDDRDYERVDDDDF---DEKQRPNVDVVNW 258
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+KDY+V+T+ +DRPKL+FD VCTLTDMQYVVFH ++ +AYQE+YI+H+DG P+
Sbjct: 259 SDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDGSPVK 318
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
S+AER+RVI CLEAAIERR SEGL+LELCT DRVGLLS++TRIFRENSL++ RAE++T G
Sbjct: 319 SDAERQRVIHCLEAAIERRVSEGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKG 378
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
GK +TFYV +G VD K I+SIR+ IG+T L+VK S P+ T + F G F
Sbjct: 379 GKAVNTFYVRGASGCIVDSKTIESIRQTIGNTILKVKGSPESLPQDSP-TRSSIFSG-LF 436
Query: 360 KARTFQTFKLIRSYS 374
K+R+F F L++SYS
Sbjct: 437 KSRSFVNFGLVKSYS 451
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ +I + +L I +A IS+ GG D F VTD GN V D I+D IR+
Sbjct: 50 SANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKS 109
Query: 328 IG 329
+G
Sbjct: 110 LG 111
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N ++ TVI + S ++ +L ++V LTD+ ++ +++ F +
Sbjct: 31 PRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVT 90
Query: 232 HVDGLPISSEAERERVIQ------CLEAAIE----RRASEGLELELCTEDRVGLLSDITR 281
DG ++ E + + + C + ++ + +EL DR GLLS+++
Sbjct: 91 DQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMGSDRPGLLSEVSA 150
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVTD 310
+ +I AE+ T + +VTD
Sbjct: 151 VLTNLKCNIVNAEVWTHNMRAAAVMHVTD 179
>gi|125544303|gb|EAY90442.1| hypothetical protein OsI_12028 [Oryza sativa Indica Group]
Length = 455
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/378 (57%), Positives = 274/378 (72%), Gaps = 10/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T IE TG
Sbjct: 82 MDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTG 141
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL+ IKE
Sbjct: 142 TDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRETGLAISDTQRLARIKER 201
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 176
L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V + P V+
Sbjct: 202 LSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---NPTPVVS 257
Query: 177 VLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+YIRH+DG
Sbjct: 258 VVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDG 317
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
P++SEAER+RVIQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RAE+
Sbjct: 318 SPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEV 377
Query: 296 STIGGKVKDTFYVTDVTG-NPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 354
ST G K +TFYV D G + VD K +++IR++IG T LQVK PP+E+ + F
Sbjct: 378 STRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPSRFL 437
Query: 355 LGNFFKARTFQTFKLIRS 372
+ F+ R+ + LIRS
Sbjct: 438 FSSLFRPRSLYSLGLIRS 455
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 169 KSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
K + P+V + N K+ TV+ + S ++ +L ++V LT++Q +V +++
Sbjct: 25 KMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYISSDGGWFMDV 84
Query: 228 FYIRHVDGLPISSEAERERVI----QCLEA----AIERRASEGLE-------LELCTEDR 272
F + +G I E+ + ++ +CL A RR S G+E +EL DR
Sbjct: 85 FNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTGTDR 144
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
GLLS+++ + ++ AE+ T + V D
Sbjct: 145 PGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMD 182
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ ++ E L +K+A IS+ GG D F VTD G + D ++D I +
Sbjct: 48 SANKYGILLEVVQVLTELQLIVKKAYISSDGGWFMDVFNVTDQNGQKIMDESVLDEIVKY 107
Query: 328 I 328
I
Sbjct: 108 I 108
>gi|125586650|gb|EAZ27314.1| hypothetical protein OsJ_11253 [Oryza sativa Japonica Group]
Length = 455
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/378 (57%), Positives = 274/378 (72%), Gaps = 10/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T IE TG
Sbjct: 82 MDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTG 141
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL+ IKE
Sbjct: 142 TDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARIKER 201
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 176
L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V + P V+
Sbjct: 202 LSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---NPTPVVS 257
Query: 177 VLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+YIRH+DG
Sbjct: 258 VVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDG 317
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
P++SEAER+RVIQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RAE+
Sbjct: 318 SPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEV 377
Query: 296 STIGGKVKDTFYVTDVTG-NPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 354
ST G K +TFYV D G + VD K +++IR++IG T LQVK PP+E+ + F
Sbjct: 378 STRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPSRFL 437
Query: 355 LGNFFKARTFQTFKLIRS 372
+ F+ R+ + LIRS
Sbjct: 438 FSSLFRPRSLYSLGLIRS 455
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 169 KSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
K + P+V + N K+ TV+ + S ++ +L ++V LT++Q +V +++
Sbjct: 25 KMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYISSDGGWFMDV 84
Query: 228 FYIRHVDGLPISSEAERERVI----QCLEA----AIERRASEGLE-------LELCTEDR 272
F + +G I E+ + ++ +CL A RR S G+E +EL DR
Sbjct: 85 FNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTGTDR 144
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
GLLS+++ + ++ AE+ T + V D
Sbjct: 145 PGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMD 182
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ ++ E L +K+A IS+ GG D F VTD G + D ++D I +
Sbjct: 48 SANKYGILLEVVQVLTELQLIVKKAYISSDGGWFMDVFNVTDQNGQKIMDESVLDEIVKY 107
Query: 328 I 328
I
Sbjct: 108 I 108
>gi|115453517|ref|NP_001050359.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|41469089|gb|AAS07063.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708791|gb|ABF96586.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548830|dbj|BAF12273.1| Os03g0413100 [Oryza sativa Japonica Group]
gi|125860400|dbj|BAF46923.1| ACT-domain repeat protein 7 [Oryza sativa Japonica Group]
gi|215693262|dbj|BAG88644.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 452
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 216/378 (57%), Positives = 274/378 (72%), Gaps = 10/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T IE TG
Sbjct: 79 MDVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTG 138
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL+ IKE
Sbjct: 139 TDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARIKER 198
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 176
L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V + P V+
Sbjct: 199 LSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---NPTPVVS 254
Query: 177 VLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+YIRH+DG
Sbjct: 255 VVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDG 314
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
P++SEAER+RVIQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RAE+
Sbjct: 315 SPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEV 374
Query: 296 STIGGKVKDTFYVTDVTG-NPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 354
ST G K +TFYV D G + VD K +++IR++IG T LQVK PP+E+ + F
Sbjct: 375 STRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPSRFL 434
Query: 355 LGNFFKARTFQTFKLIRS 372
+ F+ R+ + LIRS
Sbjct: 435 FSSLFRPRSLYSLGLIRS 452
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 16/158 (10%)
Query: 169 KSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
K + P+V + N K+ TV+ + S ++ +L ++V LT++Q +V +++
Sbjct: 22 KMNPPRVVIDNTSCKNATVVHVDSANKYGILLEVVQVLTELQLIVKKAYISSDGGWFMDV 81
Query: 228 FYIRHVDGLPISSEAERERVI----QCLEA----AIERRASEGLE-------LELCTEDR 272
F + +G I E+ + ++ +CL A RR S G+E +EL DR
Sbjct: 82 FNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTGTDR 141
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
GLLS+++ + ++ AE+ T + V D
Sbjct: 142 PGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMD 179
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ ++ E L +K+A IS+ GG D F VTD G + D ++D I +
Sbjct: 45 SANKYGILLEVVQVLTELQLIVKKAYISSDGGWFMDVFNVTDQNGQKIMDESVLDEIVKY 104
Query: 328 I 328
I
Sbjct: 105 I 105
>gi|356499936|ref|XP_003518791.1| PREDICTED: uncharacterized protein LOC100813551 isoform 2 [Glycine
max]
Length = 433
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 215/378 (56%), Positives = 268/378 (70%), Gaps = 22/378 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP---TEEHTSIEFTGT 57
MDVFNV DG K+ D+ ++DYI++ VGV P T +HT+IE GT
Sbjct: 74 MDVFNVTGQDGNKVTDEAILDYIRK---------------VGVSPFGQTMDHTAIELMGT 118
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL SEV AVL +L CN++NAE+WTHN RAAAV+HVTD TG AI DP+RLS IKELL
Sbjct: 119 DRPGLLSEVSAVLTNLKCNILNAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSIIKELL 178
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 177
NVL G + R AKT ++ + ERRLHQ+MF DRDYERV E + RP V V
Sbjct: 179 CNVLGGGNKKRGAKTVVTDEA-THTERRLHQMMFADRDYERVNDDDDFAEKQ--RPNVNV 235
Query: 178 LNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
+N +KDY+V+T++ KDRPKLLFD VCTLTDMQYVVFH ++ EAYQE+YI+H+DG
Sbjct: 236 VNWSDKDYSVVTIQCKDRPKLLFDTVCTLTDMQYVVFHANIDAEGPEAYQEYYIKHIDGS 295
Query: 237 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
P+ S+AER+RVIQCL AAIERR SEGL+LELCT DRVGLLSD+TRIFRENSL++ RAE++
Sbjct: 296 PVKSDAERQRVIQCLAAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLTVTRAEVA 355
Query: 297 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLG 356
T GGK +TFYV +G PVD K I+SIR+ IG+T L+VK S P+++ T
Sbjct: 356 TKGGKAVNTFYVRGASGFPVDSKTIESIRQTIGNTILKVKGSPEEMKSVPQDSPTRSLFS 415
Query: 357 NFFKARTFQTFKLIRSYS 374
FK+R+F F L++SYS
Sbjct: 416 GLFKSRSFVNFGLVKSYS 433
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 77/156 (49%), Gaps = 4/156 (2%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K+ TVI + S ++ +L ++V LTD+ ++ +++ F +
Sbjct: 21 PRVVIDNEACKNATVIRVDSANKHGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVT 80
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
DG ++ EA + I+ + + + + +EL DR GLLS+++ + +I
Sbjct: 81 GQDGNKVTDEAILD-YIRKVGVSPFGQTMDHTAIELMGTDRPGLLSEVSAVLTNLKCNIL 139
Query: 292 RAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIR 325
AE+ T + +VTD TG+ + DP+ + I+
Sbjct: 140 NAEVWTHNTRAAAVMHVTDEETGSAISDPQRLSIIK 175
>gi|41469088|gb|AAS07062.1| putative ACT domain containing protein, ACR4, with alternative
splicing forms [Oryza sativa Japonica Group]
gi|108708792|gb|ABF96587.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
Length = 374
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 215/378 (56%), Positives = 273/378 (72%), Gaps = 10/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVID----YIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
M VFNV D +G+KI D+ V+D YI + L D+ F PS R SVGV P+ ++T IE TG
Sbjct: 1 MSVFNVTDQNGQKIMDESVLDEIVKYIHKCLGADSCFLPSRRRSVGVEPSSDYTLIELTG 60
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL +L CNVVNAE+WTHN RAAAV+ V D TG AI D +RL+ IKE
Sbjct: 61 TDRPGLLSEVSAVLTNLECNVVNAEVWTHNKRAAAVMQVMDRKTGLAISDTQRLARIKER 120
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 176
L V +G + + KT+++ GI + ERRLHQ+M +DRDYER +K V + P V+
Sbjct: 121 LSYVFKGSNRSQDTKTTVTM-GITHTERRLHQLMLEDRDYERYDKDRTNV---NPTPVVS 176
Query: 177 VLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
V+N ++KDY+V+ +R KDRPKLLFD VCTLTDMQYVVFHG V++ EAYQE+YIRH+DG
Sbjct: 177 VVNWLDKDYSVVNIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDSEGPEAYQEYYIRHIDG 236
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
P++SEAER+RVIQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RAE+
Sbjct: 237 SPVNSEAERQRVIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRAEV 296
Query: 296 STIGGKVKDTFYVTDVTG-NPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 354
ST G K +TFYV D G + VD K +++IR++IG T LQVK PP+E+ + F
Sbjct: 297 STRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIGQTVLQVKGHPDHRKSPPQESPSRFL 356
Query: 355 LGNFFKARTFQTFKLIRS 372
+ F+ R+ + LIRS
Sbjct: 357 FSSLFRPRSLYSLGLIRS 374
>gi|224134040|ref|XP_002321721.1| predicted protein [Populus trichocarpa]
gi|222868717|gb|EEF05848.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/337 (62%), Positives = 255/337 (75%), Gaps = 8/337 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
M+VF V D G KIRD+++++ I++ LETDA ++S+ ++P++EHT IE TGTDRP
Sbjct: 68 MNVFYVTDDHGNKIRDEDIVNCIEKALETDACM---VKSTGKMLPSKEHTLIELTGTDRP 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVL DL CNVVNAEIW HN RAAAV+H+ D STG AI+DP++LS IKELL+NV
Sbjct: 125 GLLSEVCAVLTDLRCNVVNAEIWAHNGRAAAVIHIADQSTGTAIEDPRKLSLIKELLYNV 184
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G+ DFR S+S PG ++ RRLHQ+MF RD+ER G D S RP VTV +
Sbjct: 185 LKGHGDFRTPIVSISSPGEIHIGRRLHQMMFAARDFERP----GSENDNSVRPYVTVFDC 240
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
++DYTV+T S DRPKL+FD VCTLTDMQY+VFHG V T +AYQE+YIRHVDG P S
Sbjct: 241 PDRDYTVVTATSIDRPKLVFDTVCTLTDMQYLVFHGTVITDSKKAYQEYYIRHVDGFPTS 300
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVI+C++AAIERRASEGL LEL T+D GLLS ITRI REN L K AEIST
Sbjct: 301 SEAERQRVIECIQAAIERRASEGLPLELFTDDHFGLLSYITRILRENGLWPKSAEISTRN 360
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 336
GK K ++ VTDV+GNPVDPK I I +Q+G T LQVK
Sbjct: 361 GKAKHSYIVTDVSGNPVDPKTILLIHQQMGQTVLQVK 397
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 28/227 (12%)
Query: 160 EKAVGRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
+ A ++ + + P+V V N ++ TVI + + R L ++V LTD+ V+ ++
Sbjct: 2 DDAYAKLLRRVNSPRVVVDNDACEHATVIQVDTVKRQGALLEVVQVLTDLNLVMTKAYMS 61
Query: 219 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS------------EGLELE 266
+ FY+ G I E ++ C+E A+E A E +E
Sbjct: 62 SDGVWFMNVFYVTDDHGNKIRD----EDIVNCIEKALETDACMVKSTGKMLPSKEHTLIE 117
Query: 267 LCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSI 324
L DR GLLS++ + + ++ AEI G+ ++ D TG + DP+ + I
Sbjct: 118 LTGTDRPGLLSEVCAVLTDLRCNVVNAEIWAHNGRAAAVIHIADQSTGTAIEDPRKLSLI 177
Query: 325 RRQI-----GHTKLQVKRSTILAPKPPKETTTGFFLGN-FFKARTFQ 365
+ + GH R+ I++ P E G L F AR F+
Sbjct: 178 KELLYNVLKGHGDF---RTPIVSISSPGEIHIGRRLHQMMFAARDFE 221
>gi|297818020|ref|XP_002876893.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
gi|297322731|gb|EFH53152.1| hypothetical protein ARALYDRAFT_904656 [Arabidopsis lyrata subsp.
lyrata]
Length = 456
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 216/381 (56%), Positives = 270/381 (70%), Gaps = 11/381 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTSIEFTGTD 58
MDVFNV D DG K+ D+ V+DYI++ L D S F+PS+RS++GV + ++T IE TGTD
Sbjct: 78 MDVFNVTDQDGNKVTDEIVLDYIRKSLGPDESTCFSPSMRSTIGVKQSVDYTVIELTGTD 137
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 118
RPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS I++LL
Sbjct: 138 RPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLSKIRKLLG 197
Query: 119 NVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR-- 172
VL G FR+ KT +S + +R+LHQ+MF DRDY+ E V EDK R
Sbjct: 198 YVLTGGSSGRRFREPKTMVSSALDDTHTDRKLHQLMFADRDYDEWENNVDD-EDKCGRVV 256
Query: 173 PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P V V N+ + DY+++ ++ KDRPKLLFD V TLTDM YVV H ++ EAYQE+YIR
Sbjct: 257 PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPEAYQEYYIR 316
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
H DG P+ SEAER+RVI+CL+AAI+RR SEGL+LELCT DRVGLLSD+TRIFRENSL++
Sbjct: 317 HTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFRENSLTVT 376
Query: 292 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 351
RAE+ T G K +TFYV D +G VD K I+SIR+ IG T LQVK A P+++ T
Sbjct: 377 RAEVKTKGDKALNTFYVRDASGYQVDAKTIESIRQVIGQTILQVKGGNTDAKTSPQDSPT 436
Query: 352 GFFLGNFFKARTFQTFKLIRS 372
GF G FK+R+F F LIRS
Sbjct: 437 GFLFG-VFKSRSFVNFGLIRS 456
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L ++ ++ E +L+IK+A IS+ GG D F VTD GN V D ++D IR+ +G
Sbjct: 49 GILLEVVQVLTELNLTIKKAYISSDGGWFMDVFNVTDQDGNKVTDEIVLDYIRKSLG 105
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 79/174 (45%), Gaps = 16/174 (9%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + KD TVI + S ++ +L ++V LT++ + +++ F +
Sbjct: 25 PRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISSDGGWFMDVFNVT 84
Query: 232 HVDGLPISSEAERERVIQCLEA------AIERRASEGLE-------LELCTEDRVGLLSD 278
DG ++ E + + + L + R++ G++ +EL DR GLLS+
Sbjct: 85 DQDGNKVTDEIVLDYIRKSLGPDESTCFSPSMRSTIGVKQSVDYTVIELTGTDRPGLLSE 144
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTD--VTGNPVDPKIIDSIRRQIGH 330
+ + + ++ AEI T K VTD DP+ + IR+ +G+
Sbjct: 145 LCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLSKIRKLLGY 198
>gi|225425204|ref|XP_002266641.1| PREDICTED: uncharacterized protein LOC100250497 [Vitis vinifera]
gi|296088702|emb|CBI38152.3| unnamed protein product [Vitis vinifera]
Length = 447
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/378 (56%), Positives = 264/378 (69%), Gaps = 11/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G K+ + +V + IQQ L A SLR SVGV EHT+IE TG DRP
Sbjct: 77 MDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIELTGRDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I DP RL IK+LL V
Sbjct: 137 GLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPIDDPDRLVKIKQLLLYV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G D R A T++S G N +RRLHQ+M+ DRDY+ G D+S +P VTV N
Sbjct: 197 LKGDRDKRSANTAVSV-GSTNTQRRLHQMMYADRDYD---MDSGSTNDRS-KPLVTVENF 251
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+K YTV+ +R DRPKLLFD VCTLTDMQYVVFH V EAYQE+YIRHVDG PIS
Sbjct: 252 ADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIRHVDGCPIS 311
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAE++RVI CLEAAI RR SEG+ LELC+EDRVGLLSD+TRIFREN LS+ RAE++T G
Sbjct: 312 SEAEQQRVILCLEAAIRRRTSEGIRLELCSEDRVGLLSDVTRIFRENGLSVTRAEVTTRG 371
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + FYVTD +GNPV + I+++R++IG T L+VK + PP+E+ F LGN F
Sbjct: 372 SQAVNAFYVTDSSGNPVKSETIEAVRKEIGLTILRVKDDA-YSKSPPQESGR-FSLGNLF 429
Query: 360 KART---FQTFKLIRSYS 374
++R+ L+RSYS
Sbjct: 430 RSRSEKVLYNLGLMRSYS 447
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + T+I + S +R L ++V L DM ++ +++ F++
Sbjct: 24 PRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLIIRRAYISSDGEWFMDVFHVT 83
Query: 232 HVDGLPISSEAERERVIQCL-----------EAAIERRASEGLELELCTEDRVGLLSDIT 280
G +S + ER+ Q L + + A+E +EL DR GLLS++
Sbjct: 84 DQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIELTGRDRPGLLSEVF 143
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPVD 317
+ + ++ AE+ T ++ Y+T D TG P+D
Sbjct: 144 AVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPID 181
>gi|22138100|gb|AAM93430.1| ACR5 [Arabidopsis thaliana]
Length = 446
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 213/381 (55%), Positives = 271/381 (71%), Gaps = 11/381 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTSIEFTGTD 58
MDVFNV D DG K+ D+ V++YI++ L D S F+PS+RS++GV + ++T +E TGTD
Sbjct: 68 MDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTVVELTGTD 127
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 118
RPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS I++LL
Sbjct: 128 RPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLSKIRKLLG 187
Query: 119 NVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR-- 172
VL G FR+ KT++S + +R+LHQ+MF DRDY+ E V EDK R
Sbjct: 188 YVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDD-EDKCGRVI 246
Query: 173 PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P V V N+ + DY+++ ++ KDRPKLLFD V TLTDM YVV H ++ +AYQE+YIR
Sbjct: 247 PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQAYQEYYIR 306
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
H DG P+ SEAER+RVI+CL+AAI+RR SEGL+LELCT DRVGLLSD+TRIFRENSL++
Sbjct: 307 HTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFRENSLTVT 366
Query: 292 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 351
RAE+ T G K +TFYV D +G VD K I+SIR+ IG T LQVK A P+++ T
Sbjct: 367 RAEVKTKGDKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVKGGNTDAKPSPQDSPT 426
Query: 352 GFFLGNFFKARTFQTFKLIRS 372
GF G FK+R+F F LIRS
Sbjct: 427 GFLFG-VFKSRSFVNFGLIRS 446
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + KD TVI + S ++ +L ++V LT++ + +++ F +
Sbjct: 15 PRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISSDGGWFMDVFNVT 74
Query: 232 HVDGLPISSEAERERVIQCL---EAAI---ERRASEGLE-------LELCTEDRVGLLSD 278
DG ++ E E + + L E++ R++ G++ +EL DR GLLS+
Sbjct: 75 DQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTVVELTGTDRPGLLSE 134
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTD--VTGNPVDPKIIDSIRRQIGH 330
+ + + ++ AEI T K VTD DP+ + IR+ +G+
Sbjct: 135 LCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLSKIRKLLGY 188
>gi|18395601|ref|NP_565304.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|79316674|ref|NP_001030965.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|20197900|gb|AAD20075.2| putative uridylyl transferase [Arabidopsis thaliana]
gi|24030269|gb|AAN41308.1| putative uridylyl transferase [Arabidopsis thaliana]
gi|222424419|dbj|BAH20165.1| AT2G03730 [Arabidopsis thaliana]
gi|330250648|gb|AEC05742.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
gi|330250649|gb|AEC05743.1| ACT domain-containing protein 5 [Arabidopsis thaliana]
Length = 456
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/381 (55%), Positives = 271/381 (71%), Gaps = 11/381 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMPTEEHTSIEFTGTD 58
MDVFNV D DG K+ D+ V++YI++ L D S F+PS+RS++GV + ++T +E TGTD
Sbjct: 78 MDVFNVTDQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTVVELTGTD 137
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 118
RPGL SE+CAVL DL CNVVNAEIWTH +AAAV+ VTD T AI DP+RLS I++LL
Sbjct: 138 RPGLLSELCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLSKIRKLLG 197
Query: 119 NVLRGYDD---FRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR-- 172
VL G FR+ KT++S + +R+LHQ+MF DRDY+ E V EDK R
Sbjct: 198 YVLTGGSSGRRFREPKTTVSSALNETHTDRKLHQLMFADRDYDEWENNVDD-EDKCGRVI 256
Query: 173 PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P V V N+ + DY+++ ++ KDRPKLLFD V TLTDM YVV H ++ +AYQE+YIR
Sbjct: 257 PDVDVSNLHDLDYSIVMIKCKDRPKLLFDTVFTLTDMNYVVSHASIDAEGPQAYQEYYIR 316
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
H DG P+ SEAER+RVI+CL+AAI+RR SEGL+LELCT DRVGLLSD+TRIFRENSL++
Sbjct: 317 HTDGSPVKSEAERQRVIKCLKAAIQRRVSEGLKLELCTSDRVGLLSDVTRIFRENSLTVT 376
Query: 292 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 351
RAE+ T G K +TFYV D +G VD K I+SIR+ IG T LQVK A P+++ T
Sbjct: 377 RAEVKTKGDKALNTFYVRDASGYQVDTKTIESIRQVIGQTILQVKGGNTDAKPSPQDSPT 436
Query: 352 GFFLGNFFKARTFQTFKLIRS 372
GF G FK+R+F F LIRS
Sbjct: 437 GFLFG-VFKSRSFVNFGLIRS 456
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 81/174 (46%), Gaps = 16/174 (9%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + KD TVI + S ++ +L ++V LT++ + +++ F +
Sbjct: 25 PRVVIDNEVCKDVTVIKVDSANKHGILLEVVQVLTELNLTIKKAYISSDGGWFMDVFNVT 84
Query: 232 HVDGLPISSEAERERVIQCL---EAAI---ERRASEGLE-------LELCTEDRVGLLSD 278
DG ++ E E + + L E++ R++ G++ +EL DR GLLS+
Sbjct: 85 DQDGNKVTDEIVLEYIRKSLGPDESSCFSPSMRSTIGVKQSVDYTVVELTGTDRPGLLSE 144
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTD--VTGNPVDPKIIDSIRRQIGH 330
+ + + ++ AEI T K VTD DP+ + IR+ +G+
Sbjct: 145 LCAVLMDLQCNVVNAEIWTHRAKAAAVLQVTDEETCSAITDPERLSKIRKLLGY 198
>gi|195607434|gb|ACG25547.1| ACR4 [Zea mays]
Length = 458
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/375 (55%), Positives = 268/375 (71%), Gaps = 14/375 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TG
Sbjct: 82 MDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRXAVGVEPSSDHTLIELTG 141
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK
Sbjct: 142 TDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGR 201
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ-- 174
L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P
Sbjct: 202 LYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPV 259
Query: 175 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ++YIRH+
Sbjct: 260 VSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHI 319
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG P++SEAER+R+IQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RA
Sbjct: 320 DGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRA 379
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP---KETT 350
E+ST G + +TFYV D G+ V+ + +++IR++IG T LQVK PKPP +++
Sbjct: 380 EVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP-EQPKPPVAAQDSP 438
Query: 351 TGFFLGN-FFKARTF 364
T F + F+ R+
Sbjct: 439 TRFLFSSLLFRPRSL 453
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VT+ N + TVI + S ++ +L ++V LTD++ +V +++ F +
Sbjct: 29 PRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVT 88
Query: 232 HVDGLPISSEAERERVIQCLEAAI--------ERRASEGLE-------LELCTEDRVGLL 276
+ G I+ E+ + + + +I RR + G+E +EL DR GLL
Sbjct: 89 NQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRXAVGVEPSSDHTLIELTGTDRPGLL 148
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
S+++ + ++ AE+ T G+ VTD
Sbjct: 149 SEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTD 182
>gi|226492720|ref|NP_001142223.1| uncharacterized protein LOC100274391 [Zea mays]
gi|194707686|gb|ACF87927.1| unknown [Zea mays]
gi|223947587|gb|ACN27877.1| unknown [Zea mays]
gi|414867235|tpg|DAA45792.1| TPA: ACR4 [Zea mays]
Length = 458
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/375 (55%), Positives = 268/375 (71%), Gaps = 14/375 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TG
Sbjct: 82 MDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTG 141
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK
Sbjct: 142 TDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGR 201
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ-- 174
L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P
Sbjct: 202 LYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPV 259
Query: 175 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ++YIRH+
Sbjct: 260 VSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHI 319
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG P++SEAER+R+IQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RA
Sbjct: 320 DGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRA 379
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP---KETT 350
E+ST G + +TFYV D G+ V+ + +++IR++IG T LQVK PKPP +++
Sbjct: 380 EVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVK-GHPEQPKPPVAAQDSP 438
Query: 351 TGFFLGN-FFKARTF 364
T F + F+ R+
Sbjct: 439 TRFLFSSLLFRPRSL 453
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VT+ N + TVI + S ++ +L ++V LTD++ +V +++ F +
Sbjct: 29 PRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVT 88
Query: 232 HVDGLPISSEAERERVIQCLEAAI--------ERRASEGLE-------LELCTEDRVGLL 276
+ G I+ E+ + + + +I RR + G+E +EL DR GLL
Sbjct: 89 NQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRPGLL 148
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
S+++ + ++ AE+ T G+ VTD
Sbjct: 149 SEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTD 182
>gi|414867234|tpg|DAA45791.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 459
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 208/375 (55%), Positives = 268/375 (71%), Gaps = 14/375 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TG
Sbjct: 83 MDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTG 142
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK
Sbjct: 143 TDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGR 202
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ-- 174
L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P
Sbjct: 203 LYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPV 260
Query: 175 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ++YIRH+
Sbjct: 261 VSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHI 320
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG P++SEAER+R+IQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RA
Sbjct: 321 DGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRA 380
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP---KETT 350
E+ST G + +TFYV D G+ V+ + +++IR++IG T LQVK PKPP +++
Sbjct: 381 EVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVK-GHPEQPKPPVAAQDSP 439
Query: 351 TGFFLGN-FFKARTF 364
T F + F+ R+
Sbjct: 440 TRFLFSSLLFRPRSL 454
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VT+ N + TVI + S ++ +L ++V LTD++ +V +++ F +
Sbjct: 30 PRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVT 89
Query: 232 HVDGLPISSEAERERVIQCLEAAI--------ERRASEGLE-------LELCTEDRVGLL 276
+ G I+ E+ + + + +I RR + G+E +EL DR GLL
Sbjct: 90 NQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRPGLL 149
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
S+++ + ++ AE+ T G+ VTD
Sbjct: 150 SEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTD 183
>gi|414867236|tpg|DAA45793.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 433
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/375 (55%), Positives = 268/375 (71%), Gaps = 14/375 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TG
Sbjct: 57 MDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTG 116
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK
Sbjct: 117 TDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGR 176
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ-- 174
L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P
Sbjct: 177 LYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPV 234
Query: 175 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ++YIRH+
Sbjct: 235 VSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHI 294
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG P++SEAER+R+IQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RA
Sbjct: 295 DGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRA 354
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP---KETT 350
E+ST G + +TFYV D G+ V+ + +++IR++IG T LQVK PKPP +++
Sbjct: 355 EVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVK-GHPEQPKPPVAAQDSP 413
Query: 351 TGFFLGN-FFKARTF 364
T F + F+ R+
Sbjct: 414 TRFLFSSLLFRPRSL 428
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VT+ N + TVI + S ++ +L ++V LTD++ +V +++ F +
Sbjct: 4 PRVTIDNTSCPNATVIHVDSANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDVFTVT 63
Query: 232 HVDGLPISSEAERERVIQCLEAAI--------ERRASEGLE-------LELCTEDRVGLL 276
+ G I+ E+ + + + +I RR + G+E +EL DR GLL
Sbjct: 64 NQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDRPGLL 123
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
S+++ + ++ AE+ T G+ VTD
Sbjct: 124 SEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTD 157
>gi|147855097|emb|CAN83845.1| hypothetical protein VITISV_001862 [Vitis vinifera]
Length = 465
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 210/364 (57%), Positives = 258/364 (70%), Gaps = 8/364 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G K+ + +V + IQQ L A SLR SVGV EHT+IE TG DRP
Sbjct: 77 MDVFHVTDQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIELTGRDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I DP RL IK+LL V
Sbjct: 137 GLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPIDDPDRLVKIKQLLLYV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G D R A T++S G N +RRLHQ+M+ DRDY+ G D+S +P VTV N
Sbjct: 197 LKGDRDKRSANTAVSV-GSTNTQRRLHQMMYADRDYD---MDSGSTNDRS-KPLVTVENF 251
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+K YTV+ +R DRPKLLFD VCTLTDMQYVVFH V EAYQE+YIRHVDG PIS
Sbjct: 252 ADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVFHATVIAEGPEAYQEYYIRHVDGCPIS 311
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAE++RVI CLEAAI RR SEG+ LELC+EDRVGLLSD+TRIFREN LS+ RAE++T G
Sbjct: 312 SEAEQQRVILCLEAAIRRRTSEGIRLELCSEDRVGLLSDVTRIFRENGLSVTRAEVTTRG 371
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + FYVTD +GNPV + I+++R++IG T L+VK + PP+E+ F LGN F
Sbjct: 372 SQAVNAFYVTDSSGNPVKSETIEAVRKEIGLTILRVKDDA-YSKSPPQESGR-FSLGNLF 429
Query: 360 KART 363
++R+
Sbjct: 430 RSRS 433
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + T+I + S +R L ++V L DM ++ +++ F++
Sbjct: 24 PRVTVDNASSRTATLIKVDSANRRGSLLEVVQVLNDMDLIIRRAYISSDGEWFMDVFHVT 83
Query: 232 HVDGLPISSEAERERVIQCL-----------EAAIERRASEGLELELCTEDRVGLLSDIT 280
G +S + ER+ Q L + + A+E +EL DR GLLS++
Sbjct: 84 DQKGNKLSEDDVAERIQQSLGPRARSFRSLRRSVGVQAANEHTTIELTGRDRPGLLSEVF 143
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPVD 317
+ + ++ AE+ T ++ Y+T D TG P+D
Sbjct: 144 AVLADLKCNVVAAEVWTHNSRMASVVYITDDETGLPID 181
>gi|219885449|gb|ACL53099.1| unknown [Zea mays]
gi|414867237|tpg|DAA45794.1| TPA: hypothetical protein ZEAMMB73_762765 [Zea mays]
Length = 440
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 208/375 (55%), Positives = 268/375 (71%), Gaps = 14/375 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVF V + G KI D+ V+ DYI + + D+ F PS R +VGV P+ +HT IE TG
Sbjct: 64 MDVFTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTG 123
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL L CNVV+AE+WTHN RAAAV+ VTD +G A+ D +R+ IK
Sbjct: 124 TDRPGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTDRESGLAVSDAERVGRIKGR 183
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ-- 174
L+NV RG R AKT+++ G + ERRLHQ+MF+DRDYER K GR S P
Sbjct: 184 LYNVFRGRS--RDAKTAVATTGATHPERRLHQMMFEDRDYERRGKDDGRAAASGSNPGPV 241
Query: 175 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
V+V+N ++K Y+V+T+R +DRPKLLFD VCTLTDMQYVVFHG V+T EAYQ++YIRH+
Sbjct: 242 VSVVNWLQKYYSVVTVRCRDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPEAYQDYYIRHI 301
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG P++SEAER+R+IQCLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RA
Sbjct: 302 DGCPVNSEAERKRIIQCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRA 361
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP---KETT 350
E+ST G + +TFYV D G+ V+ + +++IR++IG T LQVK PKPP +++
Sbjct: 362 EVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQTVLQVKGHP-EQPKPPVAAQDSP 420
Query: 351 TGFFLGN-FFKARTF 364
T F + F+ R+
Sbjct: 421 TRFLFSSLLFRPRSL 435
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 71/158 (44%), Gaps = 24/158 (15%)
Query: 168 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
D +S P TV++++ S ++ +L ++V LTD++ +V +++
Sbjct: 16 DNTSCPNATVIHVD---------SANKYGILLEVVQVLTDLKLIVKKAYISSDGGWFMDV 66
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAI--------ERRASEGLE-------LELCTEDR 272
F + + G I+ E+ + + + +I RR + G+E +EL DR
Sbjct: 67 FTVTNQSGHKITDESVLQGIKDYIYKSIGPDSCFLPSRRRAVGVEPSSDHTLIELTGTDR 126
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
GLLS+++ + ++ AE+ T G+ VTD
Sbjct: 127 PGLLSEVSAVLTSLECNVVSAELWTHNGRAAAVMQVTD 164
>gi|356502450|ref|XP_003520032.1| PREDICTED: uncharacterized protein LOC100798999 [Glycine max]
Length = 556
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 213/378 (56%), Positives = 270/378 (71%), Gaps = 8/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +GKK +V D IQQ L AS SLR SVGV EHT+IE TG DRP
Sbjct: 183 MDVFHVTDPNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRP 242
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL CNVV AE+WTHN R A+VV++TD +TG +I DP RL+ IK+LL V
Sbjct: 243 GLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKIKQLLLYV 302
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G D + A T++S G +++RRLHQ+M+ DRDY+ + G D++ + VTV +
Sbjct: 303 LKGDIDKKSANTAVSV-GSTHKDRRLHQLMYADRDYDVDDGDSGSTSDRN-KLLVTVDDC 360
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
I+K YTV+ +R DRPKLLFD VCTLTDMQYVV+HG V EAYQE+YIRHVDG PIS
Sbjct: 361 IDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGSPIS 420
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVI CLEAAI RR SEG++LELC EDRVGLLSD+TRIFREN LS+ RAE++T G
Sbjct: 421 SEAERQRVIHCLEAAIRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRG 480
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + FYVTDV+GNPV+ + I+++R++IG T L VK + KPP + + F L N F
Sbjct: 481 TQAMNVFYVTDVSGNPVNSETIEAVRKEIGLTILHVKDD--VCSKPPPQESGKFSLSNLF 538
Query: 360 KART---FQTFKLIRSYS 374
++ + L++SYS
Sbjct: 539 RSSSEKFLYNLGLMKSYS 556
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 12/145 (8%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 244
TVI + S ++ L ++V LTDM V +++ F++ +G +
Sbjct: 143 TVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFHVTDPNGKKFMQDDVA 202
Query: 245 ERVIQCLEAAIE-----RRA------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
+R+ Q L RR+ +E +EL DR GLLS++ + + ++ A
Sbjct: 203 DRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSEVFAVLADLKCNVVAA 262
Query: 294 EISTIGGKVKDTFYVTD-VTGNPVD 317
E+ T ++ Y+TD TG +D
Sbjct: 263 EVWTHNSRMASVVYITDEATGLSID 287
>gi|356568931|ref|XP_003552661.1| PREDICTED: uncharacterized protein LOC100816426 [Glycine max]
Length = 450
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 212/378 (56%), Positives = 269/378 (71%), Gaps = 8/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +GKK +V D IQQ L AS SLR SVGV EHT+IE TG DRP
Sbjct: 77 MDVFHVTDQNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL CNVV AE+WTHN R A+VV++TD +TG +I DP RL+ IK+LL V
Sbjct: 137 GLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSIDDPDRLAKIKQLLLYV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G D + A T++S G +++RRLHQ+M+ DRDY+ + G D++ + VTV +
Sbjct: 197 LKGDIDKKSANTAVSV-GSTHKDRRLHQLMYADRDYDVDDGDSGSTSDRN-KLLVTVDDC 254
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
I+K YTV+ +R DRPKLLFD VCTLTDMQYVV+HG V EAYQE+YIRHVDG PIS
Sbjct: 255 IDKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTVIAEGPEAYQEYYIRHVDGSPIS 314
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVI CLEAA+ RR SEG++LELC EDRVGLLSD+TRIFREN LS+ RAE++T G
Sbjct: 315 SEAERQRVIHCLEAAVRRRTSEGIKLELCGEDRVGLLSDVTRIFRENGLSVNRAEVTTRG 374
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + FYVTDV+GNPV + I+++R++IG T L VK + KPP + + F L N F
Sbjct: 375 SQAMNVFYVTDVSGNPVKSETIETVRKEIGLTILHVKDD--VCSKPPPQESGKFSLSNLF 432
Query: 360 KART---FQTFKLIRSYS 374
++ + L++SYS
Sbjct: 433 RSSSEKFLYNLGLMKSYS 450
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 13/158 (8%)
Query: 173 PQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V V NI TVI + S ++ L ++V LTDM V +++ F++
Sbjct: 24 PRVAVDNISSGTDTVIKVDSANKRGSLLEVVQVLTDMNLSVRRAYISSDGEWFMDVFHVT 83
Query: 232 HVDGLPISSEAERERVIQCL--EAAIER--RASEGLE-------LELCTEDRVGLLSDIT 280
+G + +R+ Q L A+ R R S G++ +EL DR GLLS++
Sbjct: 84 DQNGKKFMQDDVADRIQQSLGPRASSFRSLRRSVGVQAEAEHTTIELTGRDRPGLLSEVF 143
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPVD 317
+ + ++ AE+ T ++ Y+TD TG +D
Sbjct: 144 AVLADLKCNVVAAEVWTHNSRMASVVYITDEATGLSID 181
>gi|242040599|ref|XP_002467694.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
gi|241921548|gb|EER94692.1| hypothetical protein SORBIDRAFT_01g032575 [Sorghum bicolor]
Length = 427
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 211/383 (55%), Positives = 270/383 (70%), Gaps = 23/383 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVFNV + G KI D+ V+ D I + + D+ PS R ++GV P+ ++T IE TG
Sbjct: 57 MDVFNVTNQGGHKIMDESVLEGIKDCIYKSIGPDSCLLPSRRRAIGVEPSSDYTLIELTG 116
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL +L CNVVNAE+WTHN+RAAAV+ VTD +G AI D +RL IKE
Sbjct: 117 TDRPGLLSEVSAVLTNLECNVVNAELWTHNERAAAVMQVTDRKSGLAISDAERLGRIKER 176
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK--AVGRVEDKSSRPQ 174
L NV +G R AKT+++ GI + ERRLHQ+M +DRDY+R +K A G S
Sbjct: 177 LCNVFKGRS--RDAKTTVAM-GITHTERRLHQMMLEDRDYDRHDKDRASG-----SPTSM 228
Query: 175 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
V+V+N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T +AYQ++YIRH+
Sbjct: 229 VSVVNWLQKDYSVVTIRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGPDAYQDYYIRHI 288
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG P++SEAER+R+I CLEAAIERR SEGL+LEL T DRVGLLSD+TRIFREN L++ RA
Sbjct: 289 DGSPVNSEAERKRIIHCLEAAIERRVSEGLKLELSTGDRVGLLSDVTRIFRENGLTVTRA 348
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK----ET 349
E+ST G K +TFYV D G+ V+ K +++IR++IG T LQVK P PK E+
Sbjct: 349 EVSTKGDKAINTFYVRDAAGSSVELKTLEAIRQEIGQTVLQVKGH----PDQPKSLTQES 404
Query: 350 TTGFFLGNFFKARTFQTFKLIRS 372
T F + F+ R+ LI S
Sbjct: 405 PTRFLFSSLFRPRSLCNLGLIGS 427
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 71/154 (46%), Gaps = 16/154 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VT+ N + TVI + S ++ +L ++V LTD++ +V +++ F +
Sbjct: 4 PRVTIDNTSCPNATVIHVDSANKYGVLLEVVQVLTDLKLIVKKAYISSDGGWFMDVFNVT 63
Query: 232 HVDGLPISSEAERERVIQCLEAAI--------ERRASEGLE-------LELCTEDRVGLL 276
+ G I E+ E + C+ +I RR + G+E +EL DR GLL
Sbjct: 64 NQGGHKIMDESVLEGIKDCIYKSIGPDSCLLPSRRRAIGVEPSSDYTLIELTGTDRPGLL 123
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
S+++ + ++ AE+ T + VTD
Sbjct: 124 SEVSAVLTNLECNVVNAELWTHNERAAAVMQVTD 157
>gi|242038905|ref|XP_002466847.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
gi|241920701|gb|EER93845.1| hypothetical protein SORBIDRAFT_01g015160 [Sorghum bicolor]
Length = 453
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/377 (54%), Positives = 262/377 (69%), Gaps = 10/377 (2%)
Query: 1 MDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H IE TG
Sbjct: 81 MDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNVIELTG 140
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD T A+ D +RL I+E
Sbjct: 141 TDRPGLLSEVSAVLASLKCNVVSAEIWTHNARAAAVMRVTDEDTRLAVTDTERLERIREK 200
Query: 117 LFNVLRGYDDFRKAKTSLSP-PGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L +LRG + R A ++S + ERRLHQ+M DD DYE++++ +S RP V
Sbjct: 201 LSYLLRGGNLSRGAAMAVSSGTATTHTERRLHQMMLDDCDYEQLQQLA---PGQSQRPNV 257
Query: 176 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
TV N +KDY+V+T+R KDRPKLLFD VCTLTD+QYVVFH ++ +AYQEFY+RHV+
Sbjct: 258 TVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVRHVN 317
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G P+++E ER RVIQCLEAAIERR SEG++LELCT D+VGLLS++TRIFRENSL++ RAE
Sbjct: 318 GSPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTRAE 377
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 354
++T G +TFYV TG VD K IDSIR+ IGH+ LQVK KE+ T F
Sbjct: 378 VTTRGRMAVNTFYVRGSTGEDVDQKAIDSIRQAIGHS-LQVKGQPEPQEAQKKESPTWFL 436
Query: 355 LGNFFKARTFQTFKLIR 371
N F+ R+ +F +R
Sbjct: 437 FANLFRPRSLYSFGFMR 453
>gi|357121213|ref|XP_003562315.1| PREDICTED: uncharacterized protein LOC100840593 [Brachypodium
distachyon]
Length = 453
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/375 (53%), Positives = 261/375 (69%), Gaps = 10/375 (2%)
Query: 1 MDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVFN+ D +GKK++DK ++ DYI++ L D+ + P+ R SV V + H IE TG
Sbjct: 80 MDVFNITDKEGKKLKDKATLAQIEDYIRKSLGADSRYLPARRRSVDVAASANHNVIELTG 139
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVLA+L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL IKE
Sbjct: 140 TDRPGLLSEVSAVLANLKCNVVSAEIWTHNTRAAAVMQVTDQDTGLAVTDTERLERIKER 199
Query: 117 LFNVLRGYDDFRKAKTSLSP-PGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L +LRG + R A ++S + ERRLHQ+M DD D E++++ ++S RP V
Sbjct: 200 LSYLLRGGNLSRGAAMAVSSGTSTTHTERRLHQMMLDDGDCEQLQR---HASNQSQRPNV 256
Query: 176 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
TV N +KDY+V+T+R KDRPKLLFD VCTLTD+ YVVFH ++ +AYQEFY+RHV+
Sbjct: 257 TVRNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDANDNQAYQEFYVRHVN 316
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G P+++EAER RV+QCLEAAIERR EG++LELCT D+VGLLS++TRIFRENSL++ RAE
Sbjct: 317 GSPMNTEAERLRVVQCLEAAIERRVWEGMKLELCTNDKVGLLSEVTRIFRENSLTVTRAE 376
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 354
+ST G +TFYV G VD K IDSIR++IGH +QVK + KE+ T F
Sbjct: 377 VSTRGRTAVNTFYVCGSAGEAVDQKTIDSIRQEIGH-NIQVKGQPEPSEPQKKESPTWFL 435
Query: 355 LGNFFKARTFQTFKL 369
N F+ R+ + +
Sbjct: 436 FANLFRPRSLYSLGM 450
>gi|414871684|tpg|DAA50241.1| TPA: hypothetical protein ZEAMMB73_737306 [Zea mays]
Length = 442
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/377 (54%), Positives = 261/377 (69%), Gaps = 12/377 (3%)
Query: 1 MDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H IE TG
Sbjct: 72 MDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNIIELTG 131
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL I+E
Sbjct: 132 TDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERLERIREK 191
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 176
L + RG + R A S S + ERRLHQ+M DD DYE++++ + +S RP VT
Sbjct: 192 LSYLFRGGNLSRGATVS-SRTATTHTERRLHQMMLDDGDYEQLQR---QAPGQSQRPNVT 247
Query: 177 VLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
V N +KDY+V+T+R KDR KLLFD VCTLTD+QYVVFH ++ +AYQEFY+RHV+G
Sbjct: 248 VRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVRHVNG 307
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
P+++E ER RVIQCLEAAIERR SEG++LELCT D+VGLLS++TRIFRENSL++ RAE+
Sbjct: 308 SPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTRAEV 367
Query: 296 STIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP-PKETTTGFF 354
+T G +TFYV G VD K IDSIR IGH+ LQVK P+P KE+ T F
Sbjct: 368 TTRGRMAVNTFYVRGSAGEAVDQKAIDSIREAIGHS-LQVK-GQAEPPEPQKKESPTWFL 425
Query: 355 LGNFFKARTFQTFKLIR 371
N F+ R+ +F +R
Sbjct: 426 FANLFRPRSLYSFGFMR 442
>gi|212274877|ref|NP_001130980.1| uncharacterized protein LOC100192085 [Zea mays]
gi|194689578|gb|ACF78873.1| unknown [Zea mays]
gi|194690618|gb|ACF79393.1| unknown [Zea mays]
gi|194701104|gb|ACF84636.1| unknown [Zea mays]
gi|195614180|gb|ACG28920.1| ACR4 [Zea mays]
gi|223949731|gb|ACN28949.1| unknown [Zea mays]
gi|414871683|tpg|DAA50240.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/377 (54%), Positives = 261/377 (69%), Gaps = 12/377 (3%)
Query: 1 MDVFNVIDCDGKKIRDK----EVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVFNV D +GKKI+D+ ++ DYI++ L D+ + PS R SV V +H IE TG
Sbjct: 81 MDVFNVTDKEGKKIKDEATLTQIEDYIRKSLGADSRYIPSRRRSVDVAAAADHNIIELTG 140
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVL L CNVV+AEIWTHN RAAAV+ VTD TG A+ D +RL I+E
Sbjct: 141 TDRPGLLSEVSAVLTSLKCNVVSAEIWTHNTRAAAVMRVTDEDTGLAVTDAERLERIREK 200
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 176
L + RG + R A S S + ERRLHQ+M DD DYE++++ + +S RP VT
Sbjct: 201 LSYLFRGGNLSRGATVS-SRTATTHTERRLHQMMLDDGDYEQLQR---QAPGQSQRPNVT 256
Query: 177 VLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
V N +KDY+V+T+R KDR KLLFD VCTLTD+QYVVFH ++ +AYQEFY+RHV+G
Sbjct: 257 VRNWNDKDYSVVTIRCKDRSKLLFDTVCTLTDLQYVVFHANIDAKDNQAYQEFYVRHVNG 316
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
P+++E ER RVIQCLEAAIERR SEG++LELCT D+VGLLS++TRIFRENSL++ RAE+
Sbjct: 317 SPMNTETERLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTRAEV 376
Query: 296 STIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP-PKETTTGFF 354
+T G +TFYV G VD K IDSIR IGH+ LQVK P+P KE+ T F
Sbjct: 377 TTRGRMAVNTFYVRGSAGEAVDQKAIDSIREAIGHS-LQVK-GQAEPPEPQKKESPTWFL 434
Query: 355 LGNFFKARTFQTFKLIR 371
N F+ R+ +F +R
Sbjct: 435 FANLFRPRSLYSFGFMR 451
>gi|255547636|ref|XP_002514875.1| amino acid binding protein, putative [Ricinus communis]
gi|223545926|gb|EEF47429.1| amino acid binding protein, putative [Ricinus communis]
Length = 450
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/378 (53%), Positives = 262/378 (69%), Gaps = 8/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G K+ + +V + IQQ L A SLR SVGV E+T+IE TG DRP
Sbjct: 77 MDVFHVTDQHGNKLSEDDVAERIQQSLGPRACSFRSLRRSVGVQTASENTTIELTGRDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL CNVV AE+WTHN R A+VV++TD TG I +P RL+ IK+LL V
Sbjct: 137 GLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEVTGSPINEPDRLTKIKQLLLYV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G D R A T++S G ++ERRLHQ+M+ DRDY+ ++ G + +P VTV N
Sbjct: 197 LKGDRDKRSANTAVSV-GSTHKERRLHQMMYADRDYD-IDDGEGGSTSERRKPLVTVENC 254
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+K YTV+ +R DRPKLLFD VCTLTDMQYVV+H + EAYQE+YIRH+DG PIS
Sbjct: 255 ADKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEGPEAYQEYYIRHMDGSPIS 314
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVI CLEAAI RR EG+ LELC+EDR+GLLS++TRIFREN LS+ RAE++T
Sbjct: 315 SEAERQRVINCLEAAIRRRNPEGIRLELCSEDRIGLLSEVTRIFRENGLSVTRAEVTTRD 374
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + FYVTD +G PV + I+++R++IG T L+VK + PP+E F LGN F
Sbjct: 375 SQAVNAFYVTDASGYPVKSETIEAVRKEIGLTILRVKDDS--NSPPPQEERGRFSLGNIF 432
Query: 360 KART---FQTFKLIRSYS 374
++R+ LI+SYS
Sbjct: 433 RSRSEKFLYNLGLIKSYS 450
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 77/158 (48%), Gaps = 13/158 (8%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + T+I + S ++ L ++V LTD+ ++ +++ F++
Sbjct: 24 PRVTVDNATSRKATLIKVDSANKRGSLLEVVQVLTDLDLLIRRAYISSDGEWFMDVFHVT 83
Query: 232 HVDGLPISSEAERERVIQ------CLEAAIERR-----ASEGLELELCTEDRVGLLSDIT 280
G +S + ER+ Q C ++ R ASE +EL DR GLLS++
Sbjct: 84 DQHGNKLSEDDVAERIQQSLGPRACSFRSLRRSVGVQTASENTTIELTGRDRPGLLSEVF 143
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPVD 317
+ + ++ AE+ T ++ Y+TD VTG+P++
Sbjct: 144 AVLADLKCNVVAAEVWTHNSRMASVVYITDEVTGSPIN 181
>gi|449468820|ref|XP_004152119.1| PREDICTED: uncharacterized protein LOC101215960 [Cucumis sativus]
Length = 449
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/378 (54%), Positives = 260/378 (68%), Gaps = 8/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +GKK+ D V + IQQ L A SLR SVGV EHT+IE +G DRP
Sbjct: 76 MDVFHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELSGRDRP 135
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL DL CNVV AE+WTHN R A+VV++TD ++G I DP L+ IK+LL V
Sbjct: 136 GLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQLLLYV 195
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G D A T++S ++ERRLHQ+M+ DRD++ + E SRP VTV N
Sbjct: 196 LKGDRDKHSANTAVSMNS-THKERRLHQMMYADRDFDLNYTSCS--ESYQSRPLVTVENC 252
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+EK YTV+ +R DRPKLLFD VCTLTDMQYVV+H + EAYQE++IRHVDG PIS
Sbjct: 253 VEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIRHVDGSPIS 312
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVI CLEAAI RR +EG++LELC+EDRVGLL+D+TRIFREN LS+ RAE++T G
Sbjct: 313 SEAERQRVIHCLEAAIRRRTTEGIKLELCSEDRVGLLTDVTRIFRENGLSVTRAEVTTRG 372
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + FYVTD +GN V + I ++R IG T L VK + PP+E +GF LGN F
Sbjct: 373 TQAVNVFYVTDASGNSVRSETIKAVREAIGLTILHVKDDEQQSKCPPQE-GSGFSLGNLF 431
Query: 360 KART---FQTFKLIRSYS 374
++R+ LI+S S
Sbjct: 432 RSRSEKVLYNLGLIKSCS 449
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V++ N + T+I + S +R L ++V LTD+ ++ +++ F++
Sbjct: 23 PRVSIDNTSSRKATLIKVDSSNRHGSLLEVVQVLTDLNLIIRRAYISSDGEWFMDVFHVT 82
Query: 232 HVDGLPISSEAERERVIQCL-----------EAAIERRASEGLELELCTEDRVGLLSDIT 280
+G + + ER+ Q L + + A+E +EL DR GLLS++
Sbjct: 83 DQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELSGRDRPGLLSEVF 142
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRR 326
+ + ++ AE+ T ++ Y+T D +G P+ DP + I++
Sbjct: 143 AVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQ 190
>gi|449484676|ref|XP_004156949.1| PREDICTED: uncharacterized LOC101215960 [Cucumis sativus]
Length = 449
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 205/378 (54%), Positives = 259/378 (68%), Gaps = 8/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDV +V D +GKK+ D V + IQQ L A SLR SVGV EHT+IE +G DRP
Sbjct: 76 MDVLHVTDQNGKKLCDDGVGERIQQSLGPRARSFRSLRRSVGVQAAAEHTTIELSGRDRP 135
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL DL CNVV AE+WTHN R A+VV++TD ++G I DP L+ IK+LL V
Sbjct: 136 GLLSEVFAVLTDLKCNVVAAEVWTHNSRMASVVYITDDTSGMPIDDPDWLAKIKQLLLYV 195
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G D A T++S ++ERRLHQ+M+ DRD++ + E SRP VTV N
Sbjct: 196 LKGDRDKHSANTAVSMNS-THKERRLHQMMYADRDFDLNYTSCS--ESYQSRPLVTVENC 252
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+EK YTV+ +R DRPKLLFD VCTLTDMQYVV+H + EAYQE++IRHVDG PIS
Sbjct: 253 VEKGYTVVNLRCPDRPKLLFDTVCTLTDMQYVVYHATIIAEEPEAYQEYFIRHVDGSPIS 312
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVI CLEAAI RR +EG++LELC+EDRVGLL+D+TRIFREN LS+ RAE++T G
Sbjct: 313 SEAERQRVIHCLEAAIRRRTTEGIKLELCSEDRVGLLTDVTRIFRENGLSVTRAEVTTRG 372
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + FYVTD +GN V + I ++R IG T L VK + PP+E +GF LGN F
Sbjct: 373 TQAVNVFYVTDASGNSVRSETIKAVREAIGLTILHVKDDEQQSKCPPQE-GSGFSLGNLF 431
Query: 360 KART---FQTFKLIRSYS 374
++R+ LI+S S
Sbjct: 432 RSRSEKVLYNLGLIKSCS 449
>gi|294460934|gb|ADE76039.1| unknown [Picea sitchensis]
Length = 454
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 208/385 (54%), Positives = 263/385 (68%), Gaps = 19/385 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPS-----LRSSVGVMPTEEHTSIEFT 55
MDVF+V D G K+ D+ +IDYIQQ L + + L +VGV EHT+IE T
Sbjct: 76 MDVFHVTDQLGNKLTDQRIIDYIQQALGAKQGGSTTEVKTCLGRTVGVQSIGEHTAIELT 135
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
GTDRPGL SE+ AVL +L CNVV AE+WTHN R A VV+VTD ST I++P++L+ IKE
Sbjct: 136 GTDRPGLLSEISAVLTNLKCNVVAAEVWTHNMRVACVVYVTDESTSRPIEEPEQLAAIKE 195
Query: 116 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L NVL+G DD R KT S G+ + ERRLHQ+MF DRDYE + R ++ RP +
Sbjct: 196 QLSNVLKGNDDRRGVKTDFSM-GLTHTERRLHQMMFADRDYEGPDT---RSLGENGRPII 251
Query: 176 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
+ N EK Y+V+T+ KDRPKLLFD VCTLTDMQYVV H + + T A QE+YIRH+D
Sbjct: 252 KIENCNEKGYSVVTVHCKDRPKLLFDTVCTLTDMQYVVLHATITSSGTYALQEYYIRHMD 311
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G + +E E++RVI+CLEAAIERR SEG+ LELCT DRVGLLSDITRIFREN LS+ RA+
Sbjct: 312 GCTLDTEGEKQRVIKCLEAAIERRVSEGVRLELCTSDRVGLLSDITRIFRENGLSVTRAD 371
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG-- 352
++T K + FYVTD +GNPVD KI++++RR+IGHT LQVK +I + P T TG
Sbjct: 372 VTTRADKAVNVFYVTDTSGNPVDMKIVEAMRREIGHTILQVK--SIPSSPRPCPTDTGDK 429
Query: 353 --FFLGNFFKA---RTFQTFKLIRS 372
F G+ K+ R F LI+S
Sbjct: 430 AKFSFGSLLKSQLERLSYNFGLIKS 454
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV---------------VFHGM 216
P V + N +D +++ + S +R +L ++V LTD+ + VFH
Sbjct: 23 PMVCIDNDTCEDCSLVKVESANRHGILLEVVQVLTDLDLIISKAYISSDGRWFMDVFHVT 82
Query: 217 VNTGRTEAYQEF--YIRHVDGLPISSEAERERVIQCLEAAIERRA-SEGLELELCTEDRV 273
G Q YI+ L V CL + ++ E +EL DR
Sbjct: 83 DQLGNKLTDQRIIDYIQQ--ALGAKQGGSTTEVKTCLGRTVGVQSIGEHTAIELTGTDRP 140
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRRQIGH 330
GLLS+I+ + ++ AE+ T +V YVTD T P+ +P+ + +I+ Q+ +
Sbjct: 141 GLLSEISAVLTNLKCNVVAAEVWTHNMRVACVVYVTDESTSRPIEEPEQLAAIKEQLSN 199
>gi|326500948|dbj|BAJ95140.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/382 (52%), Positives = 264/382 (69%), Gaps = 20/382 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D I YIQ+ LE + + P +R++VG++P+E++TSIE TGTDRP
Sbjct: 73 MDVFNVTDRDGNKVLDTPTISYIQKTLEAEDCYYPEVRNTVGIVPSEDYTSIELTGTDRP 132
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD--HSTGYAIKDPKRLSTIKELLF 118
GL SEVCAVLA + C V +AE+WTHN R AAVV VTD + G AI+D R++ I L
Sbjct: 133 GLLSEVCAVLAGMQCAVRSAELWTHNTRVAAVVQVTDAAKAAGGAIEDDARIADISRRLD 192
Query: 119 NVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL 178
N+LRG + R A + + ++ERRLHQ+MF+DRDY G R +V+V
Sbjct: 193 NLLRGQNGVRAAAAA----SLTHKERRLHQMMFEDRDY-------GAAGPPDPRTEVSVT 241
Query: 179 NI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVDGL 236
+ E+ YTV+ +R +DRPKLLFD VCT+TDMQYVV HG V++ AYQE+YIRHVDG
Sbjct: 242 HCAERGYTVVVVRCRDRPKLLFDTVCTITDMQYVVHHGTVSSEPAGGAYQEYYIRHVDGH 301
Query: 237 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
P+S+EAER RV+QCLEAA+ERR ++GLELE+ T+DR GLLSD+TRIFREN L+I+RAEIS
Sbjct: 302 PVSTEAERRRVVQCLEAAVERRTADGLELEVRTDDRAGLLSDVTRIFRENGLTIRRAEIS 361
Query: 297 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTIL----APKPPKETTTG 352
+ G+ DTFY++D G+PV+ K I++IR QIG L+VK + + + +T
Sbjct: 362 SEDGEAVDTFYLSDPQGHPVEAKTIEAIRAQIGEATLRVKNNPLADDGGSTSEVAAGSTA 421
Query: 353 FFLGNFFK-ARTFQTFKLIRSY 373
F GN FK R FQ F LI+ Y
Sbjct: 422 FLFGNLFKFYRPFQNFGLIKLY 443
>gi|115454015|ref|NP_001050608.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|28875985|gb|AAO59994.1| putative ACT domain repeat protein [Oryza sativa Japonica Group]
gi|108709666|gb|ABF97461.1| ACT domain containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113549079|dbj|BAF12522.1| Os03g0598100 [Oryza sativa Japonica Group]
gi|125860402|dbj|BAF46924.1| ACT-domain repeat protein 5 [Oryza sativa Japonica Group]
gi|222625325|gb|EEE59457.1| hypothetical protein OsJ_11646 [Oryza sativa Japonica Group]
Length = 453
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/375 (53%), Positives = 259/375 (69%), Gaps = 10/375 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVFN+ D +G+K++DK I DYI + L D+ + PS R SV V + +H IE TG
Sbjct: 80 MDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHNVIELTG 139
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD TG A+ D RL I++
Sbjct: 140 TDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRLERIRDR 199
Query: 117 LFNVLRGYDDFRKAKTSLSPPGI-MNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L +LRG + R A ++S + ERRLHQ+M DD D+E++ + ++S RP V
Sbjct: 200 LSYLLRGGNLSRGAAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHR---HPPNQSQRPNV 256
Query: 176 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
TV N +KDY+V+T+R KDRPKLLFD VCTLTD+ YVVFH ++ +AYQEFY+RHV+
Sbjct: 257 TVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEFYVRHVN 316
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G P+ +EA+R RVIQCLEAAIERR SEG++LELCT D+VGLLS++TRIFRENSL++ RAE
Sbjct: 317 GSPMHTEADRLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTRAE 376
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 354
+ST G +TFYV D TG VD K IDSIR+ IG +QVK + KE+ T F
Sbjct: 377 VSTRGRMAVNTFYVRDSTGGTVDQKTIDSIRQAIGQ-NIQVKGQPEPSEPQKKESPTWFL 435
Query: 355 LGNFFKARTFQTFKL 369
N F+ R+ +F +
Sbjct: 436 FANLFRPRSLYSFGM 450
>gi|218193266|gb|EEC75693.1| hypothetical protein OsI_12504 [Oryza sativa Indica Group]
Length = 453
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 201/375 (53%), Positives = 258/375 (68%), Gaps = 10/375 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVI----DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVFN+ D +G+K++DK I DYI + L D+ + PS R SV V + +H IE TG
Sbjct: 80 MDVFNITDKEGQKLKDKATIARIEDYICKSLGADSRYIPSRRRSVDVAASSDHNVIELTG 139
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SEV AVLA L CNVV+AEIWTHN RAAAV+ VTD TG A+ D RL I++
Sbjct: 140 TDRPGLLSEVSAVLASLKCNVVSAEIWTHNTRAAAVMRVTDEGTGSAVTDADRLERIRDR 199
Query: 117 LFNVLRGYDDFRKAKTSLSPPGI-MNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L +LRG + R ++S + ERRLHQ+M DD D+E++ + ++S RP V
Sbjct: 200 LSYLLRGGNLSRGTAMAVSTGTCSTHTERRLHQMMLDDGDHEQLHR---HPPNQSQRPNV 256
Query: 176 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
TV N +KDY+V+T+R KDRPKLLFD VCTLTD+ YVVFH ++ +AYQEFY+RHV+
Sbjct: 257 TVSNWNDKDYSVVTIRCKDRPKLLFDTVCTLTDLHYVVFHANIDAKDNQAYQEFYVRHVN 316
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G P+ +EA+R RVIQCLEAAIERR SEG++LELCT D+VGLLS++TRIFRENSL++ RAE
Sbjct: 317 GSPMHTEADRLRVIQCLEAAIERRVSEGVKLELCTNDKVGLLSEVTRIFRENSLTVTRAE 376
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 354
+ST G +TFYV D TG VD K IDSIR+ IG +QVK + KE+ T F
Sbjct: 377 VSTRGRMAVNTFYVRDSTGGTVDQKTIDSIRQAIGQ-NIQVKGQPEPSEPQKKESPTWFL 435
Query: 355 LGNFFKARTFQTFKL 369
N F+ R+ +F +
Sbjct: 436 FANLFRPRSLYSFGM 450
>gi|449445562|ref|XP_004140541.1| PREDICTED: uncharacterized protein LOC101218687 [Cucumis sativus]
gi|449526489|ref|XP_004170246.1| PREDICTED: uncharacterized LOC101218687 [Cucumis sativus]
Length = 451
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 207/378 (54%), Positives = 264/378 (69%), Gaps = 7/378 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G K+ + +V + IQQ L SLR SVGV EEHT+IE TG DRP
Sbjct: 77 MDVFHVTDQRGNKLSENDVAERIQQSLGPRGRSFRSLRRSVGVQAAEEHTTIELTGRDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL CNVV AE+WTHN R A+VV++TD +TG+ I DP RL IK+LL V
Sbjct: 137 GLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGFPIDDPDRLGKIKQLLLFV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G D R A T++S G ++ERRLHQ+M+ DRDY++ + G ++ +P VTV +
Sbjct: 197 LKGDRDKRSANTAVSV-GSTHKERRLHQMMYADRDYDQDDLDCGSTSERR-KPLVTVESC 254
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+K YTV+ +RS DRPKLLFD VCTLTDMQYVV+H V EA QE+YIRH+DG PIS
Sbjct: 255 ADKGYTVVNLRSPDRPKLLFDTVCTLTDMQYVVYHATVIAEGPEATQEYYIRHMDGSPIS 314
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVI CLEAAI RR SEG+ LELC++DR GLLSD+TRIFREN LS+ RAE++T G
Sbjct: 315 SEAERQRVIHCLEAAIRRRTSEGIRLELCSDDRAGLLSDVTRIFRENGLSVTRAEVTTRG 374
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + FYVTD +GNPV ++I+++R++IG T L VK P E++ F LGN F
Sbjct: 375 TQAVNVFYVTDASGNPVKSEMIEAVRKEIGLTVLCVKDDEFCMKSPSPESSR-FSLGNLF 433
Query: 360 KART---FQTFKLIRSYS 374
++R+ LI+S S
Sbjct: 434 RSRSEKFLYNLGLIKSCS 451
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 17/171 (9%)
Query: 160 EKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
EK V R+ P+VTV N + T+I + S ++ L ++V L D+ ++ ++
Sbjct: 15 EKLVNRMNP----PRVTVDNDSSRKATLIKVDSANKRGSLLEVVQVLNDLNLIIRRAYIS 70
Query: 219 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCL-----------EAAIERRASEGLELEL 267
+ F++ G +S ER+ Q L + + A E +EL
Sbjct: 71 SDGEWFMDVFHVTDQRGNKLSENDVAERIQQSLGPRGRSFRSLRRSVGVQAAEEHTTIEL 130
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPVD 317
DR GLLS++ + + ++ AE+ T ++ Y+TD TG P+D
Sbjct: 131 TGRDRPGLLSEVFAVLADLKCNVVAAEVWTHNSRMASVVYITDEATGFPID 181
>gi|224030455|gb|ACN34303.1| unknown [Zea mays]
Length = 437
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/384 (52%), Positives = 261/384 (67%), Gaps = 19/384 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
M VFNV D DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG DRP
Sbjct: 63 MHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYA--LPEDQFTSIELTGADRP 120
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL +V
Sbjct: 121 GLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRDV 180
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS----SRPQVT 176
+RG + T +S ERRLH +M D E+A G ++ +RP+V
Sbjct: 181 MRGDGTCNRGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGRDESGGCGVARPKVV 234
Query: 177 VLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN----TGRTEAYQEFYIR 231
V++ E+ YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ + EAYQE+YIR
Sbjct: 235 VMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEYYIR 294
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
HVDG P+ S+AER R+++CLEAA+ERRAS GLELE+ TEDRVGLLS+ITR+FRENSLSI
Sbjct: 295 HVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSLSII 354
Query: 292 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP-KPPKETT 350
RA I+T GK +DTFYV+D GNPVD + +D++ Q+GH L+VKR AP K E
Sbjct: 355 RAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEAEGG 414
Query: 351 TGFFLGNFFKARTFQTFKLIRSYS 374
LG+ K+ +FQ +LIRSYS
Sbjct: 415 AVSVLGSLLKS-SFQGLRLIRSYS 437
>gi|414869679|tpg|DAA48236.1| TPA: ACR4 [Zea mays]
Length = 453
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 201/384 (52%), Positives = 261/384 (67%), Gaps = 19/384 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
M VFNV D DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG DRP
Sbjct: 79 MHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYA--LPEDQFTSIELTGADRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL +V
Sbjct: 137 GLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRDV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS----SRPQVT 176
+RG + T +S ERRLH +M D E+A G ++ +RP+V
Sbjct: 197 MRGDGTCNRGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGRDESGGCGVARPKVV 250
Query: 177 VLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN----TGRTEAYQEFYIR 231
V++ E+ YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ + EAYQE+YIR
Sbjct: 251 VMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEYYIR 310
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
HVDG P+ S+AER R+++CLEAA+ERRAS GLELE+ TEDRVGLLS+ITR+FRENSLSI
Sbjct: 311 HVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSLSII 370
Query: 292 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP-KPPKETT 350
RA I+T GK +DTFYV+D GNPVD + +D++ Q+GH L+VKR AP K E
Sbjct: 371 RAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEAEGG 430
Query: 351 TGFFLGNFFKARTFQTFKLIRSYS 374
LG+ K+ +FQ +LIRSYS
Sbjct: 431 AVSVLGSLLKS-SFQGLRLIRSYS 453
>gi|357502937|ref|XP_003621757.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
gi|355496772|gb|AES77975.1| hypothetical protein MTR_7g022470 [Medicago truncatula]
Length = 451
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 200/364 (54%), Positives = 257/364 (70%), Gaps = 4/364 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +GKKI ++V D IQQ L S+R SVGV EHT+IE TG DRP
Sbjct: 77 MDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIELTGRDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV A+LADL CNVV AE+WTHN R A+VV++TD +TG I +P RL+ IK LL V
Sbjct: 137 GLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLAKIKHLLLYV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
LRG D + A T++S +++RRLHQ+M+ DRDY+ + + ++ VTV +
Sbjct: 197 LRGDIDKKNANTAVSFCS-THKDRRLHQLMYADRDYDIYDGDYSCSTNDRNKLNVTVDDC 255
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
I+K YTV+ +R DRPKLLFD VCT+TDMQYVV+HG VN EAYQE+YIRHVDG PIS
Sbjct: 256 IDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEAYQEYYIRHVDGYPIS 315
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVI CLEAA+ RR SEG++LEL EDRVGLLSD+TRIFREN LS+ RAE++T G
Sbjct: 316 SEAERQRVIHCLEAAVRRRTSEGVKLELSGEDRVGLLSDVTRIFRENGLSVCRAEVTTRG 375
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + FYVTDV+GNPV + I+++R++IG T L+VK L K P + F L +
Sbjct: 376 SQAMNVFYVTDVSGNPVKSETIEAVRKEIGLTILRVKDDPCL--KSPTRESGKFSLRDLV 433
Query: 360 KART 363
++R+
Sbjct: 434 RSRS 437
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + T+I + S ++ L ++V LTDM +V +++ F++
Sbjct: 24 PRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYISSDGGWFMDVFHVT 83
Query: 232 HVDGLPISSEAERERVIQCLEAAIE-----------RRASEGLELELCTEDRVGLLSDIT 280
+G I E +R+ Q L + + A+E +EL DR GLLS++
Sbjct: 84 DQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIELTGRDRPGLLSEVF 143
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPVD 317
I + ++ AE+ T ++ Y+T D TG P+D
Sbjct: 144 AILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPID 181
>gi|226501350|ref|NP_001147811.1| ACR4 [Zea mays]
gi|195613876|gb|ACG28768.1| ACR4 [Zea mays]
Length = 453
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 199/384 (51%), Positives = 255/384 (66%), Gaps = 19/384 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
M VFNV D DG K+ ++EVID+IQ+ LE+D P +P ++ TSIE TG DRP
Sbjct: 79 MHVFNVTDQDGSKLHNREVIDHIQKCLESDGYLVPPANGYA--LPEDQFTSIELTGADRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVLA L CN+V AE+WTH+ R AAV+ VTD +TG A+ D RLS ++ELL +V
Sbjct: 137 GLLSEVCAVLATLSCNIVKAEVWTHDGRTAAVIQVTDEATGRAVHDAGRLSRVQELLRDV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD----RDYERVEKAVGRVEDKSSRPQVT 176
+RG T +S ERRLH +M D E +RP+V
Sbjct: 197 MRGDGTCNHGGTGISA------ERRLHTLMLDSVGGGGAEEAGGGGDESGGCGVARPKVV 250
Query: 177 VLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN----TGRTEAYQEFYIR 231
V++ E+ YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ + EAYQE+YIR
Sbjct: 251 VMDCAERRYTVVILRCRDRPKLLFDTLCALADLQYVVFHGTVDAEGASKDKEAYQEYYIR 310
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
HVDG P+ S+AER R+++CLEAA+ERRAS GLELE+ TEDRVGLLS+ITR+FRENSLSI
Sbjct: 311 HVDGHPVRSDAERARLVRCLEAAVERRASNGLELEVWTEDRVGLLSEITRVFRENSLSII 370
Query: 292 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP-KPPKETT 350
RA I+T GK +DTFYV+D GNPVD + +D++ Q+GH L+VKR AP K E
Sbjct: 371 RAAITTRDGKAEDTFYVSDAYGNPVDGRTMDAVGEQLGHAVLRVKRGGHDAPVKHEAEGG 430
Query: 351 TGFFLGNFFKARTFQTFKLIRSYS 374
LG+ K+ +FQ +LIRSYS
Sbjct: 431 AVSVLGSLLKS-SFQGLRLIRSYS 453
>gi|115458090|ref|NP_001052645.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|38347211|emb|CAD40537.2| OSJNBa0055C08.5 [Oryza sativa Japonica Group]
gi|113564216|dbj|BAF14559.1| Os04g0391500 [Oryza sativa Japonica Group]
gi|116309365|emb|CAH66445.1| OSIGBa0145N07.1 [Oryza sativa Indica Group]
gi|125548085|gb|EAY93907.1| hypothetical protein OsI_15680 [Oryza sativa Indica Group]
gi|125860408|dbj|BAF46927.1| ACT-domain repeat protein 6 [Oryza sativa Japonica Group]
gi|215695164|dbj|BAG90355.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 470
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 207/392 (52%), Positives = 262/392 (66%), Gaps = 20/392 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D + I YIQ LE D + P +R++VG++P EE+T IE TGTDRP
Sbjct: 81 MDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIELTGTDRP 140
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD-HSTGYAIKDPKRLSTIKELLFN 119
GL SEVCAVLA + C V +AE+WTHN R AAVVHVTD +G AI+D R++ I L N
Sbjct: 141 GLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADISTRLGN 200
Query: 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-----GRVEDKSSRPQ 174
+LRG R A + +P G+ ++ERRLHQ+MFDDRDY+ A GR ++
Sbjct: 201 LLRGQSGVRAAAAA-APGGLTHKERRLHQMMFDDRDYDGGGGAASSSPRGRSPTPATEVS 259
Query: 175 VTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHV 233
VT E+ YT + +R +DRPKLLFD VCT+TDM YV+ HG V++ R AYQE+YIRHV
Sbjct: 260 VTPC-AERGYTAVVVRCRDRPKLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHV 318
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG P+ SEAER+RV+QCLEAAIERR ++GL LE+ T DR GLLSD+TRIFREN L+I+RA
Sbjct: 319 DGDPVRSEAERQRVVQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRA 378
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET---- 349
EIS+ G+ DTFY++D G+PV+ K ID+IR QIG L+VK +
Sbjct: 379 EISSERGEAVDTFYLSDPQGHPVEAKTIDAIRAQIGEATLRVKHNPFADGDGAGGGGGGA 438
Query: 350 ------TTGFFLGNFFK-ARTFQTFKLIRSYS 374
+T F GN FK R FQ F LI+ YS
Sbjct: 439 TDDVAGSTAFLFGNLFKFYRPFQNFSLIKLYS 470
>gi|414587548|tpg|DAA38119.1| TPA: ACR4 [Zea mays]
Length = 451
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 198/379 (52%), Positives = 254/379 (67%), Gaps = 9/379 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MD FNV D DG K+ D I YIQ+ LE D + P ++VG++P+ ++TSIE TGTDRP
Sbjct: 77 MDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELTGTDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVLA + V +AE+WTHN R AAVVHVTD TG AI+D R++ I L N+
Sbjct: 137 GLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISARLGNL 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
LR + D R + S +++ERRLHQ+MFDDR E A D S R +V+V +
Sbjct: 197 LREHSDVRAGGGAGSLA--LHKERRLHQMMFDDRGVE--GHAAAAPPDGSLRTEVSVTHA 252
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVDGLPIS 239
E+ YT + +R +DRPKLLFD VCT+TDM+YVV HG V+ AYQE+YIRHVDG I
Sbjct: 253 ERGYTAVVVRCRDRPKLLFDTVCTITDMEYVVHHGTVSAEPGGGAYQEYYIRHVDGHAIR 312
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
E E++R+++CL AAIERR ++GLELE+ T DR GLLSDITRIFREN L+I+RAEIS+
Sbjct: 313 CEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENGLTIRRAEISSSD 372
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRS---TILAPKPPKETTTGFFLG 356
G+ DTFY++D G PV+ K I++IR QIG L+V+ + T TT F G
Sbjct: 373 GEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRNNPFGTGDDADMAGAGTTAFIFG 432
Query: 357 NFFK-ARTFQTFKLIRSYS 374
N FK R FQ+F LI+ YS
Sbjct: 433 NLFKFYRPFQSFSLIKLYS 451
>gi|226498746|ref|NP_001152134.1| ACR4 [Zea mays]
gi|195653115|gb|ACG46025.1| ACR4 [Zea mays]
Length = 451
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/379 (51%), Positives = 254/379 (67%), Gaps = 9/379 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MD FNV D DG K+ D I YIQ+ LE D + P ++VG++P+ ++TSIE TGTDRP
Sbjct: 77 MDAFNVTDRDGNKVLDASTISYIQKTLEVDDWYYPGAHNTVGIVPSGDYTSIELTGTDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVLA + V +AE+WTHN R AAVVHVTD TG AI+D R++ I L N+
Sbjct: 137 GLLSEVCAVLAAMGYAVQSAELWTHNTRVAAVVHVTDAETGGAIEDSARIADISARLGNL 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
LR + D R + S +++ERRLHQ+MFDDR E A D S R +V+V +
Sbjct: 197 LREHSDVRAGGGAGSLA--LHKERRLHQMMFDDRGVE--GHAATAPPDGSLRTEVSVTHA 252
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVDGLPIS 239
E+ YT + +R +DRPKLLFD VCT+TDM+YVV HG V+ AYQE+YIRHVDG I
Sbjct: 253 ERGYTAVVVRCRDRPKLLFDTVCTITDMKYVVHHGTVSAEPGGGAYQEYYIRHVDGHAIR 312
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
E E++R+++CL AAIERR ++GLELE+ T DR GLLSDITRIFREN L+I+RAEIS+
Sbjct: 313 CEDEQQRLVRCLAAAIERRTADGLELEVRTGDRAGLLSDITRIFRENGLTIRRAEISSSD 372
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILA---PKPPKETTTGFFLG 356
G+ DTFY++D G PV+ K I++IR QIG L+V+ ++ TT F G
Sbjct: 373 GEAVDTFYLSDPQGLPVETKTIEAIRAQIGEATLRVRNNSFGTGDHADVAGAGTTAFIFG 432
Query: 357 NFFK-ARTFQTFKLIRSYS 374
N FK R FQ+F LI+ YS
Sbjct: 433 NLFKFYRPFQSFSLIKLYS 451
>gi|125562330|gb|EAZ07778.1| hypothetical protein OsI_30031 [Oryza sativa Indica Group]
Length = 463
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/386 (52%), Positives = 266/386 (68%), Gaps = 14/386 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVG-VMPTEEHTSIEFTGTDR 59
MDVFNV D DG K+++KEV D I++ LE++ P S G P+EE T IE TGTDR
Sbjct: 80 MDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVPPASSPAGGAAPSEETTCIELTGTDR 139
Query: 60 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119
PGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS ++ELL N
Sbjct: 140 PGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQELLGN 199
Query: 120 VLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
V++G D RK T++S G N ERRLH++M DD D R + G V ++ +V
Sbjct: 200 VMQGDGDGGGDSRKGSTAVSL-GAANAERRLHRLMLDDGDAGRCGEERGGVAAAKAKAKV 258
Query: 176 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT---GRTEAYQEFYIR 231
V++ E+ YTV+ +R +DRP+LLFD +C LTD+ YVVFHG V+ EAYQE+Y+R
Sbjct: 259 VVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQEYYVR 318
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
HVDG P+ +AER R+++CLEAA+ERRAS+GLELE+ TEDR GLLS+ITR+FRENSLSI
Sbjct: 319 HVDGHPVRCDAERLRLVRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFRENSLSII 378
Query: 292 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPPKE 348
RA I+T G+ DTFYV+D GNPVD K ++++ Q+GH L+VK R+ I +
Sbjct: 379 RAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRAEDSGG 438
Query: 349 TTTGFFLGNFFKARTFQTFKLIRSYS 374
+GN K +FQ F+LIRSYS
Sbjct: 439 GGAASIIGNLLKG-SFQGFRLIRSYS 463
>gi|115477501|ref|NP_001062346.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|42761394|dbj|BAD11662.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|45735790|dbj|BAD13153.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113624315|dbj|BAF24260.1| Os08g0533600 [Oryza sativa Japonica Group]
gi|125860404|dbj|BAF46925.1| ACT-domain repeat protein 8 [Oryza sativa Japonica Group]
gi|215692655|dbj|BAG88075.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215741115|dbj|BAG97610.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 463
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 202/386 (52%), Positives = 267/386 (69%), Gaps = 14/386 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLET-DASFAPSLRSSVGVMPTEEHTSIEFTGTDR 59
MDVFNV D DG K+++KEV D I++ LE+ D P+ + G P+EE T IE TGTDR
Sbjct: 80 MDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIELTGTDR 139
Query: 60 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119
PGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS ++ELL N
Sbjct: 140 PGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQELLGN 199
Query: 120 VLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
V++G D RK T++S G N ERRLH++M DD D R + G V ++ +V
Sbjct: 200 VMQGDGDGGGDSRKGSTAVSL-GAANAERRLHRLMLDDGDAGRCGEERGGVAAAKAKAKV 258
Query: 176 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT---GRTEAYQEFYIR 231
V++ E+ YTV+ +R +DRP+LLFD +C LTD+ YVVFHG V+ EAYQE+Y+R
Sbjct: 259 VVMDCTERRYTVVILRCRDRPRLLFDTLCALTDLHYVVFHGTVDAEGGSAKEAYQEYYVR 318
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
HVDG P+ +AER R+++CLEAA+ERRAS+GLELE+ TEDR GLLS+ITR+FRENSLSI
Sbjct: 319 HVDGHPVRCDAERLRLVRCLEAAVERRASDGLELEVKTEDRAGLLSEITRVFRENSLSII 378
Query: 292 RAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPPKE 348
RA I+T G+ DTFYV+D GNPVD K ++++ Q+GH L+VK R+ I +
Sbjct: 379 RAVITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRAEDSGG 438
Query: 349 TTTGFFLGNFFKARTFQTFKLIRSYS 374
+GN K +FQ F+LIRSYS
Sbjct: 439 GGAAAIIGNLLKG-SFQGFRLIRSYS 463
>gi|242082075|ref|XP_002445806.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
gi|241942156|gb|EES15301.1| hypothetical protein SORBIDRAFT_07g026090 [Sorghum bicolor]
Length = 461
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 202/386 (52%), Positives = 259/386 (67%), Gaps = 15/386 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K++++EVID+IQ+ LE+D P V P ++ TSIE TG DRP
Sbjct: 79 MDVFNVTDQDGSKLQNREVIDHIQKCLESDGYLPPPANGGF-VPPEDQFTSIELTGADRP 137
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEVCAVLA L CN+V AE+WTH+ RAAAV+ +TD +TG AI D RLS +ELL N+
Sbjct: 138 GLLSEVCAVLAALSCNIVKAEVWTHDRRAAAVIQITDEATGLAIHDVGRLSRAQELLSNL 197
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDR------DYERVEKAVGRVEDKSSRPQ 174
++ + T +S G ERRLH++M DDR E+ G + + +
Sbjct: 198 MQSDGRCNRGATGVS-VGTARTERRLHKMMLDDRVGGGEEAVGGGEERGGCGKARHKAAK 256
Query: 175 VTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT--GRTEAYQEFYIR 231
V V++ E+ YTV+ +R +DRPKLLFD +C L D+QYVVFHG V+ EAYQE+YIR
Sbjct: 257 VVVMDCTERQYTVVILRCRDRPKLLFDTLCALNDLQYVVFHGTVDAEGASKEAYQEYYIR 316
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELEL--CTEDRVGLLSDITRIFRENSLS 289
HVDG P+ ++AER R+++CLEAA+ERRAS GLELEL TEDRVGLLS+ITR+FRENSLS
Sbjct: 317 HVDGHPVRADAERTRLVRCLEAAVERRASNGLELELEVRTEDRVGLLSEITRVFRENSLS 376
Query: 290 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP-KPPKE 348
I RA I+T GK +DTFYV+D GNPVD + ID++ Q+GH L+VKR A K E
Sbjct: 377 IIRAAITTKDGKAEDTFYVSDTYGNPVDGRTIDAVGEQLGHAVLRVKRRGHDASVKHEAE 436
Query: 349 TTTGFFLGNFFKARTFQTFKLIRSYS 374
LG+ K +FQ +LIRSYS
Sbjct: 437 GGAVSVLGSLLKG-SFQGLRLIRSYS 461
>gi|195970384|gb|ACG60673.1| hypothetical protein BoB028L01.070 [Brassica oleracea var.
alboglabra]
Length = 425
Score = 369 bits (948), Expect = e-99, Method: Compositional matrix adjust.
Identities = 201/382 (52%), Positives = 257/382 (67%), Gaps = 43/382 (11%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV DG K+ D+ V+DYIQ+ L +A F+ SLRS VGV+P+ + T IE TG DRP
Sbjct: 79 MDVFNVTHQDGNKVTDEVVLDYIQKSLGPEACFSTSLRS-VGVIPSTDSTVIELTGCDRP 137
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL L C+V+NAE+WTHN RAAAV+ VTD TG A+ DP+RLS IK LL NV
Sbjct: 138 GLLSELTAVLTHLKCSVLNAEVWTHNTRAAAVMEVTDDLTGSAVSDPERLSLIKSLLRNV 197
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKSSRPQVTV 177
L+G + ++AKT +S G ++ +RRLHQ+MF+DRDYE V+ V+D+ RP V V
Sbjct: 198 LKGSNTPKEAKTVVS-QGEVHTDRRLHQMMFEDRDYENGVMVDDDSSNVQDERQRPDVCV 256
Query: 178 LN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
N ++KDY+V+T+R KDRPKLLFD VCTLTDMQYVVFHG V+T TEA+QE+
Sbjct: 257 DNWLDKDYSVVTVRCKDRPKLLFDTVCTLTDMQYVVFHGSVDTEGTEAFQEY-------- 308
Query: 237 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
GL+LELCT DRVGLLS++TRIFRENSL++ RAE+
Sbjct: 309 -------------------------GLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVK 343
Query: 297 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPP-KETTTG 352
T GGK +TFYV+D +G +D K IDSIR+ IG T L+VK + KPP +E+ T
Sbjct: 344 TKGGKAVNTFYVSDASGYSIDAKTIDSIRQTIGKTLLKVKNKPKDQQQREKPPSQESPTR 403
Query: 353 FFLGNFFKARTFQTFKLIRSYS 374
F G FK+++F F L+RSYS
Sbjct: 404 FLFGGLFKSKSFVNFGLVRSYS 425
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 21/192 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K+ TVI + S + +L ++V LTD+ + +++ F +
Sbjct: 26 PRVVIDNDSCKEATVIRVDSANEYGILLEVVQILTDLDLTITKAYISSDGGWFMDVFNVT 85
Query: 232 HVDGLPISSEAERERVIQCL--EAAIERR--------ASEGLELELCTEDRVGLLSDITR 281
H DG ++ E + + + L EA +++ +EL DR GLLS++T
Sbjct: 86 HQDGNKVTDEVVLDYIQKSLGPEACFSTSLRSVGVIPSTDSTVIELTGCDRPGLLSELTA 145
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPV-DPKIIDSIRRQIGHTKLQVKRST 339
+ S+ AE+ T + VT D+TG+ V DP+ + I+ + R+
Sbjct: 146 VLTHLKCSVLNAEVWTHNTRAAAVMEVTDDLTGSAVSDPERLSLIKSLL--------RNV 197
Query: 340 ILAPKPPKETTT 351
+ PKE T
Sbjct: 198 LKGSNTPKEAKT 209
>gi|224053525|ref|XP_002297856.1| predicted protein [Populus trichocarpa]
gi|118487724|gb|ABK95686.1| unknown [Populus trichocarpa]
gi|222845114|gb|EEE82661.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 368 bits (944), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 199/378 (52%), Positives = 260/378 (68%), Gaps = 9/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF V D G K+ + +V + IQQ L SLR SVGV E+T+IE TG DRP
Sbjct: 76 MDVFYVTDQHGNKLSEDDVAERIQQSLGPRGRSFRSLRRSVGVQAAAENTTIELTGRDRP 135
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ A+L DL CNVV +E+WTHN R A+VV++TD +TG I DP RL+ IK+LL V
Sbjct: 136 GLLSEIFAILTDLKCNVVASEVWTHNSRMASVVYITDEATGLPIDDPDRLTKIKQLLLYV 195
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G D R A T++S ++ERRLHQ+M+ DRDY+ + G ++ +P VT+ N
Sbjct: 196 LKGDRDKRSANTAVSVDS-THKERRLHQMMYADRDYDMDDADFGSASER--KPFVTLENC 252
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
++K YT++ +R DRPKLLFD VCTLTDMQYVV+HG + EA QE++IRH+DG P+S
Sbjct: 253 VDKGYTIVNLRCPDRPKLLFDTVCTLTDMQYVVYHGTIIAEGPEACQEYFIRHMDGSPVS 312
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVI CLEAAI RR SEG+ LELC+EDRVGLLSD+TRIFREN LS+ RAE++T G
Sbjct: 313 SEAERQRVINCLEAAIRRRTSEGVRLELCSEDRVGLLSDVTRIFRENGLSVTRAEVTTRG 372
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + FYVTD +G PV + I+++R++IG T L V + PP+E F LGN F
Sbjct: 373 SQAVNVFYVTDSSGYPVKNETIEAVRKEIGLTILHVNDDA-HSKSPPQERGL-FSLGNIF 430
Query: 360 KART---FQTFKLIRSYS 374
++R+ LIRSYS
Sbjct: 431 RSRSEKFLYNLGLIRSYS 448
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + T+I + S ++ L ++V LTD+ ++ +++ FY+
Sbjct: 23 PRVTVDNASSRKATLIKVDSANKRGSLLEVVQVLTDLNLIIRRAYISSDGEWFMDVFYVT 82
Query: 232 HVDGLPISSEAERERVIQCL-----------EAAIERRASEGLELELCTEDRVGLLSDIT 280
G +S + ER+ Q L + + A+E +EL DR GLLS+I
Sbjct: 83 DQHGNKLSEDDVAERIQQSLGPRGRSFRSLRRSVGVQAAAENTTIELTGRDRPGLLSEIF 142
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPVD 317
I + ++ +E+ T ++ Y+TD TG P+D
Sbjct: 143 AILTDLKCNVVASEVWTHNSRMASVVYITDEATGLPID 180
>gi|225426651|ref|XP_002281251.1| PREDICTED: uncharacterized protein LOC100242743 [Vitis vinifera]
gi|147794108|emb|CAN62364.1| hypothetical protein VITISV_031924 [Vitis vinifera]
Length = 444
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 198/383 (51%), Positives = 259/383 (67%), Gaps = 23/383 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ VI+YI+Q L +RS+ T++E TGTDR
Sbjct: 76 MDVFHVTDLNGNKLTDESVINYIEQSL----GCIHHVRSN----SFNGLTALELTGTDRL 127
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL CNVV +++WTHN R A++++V D +G I+D +++ I+ L NV
Sbjct: 128 GLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEGRLRNV 187
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G +D R AKTS+S + + ERRLHQ+MF DRDYER + S P VTV N
Sbjct: 188 LKGDNDIRSAKTSVSL-AVTHTERRLHQMMFADRDYEREPI----IRSASESPAVTVQNW 242
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+E+ Y+V+ ++ KDR KLLFD+VCTLTDMQYVVFH +NT +AY EFYIRH DG PIS
Sbjct: 243 VERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTDGSPIS 302
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVIQCL+AAIERRASEG+ LELCTEDR GLL+D+TR FREN L++ RAEIST
Sbjct: 303 SEAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTTS 362
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK--ETTTG----- 352
+ FYVTD GNP DPKII+++R++IG + L+VK ++ + + E T G
Sbjct: 363 EIALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVKELPLINHQEAERDEPTVGVGGAV 422
Query: 353 -FFLGNFFKARTFQTFKLIRSYS 374
LG+ + R LIRS+S
Sbjct: 423 LLSLGSLVR-RNLYNLGLIRSHS 444
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V V N + T++ + S + +L + V LTD+ + +++ F++
Sbjct: 23 PRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKAYISSDGRWFMDVFHVT 82
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRAS--EGL-ELELCTEDRVGLLSDITRIFRENSL 288
++G ++ E+ + Q L R++ GL LEL DR+GLLS++ + +
Sbjct: 83 DLNGNKLTDESVINYIEQSLGCIHHVRSNSFNGLTALELTGTDRLGLLSEVFAVLADLEC 142
Query: 289 SIKRAEISTIGGKVKDTFYVTDV-TGNPV-DPKIIDSI 324
++ +++ T G++ YV D +GNP+ D + ID I
Sbjct: 143 NVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRI 180
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L + ++ + +LSIK+A IS+ G D F+VTD+ GN + D +I+ I + +G
Sbjct: 47 GILLEAVQVLTDLNLSIKKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLG 103
>gi|297742666|emb|CBI34815.3| unnamed protein product [Vitis vinifera]
Length = 440
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 198/383 (51%), Positives = 259/383 (67%), Gaps = 23/383 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ VI+YI+Q L +RS+ T++E TGTDR
Sbjct: 72 MDVFHVTDLNGNKLTDESVINYIEQSL----GCIHHVRSN----SFNGLTALELTGTDRL 123
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL CNVV +++WTHN R A++++V D +G I+D +++ I+ L NV
Sbjct: 124 GLLSEVFAVLADLECNVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRIEGRLRNV 183
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G +D R AKTS+S + + ERRLHQ+MF DRDYER + S P VTV N
Sbjct: 184 LKGDNDIRSAKTSVSL-AVTHTERRLHQMMFADRDYEREPI----IRSASESPAVTVQNW 238
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+E+ Y+V+ ++ KDR KLLFD+VCTLTDMQYVVFH +NT +AY EFYIRH DG PIS
Sbjct: 239 VERGYSVVNVQCKDRRKLLFDVVCTLTDMQYVVFHATINTAGDKAYLEFYIRHTDGSPIS 298
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVIQCL+AAIERRASEG+ LELCTEDR GLL+D+TR FREN L++ RAEIST
Sbjct: 299 SEAERQRVIQCLQAAIERRASEGVRLELCTEDRRGLLADVTRTFRENGLNVTRAEISTTS 358
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK--ETTTG----- 352
+ FYVTD GNP DPKII+++R++IG + L+VK ++ + + E T G
Sbjct: 359 EIALNVFYVTDAMGNPADPKIIEAVRQKIGLSNLKVKELPLINHQEAERDEPTVGVGGAV 418
Query: 353 -FFLGNFFKARTFQTFKLIRSYS 374
LG+ + R LIRS+S
Sbjct: 419 LLSLGSLVR-RNLYNLGLIRSHS 440
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V V N + T++ + S + +L + V LTD+ + +++ F++
Sbjct: 19 PRVVVDNAVCATTTLVKVDSARKHGILLEAVQVLTDLNLSIKKAYISSDGRWFMDVFHVT 78
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRAS--EGL-ELELCTEDRVGLLSDITRIFRENSL 288
++G ++ E+ + Q L R++ GL LEL DR+GLLS++ + +
Sbjct: 79 DLNGNKLTDESVINYIEQSLGCIHHVRSNSFNGLTALELTGTDRLGLLSEVFAVLADLEC 138
Query: 289 SIKRAEISTIGGKVKDTFYVTDV-TGNPV-DPKIIDSI 324
++ +++ T G++ YV D +GNP+ D + ID I
Sbjct: 139 NVVESKMWTHNGRIASLIYVKDCDSGNPIEDSQKIDRI 176
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L + ++ + +LSIK+A IS+ G D F+VTD+ GN + D +I+ I + +G
Sbjct: 43 GILLEAVQVLTDLNLSIKKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLG 99
>gi|224082380|ref|XP_002306671.1| predicted protein [Populus trichocarpa]
gi|222856120|gb|EEE93667.1| predicted protein [Populus trichocarpa]
Length = 445
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 193/367 (52%), Positives = 251/367 (68%), Gaps = 8/367 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS--VGVMPTEEHTSIEFTGTD 58
MDVF+V D GKKI D + IDYI++ L + S VGV +HT+IE TG D
Sbjct: 76 MDVFHVTDQQGKKIADLKTIDYIEKALGPKGQEEVTTWSGKPVGVHSVGDHTAIELTGRD 135
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 118
RPGL SE+ AVLA+LH NVV AE+WTHN R A VV+V D +T A+ DP RLS +++ L
Sbjct: 136 RPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVVYVNDDTTSRAVDDPTRLSAMEDQLK 195
Query: 119 NVLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 177
N+LRG DD K +TS S G + +RRLHQ++F DRDYE A + S +P++TV
Sbjct: 196 NILRGCDDDEKEGRTSFSM-GFTHVDRRLHQMLFADRDYEGGIVATEIHDPPSFKPKITV 254
Query: 178 LNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
+ E K Y+V+T+R KDR KL+FDIVCTLTDMQYVVFH +++ A QE+YIRH+DG
Sbjct: 255 EHCEEKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDAPHASQEYYIRHMDGC 314
Query: 237 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
+ +E E++RVI+CLEAAI RR SEGL LELC +DRVGLLS++TRI REN LS+ RA +
Sbjct: 315 VLDTEGEKDRVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRILRENGLSVSRAGVM 374
Query: 297 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKRSTILAPKPPKE--TTTGF 353
TIG + + FYV D +GNPVD KII+++RR+IGHT L VK+ + + +P T F
Sbjct: 375 TIGEQAMNVFYVRDASGNPVDMKIIEALRREIGHTMMLNVKKPPVSSREPEARGWAKTSF 434
Query: 354 FLGNFFK 360
F GN +
Sbjct: 435 FFGNLLE 441
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 167 EDKSSR---PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
E+ S+R P+V+V N D T+I + S ++P +L ++V LTD+ ++ +++
Sbjct: 14 ENLSTRINPPRVSVDNTSCSDSTLIKVDSMNKPGILLEVVQILTDLDLIITKAYISSDGG 73
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGL-----------------EL 265
F++ G I+ + I +E A+ + E + +
Sbjct: 74 WFMDVFHVTDQQGKKIAD----LKTIDYIEKALGPKGQEEVTTWSGKPVGVHSVGDHTAI 129
Query: 266 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV--DPKIIDS 323
EL DR GLLS+I+ + ++ AE+ T ++ YV D T + DP + +
Sbjct: 130 ELTGRDRPGLLSEISAVLANLHFNVVAAEVWTHNRRIACVVYVNDDTTSRAVDDPTRLSA 189
Query: 324 IRRQI 328
+ Q+
Sbjct: 190 MEDQL 194
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ G+L ++ +I + L I +A IS+ GG D F+VTD G + D K ID I + +G
Sbjct: 44 NKPGILLEVVQILTDLDLIITKAYISSDGGWFMDVFHVTDQQGKKIADLKTIDYIEKALG 103
>gi|224124920|ref|XP_002329846.1| predicted protein [Populus trichocarpa]
gi|222871083|gb|EEF08214.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 194/384 (50%), Positives = 257/384 (66%), Gaps = 24/384 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ VI+YI+Q L T P + + T++E TGTDR
Sbjct: 73 MDVFHVTDLNGNKLTDESVINYIEQSLGT---IHPGKTTGSNGL-----TALELTGTDRI 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL C+VV+A++WTHN R A++++V D ++G I+D + + I+ L NV
Sbjct: 125 GLLSEVFAVLADLQCSVVDAKVWTHNGRIASLMYVKDCNSGSPIEDTQHIDRIEARLRNV 184
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G +D R AKT +S + + ERRLHQ+MF DRDYER K + ++ P VTV N
Sbjct: 185 LKGDNDIRSAKTMVSM-AVTHTERRLHQVMFADRDYER--KPI--LQPSGDSPVVTVQNW 239
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+E+ Y+V+ ++ KDR KLLFD+VCTLTDM+Y+VFH +NT AY EFYIRH DG PIS
Sbjct: 240 VERGYSVVNVQCKDRTKLLFDVVCTLTDMEYIVFHATINTAGDRAYLEFYIRHTDGTPIS 299
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SE ER+RVIQCL+AA+ERRASEG+ LELCT DR GLL+D+TR FREN L++ RAEIST G
Sbjct: 300 SEPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGLNVTRAEISTAG 359
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR--STILAPKPPKETTTG----- 352
+ FYVTD GNP DPK+I+S+R++IG + L+VK I + +E T
Sbjct: 360 DMALNVFYVTDAVGNPADPKLIESVRQKIGVSNLKVKELPPLIYHQEAEREDQTAGVAGT 419
Query: 353 --FFLGNFFKARTFQTFKLIRSYS 374
LG+ K + LIRSYS
Sbjct: 420 VLLSLGSLVKKNLYH-LGLIRSYS 442
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + TV+ + S + ++L + V LTD+ + +++ F++
Sbjct: 20 PRVVIDNAVSSKATVVKVDSARKHRILLEAVQVLTDLNLSIKKAYISSDGRWFMDVFHVT 79
Query: 232 HVDGLPISSEAERERVIQCLEAAI------ERRASEGL-ELELCTEDRVGLLSDITRIFR 284
++G ++ E+ VI +E ++ + S GL LEL DR+GLLS++ +
Sbjct: 80 DLNGNKLTDES----VINYIEQSLGTIHPGKTTGSNGLTALELTGTDRIGLLSEVFAVLA 135
Query: 285 ENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPV-DPKIIDSIRRQI 328
+ S+ A++ T G++ YV D +G+P+ D + ID I ++
Sbjct: 136 DLQCSVVDAKVWTHNGRIASLMYVKDCNSGSPIEDTQHIDRIEARL 181
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 275 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
+L + ++ + +LSIK+A IS+ G D F+VTD+ GN + D +I+ I + +G
Sbjct: 45 ILLEAVQVLTDLNLSIKKAYISSDGRWFMDVFHVTDLNGNKLTDESVINYIEQSLG 100
>gi|302818108|ref|XP_002990728.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
gi|300141466|gb|EFJ08177.1| hypothetical protein SELMODRAFT_132226 [Selaginella moellendorffii]
Length = 466
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 190/393 (48%), Positives = 252/393 (64%), Gaps = 21/393 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVF+V D G K+RD+ +IDYIQQ L T + SL +VG + HT+IE +G
Sbjct: 76 MDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGHTAIELSG 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ VL + CNVV AE+WTHN R A VV+VTD +TG IKDP++L+ +KE
Sbjct: 136 RDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEKLARMKEQ 195
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE--RVEKAVGRVEDKSSRPQ 174
L VLRG D+ R A T S G+ + ERRLHQ+M DRDY+ ++ V D RP
Sbjct: 196 LSQVLRGDDENRLATTDFSS-GLTHTERRLHQMMLADRDYDVPSSTSSINAVLDARIRPV 254
Query: 175 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
+++ N +EK Y+V++++ KDRPKLLFD VCTLTDM+YVVFH AYQE+YIRH+
Sbjct: 255 ISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQEYYIRHM 314
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG + +AE+ERV++CLEAAIERR SEGL LELCT DRVGLLSD+TR+FRE LS+ RA
Sbjct: 315 DGCTLDLDAEQERVVKCLEAAIERRVSEGLRLELCTRDRVGLLSDVTRVFREKGLSVTRA 374
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRST------------IL 341
++ST G + + FYVTD +G V K+++++R +IG L+VK
Sbjct: 375 DVSTRGDRAVNVFYVTDTSGKAVSMKVVEALRLEIGQAILEVKEEVKEGRGEGAAEVAAE 434
Query: 342 APKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 374
+ + F GN + R F L++SYS
Sbjct: 435 VAAAGGMSRSRFSFGNLSE-RFFHGLGLVKSYS 466
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ ++ + L+I +A IS+ GG D F+VTD G+ + D IID I++
Sbjct: 42 SANKHGILLEVVQVLTDLDLTISKAYISSDGGWFMDVFHVTDKLGHKLRDQGIIDYIQQS 101
Query: 328 IGH---TKLQVKRSTILAPKPPKETTTG 352
+G T QVK S LAP +++ G
Sbjct: 102 LGDAQATTSQVKTS--LAPTVGTQSSGG 127
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P V + N D T++ + S ++ +L ++V LTD+ + +++ F++
Sbjct: 23 PSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYISSDGGWFMDVFHVT 82
Query: 232 HVDGLPI--------------SSEAERERVIQCLEAAIERRASEG-LELELCTEDRVGLL 276
G + ++A +V L + ++S G +EL DR GLL
Sbjct: 83 DKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGHTAIELSGRDRPGLL 142
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRRQIGH 330
S+I+ + + ++ AE+ T +V YVTD TG P+ DP+ + ++ Q+
Sbjct: 143 SEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEKLARMKEQLSQ 198
>gi|302810022|ref|XP_002986703.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
gi|300145591|gb|EFJ12266.1| hypothetical protein SELMODRAFT_124581 [Selaginella moellendorffii]
Length = 466
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 190/393 (48%), Positives = 252/393 (64%), Gaps = 21/393 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVF+V D G K+RD+ +IDYIQQ L T + SL +VG + HT+IE +G
Sbjct: 76 MDVFHVTDKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGHTAIELSG 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ VL + CNVV AE+WTHN R A VV+VTD +TG IKDP++L+ +KE
Sbjct: 136 RDRPGLLSEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEKLARMKER 195
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE--RVEKAVGRVEDKSSRPQ 174
L VLRG D+ R A T S G+ + ERRLHQ+M DRDY+ ++ V D RP
Sbjct: 196 LSQVLRGDDENRLATTDFSS-GLTHTERRLHQMMLADRDYDVPSSTSSINAVLDARIRPV 254
Query: 175 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
+++ N +EK Y+V++++ KDRPKLLFD VCTLTDM+YVVFH AYQE+YIRH+
Sbjct: 255 ISLRNCLEKGYSVVSVQCKDRPKLLFDTVCTLTDMEYVVFHASARADGPYAYQEYYIRHM 314
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG + +AE+ERV++CLEAAIERR SEGL LELCT DRVGLLSD+TR+FRE LS+ RA
Sbjct: 315 DGCTLDLDAEQERVVKCLEAAIERRVSEGLRLELCTRDRVGLLSDVTRVFREKGLSVTRA 374
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRST------------IL 341
++ST G + + FYVTD +G V K+++++R +IG L+VK
Sbjct: 375 DVSTRGDRAVNVFYVTDTSGKAVSMKVVEALRLEIGQAILEVKEEVKEGRGEGAAEVAAE 434
Query: 342 APKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 374
+ + F GN + R F L++SYS
Sbjct: 435 VAAAGGMSRSRFSFGNLSE-RFFHGLGLVKSYS 466
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ ++ + L+I +A IS+ GG D F+VTD G+ + D IID I++
Sbjct: 42 SANKHGILLEVVQVLTDLDLTISKAYISSDGGWFMDVFHVTDKLGHKLRDQGIIDYIQQS 101
Query: 328 IGH---TKLQVKRSTILAPKPPKETTTG 352
+G T QVK S LAP +++ G
Sbjct: 102 LGDAQATTSQVKTS--LAPTVGTQSSGG 127
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 18/176 (10%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P V + N D T++ + S ++ +L ++V LTD+ + +++ F++
Sbjct: 23 PSVVIDNSSCDDATLVKVDSANKHGILLEVVQVLTDLDLTISKAYISSDGGWFMDVFHVT 82
Query: 232 HVDGLPI--------------SSEAERERVIQCLEAAIERRASEG-LELELCTEDRVGLL 276
G + ++A +V L + ++S G +EL DR GLL
Sbjct: 83 DKLGHKLRDQGIIDYIQQSLGDAQATTSQVKTSLAPTVGTQSSGGHTAIELSGRDRPGLL 142
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRRQIGH 330
S+I+ + + ++ AE+ T +V YVTD TG P+ DP+ + ++ ++
Sbjct: 143 SEISGVLTGMTCNVVAAEVWTHNKRVACVVYVTDEATGCPIKDPEKLARMKERLSQ 198
>gi|224066763|ref|XP_002302203.1| predicted protein [Populus trichocarpa]
gi|222843929|gb|EEE81476.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 357 bits (916), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 185/366 (50%), Positives = 245/366 (66%), Gaps = 7/366 (1%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSSVGVMPTEEHTSIEFTGTD 58
MDVF+V D GKKI D + IDYI++ L ++ VGV HT+IE G D
Sbjct: 76 MDVFHVTDQQGKKITDIKTIDYIEKALGPKSQEEVTTWADKRVGVHSVGGHTAIELIGKD 135
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 118
RPGL SE+ AVLA+LH NVV AE+WTHN R A VV+V D +T A+ DP RLS +++ L
Sbjct: 136 RPGLLSEISAVLANLHFNVVAAEVWTHNSRIACVVYVNDDTTSRAVADPTRLSIMEDQLK 195
Query: 119 NVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL 178
N+LRG ++ +TS S G + +RRLHQ++F DRDYE A S +P++TV
Sbjct: 196 NILRGCENDEAGRTSFSM-GFTHVDRRLHQMLFADRDYEGGIVATEVDYPPSIKPKITVE 254
Query: 179 NIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 237
E K Y+V+T+R KDR KL+FDIVCTLTDMQYVVFH +++ A QE+YIRH+DG
Sbjct: 255 RCEDKGYSVVTVRCKDRAKLMFDIVCTLTDMQYVVFHATISSDGPHASQEYYIRHMDGCV 314
Query: 238 ISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297
+ +E E+ERVI+CLEAAI RR SEGL LELC +DRVGLLS++TRI REN L++ RA + T
Sbjct: 315 LDTEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRILRENGLAVSRAGVMT 374
Query: 298 IGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE---TTTGFF 354
IG + + FYV D +GNPVD KII+++R++IGHT + + T + + P+ T FF
Sbjct: 375 IGEQATNVFYVRDASGNPVDTKIIEALRKEIGHTMMLNVKKTPASSREPEARGWAKTSFF 434
Query: 355 LGNFFK 360
GN +
Sbjct: 435 FGNLLE 440
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 76/167 (45%), Gaps = 25/167 (14%)
Query: 167 EDKSSR---PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
E+ S+R P+V+V N D T++ + S ++P +L ++V LTD+ ++ +++
Sbjct: 14 ENLSTRINPPRVSVDNTSCNDSTLVKVDSMNKPGILLEVVQVLTDLDLIITKAYISSDGG 73
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGL-----------------EL 265
F++ G I+ + I +E A+ ++ E + +
Sbjct: 74 WFMDVFHVTDQQGKKITD----IKTIDYIEKALGPKSQEEVTTWADKRVGVHSVGGHTAI 129
Query: 266 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT 312
EL +DR GLLS+I+ + ++ AE+ T ++ YV D T
Sbjct: 130 ELIGKDRPGLLSEISAVLANLHFNVVAAEVWTHNSRIACVVYVNDDT 176
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 14/82 (17%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ G+L ++ ++ + L I +A IS+ GG D F+VTD G + D K ID I + +G
Sbjct: 44 NKPGILLEVVQVLTDLDLIITKAYISSDGGWFMDVFHVTDQQGKKITDIKTIDYIEKALG 103
Query: 330 HTKLQVKRSTILAPKPPKETTT 351
PK +E TT
Sbjct: 104 -------------PKSQEEVTT 112
>gi|356497179|ref|XP_003517440.1| PREDICTED: uncharacterized protein LOC100780903 [Glycine max]
Length = 441
Score = 357 bits (915), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 184/337 (54%), Positives = 239/337 (70%), Gaps = 14/337 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G KI D+ V+ YI+Q L +L + + T++E TGTDR
Sbjct: 73 MDVFHVTDQNGNKIIDESVLKYIEQSLGNIHYGRTNLSNGL--------TALELTGTDRV 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL C+VV +++WTHN R A++++V D S+G AI+D ++++ I+ L NV
Sbjct: 125 GLLSEVFAVLADLQCDVVESKVWTHNGRIASLIYVKDSSSGSAIEDSQKINKIELRLRNV 184
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G +D R AK S S +M+ ERRLHQ+MF DRDYER ++ S VTV N
Sbjct: 185 LKGDNDIRSAKISFSMA-VMHTERRLHQLMFVDRDYERAPI----LKLTSDNASVTVQNW 239
Query: 181 E-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
E + Y+V+ ++ KDR KLLFDIVC LTDM+YVVFH +NT AY EFYIRH DG PIS
Sbjct: 240 EGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTDGDRAYLEFYIRHKDGTPIS 299
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SE ER+RVIQCL+AA+ERRASEG+ LELCTEDR GLL+++ R FREN L++ RAEISTIG
Sbjct: 300 SEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVVRTFRENGLNVTRAEISTIG 359
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 336
K+ FYVTD GNP D KII+S+R++IG + L+VK
Sbjct: 360 NMAKNIFYVTDAIGNPADSKIIESVRQKIGLSNLEVK 396
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDSIRRQIGH 330
R G+L D + + +LSIK+A IS G D F+VTD GN +D ++ I + +G+
Sbjct: 42 RHGILLDAVEVLADLNLSIKKAYISADGKWFMDVFHVTDQNGNKIIDESVLKYIEQSLGN 101
>gi|255537131|ref|XP_002509632.1| amino acid binding protein, putative [Ricinus communis]
gi|223549531|gb|EEF51019.1| amino acid binding protein, putative [Ricinus communis]
Length = 442
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 195/389 (50%), Positives = 253/389 (65%), Gaps = 34/389 (8%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEH-----TSIEFT 55
MDVF+V D +G K+ D+ VI+YI+Q L T + H T++E T
Sbjct: 73 MDVFHVTDINGNKLTDESVINYIEQSLGT-------------IHYGRTHDFNGLTALELT 119
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
GTDR GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D + + I+
Sbjct: 120 GTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDSQHIDRIEA 179
Query: 116 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L NVL+G +D R AKTS+S + + ERRLHQ+MF DRDYER K + R S P V
Sbjct: 180 RLRNVLKGDNDIRSAKTSVSM-AVTHTERRLHQMMFADRDYER--KPILRFSADS--PVV 234
Query: 176 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
TV N +E+ Y+V+ ++ KDR KLLFD+VCTLTDM+YVVFH +NT +AY EFYI+H D
Sbjct: 235 TVQNWVERGYSVVNVQCKDRMKLLFDVVCTLTDMEYVVFHATINTAGDKAYLEFYIKHTD 294
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G PISSE ER+RVIQCL+AA+ERRASEG+ LELCT DR GLL+D+TR FREN L++ RAE
Sbjct: 295 GTPISSEPERQRVIQCLQAAVERRASEGVRLELCTPDRQGLLADVTRTFRENGLNVTRAE 354
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE------ 348
IST + FYVTD GNP D KII+S+R++IG + L+VK L E
Sbjct: 355 ISTSTKTATNVFYVTDAIGNPADSKIIESVRQRIGLSNLKVKELPPLMYHQEAEREEQGV 414
Query: 349 ---TTTGFFLGNFFKARTFQTFKLIRSYS 374
T LG+ + + LIRSYS
Sbjct: 415 GVAGTVLLSLGSLVR-KNLYNLGLIRSYS 442
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 244
TV+ + S + +L + V LTD+ + +++ F++ ++G ++ E+
Sbjct: 33 TVVKVDSARKHGILLEAVQVLTDLNLSIKKAYISSDGRWFMDVFHVTDINGNKLTDESVI 92
Query: 245 ERVIQCLEAAIERRASE--GL-ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGK 301
+ Q L R + GL LEL DRVGLLS++ + + + A++ T G+
Sbjct: 93 NYIEQSLGTIHYGRTHDFNGLTALELTGTDRVGLLSEVFAVLADLQCDVVEAKVWTHNGR 152
Query: 302 VKDTFYVTDV-TGNPV-DPKIIDSIRRQI 328
+ YV D +G+P+ D + ID I ++
Sbjct: 153 IASLIYVKDCNSGSPIEDSQHIDRIEARL 181
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L + ++ + +LSIK+A IS+ G D F+VTD+ GN + D +I+ I + +G
Sbjct: 44 GILLEAVQVLTDLNLSIKKAYISSDGRWFMDVFHVTDINGNKLTDESVINYIEQSLG 100
>gi|356540171|ref|XP_003538563.1| PREDICTED: Protein-PII uridylyltransferase [Glycine max]
Length = 441
Score = 353 bits (906), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 184/337 (54%), Positives = 243/337 (72%), Gaps = 14/337 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G KI D+ V+ YI+Q L + + + RS+ G+ T++E TG+DR
Sbjct: 73 MDVFHVTDQNGNKIMDESVLKYIEQSL-GNIHYGRTNRSN-GL------TALELTGSDRV 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL C+V +A++WTHN R A++++V D S+G AI+D ++++ I+ L NV
Sbjct: 125 GLLSEVFAVLADLQCDVADAKVWTHNGRIASLIYVKDCSSGSAIEDSQKINKIELRLRNV 184
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G +D R AK S+S +M+ ERRLHQ+MF DRDYER ++ S P VTV N
Sbjct: 185 LKGDNDIRSAKMSVSM-AVMHTERRLHQLMFVDRDYERTPI----LKLTSDNPLVTVQNW 239
Query: 181 E-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
E + Y+V+ ++ KDR KLLFDIVC LTDM+YVVFH +NT AY EFYIRH DG PIS
Sbjct: 240 EGRGYSVVNVQCKDRTKLLFDIVCNLTDMEYVVFHATINTSGDRAYLEFYIRHKDGTPIS 299
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SE ER+RVIQCL+AA+ERRASEG+ LELCTEDR GLL+++ R FREN L++ RAEISTIG
Sbjct: 300 SEPERQRVIQCLKAAVERRASEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIG 359
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 336
+ FYVTD G P D KII+S+R++IG + L+VK
Sbjct: 360 NMATNIFYVTDAIGIPADSKIIESVRQKIGLSNLEVK 396
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 4/148 (2%)
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
+ S P+V + N + T++ + S R +L D V LTD+ + ++
Sbjct: 16 RMSTPRVVIDNSVCSSATLVKVDSARRHGILLDAVQVLTDLNLSIKKAYISADGKWFMDV 75
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRA--SEGL-ELELCTEDRVGLLSDITRIFR 284
F++ +G I E+ + + Q L R S GL LEL DRVGLLS++ +
Sbjct: 76 FHVTDQNGNKIMDESVLKYIEQSLGNIHYGRTNRSNGLTALELTGSDRVGLLSEVFAVLA 135
Query: 285 ENSLSIKRAEISTIGGKVKDTFYVTDVT 312
+ + A++ T G++ YV D +
Sbjct: 136 DLQCDVADAKVWTHNGRIASLIYVKDCS 163
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIGH 330
R G+L D ++ + +LSIK+A IS G D F+VTD GN + D ++ I + +G+
Sbjct: 42 RHGILLDAVQVLTDLNLSIKKAYISADGKWFMDVFHVTDQNGNKIMDESVLKYIEQSLGN 101
>gi|359492290|ref|XP_003634395.1| PREDICTED: uncharacterized protein LOC100250578 isoform 2 [Vitis
vinifera]
Length = 465
Score = 353 bits (905), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 185/369 (50%), Positives = 249/369 (67%), Gaps = 10/369 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTG 56
MDVF+V D G KI D ++IDYI++ L +++ VGV +HT+IE G
Sbjct: 94 MDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDHTAIELIG 153
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP RLS ++E
Sbjct: 154 KDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTRLSVMEEQ 213
Query: 117 LFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE + S +P++
Sbjct: 214 LKNVLRGCEDDDKVARTSFSM-GFTHVDRRLHQMLFADRDYEGGGTTIEADYPPSFKPKI 272
Query: 176 TVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
T+ E K Y+ +++ KDRPKL+FDIVCTLTDMQYVVFH +++ A QE++IRH+D
Sbjct: 273 TIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIRHMD 332
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G + +E E+ERVI+CLEAAI RR SEGL LELC +DRVGLLS++TR+ RE+ LS+ RA
Sbjct: 333 GCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREHGLSVTRAG 392
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKR--STILAPKPPKETTT 351
+ST+G + + FYV D +G PVD K I+++R++IGHT L VK+ S+ P+ T
Sbjct: 393 VSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKEPSSAKTPEASGWAKT 452
Query: 352 GFFLGNFFK 360
FF G+ F+
Sbjct: 453 SFFFGSLFE 461
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ G+L ++ +I + L I +A IS+ GG D F+VTD GN + D KIID I + +G
Sbjct: 62 NKPGILLEVVQILTDIDLLITKAYISSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALG 121
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V+V N+ D T+I + S ++P +L ++V LTD+ ++ +++ F++
Sbjct: 41 PRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYISSDGGWFMDVFHVT 100
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRAS--EGLE-----------------LELCTEDR 272
G I+ ++I +E A+ + +G++ +EL +DR
Sbjct: 101 DQQGNKITD----GKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDHTAIELIGKDR 156
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
GLLS+I+ + + ++ AE+ T ++ YV D
Sbjct: 157 PGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVND 194
>gi|302142726|emb|CBI19929.3| unnamed protein product [Vitis vinifera]
Length = 466
Score = 353 bits (905), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 185/369 (50%), Positives = 249/369 (67%), Gaps = 10/369 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTG 56
MDVF+V D G KI D ++IDYI++ L +++ VGV +HT+IE G
Sbjct: 95 MDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDHTAIELIG 154
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP RLS ++E
Sbjct: 155 KDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTRLSVMEEQ 214
Query: 117 LFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE + S +P++
Sbjct: 215 LKNVLRGCEDDDKVARTSFSM-GFTHVDRRLHQMLFADRDYEGGGTTIEADYPPSFKPKI 273
Query: 176 TVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
T+ E K Y+ +++ KDRPKL+FDIVCTLTDMQYVVFH +++ A QE++IRH+D
Sbjct: 274 TIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIRHMD 333
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G + +E E+ERVI+CLEAAI RR SEGL LELC +DRVGLLS++TR+ RE+ LS+ RA
Sbjct: 334 GCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREHGLSVTRAG 393
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKR--STILAPKPPKETTT 351
+ST+G + + FYV D +G PVD K I+++R++IGHT L VK+ S+ P+ T
Sbjct: 394 VSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKEPSSAKTPEASGWAKT 453
Query: 352 GFFLGNFFK 360
FF G+ F+
Sbjct: 454 SFFFGSLFE 462
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ G+L ++ +I + L I +A IS+ GG D F+VTD GN + D KIID I + +G
Sbjct: 63 NKPGILLEVVQILTDIDLLITKAYISSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALG 122
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V+V N+ D T+I + S ++P +L ++V LTD+ ++ +++ F++
Sbjct: 42 PRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYISSDGGWFMDVFHVT 101
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRAS--EGLE-----------------LELCTEDR 272
G I+ ++I +E A+ + +G++ +EL +DR
Sbjct: 102 DQQGNKITD----GKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDHTAIELIGKDR 157
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
GLLS+I+ + + ++ AE+ T ++ YV D
Sbjct: 158 PGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVND 195
>gi|225457853|ref|XP_002268570.1| PREDICTED: uncharacterized protein LOC100250578 isoform 1 [Vitis
vinifera]
gi|147789965|emb|CAN73861.1| hypothetical protein VITISV_007291 [Vitis vinifera]
Length = 447
Score = 353 bits (905), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/369 (50%), Positives = 249/369 (67%), Gaps = 10/369 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTG 56
MDVF+V D G KI D ++IDYI++ L +++ VGV +HT+IE G
Sbjct: 76 MDVFHVTDQQGNKITDGKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDHTAIELIG 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVLADLH NVV AE+WTHN R A VV+V D +T A+ DP RLS ++E
Sbjct: 136 KDRPGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVNDDATCRAVDDPTRLSVMEEQ 195
Query: 117 LFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L NVLRG DD + A+TS S G + +RRLHQ++F DRDYE + S +P++
Sbjct: 196 LKNVLRGCEDDDKVARTSFSM-GFTHVDRRLHQMLFADRDYEGGGTTIEADYPPSFKPKI 254
Query: 176 TVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
T+ E K Y+ +++ KDRPKL+FDIVCTLTDMQYVVFH +++ A QE++IRH+D
Sbjct: 255 TIDRCEDKGYSAVSVMCKDRPKLMFDIVCTLTDMQYVVFHASISSDGPYASQEYFIRHMD 314
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G + +E E+ERVI+CLEAAI RR SEGL LELC +DRVGLLS++TR+ RE+ LS+ RA
Sbjct: 315 GCTLDNEGEKERVIKCLEAAIRRRVSEGLSLELCAKDRVGLLSEVTRVLREHGLSVTRAG 374
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKR--STILAPKPPKETTT 351
+ST+G + + FYV D +G PVD K I+++R++IGHT L VK+ S+ P+ T
Sbjct: 375 VSTVGEQAMNVFYVRDASGKPVDMKTIEALRKEIGHTMMLNVKKEPSSAKTPEASGWAKT 434
Query: 352 GFFLGNFFK 360
FF G+ F+
Sbjct: 435 SFFFGSLFE 443
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ G+L ++ +I + L I +A IS+ GG D F+VTD GN + D KIID I + +G
Sbjct: 44 NKPGILLEVVQILTDIDLLITKAYISSDGGWFMDVFHVTDQQGNKITDGKIIDYIEKALG 103
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 74/158 (46%), Gaps = 24/158 (15%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V+V N+ D T+I + S ++P +L ++V LTD+ ++ +++ F++
Sbjct: 23 PRVSVDNLSCSDCTLIKVDSMNKPGILLEVVQILTDIDLLITKAYISSDGGWFMDVFHVT 82
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRAS--EGLE-----------------LELCTEDR 272
G I+ ++I +E A+ + +G++ +EL +DR
Sbjct: 83 DQQGNKITD----GKIIDYIEKALGPKGDTIDGVKTWPGKRVGVHSVGDHTAIELIGKDR 138
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
GLLS+I+ + + ++ AE+ T ++ YV D
Sbjct: 139 PGLLSEISAVLADLHFNVVGAEVWTHNRRIACVVYVND 176
>gi|224075527|ref|XP_002304667.1| predicted protein [Populus trichocarpa]
gi|222842099|gb|EEE79646.1| predicted protein [Populus trichocarpa]
Length = 448
Score = 351 bits (900), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 193/378 (51%), Positives = 257/378 (67%), Gaps = 9/378 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G K+ + +V + IQQ L SLR SV V EHT+IE TG DRP
Sbjct: 76 MDVFHVTDQHGNKLSEDDVAERIQQSLGPRGPSFRSLRRSVDVQGAAEHTTIELTGRDRP 135
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVLA L CNVV +EIWTHN R A+VV++TD +TG I DP RL+ IK+LL +
Sbjct: 136 GLLSEIFAVLAGLKCNVVASEIWTHNSRMASVVYITDEATGLPIDDPDRLTKIKQLLLCI 195
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L G D R A T++S G ++ERRLHQ+M+ DRDY+ + +++ VTV N
Sbjct: 196 LIGDRDKRSANTAVSV-GSTHKERRLHQMMYADRDYDVDDADCSSASERNRF--VTVENC 252
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
++K YTV+ +R DRPKL+FD VCTLTDMQYVV+H ++ EA QE++IRH+DG PI+
Sbjct: 253 VDKGYTVVNLRCPDRPKLIFDTVCTLTDMQYVVYHAIIIAEGPEACQEYFIRHMDGSPIN 312
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+R+I CLEAAI RR SEG+ LELC+EDRVGLLSD+TRIFREN LS+ RAE++T G
Sbjct: 313 SEAERQRLINCLEAAIRRRTSEGVRLELCSEDRVGLLSDVTRIFRENGLSVTRAEVTTRG 372
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFF 359
+ + F+VTD +G+PV + I+++R++IG T L V + PP+E LGN F
Sbjct: 373 SQAVNVFFVTDSSGHPVKSETIEAVRKEIGLTILNVNDDA-YSKSPPQERGL-LSLGNIF 430
Query: 360 KART---FQTFKLIRSYS 374
++++ LI+S S
Sbjct: 431 RSKSEKFLYHLGLIKSNS 448
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + T+I + S ++ L ++V LTD+ ++ +++ F++
Sbjct: 23 PRVTVDNASSRTATLIEVDSANKRGSLLEVVQVLTDLNLLIRRAYISSDGEWFMDVFHVT 82
Query: 232 HVDGLPISSEAERERVIQCLEA------AIERR-----ASEGLELELCTEDRVGLLSDIT 280
G +S + ER+ Q L ++ R A+E +EL DR GLLS+I
Sbjct: 83 DQHGNKLSEDDVAERIQQSLGPRGPSFRSLRRSVDVQGAAEHTTIELTGRDRPGLLSEIF 142
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPVD 317
+ ++ +EI T ++ Y+TD TG P+D
Sbjct: 143 AVLAGLKCNVVASEIWTHNSRMASVVYITDEATGLPID 180
>gi|255558468|ref|XP_002520259.1| amino acid binding protein, putative [Ricinus communis]
gi|223540478|gb|EEF42045.1| amino acid binding protein, putative [Ricinus communis]
Length = 447
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 184/369 (49%), Positives = 247/369 (66%), Gaps = 10/369 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTG 56
MD+F+V D GKKI D + IDYI++ L L++ VGV ++T+IE G
Sbjct: 76 MDIFHVTDQQGKKIIDSKTIDYIEKALGPKEYNKDELKTWPGKRVGVHSVGDYTAIELIG 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVLA+LH NV AE+WTHN R A VV+V D++T + DP RLS ++E
Sbjct: 136 RDRPGLLSEITAVLANLHFNVAAAEVWTHNRRIACVVYVNDYTTCRPVDDPTRLSVMEEQ 195
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS-RPQV 175
L N+LRG +D KA + G + +RRLHQ+ F DRDYE VE SS +P++
Sbjct: 196 LKNILRGCEDDEKASRTSFSMGFTHIDRRLHQMFFADRDYEG-GGVTNEVEYPSSFKPKI 254
Query: 176 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
TV EK Y+V+++ KDR KLLFDIVCTLTDMQYVVFH +++ A QE+YIRH+D
Sbjct: 255 TVERCGEKGYSVVSVCCKDRAKLLFDIVCTLTDMQYVVFHATISSDGPYASQEYYIRHMD 314
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G + +E E+ERVI+CLEAAI RR EGL LELC +DRVGLLS++TR+ REN LS+ RA
Sbjct: 315 GCTLDTEGEKERVIKCLEAAIRRRVCEGLSLELCAKDRVGLLSEVTRVLRENGLSVTRAG 374
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKRSTILAPKPPKE--TTT 351
++T+G + + FYV D +GNPVD K I+++R++IGHT L VK++ + A +P + T
Sbjct: 375 VTTVGEQAMNVFYVRDSSGNPVDMKTIEALRKEIGHTMMLNVKKTPVSASQPEAKGWAKT 434
Query: 352 GFFLGNFFK 360
FF GN +
Sbjct: 435 SFFFGNLLE 443
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 76/175 (43%), Gaps = 28/175 (16%)
Query: 167 EDKSSR---PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
E+ S+R P+V+V N + T+I + S ++P +L ++V LTD+ +++ +++
Sbjct: 14 ENLSTRINPPRVSVDNTSCNECTLIKVDSMNKPGILLEVVQILTDLDFIITKAYISSDGG 73
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL----------------- 265
F++ G I + I +E A+ + EL
Sbjct: 74 WFMDIFHVTDQQGKKIID----SKTIDYIEKALGPKEYNKDELKTWPGKRVGVHSVGDYT 129
Query: 266 --ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPVD 317
EL DR GLLS+IT + ++ AE+ T ++ YV D T PVD
Sbjct: 130 AIELIGRDRPGLLSEITAVLANLHFNVAAAEVWTHNRRIACVVYVNDYTTCRPVD 184
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDSIRRQIG 329
++ G+L ++ +I + I +A IS+ GG D F+VTD G +D K ID I + +G
Sbjct: 44 NKPGILLEVVQILTDLDFIITKAYISSDGGWFMDIFHVTDQQGKKIIDSKTIDYIEKALG 103
>gi|357481871|ref|XP_003611221.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
gi|355512556|gb|AES94179.1| hypothetical protein MTR_5g011580 [Medicago truncatula]
Length = 441
Score = 347 bits (891), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 182/383 (47%), Positives = 257/383 (67%), Gaps = 23/383 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V +G KI D+ ++ YI+Q L + + + + + V+ E +GTDR
Sbjct: 73 MDVFHVTHQNGSKIIDENILKYIEQSLGSTHNVRTNCSNGLTVL--------ELSGTDRV 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL C+VV A++WTHN R A++++V D +G I+D +++ I+ L NV
Sbjct: 125 GLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCDSGSTIEDSQKIKKIEVRLRNV 184
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G +D R AKTS+S +M+ ERRLHQ+MF DRDYER ++ S VTV N
Sbjct: 185 LKGDNDIRSAKTSVSMS-VMHSERRLHQMMFADRDYERTPI----LKLTSDNTLVTVQNW 239
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
E+ Y+V+ ++ KDR KLLFD+VC LTDM+YVVFH +NT +AY EFYIRH DG PIS
Sbjct: 240 AERGYSVVNIQCKDRIKLLFDVVCNLTDMEYVVFHATINTNSNQAYLEFYIRHKDGTPIS 299
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SE ER+RVIQCL+A++ERRASEG++L+LCTED+ GLL+++ R FREN L++ RAEIST+
Sbjct: 300 SEPERQRVIQCLKASVERRASEGVQLKLCTEDKQGLLAEVMRTFRENGLNVTRAEISTLE 359
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP--KETTTG----- 352
+ FYVTDVTG P DP I+S+R++IG + L+VK ++ + ++ T G
Sbjct: 360 NMATNVFYVTDVTGKPADPTTIESVRQKIGSSNLEVKELPLIYHQKTEREDQTVGIGGAV 419
Query: 353 -FFLGNFFKARTFQTFKLIRSYS 374
+F+G+ + R + LI+S S
Sbjct: 420 LWFIGSLVR-RNLYSLGLIKSCS 441
>gi|217073154|gb|ACJ84936.1| unknown [Medicago truncatula]
Length = 387
Score = 347 bits (890), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 182/312 (58%), Positives = 226/312 (72%), Gaps = 2/312 (0%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +GKKI ++V D IQQ L S+R SVGV EHT+IE TG DRP
Sbjct: 77 MDVFHVTDQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIELTGRDRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV A+LADL CNVV AE+WTHN R A+VV++TD +TG I +P RL+ IK LL V
Sbjct: 137 GLLSEVFAILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLTKIKHLLLYV 196
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
LRG D + A T++S +++RRLHQ+M+ DRDY+ + + ++ VTV +
Sbjct: 197 LRGDIDKKNANTAVSFCS-THKDRRLHQLMYADRDYDIYDGDYSCSTNDRNKLNVTVDDC 255
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
I+K YTV+ +R DRPKLLFD VCT+TDMQYVV+HG VN EAYQE+YIRHVDG PIS
Sbjct: 256 IDKGYTVVNLRCPDRPKLLFDTVCTITDMQYVVYHGTVNAEGPEAYQEYYIRHVDGYPIS 315
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVI CLEAA+ RR SEG++LEL EDRVGLLSD+TRIFREN LS+ RAE++T G
Sbjct: 316 SEAERQRVIHCLEAAVRRRTSEGVKLELSGEDRVGLLSDVTRIFRENGLSVCRAEVTTRG 375
Query: 300 GKVKDTFYVTDV 311
+ + FYVTDV
Sbjct: 376 SQAMNVFYVTDV 387
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + T+I + S ++ L ++V LTDM +V +++ F++
Sbjct: 24 PRVTVDNTSSRTTTLIKVDSANKRGSLLEVVQVLTDMNLIVRRAYISSDGGWFMDVFHVT 83
Query: 232 HVDGLPISSEAERERVIQCLEAAIE-----------RRASEGLELELCTEDRVGLLSDIT 280
+G I E +R+ Q L + + A+E +EL DR GLLS++
Sbjct: 84 DQNGKKILQEDVADRIQQSLGPRVRSFRSVRRSVGVQAAAEHTTIELTGRDRPGLLSEVF 143
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPVD-PKIIDSIRRQIGHTKLQVKRS 338
I + ++ AE+ T ++ Y+T D TG P+D P + I+ H L V R
Sbjct: 144 AILADLKCNVVAAEVWTHNSRMASVVYITDDTTGLPIDNPDRLTKIK----HLLLYVLRG 199
Query: 339 TI 340
I
Sbjct: 200 DI 201
>gi|224074729|ref|XP_002304443.1| predicted protein [Populus trichocarpa]
gi|222841875|gb|EEE79422.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 347 bits (889), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 192/384 (50%), Positives = 249/384 (64%), Gaps = 24/384 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ DK VI+YI+Q L T + S G+ T++E TGTDR
Sbjct: 73 MDVFHVTDLNGNKLTDKSVINYIEQSLVTIHYGRKT--GSNGL------TALELTGTDRV 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL CNVV+A++WTHN R AA++ V D ++G I+D +++ I+ L NV
Sbjct: 125 GLLSEVFAVLADLQCNVVDAKVWTHNGRIAALMFVKDCNSGSPIEDTQQIDRIEARLRNV 184
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G +D R AKT +S + + ERRLHQ+MF DRDYER ++ P VTV N
Sbjct: 185 LKGDNDIRSAKTMVSM-AVTHTERRLHQMMFADRDYERNPI----LQPSGDSPVVTVQNW 239
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+E+ Y+V+ ++ +DR KLLFD+VCTLTDM+Y+VFH + T AY EFYIRH DG PIS
Sbjct: 240 VERGYSVVNVQCRDRTKLLFDVVCTLTDMEYIVFHATIKTSGDRAYLEFYIRHTDGTPIS 299
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SE ER+RVIQCL+AA+ERR SEG+ LELCT DR LL+D+TR FREN L++ RAEIST
Sbjct: 300 SEPERQRVIQCLQAAVERRVSEGVRLELCTLDRQCLLADVTRTFRENGLNVTRAEISTTR 359
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE---------TT 350
+ FYVTD GN DPK+I+S+R++IG + L+VK L E T
Sbjct: 360 DMALNVFYVTDAIGNAADPKLIESVRQKIGMSSLKVKELPPLVYHQEAEREDQTAGVAGT 419
Query: 351 TGFFLGNFFKARTFQTFKLIRSYS 374
LG+ K R LIRSYS
Sbjct: 420 VLLSLGSLVK-RNLYHLGLIRSYS 442
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + TV+ + S + +L + V LTD+ + +++ F++
Sbjct: 20 PRVVIDNAVCPKATVVKVDSARKHGILLEAVQVLTDLNLSIKKAYISSDGRWFMDVFHVT 79
Query: 232 HVDGLPISSEAERERVIQCLEAAI------ERRASEGL-ELELCTEDRVGLLSDITRIFR 284
++G ++ ++ VI +E ++ + S GL LEL DRVGLLS++ +
Sbjct: 80 DLNGNKLTDKS----VINYIEQSLVTIHYGRKTGSNGLTALELTGTDRVGLLSEVFAVLA 135
Query: 285 ENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPV-DPKIIDSIRRQI 328
+ ++ A++ T G++ +V D +G+P+ D + ID I ++
Sbjct: 136 DLQCNVVDAKVWTHNGRIAALMFVKDCNSGSPIEDTQQIDRIEARL 181
>gi|449528978|ref|XP_004171478.1| PREDICTED: uncharacterized LOC101205369 [Cucumis sativus]
Length = 450
Score = 347 bits (889), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 198/390 (50%), Positives = 260/390 (66%), Gaps = 28/390 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G+K+ D+ VI Y++Q L T R + T T++E TGTDR
Sbjct: 73 MDVFHVTDQNGEKLTDESVISYLEQSLGT-----THYRRNEEFNGTT--TALELTGTDRV 125
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D +++ TI L +V
Sbjct: 126 GLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVARLRSV 185
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G +D R AKTS+S + + ERRLHQ+MF DRDYER K + ++ +S P VTV N
Sbjct: 186 LKGDNDIRSAKTSVSM-AVTHTERRLHQMMFADRDYER--KPILKLNADNS-PAVTVQNC 241
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
E+ Y+V+ ++ KDR KLLFD++ TLTDMQYVVFH +NT + AY EFYIRH DG PIS
Sbjct: 242 AERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFYIRHSDGTPIS 301
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVIQCL+AAI+RRASEG+ LELCTEDR GLL+D+ R FREN L++ RAEIST
Sbjct: 302 SEAERQRVIQCLQAAIQRRASEGVRLELCTEDRPGLLADVMRTFRENGLNVTRAEISTTR 361
Query: 300 GKVKDT-------FYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR--STILAPKPPKETT 350
++ T FYVTDV GN D K I+S+R++IG + L+VK ST +E T
Sbjct: 362 AEISTTRDMALNVFYVTDVVGNVADQKTIESVRQRIGLSNLKVKELPSTYHQTTEREEQT 421
Query: 351 TG------FFLGNFFKARTFQTFKLIRSYS 374
G F LG+ + R LIRS S
Sbjct: 422 FGVGGAVLFTLGSMVR-RNLYNLGLIRSCS 450
>gi|449459664|ref|XP_004147566.1| PREDICTED: uncharacterized protein LOC101209959 [Cucumis sativus]
gi|449520363|ref|XP_004167203.1| PREDICTED: uncharacterized LOC101209959 [Cucumis sativus]
Length = 448
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 189/383 (49%), Positives = 254/383 (66%), Gaps = 23/383 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ VI Y++Q L T P+ + + T++E TGTDR
Sbjct: 80 MDVFHVTDLEGNKLTDEGVISYLEQSLATIHCGKPA--------TSNDLTALELTGTDRV 131
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLA+L C+VV A++WTHN R A++++V D ++G IK+ +R+ TI L NV
Sbjct: 132 GLLSEVFAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIKESERIDTIVGRLRNV 191
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G DD AKTS+S + + ERRLHQ+MF DRDYER K V + + S P VTV N
Sbjct: 192 LKGDDDILYAKTSVSMT-VTHTERRLHQMMFADRDYER--KPVQQHTEDS--PVVTVQNL 246
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+E+ Y+V+ ++ KDR KLLFD++CT+TDM YVVFHG + T R AY EFYIRH DG PIS
Sbjct: 247 VERGYSVVNIQCKDRMKLLFDVICTMTDMDYVVFHGTITTSRHRAYLEFYIRHTDGTPIS 306
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAER+RVIQCL+A+IERR S G+ LELCT DR LL+D+TR FREN L++ RAE+ST
Sbjct: 307 SEAERQRVIQCLQASIERRTSRGVRLELCTTDRPCLLADVTRTFRENGLNVTRAEVSTSQ 366
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP----KETTTG--- 352
+ FYVTD G+ D K+IDS+R +IG + L+VK +++ + + + G
Sbjct: 367 EVALNLFYVTDGHGSAADTKMIDSVREKIGMSNLKVKELPLVSQQKTEGEEQAASVGGAV 426
Query: 353 -FFLGNFFKARTFQTFKLIRSYS 374
LG+ + R LIRSYS
Sbjct: 427 LLSLGSILR-RNLYNLGLIRSYS 448
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 14/167 (8%)
Query: 168 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
++ + P+V + N + + T++ + S R +L + V LTD+ + +++
Sbjct: 22 NRMNTPRVVIDNAVCETATLVKVDSARRHGILLEAVQVLTDLNLSIQKAYISSDGIWFMD 81
Query: 227 EFYIRHVDGLPISSEAERERVIQCLEAAIE-------RRASEGLELELCTEDRVGLLSDI 279
F++ ++G ++ E VI LE ++ +++ LEL DRVGLLS++
Sbjct: 82 VFHVTDLEGNKLTDEG----VISYLEQSLATIHCGKPATSNDLTALELTGTDRVGLLSEV 137
Query: 280 TRIFRENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPV-DPKIIDSI 324
+ E + A++ T G++ YV D +G+P+ + + ID+I
Sbjct: 138 FAVLAELQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIKESERIDTI 184
>gi|356514172|ref|XP_003525780.1| PREDICTED: uncharacterized protein LOC100802262 [Glycine max]
Length = 441
Score = 343 bits (881), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 175/337 (51%), Positives = 240/337 (71%), Gaps = 14/337 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ DK V+ YI+Q L + + + + + T +E TGTDR
Sbjct: 73 MDVFHVTDENGDKLTDKSVLSYIEQSLGSIHNAKTNHSNGL--------TILELTGTDRV 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLA+ C+VV+A++WTHN R A++++V D ++G I+D +R+STI+ L NV
Sbjct: 125 GLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSGTLIEDSQRISTIEARLRNV 184
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G +D R AKTS++ +++ ERRLHQ+M+ DRDY+R ++ S P VTV N
Sbjct: 185 LKGDNDIRNAKTSVTN-AVLHAERRLHQMMYTDRDYQRNPI----LKFASVTPIVTVQNW 239
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
E+ Y+V+ ++ KDR KLLFD+VC LTDM+YVVFH + T +AY EFYIRH DG PIS
Sbjct: 240 AERGYSVVNIQCKDRVKLLFDVVCNLTDMEYVVFHATIKTTIDQAYLEFYIRHRDGTPIS 299
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SE ER RVIQCL+AA+ERRA EG+ LELCTEDR GLL+++ R FREN +++ RAEISTIG
Sbjct: 300 SEPERHRVIQCLQAAVERRAYEGVRLELCTEDRQGLLAEVMRTFRENGMNVTRAEISTIG 359
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 336
+ FYVTD G PVDPKI++S+R+++G + L+VK
Sbjct: 360 NMASNVFYVTDAVGYPVDPKIVESVRQKVGLSNLKVK 396
>gi|18411317|ref|NP_565146.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699222|ref|NP_849896.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|30699224|ref|NP_849897.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|79321337|ref|NP_001031289.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|186495930|ref|NP_001117608.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|13430820|gb|AAK26032.1|AF360322_1 unknown protein [Arabidopsis thaliana]
gi|2829923|gb|AAC00631.1| Similar to uridylyl transferases [Arabidopsis thaliana]
gi|21280959|gb|AAM44939.1| unknown protein [Arabidopsis thaliana]
gi|22138096|gb|AAM93428.1| ACR3 [Arabidopsis thaliana]
gi|222424164|dbj|BAH20041.1| AT1G76990 [Arabidopsis thaliana]
gi|332197796|gb|AEE35917.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197797|gb|AEE35918.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197798|gb|AEE35919.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197799|gb|AEE35920.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
gi|332197800|gb|AEE35921.1| ACT domain-containing protein 3 [Arabidopsis thaliana]
Length = 453
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 183/379 (48%), Positives = 253/379 (66%), Gaps = 24/379 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTG 56
MDVF+V D G K+ D + IDYI++ L + S + VGV +HTSIE
Sbjct: 76 MDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDHTSIEIIA 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SEV AVLADL+ NVV AE WTHN R A V++V D++T A+ DP+RLS+++E
Sbjct: 136 RDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPERLSSMEEQ 195
Query: 117 LFNVLRGYD--DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS--- 171
L NVLRG + D + A+TSLS G + +RRLHQ+ F DRDYE AV +++D +S
Sbjct: 196 LNNVLRGCEEQDEKFARTSLSI-GSTHVDRRLHQMFFADRDYE----AVTKLDDSASCGF 250
Query: 172 RPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
P++TV + E K Y+VI + +DRPKL+FDIVCTLTDMQY+VFH +++ + A QE++I
Sbjct: 251 EPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFI 310
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 290
RH DG + +E E+ERV++CLEAAI RR SEG LELC +DRVGLLS++TRI RE+ LS+
Sbjct: 311 RHKDGCTLDTEGEKERVVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRILREHGLSV 370
Query: 291 KRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETT 350
RA ++T+G + + FYV D +GNPVD K I+++R +IGH+ + ++ + + K +E
Sbjct: 371 SRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKVPSRKWKEEGQ 430
Query: 351 TG---------FFLGNFFK 360
G FF GN +
Sbjct: 431 AGTGGGWAKTSFFFGNLLE 449
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ G+L ++ ++ + L+I +A IS+ GG D F+VTD GN V D K ID I + +G
Sbjct: 44 NKPGILLEVVQVLTDLDLTITKAYISSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLG 103
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 83/185 (44%), Gaps = 21/185 (11%)
Query: 167 EDKSSR---PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
E+ SSR P V++ N K+ T++ + S ++P +L ++V LTD+ + +++
Sbjct: 14 ENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYISSDGG 73
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEG---------------LELEL 267
F++ G ++ + + + L AS+ +E+
Sbjct: 74 WFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDHTSIEI 133
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIR 325
DR GLLS+++ + + ++++ AE T ++ YV D T V DP+ + S+
Sbjct: 134 IARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPERLSSME 193
Query: 326 RQIGH 330
Q+ +
Sbjct: 194 EQLNN 198
>gi|449460443|ref|XP_004147955.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205369 [Cucumis sativus]
Length = 449
Score = 342 bits (877), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 197/389 (50%), Positives = 258/389 (66%), Gaps = 27/389 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G+K+ D+ VI Y++Q L T R + T T++E TGTDR
Sbjct: 73 MDVFHVTDQNGEKLTDESVISYLEQSLGT-----THYRRNEEFNGTT--TALELTGTDRV 125
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL C+VV A++WTHN R A++++V D ++G I+D +++ TI L +V
Sbjct: 126 GLLSEVFAVLADLQCDVVEAKVWTHNGRIASLIYVKDCNSGSPIEDRQKIDTIVARLRSV 185
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L+G +D R AKTS+S + + ERRLHQ+MF DRDYER K + ++ +S P VTV N
Sbjct: 186 LKGDNDIRSAKTSVSM-AVTHTERRLHQMMFADRDYER--KPILKLNADNS-PAVTVQNC 241
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
E+ Y+V+ ++ KDR KLLFD++ TLTDMQYVVFH +NT + AY EFYIRH DG PIS
Sbjct: 242 AERGYSVVCVQCKDRTKLLFDVIFTLTDMQYVVFHANINTAQERAYLEFYIRHSDGTPIS 301
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLS------DITRIFRENSLSIKRA 293
SEAER+RVIQCL+AAI+RRASEG+ LELCTEDR GLL+ D+ R FREN L++ RA
Sbjct: 302 SEAERQRVIQCLQAAIQRRASEGVRLELCTEDRPGLLADVMRTFDVMRTFRENGLNVTRA 361
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR--STILAPKPPKETTT 351
EIST + FYVTDV GN D K I+S+R++IG + L+VK ST +E T
Sbjct: 362 EISTTRHMALNVFYVTDVVGNVADQKTIESVRQRIGLSNLKVKELPSTYHQTTEREEQTF 421
Query: 352 G------FFLGNFFKARTFQTFKLIRSYS 374
G F LG+ + R LIRS S
Sbjct: 422 GVGGAVLFTLGSMVR-RNLYNLGLIRSCS 449
>gi|116781547|gb|ABK22147.1| unknown [Picea sitchensis]
Length = 466
Score = 341 bits (875), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 192/390 (49%), Positives = 252/390 (64%), Gaps = 19/390 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQ-----RLETDASFAPSLRSSVGVMPTEEHTSIEFT 55
MDVF+V D G K+ D+ +I+YIQQ R+ + L VGV E+T+IE T
Sbjct: 76 MDVFHVTDQLGDKLTDESIIEYIQQSLGAKRVISSREVKTCLGRIVGVQSIGEYTAIELT 135
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
GTDRPGL SE+ AVL CNVV AE WTHN R A VV+VTD S+ I+D RLSTIK
Sbjct: 136 GTDRPGLLSEISAVLTSFSCNVVAAESWTHNMRVACVVYVTDESSNRPIEDEVRLSTIKG 195
Query: 116 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKSSRPQ 174
L NVL+G DD K + G+ +RERRLHQ+MF DRDYE + + + D++ +P
Sbjct: 196 QLSNVLKGNDDSTKGVKTDFSMGLTHRERRLHQLMFADRDYECSSDSSNPSLLDENMKPV 255
Query: 175 VTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
+TV N EK Y+V+ ++ +DRPKLLFD VCTLTDMQYVVFH + A QE+YIRH+
Sbjct: 256 ITVENCNEKGYSVVNIQCRDRPKLLFDTVCTLTDMQYVVFHASITCNLPYALQEYYIRHM 315
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG + +E E+ RVI+CLEAAI RRASEGL LEL DR+GLLSD+TR+FREN LS+ RA
Sbjct: 316 DGCTLDTEGEKHRVIKCLEAAIGRRASEGLSLELSASDRIGLLSDVTRMFRENGLSVTRA 375
Query: 294 EISTIGGKVKDTFYVTDV-TGN---PVDPKIIDSIRRQIGHTK-LQVKR--STILAPKPP 346
+++T G K + FYV D +GN +D K+++++RR+IGHT LQVK I P
Sbjct: 376 DVTTRGDKAINVFYVRDASSGNLAINIDMKVVEAMRREIGHTMFLQVKNMPGDIAYNSLP 435
Query: 347 KETTTG--FFLGNFFKA---RTFQTFKLIR 371
++ + F + FKA R F++I+
Sbjct: 436 IDSRSKFRFSFASLFKAQLDRISYNFRMIK 465
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 26/197 (13%)
Query: 153 DRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 211
D +YE +E+ + + P V++ N D T+I + S ++ +L ++V LTD+
Sbjct: 10 DPEYENLERRI-------NPPSVSIDNDTCPDCTLIKVDSANKHGILLEVVQLLTDLDLT 62
Query: 212 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA--AIERRA---------- 259
+ +++ F++ G ++ E+ E + Q L A I R
Sbjct: 63 ISKAYISSDGGWFMDVFHVTDQLGDKLTDESIIEYIQQSLGAKRVISSREVKTCLGRIVG 122
Query: 260 ----SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN- 314
E +EL DR GLLS+I+ + S ++ AE T +V YVTD + N
Sbjct: 123 VQSIGEYTAIELTGTDRPGLLSEISAVLTSFSCNVVAAESWTHNMRVACVVYVTDESSNR 182
Query: 315 PVDPKI-IDSIRRQIGH 330
P++ ++ + +I+ Q+ +
Sbjct: 183 PIEDEVRLSTIKGQLSN 199
>gi|21593552|gb|AAM65519.1| unknown [Arabidopsis thaliana]
Length = 453
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 182/379 (48%), Positives = 252/379 (66%), Gaps = 24/379 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTG 56
MDVF+V D G K+ D + IDYI++ L + S + VGV +HTSIE
Sbjct: 76 MDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDHTSIEIIA 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SEV AVLADL+ NVV AE WTHN R A V++V D++T A+ DP+RLS+++E
Sbjct: 136 RDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPERLSSMEEQ 195
Query: 117 LFNVLRGYD--DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS--- 171
L NVLRG + D + A+TSLS G + +RRLHQ+ F DRDYE AV +++D +S
Sbjct: 196 LNNVLRGCEEQDEKFARTSLSI-GSTHVDRRLHQMFFADRDYE----AVTKLDDSASCGF 250
Query: 172 RPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
P++TV + E K Y+VI + +DRPKL+FDIVCTLTDMQY+VFH +++ + A QE++I
Sbjct: 251 EPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFI 310
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 290
RH DG + +E E+ER ++CLEAAI RR SEG LELC +DRVGLLS++TRI RE+ LS+
Sbjct: 311 RHKDGCTLDTEGEKERXVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRILREHGLSV 370
Query: 291 KRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETT 350
RA ++T+G + + FYV D +GNPVD K I+++R +IGH+ + ++ + + K +E
Sbjct: 371 SRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKVPSRKWKEEGQ 430
Query: 351 TG---------FFLGNFFK 360
G FF GN +
Sbjct: 431 AGTGGGWAKTSFFFGNLLE 449
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ G+L ++ ++ + L+I +A IS+ GG D F+VTD GN V D K ID I + +G
Sbjct: 44 NKPGILLEVVQVLTDLDLTITKAYISSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLG 103
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 83/185 (44%), Gaps = 21/185 (11%)
Query: 167 EDKSSR---PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
E+ SSR P V++ N K+ T++ + S ++P +L ++V LTD+ + +++
Sbjct: 14 ENLSSRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYISSDGG 73
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEG---------------LELEL 267
F++ G ++ + + + L AS+ +E+
Sbjct: 74 WFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDHTSIEI 133
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIR 325
DR GLLS+++ + + ++++ AE T ++ YV D T V DP+ + S+
Sbjct: 134 IARDRPGLLSEVSAVLADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPERLSSME 193
Query: 326 RQIGH 330
Q+ +
Sbjct: 194 EQLNN 198
>gi|356509344|ref|XP_003523410.1| PREDICTED: uncharacterized protein LOC100789173 [Glycine max]
Length = 445
Score = 340 bits (872), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 183/370 (49%), Positives = 249/370 (67%), Gaps = 14/370 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEHTSIEFTG 56
MDVF+V D GKKI D + ID+I++ L + +++ VGV +HT+IE G
Sbjct: 76 MDVFHVTDQQGKKITDSKTIDFIEKALGPKSQSTEGVKNWPSKRVGVHSVGDHTAIELIG 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVLA+LH NV AE+WTHN R A V++V D +T A+ + RLS ++E
Sbjct: 136 RDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVND-ATNQAVDEANRLSLMEEQ 194
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK--SSRPQ 174
L N+LRG D + A+TS S G + +RRLHQ++F DRDYE AV R D S RP+
Sbjct: 195 LNNILRGCDGEKVARTSFSM-GSTHMDRRLHQMLFADRDYE--SYAVAREVDSPPSLRPK 251
Query: 175 VTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
+T+ E K Y+V++++ KDR KL+FDIVCTLTDMQYVVFH V++ A QE++IRH+
Sbjct: 252 ITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIRHM 311
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG + ++ E+ERVIQC+EAAI RR SEG+ LELC +DRVGLLS++TRI REN L++ RA
Sbjct: 312 DGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCRA 371
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL-QVKR--STILAPKPPKETT 350
+ST G + + FYV D +GNPVD K ++++R++IG T + VKR S AP+
Sbjct: 372 GVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVPSNAKAPETRGWAK 431
Query: 351 TGFFLGNFFK 360
T FF GN +
Sbjct: 432 TSFFFGNLLE 441
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V++ N D T+I + S ++P +L ++V LTD+ +++ +++ F++
Sbjct: 23 PRVSMDNASCHDCTLIKVDSVNKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVT 82
Query: 232 HVDGLPISSEAERERVIQCLEAAI--ERRASEGLE-----------------LELCTEDR 272
G I+ + I +E A+ + +++EG++ +EL DR
Sbjct: 83 DQQGKKITD----SKTIDFIEKALGPKSQSTEGVKNWPSKRVGVHSVGDHTAIELIGRDR 138
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
GLLS+I+ + ++ AE+ T ++ YV D T VD
Sbjct: 139 PGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDATNQAVD 183
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ G+L ++ +I + I +A IS+ GG D F+VTD G + D K ID I + +G
Sbjct: 44 NKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVTDQQGKKITDSKTIDFIEKALG 103
>gi|302784474|ref|XP_002974009.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
gi|302803458|ref|XP_002983482.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300148725|gb|EFJ15383.1| hypothetical protein SELMODRAFT_180275 [Selaginella moellendorffii]
gi|300158341|gb|EFJ24964.1| hypothetical protein SELMODRAFT_100599 [Selaginella moellendorffii]
Length = 477
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 183/402 (45%), Positives = 257/402 (63%), Gaps = 33/402 (8%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D DG K+ D++VI +I+ + A S ++GV EHT+IE TG DRP
Sbjct: 81 MDVFHVTDRDGNKLSDEKVIAHIEHKGVCQAYRTCSGARTIGVQSLAEHTAIELTGNDRP 140
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH-STGYAIKDPKRLSTIKELLFN 119
GL SE+ AVLA L CNVV AE+WTHN R A +V+VTDH G +KDP +L IK++L
Sbjct: 141 GLLSEISAVLASLGCNVVAAEVWTHNTRVACMVYVTDHEGHGGPVKDPTKLCHIKQMLGQ 200
Query: 120 VLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER-----------VEKAVGRVE 167
V++G D + A+T + G+ + ERRLHQ+M D++ E ++
Sbjct: 201 VMKGDSLDGKTARTDFAM-GLTHTERRLHQMMSADKEEEMEVAEEEAALSPAPTSISDSV 259
Query: 168 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
D RP VTV N +EK Y+V+T++ DRPKLLFD VCTLTDM+YVVFH +++ A+Q
Sbjct: 260 DYKGRPTVTVKNCVEKGYSVVTVQCADRPKLLFDTVCTLTDMEYVVFHATIDSEGPNAFQ 319
Query: 227 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 286
E+YIRH+DG +++E ER+RV++CLEAAI RRAS+G+ LEL T+DR+GLLSD+TRIFREN
Sbjct: 320 EYYIRHLDGYTLNTETERQRVVRCLEAAILRRASQGVRLELSTQDRIGLLSDVTRIFREN 379
Query: 287 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPP 346
LS+ RAE++T + FYVTD G VD +++++IR ++G L+V + PP
Sbjct: 380 GLSVARAEVTTRDDMAVNVFYVTDANGGSVDMRVVEAIREEVGLAILKVTQERF----PP 435
Query: 347 K-----------ETTTGFFLGNFFKA---RTFQTFKLIRSYS 374
K ++ F LG+FF++ R T L++SY+
Sbjct: 436 KMLHSSPTESADKSAARFSLGSFFRSHSERLLYTLGLLKSYT 477
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 79/173 (45%), Gaps = 15/173 (8%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + + T+I + S +R +L D+V LTD+ + +++ F++
Sbjct: 28 PRVVIDNKVSEHATIIKLDSSNRHGILLDVVQVLTDLDLSILKAFISSDGGWFMDVFHVT 87
Query: 232 HVDGLPISSEA-----ERERVIQCLEAAIERRA------SEGLELELCTEDRVGLLSDIT 280
DG +S E E + V Q R +E +EL DR GLLS+I+
Sbjct: 88 DRDGNKLSDEKVIAHIEHKGVCQAYRTCSGARTIGVQSLAEHTAIELTGNDRPGLLSEIS 147
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN--PV-DPKIIDSIRRQIGH 330
+ ++ AE+ T +V YVTD G+ PV DP + I++ +G
Sbjct: 148 AVLASLGCNVVAAEVWTHNTRVACMVYVTDHEGHGGPVKDPTKLCHIKQMLGQ 200
>gi|356515959|ref|XP_003526664.1| PREDICTED: uncharacterized protein LOC100797293 [Glycine max]
Length = 445
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 184/370 (49%), Positives = 247/370 (66%), Gaps = 14/370 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS----SVGVMPTEEHTSIEFTG 56
MDVF+V D GKKI D + ID I++ L + +++ VGV ++T+IE G
Sbjct: 76 MDVFHVTDQQGKKITDSKTIDLIEKALGPKSKSTEGVKNWPSKHVGVHSVGDYTAIELIG 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVLA+LH NV AE+WTHN R A V++V D +T DPKRLS ++E
Sbjct: 136 RDRPGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVND-ATNQVADDPKRLSLMEEQ 194
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK--SSRPQ 174
L N+LRG D + A+TS S G + +RRLHQ++F DRDYE AV R D S RP+
Sbjct: 195 LNNILRGCDGEKVARTSFSM-GSTHMDRRLHQMLFADRDYE--SYAVAREVDSPPSLRPR 251
Query: 175 VTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
+T+ E K Y+V++++ KDR KL+FDIVCTLTDMQYVVFH V++ A QE++IRH+
Sbjct: 252 ITIERCEEKGYSVVSVKCKDRAKLMFDIVCTLTDMQYVVFHATVSSDGPYALQEYFIRHM 311
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG + ++ E+ERVIQC+EAAI RR SEG+ LELC +DRVGLLS++TRI REN LS+ RA
Sbjct: 312 DGCTLDTQGEKERVIQCIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLSVCRA 371
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL-QVKR--STILAPKPPKETT 350
+ST G + + FYV D +GNPVD K ++++ ++IG T + VKR S AP+
Sbjct: 372 GVSTRGEQALNVFYVRDASGNPVDMKTMEALCKEIGKTMMVDVKRVPSNTKAPETRGWAK 431
Query: 351 TGFFLGNFFK 360
T FF GN +
Sbjct: 432 TSFFFGNLLE 441
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 25/179 (13%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V+V N D T+I + S ++P +L ++V LTD+ +V+ +++ F++
Sbjct: 23 PRVSVDNASCHDCTLIKIDSVNKPGILLEVVQILTDLDFVITKAYISSDGGWFMDVFHVT 82
Query: 232 HVDGLPISSEAERERVIQCLEAAI--ERRASEGLE-----------------LELCTEDR 272
G I+ + I +E A+ + +++EG++ +EL DR
Sbjct: 83 DQQGKKITD----SKTIDLIEKALGPKSKSTEGVKNWPSKHVGVHSVGDYTAIELIGRDR 138
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIGH 330
GLLS+I+ + ++ AE+ T ++ YV D T DPK + + Q+ +
Sbjct: 139 PGLLSEISAVLANLHFNVFAAEVWTHNRRIACVLYVNDATNQVADDPKRLSLMEEQLNN 197
>gi|302809521|ref|XP_002986453.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
gi|300145636|gb|EFJ12310.1| hypothetical protein SELMODRAFT_124305 [Selaginella moellendorffii]
Length = 452
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 183/369 (49%), Positives = 243/369 (65%), Gaps = 12/369 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVG----VMPTEEHTSIEFT 55
MDVF+V D G K+ D+ +IDYIQQ L S +++ +G + E T+IE
Sbjct: 75 MDVFHVTDQLGNKLIDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRFSLRSNTEQTAIELC 134
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
G DRPGL S++ VL D+ CNVV AE+WTHN R A VV+VTD TG I+D K+L+ IK
Sbjct: 135 GRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGPIEDEKKLAVIKA 194
Query: 116 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE--DKSSRP 173
L L+G + + +KT + P +++ ERRLHQIM D + E V DK+ RP
Sbjct: 195 RLSQALQGDESGKGSKTDI-PMAVLHTERRLHQIMSADFAAIQPESTNTFVAAADKT-RP 252
Query: 174 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 232
++V N EK Y+V+ +R KDRPKLLFD VCTLTDM+YVVFH + + + AYQE+YIR
Sbjct: 253 AISVQNCAEKGYSVVNVRCKDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAYQEYYIRL 312
Query: 233 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 292
+DG + SEAE+E V++CLEAAIERR G+ LELCT+DRVGLLSD+TRIFREN LS+ R
Sbjct: 313 MDGCTLKSEAEQEYVVKCLEAAIERRTGGGIRLELCTKDRVGLLSDVTRIFRENGLSVTR 372
Query: 293 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 352
A++ST G K + FYVTD +GNPVD +I+++ R++IG + LQVK T +P E +
Sbjct: 373 ADVSTQGDKAVNVFYVTDASGNPVDRRIVEATRKEIGQSILQVKDLTPSSPNSQHEVASK 432
Query: 353 --FFLGNFF 359
F G F
Sbjct: 433 SRFSFGTFL 441
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 78/169 (46%), Gaps = 21/169 (12%)
Query: 166 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
V D +S P T++ T + + SK++ +L ++V LTD+ + +++
Sbjct: 20 VIDNTSCPDATLIKA----TPLPVDSKNKHGILLEVVQVLTDLDLAISKAYISSDGGWFM 75
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEA-----------AIERRAS-----EGLELELCT 269
F++ G + E + + Q L A + RR S E +ELC
Sbjct: 76 DVFHVTDQLGNKLIDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRFSLRSNTEQTAIELCG 135
Query: 270 EDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPVD 317
DR GLLSDI+ + ++ ++ AE+ T +V YVTD VTG P++
Sbjct: 136 RDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGPIE 184
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDSIRRQ 327
++++ G+L ++ ++ + L+I +A IS+ GG D F+VTD GN +D IID I++
Sbjct: 41 SKNKHGILLEVVQVLTDLDLAISKAYISSDGGWFMDVFHVTDQLGNKLIDEGIIDYIQQS 100
Query: 328 IG 329
+G
Sbjct: 101 LG 102
>gi|356546978|ref|XP_003541896.1| PREDICTED: uncharacterized protein LOC100797658 [Glycine max]
Length = 449
Score = 337 bits (863), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 183/372 (49%), Positives = 246/372 (66%), Gaps = 14/372 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTG 56
MDVF+V D GKKI D + ID+I++ L ++S VGV +HT IE G
Sbjct: 76 MDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVKSWKGKRVGVHSIGDHTVIELIG 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVLA L NV+ AE+WTHN R A V++V D +T A+ D KRLS I+E
Sbjct: 136 RDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVND-ATNQAMDDSKRLSIIEEQ 194
Query: 117 LFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS-RPQ 174
L ++LRG DD + A+TS S GI + +RRLHQ++F DRDYE V+ RP
Sbjct: 195 LNHILRGCEDDEKVARTSFSM-GITHMDRRLHQMLFADRDYESAGVTTTDVDCPPCFRPN 253
Query: 175 VTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
+ + I EK Y+V++++ KDR KL+FDIVCTLTDM+YVVFH +++ A QE++IRH+
Sbjct: 254 IRIERIVEKGYSVVSVKCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFIRHM 313
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG + +E E+ER I+C+EAAI+RR SEG+ LELC +DRVGLLS++TRI REN L++ RA
Sbjct: 314 DGCTLDTEGEKERAIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVSRA 373
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL-QVKRSTILAPKPPKET--- 349
+ST+G K + FYV D +GNPVD KII+++ ++IG T + VKR K P ET
Sbjct: 374 GVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQTVMVNVKRIPAAYAKAPVETRGW 433
Query: 350 -TTGFFLGNFFK 360
T FF GN +
Sbjct: 434 ARTSFFFGNLLE 445
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 81/179 (45%), Gaps = 25/179 (13%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V+V N D T+I S ++P +L ++V LTD+ +++ +++ F++
Sbjct: 23 PRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVT 82
Query: 232 HVDGLPISSEAERERVIQCLEAAI--ERRASEGLE-----------------LELCTEDR 272
G I+ + I +E + + +++EG++ +EL DR
Sbjct: 83 DQQGKKITD----SKTIDFIEKTLGPKGQSTEGVKSWKGKRVGVHSIGDHTVIELIGRDR 138
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIGH 330
GLLS+I+ + ++ AE+ T ++ YV D T + D K + I Q+ H
Sbjct: 139 PGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDATNQAMDDSKRLSIIEEQLNH 197
>gi|356563282|ref|XP_003549893.1| PREDICTED: uncharacterized protein LOC100794729 [Glycine max]
Length = 441
Score = 337 bits (863), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 182/383 (47%), Positives = 254/383 (66%), Gaps = 23/383 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ V+ YI+Q L + + S + + T +E TGTDR
Sbjct: 73 MDVFHVTDQNGNKLTDESVLSYIEQSLGSIHNGKTSHSNGL--------TILELTGTDRV 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLA+ C+VV+A++WTHN R A++++V D ++ I+D +R+STI+ L NV
Sbjct: 125 GLLSEVFAVLAEQQCDVVDAKVWTHNGRIASLIYVKDSNSETPIEDSQRISTIEARLRNV 184
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G +D R AKTS++ +++ ERRLHQ+M+ DRDY+R + + S P VTV N
Sbjct: 185 LKGDNDIRNAKTSVTN-AVLHAERRLHQMMYTDRDYQR--NPIFKF--SSDTPIVTVQNW 239
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
E+ Y+V+ ++ KDR KLLFD+VC LT+M+YVVFH + T +AY EFYIRH DG PIS
Sbjct: 240 AERGYSVVNVQCKDRVKLLFDVVCNLTEMEYVVFHATIKTTIDQAYLEFYIRHKDGTPIS 299
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SE ER RVIQCL+AA+ERRA EG+ LELCTEDR GLL+++ R FREN L++ RAEISTIG
Sbjct: 300 SEPERHRVIQCLQAAVERRAFEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRAEISTIG 359
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTIL----APKPPKETTTG--- 352
+ FYVTD G P DPKI++S+R+++G + L+VK ++ A + + G
Sbjct: 360 DMASNVFYVTDAIGYPADPKIVESVRQKVGLSNLKVKELPLVCHEKAEREDQPVGVGGAV 419
Query: 353 -FFLGNFFKARTFQTFKLIRSYS 374
LG+ + R LI+S S
Sbjct: 420 LLCLGSLVR-RNLYNLGLIKSCS 441
Score = 44.3 bits (103), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 4/146 (2%)
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
+ S P+V + N + T++ + S + +L D V L+D+ + +++
Sbjct: 16 RMSTPRVVIDNAVCSTATIVKVDSARKHGILIDAVQVLSDLNLSIKKAYISSDGRWFMDV 75
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE--GLE-LELCTEDRVGLLSDITRIFR 284
F++ +G ++ E+ + Q L + + S GL LEL DRVGLLS++ +
Sbjct: 76 FHVTDQNGNKLTDESVLSYIEQSLGSIHNGKTSHSNGLTILELTGTDRVGLLSEVFAVLA 135
Query: 285 ENSLSIKRAEISTIGGKVKDTFYVTD 310
E + A++ T G++ YV D
Sbjct: 136 EQQCDVVDAKVWTHNGRIASLIYVKD 161
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
G+L D ++ + +LSIK+A IS+ G D F+VTD GN + D ++ I + +G
Sbjct: 44 GILIDAVQVLSDLNLSIKKAYISSDGRWFMDVFHVTDQNGNKLTDESVLSYIEQSLG 100
>gi|302794344|ref|XP_002978936.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
gi|300153254|gb|EFJ19893.1| hypothetical protein SELMODRAFT_109915 [Selaginella moellendorffii]
Length = 452
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 182/369 (49%), Positives = 238/369 (64%), Gaps = 12/369 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVGVMPTEEHTSIEFT 55
MDVF+V D G K+ D+ +IDYIQQ L L V + E T+IE
Sbjct: 75 MDVFHVTDQLGNKLTDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRVSLRSNTEQTAIELC 134
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
G DRPGL S++ VL D+ CNVV AE+WTHN R A VV+VTD TG I+D K+L+ IK
Sbjct: 135 GRDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGPIEDEKKLAVIKA 194
Query: 116 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE--DKSSRP 173
L L+G + + +KT + P +++ ERRLHQIM D + E V DK+ RP
Sbjct: 195 RLSQALQGDESGKGSKTDI-PMAVLHTERRLHQIMSADFAAIQPESTNTFVAAADKT-RP 252
Query: 174 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 232
++V N EK Y+V+ +R DRPKLLFD VCTLTDM+YVVFH + + + AYQE+YIR
Sbjct: 253 AISVQNCAEKGYSVVNVRCNDRPKLLFDTVCTLTDMKYVVFHAAIRSEGSFAYQEYYIRL 312
Query: 233 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 292
+DG + SEAE+E V++CLEAAIERR G+ LELCT+DRVGLLSD+TRIFREN LS+ R
Sbjct: 313 MDGCTLKSEAEQEYVVKCLEAAIERRTGGGIRLELCTKDRVGLLSDVTRIFRENGLSVTR 372
Query: 293 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 352
A++ST G K + FYVTD +GNPVD +I+++ R++IG + LQVK T +P E +
Sbjct: 373 ADVSTQGDKAVNVFYVTDASGNPVDRRIVEATRKEIGQSILQVKDLTPSSPNSQHEVASK 432
Query: 353 --FFLGNFF 359
F G F
Sbjct: 433 SRFSFGTFL 441
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 79/169 (46%), Gaps = 21/169 (12%)
Query: 166 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
V D +S P T++ T + + SK++ +L ++V LTD+ + +++
Sbjct: 20 VIDNTSCPDATLIKA----TPLPVDSKNKHGILLEVVQVLTDLDLAISKAYISSDGGWFM 75
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEA-----------AIERRAS-----EGLELELCT 269
F++ G ++ E + + Q L A + RR S E +ELC
Sbjct: 76 DVFHVTDQLGNKLTDEGIIDYIQQSLGAKQDSQTTEVQTCLGRRVSLRSNTEQTAIELCG 135
Query: 270 EDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPVD 317
DR GLLSDI+ + ++ ++ AE+ T +V YVTD VTG P++
Sbjct: 136 RDRPGLLSDISGVLKDMMCNVVAAEVWTHNLRVACVVYVTDEVTGGPIE 184
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
++++ G+L ++ ++ + L+I +A IS+ GG D F+VTD GN + D IID I++
Sbjct: 41 SKNKHGILLEVVQVLTDLDLAISKAYISSDGGWFMDVFHVTDQLGNKLTDEGIIDYIQQS 100
Query: 328 IG 329
+G
Sbjct: 101 LG 102
>gi|297839565|ref|XP_002887664.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
gi|297333505|gb|EFH63923.1| hypothetical protein ARALYDRAFT_476859 [Arabidopsis lyrata subsp.
lyrata]
Length = 452
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 181/379 (47%), Positives = 252/379 (66%), Gaps = 25/379 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTG 56
MDVF+V D G K+ D + IDYI++ L + S + VGV +HTSIE
Sbjct: 76 MDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDHTSIEIIA 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SEV A+LADL+ NVV AE WTHN R A V++V D++T A+ DP+RLS ++E
Sbjct: 136 RDRPGLLSEVSAILADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPERLSAMEEQ 195
Query: 117 LFNVLRG--YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR-- 172
L NVLRG +D + A+TSLS G + +RRLHQ+ F D+DYE AV +++D +SR
Sbjct: 196 LNNVLRGCEQEDEKFARTSLSI-GSTHVDRRLHQMFFADKDYE----AVTKLDDFASRGL 250
Query: 173 -PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
P++TV + E K Y+VI + +DRPKL+FDIVCTLTDMQY+VFH +++ + A QE++I
Sbjct: 251 EPKITVEHCEEKGYSVINVSCEDRPKLMFDIVCTLTDMQYIVFHATISSSGSHASQEYFI 310
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 290
RH DG + + E+ERV++CLEAAI RR SEG LELC +DRVGLLS++TRI RE+ LS+
Sbjct: 311 RHKDGCTLDT-GEKERVVKCLEAAIHRRVSEGWSLELCAKDRVGLLSEVTRILREHGLSV 369
Query: 291 KRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETT 350
RA ++T+G + + FYV D +GNPVD K I+++R +IGH+ + ++ + + K +E
Sbjct: 370 SRAGVTTVGEQAVNVFYVKDASGNPVDVKTIEALRGEIGHSMMIDFKNKVPSRKGKEEGQ 429
Query: 351 TG---------FFLGNFFK 360
G FF GN +
Sbjct: 430 AGTGGGWAKTTFFFGNLLE 448
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ G+L ++ ++ + L+I +A IS+ GG D F+VTD GN V D K ID I + +G
Sbjct: 44 NKPGILLEVVQVLTDLDLTITKAYISSDGGWFMDVFHVTDQQGNKVTDSKTIDYIEKVLG 103
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 39/185 (21%), Positives = 83/185 (44%), Gaps = 21/185 (11%)
Query: 167 EDKSSR---PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
E+ S+R P V++ N K+ T++ + S ++P +L ++V LTD+ + +++
Sbjct: 14 ENLSTRINPPSVSIDNTSCKECTLVKVDSMNKPGILLEVVQVLTDLDLTITKAYISSDGG 73
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEG---------------LELEL 267
F++ G ++ + + + L AS+ +E+
Sbjct: 74 WFMDVFHVTDQQGNKVTDSKTIDYIEKVLGPKGHASASQNTWPGKRVGVHSLGDHTSIEI 133
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIR 325
DR GLLS+++ I + ++++ AE T ++ YV D T V DP+ + ++
Sbjct: 134 IARDRPGLLSEVSAILADLNINVVAAEAWTHNRRIACVLYVNDNATSRAVDDPERLSAME 193
Query: 326 RQIGH 330
Q+ +
Sbjct: 194 EQLNN 198
>gi|356552731|ref|XP_003544716.1| PREDICTED: uncharacterized protein LOC100789044 [Glycine max]
Length = 448
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 179/371 (48%), Positives = 244/371 (65%), Gaps = 13/371 (3%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS----VGVMPTEEHTSIEFTG 56
MDVF+V D GKKI D + ID+I++ L + VGV +HT+IE G
Sbjct: 76 MDVFHVTDQQGKKITDSKTIDFIEKTLGPKGQSTEGVNCWQGKRVGVHSIGDHTAIELIG 135
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVLA L NV+ AE+WTHN R A V++V D +T A+ D KRLS ++E
Sbjct: 136 RDRPGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVND-ATNQAMDDSKRLSIMEEQ 194
Query: 117 LFNVLRGY-DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS-RPQ 174
L ++LRG DD + A+TS + G + +RRLHQ++F DRDYE V V+ S RP+
Sbjct: 195 LNHILRGCEDDEKVARTSFTM-GFTHMDRRLHQMLFADRDYESVGLTTTDVDCPPSFRPK 253
Query: 175 VTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
+ + I EK Y+V+++R KDR KL+FDIVCTLTDM+YVVFH +++ A QE++IRH+
Sbjct: 254 IRIERIVEKGYSVVSVRCKDRAKLMFDIVCTLTDMEYVVFHATISSEGQYASQEYFIRHM 313
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
DG + +E E+ERVI+C+EAAI+RR SEG+ LELC +DRVGLLS++TRI REN L + RA
Sbjct: 314 DGCTLDTEGEKERVIKCIEAAIQRRVSEGVSLELCAKDRVGLLSEVTRILRENGLRVSRA 373
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET---- 349
+ST+G K + FYV D +GNPVD KII+++ ++IG + + K P ET
Sbjct: 374 GVSTVGEKGLNVFYVRDASGNPVDMKIIEALHKEIGQIMMVNVKRVPGYVKAPAETRGWA 433
Query: 350 TTGFFLGNFFK 360
T FF GN +
Sbjct: 434 KTSFFFGNLLE 444
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 80/179 (44%), Gaps = 25/179 (13%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V+V N D T+I S ++P +L ++V LTD+ +++ +++ F++
Sbjct: 23 PRVSVDNDSCHDCTLIKFDSINKPGILLEVVQILTDLDFIITKAYISSDGGWFMDVFHVT 82
Query: 232 HVDGLPISSEAERERVIQCLEAAI--ERRASEGLE-----------------LELCTEDR 272
G I+ + I +E + + +++EG+ +EL DR
Sbjct: 83 DQQGKKITD----SKTIDFIEKTLGPKGQSTEGVNCWQGKRVGVHSIGDHTAIELIGRDR 138
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIGH 330
GLLS+I+ + ++ AE+ T ++ YV D T + D K + + Q+ H
Sbjct: 139 PGLLSEISAVLASLQFNVIAAEVWTHNRRIACVLYVNDATNQAMDDSKRLSIMEEQLNH 197
>gi|357477003|ref|XP_003608787.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
gi|355509842|gb|AES90984.1| hypothetical protein MTR_4g101950 [Medicago truncatula]
Length = 441
Score = 329 bits (843), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 169/337 (50%), Positives = 234/337 (69%), Gaps = 14/337 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ V+ YI+Q L + + + R+ + T++E GTDR
Sbjct: 73 MDVFHVTDQNGNKLTDESVLKYIEQSLSSIYNGKTNHRNGL--------TALELKGTDRV 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLA+L C+VV A++WTHN R A++++V D TG +I+D ++++ ++ L V
Sbjct: 125 GLLSEVFAVLAELQCDVVEAKVWTHNGRTASLIYVKDSITGTSIEDSQKINRLEARLRYV 184
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN- 179
L+G D R A TS+S +++ ERRLHQ+MF DRDY+ + + S P VTV N
Sbjct: 185 LQGDSDIRSATTSISD-AVIHPERRLHQMMFADRDYQM--NPIFKF--SSETPVVTVQNW 239
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
E+ Y+V+ ++ KDR KLLFD+VC LTDM+YVVFH +NT +AY EFYIRH DG PIS
Sbjct: 240 AERGYSVVNVQCKDRVKLLFDVVCNLTDMEYVVFHATINTRVDQAYMEFYIRHKDGTPIS 299
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SE ER+RVIQCL+AA+ERR+ EG+ LELCTEDR GLL+++ R FREN L++ RA+I+T G
Sbjct: 300 SEPERQRVIQCLQAAVERRSCEGVRLELCTEDRQGLLAEVMRTFRENGLNVTRADITTTG 359
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 336
+ FY TD G P D KII+S+R++IG T L+VK
Sbjct: 360 DLAANVFYATDAIGYPADQKIIESVRQKIGLTNLKVK 396
>gi|242082077|ref|XP_002445807.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
gi|241942157|gb|EES15302.1| hypothetical protein SORBIDRAFT_07g026100 [Sorghum bicolor]
Length = 476
Score = 325 bits (834), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 187/394 (47%), Positives = 241/394 (61%), Gaps = 20/394 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHTSIEFTGT 57
MDVF+V+D DG K+ D +VID I+Q L + SF P +V E T+IE G
Sbjct: 83 MDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTIELVGR 142
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL SEV AVL DL CN+V +E+WTH+ R AA+V+VTD T AI+DP RL T+K LL
Sbjct: 143 DRPGLLSEVFAVLTDLKCNIVASEVWTHDGRVAALVYVTDADTLGAIEDPARLDTVKRLL 202
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV---EKAVGRVEDKSSR-- 172
+VLRG +KA + PG+ + RRLHQ+M DR R + VG + S
Sbjct: 203 RHVLRGSSRDKKASRAAISPGVEHAPRRLHQMMQADRTARREVGDGEGVGERGEASGAGG 262
Query: 173 --PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 229
P V V + E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V +EAYQE+Y
Sbjct: 263 GMPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYY 322
Query: 230 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 289
IRH+D S +R+R+ +CLEAAI+RR +EGL LELC EDRVGLLSD+TRIFRE+ LS
Sbjct: 323 IRHLDDSTGGSGEDRDRLCRCLEAAIQRRYTEGLRLELCCEDRVGLLSDVTRIFREHGLS 382
Query: 290 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRS------TILAP 343
+ AE+ T G + + FYV D +G PV +D++R +IG L V+ P
Sbjct: 383 VTHAEVDTRGAQAANVFYVVDASGEPVQGHAVDAVRAEIGEQFLFVREQHDAAAGAGAGP 442
Query: 344 KPPKETTTGFFLGNFFKART---FQTFKLIRSYS 374
K P LGN ++R+ LIRS S
Sbjct: 443 KSPVGGGGRRSLGNMIRSRSEKFLYNLGLIRSCS 476
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + T++ + S ++ L ++V LTD++ + +++ F++
Sbjct: 30 PRVTVDNDSDMTATLVKVDSVNKYGTLLEVVQVLTDLKLTINRAYISSDGEWFMDVFHVV 89
Query: 232 HVDGLPISSEAERERVIQCLEAAIE--RRASEGLE------------LELCTEDRVGLLS 277
DG + +R+ Q L A R E L +EL DR GLLS
Sbjct: 90 DQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTIELVGRDRPGLLS 149
Query: 278 DITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV--TGNPVDPKIIDSIRRQIGH 330
++ + + +I +E+ T G+V YVTD G DP +D+++R + H
Sbjct: 150 EVFAVLTDLKCNIVASEVWTHDGRVAALVYVTDADTLGAIEDPARLDTVKRLLRH 204
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ G L ++ ++ + L+I RA IS+ G D F+V D GN + D ++ID I + +G
Sbjct: 51 NKYGTLLEVVQVLTDLKLTINRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIEQSLG 110
Query: 330 HTKLQVK 336
L +
Sbjct: 111 AGSLSFR 117
>gi|168024574|ref|XP_001764811.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684105|gb|EDQ70510.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 448
Score = 320 bits (821), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 173/373 (46%), Positives = 239/373 (64%), Gaps = 23/373 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
DVF+V+D G K+RD+ V+D+IQ R + S A LR S G + +HT +E TG
Sbjct: 76 FDVFHVVDHSGNKVRDRSVLDHIQNSLGYRTRREQSSADLLRRSSG-LSVSDHTVVELTG 134
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ A+L L CNV AE+WTHN R A V+++TD +TG I+ RL IKE
Sbjct: 135 PDRPGLLSEISAILTQLDCNVNAAEVWTHNLRVACVIYLTDTTTGGPIQTQSRLELIKEQ 194
Query: 117 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSS--RP 173
L VLRG D A+ + I + ERRLHQ+M+DDR + G+ +SS RP
Sbjct: 195 LSKVLRGAHDENLARWKIEYATEITHVERRLHQLMYDDR------RHAGQDYSRSSEDRP 248
Query: 174 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
++ + E+ Y++++++ KDRPKLLFDIVCTLTDMQYV+ H ++N+ + QEF+IRH
Sbjct: 249 KIQIKRNERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSHEADTTQEFFIRHE 308
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRA 293
+G + + AE + +I CLEAAI RR ++GL LELC DRVGLLS++T+IFREN LS+ RA
Sbjct: 309 NGCTLETPAE-QHLIVCLEAAINRRTTKGLRLELCMNDRVGLLSEVTKIFRENGLSVARA 367
Query: 294 EISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGF 353
++ST K + FYV D +G PV+ K+++ +R+ IGH LQVK + PP+E+
Sbjct: 368 DVSTRDDKAVNVFYVLDASGRPVNMKVVEEMRKTIGHAILQVKGT------PPQESELPN 421
Query: 354 FLGNFFKA--RTF 364
NFF RTF
Sbjct: 422 PGANFFGGLYRTF 434
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 73/160 (45%), Gaps = 16/160 (10%)
Query: 173 PQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VT+ N D TV+ + S DR +L ++V LTD+ V+ + + + + F++
Sbjct: 23 PRVTIENDTSDNVTVVQVHSADRHGILLNVVQVLTDLDLVIVKSDMFSDKGWFFDVFHVV 82
Query: 232 HVDGLPISSEAERERVIQCLEAAIER--------RASEGLE------LELCTEDRVGLLS 277
G + + + + L R R S GL +EL DR GLLS
Sbjct: 83 DHSGNKVRDRSVLDHIQNSLGYRTRREQSSADLLRRSSGLSVSDHTVVELTGPDRPGLLS 142
Query: 278 DITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV 316
+I+ I + ++ AE+ T +V Y+TD TG P+
Sbjct: 143 EISAILTQLDCNVNAAEVWTHNLRVACVIYLTDTTTGGPI 182
>gi|297849610|ref|XP_002892686.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
gi|297338528|gb|EFH68945.1| hypothetical protein ARALYDRAFT_471392 [Arabidopsis lyrata subsp.
lyrata]
Length = 440
Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 181/383 (47%), Positives = 249/383 (65%), Gaps = 24/383 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ V+ YI+Q +ET + ++ + G+ T++E TGTDR
Sbjct: 73 MDVFHVTDLNGNKLNDQSVLRYIEQSIET-VYYGENIEVN-GL------TALELTGTDRI 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL+DL+C+VV+A++WTHN R A+V+++ D S+G I D +R+S I+ L NV
Sbjct: 125 GLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLRDGSSGAPILDSQRISKIEGRLKNV 184
Query: 121 LRGYDDFRKA-KTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV--TV 177
L G +D A KT +S +M+ ERRLHQ+MF+DRDYER R + + P V TV
Sbjct: 185 LNGDNDVNSAAKTCVSVDSMMHIERRLHQLMFEDRDYER------RSNKQETSPTVVVTV 238
Query: 178 LN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
N E+ Y+V+ + +DR KLLFD+VCTLTDM+Y VFH +NT +A+ EFYIRH DG
Sbjct: 239 QNWAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIRHKDGS 298
Query: 237 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
PISSEAER+RVI CLEAA+ERRA EG+ LEL D+ GLL+++TR FREN L++ R EIS
Sbjct: 299 PISSEAERQRVILCLEAAVERRALEGVRLELRHPDKQGLLAEVTRTFRENGLNVTRTEIS 358
Query: 297 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP---PKETTTGF 353
T + FYVTD G+ D K+I+S+R +IG L+VK + K ++ T
Sbjct: 359 TSSEMATNIFYVTDANGDEPDFKLIESVREKIGLECLRVKEMPTMNHKKGDGEEQQTKAV 418
Query: 354 F--LGNFFKARTFQTFKLIRSYS 374
LG+ F F LI+S S
Sbjct: 419 LVSLGSLVWRNLFN-FGLIKSCS 440
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + T++ + S R +L + V LTD+ + +++ F++
Sbjct: 20 PRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISSDGRWNMDVFHVT 79
Query: 232 HVDGLPISSEAERERVIQCLEAAI--ERRASEGL-ELELCTEDRVGLLSDITRIFRENSL 288
++G ++ ++ + Q +E E GL LEL DR+GLLS++ + + +
Sbjct: 80 DLNGNKLNDQSVLRYIEQSIETVYYGENIEVNGLTALELTGTDRIGLLSEMFAVLSDLNC 139
Query: 289 SIKRAEISTIGGKVKDTFYVTD-VTGNPVDPKIIDSIR 325
+ A++ T G+V Y+ D +G P I+DS R
Sbjct: 140 DVVDAKLWTHNGRVASVIYLRDGSSGAP----ILDSQR 173
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 328
R G+L + +I + +LSIK+A IS+ G D F+VTD+ GN + D ++ I + I
Sbjct: 42 RNGILLEAVQILTDLNLSIKKAYISSDGRWNMDVFHVTDLNGNKLNDQSVLRYIEQSI 99
>gi|15221327|ref|NP_172704.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
gi|8778647|gb|AAF79655.1|AC025416_29 F5O11.14 [Arabidopsis thaliana]
gi|22138106|gb|AAM93433.1| ACR8 [Arabidopsis thaliana]
gi|110737291|dbj|BAF00592.1| hypothetical protein [Arabidopsis thaliana]
gi|111074504|gb|ABH04625.1| At1g12420 [Arabidopsis thaliana]
gi|332190757|gb|AEE28878.1| ACT domain repeat 8 protein [Arabidopsis thaliana]
Length = 441
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/382 (47%), Positives = 248/382 (64%), Gaps = 21/382 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ V+ YI+Q +ET + ++ + G+ T++E TGTDR
Sbjct: 73 MDVFHVTDLNGNKLNDQSVLRYIEQSIET-VYYGENIEVN-GL------TALELTGTDRI 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SE+ AVL+DL+C+VV+A++WTHN R A+V+++ D +G I D R+S I+ L NV
Sbjct: 125 GLLSEMFAVLSDLNCDVVDAKLWTHNGRVASVIYLKDCISGAPILDSHRISKIEGRLKNV 184
Query: 121 LRGYDDFRKA-KTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
L G +D A KT ++ +M+ ERRLHQ+MF+DRDYER K ++S VTV N
Sbjct: 185 LNGDNDVNSAAKTCVTVDSMMHIERRLHQLMFEDRDYERRSKK----HERSPMVVVTVQN 240
Query: 180 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
E+ Y+V+ + +DR KLLFD+VCTLTDM+Y VFH +NT +A+ EFYIRH DG PI
Sbjct: 241 WAERGYSVVNVHCRDRTKLLFDVVCTLTDMEYAVFHATINTAEDQAHLEFYIRHKDGSPI 300
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SSEAER+RVIQCLEAA+ERRA EG+ LEL D+ GLL+++TR FREN L++ R EIST
Sbjct: 301 SSEAERQRVIQCLEAAVERRALEGVRLELRHPDKQGLLAEVTRTFRENGLNVTRTEISTS 360
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP----PKETTTGFF 354
+ FYVTD G+ D K+I+S+R +IG L+VK + K ++ T
Sbjct: 361 SDMATNIFYVTDANGDEPDFKLIESVREKIGLECLRVKEMPTMYHKKGDGEEQQQTKAVL 420
Query: 355 --LGNFFKARTFQTFKLIRSYS 374
LG+ F F LI+S S
Sbjct: 421 VSLGSLVWRNLFN-FGLIKSCS 441
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 9/158 (5%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + T++ + S R +L + V LTD+ + +++ T F++
Sbjct: 20 PRVVIDNGVCSSATIVKVDSSRRNGILLEAVQILTDLNLSIKKAYISSDGTWNMDVFHVT 79
Query: 232 HVDGLPISSEAERERVIQCLEAAI--ERRASEGL-ELELCTEDRVGLLSDITRIFRENSL 288
++G ++ ++ + Q +E E GL LEL DR+GLLS++ + + +
Sbjct: 80 DLNGNKLNDQSVLRYIEQSIETVYYGENIEVNGLTALELTGTDRIGLLSEMFAVLSDLNC 139
Query: 289 SIKRAEISTIGGKVKDTFYVTD-VTGNPVDPKIIDSIR 325
+ A++ T G+V Y+ D ++G P I+DS R
Sbjct: 140 DVVDAKLWTHNGRVASVIYLKDCISGAP----ILDSHR 173
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 328
R G+L + +I + +LSIK+A IS+ G D F+VTD+ GN + D ++ I + I
Sbjct: 42 RNGILLEAVQILTDLNLSIKKAYISSDGTWNMDVFHVTDLNGNKLNDQSVLRYIEQSI 99
>gi|449437402|ref|XP_004136481.1| PREDICTED: uncharacterized protein LOC101219701 [Cucumis sativus]
gi|449525060|ref|XP_004169538.1| PREDICTED: uncharacterized LOC101219701 [Cucumis sativus]
Length = 469
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 247/392 (63%), Gaps = 22/392 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP------TEEHTSIEF 54
MDVF+V D + K+ D++VI+ IQQ + T S ++ V + EHT+IE
Sbjct: 78 MDVFHVKDENSHKLTDQKVINSIQQAIGTTKGPDNSAKTRRYVNKLLNSDNSGEHTAIEM 137
Query: 55 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 114
TGTDRPGLFSE+ A LADLHCNVV A W+HN R A + +++D ST I+DP RL+ I+
Sbjct: 138 TGTDRPGLFSEISAALADLHCNVVEAHAWSHNARLACIAYISDQSTDSPIEDPHRLANIE 197
Query: 115 ELLFNVLRG--------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 166
E L VLR + + + +S N ERRLHQ++ +DY+ +++ R
Sbjct: 198 EHLSTVLRAATAPPIASWTHTLQQEVKISATITTNVERRLHQLLVSVKDYDWTSESISRR 257
Query: 167 EDKSSRPQVTVLNIE----KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
+ + T ++IE K Y+++++ KDRP+L+FD VCTLTDMQYV+FH +++ +
Sbjct: 258 PKRKEEWRKTTVSIESCDQKGYSIVSIECKDRPRLMFDTVCTLTDMQYVIFHASISSKKD 317
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRI 282
A+QE++IRHV+G ++S+ ++ RV++CLEAAIERR EG+ LELC +RVGLLSDITR+
Sbjct: 318 NAFQEYFIRHVNGYALNSDYDKHRVVKCLEAAIERRVCEGVRLELCANNRVGLLSDITRV 377
Query: 283 FRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILA 342
REN L++ RA+I+T G K + FYV D++G VD ++++S++++IG L+VK T
Sbjct: 378 LRENGLNVVRADIATQGEKAINAFYVKDISGKEVDMEMVESVKKEIGPVVLRVKNET-SP 436
Query: 343 PKPPKETTTGFFLGNFFKA---RTFQTFKLIR 371
P P+ T + F + K+ R F IR
Sbjct: 437 PSTPQITRSRFSFSDMLKSQLERLSHNFIAIR 468
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ GLL ++ +I + +LSI ++ IS G D F+V D + + D K+I+SI++ IG
Sbjct: 46 NKQGLLLEVVQILTDLNLSISKSYISCDAGWFMDVFHVKDENSHKLTDQKVINSIQQAIG 105
Query: 330 HTK 332
TK
Sbjct: 106 TTK 108
>gi|168033466|ref|XP_001769236.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679501|gb|EDQ65948.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 446
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 173/365 (47%), Positives = 231/365 (63%), Gaps = 15/365 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQ----RLETDASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVF+V+D +G K DK+ D+I R + A SLR S G + +HT IE TG
Sbjct: 76 MDVFHVVDSNGNKALDKQTCDHIMNSLGYRTRREQFSADSLRRSTG-LTVADHTVIELTG 134
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVL L CNV AE+WTHN RAA++V+ TD STG I + +L IKE
Sbjct: 135 PDRPGLLSELSAVLTRLECNVNAAEVWTHNLRAASIVYFTDSSTGRPITNQSKLDYIKEQ 194
Query: 117 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L V++G D A+ + I + ERRLHQ+M+DDR E R + RP +
Sbjct: 195 LSRVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRANE----VPDRSGNMQGRPAI 250
Query: 176 TVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
+ E+ Y+V+++ KDRPKLLFDIVCTLTDMQYV++H ++N +E QEF+IRHV+G
Sbjct: 251 HIKRNERGYSVVSIHCKDRPKLLFDIVCTLTDMQYVIYHALINFPGSETSQEFFIRHVNG 310
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
+ + AE + + CLEAAI RR SEGL LELC DRVGLLSD+TRIFREN LS+ RA+I
Sbjct: 311 CTLDTAAE-QHLKACLEAAISRRTSEGLRLELCMNDRVGLLSDVTRIFRENGLSVARADI 369
Query: 296 STIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFL 355
+T K + FYV D +G PV+ K+++++R IG + L+VK L P+ +T L
Sbjct: 370 TTRHDKAINVFYVVDASGRPVNMKVVEAMRETIG-SSLEVKG---LPRSEPELPSTKLSL 425
Query: 356 GNFFK 360
G F+
Sbjct: 426 GGLFR 430
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 29/179 (16%)
Query: 173 PQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV-----VFHGM---------V 217
P+VTV ++ T++ + S +R +L ++V LTD+ +FH + V
Sbjct: 23 PRVTVETEASENATIVKVNSANRHGILLNVVQVLTDLDLTITKSDIFHDLGWFMDVFHVV 82
Query: 218 NTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE------LELCTED 271
++ +A + H+ ++S R R Q +A R S GL +EL D
Sbjct: 83 DSNGNKALDKQTCDHI----MNSLGYRTRREQF--SADSLRRSTGLTVADHTVIELTGPD 136
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRRQI 328
R GLLS+++ + ++ AE+ T + Y TD TG P+ + +D I+ Q+
Sbjct: 137 RPGLLSELSAVLTRLECNVNAAEVWTHNLRAASIVYFTDSSTGRPITNQSKLDYIKEQL 195
>gi|326515010|dbj|BAJ99866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 458
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 178/383 (46%), Positives = 243/383 (63%), Gaps = 11/383 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVGVMPTEE--HTSIEFTGT 57
MDVF+V+D +G K+ D +VID I+Q L + SF + R VGV E T IE G
Sbjct: 78 MDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRGTDRC-VGVEAEAEAAQTVIELIGR 136
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL SEV AVL +L CN+ +E+WTH+ R AA+++VTD TG +I++P+RL T+K LL
Sbjct: 137 DRPGLLSEVFAVLTNLKCNIAASEVWTHDGRMAALMYVTDAETGGSIEEPERLDTVKRLL 196
Query: 118 FNVLRGYDDFRKAKTSLSPPGIM--NRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
+VLRG +KA + + +RRLHQ+M DR R + +D+S P V
Sbjct: 197 RHVLRGSSRDKKAARAAISARAAAPHAQRRLHQMMHADRGVHRADGDDAVADDRSL-PVV 255
Query: 176 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
V + E+ YT++ +R +DRPKLLFD VCTLTDMQY+VFHG V +EAYQE+YIRH+D
Sbjct: 256 VVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYLVFHGTVIAEGSEAYQEYYIRHLD 315
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
+S+ +RE++ +CLEAAI+RR +EGL LELC EDRVGLLSD+TRIFRE+ LS+ AE
Sbjct: 316 DGAAASDEDREQLRRCLEAAIQRRNTEGLGLELCCEDRVGLLSDVTRIFREHGLSVTHAE 375
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFF 354
++T G + + FYV +G PV + ++++R +IG L VK P G
Sbjct: 376 VATRGERAANVFYVVTASGMPVQAQAVEAVRAEIGDEILLVKEDAAAPKSPLGRDGGGRS 435
Query: 355 LGNFFKART---FQTFKLIRSYS 374
LGN ++R+ LIRS S
Sbjct: 436 LGNMIRSRSEKFLYNLGLIRSCS 458
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 86/174 (49%), Gaps = 16/174 (9%)
Query: 173 PQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + T++ + S ++ L ++V LTD++ + +++ F++
Sbjct: 25 PRVTVDNTSDMTATLVKVDSANKYGTLLEVVQVLTDLKLAINRAYISSDGEWFMDVFHVV 84
Query: 232 HVDGLPISSEAERERVIQCLEA-AIERRASE---GLE---------LELCTEDRVGLLSD 278
+G + +R+ Q L A ++ R ++ G+E +EL DR GLLS+
Sbjct: 85 DEEGNKLYDGQVIDRIEQSLGAGSLSFRGTDRCVGVEAEAEAAQTVIELIGRDRPGLLSE 144
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPV-DPKIIDSIRRQIGH 330
+ + +I +E+ T G++ YVTD TG + +P+ +D+++R + H
Sbjct: 145 VFAVLTNLKCNIAASEVWTHDGRMAALMYVTDAETGGSIEEPERLDTVKRLLRH 198
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G L ++ ++ + L+I RA IS+ G D F+V D GN + D ++ID I +
Sbjct: 44 SANKYGTLLEVVQVLTDLKLAINRAYISSDGEWFMDVFHVVDEEGNKLYDGQVIDRIEQS 103
Query: 328 IGHTKLQVK 336
+G L +
Sbjct: 104 LGAGSLSFR 112
>gi|168045560|ref|XP_001775245.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162673458|gb|EDQ59981.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 454
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/368 (44%), Positives = 238/368 (64%), Gaps = 17/368 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMPTEEHTSIE 53
+DVF+V+D G K+RD+ V+DYIQ+ + + S A LR S G + T +HT +E
Sbjct: 76 LDVFHVVDDSGNKVRDQSVLDYIQKVCGGHSIPTQLEQSSADLLRRSSG-LTTADHTVVE 134
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
TG DRPGL SE+ AVL + CNV AE+WTHN R A V++ T+ +TG I+ L I
Sbjct: 135 LTGPDRPGLLSEISAVLTSMECNVNAAEVWTHNHRVACVIYFTNTNTGGPIESQSLLELI 194
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPG-IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR 172
KE L VL+G D + A+ + I + ERRLHQ+M++DR + E+ R + R
Sbjct: 195 KEQLSRVLKGDHDEQHARCKIEYASEITHVERRLHQLMYEDRLHG--EQDCDR--NSQGR 250
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 232
P++ + E+ Y++++++ KDRPKLLFDIVCTLTDMQYV+ H ++N+ E QEF+IRH
Sbjct: 251 PKIQIKKSERGYSMVSIQCKDRPKLLFDIVCTLTDMQYVIHHALINSPGPETTQEFFIRH 310
Query: 233 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 292
+G + + AE+ + CLEAAI RR +EGL LELC DRVGLLSD+T+IFREN LS+ R
Sbjct: 311 ENGCVLDTAAEQHLKV-CLEAAINRRTTEGLRLELCMNDRVGLLSDVTKIFRENGLSVAR 369
Query: 293 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTG 352
A+++T K + FYV D +G VD K+++++R+ IGH LQVK + + P+ +++
Sbjct: 370 ADVTTRDDKAVNVFYVVDASGCTVDMKVVEAMRKSIGHAILQVKG---VPRQEPELSSSK 426
Query: 353 FFLGNFFK 360
LG F+
Sbjct: 427 LSLGGLFR 434
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 89/183 (48%), Gaps = 34/183 (18%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV---------------VFHGM 216
P+VT+ N ++ TV+ + S +R +L ++V LTD+ V VFH +
Sbjct: 23 PRVTIENEAYENATVVQVHSANRHGILLNVVQVLTDLDLVITKSDMFSDGGWFLDVFHVV 82
Query: 217 VNTG---RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE------LEL 267
++G R ++ ++ + G I ++ E+ A + RR+S GL +EL
Sbjct: 83 DDSGNKVRDQSVLDYIQKVCGGHSIPTQLEQS------SADLLRRSS-GLTTADHTVVEL 135
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPVDPK-IIDSIR 325
DR GLLS+I+ + ++ AE+ T +V Y T+ TG P++ + +++ I+
Sbjct: 136 TGPDRPGLLSEISAVLTSMECNVNAAEVWTHNHRVACVIYFTNTNTGGPIESQSLLELIK 195
Query: 326 RQI 328
Q+
Sbjct: 196 EQL 198
>gi|359496882|ref|XP_002265013.2| PREDICTED: uncharacterized protein LOC100264704 [Vitis vinifera]
gi|296085715|emb|CBI29515.3| unnamed protein product [Vitis vinifera]
Length = 468
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/381 (44%), Positives = 243/381 (63%), Gaps = 25/381 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVG--VMP---TEEHTSIE 53
MDVF+V D G K+ D+ +I YIQQ L + + L++ +G + P + EHT+ E
Sbjct: 76 MDVFHVTDQLGNKLTDESLILYIQQALCANRKQGISKELQARLGREMNPRHVSTEHTAFE 135
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
TGTDRPGL SE+ AVLA+L C+V A WTHN R A ++ + D G I+DP+RL+ +
Sbjct: 136 ITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPERLAHV 195
Query: 114 KELLFNVLRG-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 170
+E L NV+ + + K L+ P G + +RRLHQ+MF D+DYER G + S
Sbjct: 196 EEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER---CCGGCDGSS 252
Query: 171 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 229
R QV++ N EK Y+V+ ++S+DRPKLLFD VCTLTDMQYVVFH V++ + A QE++
Sbjct: 253 DRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYF 312
Query: 230 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLS 289
IR +DG + +++ER RV QCL AAIERR + GL L++ ++R+GLLSDITR+FREN LS
Sbjct: 313 IRQMDGCTLGTQSERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGLS 372
Query: 290 IKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTI---LAPKPP 346
I+ AEI G + +FYVTDV+G V P ++ IR++IG T + V +S++ L P
Sbjct: 373 IRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLPASPS 432
Query: 347 KETTTG--------FFLGNFF 359
++ +T F LG +
Sbjct: 433 RDRSTASSVENRPRFSLGTLW 453
>gi|218201514|gb|EEC83941.1| hypothetical protein OsI_30028 [Oryza sativa Indica Group]
Length = 467
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 183/393 (46%), Positives = 241/393 (61%), Gaps = 21/393 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMPTEE-HTSIEFTGT 57
MDVF+V+D DG K+ D +VID I+ L + SF AP RS T+IE G
Sbjct: 77 MDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQTAIELIGK 136
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL SEV AVL DL CN+V++E+WTH+ R AA+VHVTD T AI D RL T+K LL
Sbjct: 137 DRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQDRLDTVKRLL 196
Query: 118 FNVLRG-----YDDFRKAKTSLSPP----GIMNRERRLHQIMFDDRDYERVE-KAVGRVE 167
++LRG D A+ + P + RRLHQ+M DDR + +
Sbjct: 197 RHLLRGGGAGARDRKDTARADIPAPRRDGAAAHAPRRLHQMMHDDRAAAAPQPSSSSGDG 256
Query: 168 DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
RP V V++ E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V +EAYQ
Sbjct: 257 GGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQ 316
Query: 227 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 286
E+YIRH+D P++S ER+R+ +CLEAAI+RR +EGL LELC EDRVGLLSD+TRIFRE+
Sbjct: 317 EYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELCCEDRVGLLSDVTRIFREH 376
Query: 287 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILA-PK- 344
LS+ AE++T G + + FYV +G PV+ ++++R +IG L V+ P+
Sbjct: 377 GLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIGEQVLFVREDAGGGEPRS 436
Query: 345 PPKETTTGFFLGNFFKART---FQTFKLIRSYS 374
PP LGN ++R+ LIRS S
Sbjct: 437 PPGRDRRS--LGNMIRSRSEKFLYNLGLIRSCS 467
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G L ++ ++ E L+IKRA IS+ G D F+V D GN + D ++ID I
Sbjct: 43 SANKYGTLLEVVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIELS 102
Query: 328 IGHTKLQVK 336
+G L +
Sbjct: 103 LGAGSLSFR 111
>gi|255548868|ref|XP_002515490.1| amino acid binding protein, putative [Ricinus communis]
gi|223545434|gb|EEF46939.1| amino acid binding protein, putative [Ricinus communis]
Length = 478
Score = 310 bits (793), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 166/393 (42%), Positives = 245/393 (62%), Gaps = 35/393 (8%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVGVM----PTEEHTSI 52
MDVF+V D GKK+ D+ VIDYI Q + ET + P +S V + + EHT+I
Sbjct: 78 MDVFHVKDERGKKLTDQHVIDYIHQAIGTTRETQSPATP--KSYVNDVFEGEHSSEHTAI 135
Query: 53 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 112
E +GTDRPGLFSE+ A L DLHCN+V A W+HN R A V +++D ST I DP RL+T
Sbjct: 136 EMSGTDRPGLFSEISAALVDLHCNIVEAHAWSHNARLACVAYISDQSTDTPIDDPHRLAT 195
Query: 113 IKELLFNVLRG------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE--------- 157
I++ L V+R + + + N ERRLHQ+M RD++
Sbjct: 196 IEDHLTTVIRATGPQPNSQEVKTGGVVGGEGTVTNVERRLHQLMLSARDFDGPLGSSITG 255
Query: 158 ---RVEKAVGRVEDKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQY 210
R + G D + TV++I EK Y+++++ KDRP+L+FD VCTLTDMQY
Sbjct: 256 SGPRSGRGSGSGLDNEDEGRKTVVSIDNCEEKGYSIVSIECKDRPRLMFDTVCTLTDMQY 315
Query: 211 VVFHGMVNTGRTE-AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCT 269
V+FH + G A+QE++IR++DG +++E+E+ERVI+CLEAAIERR EG+++ELC
Sbjct: 316 VIFHASIGAGDDGYAFQEYFIRYIDGYALNTESEKERVIKCLEAAIERRVCEGVKVELCA 375
Query: 270 EDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 329
E+RVGLLSDITR+ REN L++ RA+++T G K + FYV D++GN VD + S+++++G
Sbjct: 376 ENRVGLLSDITRVLRENGLTVVRADVATQGEKAVNAFYVRDISGNEVDMGFVKSMKKEMG 435
Query: 330 HTKLQVKRSTILAPKPPKETTTGFFLGNFFKAR 362
L+VK+ ++ ++ F +G+ K++
Sbjct: 436 AINLEVKKD--ISRPISRDQRARFSIGDMLKSQ 466
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ GLL ++ ++ + +L+I ++ IS+ G D F+V D G + D +ID I + IG
Sbjct: 46 NKQGLLLEVVQVLTDLNLTISKSYISSDAGWFMDVFHVKDERGKKLTDQHVIDYIHQAIG 105
Query: 330 HTKLQVKRSTILAPKPPKETTTGFFLG 356
T+ +P PK F G
Sbjct: 106 TTR------ETQSPATPKSYVNDVFEG 126
>gi|357487955|ref|XP_003614265.1| ACR4 [Medicago truncatula]
gi|355515600|gb|AES97223.1| ACR4 [Medicago truncatula]
Length = 362
Score = 309 bits (791), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 160/283 (56%), Positives = 205/283 (72%), Gaps = 7/283 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ ++DYI++ L ++ FA ++RS VGV T +HT+IE G+DRP
Sbjct: 84 MDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRS-VGVKQTPDHTAIELMGSDRP 142
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS IKELL NV
Sbjct: 143 GLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKELLCNV 202
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L G + R AKT ++ + +RRLHQ+MFDDRDYERV+ D+ RP V V+N
Sbjct: 203 LGGGNRKRGAKTVVTDDST-HTDRRLHQMMFDDRDYERVDDDDF---DEKQRPNVDVVNW 258
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+KDY+V+T+ +DRPKL+FD VCTLTDMQYVVFH ++ +AYQE+YI+H+DG P+
Sbjct: 259 SDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQEYYIKHIDGSPVK 318
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRI 282
S+AER+RVI CLEAAIERR SE +L L D + + S RI
Sbjct: 319 SDAERQRVIHCLEAAIERRVSEVRDLMLVLSD-ISIASKFGRI 360
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ +I + +L I +A IS+ GG D F VTD GN V D I+D IR+
Sbjct: 50 SANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKS 109
Query: 328 IG 329
+G
Sbjct: 110 LG 111
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N ++ TVI + S ++ +L ++V LTD+ ++ +++ F +
Sbjct: 31 PRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVT 90
Query: 232 HVDGLPISSEAERERVIQ------CLEAAIE----RRASEGLELELCTEDRVGLLSDITR 281
DG ++ E + + + C + ++ + +EL DR GLLS+++
Sbjct: 91 DQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMGSDRPGLLSEVSA 150
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVTD 310
+ +I AE+ T + +VTD
Sbjct: 151 VLTNLKCNIVNAEVWTHNMRAAAVMHVTD 179
>gi|297799732|ref|XP_002867750.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
gi|297313586|gb|EFH44009.1| hypothetical protein ARALYDRAFT_492590 [Arabidopsis lyrata subsp.
lyrata]
Length = 449
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 227/342 (66%), Gaps = 24/342 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E TGTDR
Sbjct: 73 MDVFHVSDLNGNKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELTGTDRV 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DPKRLSTIKELLFN 119
GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++ L N
Sbjct: 125 GLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVEGQLRN 184
Query: 120 VLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKSSRPQV 175
+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK+ P V
Sbjct: 185 LLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS----------PIV 234
Query: 176 TVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T A+ EFY+RH D
Sbjct: 235 SVQNLPKRGYSVVNLQCKDRLKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHSD 294
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G P+SSE ER+R+IQCL+AAIERR +G+ LELCT DR GLL+++TR+ REN L+I RAE
Sbjct: 295 GHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRVLRENGLNIARAE 354
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 336
IST G ++ FYVTD GN +DP+II SIR +IG L VK
Sbjct: 355 ISTKDGVARNVFYVTDANGNLIDPEIIQSIREKIGIDDLSVK 396
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + + TV+ + S P +L + V LTDM + +++ F++
Sbjct: 20 PRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISSDGKWNMDVFHVS 79
Query: 232 HVDGLPISSEAERERVIQCLEAAIERR---ASEGL----ELELCTEDRVGLLSDITRIFR 284
++G ++ E +I+ +E +IE +EG LEL DRVGLLS++ +
Sbjct: 80 DLNGNKLTD----ENLIRYIEKSIETSHYCKTEGYTGLTALELTGTDRVGLLSEVFAVLA 135
Query: 285 ENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPVD 317
+ + A+ T G++ YV D +G P+D
Sbjct: 136 DLECDVVEAKAWTHNGRIASMIYVKDGNSGTPID 169
>gi|115477499|ref|NP_001062345.1| Os08g0533300 [Oryza sativa Japonica Group]
gi|113624314|dbj|BAF24259.1| Os08g0533300 [Oryza sativa Japonica Group]
Length = 498
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 182/393 (46%), Positives = 241/393 (61%), Gaps = 21/393 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMPTEE-HTSIEFTGT 57
MDVF+V+D DG K+ D +VID I+ L + SF AP RS T+IE G
Sbjct: 108 MDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQTAIELIGK 167
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL SEV AVL DL CN+V++E+WTH+ R AA+VHVTD T AI D RL T+K LL
Sbjct: 168 DRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQDRLDTVKRLL 227
Query: 118 FNVLRG-----YDDFRKAKTSLSPP----GIMNRERRLHQIMFDDRDYERVE-KAVGRVE 167
++LRG D A+ ++ P + RRLHQ+M DDR + +
Sbjct: 228 RHLLRGGGAGARDRKATARAAIPAPRRDGAAAHAPRRLHQMMHDDRAAAAPQPSSSSGDG 287
Query: 168 DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
RP V V++ E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V +EAYQ
Sbjct: 288 GGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQ 347
Query: 227 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 286
E+YIRH+D P++S ER+R+ +CLEAAI+RR +EGL LEL EDRVGLLSD+TRIFRE+
Sbjct: 348 EYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREH 407
Query: 287 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILA-PK- 344
LS+ AE++T G + + FYV +G PV+ ++++R +IG L V+ P+
Sbjct: 408 GLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIGEQVLFVREDAGGGEPRS 467
Query: 345 PPKETTTGFFLGNFFKART---FQTFKLIRSYS 374
PP LGN ++R+ LIRS S
Sbjct: 468 PPGRDRRS--LGNMIRSRSEKFLYNLGLIRSCS 498
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 266 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSI 324
E+ + ++ G L ++ ++ E L+IKRA IS+ G D F+V D GN + D ++ID I
Sbjct: 71 EVDSANKYGTLLEVVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRI 130
Query: 325 RRQIGHTKLQVK 336
+G L +
Sbjct: 131 ELSLGAGSLSFR 142
>gi|42761392|dbj|BAD11660.1| uridylyl transferase-like [Oryza sativa Japonica Group]
Length = 475
Score = 307 bits (786), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 182/393 (46%), Positives = 241/393 (61%), Gaps = 21/393 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMPTEE-HTSIEFTGT 57
MDVF+V+D DG K+ D +VID I+ L + SF AP RS T+IE G
Sbjct: 85 MDVFHVVDQDGNKLYDGQVIDRIELSLGAGSLSFRAPPERSVEVEAEAAAAQTAIELIGK 144
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL SEV AVL DL CN+V++E+WTH+ R AA+VHVTD T AI D RL T+K LL
Sbjct: 145 DRPGLLSEVFAVLTDLKCNIVSSEVWTHDARMAALVHVTDADTLGAIDDQDRLDTVKRLL 204
Query: 118 FNVLRG-----YDDFRKAKTSLSPP----GIMNRERRLHQIMFDDRDYERVE-KAVGRVE 167
++LRG D A+ ++ P + RRLHQ+M DDR + +
Sbjct: 205 RHLLRGGGAGARDRKATARAAIPAPRRDGAAAHAPRRLHQMMHDDRAAAAPQPSSSSGDG 264
Query: 168 DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
RP V V++ E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V +EAYQ
Sbjct: 265 GGRGRPVVEVVDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQ 324
Query: 227 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 286
E+YIRH+D P++S ER+R+ +CLEAAI+RR +EGL LEL EDRVGLLSD+TRIFRE+
Sbjct: 325 EYYIRHLDDSPVTSGDERDRLGRCLEAAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREH 384
Query: 287 SLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILA-PK- 344
LS+ AE++T G + + FYV +G PV+ ++++R +IG L V+ P+
Sbjct: 385 GLSVTHAEVATRGARAANVFYVVAASGEPVEAHAVEAVRAEIGEQVLFVREDAGGGEPRS 444
Query: 345 PPKETTTGFFLGNFFKART---FQTFKLIRSYS 374
PP LGN ++R+ LIRS S
Sbjct: 445 PPGRDRRS--LGNMIRSRSEKFLYNLGLIRSCS 475
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G L ++ ++ E L+IKRA IS+ G D F+V D GN + D ++ID I
Sbjct: 51 SANKYGTLLEVVQVLTELKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIELS 110
Query: 328 IGHTKLQVK 336
+G L +
Sbjct: 111 LGAGSLSFR 119
>gi|293332811|ref|NP_001169709.1| hypothetical protein [Zea mays]
gi|224031079|gb|ACN34615.1| unknown [Zea mays]
gi|413921674|gb|AFW61606.1| hypothetical protein ZEAMMB73_976911 [Zea mays]
Length = 473
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 188/397 (47%), Positives = 242/397 (60%), Gaps = 26/397 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHTSIEFTGT 57
MDVF+V+D DG K+ D +VID I+Q L + SF P +V E T+IE G
Sbjct: 80 MDVFHVVDQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTIELVGR 139
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI DP RL T+K LL
Sbjct: 140 DRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIDDPARLDTVKRLL 199
Query: 118 FNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE--------- 167
+VLRG D + A+ ++S + + RRLHQ+M DR R G E
Sbjct: 200 RHVLRGSSRDKKAARAAVSSARVEHAPRRLHQMMQADRSARREGGGDGDGEEERERGEAS 259
Query: 168 -DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
+ + P V V + E+ YT++ +R +DRPKLLFD VCTLTDMQYVVFHG V +EAY
Sbjct: 260 GNGNGVPVVAVEDCAERGYTLVNVRCRDRPKLLFDTVCTLTDMQYVVFHGTVIAEGSEAY 319
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRE 285
QE+YIRH+D SS +R+R+ + LEAAI+RR +EGL LELC EDRVGLLSD+TRIFRE
Sbjct: 320 QEYYIRHLDD---SSGEDRDRLCRGLEAAIQRRCTEGLRLELCCEDRVGLLSDVTRIFRE 376
Query: 286 NSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK-IIDSIRRQIGHTKLQVKRS----TI 340
+ LS+ AE+ T G + + FYV D +G PV + +D++R +IG L + R
Sbjct: 377 HGLSVTHAEVETRGARAANVFYVVDASGEPVQAQAAVDAVRAEIGEQVLLLVREQQQDAA 436
Query: 341 LAPKPPKETTTGFFLGNFFKART---FQTFKLIRSYS 374
PK P LGN ++R+ LIRS S
Sbjct: 437 GGPKSPAGAGGRRSLGNMIRSRSEKFLYNLGLIRSCS 473
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 17/175 (9%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + T++ + S ++ L ++V LTD++ + +++ F++
Sbjct: 27 PRVTVDNDSDMTATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYISSDGEWFMDVFHVV 86
Query: 232 HVDGLPISSEAERERVIQCLEAAIE--RRASEGLE------------LELCTEDRVGLLS 277
DG + +R+ Q L A R E L +EL DR GLLS
Sbjct: 87 DQDGNKLYDGQVIDRIEQSLGAGSLSFRGPPERLVAVEAEAEEAQTTIELVGRDRPGLLS 146
Query: 278 DITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV--TGNPVDPKIIDSIRRQIGH 330
++ + + ++ +E+ T G+V +VTD G DP +D+++R + H
Sbjct: 147 EVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIDDPARLDTVKRLLRH 201
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G L ++ ++ + L+I RA IS+ G D F+V D GN + D ++ID I +
Sbjct: 46 SANKYGTLLEVVQVLTDLKLTINRAYISSDGEWFMDVFHVVDQDGNKLYDGQVIDRIEQS 105
Query: 328 IGHTKLQVK 336
+G L +
Sbjct: 106 LGAGSLSFR 114
>gi|22328873|ref|NP_194009.2| ACT domain repeat 7 protein [Arabidopsis thaliana]
gi|22138104|gb|AAM93432.1| ACR7 [Arabidopsis thaliana]
gi|115646767|gb|ABJ17111.1| At4g22780 [Arabidopsis thaliana]
gi|332659257|gb|AEE84657.1| ACT domain repeat 7 protein [Arabidopsis thaliana]
Length = 449
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 24/342 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E TGTDR
Sbjct: 73 MDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELTGTDRV 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DPKRLSTIKELLFN 119
GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++ L N
Sbjct: 125 GLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVEGQLRN 184
Query: 120 VLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKSSRPQV 175
+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK+ P V
Sbjct: 185 LLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS----------PIV 234
Query: 176 TVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T A+ EFY+RH D
Sbjct: 235 SVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHSD 294
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G P+SSE ER+R+IQCL+AAIERR +G+ LELCT DR GLL+++TRI REN L+I RAE
Sbjct: 295 GHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARAE 354
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 336
IST ++ FYVTD GN +DP+II SIR +IG L VK
Sbjct: 355 ISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 396
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + + TV+ + S P +L + V LTDM + +++ F++
Sbjct: 20 PRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISSDGKWNMDVFHVS 79
Query: 232 HVDGLPISSEAERERVIQCLEAAIERR---ASEGL----ELELCTEDRVGLLSDITRIFR 284
++G ++ E +I+ +E +IE +EG LEL DRVGLLS++ +
Sbjct: 80 DLNGDKLTD----ENLIRYIEKSIETSHYCKTEGYTGLTALELTGTDRVGLLSEVFAVLA 135
Query: 285 ENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPVD 317
+ + A+ T G++ YV D +G P+D
Sbjct: 136 DLECDVVEAKAWTHNGRIASMIYVKDGNSGTPID 169
>gi|20466646|gb|AAM20640.1| translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 449
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 24/342 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E TGTDR
Sbjct: 73 MDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELTGTDRV 124
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DPKRLSTIKELLFN 119
GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++ L N
Sbjct: 125 GLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVEGQLRN 184
Query: 120 VLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKSSRPQV 175
+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK+ P V
Sbjct: 185 LLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS----------PIV 234
Query: 176 TVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T A+ EFY+RH D
Sbjct: 235 SVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHSD 294
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G P+SSE ER+R+IQCL+AAIERR +G+ LELCT DR GLL+++TRI REN L+I RAE
Sbjct: 295 GHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARAE 354
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 336
IST ++ FYVTD GN +DP+II SIR +IG L VK
Sbjct: 355 ISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 396
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + + TV+ + S P +L + V LTDM + +++ F++
Sbjct: 20 PRVVIDNGVCPNSTVVKIDSARSPGILLESVQLLTDMNLWIKKAYISSDGKWNMDVFHVS 79
Query: 232 HVDGLPISSEAERERVIQCLEAAIERR---ASEGL----ELELCTEDRVGLLSDITRIFR 284
++G ++ E +I+ +E +IE +EG LEL DRVGLLS++ +
Sbjct: 80 DLNGDKLTD----ENLIRYIEKSIETSHYCKTEGYTGLTALELTGTDRVGLLSEVFAVLA 135
Query: 285 ENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPVD 317
+ + A+ T G++ YV D +G P+D
Sbjct: 136 DLECDVVEAKAWTHNGRIASMIYVKDGNSGTPID 169
>gi|2827555|emb|CAA16563.1| Translation factor EF-1 alpha - like protein [Arabidopsis thaliana]
gi|7269125|emb|CAB79233.1| Translation factor EF-1 alpha-like protein [Arabidopsis thaliana]
Length = 458
Score = 304 bits (779), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 226/342 (66%), Gaps = 24/342 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D +G K+ D+ +I YI++ +ET S G+ T++E TGTDR
Sbjct: 82 MDVFHVSDLNGDKLTDENLIRYIEKSIET--SHYCKTEGYTGL------TALELTGTDRV 133
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DPKRLSTIKELLFN 119
GL SEV AVLADL C+VV A+ WTHN R A++++V D ++G I D R+ ++ L N
Sbjct: 134 GLLSEVFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPIDGDSDRVQRVEGQLRN 193
Query: 120 VLRGYDDFRK-AKTSLSPPGIMNRERRLHQIMFDDRDYER---VEKAVGRVEDKSSRPQV 175
+L+ D ++ +T +S G + ERRLHQ MF DRDYE+ +EK+ P V
Sbjct: 194 LLKADDGYQNDTRTCVSYGGNTHMERRLHQRMFMDRDYEKKFDIEKS----------PIV 243
Query: 176 TVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
+V N+ K Y+V+ ++ KDR KLLFD+VCTLTDM Y+VFH + T A+ EFY+RH D
Sbjct: 244 SVQNLPKRGYSVVNLQCKDRMKLLFDVVCTLTDMAYIVFHAAIRTVGETAFLEFYVRHSD 303
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G P+SSE ER+R+IQCL+AAIERR +G+ LELCT DR GLL+++TRI REN L+I RAE
Sbjct: 304 GHPVSSEPERQRLIQCLQAAIERRTVKGVRLELCTADRPGLLAEVTRILRENGLNIARAE 363
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK 336
IST ++ FYVTD GN +DP+II SIR +IG L VK
Sbjct: 364 ISTKDSIARNVFYVTDANGNLIDPEIIKSIREKIGIDDLSVK 405
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 12/160 (7%)
Query: 166 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
V D P TV+ + ++ S P +L + V LTDM + +++
Sbjct: 23 VIDNGVCPNSTVVKVFTLTQPSSIDSARSPGILLESVQLLTDMNLWIKKAYISSDGKWNM 82
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERR---ASEGL----ELELCTEDRVGLLSD 278
F++ ++G ++ E +I+ +E +IE +EG LEL DRVGLLS+
Sbjct: 83 DVFHVSDLNGDKLTD----ENLIRYIEKSIETSHYCKTEGYTGLTALELTGTDRVGLLSE 138
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPVD 317
+ + + + A+ T G++ YV D +G P+D
Sbjct: 139 VFAVLADLECDVVEAKAWTHNGRIASMIYVKDGNSGTPID 178
>gi|168012723|ref|XP_001759051.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689750|gb|EDQ76120.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 447
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 164/366 (44%), Positives = 231/366 (63%), Gaps = 16/366 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLET----DASFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVF+V+D +G K DK D+I + T A+ LR S G + EHT IE TG
Sbjct: 76 MDVFHVVDSNGNKTLDKRTCDHILKVRHTLPHSSAAAIYHLRRSTG-LTCSEHTVIELTG 134
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVL L CNV AE+WTHN R A++++ D +TG I +L I+
Sbjct: 135 PDRPGLLSEISAVLTRLECNVNGAEVWTHNQRVASIIYFNDINTGRPITAQSKLDHIRGQ 194
Query: 117 LFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L V++G D A+ + I + ERRLHQ+M+DDR E V G + RP +
Sbjct: 195 LSKVMKGDHDEEVARCKIEYATEITHVERRLHQLMYDDRVNE-VPHVSG---NPQQRPVI 250
Query: 176 TVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
+ E+ Y+V++++ KDR KLLFDIVCTLTDMQYV++H ++N+ E QEF+IRHV+G
Sbjct: 251 QIKRNERGYSVVSIQCKDRSKLLFDIVCTLTDMQYVIYHALINSPGPETSQEFFIRHVNG 310
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
+ + A+ E + CLEAAI RR SEGL LELC DR+GLLSD+TR+FREN LS+ RA+I
Sbjct: 311 CTLDT-ADAEHLKVCLEAAINRRTSEGLRLELCMSDRIGLLSDVTRLFRENGLSVARADI 369
Query: 296 STIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKP-PKETTTGFF 354
+T K + FYV D +G+PV+ +++++R+ +GH+ L+VK P+P P+ ++
Sbjct: 370 TTRDDKAVNVFYVVDASGSPVNMNVVETMRKSLGHSILEVKG----LPRPEPELPSSKLS 425
Query: 355 LGNFFK 360
LG F+
Sbjct: 426 LGGLFR 431
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 78/179 (43%), Gaps = 29/179 (16%)
Query: 173 PQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV---------------VFHGM 216
P+VTV ++ TV+ + S +R +L ++V LTD+ VFH +
Sbjct: 23 PKVTVETEANENATVVKVYSANRHGILLNVVQVLTDLDLTITKSDIFHDLGWFMDVFHVV 82
Query: 217 VNTGRTEAYQE-----FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTED 271
+ G + +RH LP SS A I L + SE +EL D
Sbjct: 83 DSNGNKTLDKRTCDHILKVRHT--LPHSSAA----AIYHLRRSTGLTCSEHTVIELTGPD 136
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPVDPKI-IDSIRRQI 328
R GLLS+I+ + ++ AE+ T +V Y D+ TG P+ + +D IR Q+
Sbjct: 137 RPGLLSEISAVLTRLECNVNGAEVWTHNQRVASIIYFNDINTGRPITAQSKLDHIRGQL 195
>gi|356554239|ref|XP_003545456.1| PREDICTED: uncharacterized protein LOC100820595 [Glycine max]
Length = 483
Score = 301 bits (771), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 172/401 (42%), Positives = 239/401 (59%), Gaps = 44/401 (10%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---------------- 44
MDVF+V D +G K+ D++VI+ IQQ + + +PS + S
Sbjct: 78 MDVFHVRDENGNKLTDQKVINDIQQAIGRSRASSPSQQHSNNNNNNSVFTTMTNYKTYSK 137
Query: 45 --------PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 96
P ++HT+IE TG DRPGLFSE+ A LADLHCN+V A W+HN R A V +++
Sbjct: 138 RLLPLLPNPNDQHTAIEMTGADRPGLFSEISAALADLHCNIVEAHAWSHNARLACVAYIS 197
Query: 97 DHSTGYAIKDPKRLSTIKELLFNVLR--------GYDDFRKAKTS--LSPPGIMNR-ERR 145
D ST AI DP RL++I++ L VLR G + KTS L G M ERR
Sbjct: 198 DQSTDTAIDDPSRLASIEDHLTTVLRATTNPNGGGGANHPDVKTSELLGGEGQMTTVERR 257
Query: 146 LHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCT 204
LHQ+M RD+E E K + V+V + E K Y+++++ KDRP+L+FD VCT
Sbjct: 258 LHQLMLSVRDFETPSSP---KEKKGRKRMVSVESCEQKGYSIVSIECKDRPRLMFDTVCT 314
Query: 205 LTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
LTDMQYV+FH + + A QE++IRHVDG + + +E+ERV++CLEAAIERR EG+
Sbjct: 315 LTDMQYVIFHASITSHAGYACQEYFIRHVDGCALDTASEKERVMKCLEAAIERRVCEGIR 374
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII-DS 323
LELC ++RVGLLSDITR+ REN L + RA++ T G K + FYV D++GN VD + +S
Sbjct: 375 LELCADNRVGLLSDITRVLRENGLVVVRADVETHGEKSVNAFYVRDISGNEVDIEYFSNS 434
Query: 324 IRRQIGH-TKLQVKRSTI-LAPKPPKETTTGFFLGNFFKAR 362
+++++G L VK T P PK+ F G ++R
Sbjct: 435 VKKEMGPIATLHVKNDTNRRKPNSPKQAPLSF--GGMLRSR 473
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIG 329
++ GLL ++ +I + +L I ++ IS+ G D F+V D GN + D K+I+ I++ IG
Sbjct: 46 NKQGLLLEVVQILTDMNLQICKSFISSDAGWFMDVFHVRDENGNKLTDQKVINDIQQAIG 105
Query: 330 HTK 332
++
Sbjct: 106 RSR 108
>gi|224129764|ref|XP_002320665.1| predicted protein [Populus trichocarpa]
gi|222861438|gb|EEE98980.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 157/369 (42%), Positives = 226/369 (61%), Gaps = 19/369 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGV-------MPTEEHTSIE 53
M+VF+V D G K+ D +I YIQQ L D S S + + +HT++E
Sbjct: 77 MEVFHVTDQLGSKLTDDSLILYIQQALCVDRRRGVSKESQTSLHREVRPPYASTDHTAME 136
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
TGTDRPGL SE+ AVL+ L C+V + +WTHN+RAA+++++ D G I DPKRL+ +
Sbjct: 137 ITGTDRPGLLSEISAVLSKLECHVTASAVWTHNNRAASIIYMEDGFQGGPITDPKRLAHV 196
Query: 114 KELLFNVL---RGYDDFRKAKTSLSPPGIMNRE-RRLHQIMFDDRDYERVEKAVGRVEDK 169
+E L NV+ G + R + + PG RRLHQ+M+ + DYE + G
Sbjct: 197 QEQLENVVEAHHGVGERRSVRLTAPAPGQKTHTGRRLHQLMYANMDYEPCQGCNG--GGL 254
Query: 170 SSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
+ R T +++ EK Y+V+ +RS+DRPKLLFD +C LTDMQYVVFH V+ T
Sbjct: 255 AHRNNCTKIHVSIDSCKEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHAAVSAKGTM 314
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIF 283
A QE++IR DG + +E+ER ++ QCL AAIERR S G L++CT +R+GLLS++TR F
Sbjct: 315 ADQEYFIRQQDGCTLDTESERHKLTQCLIAAIERRVSHGARLDICTHNRMGLLSNVTRAF 374
Query: 284 RENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP 343
REN LSI RAEI T G + +FYVTD +G +P+ ID +++++G + + V +S P
Sbjct: 375 RENGLSISRAEIGTNGDRAVGSFYVTDASGYEANPQAIDEVKKEMGGSVVVVNKSPGWTP 434
Query: 344 KPPKETTTG 352
K + + G
Sbjct: 435 KTSRTPSVG 443
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V V N +D T+I + S ++ +L ++V LTD+ V+ +++ + F++
Sbjct: 24 PRVCVDNETYQDCTLIKVDSANKQGILLEMVQVLTDLDLVISKSYISSDGGWFMEVFHVT 83
Query: 232 HVDGLPISSEAERERVIQCLEAAIERR--------------------ASEGLELELCTED 271
G ++ ++ + Q L ++RR +++ +E+ D
Sbjct: 84 DQLGSKLTDDSLILYIQQAL--CVDRRRGVSKESQTSLHREVRPPYASTDHTAMEITGTD 141
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRRQI- 328
R GLLS+I+ + + + + + T + Y+ D G P+ DPK + ++ Q+
Sbjct: 142 RPGLLSEISAVLSKLECHVTASAVWTHNNRAASIIYMEDGFQGGPITDPKRLAHVQEQLE 201
Query: 329 ----GHTKLQVKRSTIL-APKPPKETTTGFFLGNFFKA 361
H + +RS L AP P ++T TG L A
Sbjct: 202 NVVEAHHGVGERRSVRLTAPAPGQKTHTGRRLHQLMYA 239
>gi|224141917|ref|XP_002324307.1| predicted protein [Populus trichocarpa]
gi|222865741|gb|EEF02872.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 164/363 (45%), Positives = 237/363 (65%), Gaps = 30/363 (8%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVM----PTEEHTSIEF 54
MDVF+V D GKK+RD+ VI+YIQQ + D S+ P+ R+ + + EHT+IE
Sbjct: 76 MDVFHVKDEHGKKLRDQNVINYIQQVINCDLSPSYPPNARAYTNNIFEADHSSEHTAIEM 135
Query: 55 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 114
+GTDRPGLFSE+ A LADL CN+V W+HN R A V +++D S+ I+DP RL++I+
Sbjct: 136 SGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPIEDPHRLASIE 195
Query: 115 ELLFNVLRGYD----------DFRKAKTS--LSPPG-IMNRERRLHQIMFDDRDYE---- 157
+ L VLR + R+ KT L G + N ERRLHQ+M RD++
Sbjct: 196 DHLTTVLRANTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLMLSVRDFDGPIS 255
Query: 158 RVEKAVGRVEDKS-SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 215
G +K S+ V++ N +K+Y+++ + KDR +L+FD +CTL DMQYV+FH
Sbjct: 256 SSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLMFDTICTLNDMQYVIFHA 315
Query: 216 MVNT---GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDR 272
V++ GR A+QE++IRH DG ++E+E+ERVI+CLEAAIERR SEG+ L+L E+R
Sbjct: 316 SVSSDHDGR--AFQEYFIRHKDGYARNTESEKERVIKCLEAAIERRVSEGVLLKLRAENR 373
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTK 332
+GLLSDITR+ REN L++ RA+++T G K + FYV D++GN VD I S+++++G T
Sbjct: 374 LGLLSDITRVLRENGLAVVRADVATEGEKAVNAFYVRDISGNEVDMGFIKSMKKEMGLTD 433
Query: 333 LQV 335
L+V
Sbjct: 434 LEV 436
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 27/199 (13%)
Query: 182 KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 241
+D TV+ + S ++ LL ++V LTD+ + G +++ F+++ G + +
Sbjct: 33 EDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKGYISSDAGWFMDVFHVKDEHGKKLRDQ 92
Query: 242 ---AERERVIQC-LEAAIERRA-------------SEGLELELCTEDRVGLLSDITRIFR 284
++VI C L + A SE +E+ DR GL S+I+
Sbjct: 93 NVINYIQQVINCDLSPSYPPNARAYTNNIFEADHSSEHTAIEMSGTDRPGLFSEISAALA 152
Query: 285 ENSLSIKRAEISTIGGKVKDTFYVTDVTGN-PV-DPKIIDSIRRQIGHTKLQVKRSTILA 342
+ +I + ++ Y++D + + P+ DP + SI H ++ +T+ +
Sbjct: 153 DLQCNIVEVHAWSHNARLACVAYISDPSSHTPIEDPHRLASIE---DHLTTVLRANTVRS 209
Query: 343 PKPP-----KETTTGFFLG 356
P +E TG FLG
Sbjct: 210 AGEPSQINNREVKTGGFLG 228
>gi|296082058|emb|CBI21063.3| unnamed protein product [Vitis vinifera]
Length = 495
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 227/376 (60%), Gaps = 30/376 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---PTEEHTSIEFTGT 57
M VF+V D G K+ D+ VI+YIQQ + T SL V+ P EHT+IE +G
Sbjct: 81 MFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASEHTAIEMSGA 140
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGLFSE+ A LADL N+V A WTHN+R A V ++TD ST I+DP RL+ I+ L
Sbjct: 141 DRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPHRLAKIENHL 200
Query: 118 FNVL-------RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE--------RVEKA 162
VL + + + A + ERRLHQ+M D+E E
Sbjct: 201 ATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSAPTTSSSETP 260
Query: 163 VGRVED--KSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 219
+G ED + S+ V++ + E+ Y+++++ KDR +L+FD+VCT+TDMQY++FHG +
Sbjct: 261 LGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQYLIFHGSTAS 320
Query: 220 GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDI 279
A QE++IRH+DG ++SE E+E V++CLEAAIERR EG+ LELC +R+GLLSDI
Sbjct: 321 HGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCEGVRLELCANNRLGLLSDI 380
Query: 280 TRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD---------PKIIDSIRRQIGH 330
TR+ REN L++ RA++ T G K + FYV D++GN VD K I+S+++++G
Sbjct: 381 TRVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFIESVKKEMGP 440
Query: 331 TKLQVKRSTILAPKPP 346
L VK+ +P P
Sbjct: 441 IDLAVKKEITSSPSSP 456
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 182 KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 241
+D T++ + S ++ +L ++V LTDM + +++ F++R G ++
Sbjct: 38 EDCTLVKVNSINKQGILLEVVKVLTDMNLTISKSYISSDAGWFMFVFHVRDEHGNKLTD- 96
Query: 242 AERERVIQCLEAAI------------------ERRASEGLELELCTEDRVGLLSDITRIF 283
+RVI ++ AI ASE +E+ DR GL S+I+
Sbjct: 97 ---QRVINYIQQAIGTTREIPNSLTYVNNVIESEPASEHTAIEMSGADRPGLFSEISAAL 153
Query: 284 RENSLSIKRAEISTIGGKVKDTFYVTD 310
+ ++I A T ++ Y+TD
Sbjct: 154 ADLQVNIVEAHAWTHNERLACVAYITD 180
>gi|359476144|ref|XP_003631797.1| PREDICTED: uncharacterized protein LOC100852414 [Vitis vinifera]
Length = 481
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 227/376 (60%), Gaps = 30/376 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM---PTEEHTSIEFTGT 57
M VF+V D G K+ D+ VI+YIQQ + T SL V+ P EHT+IE +G
Sbjct: 78 MFVFHVRDEHGNKLTDQRVINYIQQAIGTTREIPNSLTYVNNVIESEPASEHTAIEMSGA 137
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGLFSE+ A LADL N+V A WTHN+R A V ++TD ST I+DP RL+ I+ L
Sbjct: 138 DRPGLFSEISAALADLQVNIVEAHAWTHNERLACVAYITDQSTDSRIEDPHRLAKIENHL 197
Query: 118 FNVL-------RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE--------RVEKA 162
VL + + + A + ERRLHQ+M D+E E
Sbjct: 198 ATVLGAANISRANHQEVKGADLHVGEATTTCAERRLHQLMLSVEDFEGPSAPTTSSSETP 257
Query: 163 VGRVED--KSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 219
+G ED + S+ V++ + E+ Y+++++ KDR +L+FD+VCT+TDMQY++FHG +
Sbjct: 258 LGLDEDDDEGSKTIVSIESCNERGYSIVSIECKDRLRLMFDVVCTITDMQYLIFHGSTAS 317
Query: 220 GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDI 279
A QE++IRH+DG ++SE E+E V++CLEAAIERR EG+ LELC +R+GLLSDI
Sbjct: 318 HGGYAMQEYFIRHIDGCTVNSEGEKEHVVKCLEAAIERRVCEGVRLELCANNRLGLLSDI 377
Query: 280 TRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD---------PKIIDSIRRQIGH 330
TR+ REN L++ RA++ T G K + FYV D++GN VD K I+S+++++G
Sbjct: 378 TRVLRENGLAVVRADVETQGEKAVNAFYVKDLSGNDVDTEFTEPKKKEKFIESVKKEMGP 437
Query: 331 TKLQVKRSTILAPKPP 346
L VK+ +P P
Sbjct: 438 IDLAVKKEITSSPSSP 453
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 63/147 (42%), Gaps = 22/147 (14%)
Query: 182 KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 241
+D T++ + S ++ +L ++V LTDM + +++ F++R G ++
Sbjct: 35 EDCTLVKVNSINKQGILLEVVKVLTDMNLTISKSYISSDAGWFMFVFHVRDEHGNKLTD- 93
Query: 242 AERERVIQCLEAAI------------------ERRASEGLELELCTEDRVGLLSDITRIF 283
+RVI ++ AI ASE +E+ DR GL S+I+
Sbjct: 94 ---QRVINYIQQAIGTTREIPNSLTYVNNVIESEPASEHTAIEMSGADRPGLFSEISAAL 150
Query: 284 RENSLSIKRAEISTIGGKVKDTFYVTD 310
+ ++I A T ++ Y+TD
Sbjct: 151 ADLQVNIVEAHAWTHNERLACVAYITD 177
>gi|15239390|ref|NP_197914.1| ACT domain-containing protein [Arabidopsis thaliana]
gi|332006043|gb|AED93426.1| ACT domain-containing protein [Arabidopsis thaliana]
Length = 500
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 160/372 (43%), Positives = 235/372 (63%), Gaps = 37/372 (9%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQ-----RLETD---ASFAPSLRSSVGVMPTEEHTSI 52
MDVF+V D G K+ DK VI++I+ R E+D AS A + + EHT+I
Sbjct: 78 MDVFHVKDEHGNKLTDKSVINHIKHAIGTSRRESDFIKASEANNNSLEPQLADHGEHTAI 137
Query: 53 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 112
E TGTDRPGLFSE+ A ADLHCNV+ A W+HN R A + +V+D +T I DP RL++
Sbjct: 138 EMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVSDDNTHTPIDDPSRLAS 197
Query: 113 IKELLFNVLRGYDDFRKAKTSLS-------------PPGIMNR--ERRLHQIMFDDRDYE 157
I++ L V+R D T + G MN ERRLHQ+M RD++
Sbjct: 198 IEDHLSTVIRATADPASNSTHVGHKENETDGFLAGQGKGCMNSNMERRLHQLMLSVRDFD 257
Query: 158 R-------VEKAVGRVE--DKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCT 204
+ ++E D R + T+++I E+ Y+++T++SKDR +L+FD +CT
Sbjct: 258 EPFCEPSSLSLLSSKLEYCDHKER-KTTIVSIGNCEERGYSIVTVKSKDRRRLMFDTICT 316
Query: 205 LTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
L DMQYV+FH + + +A+QE++IRH+DG +++E E+ERVI+CLEAAIERR EG++
Sbjct: 317 LVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKERVIKCLEAAIERRVCEGVK 376
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
LELC E+RVGLLSDITR+ REN L++ RA++ T G K + FYV D++GN +D + ++S+
Sbjct: 377 LELCAENRVGLLSDITRVLRENGLTVVRADVETQGQKSLNAFYVRDISGNKIDMEFVESV 436
Query: 325 RRQIGHTKLQVK 336
++++ L+VK
Sbjct: 437 KKEMRPIHLEVK 448
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+E++ GLL ++ +I + +L I ++ IS+ GG D F+V D GN + D +I+ I+
Sbjct: 44 SENKQGLLLEVVQILTDMNLIITKSYISSDGGWFMDVFHVKDEHGNKLTDKSVINHIKHA 103
Query: 328 IGHTK 332
IG ++
Sbjct: 104 IGTSR 108
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 83/204 (40%), Gaps = 35/204 (17%)
Query: 182 KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 241
+D TV+ + S+++ LL ++V LTDM ++ +++ F+++ G ++ +
Sbjct: 35 QDCTVVKVNSENKQGLLLEVVQILTDMNLIITKSYISSDGGWFMDVFHVKDEHGNKLTDK 94
Query: 242 AERERVIQCLEAAI--ERRAS---------------------EGLELELCTEDRVGLLSD 278
+ VI ++ AI RR S E +E+ DR GL S+
Sbjct: 95 S----VINHIKHAIGTSRRESDFIKASEANNNSLEPQLADHGEHTAIEMTGTDRPGLFSE 150
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVT-DVTGNPVD-----PKIIDSIRRQIGHTK 332
I F + ++ A + ++ YV+ D T P+D I D + I T
Sbjct: 151 IFAAFADLHCNVMEAHAWSHNARLACIAYVSDDNTHTPIDDPSRLASIEDHLSTVIRATA 210
Query: 333 LQVKRSTILAPKPPKETTTGFFLG 356
ST + K + T GF G
Sbjct: 211 DPASNSTHVGHK--ENETDGFLAG 232
>gi|109676322|gb|ABG37643.1| unknown [Populus trichocarpa]
Length = 2224
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 163/364 (44%), Positives = 234/364 (64%), Gaps = 31/364 (8%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMP-------TEEHTSIE 53
MDVF+V D GKK+RD+ VI+YIQQ + T PS ++ + EHT+IE
Sbjct: 1816 MDVFHVKDEHGKKLRDQNVINYIQQAIGTTRESTPSPPNARAYTNNIFEADHSSEHTAIE 1875
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
+GTDRPGLFSE+ A LADL CN+V W+HN R A V +++D S+ I+DP RL++I
Sbjct: 1876 MSGTDRPGLFSEISAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPIEDPHRLASI 1935
Query: 114 KELLFNVLRGYD----------DFRKAKTS--LSPPG-IMNRERRLHQIMFDDRDYE--- 157
++ L VLR + R+ KT L G + N ERRLHQ+M RD++
Sbjct: 1936 EDHLTTVLRANTVRSAGEPSQINNREVKTGGFLGGEGTVSNVERRLHQLMLSVRDFDGPI 1995
Query: 158 -RVEKAVGRVEDKS-SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 214
G +K S+ V++ N +K+Y+++ + KDR +L+FD +CTL DMQYV+FH
Sbjct: 1996 SSSSTGTGLNNNKGGSKMVVSIENCDQKEYSIVNIECKDRRRLMFDTICTLNDMQYVIFH 2055
Query: 215 GMVNT---GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTED 271
V++ GR A+QE++IRH DG ++E+E+ERVI+CLEAAIERR SEG+ L+L E+
Sbjct: 2056 ASVSSDHDGR--AFQEYFIRHKDGYARNTESEKERVIKCLEAAIERRVSEGVLLKLRAEN 2113
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT 331
R+GLLSDITR+ REN L++ RA+++T G K + FYV D++GN VD I S+++++G T
Sbjct: 2114 RLGLLSDITRVLRENGLAVVRADVATEGEKAVNAFYVRDISGNEVDMGFIKSMKKEMGLT 2173
Query: 332 KLQV 335
L+V
Sbjct: 2174 DLEV 2177
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 84/204 (41%), Gaps = 36/204 (17%)
Query: 182 KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 241
+D TV+ + S ++ LL ++V LTD+ + G +++ F+++ G +
Sbjct: 1773 EDCTVVKVDSVNKQGLLLEVVQVLTDLNLTIAKGYISSDAGWFMDVFHVKDEHGKKLRD- 1831
Query: 242 AERERVIQCLEAAI----------------------ERRASEGLELELCTEDRVGLLSDI 279
+ VI ++ AI +SE +E+ DR GL S+I
Sbjct: 1832 ---QNVINYIQQAIGTTRESTPSPPNARAYTNNIFEADHSSEHTAIEMSGTDRPGLFSEI 1888
Query: 280 TRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN-PV-DPKIIDSIRRQIGHTKLQVKR 337
+ + +I + ++ Y++D + + P+ DP + SI H ++
Sbjct: 1889 SAALADLQCNIVEVHAWSHNARLACVAYISDPSSHTPIEDPHRLASIE---DHLTTVLRA 1945
Query: 338 STILAPKPP-----KETTTGFFLG 356
+T+ + P +E TG FLG
Sbjct: 1946 NTVRSAGEPSQINNREVKTGGFLG 1969
>gi|297812735|ref|XP_002874251.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297320088|gb|EFH50510.1| ACT domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 502
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 159/376 (42%), Positives = 235/376 (62%), Gaps = 41/376 (10%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQ-----RLETDASFAPSLRSSVGVMPTE-------E 48
MDVF+V D G K+ DK VI++I+ R E+D A ++ E E
Sbjct: 78 MDVFHVKDEYGNKLTDKSVINHIKHAIGTSRRESDFIKASEAHNNPNNNSLESPLSDHGE 137
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
HT+IE TGTDRPGLFSE+ A ADLHCNV+ A W+HN R A + +V+D +T I DP
Sbjct: 138 HTAIEMTGTDRPGLFSEIFAAFADLHCNVMEAHAWSHNARLACIAYVSDDNTHTPIDDPS 197
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLS-------------PPGIMNR--ERRLHQIMFDD 153
RL++I++ L V+R D T + G MN ERRLHQ+M
Sbjct: 198 RLASIEDHLSTVIRATSDPASNSTHVGHKENETDGFLAGQGKGCMNSNVERRLHQLMLSV 257
Query: 154 RDYER-------VEKAVGRVE--DKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFD 200
RD++ + ++E D+ R + T+++I E+ Y+++T++SKDR +L+FD
Sbjct: 258 RDFDEPFCEPSSLSLLSSKLEYCDQKER-KTTIVSIGNCEERGYSIVTVKSKDRRRLMFD 316
Query: 201 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 260
+CTL DMQYV+FH + + +A+QE++IRH+DG +++E E+ERVI+CLEAAIERR
Sbjct: 317 TICTLVDMQYVIFHAALRSDGADAFQEYFIRHIDGRALNTEGEKERVIKCLEAAIERRVC 376
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
EG++LELC E+RVGLLSDITR+ REN L++ RA++ T G K + FYV D++GN +D +
Sbjct: 377 EGVKLELCAENRVGLLSDITRVLRENGLTVVRADVETQGQKSLNAFYVRDISGNKIDMEF 436
Query: 321 IDSIRRQIGHTKLQVK 336
++S+++++ L+VK
Sbjct: 437 VESVKKEMRPIHLEVK 452
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+E++ GLL ++ +I + +L I ++ IS+ GG D F+V D GN + D +I+ I+
Sbjct: 44 SENKQGLLLEVVQILTDMNLIITKSYISSDGGWFMDVFHVKDEYGNKLTDKSVINHIKHA 103
Query: 328 IGHTK 332
IG ++
Sbjct: 104 IGTSR 108
>gi|359497228|ref|XP_003635457.1| PREDICTED: uncharacterized protein LOC100854519, partial [Vitis
vinifera]
Length = 338
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 153/326 (46%), Positives = 212/326 (65%), Gaps = 18/326 (5%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
HT+ E TGTDRPGL SE+ AVLA+L C+V A WTHN R A ++ + D G I+DP+
Sbjct: 1 HTAFEITGTDRPGLMSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPE 60
Query: 109 RLSTIKELLFNVLRG-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAVGR 165
RL ++E L NV+ + + K L+ P G + +RRLHQ+MF D+DYER G
Sbjct: 61 RLVHVEEQLENVVEARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER---CCGG 117
Query: 166 VEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 224
+ S R QV++ N EK Y+V+ ++S+DRPKLLFD VCTLTDMQYVVFH V++ + A
Sbjct: 118 CDGSSDRIQVSIENCKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIA 177
Query: 225 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFR 284
QE++IR +DG + +E+ER RV QCL AAIERR + GL L++ ++R+GLLSDITR+FR
Sbjct: 178 VQEYFIRQMDGCTLGTESERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFR 237
Query: 285 ENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTI---L 341
EN LSI+ AEI G + +FYVTDV+G V P ++ IR++IG T + V +S++ L
Sbjct: 238 ENGLSIRMAEIGIHGERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSL 297
Query: 342 APKPPKETTTG--------FFLGNFF 359
P ++ +T F LG +
Sbjct: 298 PASPSRDRSTASSVENRPRFSLGTLW 323
>gi|125604137|gb|EAZ43462.1| hypothetical protein OsJ_28068 [Oryza sativa Japonica Group]
Length = 415
Score = 290 bits (743), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 174/383 (45%), Positives = 229/383 (59%), Gaps = 56/383 (14%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLET-DASFAPSLRSSVGVMPTEEHTSIEFTGTDR 59
MDVFNV D DG K+++KEV D I++ LE+ D P+ + G P+EE T IE TGTDR
Sbjct: 80 MDVFNVTDQDGNKVQNKEVTDCIKKCLESEDYLVLPASSPAGGAAPSEETTCIELTGTDR 139
Query: 60 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119
PGL SEVCAVLA L CN+VNAE+WTH+ RAAAV+ +TD +TG ++D RLS ++ELL N
Sbjct: 140 PGLLSEVCAVLASLRCNIVNAEVWTHDRRAAAVIQITDEATGLPVRDGGRLSQLQELLGN 199
Query: 120 VLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
V++G D RK T++S G N ERRLH++M DD D R + G V ++ +V
Sbjct: 200 VMQGDGDGGGDSRKGSTAVS-LGAANAERRLHRLMLDDGDAGRCGEERGGVAAAKAKAKV 258
Query: 176 TVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
V++ E+ YTV+ +R +DRP+LLFD + LTD+ YVVFHG
Sbjct: 259 VVMDCTERRYTVVILRCRDRPRLLFDTLSPLTDLHYVVFHGT------------------ 300
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
GLELE+ TEDR GLLS+ITR+FRENSLSI RA
Sbjct: 301 ---------------------------GLELEVKTEDRAGLLSEITRVFRENSLSIIRAV 333
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPPKETTT 351
I+T G+ DTFYV+D GNPVD K ++++ Q+GH L+VK R+ I +
Sbjct: 334 ITTKDGEADDTFYVSDAYGNPVDGKAMEALGEQLGHAVLRVKSNGRAAINRAEDSGGGGA 393
Query: 352 GFFLGNFFKARTFQTFKLIRSYS 374
+GN K +FQ F+LIRSYS
Sbjct: 394 AAIIGNLLKG-SFQGFRLIRSYS 415
>gi|168034813|ref|XP_001769906.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678812|gb|EDQ65266.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 449
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 160/333 (48%), Positives = 215/333 (64%), Gaps = 8/333 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQ-----QRLETDASFAPSLRSSVGVMPTEEHTSIEFT 55
MDVF+V D G KIRD+++I IQ Q+ + A F SVG EHT+IE T
Sbjct: 77 MDVFHVTDQKGLKIRDEKLIGNIQKALSLQKKKWTAEFQKCPGRSVGTQTISEHTAIELT 136
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
GTDRPGL SEV AVLA++ C V AE+WTHN R A V++VTD T I++ ++L I E
Sbjct: 137 GTDRPGLLSEVTAVLAEMSCRVNAAEVWTHNRRVACVMYVTDEDTLGPIENVRKLERILE 196
Query: 116 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L +++G DD + A+ S+ + ERRLHQ+M D D + K P +
Sbjct: 197 KLNPIMQGCDDEKVAR-SVVAESFTHVERRLHQLMLADHDSDPSVSQSQISSRKQKNPNI 255
Query: 176 TV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
TV + EK+Y+V+ ++ DRPKLLFD VCTLTD++YVV H + + A QE++IR +D
Sbjct: 256 TVEIGSEKNYSVVKVQCLDRPKLLFDTVCTLTDLKYVVSHATIYPSGSYAVQEYHIRSMD 315
Query: 235 GLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAE 294
G + A + +V +CLEAAIERR+SEGL L LCT DR GLL+++TR FREN LS+ RAE
Sbjct: 316 GRTLDDPA-KAKVKRCLEAAIERRSSEGLRLYLCTTDRPGLLTEVTRTFRENGLSVTRAE 374
Query: 295 ISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQ 327
+ST G K +TFYVTDV G PVD K +++IR++
Sbjct: 375 VSTQGDKAVNTFYVTDVNGLPVDLKKVEAIRKE 407
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 25/159 (15%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N EK+ T++ + S+++ L ++V L DM + + + F++
Sbjct: 24 PKVMIDNDSEKNATLVKVSSQNKHGTLLEVVQELMDMDLTISKAYITSDGGWFMDVFHVT 83
Query: 232 HVDGLPISSEAERERVIQCLEAAIE--------------------RRASEGLELELCTED 271
GL I E++I ++ A+ + SE +EL D
Sbjct: 84 DQKGLKIRD----EKLIGNIQKALSLQKKKWTAEFQKCPGRSVGTQTISEHTAIELTGTD 139
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
R GLLS++T + E S + AE+ T +V YVTD
Sbjct: 140 RPGLLSEVTAVLAEMSCRVNAAEVWTHNRRVACVMYVTD 178
>gi|255568655|ref|XP_002525301.1| amino acid binding protein, putative [Ricinus communis]
gi|223535459|gb|EEF37129.1| amino acid binding protein, putative [Ricinus communis]
Length = 477
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 241/405 (59%), Gaps = 36/405 (8%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVG--VMP---TEEHTSIE 53
MDVF+V D G K+ D+ +I YIQQ L T+ A + L++ + V P + +HT++E
Sbjct: 76 MDVFHVTDQLGNKLTDESLILYIQQALCTNRRAGASQELQNCLKREVRPRHVSTDHTAME 135
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
TG DRPG+ SE+ AVLA+L C+V A WTHN RAA ++++ D +G I D +L+ +
Sbjct: 136 MTGIDRPGMLSEISAVLAELQCHVTAAVAWTHNSRAACIIYMEDGLSGGPITDSNKLAHV 195
Query: 114 KELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE-DK 169
+E L NV+ G + R + + G + ERRLHQ+M DYE G + D
Sbjct: 196 EEQLQNVVEAHHGIGEMRSVRLASPVTGQTHTERRLHQLMSATLDYE---PCCGCTDGDA 252
Query: 170 SSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
+ + T +++ EK Y+V+ MRS DRPKLLFD +C LTDMQYVVFH V++ T
Sbjct: 253 AHQRNCTKIHVSIESCKEKGYSVVNMRSMDRPKLLFDTLCALTDMQYVVFHAAVSSKGTM 312
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIF 283
A QE++IRH DG + +E+ER ++ +CL AA ERRAS GL L++ T +RVGLLSD+TR+F
Sbjct: 313 ARQEYFIRHKDGCTLDTESERHKLTKCLIAATERRASHGLRLDISTHNRVGLLSDVTRVF 372
Query: 284 RENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP 343
REN LSI RAEI G + +FY+TD +G+ + ++ +R++IG + L V +S P
Sbjct: 373 RENGLSISRAEIGLQGDRAVGSFYITDASGDEANTHTLELVRKEIGGSVLVVNKSPGWTP 432
Query: 344 KPP-----KETTTG--------FFLGNFFKA---RTFQTFKLIRS 372
+ P T++G F LG+ + R F IRS
Sbjct: 433 RTPSTAGISRTSSGSVGEEKPKFSLGSLLWSQLERLSGNFGSIRS 477
>gi|226506214|ref|NP_001148163.1| LOC100281771 [Zea mays]
gi|195616314|gb|ACG29987.1| ACR5 [Zea mays]
gi|414869678|tpg|DAA48235.1| TPA: ACR5 [Zea mays]
Length = 471
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 185/393 (47%), Positives = 240/393 (61%), Gaps = 19/393 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHTSIEFTGT 57
MDVF+V+D DG K+ D +VID I+Q L + SF P +V E T+IE G
Sbjct: 79 MDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQTTIELVGR 138
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI+DP RL T + LL
Sbjct: 139 DRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARLDTARRLL 198
Query: 118 FNVLRGYD-DFRKAKTSLSPPGIMNRERRLHQIMFDDRD-----YERVEKAVGRVEDKSS 171
+VLRG D + A+ ++S + + RRLHQ+M DR E R +
Sbjct: 199 RHVLRGSSRDKKAARAAVSARVVEHAPRRLHQMMRADRSARRDGEGEGEGDGERERGGAG 258
Query: 172 RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
P V V + E+ YT++ +R +DR KLLFD VCTLTDMQYVVFHG V +EAYQE+YI
Sbjct: 259 MPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYI 318
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 290
RH+D SS ERER+ + LEAAI+RR +EGL LELC EDRVGLLSD+TR+FRE+ LS+
Sbjct: 319 RHLDDRAASSGEERERLRRGLEAAIQRRYTEGLRLELCCEDRVGLLSDVTRVFREHGLSV 378
Query: 291 KRAEISTIGGKVKDTFYVTDV-TGNPVDPKIIDSIRRQIGHTKLQVKR---STILAPKPP 346
AE+ T G + + FYV D +G PV + + ++R +IG L V+ + A
Sbjct: 379 THAEVGTRGARAANVFYVVDASSGEPVQAQAVAAVRAEIGEQLLFVREHQDAAAAAANGT 438
Query: 347 KETTTGF--FLGNFFKART---FQTFKLIRSYS 374
+ T G LGN ++R+ LIRS S
Sbjct: 439 RSTVAGGRRSLGNMIRSRSEKFLYNLGLIRSCS 471
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
L++ + ++ G L ++ ++ + L+IKRA IS+ G D F+V D GN + D ++ID
Sbjct: 41 LKVDSANKYGTLLEVVQVLTDLKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDCQVIDR 100
Query: 324 IRRQIGHTKLQVK 336
I + +G L +
Sbjct: 101 IEQSLGAGSLSFR 113
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 19/176 (10%)
Query: 173 PQVTVLNIEKDYTVITMR--SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
P+VTV N + D T ++ S ++ L ++V LTD++ + +++ F++
Sbjct: 26 PRVTVDN-DSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYISSDGEWFMDVFHV 84
Query: 231 RHVDGLPISSEAERERVIQCLEAA--------------IERRASEGLELELCTEDRVGLL 276
DG + +R+ Q L A +EL DR GLL
Sbjct: 85 VDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQTTIELVGRDRPGLL 144
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV--TGNPVDPKIIDSIRRQIGH 330
S++ + + ++ +E+ T G+V +VTD G DP +D+ RR + H
Sbjct: 145 SEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARLDTARRLLRH 200
>gi|224095019|ref|XP_002310330.1| predicted protein [Populus trichocarpa]
gi|222853233|gb|EEE90780.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 288 bits (737), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 168/409 (41%), Positives = 239/409 (58%), Gaps = 39/409 (9%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA--SFAPSLRSSVG--VMP---TEEHTSIE 53
MDVF+V D G K+ D+ +I YIQQ L + + L + + V P + EHT++E
Sbjct: 76 MDVFHVTDQLGNKLTDESLILYIQQALCANRRRGVSKELPTCLNREVRPRHVSTEHTTLE 135
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
GTDRPGL SE+ AVL +L C+V A WTHN RAA+++++ D G I DPKRL+ +
Sbjct: 136 MAGTDRPGLLSEISAVLFELECHVTAALAWTHNTRAASIIYMEDGFRGGPITDPKRLAHV 195
Query: 114 KELLFNVL---RGYDDFRKAKTSLSPPGIMNR-ERRLHQIMFDDRDYERVEKAVGRVEDK 169
+E L NV+ G + R + + PG ERRLHQ+M+ + DYE + G
Sbjct: 196 QEQLENVVEARHGMGERRSVRLTAPAPGQQTHTERRLHQLMYANIDYEPCQGCNG--GGA 253
Query: 170 SSRPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
+ R T ++ EK Y+V+ +RS+DRPKLLFD +C LTDMQYVVFH +V++ T
Sbjct: 254 AHRNNCTKTHVFIESCEEKGYSVVNVRSRDRPKLLFDTLCALTDMQYVVFHAVVSSKGTM 313
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIF 283
A QE++IR DG + +++ER ++ QCL AAIERR S GL L++ T +R+GLLSD+TR F
Sbjct: 314 ADQEYFIRQKDGCTLDTDSERHKLTQCLIAAIERRVSHGLRLDIRTHNRMGLLSDLTRAF 373
Query: 284 RENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP 343
REN LSI AEI T G + +FYVTD +G +P++I+ ++++IG + + V +S P
Sbjct: 374 RENGLSISSAEIGTNGDRAVGSFYVTDASGYEANPQVIEHVKKEIGGSIVVVNKSPGWTP 433
Query: 344 KPPKETTTG-----------------FFLGNFFKA---RTFQTFKLIRS 372
K K + F LG+ F + R F IRS
Sbjct: 434 KTSKTPSVASISRTSSGSSIHEDKPRFSLGSLFWSQLERLSNNFSSIRS 482
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 27/206 (13%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N +D T++ S ++ +L ++V LTD+ V+ +++ F++
Sbjct: 23 PRVCIDNEAYQDCTLVKADSANKHGILLEMVQVLTDLDLVISKSYISSDGGWFMDVFHVT 82
Query: 232 HVDGLPISSE-----------AERERVIQ-----CLEAAIERR--ASEGLELELCTEDRV 273
G ++ E A R R + CL + R ++E LE+ DR
Sbjct: 83 DQLGNKLTDESLILYIQQALCANRRRGVSKELPTCLNREVRPRHVSTEHTTLEMAGTDRP 142
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRRQIG-- 329
GLLS+I+ + E + A T + Y+ D G P+ DPK + ++ Q+
Sbjct: 143 GLLSEISAVLFELECHVTAALAWTHNTRAASIIYMEDGFRGGPITDPKRLAHVQEQLENV 202
Query: 330 ----HTKLQVKRSTILAPKPPKETTT 351
H + + + AP P ++T T
Sbjct: 203 VEARHGMGERRSVRLTAPAPGQQTHT 228
>gi|219886627|gb|ACL53688.1| unknown [Zea mays]
Length = 471
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 184/393 (46%), Positives = 237/393 (60%), Gaps = 19/393 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF--APSLRSSVGVMPTEEHTSIEFTGT 57
MDVF+V+D DG K+ D +VID I+Q L + SF P +V E T+IE G
Sbjct: 79 MDVFHVVDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQTTIELVGR 138
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL SEV AVLADL CNVV +E+WTH+ R AA+VHVTD T AI+DP RL T + LL
Sbjct: 139 DRPGLLSEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARLDTARRLL 198
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRE-RRLHQIMFDDRD-----YERVEKAVGRVEDKSS 171
+VLRG +KA + ++ RRLHQ+M DR E R +
Sbjct: 199 RHVLRGSSRDKKAARAAVSARVVEYAPRRLHQMMRADRSARRDGEGEGEGDGERERGGAG 258
Query: 172 RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
P V V + E+ YT++ +R +DR KLLFD VCTLTDMQYVVFHG V +EAYQE+YI
Sbjct: 259 MPVVAVEDCAERGYTLVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEYYI 318
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 290
RH+D SS ERER+ + LEAAI+RR +EGL LELC EDRVGLLSD+TR+FRE+ LS+
Sbjct: 319 RHLDDRAASSGEERERLRRGLEAAIQRRYTEGLRLELCCEDRVGLLSDVTRVFREHGLSV 378
Query: 291 KRAEISTIGGKVKDTFYVTDV-TGNPVDPKIIDSIRRQIGHTKLQVKR---STILAPKPP 346
AE+ T G + + FYV D +G PV + + ++R +IG L V+ + A
Sbjct: 379 THAEVGTRGARAANVFYVVDASSGEPVQAQAVAAVRAEIGEQLLFVREHQDAAAAAANGT 438
Query: 347 KETTTGF--FLGNFFKART---FQTFKLIRSYS 374
+ T G LGN ++R+ LIRS S
Sbjct: 439 RSTVAGGRRSLGNMIRSRSEKFLYNLGLIRSCS 471
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
L++ + ++ G L ++ ++ + L+IKRA IS+ G D F+V D GN + D ++ID
Sbjct: 41 LKVDSANKYGTLLEVVQVLTDLKLTIKRAYISSDGEWFMDVFHVVDQDGNKLYDCQVIDR 100
Query: 324 IRRQIGHTKLQVK 336
I + +G L +
Sbjct: 101 IEQSLGAGSLSFR 113
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 75/176 (42%), Gaps = 19/176 (10%)
Query: 173 PQVTVLNIEKDYTVITMR--SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
P+VTV N + D T ++ S ++ L ++V LTD++ + +++ F++
Sbjct: 26 PRVTVDN-DSDMTATLLKVDSANKYGTLLEVVQVLTDLKLTIKRAYISSDGEWFMDVFHV 84
Query: 231 RHVDGLPISSEAERERVIQCLEAA--------------IERRASEGLELELCTEDRVGLL 276
DG + +R+ Q L A +EL DR GLL
Sbjct: 85 VDQDGNKLYDCQVIDRIEQSLGAGSLSFRGPPERAVAVEAEAEEAQTTIELVGRDRPGLL 144
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV--TGNPVDPKIIDSIRRQIGH 330
S++ + + ++ +E+ T G+V +VTD G DP +D+ RR + H
Sbjct: 145 SEVFAVLADLRCNVVASEVWTHDGRVAALVHVTDADTLGAIEDPARLDTARRLLRH 200
>gi|125543116|gb|EAY89255.1| hypothetical protein OsI_10752 [Oryza sativa Indica Group]
Length = 398
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 174/385 (45%), Positives = 221/385 (57%), Gaps = 27/385 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G+K+ D D + RLE+ S R++ G E T +E G DRP
Sbjct: 30 MDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVGADRP 86
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL DL CN V A WTH R AA+V V D TG I D R+ I+ L +V
Sbjct: 87 GLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLRHV 146
Query: 121 LRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL- 178
LRG R A+T L+ P N +RRLHQ++ +D G + + + P V
Sbjct: 147 LRG--GARCARTVLADPSAAGNLDRRLHQLLNED----------GEADSRGAAPMTAVAV 194
Query: 179 --NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR DG
Sbjct: 195 QDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGR 254
Query: 237 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
PISSEAER+ VI+CL+AAIERRASEG+ LEL DR GLL+ +TR+FREN LS+ AEI+
Sbjct: 255 PISSEAERQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEIT 314
Query: 297 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR-------STILAPKPPKET 349
T + F+VTDV G P DPK ID + ++IG L+V S
Sbjct: 315 TRDDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSAEGDAAGRGGG 374
Query: 350 TTGFFLGNFFKARTFQTFKLIRSYS 374
F LG+ K F + LIRS S
Sbjct: 375 GGLFSLGSLVKKNLF-SLGLIRSCS 398
>gi|413937243|gb|AFW71794.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937244|gb|AFW71795.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
gi|413937245|gb|AFW71796.1| hypothetical protein ZEAMMB73_478784 [Zea mays]
Length = 460
Score = 286 bits (732), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 159/355 (44%), Positives = 220/355 (61%), Gaps = 28/355 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASF-----APSLRSSVGVMPTEEHTSIEFT 55
MDVF+V+D G+KI D + I YI++ L +++ + S SVG+ +HT+IE
Sbjct: 72 MDVFHVVDKQGQKITDDKTIKYIEKALGPESNLLGAKGSNSAGRSVGLHSIGDHTAIELK 131
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
G DR GL SE+ AVLADL CNV+ AE+WTH R A VV+V D +TG AI DP R++ +++
Sbjct: 132 GPDRRGLLSEIFAVLADLQCNVLAAEVWTHRMRVACVVYVNDVATGQAIDDPDRVARVED 191
Query: 116 LLFNVLR----------------GYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 159
L +VLR + +F A S +P + +RRLHQ+M D D
Sbjct: 192 RLRHVLRGYGGGGGAGDDDDGSGAHANF--AAASSTPHHV---DRRLHQLMHADVDAVHG 246
Query: 160 EKAVGRVEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
+ A + RP VTV + E K Y+V+ ++ KDR KLLFDIVCTLTDM+YVVFH V+
Sbjct: 247 DGAHAAAGGEGDRPAVTVEHCEEKSYSVVNVKCKDRSKLLFDIVCTLTDMEYVVFHAAVS 306
Query: 219 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSD 278
+ QE YIR DG + + E E+VI+CLEAAI RR SEG LE+C DRVGLLSD
Sbjct: 307 SEANYGIQELYIRRKDGKTLLKD-EAEKVIRCLEAAISRRVSEGFTLEVCGRDRVGLLSD 365
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL 333
+TR+ RE+ L++ RA+++T GG+ + FYV + +G PVD K ++ +R Q G T +
Sbjct: 366 VTRVLREHGLTVSRADVTTAGGQATNVFYVRNPSGQPVDMKTVEGLRGQFGQTAM 420
>gi|108707164|gb|ABF94959.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|125860406|dbj|BAF46926.1| ACT-domain repeat protein 9 [Oryza sativa Japonica Group]
gi|215769363|dbj|BAH01592.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 174/385 (45%), Positives = 221/385 (57%), Gaps = 27/385 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G+K+ D D + RLE+ S R++ G E T +E G DRP
Sbjct: 74 MDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVGADRP 130
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL DL CN V A WTH R AA+V V D TG I D R+ I+ L +V
Sbjct: 131 GLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLRHV 190
Query: 121 LRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL- 178
LRG R A+T L+ P N +RRLHQ++ +D G + + + P V
Sbjct: 191 LRG--GARCARTVLADPSAAGNLDRRLHQLLKED----------GEADSRGAAPMTAVAV 238
Query: 179 --NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR DG
Sbjct: 239 QDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGR 298
Query: 237 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
PISSEAER+ VI+CL+AAIERRASEG+ LEL DR GLL+ +TR+FREN LS+ AEI+
Sbjct: 299 PISSEAERQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEIT 358
Query: 297 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR-------STILAPKPPKET 349
T + F+VTDV G P DPK ID + ++IG L+V S
Sbjct: 359 TRDDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSAEGDAAGRGGG 418
Query: 350 TTGFFLGNFFKARTFQTFKLIRSYS 374
F LG+ K F + LIRS S
Sbjct: 419 GGLFSLGSLVKKNLF-SLGLIRSCS 442
>gi|242041567|ref|XP_002468178.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
gi|241922032|gb|EER95176.1| hypothetical protein SORBIDRAFT_01g041100 [Sorghum bicolor]
Length = 448
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 169/389 (43%), Positives = 224/389 (57%), Gaps = 29/389 (7%)
Query: 1 MDVFNVIDCDGKKIRDKE-VIDYIQQRLETDA---SFAPSLRSSVGVMPTEEHTSIEFTG 56
MDVF+V D G+K+ D + ++ ++ L DA P+ G P T +E G
Sbjct: 74 MDVFHVTDASGRKVADADALLARLESSLTADALPPRTPPAAAVGNGAGPAMP-TLLELVG 132
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SEV AVL DL C++ +A WTH R AA+V V D TG I D R+ ++
Sbjct: 133 ADRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDVETGAPIDDAARVRRVESR 192
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 176
L +VLRG A+ +N +RRLHQ++ +D G E ++ + T
Sbjct: 193 LRHVLRG--GALGARMVREDAAAVNMDRRLHQLLNED----------GEAECRADQADAT 240
Query: 177 VLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 232
+ + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR
Sbjct: 241 AVAVQDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRR 300
Query: 233 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 292
+DG PISS AER RVIQCL+AAIERRASEG+ LEL DR GLL+ +TR+FRENSLS+
Sbjct: 301 LDGRPISSAAERRRVIQCLQAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTH 360
Query: 293 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR-------STILAPKP 345
AEI+T G K + F+VTDV G P DPK ID + ++IG L+V ST
Sbjct: 361 AEITTRGDKAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEGDAGR 420
Query: 346 PKETTTGFFLGNFFKARTFQTFKLIRSYS 374
F LG+ K + + LIRS S
Sbjct: 421 GGGGAGIFSLGSLVK-KNLASLGLIRSCS 448
>gi|125582506|gb|EAZ23437.1| hypothetical protein OsJ_07127 [Oryza sativa Japonica Group]
Length = 610
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 162/365 (44%), Positives = 218/365 (59%), Gaps = 29/365 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTEEHTSIEF 54
MDVF+V+D G+K+ D++ I +I++ L D++ + SVG+ +HT+IE
Sbjct: 201 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 260
Query: 55 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 114
G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP RLS I+
Sbjct: 261 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 320
Query: 115 ELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIMFDDRDYERVEKAV 163
L VLRG+ P + +RRLHQ+M D D + +
Sbjct: 321 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLD 380
Query: 164 GRV---------EDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 213
R RP VTV + E KDY+V+ ++ +DR KLLFDIVCTLTDM YVV
Sbjct: 381 SRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVS 440
Query: 214 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRV 273
H V++ QE YIR DG + + E RVI+CLEAAI RR SEG LELC DRV
Sbjct: 441 HASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRDRV 499
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-K 332
GLLSD+TR+ RE+ L++ RA+++T+GG+ + FYV D +G PVD K I+ +R Q+GHT
Sbjct: 500 GLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVM 559
Query: 333 LQVKR 337
L VK+
Sbjct: 560 LNVKK 564
>gi|125539879|gb|EAY86274.1| hypothetical protein OsI_07644 [Oryza sativa Indica Group]
Length = 608
Score = 284 bits (726), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 169/404 (41%), Positives = 228/404 (56%), Gaps = 46/404 (11%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTEEHTSIEF 54
MDVF+V+D G+K+ D++ I +I++ L D++ + SVG+ +HT+IE
Sbjct: 201 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 260
Query: 55 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 114
G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP RLS I+
Sbjct: 261 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 320
Query: 115 ELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIMFDDRDYERVEKAV 163
L VLRG+ P + +RRLHQ+M D D + +
Sbjct: 321 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLD 380
Query: 164 GRV---------EDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 213
R RP VTV + E KDY+V+ ++ +DR KLLFDIVCTLTDM YVV
Sbjct: 381 SRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVS 440
Query: 214 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRV 273
H V++ QE YIR DG + + E RVI+CLEAAI RR SEG LELC DRV
Sbjct: 441 HASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRDRV 499
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-K 332
GLLSD+TR+ RE+ L++ RA+++T+GG+ + FYV D +G PVD K I+ +R Q+GHT
Sbjct: 500 GLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVM 559
Query: 333 LQVKR----------STILAPKPPKETTTG-------FFLGNFF 359
L VK+ + K P + +G F GN F
Sbjct: 560 LNVKKVPSSPSSSSSAAAANGKSPGQPASGALSRTSFFSFGNLF 603
>gi|115474541|ref|NP_001060867.1| Os08g0118100 [Oryza sativa Japonica Group]
gi|42407901|dbj|BAD09041.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725644|dbj|BAD33111.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113622836|dbj|BAF22781.1| Os08g0118100 [Oryza sativa Japonica Group]
Length = 441
Score = 283 bits (725), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 172/388 (44%), Positives = 231/388 (59%), Gaps = 30/388 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G K+ D VI YI+Q L T P+ +++ E T++E TG DR
Sbjct: 70 MDVFHVTDRLGCKLTDDSVITYIEQSLGT--WNGPARPAAL-----EGLTALELTGADRT 122
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+ L ++
Sbjct: 123 GLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEARLGHL 177
Query: 121 LRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
LRG A ++ + + ERRLHQ+M DRD E + S P V+V +
Sbjct: 178 LRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE---ERAAAAAAASPTPAVSVQS 234
Query: 180 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
E+ Y+V+T++ +DRPKLLFD+VCTLTDM YVVFHG ++T +A+QEFYIRH DG PI
Sbjct: 235 WAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGSPI 294
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SSEAER RV QCL+ AIERR+ EG+ LELCT DR LLSD+TR FREN L + +AE+ST
Sbjct: 295 SSEAERHRVSQCLQDAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQAEVSTK 354
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPPKETTTG--- 352
G + FYVTD G+ V+ ID++R+++G L + R + P++ G
Sbjct: 355 GDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDAVDGNGG 414
Query: 353 ------FFLGNFFKARTFQTFKLIRSYS 374
F+LGNF K R + LI+S S
Sbjct: 415 GGGIGLFYLGNFVK-RNLVSLGLIKSCS 441
>gi|115446687|ref|NP_001047123.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|46389854|dbj|BAD15455.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|50725785|dbj|BAD33316.1| putative ACT domain-containing protein [Oryza sativa Japonica
Group]
gi|113536654|dbj|BAF09037.1| Os02g0555600 [Oryza sativa Japonica Group]
gi|215701465|dbj|BAG92889.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 481
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 162/365 (44%), Positives = 218/365 (59%), Gaps = 29/365 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS------SVGVMPTEEHTSIEF 54
MDVF+V+D G+K+ D++ I +I++ L D++ + SVG+ +HT+IE
Sbjct: 72 MDVFHVVDKQGQKVTDEKTIKHIEKALGPDSNLLGGAKGGSSPVRSVGMHSIGDHTAIEL 131
Query: 55 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 114
G DR GL SEV AVLA+L CNV+ AE+WTH R A VV+V D ++G A+ DP RLS I+
Sbjct: 132 KGPDRTGLLSEVFAVLAELGCNVLAAEVWTHRARVACVVYVNDVASGQAVGDPCRLSRIE 191
Query: 115 ELLFNVLRGYDDFRKAKTSLSPPGI-----------MNRERRLHQIMFDDRDYERVEKAV 163
L VLRG+ P + +RRLHQ+M D D + +
Sbjct: 192 HRLRLVLRGHAGGDDGDGDDGPAHANFFSSGGAGSNTHVDRRLHQLMHADVDADDDDGLD 251
Query: 164 GRV---------EDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 213
R RP VTV + E KDY+V+ ++ +DR KLLFDIVCTLTDM YVV
Sbjct: 252 SRAIVSGEAGNAAAAEERPVVTVEHCEEKDYSVVNVKCRDRSKLLFDIVCTLTDMHYVVS 311
Query: 214 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRV 273
H V++ QE YIR DG + + E RVI+CLEAAI RR SEG LELC DRV
Sbjct: 312 HASVSSDGIYGIQELYIRRKDGRTLQKD-EAGRVIKCLEAAISRRVSEGFTLELCGRDRV 370
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-K 332
GLLSD+TR+ RE+ L++ RA+++T+GG+ + FYV D +G PVD K I+ +R Q+GHT
Sbjct: 371 GLLSDVTRVLREHGLTVTRADVTTVGGQAINVFYVRDASGEPVDMKTIEGLRVQVGHTVM 430
Query: 333 LQVKR 337
L VK+
Sbjct: 431 LNVKK 435
>gi|302812986|ref|XP_002988179.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
gi|300143911|gb|EFJ10598.1| hypothetical protein SELMODRAFT_269367 [Selaginella moellendorffii]
Length = 482
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 166/399 (41%), Positives = 239/399 (59%), Gaps = 36/399 (9%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D DG KI D+EV+ +IQ+ + R S+G P +HT+IE +G +RP
Sbjct: 80 MDVFHVTDIDGNKITDEEVLKFIQEVCSAEG--GEITRVSLGTGP-HQHTAIELSGPNRP 136
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH-STGYAIKDPKRLSTIKELLFN 119
GL SEV + L+ ++CNV +A +WTHN R A ++ V + S+G I+D +L IK+ L
Sbjct: 137 GLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIFVDNACSSGGPIEDCDKLKDIKDRLCR 196
Query: 120 VLRGYDDFR---KAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKS----- 170
V+R D R +T+ G+ + ERRLHQ+M D D+ + + GR+ D++
Sbjct: 197 VIRANDGERGGGAGRTADFFSGLTHMERRLHQMMSADEDHSGESRELEGRLGDETEQRTV 256
Query: 171 ---SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
RP VTV N +E+ Y+V+ + +DR KLLFD VCTLTDM Y++FH + + AYQ
Sbjct: 257 NGKGRPAVTVRNCVERGYSVVNIHCRDRSKLLFDTVCTLTDMDYMIFHATILSEGYFAYQ 316
Query: 227 EFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFREN 286
EFYIRH DG + ++ ER+R+I+ L AAI+RR EGL LELCT DRVGLLSD+T++F +
Sbjct: 317 EFYIRHTDGCTLETDEERQRLIKRLVAAIQRRFPEGLRLELCTYDRVGLLSDVTKVFHRH 376
Query: 287 SLSIKRAEISTI-GGKVKDTFYVTD-VTGNPVDPKIIDSIRRQIGHTKLQVKRSTIL--- 341
L + RA +ST G V +TFYVTD +G+ VD + +++IR ++G L V+ + +
Sbjct: 377 GLCVTRAHVSTTRAGTVANTFYVTDAASGDAVDMRTVEAIREELGQAMLNVRSAPVCPQL 436
Query: 342 -----APKPPKETTTGFFLGNFFK---ARTFQTFKLIRS 372
+P P F L FFK R + LI S
Sbjct: 437 LGLDDSPSPR------FSLAAFFKLHSERILYSLGLITS 469
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N D TVI + S +R +L ++V LTD+ + V++ F++
Sbjct: 27 PRVVIENAAFTDATVIKLDSVNRHGILLEVVQVLTDLDLFISKAYVSSDAGWFMDVFHVT 86
Query: 232 HVDGLPISSEAERERVIQ---CLEAAIERRASEG------LELELCTEDRVGLLSDITRI 282
+DG I+ E E + IQ E R S G +EL +R GLLS++
Sbjct: 87 DIDGNKITDE-EVLKFIQEVCSAEGGEITRVSLGTGPHQHTAIELSGPNRPGLLSEVFST 145
Query: 283 FRENSLSIKRAEISTIGGKVKDTFYVTDV--TGNPVD 317
+ +++ A + T +V +V + +G P++
Sbjct: 146 LSSMNCNVRSAAVWTHNLRVAGMIFVDNACSSGGPIE 182
>gi|357113138|ref|XP_003558361.1| PREDICTED: uncharacterized protein LOC100843093 [Brachypodium
distachyon]
Length = 454
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 176/397 (44%), Positives = 232/397 (58%), Gaps = 39/397 (9%)
Query: 1 MDVFNVIDCDGKKIRDKE-VIDYIQQRLETDASFAPSLRSSVGV----MPTEEHTSIEFT 55
MDVF+V D G+K+ D + ++ ++ L A+ A +L G E + +E
Sbjct: 74 MDVFHVTDAAGRKVADADKLLARLESSLAAAAATADALPRPAGCDSSPAQNEGLSLLELI 133
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
G DRPGL SEV AVL DL C++V+A+ WTH R AA+V V D TG I D R I+
Sbjct: 134 GVDRPGLLSEVFAVLHDLRCSIVDAKAWTHGGRVAALVFVRDEDTGAPIDDAARTRRIES 193
Query: 116 LLFNVLRGYDDFRKAKTSL-SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQ 174
L VLRG R A+T L + N +RRLHQ++ +DR+ A GR + RP
Sbjct: 194 RLRYVLRG--GARGARTILVDAAAVGNLDRRLHQLLNEDRE------ADGR--PAADRPT 243
Query: 175 VTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
T + + E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYI
Sbjct: 244 TTAVAVQEWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYI 303
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 290
R +DG PISS AER+RVIQ L+AAIERRASEG+ LEL +DR GLL+ +TR+FRENSLS+
Sbjct: 304 RRLDGQPISSAAERQRVIQRLQAAIERRASEGVRLELSIKDRRGLLAYVTRVFRENSLSV 363
Query: 291 KRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETT 350
AEI+T G K + F+VTDV G P DPK ID + IG L+V + P+ +
Sbjct: 364 THAEITTRGDKALNVFHVTDVAGRPADPKAIDEVIHGIGTESLRVDEE-----RWPRLCS 418
Query: 351 TG-------------FFLGNFFKARTFQTFKLIRSYS 374
T F LG+ K + LIRS S
Sbjct: 419 TQGDAGRDGGAGGGLFSLGSLVK-KNLYNLGLIRSCS 454
>gi|302760087|ref|XP_002963466.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
gi|300168734|gb|EFJ35337.1| hypothetical protein SELMODRAFT_405352 [Selaginella moellendorffii]
Length = 503
Score = 281 bits (718), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 244/418 (58%), Gaps = 53/418 (12%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL-------------------RSSV 41
MDVF+V D DG KI D+EV+ +IQ+ LE A+ P + R S+
Sbjct: 80 MDVFHVTDIDGNKITDEEVLKFIQESLEKKAAEMPWIGSKCSNPSKVCSAEGGEITRVSL 139
Query: 42 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH-ST 100
G P +HT+IE +G +RPGL SEV + L+ ++CNV +A +WTHN R A ++ V + S+
Sbjct: 140 GTGP-HQHTAIELSGPNRPGLLSEVFSTLSSMNCNVRSAAVWTHNLRVAGMIFVDNACSS 198
Query: 101 GYAIKDPKRLSTIKELLFNVLRGYDDFR---KAKTSLSPPGIMNRERRLHQIMFDDRDYE 157
G I+D +L IK+ L V+R D R +T+ G+ + ERRLHQ+M D D+
Sbjct: 199 GGPIEDCDKLKDIKDRLCRVIRANDGERGGGAGRTAEFFSGLTHMERRLHQMMSADEDHC 258
Query: 158 RVEKAV-GRVEDKS--------SRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 207
+ + GR+ D++ RP VT+ N +E+ Y+V+ + +DR KLLFD VCTLTD
Sbjct: 259 GESRELEGRLCDETEQRTVNGKGRPTVTIRNCVERGYSVVNIHCQDRSKLLFDTVCTLTD 318
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELEL 267
M Y++FH + + AYQEFYIRH DG + ++ ER+R+I+ L AAI+RR EGL LEL
Sbjct: 319 MDYMIFHATILSEGYFAYQEFYIRHTDGCTLETDDERQRLIKRLVAAIQRRFPEGLRLEL 378
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD-VTGNPVDPKIIDSIR 325
CT DRVGLLSD+T++F + L + RA IST G V +TFYVTD +G+ VD + +++IR
Sbjct: 379 CTYDRVGLLSDVTKVFHRHGLCVTRAYISTTRAGTVANTFYVTDAASGDAVDMRTVEAIR 438
Query: 326 RQIGHTKLQVKRSTIL--------APKPPKETTTGFFLGNFFK---ARTFQTFKLIRS 372
++G L V+ + + +P P F L FFK R + LI S
Sbjct: 439 EELGQAMLNVRSAPVCPQLLGLDDSPSPR------FSLAAFFKLHSERILYSLGLITS 490
>gi|357149509|ref|XP_003575136.1| PREDICTED: uncharacterized protein LOC100839017 [Brachypodium
distachyon]
Length = 450
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 164/378 (43%), Positives = 230/378 (60%), Gaps = 23/378 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS-------SVGVMPTEEHTSIE 53
MDVF+V++ G+K+ D + I YI++ L ++ PS + SVG+ +HT+IE
Sbjct: 72 MDVFHVLNKQGQKVTDDKTIKYIEKALGPGSNL-PSAKKGGGSPGRSVGMHSIGDHTAIE 130
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DPKRLST 112
G DR GL SE+ AVLA+L CNV+ AE+WTH R A VV+V D +TG I D +R+++
Sbjct: 131 LKGPDRTGLLSEIFAVLAELQCNVLAAEVWTHRARVACVVYVNDVATGKPIDVDTRRMTS 190
Query: 113 IKELLFNVLRGY----DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
I+ L NVLRG+ +D A T + G + +RRLHQ+M D + + V D
Sbjct: 191 IEHRLRNVLRGHGGDDEDGTGAHTEFAV-GSTHVDRRLHQLMNADMELVDAQGEGEEVAD 249
Query: 169 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
V EKDY+V+ +R +DR KLLFDIVCTLTDMQYVV H V++ QE
Sbjct: 250 DGMSVTVGYCK-EKDYSVVNVRCRDRSKLLFDIVCTLTDMQYVVSHAAVSSDGLYGVQEL 308
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 288
+IR DG + + E ++V++CL+AAI RR SEG LE+C DRVGLLS++TR+ RE+ L
Sbjct: 309 FIRRKDGRTLLKD-EEDKVVKCLQAAISRRVSEGFTLEVCGRDRVGLLSEVTRVLREHGL 367
Query: 289 SIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHT-KLQVKRSTILAPKPPK 347
++ RA+++T+G + + FYV D +G VD K I+ +R QIG T L VK+ A KPP+
Sbjct: 368 TVTRADVATVGEQAMNVFYVRDASGQTVDMKTIEGLRGQIGQTVMLNVKKVPAPAVKPPE 427
Query: 348 E-----TTTGFF-LGNFF 359
TGFF G+ F
Sbjct: 428 PARGGVAKTGFFSFGSLF 445
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N + TV+ + S ++ +L ++V L+D+ + + + F++
Sbjct: 19 PRVCIDNDTMSECTVVKVDSMNKNGILLEVVQVLSDLDLTILKAYITSDGGWFMDVFHVL 78
Query: 232 HVDGLPISSEAERERVIQC------LEAAIERRASEG-----------LELELCTEDRVG 274
+ G ++ + + + + L +A + S G +EL DR G
Sbjct: 79 NKQGQKVTDDKTIKYIEKALGPGSNLPSAKKGGGSPGRSVGMHSIGDHTAIELKGPDRTG 138
Query: 275 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPVD 317
LLS+I + E ++ AE+ T +V YV DV TG P+D
Sbjct: 139 LLSEIFAVLAELQCNVLAAEVWTHRARVACVVYVNDVATGKPID 182
>gi|222639814|gb|EEE67946.1| hypothetical protein OsJ_25838 [Oryza sativa Japonica Group]
Length = 433
Score = 280 bits (715), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 224/374 (59%), Gaps = 29/374 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G K+ D VI YI+Q L T P+ +++ E T++E TG DR
Sbjct: 70 MDVFHVTDRLGCKLTDDSVITYIEQSLGT--WNGPARPAAL-----EGLTALELTGADRT 122
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+ L ++
Sbjct: 123 GLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEARLGHL 177
Query: 121 LRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
LRG A ++ + + ERRLHQ+M DRD E + S P V+V +
Sbjct: 178 LRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE---ERAAAAAAASPTPAVSVQS 234
Query: 180 -IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
E+ Y+V+T++ +DRPKLLFD+VCTLTDM YVVFHG ++T +A+QEFYIRH DG PI
Sbjct: 235 WAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGSPI 294
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SSEAER RV QCL+ AIERR+ EG+ LELCT DR LLSD+TR FREN L + +AE+ST
Sbjct: 295 SSEAERHRVSQCLQDAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQAEVSTK 354
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPPKETTTG--- 352
G + FYVTD G+ V+ ID++R+++G L + R + P++ G
Sbjct: 355 GDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDAVDGNGG 414
Query: 353 ------FFLGNFFK 360
F+LGNF K
Sbjct: 415 GGGIGLFYLGNFVK 428
>gi|218200397|gb|EEC82824.1| hypothetical protein OsI_27619 [Oryza sativa Indica Group]
Length = 433
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/374 (44%), Positives = 224/374 (59%), Gaps = 29/374 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G K+ D VI YI+Q L T P+ +++ E T++E TG DR
Sbjct: 70 MDVFHVTDRLGCKLTDDSVITYIEQSLGT--WNGPARPAAL-----EGLTALELTGADRT 122
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLAD+ C VV A WTH R +V + D D +R++ I+ L ++
Sbjct: 123 GLISEVFAVLADMDCAVVEARSWTHRGRLGCLVFLRDEEA-----DTERMARIEARLGHL 177
Query: 121 LRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
LRG A ++ + + ERRLHQ+M DRD E + S P V+V +
Sbjct: 178 LRGDSTGAGGAVAAVPAAAVAHAERRLHQLMSADRDQE---ERAAAAAAASPTPAVSVQS 234
Query: 180 I-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
E+ Y+V+T++ +DRPKLLFD+VCTLTDM YVVFHG ++T +A+QEFYIRH DG PI
Sbjct: 235 WAERGYSVVTVQCRDRPKLLFDVVCTLTDMDYVVFHGTIDTTGDQAHQEFYIRHADGSPI 294
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
SSEAER RV QCL+ AIERR+ EG+ LELCT DR LLSD+TR FREN L + +AE+ST
Sbjct: 295 SSEAERHRVSQCLQYAIERRSLEGVRLELCTPDRPALLSDVTRTFRENGLLVAQAEVSTK 354
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK---RSTILAPKPPKETTTG--- 352
G + FYVTD G+ V+ ID++R+++G L + R + P++ G
Sbjct: 355 GDMASNVFYVTDAAGHAVEQSAIDAVRQRVGMDCLVAREEHRPQLYQKAGPRDAVDGNGG 414
Query: 353 ------FFLGNFFK 360
F+LGNF K
Sbjct: 415 GGGIGLFYLGNFVK 428
>gi|357163126|ref|XP_003579632.1| PREDICTED: uncharacterized protein LOC100841900 [Brachypodium
distachyon]
Length = 474
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 173/404 (42%), Positives = 249/404 (61%), Gaps = 33/404 (8%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR-SSVGVMPTE------EHTSIE 53
MDVF V D DG+K+ D+ ++YIQ LE+D + R +S ++P+E +++SIE
Sbjct: 73 MDVFYVTDRDGEKVTDEATLNYIQTTLESDDCYYTEARDNSADIVPSESEEDSHQYSSIE 132
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DPKRLST 112
TGTDRPGL SEVCAVL+D+ C VV+A++WT N R AAVV V D +TG AI DP R++
Sbjct: 133 LTGTDRPGLLSEVCAVLSDVRCAVVSADLWTCNTRVAAVVQVADAATGVAISADPARVAE 192
Query: 113 IKELLFNVL--RGYDDFRKAKTSLSPPGI--MNRERRLHQIMFDDRDYERVEKAVGRVED 168
I L ++L R + A + P + M++ERRLHQ+M D + +E ++
Sbjct: 193 ISRRLAHLLRSRSWCHATVAASVAEEPSLVAMHKERRLHQLMAADPESGVIEGDGAYLQP 252
Query: 169 KSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT---GR 221
TV+ + ++ YT + +R +D PKLLFD VCT+TD QYVV+HG V+T G
Sbjct: 253 APGTTPATVVEVTDCAQRGYTFVVVRCRDVPKLLFDTVCTITDAQYVVYHGNVSTEPDGV 312
Query: 222 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITR 281
T AYQE+Y+R+ GL ++E ER + + LEAA+ERR ++G+ELE+ + DR GLLSD+TR
Sbjct: 313 T-AYQEYYVRNKAGLA-ATEPERLLLKRQLEAAVERRFADGIELEVRSGDRAGLLSDVTR 370
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVTDVTG--NPVDPKIIDSIRRQIGHTKLQVKRST 339
I REN L+I RA + + GG+ DTFYV+D G PV+P+ ID+IR QIG L+VK++
Sbjct: 371 IIRENGLTILRAGVKSQGGEAVDTFYVSDPMGLDYPVEPRTIDTIRAQIGEATLRVKKNP 430
Query: 340 ILAPKPPKET---------TTGFFLGNFFK-ARTFQTFKLIRSY 373
++ F LG+ +K R FQ+ L++ Y
Sbjct: 431 FADADQQQQQHDAAASVVGAIAFILGSVYKFYRPFQSLALVKLY 474
>gi|449508537|ref|XP_004163340.1| PREDICTED: uncharacterized protein LOC101229243 [Cucumis sativus]
Length = 476
Score = 276 bits (707), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 152/346 (43%), Positives = 217/346 (62%), Gaps = 22/346 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAPS---LRSSVGVMPTEEHTSIEFTG 56
MDVF+V D G K+ D+ +I YI+Q L + +P + ++ + + EHT+ E TG
Sbjct: 78 MDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEHTAAEITG 137
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVL +L CNV A WTH+ +AA+++++ + G IKD KRL+ ++E
Sbjct: 138 IDRPGLLSEIFAVLVELGCNVTAAVAWTHHKKAASIIYIEEGWNGGMIKDSKRLAHVQEQ 197
Query: 117 LFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS--- 170
L NV+ G + K + G + ERRLHQ+M+ + DYE+ R D S
Sbjct: 198 LENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQC-----RCHDDSKSC 252
Query: 171 ----SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
+R V + + EK Y++I +RS+DRPKLLFD VC LTD+QYVVFH V++ T AY
Sbjct: 253 KMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVSSNGTVAY 312
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRE 285
QE++IR G + SE+ER+R++Q L AAIERR S GL LELC +RVGLLSDITR+FRE
Sbjct: 313 QEYFIRQKGGCILDSESERKRLLQALVAAIERRVSHGLRLELCALNRVGLLSDITRVFRE 372
Query: 286 NSLSIKRAEISTIGGKVKDTFYVTDVTGN--PVDPKIIDSIRRQIG 329
N SI ++ T G + + ++TD +G+ VDP I+D + ++IG
Sbjct: 373 NGFSISTMDVKTNGKRAIGSIFITDASGHDVDVDPHILDLVLKEIG 418
>gi|226491840|ref|NP_001142557.1| uncharacterized protein LOC100274815 [Zea mays]
gi|195606406|gb|ACG25033.1| hypothetical protein [Zea mays]
Length = 372
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 165/385 (42%), Positives = 215/385 (55%), Gaps = 24/385 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V+D G K+ D + RLE+ S T +E G DRP
Sbjct: 1 MDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAGAGTPTLLELVGADRP 57
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++ L +V
Sbjct: 58 GLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLRHV 117
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
LRG A+ + +N +RRLHQ++ +D + G D++ P T + +
Sbjct: 118 LRG--GALGARMVRADAAAVNMDRRLHQLLNEDGE-------AGSRADQAEAPTPTAVAV 168
Query: 181 ----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR +D
Sbjct: 169 QDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDER 228
Query: 237 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
PISS ER RVIQCL+AAIERRASEG+ LEL DR GLL+ +TR+FRENSLS+ A I+
Sbjct: 229 PISSATERRRVIQCLQAAIERRASEGVRLELRINDRRGLLAYVTRVFRENSLSVTHAVIT 288
Query: 297 TIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR-------STILAPKPPKET 349
T G + F+VTDV G P DPK ID + ++IG L+V ST
Sbjct: 289 TRGDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEGDAGRGGGG 348
Query: 350 TTGFFLGNFFKARTFQTFKLIRSYS 374
F LG+ K + + LIRS S
Sbjct: 349 AGIFSLGSLVK-KNLVSLGLIRSCS 372
>gi|449451315|ref|XP_004143407.1| PREDICTED: uncharacterized protein LOC101215529 [Cucumis sativus]
Length = 476
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 151/346 (43%), Positives = 216/346 (62%), Gaps = 22/346 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL-ETDASFAPS---LRSSVGVMPTEEHTSIEFTG 56
MDVF+V D G K+ D+ +I YI+Q L + +P + ++ + + EHT+ E TG
Sbjct: 78 MDVFHVTDQFGNKLTDESLIHYIKQALCASRKEGSPRKVRMCNTGKELLSPEHTAAEITG 137
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
DRPGL SE+ AVL +L CN+ A WTH+ +AA+++++ + G IKD KRL+ ++E
Sbjct: 138 IDRPGLLSEIFAVLVELGCNITAAVAWTHHKKAASIIYIEEGWNGGMIKDSKRLAHVQEQ 197
Query: 117 LFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED--KSS 171
L NV+ G + K + G + ERRLHQ+M+ + DYE+ R D KS
Sbjct: 198 LENVVDAHNGQGETSSVKLTAPSAGWTHPERRLHQLMYANGDYEQC-----RCHDDSKSC 252
Query: 172 RPQVTVLNI------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
+ T ++ EK Y++I +RS+DRPKLLFD VC LTD+QYVVFH V++ T AY
Sbjct: 253 KMSCTRTHVKIESCKEKGYSIINIRSRDRPKLLFDTVCALTDLQYVVFHAAVSSNGTVAY 312
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRE 285
QE++IR G + SE ER+R++Q L AAIERR S GL LELC +RVGLLSDITR+FRE
Sbjct: 313 QEYFIRQKGGCILDSECERKRLLQALVAAIERRVSHGLRLELCALNRVGLLSDITRVFRE 372
Query: 286 NSLSIKRAEISTIGGKVKDTFYVTDVTGN--PVDPKIIDSIRRQIG 329
N SI ++ T G + + ++TD +G+ VDP I+D + ++IG
Sbjct: 373 NGFSISTMDVKTNGKRAIGSIFITDASGHDVDVDPHILDLVLKEIG 418
>gi|414865819|tpg|DAA44376.1| TPA: ACR8 [Zea mays]
Length = 440
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/384 (43%), Positives = 224/384 (58%), Gaps = 27/384 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYI---QQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGT 57
MDVF+V D G+K+ D + + + L DA + ++ PT +E G
Sbjct: 74 MDVFHVTDAAGRKVADADADALLARLESSLSADALPPRTPPAAAAGTPT----LLELVGA 129
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL SEV AVL DL C++ +A WTH R AA+V V D TG I D R+ ++ L
Sbjct: 130 DRPGLLSEVFAVLHDLRCDIADARAWTHGGRVAALVFVRDEDTGAPIDDAARVRRVESRL 189
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVG-RVEDKSSRPQV 175
+VLRG A+ + +N +RRLHQ++ +D + E R ++A V+D
Sbjct: 190 RHVLRG--GALGARMVRADAAAVNMDRRLHQLLNEDGEAESRADQATAVAVQDWG----- 242
Query: 176 TVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR +DG
Sbjct: 243 -----ERGYSVLTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRLDG 297
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
PISS AER RVIQCL+AAIERRASEG+ LEL DR GLL+ +TR+FRENSLS+ AEI
Sbjct: 298 RPISSAAERRRVIQCLQAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEI 357
Query: 296 STIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVK-----RSTILAPKPPKETT 350
+T G + F+VTDV G P DPK ID + ++IG L+V R + +
Sbjct: 358 TTRGDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCLTEGDAGRGGA 417
Query: 351 TGFFLGNFFKARTFQTFKLIRSYS 374
F LG+ K + + LIRS S
Sbjct: 418 GIFSLGSLVK-KNLASLGLIRSCS 440
>gi|195639256|gb|ACG39096.1| ACR8 [Zea mays]
Length = 450
Score = 275 bits (702), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 168/386 (43%), Positives = 218/386 (56%), Gaps = 21/386 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI-EFTGTDR 59
MDVF+V+D G K+ D + RLE+ S ++ E G DR
Sbjct: 74 MDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAAGAGTPTLLELVGADR 130
Query: 60 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119
PGL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++ L +
Sbjct: 131 PGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLRH 190
Query: 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
VLRG A+ + +N +RRLHQ++ + D E +A R E ++ P T +
Sbjct: 191 VLRG--GALGARMVRADASAVNMDRRLHQLL--NEDGEAGSRA-DRAESEAEAPTPTAVA 245
Query: 180 I----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
+ E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR +D
Sbjct: 246 VQDWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDE 305
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
PISS ER RVIQCLEAAIERRASEG+ LEL DR GLL+ +TR+FRENSLS+ AEI
Sbjct: 306 RPISSATERRRVIQCLEAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEI 365
Query: 296 STIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKR-------STILAPKPPKE 348
+T G + F+VTDV G P DPK ID + ++IG L+V ST
Sbjct: 366 TTRGDMAMNVFHVTDVAGRPADPKTIDEVIQRIGTESLRVDEERWPRLCSTEGDAGRGGG 425
Query: 349 TTTGFFLGNFFKARTFQTFKLIRSYS 374
F LG+ K + + LIRS S
Sbjct: 426 GAGIFSLGSLVK-KNLVSLGLIRSCS 450
>gi|242080357|ref|XP_002444947.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
gi|241941297|gb|EES14442.1| hypothetical protein SORBIDRAFT_07g001810 [Sorghum bicolor]
Length = 443
Score = 274 bits (700), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 161/350 (46%), Positives = 216/350 (61%), Gaps = 20/350 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G+K+ D VI YIQQ L T P+ +++ E T++E TG DR
Sbjct: 70 MDVFHVTDRLGRKLTDDSVITYIQQSLGT--WNEPARPAAL-----EGLTALELTGPDRT 122
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV--TDHSTGYAIKDPKRLSTIKELLF 118
GL SEV AVLAD+ C+VV+A WTH R A VV + + ++G + D R++ I L
Sbjct: 123 GLLSEVFAVLADMQCSVVDARAWTHRGRLACVVFLRGEELASGASADDDDRVARILARLG 182
Query: 119 NVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL 178
++LRG + A ++ G+ + +R LHQ+M D D A + P V+V
Sbjct: 183 HLLRGDGEAPGAVAAVPAAGVAHADRCLHQLMAADLDRAPSFPA------PALSPAVSVQ 236
Query: 179 N-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 237
+ E+ Y+V+T+ +DRPKLLFD+VCTL DM YVVFHG V+T A QEFYIR DG P
Sbjct: 237 SWAERGYSVVTVLCRDRPKLLFDVVCTLHDMDYVVFHGTVDTAGDRARQEFYIRRADGSP 296
Query: 238 ISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297
I SEAERER+ QCL+AAIERR+ EG+ LELCT DR GLLS++TR FREN L + +AE+ST
Sbjct: 297 IRSEAERERLNQCLQAAIERRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVVQAEVST 356
Query: 298 IGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK 347
G + FYVTD G D ID++R ++G +L V P+PP+
Sbjct: 357 KGDLASNVFYVTDAAGKAADQSAIDAVRERVGMDRLVVSEE----PRPPQ 402
>gi|255635655|gb|ACU18177.1| unknown [Glycine max]
Length = 245
Score = 273 bits (698), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/243 (58%), Positives = 186/243 (76%), Gaps = 3/243 (1%)
Query: 90 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQI 149
A+VV++TD +TG +I DP RL+ IK+LL VL+G D + A T++S G +++RRLHQ+
Sbjct: 2 ASVVYITDEATGLSIDDPDRLAKIKQLLLYVLKGDIDKKSANTAVSV-GSTHKDRRLHQL 60
Query: 150 MFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDM 208
M+ DRDY+ + G D++ + VTV + I+K YTV+ +R DRPKLLFD VCTLTDM
Sbjct: 61 MYADRDYDVDDGDSGSTSDRN-KLLVTVDDCIDKGYTVVNLRCPDRPKLLFDTVCTLTDM 119
Query: 209 QYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELC 268
QYVV+HG V EAYQE+YIRHVDG PISSEAER+RVI CLEAA+ RR SEG++LELC
Sbjct: 120 QYVVYHGTVIAEGPEAYQEYYIRHVDGSPISSEAERQRVIHCLEAAVRRRTSEGIKLELC 179
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 328
EDRVGLLSD+TRIFREN LS+ RAE++T G + + FYVTDV+GNPV + I+++R++I
Sbjct: 180 GEDRVGLLSDVTRIFRENGLSVNRAEVTTRGSQAMNVFYVTDVSGNPVKSETIETVRKEI 239
Query: 329 GHT 331
G T
Sbjct: 240 GLT 242
>gi|356541590|ref|XP_003539257.1| PREDICTED: uncharacterized protein LOC100811109 [Glycine max]
Length = 459
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 159/384 (41%), Positives = 226/384 (58%), Gaps = 35/384 (9%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVGVMPTE-----EHT 50
MDVF+V D GKK+ D+ ++ +IQQ L + + S L S G + E+T
Sbjct: 76 MDVFHVTDEAGKKLTDETLMLHIQQELCATRSKGEISRDTELASQKGAQAQQQNVAMENT 135
Query: 51 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 110
++E + TDR GL SE+ AVL +L +V +A WTHNDR A ++ + D S+ I DPKRL
Sbjct: 136 ALEMSVTDRAGLLSELSAVLVELGYSVTSATAWTHNDRVACIIFLEDASSPGPISDPKRL 195
Query: 111 STIKELLFNVLRGYDDF---RKAKTSLSPPGIMNRERRLHQIMFDDRDYE------RVEK 161
++E L NV+ + + + + G + ERRLHQ+M+ DRDYE R
Sbjct: 196 GLVEEQLENVVAAHGETGQKNSVRVTTLGTGRTHTERRLHQLMYADRDYESCRACDRTHV 255
Query: 162 AVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 221
+VGR EDK Y V+ +RS+DRPKLLFD VC LTDMQYVVFH +++ R
Sbjct: 256 SVGRCEDKG-------------YLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAISSKR 302
Query: 222 TEAYQEFYIRHVDG-LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDIT 280
+ A QE++IRH G L + SE+E E + CL AAIERR S GL +++ TE+R+GLLS++T
Sbjct: 303 SMADQEYFIRHCKGSLALPSESETEELTLCLIAAIERRVSRGLMVDIRTENRMGLLSNVT 362
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRST- 339
R+FREN LSI R EI T G K +F+VTD +G V+P I++ +R+ G + + +S
Sbjct: 363 RVFRENGLSISRFEIGTEGEKAVGSFFVTDSSGEQVNPNIVELVRQASGGSVVTDHKSPH 422
Query: 340 -ILAPKPPKETTTGFFLGNFFKAR 362
+ + E F LG+ +R
Sbjct: 423 RVRQSQSDIEAKPKFSLGSLLWSR 446
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 75/180 (41%), Gaps = 24/180 (13%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N +D TV+ + S +R +L ++V LTD+ ++ +++ F++
Sbjct: 23 PRVCIDNDSCRDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYISSDGGWCMDVFHVT 82
Query: 232 HVDGLPISSEAERERVIQCL---------------------EAAIERRASEGLELELCTE 270
G ++ E + Q L +A + A E LE+
Sbjct: 83 DEAGKKLTDETLMLHIQQELCATRSKGEISRDTELASQKGAQAQQQNVAMENTALEMSVT 142
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT--GNPVDPKIIDSIRRQI 328
DR GLLS+++ + E S+ A T +V ++ D + G DPK + + Q+
Sbjct: 143 DRAGLLSELSAVLVELGYSVTSATAWTHNDRVACIIFLEDASSPGPISDPKRLGLVEEQL 202
>gi|242061954|ref|XP_002452266.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
gi|241932097|gb|EES05242.1| hypothetical protein SORBIDRAFT_04g022677 [Sorghum bicolor]
Length = 422
Score = 270 bits (689), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 161/360 (44%), Positives = 218/360 (60%), Gaps = 31/360 (8%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRS-----SVGVMPTEEHTSIEFT 55
MDVF+V+D G+KI D + I YI++ L +++ S SVG+ +HT+IE
Sbjct: 34 MDVFHVVDKQGQKITDDKTIKYIEKALGPESNLLCPKASNKQGRSVGLHSIGDHTAIELK 93
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
G DR GL SE+ AVLADL CNV+ AE+WTH R A VV+V D +TG AI DP R+S I+
Sbjct: 94 GPDRTGLLSEIFAVLADLQCNVLAAEVWTHRMRVACVVYVNDVATGLAIDDPGRVSRIEN 153
Query: 116 LLFNVLR----------------GYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 159
L +VLR + +F A S +P + +RRLHQ+M D D
Sbjct: 154 RLRHVLRGYGGGGGGNDDDDGSGAHANFTDA--SSTPHHL---DRRLHQLMHADVDVAPA 208
Query: 160 EKAVGRVEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
+ RP+VTV + E K Y+V+ ++ +DR KLLFDIVCTLTDM+YVVFH V+
Sbjct: 209 AALA--AGGQGDRPEVTVEHCEEKSYSVVNVKCRDRSKLLFDIVCTLTDMEYVVFHAAVS 266
Query: 219 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSD 278
+ QE YIR DG + + E E+VI+ LEAAI RR SEG LE+ DRVGLLSD
Sbjct: 267 SEANYGIQELYIRRKDGKTLLKD-EAEKVIRSLEAAISRRVSEGFTLEVRGRDRVGLLSD 325
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTK-LQVKR 337
+TR+ RE+ L++ RA+++T GG+ + FYV D +G PVD K ++ +R Q G T L VK+
Sbjct: 326 VTRVLREHGLTVSRADVTTEGGQATNVFYVRDPSGQPVDMKTVEGLRGQFGQTAMLNVKK 385
>gi|297742910|emb|CBI35746.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 267 bits (682), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 142/312 (45%), Positives = 200/312 (64%), Gaps = 18/312 (5%)
Query: 63 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 122
SE+ AVLA+L C+V A WTHN R A ++ + D G I+DP+RL ++E L NV+
Sbjct: 1 MSEISAVLAELSCHVTAAVAWTHNSRVACIICLEDELKGGPIRDPERLVHVEEQLENVVE 60
Query: 123 G-YDDFRKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
+ + K L+ P G + +RRLHQ+MF D+DYER G + S R QV++ N
Sbjct: 61 ARHQSGERRKVRLTAPVAGRTHTDRRLHQLMFADKDYER---CCGGCDGSSDRIQVSIEN 117
Query: 180 I-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
EK Y+V+ ++S+DRPKLLFD VCTLTDMQYVVFH V++ + A QE++IR +DG +
Sbjct: 118 CKEKGYSVVNVKSRDRPKLLFDTVCTLTDMQYVVFHAAVSSKGSIAVQEYFIRQMDGCTL 177
Query: 239 SSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI 298
+E+ER RV QCL AAIERR + GL L++ ++R+GLLSDITR+FREN LSI+ AEI
Sbjct: 178 GTESERNRVAQCLIAAIERRVTHGLRLDIRIKNRLGLLSDITRVFRENGLSIRMAEIGIH 237
Query: 299 GGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTI---LAPKPPKETTTG--- 352
G + +FYVTDV+G V P ++ IR++IG T + V +S++ L P ++ +T
Sbjct: 238 GERASGSFYVTDVSGRDVSPNTVELIRKEIGGTIMAVNKSSVPPSLPASPSRDRSTASSV 297
Query: 353 -----FFLGNFF 359
F LG +
Sbjct: 298 ENRPRFSLGTLW 309
>gi|356497013|ref|XP_003517359.1| PREDICTED: uncharacterized protein LOC100781435 [Glycine max]
Length = 477
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 150/347 (43%), Positives = 221/347 (63%), Gaps = 20/347 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL--------ETDASFAPSLRSSVGVMPTEEHTSI 52
MDVF+V D GKK+ D+ ++ +IQQ + +T+ + ++ +P +E+T++
Sbjct: 76 MDVFHVTDEAGKKLTDETLMLHIQQVIVSKREISRDTEMVSQKAPQAQQQNVP-KENTAL 134
Query: 53 EFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLST 112
E + TDRPGL SE+ AVL +L C+V +A WTHNDR A ++ + D S+ I DP+RL
Sbjct: 135 EMSVTDRPGLLSELSAVLVELGCSVTSAMAWTHNDRVACIIFLEDASSPGPISDPERLGL 194
Query: 113 IKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
++E L NV+ + + + K T+L G + ERRLHQ+M+ DRDYE G
Sbjct: 195 VEEQLENVVAAHGETGQKKSVRVTTLGT-GRTHTERRLHQLMYADRDYESCRACDGDSSG 253
Query: 169 KSSR----PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
+ + V+V E K Y V+ +RS+DRPKLLFD VC LTDMQYVVFH +++ R+
Sbjct: 254 EHKKGCDGTHVSVGRCEDKGYLVVNVRSRDRPKLLFDTVCVLTDMQYVVFHAAISSKRSM 313
Query: 224 AYQEFYIRHVDG-LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRI 282
A+QE++IR+ G L + SE E+E + CL AAIERR S GL +++ T++R+GLLS++TR+
Sbjct: 314 AHQEYFIRNCKGSLALPSEREKEELTLCLIAAIERRVSHGLMVDIRTDNRMGLLSNVTRV 373
Query: 283 FRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 329
FREN LSI R EI T G K +F+VTD +G V+P I++ +R+ G
Sbjct: 374 FRENGLSISRFEIGTEGEKAVGSFFVTDSSGEEVNPDIVELVRQASG 420
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 73/177 (41%), Gaps = 21/177 (11%)
Query: 173 PQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N D TV+ + S +R +L ++V LTD+ ++ +++ F++
Sbjct: 23 PRVCIENDSCPDCTVVKVDSANRKGILLEMVQVLTDLDLIISKSYISSDGGWCMDVFHVT 82
Query: 232 HVDGLPISSEAERERVIQCL------------------EAAIERRASEGLELELCTEDRV 273
G ++ E + Q + +A + E LE+ DR
Sbjct: 83 DEAGKKLTDETLMLHIQQVIVSKREISRDTEMVSQKAPQAQQQNVPKENTALEMSVTDRP 142
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT--GNPVDPKIIDSIRRQI 328
GLLS+++ + E S+ A T +V ++ D + G DP+ + + Q+
Sbjct: 143 GLLSELSAVLVELGCSVTSAMAWTHNDRVACIIFLEDASSPGPISDPERLGLVEEQL 199
>gi|357139522|ref|XP_003571330.1| PREDICTED: uncharacterized protein LOC100825212 [Brachypodium
distachyon]
Length = 456
Score = 261 bits (666), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 170/395 (43%), Positives = 227/395 (57%), Gaps = 36/395 (9%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPT------EEHTSIEF 54
MDVF+V D G+K+ D VI YIQQ L + VG+ P+ E T +E
Sbjct: 77 MDVFHVTDRRGRKLTDHSVISYIQQSLA-------AWNGPVGIDPSASAAGMEGLTVLEL 129
Query: 55 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 114
TG DR GL SEV AVLAD+ C VV+A W+H R A +V++ D A + I+
Sbjct: 130 TGADRTGLISEVFAVLADMGCGVVDARAWSHRGRLACLVYLRDADVAAAGA-----ARIE 184
Query: 115 ELLFNVLRGY---DDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L +LRG + F + + P + + +RRLHQ+M E ++ E
Sbjct: 185 ARLTPLLRGAAAAEPFSDSSVVAAVPACSVSHPDRRLHQLMHAAAAREHDDRRASPSE-- 242
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQE 227
+ P V+V + E+ Y+V+T++ DRPKLL+D+VCTLTDM YVVFHG V+T + A QE
Sbjct: 243 ADTPSVSVESWAERGYSVVTVQCGDRPKLLYDVVCTLTDMDYVVFHGTVDTSASGGARQE 302
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 287
FYIR DG PISS+AE RV CL+ AIERR+ EG+ LELCT DR GLLSD+TR FREN
Sbjct: 303 FYIRSADGSPISSDAEMRRVSLCLQDAIERRSFEGVRLELCTPDRPGLLSDVTRTFRENG 362
Query: 288 LSIKRAEISTIGGKVKDTFYVTDVT-GNPVDPKIIDSIRRQIGHTKLQV-KRSTILAPKP 345
L + +AE+ST G + FYVT T G V ID++R ++G L V +R L K
Sbjct: 363 LLVAQAEVSTKGDMASNVFYVTGTTAGQAVHRSAIDAVREKVGVDSLVVEERPPQLHQKE 422
Query: 346 --PKETTTG----FFLGNFFKARTFQTFKLIRSYS 374
P + + G F+LGN FK R + LI+S+S
Sbjct: 423 TRPADRSDGGLGLFYLGNLFK-RNLYSLGLIKSFS 456
>gi|388512679|gb|AFK44401.1| unknown [Lotus japonicus]
Length = 224
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/227 (57%), Positives = 169/227 (74%), Gaps = 4/227 (1%)
Query: 149 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTD 207
+MF DRDYERV+ D+ RP VTV+N +KDY+V+T+ SKDRPKLLFD VCTLTD
Sbjct: 1 MMFADRDYERVDDDDF---DEKQRPNVTVVNWSDKDYSVVTIISKDRPKLLFDTVCTLTD 57
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELEL 267
MQYVVFH ++ +AYQE+YIRH+DG P+ S+AER+RVIQCLEAAIERR SEGL+LEL
Sbjct: 58 MQYVVFHANIDAEGPQAYQEYYIRHIDGSPVKSDAERQRVIQCLEAAIERRVSEGLKLEL 117
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQ 327
CT DRVGLLS++TRIFRENSL++ RAE++T G K +TFYV+ +G VD K I+SIR+
Sbjct: 118 CTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVSGASGYLVDSKTIESIRQA 177
Query: 328 IGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 374
IG+T L+VK + +++ T FK+R+F F L++SYS
Sbjct: 178 IGNTILKVKGTPDELKSTHQDSPTRSLFSGLFKSRSFVNFGLVKSYS 224
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 11/112 (9%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
E +E TDR GL S V + + V AE+ T D+A +V+ S GY + D
Sbjct: 111 EGLKLELCTTDRVGLLSNVTRIFRENSLTVTRAEVTTKGDKAVNTFYVSGAS-GYLV-DS 168
Query: 108 KRLSTIKELLFNVL---RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 156
K + +I++ + N + +G D K+ SP R L +F R +
Sbjct: 169 KTIESIRQAIGNTILKVKGTPDELKSTHQDSPT------RSLFSGLFKSRSF 214
>gi|357140136|ref|XP_003571626.1| PREDICTED: uncharacterized protein LOC100823992 [Brachypodium
distachyon]
Length = 470
Score = 260 bits (665), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 157/386 (40%), Positives = 225/386 (58%), Gaps = 25/386 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSS--VGVMP--TEEHTSIEFTG 56
+DVF+V D +G K+ +K+ I YI+Q + T + ++R S P +T IE G
Sbjct: 75 LDVFHVKDQEGSKVYNKKAISYIEQAICTREARRFTVRGSNEFASRPDVAAHYTEIEMIG 134
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
+RPG+FSE+ AVLA+ CNV+ A W+H D A V V+D ST I D RL+TI++
Sbjct: 135 HNRPGIFSEISAVLAEEGCNVIEAHAWSHKDSLACVAFVSDESTSSPINDRNRLATIEDH 194
Query: 117 LFNVLRGY----DDFRKAKTSL-SPPGIMNR-ERRLHQIMFDDRDYERVEKAV------- 163
L VLR DD R A+ L G+ + ERRLHQ+MF RD++ V
Sbjct: 195 LGTVLRSGTSMDDDQRSARAHLLGVDGLTSHPERRLHQLMFASRDFDGQPGQVSTAFPML 254
Query: 164 ---GRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
G +DKS+ + N EK Y+V+ + DRPKL+FD VCTLTDMQ+ VFH V++
Sbjct: 255 SLDGYKKDKSTVVSLDRCN-EKGYSVVNVECVDRPKLMFDTVCTLTDMQFNVFHASVSSQ 313
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDR-VGLLSDI 279
A QE+YIRH DG + + E+ V++ L+AA+ERR EG++LELCTE + VG LS I
Sbjct: 314 GPFACQEYYIRHKDGHMLDTADEKCLVVKGLKAAVERRTCEGVKLELCTEKKNVGFLSHI 373
Query: 280 TRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRST 339
TR+ RE+ L++ RA+I+ G K+TFYV D++GN +D ++S+RR++ QVK
Sbjct: 374 TRVLRESGLTVTRADIAMDGDVTKNTFYVKDISGNKIDMNAVESVRRELEPLPFQVKDEL 433
Query: 340 ILAPKP---PKETTTGFFLGNFFKAR 362
+ P P GF + K++
Sbjct: 434 LSPGLPEGNPASERNGFCILGMLKSK 459
>gi|413941729|gb|AFW74378.1| hypothetical protein ZEAMMB73_033208 [Zea mays]
Length = 443
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/349 (43%), Positives = 197/349 (56%), Gaps = 16/349 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G+K+ D VI YIQQ L T A + P E T++E TG R
Sbjct: 70 MDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAA-------APPEGLTALELTGPGRA 122
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLAD+ C V +A W H R A V H+ R+S I L ++
Sbjct: 123 GLLSEVFAVLADMQCGVADARAWAHRGRLACVAHLRADDP-ADGDGDGRVSRILARLSHL 181
Query: 121 LRG-YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
LRG A ++ G+ + +RRLHQ+M D R V + V
Sbjct: 182 LRGDGVVAPGAVAAVPASGVAHADRRLHQLM--SADLHRAAPVPVPVPALAPAVSVQSWA 239
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
E+ Y+V+T++ DRPKLLFD+ CTL DM YVVFHG V+T A QEFYIR DG PI
Sbjct: 240 -ERGYSVVTVQCGDRPKLLFDVACTLHDMDYVVFHGTVDTAAGRARQEFYIRRADGSPIR 298
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAERE + L+AAIERR+ EG+ LELC DR GLLS++TR FREN L + +AE+ST G
Sbjct: 299 SEAEREMLTHHLQAAIERRSLEGVRLELCAPDRAGLLSEVTRTFRENGLLVAQAEVSTKG 358
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKE 348
+ + FYVTD G D ID++R ++G +L V P+PP++
Sbjct: 359 DQACNVFYVTDAAGKAPDRGAIDAVRERVGADRLVVSEE----PRPPQQ 403
>gi|357148614|ref|XP_003574833.1| PREDICTED: uncharacterized protein LOC100821029 [Brachypodium
distachyon]
Length = 472
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 171/398 (42%), Positives = 232/398 (58%), Gaps = 29/398 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRSSVGVMPTEEHTSIEFTGTD 58
MDVF+V+D +G K+ D +VID I+Q L + SF A + + T+IE G D
Sbjct: 80 MDVFHVVDEEGNKLYDGQVIDRIEQSLGAGSLSFRATDAETETAAAAMAQATAIELVGRD 139
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK---DPKRLSTIKE 115
RPGL SEV AVL +L CN+ ++E+WTH+ R AA+V VTD TG I+ DP+RL T+K
Sbjct: 140 RPGLLSEVFAVLTNLRCNIASSEVWTHDGRMAALVRVTDADTGAGIEEDDDPERLDTVKR 199
Query: 116 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD-RDYERVEKAVGRVEDKSSRPQ 174
LL +VLRG +A P G ++ RRLHQ+M D R A E+
Sbjct: 200 LLRHVLRG-----RAAVQARPGGALHAHRRLHQMMSADLRSRAAAAGAGDEEEEDCEGVV 254
Query: 175 VTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
V V E+ YTV+ +R +DR KLLFD VCTLTDMQYVVFHG V +EAYQEFYIRH+
Sbjct: 255 VGVEECAERGYTVVNVRCRDRAKLLFDTVCTLTDMQYVVFHGTVIAEGSEAYQEFYIRHL 314
Query: 234 DGLPISSEAERERVI--QCLEAAIERRASEG-LELELCTEDRVGLLSDITRIFRENSLSI 290
D +S + +R +CL+AAI+RR +EG + LEL EDR GLLSD+TR+FRE+ LS+
Sbjct: 315 DDGAAASASAADRARLRRCLQAAIQRRNTEGVVGLELRCEDRPGLLSDVTRVFREHGLSV 374
Query: 291 KRAEISTIGGKVKDTFYVTDVTGN-PVDPKIIDSIRRQIGHTKLQVKRSTILA------- 342
AE++T G + D F V +G+ PV + +D++R ++G L +K T+ A
Sbjct: 375 THAEVATWGTQAADVFRVVTASGDAPVPARAVDAVRAEVGEDILFIKDDTLAASANAVGG 434
Query: 343 ---PKPPKETTTGFFLGNFFKARTFQ---TFKLIRSYS 374
P LGN ++R+ + LIRS S
Sbjct: 435 PVSPTGRGGGDGRRSLGNMIRSRSEKFLFNLGLIRSCS 472
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 173 PQVTVLNIEKDYT--VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
P+VTV N E D T ++ + S ++ L ++V LTD++ + +++ F++
Sbjct: 27 PRVTVDN-ESDITATLVKVDSANKYGTLLEVVQVLTDLKLTINRAYISSDGEWFMDVFHV 85
Query: 231 RHVDGLPISSEAERERVIQCLEAA-------------IERRASEGLELELCTEDRVGLLS 277
+G + +R+ Q L A ++ +EL DR GLLS
Sbjct: 86 VDEEGNKLYDGQVIDRIEQSLGAGSLSFRATDAETETAAAAMAQATAIELVGRDRPGLLS 145
Query: 278 DITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPV----DPKIIDSIRRQIGH 330
++ + +I +E+ T G++ VTD TG + DP+ +D+++R + H
Sbjct: 146 EVFAVLTNLRCNIASSEVWTHDGRMAALVRVTDADTGAGIEEDDDPERLDTVKRLLRH 203
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G L ++ ++ + L+I RA IS+ G D F+V D GN + D ++ID I +
Sbjct: 46 SANKYGTLLEVVQVLTDLKLTINRAYISSDGEWFMDVFHVVDEEGNKLYDGQVIDRIEQS 105
Query: 328 IGHTKLQVK 336
+G L +
Sbjct: 106 LGAGSLSFR 114
>gi|357482521|ref|XP_003611547.1| ACT domain-containing protein [Medicago truncatula]
gi|355512882|gb|AES94505.1| ACT domain-containing protein [Medicago truncatula]
Length = 486
Score = 254 bits (650), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 211/352 (59%), Gaps = 25/352 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQ--------------QRLETDASFAPSLRSSVGVMPT 46
MDVF+V D GKK+ D+ ++ I+ + L+ A ++ S S V +
Sbjct: 76 MDVFHVTDQAGKKLTDRNLMHQIEKELCATRAKEDIDDEELQGCAEYSQSKYSKQIV--S 133
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E+T++E +G DRPGL SE+ AVL ++ CNV +A WTHN R A +++V + S I+D
Sbjct: 134 TENTALEMSGMDRPGLLSEISAVLVNMSCNVTSATAWTHNGRVACILYVEEASKPGPIRD 193
Query: 107 PKRLSTIKELLFNVLRGY---DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
P+RL+ +KE L +V+ + + + G + ERRLHQ+M+ DRDYE
Sbjct: 194 PRRLAQVKEQLESVVVAHCEKGERNNVRLRNFAAGRTHTERRLHQLMYADRDYEGCRACH 253
Query: 164 GRVE-DKSSRPQVTVLNI----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
G D T ++I ++ Y V+ + +DRPKL FD VC L DMQYVVFH ++
Sbjct: 254 GDSSGDHKKGCDGTHVSISRCKDRGYWVVNLVCRDRPKLFFDTVCVLRDMQYVVFHAAIS 313
Query: 219 TGRTEAYQEFYIRH-VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLS 277
+ ++ A QE+YIRH +GL + +++ERE++I C+ AAIERR S GL +++CTE++ GLLS
Sbjct: 314 SKKSIADQEYYIRHKWNGLALRTQSEREKLILCIIAAIERRVSHGLRVDICTENKTGLLS 373
Query: 278 DITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 329
+TR+ REN LSI R EI G V TFYV D +G V P I++ +R++ G
Sbjct: 374 KVTRVIRENGLSIPRVEIGMRGDDVVGTFYVRDPSGQEVKPNIVELLRQECG 425
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 86/216 (39%), Gaps = 34/216 (15%)
Query: 179 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
N KD TV+ + S ++ +L ++V LTD+ ++ +++ F++ G +
Sbjct: 30 NTCKDCTVVKVDSANKYGILLEMVQVLTDLDLIISKSYISSDGGWFMDVFHVTDQAGKKL 89
Query: 239 S------------------SEAERERVIQCLEAAIERR-----ASEGLELELCTEDRVGL 275
+ + + E + C E + + ++E LE+ DR GL
Sbjct: 90 TDRNLMHQIEKELCATRAKEDIDDEELQGCAEYSQSKYSKQIVSTENTALEMSGMDRPGL 149
Query: 276 LSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT--GNPVDPKIIDSIRRQIGHTKL 333
LS+I+ + S ++ A T G+V YV + + G DP+ + ++ Q+
Sbjct: 150 LSEISAVLVNMSCNVTSATAWTHNGRVACILYVEEASKPGPIRDPRRLAQVKEQL----- 204
Query: 334 QVKRSTILAPKPPKETTTGFFLGNFFKARTFQTFKL 369
+++ K L NF RT +L
Sbjct: 205 ----ESVVVAHCEKGERNNVRLRNFAAGRTHTERRL 236
>gi|413921426|gb|AFW61358.1| ACR8 [Zea mays]
Length = 432
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 202/348 (58%), Gaps = 26/348 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G+K+ D VI YIQQ L T P+ +++ E T++E TG DR
Sbjct: 70 MDVFHVTDRLGRKLTDDSVITYIQQSLGTWNE--PARPAAL-----EGLTALELTGPDRT 122
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL C VV+A WTH R A V + D R++ I L ++
Sbjct: 123 GLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLRGEG------DADRVARILARLGHL 176
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
+RG + A ++ + + +RRLHQ+M D + V +S
Sbjct: 177 VRGDGEAPGAVAAVPAAAVAHVDRRLHQLMAADHNNSATPYPAAAVSVQSW--------A 228
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPIS 239
E+ Y+V+T++ +DRPKLLFD+VC L + YVVFHG V+T + A QEFYI DG PI
Sbjct: 229 ERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRARQEFYICSADGSPIR 288
Query: 240 SEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
SEAERER+ QCL+AAI+RR+ EG+ LELCT DR GLLS++TR FREN L + AE+ST G
Sbjct: 289 SEAERERLAQCLQAAIDRRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVAHAEVSTKG 348
Query: 300 GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK 347
G + FYVTD G I+++R ++G L V P+PP+
Sbjct: 349 GLASNVFYVTDADGKAAGQSAIEAVRARVGADCLVVGEE----PRPPR 392
>gi|343173133|gb|AEL99269.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 253 bits (645), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 164/237 (69%), Gaps = 7/237 (2%)
Query: 143 ERRLHQIMFDDRDYERVEKAVGRVEDKSSR-PQVTVLNI-EKDYTVITMRSKDRPKLLFD 200
ERRLHQIM+ DRDY+ R P VTV N EK YT + +R DRPKLLFD
Sbjct: 3 ERRLHQIMYADRDYDVTNPNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLLFD 62
Query: 201 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 260
VCTLTDMQYVV+H V EAYQE++IRH+DG PISSEAER+R+I CLEAAI+RR S
Sbjct: 63 AVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRRTS 122
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
EG+ LELC+EDR+GLLSD+TRIFREN LS+ RAE++T G + + FYV D +G PV +
Sbjct: 123 EGIRLELCSEDRIGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVIDSSGYPVKSET 182
Query: 321 IDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKART---FQTFKLIRSYS 374
I+++R +IG T L VK+ + PP+E + GF LG FK+R+ L++SYS
Sbjct: 183 IEAVRNEIGKTILHVKQDD-YSKSPPQE-SGGFSLGTLFKSRSEKFLYHLGLVKSYS 237
>gi|343173131|gb|AEL99268.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 237
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/237 (54%), Positives = 164/237 (69%), Gaps = 7/237 (2%)
Query: 143 ERRLHQIMFDDRDYERVEKAVGRVEDKSSR-PQVTVLNI-EKDYTVITMRSKDRPKLLFD 200
ERRLHQ+M+ DRDY+ R P VTV N EK YT + +R DRPKLLFD
Sbjct: 3 ERRLHQMMYADRDYDVTNLNCNDSSAYPPRTPLVTVENCSEKGYTAVNLRCADRPKLLFD 62
Query: 201 IVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 260
VCTLTDMQYVV+H V EAYQE++IRH+DG PISSEAER+R+I CLEAAI+RR S
Sbjct: 63 AVCTLTDMQYVVYHATVIAEGPEAYQEYFIRHIDGCPISSEAERQRLIHCLEAAIKRRTS 122
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
EG+ LELC+EDRVGLLSD+TRIFREN LS+ RAE++T G + + FYV D +G PV +
Sbjct: 123 EGIRLELCSEDRVGLLSDVTRIFRENGLSVTRAEVTTRGSQAVNVFYVIDSSGYPVKSET 182
Query: 321 IDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKART---FQTFKLIRSYS 374
I+++R +IG T L VK+ + PP+E + GF LG FK+R+ L++SYS
Sbjct: 183 IEAVRNEIGKTILHVKQDD-YSKSPPQE-SGGFSLGTLFKSRSEKFLYHLGLVKSYS 237
>gi|357487957|ref|XP_003614266.1| ACR4 [Medicago truncatula]
gi|355515601|gb|AES97224.1| ACR4 [Medicago truncatula]
Length = 312
Score = 250 bits (639), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 130/231 (56%), Positives = 167/231 (72%), Gaps = 6/231 (2%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D+ ++DYI++ L ++ FA ++RS VGV T +HT+IE G+DRP
Sbjct: 84 MDVFNVTDQDGNKVTDEVILDYIRKSLGPESCFATTMRS-VGVKQTPDHTAIELMGSDRP 142
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL +L CN+VNAE+WTHN RAAAV+HVTD TG AI D +RLS IKELL NV
Sbjct: 143 GLLSEVSAVLTNLKCNIVNAEVWTHNMRAAAVMHVTDEETGSAITDSQRLSLIKELLCNV 202
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNI 180
L G + R AKT ++ + +RRLHQ+MFDDRDYERV+ D+ RP V V+N
Sbjct: 203 LGGGNRKRGAKTVVTDDST-HTDRRLHQMMFDDRDYERVDDDDF---DEKQRPNVDVVNW 258
Query: 181 -EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
+KDY+V+T+ +DRPKL+FD VCTLTDMQYVVFH ++ +AYQ + I
Sbjct: 259 SDKDYSVVTIECRDRPKLVFDTVCTLTDMQYVVFHANIDAEGPQAYQVYII 309
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ +I + +L I +A IS+ GG D F VTD GN V D I+D IR+
Sbjct: 50 SANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVTDQDGNKVTDEVILDYIRKS 109
Query: 328 IG 329
+G
Sbjct: 110 LG 111
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N ++ TVI + S ++ +L ++V LTD+ ++ +++ F +
Sbjct: 31 PRVVIDNGASQNATVIRVDSANKQGILLEVVQILTDLNLIITKAYISSDGGWFMDVFNVT 90
Query: 232 HVDGLPISSEAERERVIQ------CLEAAIE----RRASEGLELELCTEDRVGLLSDITR 281
DG ++ E + + + C + ++ + +EL DR GLLS+++
Sbjct: 91 DQDGNKVTDEVILDYIRKSLGPESCFATTMRSVGVKQTPDHTAIELMGSDRPGLLSEVSA 150
Query: 282 IFRENSLSIKRAEISTIGGKVKDTFYVTD 310
+ +I AE+ T + +VTD
Sbjct: 151 VLTNLKCNIVNAEVWTHNMRAAAVMHVTD 179
>gi|226510421|ref|NP_001151985.1| ACR8 [Zea mays]
gi|195651513|gb|ACG45224.1| ACR8 [Zea mays]
Length = 433
Score = 248 bits (633), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 152/355 (42%), Positives = 204/355 (57%), Gaps = 38/355 (10%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G+K+ D VI YIQQ L + R + E T++E TG DR
Sbjct: 70 MDVFHVTDRLGRKLTDDSVITYIQQSL---GXWNEPARPAA----LEGLTALELTGPDRT 122
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVLADL C VV+A WTH R A V + G D R++ I L ++
Sbjct: 123 GLLSEVFAVLADLQCGVVDARAWTHRGRLACVAFLR----GEGXAD--RVARILARLGHL 176
Query: 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP------Q 174
+RG + A ++ + + +RRLH++M D + S+ P
Sbjct: 177 VRGDGEAPGAVAAVPAAAVAHVDRRLHELMAAD-------------HNNSATPYPAAAAA 223
Query: 175 VTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRH 232
V+V + E+ Y+V+T++ +DRPKLLFD+VC L + YVVFHG V+T + QEFYIR
Sbjct: 224 VSVQSWAERGYSVVTVQCRDRPKLLFDVVCALHCLDYVVFHGTVDTAAGDRXXQEFYIRS 283
Query: 233 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 292
DG PI SEAERER+ QCL+AAI+RR+ EG+ LELCT DR GLLS++TR FREN L +
Sbjct: 284 ADGSPIRSEAERERLAQCLQAAIDRRSLEGVRLELCTPDRPGLLSEVTRTFRENGLLVAH 343
Query: 293 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK 347
AE+ST GG + FYVTD G ID++R ++G L V P+PP+
Sbjct: 344 AEVSTKGGLASNVFYVTDADGKAAGQSAIDAVRARVGADCLVVGEE----PRPPR 394
>gi|145334915|ref|NP_001078803.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|332010737|gb|AED98120.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 425
Score = 247 bits (631), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 213/372 (57%), Gaps = 23/372 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVMPTE-----EHTSIE 53
MDVF+V D G K+ D+ +I YIQQ + + ++S++ + EHT+ E
Sbjct: 25 MDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVSTEHTAFE 84
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I DP R + +
Sbjct: 85 ITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIIDPIRKAQV 144
Query: 114 KELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV------ 159
K+ L V+ + R + P G + ERRLH++M+ + DYE
Sbjct: 145 KDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYENCFDCDCF 204
Query: 160 -EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
++ + R VT+ Y+++ ++ +DRPKLLFD VC L ++Q+VVFH +
Sbjct: 205 GDRCDALWRGRCERIHVTI-EACNGYSMVNVKCRDRPKLLFDTVCALKELQFVVFHAVAG 263
Query: 219 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSD 278
+ A QE++IR +G + +E +RER+ CL AAI RRAS+GL+LE+ TE+++GLLSD
Sbjct: 264 AKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLEIRTENKMGLLSD 323
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRS 338
+TR+ REN LSI RAE+ T G +FYVTDV G P ++++ R++G + +
Sbjct: 324 VTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELGGAVVSAVKG 383
Query: 339 TILAPKPPKETT 350
+ P+ T+
Sbjct: 384 VGMMPRRIGSTS 395
>gi|15239186|ref|NP_201390.1| ACT domain repeat 1 [Arabidopsis thaliana]
gi|13430688|gb|AAK25966.1|AF360256_1 putative uridylyl transferases [Arabidopsis thaliana]
gi|9759573|dbj|BAB11136.1| uridylyl transferases-like [Arabidopsis thaliana]
gi|14532892|gb|AAK64128.1| putative uridylyl transferases [Arabidopsis thaliana]
gi|22138094|gb|AAM93427.1| ACR1 [Arabidopsis thaliana]
gi|332010736|gb|AED98119.1| ACT domain repeat 1 [Arabidopsis thaliana]
Length = 477
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 213/372 (57%), Gaps = 23/372 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVMPTE-----EHTSIE 53
MDVF+V D G K+ D+ +I YIQQ + + ++S++ + EHT+ E
Sbjct: 77 MDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVSTEHTAFE 136
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I DP R + +
Sbjct: 137 ITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIIDPIRKAQV 196
Query: 114 KELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV------ 159
K+ L V+ + R + P G + ERRLH++M+ + DYE
Sbjct: 197 KDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYENCFDCDCF 256
Query: 160 -EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
++ + R VT+ Y+++ ++ +DRPKLLFD VC L ++Q+VVFH +
Sbjct: 257 GDRCDALWRGRCERIHVTI-EACNGYSMVNVKCRDRPKLLFDTVCALKELQFVVFHAVAG 315
Query: 219 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSD 278
+ A QE++IR +G + +E +RER+ CL AAI RRAS+GL+LE+ TE+++GLLSD
Sbjct: 316 AKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLEIRTENKMGLLSD 375
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRS 338
+TR+ REN LSI RAE+ T G +FYVTDV G P ++++ R++G + +
Sbjct: 376 VTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELGGAVVSAVKG 435
Query: 339 TILAPKPPKETT 350
+ P+ T+
Sbjct: 436 VGMMPRRIGSTS 447
>gi|297794201|ref|XP_002864985.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
gi|297310820|gb|EFH41244.1| hypothetical protein ARALYDRAFT_919932 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/365 (36%), Positives = 211/365 (57%), Gaps = 23/365 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETD--ASFAPSLRSSVGVMPTE-----EHTSIE 53
MDVF+V D G K+ D+ +I YIQQ + + ++S++ + EHT+ E
Sbjct: 77 MDVFHVTDQLGNKLTDRSLILYIQQAICSSRTGGITKEMQSNLKREVQQRHVSTEHTAFE 136
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I DP R + +
Sbjct: 137 ITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIIDPIRKAQV 196
Query: 114 KELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV------ 159
K+ L V+ + R + +P G + ERRLH++M+ + DYE
Sbjct: 197 KDHLDTVMEAHHRVGDVSHVVVRVVEAKGAPVGWAHTERRLHELMYGEGDYENCFDCDCF 256
Query: 160 -EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
++ + R VT+ Y+++ ++ +DRPKLLFD VC L ++Q+VVFH +
Sbjct: 257 GDRCDALWRGRCERIHVTI-EACNGYSMVNVKCRDRPKLLFDTVCALKELQFVVFHAVAG 315
Query: 219 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSD 278
+ A QE++IR +G + +E +RER+ CL AAI RRAS GL+LE+ TE+++GLLSD
Sbjct: 316 AKGSTAEQEYFIRKKNGCTLETEVQRERLRHCLVAAISRRASRGLKLEIRTENKMGLLSD 375
Query: 279 ITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRS 338
+TR+ REN LSI RAE+ T G +FYVTDV G + ++++ R++G + ++
Sbjct: 376 VTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETNANAVEAVVRELGGAVVSAVKA 435
Query: 339 TILAP 343
+ P
Sbjct: 436 VGMVP 440
>gi|413956339|gb|AFW88988.1| hypothetical protein ZEAMMB73_242006 [Zea mays]
Length = 486
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 180/304 (59%), Gaps = 13/304 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSI-EFTGTDR 59
MDVF+V+D G K+ D + RLE+ S ++ E G DR
Sbjct: 74 MDVFHVVDAAGGKVADAGAL---LARLESSLSADALPPRPPPAAAGAGTPTLLELVGADR 130
Query: 60 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119
PGL SEV AVL DL C V+A WTH R AA+V V D TG I D R+ ++ L +
Sbjct: 131 PGLLSEVFAVLHDLRCGTVDARAWTHAGRVAALVFVRDEETGSPIDDAARVRRVESRLRH 190
Query: 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
VLRG A+ + +N +RRLHQ++ +D + R E ++ P T +
Sbjct: 191 VLRG--GALGARMVRADASAVNMDRRLHQLLNEDGE---AGSRADRAESEAEAPTPTAVA 245
Query: 180 I----EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG 235
+ E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR +D
Sbjct: 246 VQDWVERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFHTDDDHARQEFYIRRLDE 305
Query: 236 LPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEI 295
PISS ER RVIQCLEAAIERRASEG+ LEL DR GLL+ +TR+FRENSLS+ AEI
Sbjct: 306 RPISSATERRRVIQCLEAAIERRASEGVRLELRITDRRGLLAYVTRVFRENSLSVTHAEI 365
Query: 296 STIG 299
+T G
Sbjct: 366 TTRG 369
>gi|357116994|ref|XP_003560261.1| PREDICTED: uncharacterized protein LOC100826395 [Brachypodium
distachyon]
Length = 506
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 148/394 (37%), Positives = 211/394 (53%), Gaps = 45/394 (11%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVG--VMP----TEEH 49
MDVF+V D G+K+ D + +IQQ L +P + +G V P +
Sbjct: 76 MDVFHVTDQIGRKLTDPSLPGFIQQALVPFQRRPGHGPSPKFTTCLGNVVGPGGPDVSDC 135
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP-- 107
S+EFT DRPGL S + VL D C+V + + WTH+ RAA V++VT T A P
Sbjct: 136 ASLEFTVPDRPGLLSSITQVLVDQGCHVASGQSWTHSGRAAGVLYVT--MTAAAEAQPPH 193
Query: 108 -KRLSTIKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRDYERVEK- 161
R + I+ L+ V+ + A+ S PG ++ ERRLHQ+M DDRDYE
Sbjct: 194 QSRWAHIERLVSAVVDARESVSGARRWVCMSAPAPGRVHTERRLHQLMHDDRDYESGPAP 253
Query: 162 --------AVGRVEDK---------------SSRPQVTVLNIE-KDYTVITMRSKDRPKL 197
++G V ++ +VT+ N E + Y V+ M S+DRPKL
Sbjct: 254 TPVDEEHFSMGDVRAATMMLMAARRSGARRGAADTRVTIDNWEERGYAVVKMTSRDRPKL 313
Query: 198 LFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257
LFD VC LTDMQYVVFH V + A QE+YIRH DG + S AER++V +CL AA+ER
Sbjct: 314 LFDTVCGLTDMQYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCLVAAVER 373
Query: 258 RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
RAS G+ +E+ DR GLLSD TRI RE+ LS+ R E+ + TFY+ +G V
Sbjct: 374 RASHGVRVEVRAADRSGLLSDFTRILREHGLSLLRVELKRQKDEAVGTFYLVTDSGGEVR 433
Query: 318 PKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 351
P+++ ++R ++G + ++ + PP T+
Sbjct: 434 PEVVRAVRARVGEMGISLEVAKEAPGWPPVRKTS 467
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 66/177 (37%), Gaps = 25/177 (14%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 224
V D+ P V V N +D T++ + S +R +L ++V LTD+ V+ +++
Sbjct: 16 VLDRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSDGGWL 75
Query: 225 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEG---------------------- 262
F++ G ++ + + Q L +RR G
Sbjct: 76 MDVFHVTDQIGRKLTDPSLPGFIQQAL-VPFQRRPGHGPSPKFTTCLGNVVGPGGPDVSD 134
Query: 263 -LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 318
LE DR GLLS IT++ + + + T G+ YVT P
Sbjct: 135 CASLEFTVPDRPGLLSSITQVLVDQGCHVASGQSWTHSGRAAGVLYVTMTAAAEAQP 191
>gi|326518242|dbj|BAK07373.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 492
Score = 233 bits (594), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/419 (36%), Positives = 215/419 (51%), Gaps = 49/419 (11%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMP----TEEHT 50
MDVF+V D G K+ D + +IQQ L + + +P + +G V P +
Sbjct: 76 MDVFHVTDQIGCKLTDPSLPGFIQQALLPFQRSGSGPSPKFTTCLGNVVGPGGPDVSDCA 135
Query: 51 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 110
S+EFT DRPGL S + VL D C+V + + WTH+ RAA V++VT A P R
Sbjct: 136 SLEFTVHDRPGLLSSITQVLVDQGCHVASGQAWTHSGRAAGVLYVTATGADSAALHPSRW 195
Query: 111 STIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDRDYE--------- 157
+ I+ L+ V+ ++ + +S P G ++ ERR+HQ+M DD DYE
Sbjct: 196 ARIERLVNAVVDARENMSGERRWVCMSAPVRGRVHTERRMHQLMHDDGDYESSPAPTPVD 255
Query: 158 --------RVEKAVGRVEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDM 208
R A +R VT+ N E K Y ++ M S+DRPKLLFD VC LTDM
Sbjct: 256 EEHFCMGDRAATAARSAHRTETR--VTIDNWEEKGYAIVKMTSRDRPKLLFDTVCALTDM 313
Query: 209 QYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELC 268
YVVFH V A QE+YIRH DG + S AER++V +CL AA+ERRAS G+ +E+
Sbjct: 314 HYVVFHATVGAQGPLAIQEYYIRHKDGRTVDSYAERQKVSRCLVAAVERRASHGVRVEVR 373
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 328
DR GLLSD TR RE+ LS+ R EI + TF++ TG V P+ + ++R ++
Sbjct: 374 AADRSGLLSDFTRALREHGLSLLRVEIKRQKEEAIGTFFLVTDTGGEVRPEALRAVRTRV 433
Query: 329 GHTKLQ------------VKRSTILAPKPPKETTTGFFLGNFFKA---RTFQTFKLIRS 372
+ V+++ LAP P + + LG+ + + F IRS
Sbjct: 434 AEMGISLDVAKEAFGWPPVRKTRALAPSPADQERPRYSLGSLLWSHLGKLSNNFGYIRS 492
>gi|2827701|emb|CAA16674.1| predicted protein [Arabidopsis thaliana]
Length = 446
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 122/318 (38%), Positives = 187/318 (58%), Gaps = 16/318 (5%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
EHT+ E TG +RPGL SE+ AVL+D+ C+V A WTH++RAA V+++ D G I DP
Sbjct: 100 EHTAFEITGINRPGLLSEISAVLSDIGCHVTAAVAWTHHERAAMVIYLEDGFNGGPIIDP 159
Query: 108 KRLSTIKELLFNVLRGYD--------DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 159
R + +K+ L V+ + R + P G + ERRLH++M+ + DYE
Sbjct: 160 IRKAQVKDHLDTVMEAHHIVGDVSHVVVRVVEAKGVPVGWAHTERRLHELMYGEGDYENC 219
Query: 160 -------EKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 212
++ + R VT+ Y+++ ++ +DRPKLLFD VC L ++Q+VV
Sbjct: 220 FDCDCFGDRCDALWRGRCERIHVTIEAC-NGYSMVNVKCRDRPKLLFDTVCALKELQFVV 278
Query: 213 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDR 272
FH + + A QE++IR +G + +E +RER+ CL AAI RRAS+GL+LE+ TE++
Sbjct: 279 FHAVAGAKGSTAEQEYFIRKKNGGTLETEGQRERLRHCLVAAISRRASQGLKLEIRTENK 338
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTK 332
+GLLSD+TR+ REN LSI RAE+ T G +FYVTDV G P ++++ R++G
Sbjct: 339 MGLLSDVTRVVRENGLSITRAEMCTQGEIAVGSFYVTDVNGGETGPSEVEAVVRELGGAV 398
Query: 333 LQVKRSTILAPKPPKETT 350
+ + + P+ T+
Sbjct: 399 VSAVKGVGMMPRRIGSTS 416
>gi|356514354|ref|XP_003525871.1| PREDICTED: uncharacterized protein LOC100783892 [Glycine max]
Length = 481
Score = 225 bits (574), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/368 (37%), Positives = 208/368 (56%), Gaps = 18/368 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE-----HTSIEFT 55
MDVF+V D DG K+ D+ ++ YIQQ L S + + S + + E + +IE T
Sbjct: 76 MDVFHVTDHDGNKLTDRGLVHYIQQTLCEARSNSKEISSDIELTSCNEPPRLVNLAIELT 135
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
++ GLFSE+ AVL L NV +A WTHNDR A ++H+ D I + +RL+ ++
Sbjct: 136 TANQHGLFSEMSAVLLGLGFNVTSATAWTHNDRVACIIHLEDAKKLGPI-NAERLAQVQP 194
Query: 116 LLFNVLRGYD---DFRKAKTSLSP--PGIMNRERRLHQIMFDDRDYER-----VEKAVGR 165
L NV++ D + + + L G + ERRLHQ+M+ D DYER V G
Sbjct: 195 ELRNVVKARDRNGEEERVRLRLRSFGAGRNHTERRLHQMMYADGDYERCRACHVGDRNGE 254
Query: 166 VEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 224
+ QVTV E K Y V+ +RS+DRPKLLFD VC LTDMQY VFH V++ + A
Sbjct: 255 KKKGCEETQVTVGRYEEKGYWVVNVRSRDRPKLLFDTVCVLTDMQYEVFHAAVSSNGSMA 314
Query: 225 YQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFR 284
QE+++R + +E+E++++ CL AAIERR S GL++++ E+ GLLS +TR+ R
Sbjct: 315 DQEYFVRPKGSSNLDNESEKQKLSLCLIAAIERRVSHGLKVDIRAENTTGLLSKVTRVIR 374
Query: 285 ENSLSIKRAEISTIGGKVK-DTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAP 343
EN LSI + +I ++ +F V + +G V+P I + +RR+ G + + S P
Sbjct: 375 ENGLSITKVQIGVESDEMAVGSFCVANSSGQEVNPNIAELVRRETGGSVVANYNSPYRVP 434
Query: 344 KPPKETTT 351
K + T
Sbjct: 435 KSLSSSKT 442
>gi|297738125|emb|CBI27326.3| unnamed protein product [Vitis vinifera]
Length = 400
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 130/171 (76%)
Query: 190 RSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQ 249
+S++ LLFD VCTLTDMQYVVFH V+ EAYQE+YIRH+DG P+ S+AER+RVIQ
Sbjct: 199 KSREAKTLLFDTVCTLTDMQYVVFHANVDAEGPEAYQEYYIRHIDGSPVKSDAERQRVIQ 258
Query: 250 CLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
CLEAAIERR SEGL+LELCT DRVGLLSD+TRIFRENSLS+ RAE++T GK +TF+V
Sbjct: 259 CLEAAIERRVSEGLKLELCTTDRVGLLSDVTRIFRENSLSVTRAEVTTRAGKAVNTFHVR 318
Query: 310 DVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFK 360
D +G PVD K IDSIR IG T LQVK S + P+E+ T F L F+
Sbjct: 319 DASGYPVDAKTIDSIREAIGQTILQVKGSPEEIKQIPQESPTRFLLVGLFR 369
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 106/134 (79%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG KI D+E++DYIQ+ L +DA F S+R SVGV+P+ +HTSIE TG+DRP
Sbjct: 74 MDVFNVTDQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELTGSDRP 133
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL L C+VVNAE+WTHN RAAAV+HVTD TG AI DP+RLS +K+LL NV
Sbjct: 134 GLLSEVSAVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQLLCNV 193
Query: 121 LRGYDDFRKAKTSL 134
L+G + R+AKT L
Sbjct: 194 LKGSNKSREAKTLL 207
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQ 327
+ ++ G+L ++ ++ + +L I +A IS+ GG D F VTD GN + D +I+D I++
Sbjct: 40 SANKHGILLEVVQVLIDLNLIITKAYISSDGGWFMDVFNVTDQDGNKITDEEILDYIQKS 99
Query: 328 IG 329
+G
Sbjct: 100 LG 101
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V + N K+ +VI + S ++ +L ++V L D+ ++ +++ F +
Sbjct: 21 PRVVIDNETCKNASVIRVDSANKHGILLEVVQVLIDLNLIITKAYISSDGGWFMDVFNVT 80
Query: 232 HVDGLPISSEAERERVIQ------CLEAAIERR-----ASEGLELELCTEDRVGLLSDIT 280
DG I+ E + + + C +++ R +++ +EL DR GLLS+++
Sbjct: 81 DQDGNKITDEEILDYIQKSLGSDACFISSMRRSVGVIPSTDHTSIELTGSDRPGLLSEVS 140
Query: 281 RIFRENSLSIKRAEISTIGGKVKDTFYVTD-VTGNPV-DPKIIDSIRR 326
+ S+ AE+ T + +VTD TG + DP+ + +++
Sbjct: 141 AVLTHLKCSVVNAEVWTHNTRAAAVMHVTDEETGCAITDPERLSKVKQ 188
>gi|226508650|ref|NP_001145757.1| uncharacterized protein LOC100279264 [Zea mays]
gi|219884321|gb|ACL52535.1| unknown [Zea mays]
gi|413933158|gb|AFW67709.1| hypothetical protein ZEAMMB73_506779 [Zea mays]
Length = 494
Score = 220 bits (561), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 144/385 (37%), Positives = 208/385 (54%), Gaps = 41/385 (10%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMPTEEHTS--- 51
MDVF+V D G+K+ D + ++IQ+ L T +P + +G V P S
Sbjct: 76 MDVFHVTDRTGRKLTDPSLPEFIQRALVRFHRTVNCASPRFTTCLGNVVGPAGPDVSGCA 135
Query: 52 -IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 110
+EFT DRPGL S + +VLAD C+V + + WTHN RAA V++VT P R
Sbjct: 136 ALEFTVNDRPGLLSSITSVLADSGCHVASGQAWTHNGRAAGVLYVTP-------PLPSRW 188
Query: 111 STIKELLFNVLRGYDDFRKAK--TSLSPP--GIMNRERRLHQIMFDDRDYER------VE 160
+ ++ L+ V+ ++ + T +S P G ++ ERRLHQ+M DDRDYE V+
Sbjct: 189 ARVERLVEAVVGARENVAGERHWTRVSGPARGRVHTERRLHQLMRDDRDYESGPAPTPVD 248
Query: 161 KAVGRVEDKSSRPQVTVLNI------------EKDYTVITMRSKDRPKLLFDIVCTLTDM 208
+ + V DK++ T E+ Y V+ M S+DRP LLFD VC LTDM
Sbjct: 249 EGLFGVGDKAATTARTARRARAATRVSVDSWEERGYVVVKMTSRDRPSLLFDTVCALTDM 308
Query: 209 QYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELC 268
QYVVFH V + A QE+YIRH DG + S AER++V +CL AA+ERRA+ G+ +E+
Sbjct: 309 QYVVFHATVGSQGVLAIQEYYIRHKDGGTVDSSAERQKVSRCLVAAVERRATHGVRVEVH 368
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 328
DR GLLSD TR+ RE+ LS+ R E+ + FY+ TG V + + +++ ++
Sbjct: 369 AADRSGLLSDFTRVLREHGLSLLRVELKRHRDEAFGVFYLDTDTGGEVRTEALRAVQMRV 428
Query: 329 GHT--KLQVKRSTILAPKPPKETTT 351
L V + T PP T+
Sbjct: 429 AEMGISLDVVKETKAPGWPPVRKTS 453
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 63/164 (38%), Gaps = 22/164 (13%)
Query: 168 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV--------------- 211
D+ P V V N +D T++ + S +R +L D+V LTD+ V
Sbjct: 18 DRLGTPGVVVDNETREDCTLVKVDSVNRDGVLLDMVQLLTDLDLVISKSYICSDGGWLMD 77
Query: 212 VFHGMVNTGRT---EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA---SEGLEL 265
VFH TGR + EF R + + R CL + S L
Sbjct: 78 VFHVTDRTGRKLTDPSLPEFIQRALVRFHRTVNCASPRFTTCLGNVVGPAGPDVSGCAAL 137
Query: 266 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
E DR GLLS IT + ++ + + T G+ YVT
Sbjct: 138 EFTVNDRPGLLSSITSVLADSGCHVASGQAWTHNGRAAGVLYVT 181
>gi|222624567|gb|EEE58699.1| hypothetical protein OsJ_10135 [Oryza sativa Japonica Group]
Length = 369
Score = 220 bits (560), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 140/326 (42%), Positives = 181/326 (55%), Gaps = 42/326 (12%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G+K+ D D + RLE+ S R++ G E T +E G DRP
Sbjct: 74 MDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVGADRP 130
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
F WTH R AA+V V D TG I D R+ I+ L +V
Sbjct: 131 ASFRRA----------------WTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLRHV 174
Query: 121 LRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL- 178
LRG R A+T L+ P N +RRLHQ++ +D G + + + P V
Sbjct: 175 LRG--GARCARTVLADPSAAGNLDRRLHQLLKED----------GEADSRGAAPMTAVAV 222
Query: 179 --NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR DG
Sbjct: 223 QDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGR 282
Query: 237 PISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
PISSEAER+ VI+CL+AAIERRASEG+ LEL DR GLL+ +TR+FREN LS+ AEI+
Sbjct: 283 PISSEAERQHVIRCLQAAIERRASEGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEIT 342
Query: 297 TIGGKVKDTFYVTDVTGN--PVDPKI 320
T +D +T T P P I
Sbjct: 343 T-----RDDMAMTSSTSPTWPAAPPI 363
>gi|28273389|gb|AAO38475.1| putative ACT domain containing protein [Oryza sativa Japonica
Group]
Length = 512
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 144/386 (37%), Positives = 207/386 (53%), Gaps = 35/386 (9%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV--------GVMPTEEH 49
MDVF+V D G+K+ D + ++IQ+ L + PS R + G +
Sbjct: 76 MDVFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTCLGNVVGPGGPDVSDC 135
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT----DHSTGYAIK 105
++EFT DRPGL S + VLAD C+V + + WTH+ RAA V++VT + A
Sbjct: 136 AALEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVTTAGGGAAAEAAAP 195
Query: 106 DPKRLSTIKELLFNVLRGYDDF--RKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEK 161
P R I+ L+ V+ + + S+S P G ++ ERRLHQ+M DDRDYE
Sbjct: 196 APSRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERRLHQLMHDDRDYESGPA 255
Query: 162 AVG------RVEDKSS------RPQVTVLNIE----KDYTVITMRSKDRPKLLFDIVCTL 205
A + DK++ R T ++IE + Y V+ M S+DRPKLLFD VC L
Sbjct: 256 ATPVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKMTSRDRPKLLFDTVCAL 315
Query: 206 TDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL 265
TDM YVVFH V + A QE+YIRH DG + S AER++V +CL AA+ERRAS G ++
Sbjct: 316 TDMHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCLVAAVERRASHGAKV 375
Query: 266 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIR 325
E+ DR GLLSD TR+ RE+ LS+ R E+ + TFY+ G V + + ++R
Sbjct: 376 EVRAADRSGLLSDFTRMLREHGLSLLRVELKRRKDEAIGTFYLVTDAGGEVRAEALHAVR 435
Query: 326 RQIGHTKLQVKRSTILAPKPPKETTT 351
++G + + + PP T+
Sbjct: 436 ARVGKVGISFEVAKDAPGWPPVRKTS 461
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 63/162 (38%), Gaps = 27/162 (16%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV---------------VFHGM 216
P V V N +D T++ + S +R +L ++V LTD+ V VFH
Sbjct: 23 PGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSDGGWLMDVFHVT 82
Query: 217 VNTGRT---EAYQEFYIRHVDGLPI---SSEAERERVIQCLEAAIERRA---SEGLELEL 267
GR + EF R + +P R CL + S+ LE
Sbjct: 83 DQMGRKLTDPSLPEFIQRAL--VPCQRPGGNGPSPRFTTCLGNVVGPGGPDVSDCAALEF 140
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
DR GLLS IT++ +N + + T G+ YVT
Sbjct: 141 TVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVT 182
>gi|388519119|gb|AFK47621.1| unknown [Lotus japonicus]
Length = 262
Score = 219 bits (558), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/232 (49%), Positives = 157/232 (67%), Gaps = 10/232 (4%)
Query: 138 GIMNRERRLHQIMFDDRDYERVEKAVGRVE---DKSSRPQVTVLNI-EKDYTVITMRSKD 193
G + +RRLHQ++F DRDYER + S RP++ + EK Y+ ++++ KD
Sbjct: 28 GSTHMDRRLHQMLFADRDYERASVTTTTPDVDCPLSFRPKIEIERCGEKGYSAVSVKCKD 87
Query: 194 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 253
R KL+FDIVCTLTDMQYVVFH +++ A QE++IRH+DG + +E E+ERV +C+EA
Sbjct: 88 RAKLMFDIVCTLTDMQYVVFHATISSEGPYASQEYFIRHMDGCTLDTEGEKERVTKCIEA 147
Query: 254 AIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
AI+RR SEG+ LELC +DRVGLLS++TRI RE+ L++ RA +ST+G K + FYV D G
Sbjct: 148 AIQRRVSEGVSLELCAKDRVGLLSEVTRILREHGLTVCRAGVSTVGEKGLNVFYVRDAYG 207
Query: 314 NPVDPKIIDSIRRQIGHTKL-QVKRSTILAPKPPKET----TTGFFLGNFFK 360
NPVD KII+++R++IG T + VKR A K P ET FF GN +
Sbjct: 208 NPVDMKIIEALRKEIGQTVMVNVKRVPTNA-KAPAETRGWAKISFFFGNLLE 258
>gi|242038257|ref|XP_002466523.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
gi|241920377|gb|EER93521.1| hypothetical protein SORBIDRAFT_01g009300 [Sorghum bicolor]
Length = 500
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 138/389 (35%), Positives = 209/389 (53%), Gaps = 38/389 (9%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL-----ETDASFAPSLRSSVG--VMP----TEEH 49
MDVF+V D G+K+ D + ++IQ+ L + P + +G V P +
Sbjct: 76 MDVFHVTDQIGRKLTDPSLPEFIQRALVPFHRPGNGPSPPRFTTCLGNVVGPGGPDVSDC 135
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD--- 106
++EFT DR GL S + +VL D C+V + + WTHN RAA V++VT +
Sbjct: 136 AALEFTVHDRAGLLSSITSVLVDNGCHVASGQAWTHNGRAAGVLYVTTTAAATTADGAGA 195
Query: 107 ----PKRLSTIKELLFNVLRGYDDF--RKAKTSLSPP--GIMNRERRLHQIMFDDRDYER 158
P R + I+ L+ V+ ++ + +S P G ++ ERRLHQ+M DDRDYE
Sbjct: 196 AALLPSRWARIERLVNAVVDARENVTGERHWVCVSEPVQGRVHTERRLHQLMHDDRDYES 255
Query: 159 ------VEKAVGRVEDKSS------RPQVTVLNI----EKDYTVITMRSKDRPKLLFDIV 202
V++ + + +K++ R VT ++I E+ Y V+ M S+DRP+LLFD V
Sbjct: 256 GPAPTPVDEELFSMGEKAATARTARRGAVTRVSIDSWEERGYAVVKMTSRDRPRLLFDTV 315
Query: 203 CTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEG 262
C LTDMQYVVFH V + A QE+YIRH DG + S AER++V +CL AA+ERRA+ G
Sbjct: 316 CALTDMQYVVFHATVGSQGALAIQEYYIRHKDGRTVDSSAERQKVSRCLVAAVERRATHG 375
Query: 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
+ +E+ DR GLLSD TR+ RE+ LS+ R E+ FY+ TG V + +
Sbjct: 376 VRVEVRAADRSGLLSDFTRVLREHGLSLLRVELKRHKDDAFGIFYLVTDTGGEVRAEALR 435
Query: 323 SIRRQIGHTKLQVKRSTILAPKPPKETTT 351
+++ ++ + + PP T+
Sbjct: 436 AVQARVAEMDISLDVVKEAPGWPPVRKTS 464
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 64/164 (39%), Gaps = 23/164 (14%)
Query: 168 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
D+ P V V N +D T++ + S +R +L ++V LTD+ V++ +++
Sbjct: 18 DRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVIYKSYISSDGGWLMD 77
Query: 227 EFYIRHVDGLPISSEAERE-------------------RVIQCLEAAIERRA---SEGLE 264
F++ G ++ + E R CL + S+
Sbjct: 78 VFHVTDQIGRKLTDPSLPEFIQRALVPFHRPGNGPSPPRFTTCLGNVVGPGGPDVSDCAA 137
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYV 308
LE DR GLLS IT + +N + + T G+ YV
Sbjct: 138 LEFTVHDRAGLLSSITSVLVDNGCHVASGQAWTHNGRAAGVLYV 181
>gi|108707165|gb|ABF94960.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 538
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 159/265 (60%), Gaps = 19/265 (7%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G+K+ D D + RLE+ S R++ G E T +E G DRP
Sbjct: 74 MDVFHVTDAAGRKVADA---DALLARLESSLSAEALPRAAAGGPAAEGLTLLELVGADRP 130
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL SEV AVL DL CN V A WTH R AA+V V D TG I D R+ I+ L +V
Sbjct: 131 GLLSEVFAVLHDLRCNTVEARAWTHGGRVAALVFVRDEETGAPIDDAARVRRIESRLRHV 190
Query: 121 LRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL- 178
LRG R A+T L+ P N +RRLHQ++ +D G + + + P V
Sbjct: 191 LRG--GARCARTVLADPSAAGNLDRRLHQLLKED----------GEADSRGAAPMTAVAV 238
Query: 179 --NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
E+ Y+V+T+ +DRPKLLFD+VCTLTD+ YVV+HG +T A QEFYIR DG
Sbjct: 239 QDWGERGYSVVTVSCRDRPKLLFDVVCTLTDLDYVVYHGTFDTDGDHAQQEFYIRRSDGR 298
Query: 237 PISSEAERERVIQCLEAAIERRASE 261
PISSEAER+ VI+CL+AAIERRASE
Sbjct: 299 PISSEAERQHVIRCLQAAIERRASE 323
>gi|125590195|gb|EAZ30545.1| hypothetical protein OsJ_14593 [Oryza sativa Japonica Group]
Length = 397
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/195 (53%), Positives = 132/195 (67%), Gaps = 12/195 (6%)
Query: 192 KDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVDGLPISSEAERERVIQC 250
+ + LLFD VCT+TDM YV+ HG V++ R AYQE+YIRHVDG P+ SEAER+RV+QC
Sbjct: 203 RGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHVDGDPVRSEAERQRVVQC 262
Query: 251 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEAAIERR ++GL LE+ T DR GLLSD+TRIFREN L+I+RAEIS+ G+ DTFY++D
Sbjct: 263 LEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRAEISSERGEAVDTFYLSD 322
Query: 311 VTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET----------TTGFFLGNFFK 360
G+PV+ K ID+IR QIG L+VK + +T F GN FK
Sbjct: 323 PQGHPVEAKTIDAIRAQIGEATLRVKHNPFADGDGAGGGGGGATDDVAGSTAFLFGNLFK 382
Query: 361 -ARTFQTFKLIRSYS 374
R FQ F LI+ YS
Sbjct: 383 FYRPFQNFSLIKLYS 397
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/260 (38%), Positives = 133/260 (51%), Gaps = 28/260 (10%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVFNV D DG K+ D + I YIQ LE D + P +R++VG++P EE+T IE TGTDRP
Sbjct: 81 MDVFNVTDRDGNKVLDDQTISYIQTTLEADDWYYPEVRNTVGIVPAEEYTVIELTGTDRP 140
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT-DHSTGYAIKDPKRLSTIKELLFN 119
GL SEVCAVLA + C V +AE+WTHN R AAVVHVT D +G AI+D R++ I L N
Sbjct: 141 GLLSEVCAVLAGMRCAVRSAELWTHNTRVAAVVHVTDDGGSGGAIEDEARIADISTRLGN 200
Query: 120 VLRGYDDF---------------RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 164
+LRG S P G +E + + D D R E
Sbjct: 201 LLRGQSGLLFDTVCTITDMGYVIHHGAVSSEPRGGAYQEYYIRHV---DGDPVRSEAERQ 257
Query: 165 RVEDKSSRPQVTVLNIEK---DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 221
RV Q IE+ D + +R+ DR LL D+ + + +++ R
Sbjct: 258 RV------VQCLEAAIERRTADGLALEVRTGDRAGLLSDVTRIFRENGLTIRRAEISSER 311
Query: 222 TEAYQEFYIRHVDGLPISSE 241
EA FY+ G P+ ++
Sbjct: 312 GEAVDTFYLSDPQGHPVEAK 331
>gi|125545602|gb|EAY91741.1| hypothetical protein OsI_13381 [Oryza sativa Indica Group]
Length = 551
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 206/414 (49%), Gaps = 65/414 (15%)
Query: 3 VFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV--------GVMPTEEHTS 51
+F+V D G+K+ D + ++IQ+ L + PS R + G + +
Sbjct: 87 LFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTCLGNVVGPGGPDVSDCAA 146
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT----DHSTGYAIKDP 107
+EFT DRPGL S + VLAD C+V + + WTH+ RAA V++VT + A P
Sbjct: 147 LEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVTTAGGGAAAEAAAPAP 206
Query: 108 KRLSTIKELLFNVLRGYDDF--RKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAV 163
R I+ L+ V+ + + S+S P G ++ ERRLHQ+M DDRDYE A
Sbjct: 207 SRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERRLHQLMHDDRDYESGPAAT 266
Query: 164 G------RVEDKSS------RPQVTVLNIE----KDYTVITMRSKDRPKLLFDIVCTLTD 207
+ DK++ R T ++IE + Y V+ M S+DRPKLLFD VC LTD
Sbjct: 267 PVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKMTSRDRPKLLFDTVCALTD 326
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS------- 260
M YVVFH V + A QE+YIRH DG + S AER++V +CL AA+ERRAS
Sbjct: 327 MHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCLVAAVERRASHVRLIIA 386
Query: 261 -----------------------EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297
+G ++E+ DR GLLSD TR+ RE+ LS+ R E+
Sbjct: 387 ILHFSPVGYSYARRHGRSLTMFPQGAKVEVRAADRSGLLSDFTRMLREHGLSLLRVELKR 446
Query: 298 IGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 351
+ TFY+ G V + + ++R ++G + + + PP T+
Sbjct: 447 RKDEAVGTFYLVTDAGGEVRAEALHAVRARVGKVGISFEVAKDAPGWPPVRKTS 500
>gi|115455115|ref|NP_001051158.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|108710889|gb|ABF98684.1| ACT domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549629|dbj|BAF13072.1| Os03g0729800 [Oryza sativa Japonica Group]
gi|125587799|gb|EAZ28463.1| hypothetical protein OsJ_12444 [Oryza sativa Japonica Group]
Length = 551
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 206/414 (49%), Gaps = 65/414 (15%)
Query: 3 VFNVIDCDGKKIRDKEVIDYIQQRL---ETDASFAPSLRSSV--------GVMPTEEHTS 51
+F+V D G+K+ D + ++IQ+ L + PS R + G + +
Sbjct: 87 LFHVTDQMGRKLTDPSLPEFIQRALVPCQRPGGNGPSPRFTTCLGNVVGPGGPDVSDCAA 146
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT----DHSTGYAIKDP 107
+EFT DRPGL S + VLAD C+V + + WTH+ RAA V++VT + A P
Sbjct: 147 LEFTVHDRPGLLSSITQVLADNGCHVASGQAWTHSGRAAGVLYVTTAGGGAAAEAAAPAP 206
Query: 108 KRLSTIKELLFNVLRGYDDF--RKAKTSLSPP--GIMNRERRLHQIMFDDRDYERVEKAV 163
R I+ L+ V+ + + S+S P G ++ ERRLHQ+M DDRDYE A
Sbjct: 207 SRWEHIEGLVDAVMGAREKLTGERHWVSMSAPVEGRVHTERRLHQLMHDDRDYESGPAAT 266
Query: 164 G------RVEDKSS------RPQVTVLNIE----KDYTVITMRSKDRPKLLFDIVCTLTD 207
+ DK++ R T ++IE + Y V+ M S+DRPKLLFD VC LTD
Sbjct: 267 PVDEEHFSMGDKAATTARLARRVETRVSIESWEERGYAVVKMTSRDRPKLLFDTVCALTD 326
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS------- 260
M YVVFH V + A QE+YIRH DG + S AER++V +CL AA+ERRAS
Sbjct: 327 MHYVVFHATVGSQGPLAIQEYYIRHKDGRTVDSNAERQKVSRCLVAAVERRASHVRLIIA 386
Query: 261 -----------------------EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297
+G ++E+ DR GLLSD TR+ RE+ LS+ R E+
Sbjct: 387 ILHFSPVGYSYARRHGRSLTMFPQGAKVEVRAADRSGLLSDFTRMLREHGLSLLRVELKR 446
Query: 298 IGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTT 351
+ TFY+ G V + + ++R ++G + + + PP T+
Sbjct: 447 RKDEAIGTFYLVTDAGGEVRAEALHAVRARVGKVGISFEVAKDAPGWPPVRKTS 500
>gi|356565477|ref|XP_003550966.1| PREDICTED: uncharacterized protein LOC100797191 [Glycine max]
Length = 440
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 127/364 (34%), Positives = 186/364 (51%), Gaps = 51/364 (14%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE-----HTSIEFT 55
MDVF+V D DG K+ D ++ YIQQ L S + S + + E + +IE T
Sbjct: 76 MDVFHVTDQDGNKLTDVGLVHYIQQALCESRSSNKEISSDIELTSCNEPPRVVNLAIELT 135
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
TD+ G+FSE+ AVL L NV +A WTHNDR A ++H+ D + I + +RL+ ++
Sbjct: 136 TTDKHGMFSEISAVLLGLGFNVTSATAWTHNDRVACIIHLEDANKLGPI-NAERLAQVQA 194
Query: 116 LLFNVLR------GYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L NV++ G DD + + G + ERRLHQ+M+ D DYER+ G E
Sbjct: 195 QLQNVVKARDGKNGEDDRVRLRLRSFGGGRNHTERRLHQMMYADGDYERLRACHG--EKG 252
Query: 170 SSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
V+V E K Y V+ +RS+DRPKL FD VC LTDMQY VFH V++ + A Q
Sbjct: 253 CEGTNVSVGRYEVKGYWVVNVRSRDRPKLFFDTVCVLTDMQYEVFHAAVSSNGSMADQ-- 310
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSL 288
GL++++ E+ GLLS +TR+ REN L
Sbjct: 311 ---------------------------------GLKVDIRAENTTGLLSKVTRVIRENGL 337
Query: 289 SIKRAEISTIGGKVK-DTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK 347
SI + +I G ++ +F+V + +G ++P I + +RRQIG + + S PK
Sbjct: 338 SITKVQIGVEGDEMAVGSFHVANSSGQELNPNIAELVRRQIGGSVVANNNSPYRVPKSLS 397
Query: 348 ETTT 351
+ T
Sbjct: 398 TSKT 401
>gi|414872600|tpg|DAA51157.1| TPA: hypothetical protein ZEAMMB73_416104 [Zea mays]
Length = 390
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 165/290 (56%), Gaps = 30/290 (10%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL----ETDASFAPSLRSSVG--VMPTEEHTS--- 51
MDVF+V D G+K+ D + ++IQ+ L +P + +G V P S
Sbjct: 76 MDVFHVTDQIGRKLTDPSLPEFIQRALVPTHRPGNGPSPRFTTCLGNVVGPGGPDVSGCA 135
Query: 52 -IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 110
+EFT DRPGL S + +VLAD C+V + + WTHN RAA V++VTD + G A+ P R
Sbjct: 136 ALEFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYVTDTAGGAALL-PGRC 194
Query: 111 STIKELLFNVLRGYDDF----RKAKTSLSPPGIMNRERRLHQIMFDDRDYER------VE 160
+ I+ L+ V+ ++ + S G ++ ERRLHQ+M DDRDYE V+
Sbjct: 195 ARIERLVNAVVDARENVTGERHWVRVSEPAQGRVHTERRLHQLMHDDRDYESGPAPTPVD 254
Query: 161 KAVGRVEDKSSRPQVTVLNI---------EKDYTVITMRSKDRPKLLFDIVCTLTDMQYV 211
+ + V +K++ + + E+ Y V+ M S+DRP+LLFD VC LTDMQYV
Sbjct: 255 EDLFSVGEKAATARTARRAVTRVSIDSWEERGYAVVKMTSRDRPRLLFDTVCALTDMQYV 314
Query: 212 VFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
VFH V + A QE+YIRH DG + + AER++V +CL AA+ERRA+
Sbjct: 315 VFHATVGSQGPLAIQEYYIRHKDGRTVDNSAERQKVSRCLVAAVERRATH 364
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 63/169 (37%), Gaps = 22/169 (13%)
Query: 168 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYV--------------- 211
D+ P V V N +D T++ + S +R +L ++V LTD+ V
Sbjct: 18 DRFGTPGVVVDNETREDCTLVKVDSVNRDGVLLEMVQLLTDLDLVISKSYISSDGGWLMD 77
Query: 212 VFHGMVNTGRT---EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA---SEGLEL 265
VFH GR + EF R + R CL + S L
Sbjct: 78 VFHVTDQIGRKLTDPSLPEFIQRALVPTHRPGNGPSPRFTTCLGNVVGPGGPDVSGCAAL 137
Query: 266 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
E DR GLLS IT + +N + + T G+ YVTD G
Sbjct: 138 EFTVHDRPGLLSSITSVLADNGCHVASGQAWTHNGRAAGVLYVTDTAGG 186
>gi|148279892|gb|ABQ53997.1| unknown protein [Cicer arietinum]
Length = 106
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/106 (81%), Positives = 93/106 (87%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 328
TEDRVGLLSDITRIFRENSL IKRAEIST GK KDTFYVTDVTG+PVDPKIIDSIRRQI
Sbjct: 1 TEDRVGLLSDITRIFRENSLCIKRAEISTENGKAKDTFYVTDVTGSPVDPKIIDSIRRQI 60
Query: 329 GHTKLQVKRSTILAPKPPKETTTGFFLGNFFKARTFQTFKLIRSYS 374
G T LQVK ++ L+PKPP+ T GF LG+FFKAR+FQ FKLIRSYS
Sbjct: 61 GDTVLQVKHNSSLSPKPPQGTKIGFLLGSFFKARSFQNFKLIRSYS 106
>gi|1532164|gb|AAB07874.1| similar to uridylyl transferase, Swiss-Prot Accession Number
P43919; localized according to blastn similarity to EST
sequences; therefore, the coding span corresponds only
to an area of similarity since the initation codon and
stop codon could not be precisely determined, partial
[Arabidopsis thaliana]
Length = 211
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 101/149 (67%), Gaps = 30/149 (20%)
Query: 3 VFNVIDCDGKKIRDKEVIDYIQ-----------------------------QRLETDAS- 32
VF VID DG KIRD +V+DYIQ QR+E++A
Sbjct: 1 VFKVIDQDGNKIRDTQVLDYIQKVSNVFHHFFSFIFNRFFSLCKTFVEFIAQRIESNAGW 60
Query: 33 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 92
F P LRSSVGVMPT+E+TSIE GTDRPGL SEV AVL DLHCNVVNAEIWTHN RAAAV
Sbjct: 61 FIPPLRSSVGVMPTDEYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAV 120
Query: 93 VHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+HVTD+ST AI DP RLSTIKELL NVL
Sbjct: 121 IHVTDNSTHSAITDPIRLSTIKELLCNVL 149
Score = 114 bits (285), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/145 (46%), Positives = 86/145 (59%), Gaps = 9/145 (6%)
Query: 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEA 242
+YT I + DRP LL ++ LTD+ V + + T T A ++ ++
Sbjct: 76 EYTSIELAGTDRPGLLSEVSAVLTDLHCNVVNAEIWTHNTRAAAVIHVTDNSTHSAITDP 135
Query: 243 ERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKV 302
R I+ L + LEL EDRVGLLSDITR FRENSL+I RAEIST GK
Sbjct: 136 IRLSTIKELLCNV---------LELSAEDRVGLLSDITRTFRENSLTIVRAEISTREGKA 186
Query: 303 KDTFYVTDVTGNPVDPKIIDSIRRQ 327
KDTFYVTDVTGNPV+ KI++SIR+Q
Sbjct: 187 KDTFYVTDVTGNPVESKIVESIRQQ 211
>gi|384244797|gb|EIE18295.1| hypothetical protein COCSUDRAFT_10349, partial [Coccomyxa
subellipsoidea C-169]
Length = 385
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/322 (30%), Positives = 174/322 (54%), Gaps = 21/322 (6%)
Query: 2 DVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTE------EHTSIEFT 55
DVF V + +G+K+R+ +D++++ L + + S+ G M E E T +E
Sbjct: 66 DVFEVTEVNGEKVRNTRKLDFLKRMLNIEEE---GIFSNAGAMGHEGASGPTESTVVELA 122
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
G D+ G ++V +L + CNV +A +WT+ R A V+ V + G I D +L +++
Sbjct: 123 GPDKAGKLAQVTRLLTNNGCNVRSAAVWTYYGRVAFVLSVLE--KGKPIADQVKLQGLRQ 180
Query: 116 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF--DDRDYERVEKAVGRVEDKSSRP 173
++ +++ G + + + G+++ +R LHQ+M D R +++ +P
Sbjct: 181 IMLDIM-GPEGEGISGVHVQHSGVVHHDRTLHQMMLAEDSRAWDQSHS----THAARLKP 235
Query: 174 QVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG-RTEAYQEFYIR 231
++++ Y +I++ KDR KLLFD VCTL DM+Y V+HG +N+ A QE+Y +
Sbjct: 236 NISIVQCRHTGYWLISIACKDRNKLLFDTVCTLADMEYDVYHGTINSHPDGSATQEYYAK 295
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
G P + A E++ LEA+I+RR +GL+L + + D G L+ +T + R+ L+I
Sbjct: 296 PRWGRPWDARAA-EKLAAMLEASIQRRFPKGLKLHVHSVDSFGSLATLTGVLRDAGLTIN 354
Query: 292 RAEISTIGGKVKDTFYVTDVTG 313
RA+ ++ TFYV D +G
Sbjct: 355 RAKTNSANNVCGHTFYVMDASG 376
>gi|357476531|ref|XP_003608551.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
gi|355509606|gb|AES90748.1| hypothetical protein MTR_4g097380 [Medicago truncatula]
Length = 375
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/241 (39%), Positives = 135/241 (56%), Gaps = 15/241 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVM-----PTEEHTSIEFT 55
MDVF+V D G K+ DK ++++I+Q L + + SS V P E + +IE
Sbjct: 95 MDVFHVKDQIGNKLTDKSLVNHIEQILCECTAKSNGETSSETVQHCCKGPQEANVAIEVI 154
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
GTDRPGLFSE+ VL DL N+++A+ WTHND+ +++ D S I + +RL+ + +
Sbjct: 155 GTDRPGLFSEISVVLMDLGFNIISAKAWTHNDKVVCIIYPEDASRPGPINERERLAQVVD 214
Query: 116 LLFNVL-----RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 170
+ NV+ +G D R S G + ERRLHQ+M+ DYE G + +
Sbjct: 215 QIRNVIEANEGKGDKDMRSVVLKSSTTGHSHTERRLHQMMYAASDYESCHACHGDNDSEH 274
Query: 171 SRP----QVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
R V+V + +DY V+ +RS+DRPKLLFDIVC LTDMQY VFH V + A
Sbjct: 275 KRQYDGTHVSVDRYQGRDYWVVNVRSRDRPKLLFDIVCMLTDMQYEVFHAAVTSNSPMAE 334
Query: 226 Q 226
Q
Sbjct: 335 Q 335
>gi|326507160|dbj|BAJ95657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 267
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/243 (40%), Positives = 139/243 (57%), Gaps = 19/243 (7%)
Query: 3 VFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSLRSSVGVMP--TEEHTSIEFTGTD 58
VF+V D +G K+ K+ I+YI+Q + T S F + + + P +T IE G +
Sbjct: 18 VFHVRDQEGNKVYSKKAINYIEQAICTRDSGRFTVTRSNELASKPDVATHYTGIEMIGHN 77
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 118
RPG+FSE+ AVLA+ CNV+ A W+H D A V V+D ST I DP RL++I++ L
Sbjct: 78 RPGIFSEISAVLAEQGCNVMEAHAWSHKDSLACVAFVSDESTSTRINDPDRLASIQDHLC 137
Query: 119 NVLRGY----DDFRKAKTS-LSPPGIMNR-ERRLHQIMFDDRDYE----RVEKAVGRVE- 167
VL +D R+A+ L G+ + ERRLHQ+MF +D++ +V A +
Sbjct: 138 TVLGPGTSVDEDGRRARAHLLGVDGLTSHPERRLHQLMFASKDFDGQPGQVSAAFPMLSL 197
Query: 168 ---DKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
K SR V+V EK Y+VI++ DRPKL+FD VCTLTDMQ+ VFH V++
Sbjct: 198 DGYKKGSRTVVSVDRCNEKGYSVISVECVDRPKLMFDTVCTLTDMQFDVFHASVSSCGPF 257
Query: 224 AYQ 226
A Q
Sbjct: 258 ACQ 260
>gi|255646078|gb|ACU23526.1| unknown [Glycine max]
Length = 135
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/131 (49%), Positives = 90/131 (68%), Gaps = 3/131 (2%)
Query: 233 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 292
+DG + ++ E+ERVIQ +EAAI RR SEG+ LELC +DRVGLLS++TRI REN L++ R
Sbjct: 1 MDGCTLDTQGEKERVIQRIEAAIRRRVSEGVSLELCAKDRVGLLSEVTRILRENGLTVCR 60
Query: 293 AEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKL-QVKR--STILAPKPPKET 349
A +ST G + + FYV D +GNPVD K ++++R++IG T + VKR S AP+
Sbjct: 61 AGVSTRGEQALNVFYVRDASGNPVDMKTMEALRKEIGKTMMVDVKRVPSNAKAPETRGWA 120
Query: 350 TTGFFLGNFFK 360
T FF GN +
Sbjct: 121 KTSFFFGNLLE 131
>gi|222640928|gb|EEE69060.1| hypothetical protein OsJ_28067 [Oryza sativa Japonica Group]
Length = 314
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 86/127 (67%), Gaps = 10/127 (7%)
Query: 191 SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQC 250
KDRP LL ++ LTD++ + + +E+YIRH+D P++S ER+R+ +C
Sbjct: 136 GKDRPGLLSEVFAVLTDLKCNIV----------SSEEYYIRHLDDSPVTSGDERDRLGRC 185
Query: 251 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEAAI+RR +EGL LEL EDRVGLLSD+TRIFRE+ LS+ AE++T G + + FYV
Sbjct: 186 LEAAIQRRNTEGLRLELYCEDRVGLLSDVTRIFREHGLSVTHAEVATRGARAANVFYVVA 245
Query: 311 VTGNPVD 317
+G PV+
Sbjct: 246 ASGEPVE 252
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDA-SF-APSLRS-SVGVMPTEEHTSIEFTGT 57
MD +N K+ D VID I+ L + SF AP RS + T+IE G
Sbjct: 85 MDGWN-------KLYDGLVIDRIELSLGAGSLSFRAPPERSVELEAEAAAAQTAIELIGK 137
Query: 58 DRPGLFSEVCAVLADLHCNVVNAE 81
DRPGL SEV AVL DL CN+V++E
Sbjct: 138 DRPGLLSEVFAVLTDLKCNIVSSE 161
>gi|159463310|ref|XP_001689885.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283873|gb|EDP09623.1| predicted protein [Chlamydomonas reinhardtii]
Length = 580
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 107/395 (27%), Positives = 177/395 (44%), Gaps = 75/395 (18%)
Query: 7 IDCDGKKIRDK-EVIDYIQQRLETDASFAPSLRSSVGVM--PTEEHTSIEFTGTDRPGLF 63
I DG D+ V D ++ L D + VGV ++ T E G DR GL
Sbjct: 178 ISSDGGWFVDEFHVTDAGKKVLSVDTDPGSDAEADVGVFEEASQCSTVFELAGNDRIGLL 237
Query: 64 SEVCAVLADLHC--------NVVNAEIWTHNDRAAAVVHVTDHST--------------- 100
+EV A+L + C V +A +WTHN R A V+ V + S
Sbjct: 238 AEVIALLKNNGCEVGPGAWGQVRSAAVWTHNHRVAFVISVLEASASATAGAVAAPAPGGG 297
Query: 101 ----GYAIKDPKRLSTIKELLFNVL--RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDR 154
IKD +L+ +++LL ++ G D T+ G+++ ERRLHQ++ +
Sbjct: 298 VGGGSCPIKDGIKLARLRQLLLGMMDPSGQDSVVNVATT---KGLIHYERRLHQLLLKEE 354
Query: 155 DYE-----RVEKAVGRVEDKSSRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDM 208
+ + + A + +P+V++ + ++ +Y +I++R +DR KLLFD VCTL D+
Sbjct: 355 EAQWRRAGELAAAYEAELAELQKPEVSIQHTKQHNYWMISIRCRDRQKLLFDTVCTLADL 414
Query: 209 QYVVFHGMVNT--------GR--TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERR 258
Y V+HG V+ G+ + A Q FY+R G + ++ LE AI+RR
Sbjct: 415 NYDVYHGAVDCEVERERAHGQPLSIAVQTFYLRPRFGDCVWDAKRAAKLKYMLEVAIQRR 474
Query: 259 ASEGLELELC-------------------TEDRVGLLSDITRIFRENSLSIKRAEISTIG 299
G ++ + T D L +T ++R+ L I RA++ +
Sbjct: 475 QPTGTKVHISGVPASAAAAASGAGGGGGATSD----LPALTAVWRDFGLCISRAKVRALA 530
Query: 300 GKVKD-TFYVTDVTGNPVDPKIIDSIRRQIGHTKL 333
G + TFY+ D G P ++ + +QIG +L
Sbjct: 531 GAAGEHTFYLVDRNGLPPADTVVQAACQQIGGVRL 565
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 26/185 (14%)
Query: 130 AKTSLSPPGIMNR--------ERRLHQIMFDDRDYERVEKAVGR---------------V 166
A T + PP MN R + F D Y E+A R +
Sbjct: 69 ASTPVGPPVAMNAILLRTLQPPRTPSLLAFSD--YREAEQANARHSSTTATGALLEYETL 126
Query: 167 EDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
E + P V V N D T+IT+ S +RP L ++V LT++ V +++
Sbjct: 127 ELRVHPPNVVVDNESYSDRTLITLDSANRPGTLVEVVQLLTELGLCVTKARISSDGGWFV 186
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRE 285
EF++ +S + + + E + EL DR+GLL+++ + +
Sbjct: 187 DEFHVTDAGKKVLSVDTDPGSDAEADVGVFEEASQCSTVFELAGNDRIGLLAEVIALLKN 246
Query: 286 NSLSI 290
N +
Sbjct: 247 NGCEV 251
>gi|294460772|gb|ADE75960.1| unknown [Picea sitchensis]
Length = 178
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/177 (35%), Positives = 99/177 (55%), Gaps = 13/177 (7%)
Query: 187 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERER 246
+ ++S ++ +L DIV L D ++ +++ F++ DG ++ E +
Sbjct: 1 MQIQSANKHGILLDIVQVLVDFDLLISKAYISSDGVWVMDVFHVTDSDGNKVTDEGLIDH 60
Query: 247 VIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTF 306
+ Q G LELC D++G LSD TRIFREN LS+ RA+I++ K D F
Sbjct: 61 IQQ------------GTRLELCRTDQIGPLSDATRIFRENGLSVTRADITSRDEKGVDVF 108
Query: 307 YVTDVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKART 363
YVTDV GN VD K +++IR++IG LQVK S++ P+E ++ F G+ FK+++
Sbjct: 109 YVTDVAGNFVDSKTVEAIRQEIGKRALQVKESSMHVDSSPQE-SSAFSFGDLFKSQS 164
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 25/115 (21%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D DG K+ D+ +ID+IQQ T +E TD+
Sbjct: 39 MDVFHVTDSDGNKVTDEGLIDHIQQ-----------------------GTRLELCRTDQI 75
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
G S+ + + +V A+I + +++ V +VTD + + D K + I++
Sbjct: 76 GPLSDATRIFRENGLSVTRADITSRDEKGVDVFYVTDVAGNFV--DSKTVEAIRQ 128
>gi|302819653|ref|XP_002991496.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
gi|300140698|gb|EFJ07418.1| hypothetical protein SELMODRAFT_133620 [Selaginella moellendorffii]
Length = 109
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 68/97 (70%), Gaps = 2/97 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
LELCT+DRVGLLSD+TRIFREN LS+ RA++ST G K + FYVTD +GNPVD +I+++
Sbjct: 2 LELCTKDRVGLLSDVTRIFRENGLSVTRADVSTQGDKAVNVFYVTDASGNPVDRRIVEAT 61
Query: 325 RRQIGHTKLQVKRSTILAPKPPKETTTG--FFLGNFF 359
R++IG + LQVK T +P E + F G F
Sbjct: 62 RKEIGQSILQVKDLTPSSPNSQHEVASKSRFSFGTFL 98
>gi|22795259|gb|AAN08231.1| unknown protein, 5'-partial [Oryza sativa Japonica Group]
Length = 108
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/107 (50%), Positives = 70/107 (65%), Gaps = 1/107 (0%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDS 323
+LELCT D+VGLLS++TRIFRENSL++ RAE+ST G +TFYV D TG VD K IDS
Sbjct: 1 KLELCTNDKVGLLSEVTRIFRENSLTVTRAEVSTRGRMAVNTFYVRDSTGGTVDQKTIDS 60
Query: 324 IRRQIGHTKLQVKRSTILAPKPPKETTTGFFLGNFFKARTFQTFKLI 370
IR+ IG +QVK + KE+ T F N F+ R+ +F +
Sbjct: 61 IRQAIGQ-NIQVKGQPEPSEPQKKESPTWFLFANLFRPRSLYSFGMF 106
>gi|343173273|gb|AEL99339.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 98.2 bits (243), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/80 (57%), Positives = 59/80 (73%)
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
G DRPGL SE+ AVLAD CNVV +E+WTHN R A+VV++TD +TG+ I DP RL+ I+
Sbjct: 1 GRDRPGLLSEIFAVLADHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 116 LLFNVLRGYDDFRKAKTSLS 135
LL +VL G D R A T++S
Sbjct: 61 LLLSVLMGDRDKRSANTAVS 80
>gi|343173271|gb|AEL99338.1| ACT domain-containing protein, partial [Silene latifolia]
Length = 82
Score = 95.9 bits (237), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/80 (56%), Positives = 58/80 (72%)
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
G DRPGL SE+ AVL D CNVV +E+WTHN R A+VV++TD +TG+ I DP RL+ I+
Sbjct: 1 GRDRPGLLSEIFAVLTDHKCNVVASEVWTHNSRMASVVYITDEATGFPIDDPARLAHIEH 60
Query: 116 LLFNVLRGYDDFRKAKTSLS 135
LL +VL G D R A T++S
Sbjct: 61 LLLSVLMGDRDKRSANTAVS 80
>gi|12039282|gb|AAG46072.1|AC079830_12 hypothetical protein [Oryza sativa Japonica Group]
Length = 222
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 77/127 (60%), Gaps = 10/127 (7%)
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAV 163
D +R++ I+ L ++L G + P + + ERRLHQ+M DRD E E+A
Sbjct: 97 DTERMARIEAHLGHLLHGDSSSVGGSAVATVPAASVAHAERRLHQLMSPDRDQE--ERAT 154
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
S RP V+V + +E+ Y+V+T++ + RPKLL D+VCTLTDM YVVFH ++T
Sbjct: 155 -----TSPRPAVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGD 209
Query: 223 EAYQEFY 229
+A+QE +
Sbjct: 210 QAHQESH 216
>gi|297846572|ref|XP_002891167.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
gi|297337009|gb|EFH67426.1| hypothetical protein ARALYDRAFT_891163 [Arabidopsis lyrata subsp.
lyrata]
Length = 113
Score = 89.0 bits (219), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/92 (50%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
Query: 68 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 127
AVL+DL+C+VV+A++WTHN R A V+++ D S+G I D +R+S I+ L NVL +D
Sbjct: 3 AVLSDLNCDVVDAKLWTHNGRVAYVIYLRDGSSGAPILDSQRISKIEGWLKNVLNVDNDV 62
Query: 128 RK-AKTSLSPPGIMNRERRLHQIMFDDRDYER 158
AKT +S +M+ E RLHQ+MF+ RDYER
Sbjct: 63 NSAAKTCVSMDSMMHIEHRLHQLMFEVRDYER 94
>gi|357437023|ref|XP_003588787.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
gi|355477835|gb|AES59038.1| Translation factor EF-1 alpha - like protein [Medicago truncatula]
Length = 168
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 83/131 (63%), Gaps = 8/131 (6%)
Query: 174 QVTVLNIEK-DYTVITMRSKDRPK-LLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
QV + N K D TV+ + S ++ +L D++ LTDM + + +++ E++IR
Sbjct: 29 QVCIDNESKEDCTVVKVDSVNKHGGVLLDMLHVLTDMNFQIIKSYISS------DEYFIR 82
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIK 291
H++G +++ +E+E++I+ +EAAIERR E ++LEL ++ VG LSDI+R+ RENSL I
Sbjct: 83 HINGYALNTTSEKEQLIKFIEAAIERRVCESVKLELSADNSVGFLSDISRVLRENSLVIV 142
Query: 292 RAEISTIGGKV 302
RA I+ V
Sbjct: 143 RAFINLFSSLV 153
>gi|108710368|gb|ABF98163.1| ACT domain-containing protein, putative [Oryza sativa Japonica
Group]
Length = 122
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 8/102 (7%)
Query: 129 KAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVI 187
A ++ + + ERRLHQ+M DRD E E+A S RP V+V + +E+ Y+V+
Sbjct: 22 SAVATVPAASVAHAERRLHQLMSPDRDQE--ERAT-----TSPRPAVSVQSCVERGYSVV 74
Query: 188 TMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 229
T++ + RPKLL D+VCTLTDM YVVFH ++T +A+QE +
Sbjct: 75 TVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAHQESH 116
>gi|218193487|gb|EEC75914.1| hypothetical protein OsI_12989 [Oryza sativa Indica Group]
Length = 119
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 10/123 (8%)
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPG--IMNRERRLHQIMFDDRDYERVEKAVGRVE 167
++ I+ L ++LRG + P + + ERRLHQ+M DRD E E+A
Sbjct: 1 MARIEAHLGHLLRGDSSSVSGSAVATVPATSVAHAERRLHQLMSPDRDQE--ERAT---- 54
Query: 168 DKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
S RP V+V + +E+ Y+V+T++ + RPKLL D+VCTLTDM YVVFH ++T +A+Q
Sbjct: 55 -TSPRPAVSVQSCVERGYSVVTVQCRYRPKLLLDVVCTLTDMDYVVFHSTIDTTGDQAHQ 113
Query: 227 EFY 229
E +
Sbjct: 114 ESH 116
>gi|302841007|ref|XP_002952049.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
gi|300262635|gb|EFJ46840.1| hypothetical protein VOLCADRAFT_121048 [Volvox carteri f.
nagariensis]
Length = 735
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 89/163 (54%), Gaps = 9/163 (5%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTS-----IEFT 55
+D F+V D GKK+ ++ + I++ L DA P + GV E S E
Sbjct: 109 VDEFSVTDA-GKKVTNERKLRAIRKVLSVDAD--PGSDNESGVDSAFEEASQCSTLFELA 165
Query: 56 GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE 115
G DR GL ++V +L C V +A +WTHN R A V+ V D STG IKD +L+ +++
Sbjct: 166 GNDRIGLLADVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLARLRQ 225
Query: 116 LLFNVLRGYDDFRKAKTSLS-PPGIMNRERRLHQIMFDDRDYE 157
LL N++ D ++ ++S G+++ ERRLHQ++ + + +
Sbjct: 226 LLLNMMHTPGDVAESVVNVSNTKGLIHYERRLHQLLLREEEAQ 268
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 172 RPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN---------TGR 221
+P+V V + ++DY ++ +R +DR KLLFD VCTL D+ Y V+HG V+
Sbjct: 504 KPEVFVQHSKQRDYWMVNIRCRDRQKLLFDTVCTLADLNYDVYHGAVDCELDRDKAGAKV 563
Query: 222 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGL------ 275
+ A Q FY+R G + ++ LE AI+RR +G ++ + G
Sbjct: 564 SIAVQTFYMRPRYGDAYWDPRKAAKLKYMLECAIQRRQPQGTKVHIQGAPSSGSGGSGGA 623
Query: 276 ----LSDITRIFRENSLSIKRAEISTIGGKVKD-TFYVTDVTGNPVDPKIIDSIRRQIGH 330
L +T ++R+ L I RA++ + G + TFY+ D G P ++ +QIG
Sbjct: 624 PAADLPALTAVWRKFGLCITRAKVRALAGSAGEHTFYLVDNFGRPPAEAVVQQACQQIGG 683
Query: 331 TKL 333
+L
Sbjct: 684 VRL 686
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 17/172 (9%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P V + N D T+IT+ S +RP L ++V LT++ V +++ EF +
Sbjct: 56 PNVNIDNETYADRTLITLDSANRPGTLVEVVQLLTELGLCVIKARISSDGGWFVDEFSVT 115
Query: 232 HVDGLPISSEAERERVIQCL--------------EAAIERRASEGLELELCTEDRVGLLS 277
G +++E + + + L ++A E + EL DR+GLL+
Sbjct: 116 DA-GKKVTNERKLRAIRKVLSVDADPGSDNESGVDSAFEEASQCSTLFELAGNDRIGLLA 174
Query: 278 DITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV-TGNPVDPKIIDSIRRQI 328
D+ + + N ++ A + T + V D TG P+ I + RQ+
Sbjct: 175 DVIELLKINGCEVRSAAVWTHNLRCAFVISVLDCSTGLPIKDNIKLARLRQL 226
>gi|297600649|ref|NP_001049552.2| Os03g0247900 [Oryza sativa Japonica Group]
gi|255674366|dbj|BAF11466.2| Os03g0247900 [Oryza sativa Japonica Group]
Length = 177
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 50/75 (66%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
+G+ LEL DR GLL+ +TR+FREN LS+ AEI+T + F+VTDV G P DPK
Sbjct: 58 QGVRLELRISDRRGLLAYVTRVFRENGLSVTHAEITTRDDMAMNVFHVTDVAGRPADPKT 117
Query: 321 IDSIRRQIGHTKLQV 335
ID + ++IG L+V
Sbjct: 118 IDEVIQRIGTESLRV 132
>gi|83594868|ref|YP_428620.1| PII uridylyl-transferase [Rhodospirillum rubrum ATCC 11170]
gi|386351633|ref|YP_006049881.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
gi|91206753|sp|Q2RNG2.1|GLND_RHORT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|83577782|gb|ABC24333.1| GlnB (protein PII) uridylyltransferase, GlnD [Rhodospirillum rubrum
ATCC 11170]
gi|346720069|gb|AEO50084.1| PII uridylyl-transferase [Rhodospirillum rubrum F11]
Length = 936
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 105/236 (44%), Gaps = 31/236 (13%)
Query: 36 SLRSSVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 93
L +V V+P E + + D PGLFS++ +A N+++A+I T +D A +
Sbjct: 711 GLTVAVEVLPDPERAVSEVLVATDDHPGLFSKIAGAMALAGVNILDAKITTMSDGGALDI 770
Query: 94 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 153
G+AI+ +R++ + + + +VL G KA PP + R R L
Sbjct: 771 FTVQTLEGHAIEKEERIARLAKTVRDVLTGDLPLEKALRR-QPPRLPERTRHL------- 822
Query: 154 RDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 212
+ P+V V N K +TVI + +DRP L+ + LTD+ +
Sbjct: 823 ----------------TVPPRVIVDNQASKTHTVIEINGRDRPGFLYAVTRALTDVAVQI 866
Query: 213 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI----ERRASEGLE 264
V+T FY++ V G+ I A+ ++ + LEAAI R+ EG E
Sbjct: 867 SSARVSTYGERVVDSFYVKDVFGMKIVHRAKLAQIREALEAAITQTVPRKVEEGAE 922
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR G L +TR + ++ I A +ST G +V D+FYV DV G +
Sbjct: 841 IEINGRDRPGFLYAVTRALTDVAVQISSARVSTYGERVVDSFYVKDVFGMKI 892
>gi|357030935|ref|ZP_09092879.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
gi|356415629|gb|EHH69272.1| PII uridylyl-transferase [Gluconobacter morbifer G707]
Length = 945
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 87/213 (40%), Gaps = 24/213 (11%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDAEGCS 804
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
++P +L + L+ L G D R+ S G+ R R +H
Sbjct: 805 FEEPHQLGRLNHLVEQALSGRLDIRQGIAEASHHGLSRRMRAIH---------------- 848
Query: 164 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V + N D +TVI + +DRP LL D+ L+ + + T
Sbjct: 849 -------VPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGM 901
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
A FY+R + G+ I R+ + L A++
Sbjct: 902 RAVDVFYVRDLLGMKIVDPVRLNRIREALLASL 934
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 10/87 (11%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ DR GLL D+T SL I A I+T G + D FYV D+ G KI+D +
Sbjct: 866 IEVNGRDRPGLLHDVTSALSGQSLQISSAHITTYGMRAVDVFYVRDLLGM----KIVDPV 921
Query: 325 RRQIGHTKLQVKRSTILAPKPPKETTT 351
R +++ + + + PP+ T
Sbjct: 922 RLN------RIREALLASLTPPQPATA 942
>gi|413941730|gb|AFW74379.1| hypothetical protein ZEAMMB73_033208, partial [Zea mays]
Length = 76
Score = 68.9 bits (167), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/83 (46%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G+K+ D VI YIQQ L T A + P E T++E TG R
Sbjct: 1 MDVFHVTDRLGRKLTDASVIAYIQQSLGTWVEPAAA-------APPEGLTALELTGPGRA 53
Query: 61 GLFSEVCAVLADLHCNVVNAEIW 83
GL SEV AVLAD+ C V +A W
Sbjct: 54 GLLSEVFAVLADMQCGVADARAW 76
>gi|159483207|ref|XP_001699652.1| hypothetical protein CHLREDRAFT_186726 [Chlamydomonas reinhardtii]
gi|158281594|gb|EDP07348.1| predicted protein [Chlamydomonas reinhardtii]
Length = 756
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEA 242
+Y ++T+R +DR KL FD VCTL DM Y ++H +++ A Q FY+R G + E
Sbjct: 560 NYWLVTIRCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYVRPRYGECVWDER 619
Query: 243 ERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG-GK 301
++ LE+A++RR G ++ + + DR L++ + I RA++ G
Sbjct: 620 RAAKLRYMLESAVQRRFPRGTKVCVQSGDRSSLVA-LFSALSSGGFWITRADVRAHGHDN 678
Query: 302 VKDTFYVTDVTGN 314
F +TD G
Sbjct: 679 AVFEFTITDTRGQ 691
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 12/127 (9%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL--ETDASFAPSLRSSVGVMPTEEHTSIEFTGTD 58
+D F V + KI D+ I+ I++ L ETDA + E T E G D
Sbjct: 109 VDEFFVTETPKGKILDQRKINIIRKVLSIETDAERTARDK--------ELCTVFELAGRD 160
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 118
R GL + V +L C V++A +WT +DR A V+ T+ G + DP +L ++++L+
Sbjct: 161 RHGLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPPKLDRLEQILY 218
Query: 119 NVLRGYD 125
++L G D
Sbjct: 219 DMLGGGD 225
>gi|222625543|gb|EEE59675.1| hypothetical protein OsJ_12082 [Oryza sativa Japonica Group]
Length = 117
Score = 68.6 bits (166), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 54/83 (65%), Gaps = 8/83 (9%)
Query: 130 AKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVIT 188
A ++ + + ERRLHQ+M DRD E E+A S RP V+V + +E+ Y+V+T
Sbjct: 23 AVATVPAASVAHAERRLHQLMSPDRDQE--ERAT-----TSPRPAVSVQSCVERGYSVVT 75
Query: 189 MRSKDRPKLLFDIVCTLTDMQYV 211
++ + RPKLL D+VCTLTDM YV
Sbjct: 76 VQCRYRPKLLLDVVCTLTDMDYV 98
>gi|410943919|ref|ZP_11375660.1| PII uridylyl-transferase [Gluconobacter frateurii NBRC 101659]
Length = 948
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 80/200 (40%), Gaps = 24/200 (12%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCS 804
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
+DP +L + L+ L G D K G R R +H
Sbjct: 805 FEDPHQLGRLNHLVEQALSGRLDLEKGIAEARHRGASRRMRAIH---------------- 848
Query: 164 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V + N D +TVI + +DRP LL DI TL+ + + T
Sbjct: 849 -------VPPRVVMDNTASDRHTVIEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 223 EAYQEFYIRHVDGLPISSEA 242
A FY+R + G+ I+ A
Sbjct: 902 RAVDVFYVRDLLGMKITDPA 921
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL DITR + SL I A I+T G + D FYV D+ G + DP +
Sbjct: 866 IEINGRDRPGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVRDLLGMKITDPARLAH 925
Query: 324 IRRQI--GHTKLQVKRST 339
IR + T L VK+S
Sbjct: 926 IRDSLLSSLTPLPVKKSA 943
>gi|84515914|ref|ZP_01003275.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
gi|84510356|gb|EAQ06812.1| PII uridylyl-transferase [Loktanella vestfoldensis SKA53]
Length = 930
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PGLFS + LA + N+V+A +T D A V G ++ RL +
Sbjct: 745 FAMVDHPGLFSRMTGALALVGANIVDARTYTSKDGYATAVFWVQDGDGNPYEE-SRLQRL 803
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 173
++++ LRG R+A D+D + + RV+ K
Sbjct: 804 RQMIVRTLRGEVVAREA--------------------LKDKDKIKKRERAFRVDTK---- 839
Query: 174 QVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 232
+T N + YT+I + ++DRP LL+D+ TL + + ++ T + FY++
Sbjct: 840 -ITFDNDGSEIYTIIEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKD 898
Query: 233 VDGLPISSEAERERVIQCLEAAIERRASEGL 263
+ GL SEA+R+ + + L AI + A +
Sbjct: 899 MVGLKYYSEAKRQSLERKLREAIAQGAQRAI 929
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR + I A I+T G +V DTFYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLANAHVYIASAVIATYGEQVVDTFYVKDMVG 901
>gi|340778936|ref|ZP_08698879.1| PII uridylyl-transferase [Acetobacter aceti NBRC 14818]
Length = 988
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 95/217 (43%), Gaps = 27/217 (12%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLF+++ +A ++V+A I T ++ A +TG A
Sbjct: 776 LPARGVTEVTIHTQDHPGLFAQIAGAMALAGASIVDARIHTLSNGMALDTLWIQDATGEA 835
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRK--AKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 161
+P RL+ + + L G D AKT+ S +++R R +H
Sbjct: 836 FDEPHRLTKLFSITERALSGRLDIATEIAKTNASGQ-LLSRTRAIH-------------- 880
Query: 162 AVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
P+V + N +TVI + +DRP LL D+ L +M+ ++ + T
Sbjct: 881 ---------VPPRVVIDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTY 931
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257
A FY++ + G+ ++ E +++ L A +++
Sbjct: 932 GVRAVDVFYVKDLSGMKVTDENRLKKIRDRLMAGLKK 968
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 255 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ RAS +E+ DR GLL D+ E L I A I+T G + D FYV D++G
Sbjct: 887 IDNRASNSHTVIEINGRDRPGLLHDVASALNEMRLQIYSAHITTYGVRAVDVFYVKDLSG 946
Query: 314 NPV 316
V
Sbjct: 947 MKV 949
>gi|302850060|ref|XP_002956558.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
gi|300258085|gb|EFJ42325.1| hypothetical protein VOLCADRAFT_97579 [Volvox carteri f.
nagariensis]
Length = 763
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%)
Query: 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEA 242
+Y ++T++ +DR KL FD VCTL DM Y ++H +++ A Q FY+R G I E
Sbjct: 619 NYWLVTIQCRDRNKLFFDTVCTLADMNYDIYHATIDSEGDAASQLFYVRPRYGECIWDER 678
Query: 243 ERERVIQCLEAAIERRASEGLELELCTEDRVGLLS 277
++ LE+A++RR G ++ + + DR L++
Sbjct: 679 RAAKLRYMLESAVQRRFPRGTKVCVQSSDRSALVN 713
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
+D F V + K+ D I+ I++ L ++ + S + + T E G DR
Sbjct: 109 VDEFFVTETPKGKLLDPRKINIIRKVLSVESDSSASYKDK------DICTVFELAGRDRH 162
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
GL + V +L C V++A +WT +DR A V+ T+ G + DP +L ++++L+++
Sbjct: 163 GLLAAVLQLLVVNGCEVLSAAVWTFHDRVALVISATER--GAPVVDPVKLDRLEQILYDM 220
Query: 121 LRGYD 125
L D
Sbjct: 221 LGSGD 225
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT-GNPVDPKIIDSIRR 326
+ +R G L ++ + E LSI+ A IS+ GG D F+VT+ G +DP+ I+ IR+
Sbjct: 75 SANRPGTLIEVVQCLTELGLSIRCARISSDGGWFVDEFFVTETPKGKLLDPRKINIIRK 133
>gi|58040302|ref|YP_192266.1| PII uridylyl-transferase [Gluconobacter oxydans 621H]
gi|81170616|sp|Q5FPT6.1|GLND_GLUOX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|58002716|gb|AAW61610.1| [Protein-PII] uridylyltransferase [Gluconobacter oxydans 621H]
Length = 949
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 87/219 (39%), Gaps = 26/219 (11%)
Query: 40 SVGVMPTEEHTSIEFT--GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
+V P E E T D PGLFS++ LA ++V+A I T +D A
Sbjct: 744 TVEAYPIPERGVTELTVLCADHPGLFSQIAGALAVSGASIVDARIHTLSDGMALDTFWVQ 803
Query: 98 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 157
G + ++P +L + L+ L G D RK S R R +H
Sbjct: 804 DGEGCSFEEPHQLGRLNHLVEQALSGRLDIRKGIEDASHHSTSRRMRAIH---------- 853
Query: 158 RVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 216
P+V + N D +TVI + +DRP LL D+ L+ +
Sbjct: 854 -------------VPPRVVIDNTASDRHTVIEVNGRDRPGLLHDVTSALSSASLQISSAH 900
Query: 217 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
+ T A FY+R + G+ I+ R+ + L A++
Sbjct: 901 ITTYGMRAVDVFYVRDLLGMKITDPVRLARLRETLLASL 939
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 40/87 (45%), Gaps = 11/87 (12%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ DR GLL D+T SL I A I+T G + D FYV D+ G KI D +
Sbjct: 871 IEVNGRDRPGLLHDVTSALSSASLQISSAHITTYGMRAVDVFYVRDLLGM----KITDPV 926
Query: 325 RRQIGHTKLQVKRSTILAPKPPKETTT 351
R L R T+LA TT
Sbjct: 927 R-------LARLRETLLASLTSAPVTT 946
>gi|407799900|ref|ZP_11146768.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
gi|407057892|gb|EKE43860.1| PII uridylyl-transferase [Oceaniovalibus guishaninsula JLT2003]
Length = 930
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 33/215 (15%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I F +D PG+FS + LA + NVV+A +T D A V G+ DP +
Sbjct: 740 TRICFALSDHPGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWVQDGDGHPY-DPHK 798
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L ++ + +LRG ++ G+ R++ I +RD+ RV ++ +
Sbjct: 799 LPRLRGTIGKILRG--------EVIAREGLDTRDK----IKKRERDF-RVPTSIAFDNEG 845
Query: 170 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 229
S + YT++ + ++DRP LL+D+ TL + ++ T + FY
Sbjct: 846 S-----------EIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFY 894
Query: 230 IRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
++ + GL I S+A+ +AA+ER+ E ++
Sbjct: 895 VKDMFGLKIYSDAK--------QAALERKLREAID 921
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 260 SEGLEL----ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+EG E+ E+ T DR GLL D+TR +SI A I+T G +V DTFYV D+ G
Sbjct: 843 NEGSEIYTIVEVDTRDRPGLLYDLTRTLAIAHISISSAVIATYGAQVVDTFYVKDMFG 900
>gi|114770139|ref|ZP_01447677.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2255]
gi|114548976|gb|EAU51859.1| PII uridylyl-transferase [alpha proteobacterium HTCC2255]
Length = 931
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 107/255 (41%), Gaps = 47/255 (18%)
Query: 25 QRLETDASFA-PSLRSSVGVMPTEEH---------TSIEFTGTDRPGLFSEVCAVLADLH 74
Q L+T+ F +L ++G E H T +F D PG+FS + +A +
Sbjct: 707 QGLDTNTQFIFANLFKNLGSKKIESHFEVDQDRDATRAQFVMQDHPGIFSRLTGAIALAN 766
Query: 75 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG---YDDFRKAK 131
NV++A +T +D A V + G D +L +K+L+ L G D K +
Sbjct: 767 ANVIDARTYTTSDGYATPVFWIQDNDGKPF-DFSKLGKLKKLIDQTLAGDVIARDVLKVR 825
Query: 132 TSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVIT 188
P RER I FD++ + YT+I
Sbjct: 826 NKYKP-----RERNFKVPTDITFDNQGSDI-------------------------YTIIE 855
Query: 189 MRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVI 248
+ ++DR LLFD+ TL + + ++ T +A FY++ + GL I+SE +++ +
Sbjct: 856 VDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYVKDMIGLKITSENKQQIIK 915
Query: 249 QCLEAAIERRASEGL 263
L+ AIE A +
Sbjct: 916 GKLQEAIEVGAEASM 930
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ T DR LL D+TR ++ I A I+T G + D FYV D+ G KI
Sbjct: 854 IEVDTRDRHSLLFDLTRTLANANIQIASAVIATYGAQAVDVFYVKDMIG----LKITSEN 909
Query: 325 RRQIGHTKLQ 334
++QI KLQ
Sbjct: 910 KQQIIKGKLQ 919
>gi|407768112|ref|ZP_11115491.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407288825|gb|EKF14302.1| PII uridylyl-transferase [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 917
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 24/208 (11%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I TD PGLFS++ +A NVV+A+I T D A + G A D +
Sbjct: 731 TEIIVHTTDHPGLFSQIAGSMALCGANVVDAKILTLADGMALDTFFIQDTNGEAFNDKSK 790
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L +++ L V+ G L P + R + + D++ AV +VE
Sbjct: 791 LDKLRKTLEQVISG---------RLRPSQEIERRQ-----IKDNKH----RTAVFKVE-- 830
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P V + N + +TVI + ++DR LL+D+ TL D+ + ++T A F
Sbjct: 831 ---PNVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVF 887
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIE 256
Y++ V GL I S + +V + L +E
Sbjct: 888 YVKDVFGLKIDSRTKFLQVKETLTQTLE 915
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
+E+ DR GLL D+TR R+ SL I A IST G + D FYV DV G +D +
Sbjct: 846 IEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKDVFGLKIDSR 900
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 61/144 (42%), Gaps = 24/144 (16%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS--FAPSL------------RSSV-GVMP 45
+D F + D +G+ DK +D +++ LE S PS R++V V P
Sbjct: 772 LDTFFIQDTNGEAFNDKSKLDKLRKTLEQVISGRLRPSQEIERRQIKDNKHRTAVFKVEP 831
Query: 46 --------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
+ HT IE T DR GL +V L DL + +A I T +RA V +V D
Sbjct: 832 NVIIDNKASRTHTVIEITARDRQGLLYDVTRTLRDLSLQIASARISTFGERAVDVFYVKD 891
Query: 98 HSTGYAIKDPKRLSTIKELLFNVL 121
G I + +KE L L
Sbjct: 892 -VFGLKIDSRTKFLQVKETLTQTL 914
>gi|407772641|ref|ZP_11119943.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
gi|407284594|gb|EKF10110.1| PII uridylyl-transferase [Thalassospira profundimaris WP0211]
Length = 913
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I TD PGLFS++ +A NVV+A+I T D A + G A D +
Sbjct: 727 TEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADGMALDTFFVQDTNGEAFNDSTK 786
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L +++ L V+ G + P + R + +D + AV +VE
Sbjct: 787 LDRLRDTLEKVISG---------QIRPSQEIERRQ--------TKD-NKHRTAVFKVE-- 826
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P V + N + +TVI + ++DR LL+DI L D+ + ++T A F
Sbjct: 827 ---PNVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVF 883
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAI 255
Y++ V GL I S + +V + L AI
Sbjct: 884 YVKDVFGLKIDSRTKFVQVKETLTQAI 910
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 38/189 (20%)
Query: 169 KSSRPQVTV---LNIEKDYTVITMRSKDRPKLLFDIVCTLTDM-QYVVFHGMVNTGRTEA 224
++S ++TV ++ E D T IT+ + D P L I + VV ++ A
Sbjct: 708 RNSGAEITVDVRIDTEIDATEITVHTTDHPGLFSQIAGAMALCGANVVDAKILTLADGMA 767
Query: 225 YQEFYIRHVDGLPISSEAERERVIQCLEAAI--ERRASEGLE------------------ 264
F+++ +G + + +R+ LE I + R S+ +E
Sbjct: 768 LDTFFVQDTNGEAFNDSTKLDRLRDTLEKVISGQIRPSQEIERRQTKDNKHRTAVFKVEP 827
Query: 265 --------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
+E+ DR+GLL DITR R+ S+ I A IST G + D FYV D
Sbjct: 828 NVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKD 887
Query: 311 VTGNPVDPK 319
V G +D +
Sbjct: 888 VFGLKIDSR 896
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 24/145 (16%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLE--TDASFAPSL------------RSSV-GVMP 45
+D F V D +G+ D +D ++ LE PS R++V V P
Sbjct: 768 LDTFFVQDTNGEAFNDSTKLDRLRDTLEKVISGQIRPSQEIERRQTKDNKHRTAVFKVEP 827
Query: 46 --------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
+ HT IE T DR GL ++ L DL + +A I T +RA V +V D
Sbjct: 828 NVIIDNKASRTHTVIEITARDRLGLLYDITRALRDLSMQIASARISTFGERAVDVFYVKD 887
Query: 98 HSTGYAIKDPKRLSTIKELLFNVLR 122
G I + +KE L +R
Sbjct: 888 -VFGLKIDSRTKFVQVKETLTQAIR 911
>gi|414341139|ref|YP_006982660.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|411026474|gb|AFV99728.1| PII uridylyl-transferase [Gluconobacter oxydans H24]
gi|453330895|dbj|GAC87222.1| PII uridylyl-transferase [Gluconobacter thailandicus NBRC 3255]
Length = 948
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 80/200 (40%), Gaps = 24/200 (12%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS++ LA ++V+A I T +D A + G +
Sbjct: 745 IPDRGVTELTVLCADHPGLFSQIAGALAVAGASIVDARIHTLSDGMALDTFWVQDADGCS 804
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
+DP +L + L+ L G D K + G R R +H
Sbjct: 805 FEDPHQLGRLNHLVEQALSGRLDLEKGISEARHRGASRRMRAIH---------------- 848
Query: 164 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V + N D +TVI + +DR LL DI TL+ + + T
Sbjct: 849 -------VPPRVVIDNAASDRHTVIEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGM 901
Query: 223 EAYQEFYIRHVDGLPISSEA 242
A FY+R + G+ I+ A
Sbjct: 902 RAVDVFYVRDLLGMKITDAA 921
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ DR GLL DITR + SL I A I+T G + D FYV D+ G KI D+
Sbjct: 866 IEINGRDRSGLLHDITRTLSQQSLQISSAHITTYGMRAVDVFYVRDLLGM----KITDAA 921
Query: 325 RRQIGHTKLQVKRSTILAPKPPKETTT 351
R + H + + + L P P K+T T
Sbjct: 922 R--LAHIRASLLDT--LTPLPVKKTAT 944
>gi|381167755|ref|ZP_09876961.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
gi|380683128|emb|CCG41773.1| (Protein-PII) uridylyltransferase [Phaeospirillum molischianum DSM
120]
Length = 924
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
+TG D PGLFS++ +A N+V+A+I T + A S G P +L+ +
Sbjct: 733 YTG-DHPGLFSQIAGAMAVSGANIVDAKIITLTNGMALDTFFVQDSEGAPFDSPAKLNRL 791
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 173
+ VL G R A+ S G N R H R V++K SR
Sbjct: 792 ANTIEQVLSGR--LRLAQELASRKG--NLPSRAHVFKVPPRVL---------VDNKPSR- 837
Query: 174 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
+TVI + +DRP LL+DI +T + + ++T FY++ V
Sbjct: 838 ---------SHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDV 888
Query: 234 DGLPISSEAERERVIQCLEAAIERRAS 260
G + E + ER+ L AA++ + S
Sbjct: 889 FGHKVEHERKLERIRVTLLAALKEQNS 915
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 78/207 (37%), Gaps = 45/207 (21%)
Query: 178 LNIEKDYTVITMRSKDRPKLLFDIVCTLT-DMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
++ ++ T + + + D P L I + +V ++ A F+++ +G
Sbjct: 721 VDAQRAVTEMVVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLTNGMALDTFFVQDSEGA 780
Query: 237 PISSEAERERVIQCLEAAIERRASEGLEL------------------------------- 265
P S A+ R+ +E + R EL
Sbjct: 781 PFDSPAKLNRLANTIEQVLSGRLRLAQELASRKGNLPSRAHVFKVPPRVLVDNKPSRSHT 840
Query: 266 --ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDS 323
E+ DR GLL DIT + L I A IST G +V D FYV DV G+ V+ +
Sbjct: 841 VIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKDVFGHKVEHE---- 896
Query: 324 IRRQIGHTKLQVKRSTILAPKPPKETT 350
KL+ R T+LA + +T
Sbjct: 897 -------RKLERIRVTLLAALKEQNST 916
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
P+ HT IE G DRPGL ++ + + L + +A I T+ +R V +V D G+ +
Sbjct: 835 PSRSHTVIEINGRDRPGLLYDITSAMTQLGLQISSAHISTYGERVVDVFYVKD-VFGHKV 893
Query: 105 KDPKRLSTIKELLFNVLR 122
+ ++L I+ L L+
Sbjct: 894 EHERKLERIRVTLLAALK 911
>gi|329891103|ref|ZP_08269446.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
gi|328846404|gb|EGF95968.1| protein-P-II uridylyltransferase [Brevundimonas diminuta ATCC
11568]
Length = 812
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 102
P E + DRPGLF+++ A L+ +VV A + T +D A V G Y
Sbjct: 585 PLESTARVAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPY 644
Query: 103 AIKDPKRLST-IKELLFNVLRGYDDFRKAKTS-LSPPGIMNRERRLHQIMFDDRDYERVE 160
++P+RL+ +K + VL+G A+TS L PP + R + +FD R R++
Sbjct: 645 GGREPRRLAILVKAMERAVLKG------ARTSTLEPPRVSAR-----RAVFDVRPVVRID 693
Query: 161 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
G VI + DRP LL D+ T++ Y V +
Sbjct: 694 ADTG-----------------TSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASF 736
Query: 221 RTEAYQEFYIRHVDGLPISSEAERE 245
A FYI DG S+A E
Sbjct: 737 GERAVDGFYITDADGRKPKSKARLE 761
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 62/160 (38%), Gaps = 33/160 (20%)
Query: 187 ITMRSKDRPKLLFDIVCTLTDMQY-VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERE 245
+ + ++DRP L D+ TL+ VV + A F I+ G P R
Sbjct: 592 VAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPYGGREPRR 651
Query: 246 RVI--QCLEAAI---------------ERRA---------------SEGLELELCTEDRV 273
I + +E A+ RRA + + +E+ DR
Sbjct: 652 LAILVKAMERAVLKGARTSTLEPPRVSARRAVFDVRPVVRIDADTGTSAVVIEVSGADRP 711
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
GLL+D+ R + S + A +++ G + D FY+TD G
Sbjct: 712 GLLADLARTISAHGYSTRSAHVASFGERAVDGFYITDADG 751
>gi|51244781|ref|YP_064665.1| [protein-PII] uridylyltransferase [Desulfotalea psychrophila LSv54]
gi|50875818|emb|CAG35658.1| probable [Protein-PII] uridylyltransferase [Desulfotalea
psychrophila LSv54]
Length = 856
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 91/215 (42%), Gaps = 24/215 (11%)
Query: 38 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
+S V V E+ I DRPGL +++C VLA + V A+I+T D V
Sbjct: 656 KSLVKVFEGEDDWKILLMSHDRPGLLAKLCGVLALHNLAVAMAQIFTWEDGVIVDVVTVR 715
Query: 98 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 157
G D + +D FR A L+ ++ +L+Q Y
Sbjct: 716 PQDGAGFSD---------------KDWDSFR-ADIDLALSHRLDLGHKLYQKW--QTTYG 757
Query: 158 RVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 216
R + VG ++ P+V V N D Y+V+ + + DRP LL+ + TL D ++
Sbjct: 758 RKAELVGAID-----PRVVVDNESSDTYSVLEVYAVDRPHLLYHLAQTLADFGVNIYKAY 812
Query: 217 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 251
+ T + FY+ G + ++ RE ++Q L
Sbjct: 813 IATEVEQLIDVFYVLDSRGEKLLGDSLREDIVQAL 847
>gi|46390848|dbj|BAD16352.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 224
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 12/114 (10%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G K+ + VI YI+Q L M E T++E TG R
Sbjct: 27 MDVFHVTDRLGCKLTNDSVITYIEQSLGM-------WNGPTRPMALEGLTALELTGAGRT 79
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIK 114
GL SEV AVLAD+ C VV W H ++ + + T D +R++ I+
Sbjct: 80 GLISEVFAVLADMDCGVVEGRAWMHRVHLGCLIFLRNKET-----DTERMARIE 128
>gi|114327079|ref|YP_744236.1| PII uridylyl-transferase [Granulibacter bethesdensis CGDNIH1]
gi|114315253|gb|ABI61313.1| [protein-PII] uridylyltransferase [Granulibacter bethesdensis
CGDNIH1]
Length = 963
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 83/213 (38%), Gaps = 24/213 (11%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGL ++ LA ++V+A I T + A ++G A
Sbjct: 749 LPARAVTEVTVYVADTPGLVGKIAGALAVAGASIVDARIHTMTNGMAMDTFWVQDTSGEA 808
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
P RL+ I L+ L G D + S P + R R +H
Sbjct: 809 FDQPNRLAKIAVLIEQALSGQLDIDEEIRKASNPLLGTRMRAIH---------------- 852
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V V N +TV+ + +DRP L+ DI + + + T
Sbjct: 853 -------VPPRVVVDNHASHTHTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGV 905
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
A FY++ V GL + +E + ++ Q L A+
Sbjct: 906 RAVDVFYVKDVFGLKVENERKLAKLRQALLGAL 938
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
HT +E G DRPGL ++ A +A + +A I T+ RA V +V D G +++ +
Sbjct: 867 HTVLEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVKD-VFGLKVENER 925
Query: 109 RLSTIKELLFNVLRGYDD 126
+L+ +++ L L DD
Sbjct: 926 KLAKLRQALLGALTSPDD 943
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
LE+ DR GL+ DI + L I A I+T G + D FYV DV G V+
Sbjct: 870 LEVNGRDRPGLMHDIAAAIAQQGLQIASAHITTYGVRAVDVFYVKDVFGLKVE 922
>gi|365858204|ref|ZP_09398157.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
gi|363714593|gb|EHL98089.1| protein-P-II uridylyltransferase [Acetobacteraceae bacterium
AT-5844]
Length = 932
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 29/230 (12%)
Query: 28 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-N 86
E +A+ AP L S V+ T + TD PGLFS + LA ++V+A I T N
Sbjct: 720 EAEATGAP-LTVSTRVLEARSVTEVTVYVTDHPGLFSRIAGALAVAGASIVDARIHTMTN 778
Query: 87 DRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRL 146
RA V D + G A P +L+ + L+ L G +
Sbjct: 779 GRALDTFWVQD-AQGGAFDSPHKLARLSVLIEQALSGRLNL------------------- 818
Query: 147 HQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTL 205
D++ +V + R+ +V + N + +TVI + +DRP LL D+ +
Sbjct: 819 ------DQEIRKVRREPSRLRAVQVPGRVVIDNHASNTHTVIELNGRDRPGLLHDMTAAI 872
Query: 206 TDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
++ + + T A FY++ V GL I +E + + + L AA+
Sbjct: 873 SEQGLQIASAHITTYGVRAVDVFYVKDVFGLKIENERKLASLREALLAAL 922
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+EL DR GLL D+T E L I A I+T G + D FYV DV G
Sbjct: 854 IELNGRDRPGLLHDMTAAISEQGLQIASAHITTYGVRAVDVFYVKDVFG 902
>gi|85704123|ref|ZP_01035226.1| PII uridylyl-transferase [Roseovarius sp. 217]
gi|85671443|gb|EAQ26301.1| PII uridylyl-transferase [Roseovarius sp. 217]
Length = 921
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+FS + LA + NVV+A +T D A V + G+ + RL +
Sbjct: 736 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDADGHPF-ESDRLPRL 794
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
+ ++ L+G R+A S + RER I FD+ E
Sbjct: 795 RNMIQKTLKGEVVPREAIKSRDK--LKKRERAFRVPTHITFDNDGSE------------- 839
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + ++ T + FY+
Sbjct: 840 ------------IYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
+ + GL SE++R + + L AAI +EG+E
Sbjct: 888 KDMFGLKFHSESKRAALERKLRAAI----AEGVE 917
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR N++ I A I+T G +V DTFYV D+ G
Sbjct: 844 IEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFG 892
>gi|149200755|ref|ZP_01877730.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
gi|149145088|gb|EDM33114.1| PII uridylyl-transferase [Roseovarius sp. TM1035]
Length = 921
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 35/214 (16%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+FS + LA + NVV+A +T D A V + G+ + RL +
Sbjct: 736 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAVFWIQDADGHPF-EADRLPRL 794
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
+ ++ L+G R+A S + RER I FD+ E
Sbjct: 795 RNMIQKTLKGEVVPREAIKSRDK--LKKRERAFRVPTHITFDNDGSE------------- 839
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + ++ T + FY+
Sbjct: 840 ------------IYTIIEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYV 887
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
+ + GL S+++R + + L AAIE EG+E
Sbjct: 888 KDMFGLKFHSDSKRAALERKLRAAIE----EGVE 917
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR N++ I A I+T G +V DTFYV D+ G
Sbjct: 844 IEVDTRDRPGLLYDLTRTLAANNVYIASAVIATFGEQVVDTFYVKDMFG 892
>gi|340028705|ref|ZP_08664768.1| PII uridylyl-transferase [Paracoccus sp. TRP]
Length = 928
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 89/208 (42%), Gaps = 27/208 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T F D PG+FS + LA + N+V+A +T D A V + G+ R
Sbjct: 730 TRAAFVLADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYAS-DR 788
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L ++ ++ L+G I+ RE DRD + ++ R
Sbjct: 789 LPRLRAMIQRTLKGE--------------IVARE------ALADRDKPKKRESAFRFPT- 827
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
+T N D YTVI + ++DRP LL+D+ TL D + ++ T + F
Sbjct: 828 ----HITFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTF 883
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIE 256
Y++ + GL + + RE + + L AI+
Sbjct: 884 YVKDMFGLKLHQQNRREALEKKLRQAIK 911
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR +N + I A I+T G +V DTFYV D+ G
Sbjct: 842 IEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFG 890
>gi|254510379|ref|ZP_05122446.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
gi|221534090|gb|EEE37078.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium KLH11]
Length = 919
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 35/212 (16%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
FT D PG+F+ + LA + NVV+A +T D + G+ + RL +
Sbjct: 734 FTMGDHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWVQDAEGHPF-EAARLPRL 792
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
+++ L+G R+A S I RER + I FD+ E
Sbjct: 793 TQMIHKTLKGEVVAREALKSRDK--IKKRERAFNVPTHITFDNEGSE------------- 837
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL D + + ++ T + FY+
Sbjct: 838 ------------IYTIIEVDTRDRPGLLYDLTRTLADANVYIANAVIATYGEQVVDTFYV 885
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEG 262
+ + GL SE++ ++ LEA + +EG
Sbjct: 886 KDMFGLKYHSESK----LRGLEAKLRTAITEG 913
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR + ++ I A I+T G +V DTFYV D+ G
Sbjct: 842 IEVDTRDRPGLLYDLTRTLADANVYIANAVIATYGEQVVDTFYVKDMFG 890
>gi|254465168|ref|ZP_05078579.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
gi|206686076|gb|EDZ46558.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium Y4I]
Length = 946
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 86/205 (41%), Gaps = 31/205 (15%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+F+ + LA + NVV+A +T D S G+ DP RL +
Sbjct: 761 FVMEDHPGIFARIVGALALVGANVVDARSYTTKDGYVTDAFWIQDSEGHPF-DPMRLHRL 819
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
K+++ L+G R A S I RER I FD+ E
Sbjct: 820 KQMIEKTLKGEVIARDALKSRDK--IKKRERAFKVPTHITFDNEGSE------------- 864
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 865 ------------IYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYV 912
Query: 231 RHVDGLPISSEAERERVIQCLEAAI 255
+ + GL SE+++ + + L AI
Sbjct: 913 KDMFGLKYYSESKQRMLDRKLREAI 937
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R ++ I A I+T G +V D FYV D+ G
Sbjct: 869 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDAFYVKDMFG 917
>gi|84499734|ref|ZP_00998022.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
gi|84392878|gb|EAQ05089.1| PII uridylyl-transferase [Oceanicola batsensis HTCC2597]
Length = 919
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 29/211 (13%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+FS + LA + NVV+A +T D A + G+ + R+ +
Sbjct: 734 FAMEDHPGIFSRLAGALALVGANVVDARTFTSKDGYATAAFWIQDADGHPY-ESARIPRL 792
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 173
++++ L+G R+A S I RER RV A+ + S
Sbjct: 793 RQMILKTLKGEVVPREAMKSRDK--IKKRERAF-----------RVSTAISFDNEGS--- 836
Query: 174 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHV 233
+ +T+I + ++DRP LLFD+ TL + ++ T + FY++ +
Sbjct: 837 --------EIFTIIEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQVVDTFYVKDM 888
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGLE 264
GL + SE ++ + LEA + SEG E
Sbjct: 889 FGLKLYSETKQ----KALEAKLREAISEGQE 915
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR LL D+TR ++ I A I+T G +V DTFYV D+ G
Sbjct: 842 IEVDTRDRPALLFDLTRTLAAANVQISSAVIATYGEQVVDTFYVKDMFG 890
>gi|384083336|ref|ZP_09994511.1| PII uridylyl-transferase [gamma proteobacterium HIMB30]
Length = 887
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 130/317 (41%), Gaps = 73/317 (23%)
Query: 66 VCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD----PKRLSTIKELLFNVL 121
+C +AD+ N E+WT + RA + + +T + + P R++ I+E
Sbjct: 578 LCLTVADI--TATNPELWT-SWRATLLRQLYHGTTDFLTRGLDSLPGRVAYIEET----- 629
Query: 122 RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIE 181
++ +L P I +R + E V D+ + T++++E
Sbjct: 630 ------KQDALTLVRPSIRSRADAFW-------NQWSQEYFVSHSSDELAWHLETLIDVE 676
Query: 182 KDYTVITMRSK----------------DRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
D TVI + + +R L D+ +D+ V ++T
Sbjct: 677 NDETVIALAANQTLTDIGSTQVLVSTPNRVHLFADLTACFSDLGLSVLDAKLHTSDAGRS 736
Query: 226 QEFYIRHVDGL--PISSEAERERVIQCLEAA-----IER-------RASEGLEL------ 265
+ +I D P+++ ++ER+++ LE A +E RA + L
Sbjct: 737 IDIFIIQHDATCQPVTASDDQERLLRGLEQAALGQYVENAGTRRTPRAHKYFNLPANVSI 796
Query: 266 -----------ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
EL DR GLL+ + R+F E L + A+I+T+G +V+D FYVTD GN
Sbjct: 797 RPDLEGKRTLIELVAPDRAGLLTTVGRVFAEFGLDLSTAKIATLGERVEDVFYVTDSRGN 856
Query: 315 PV-DPKIIDSIRRQIGH 330
+ D I ++ ++ H
Sbjct: 857 NLYDDDFIHRLKERLEH 873
>gi|89068998|ref|ZP_01156379.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
gi|89045367|gb|EAR51432.1| PII uridylyl-transferase [Oceanicola granulosus HTCC2516]
Length = 941
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 99/241 (41%), Gaps = 42/241 (17%)
Query: 33 FAPSLRSSVG-------VMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIW 83
FA LR +G + P E+ T + D PG+FS +C LA + N+ +A +
Sbjct: 726 FARLLRGGIGHDEVRFEITPDEDRDATRVCIVMEDHPGIFSRMCGALALVQANIKDARTF 785
Query: 84 THNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 143
T D A G+ + RL +++++ L+G ++A
Sbjct: 786 TSKDGYACAAFWVQDQDGHPY-ETDRLPRLRDMIGKTLKGEVVAKEA------------- 831
Query: 144 RRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD----YTVITMRSKDRPKLLF 199
F DRD + +A +V T + + D YT+I + ++DRP LL+
Sbjct: 832 -------FRDRDKLKKREAAFKVP--------TSITFDNDGSEIYTIIEVDTRDRPGLLY 876
Query: 200 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259
D+ TL + ++ T + FY++ + GL SE+ R + L AI + A
Sbjct: 877 DLTRTLAAANVYIASAVIATYGEQVVDTFYVKDMFGLKFRSESRRRALEAKLRDAIRQGA 936
Query: 260 S 260
Sbjct: 937 Q 937
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 9/71 (12%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG---------NP 315
+E+ T DR GLL D+TR ++ I A I+T G +V DTFYV D+ G
Sbjct: 864 IEVDTRDRPGLLYDLTRTLAAANVYIASAVIATYGEQVVDTFYVKDMFGLKFRSESRRRA 923
Query: 316 VDPKIIDSIRR 326
++ K+ D+IR+
Sbjct: 924 LEAKLRDAIRQ 934
>gi|83952474|ref|ZP_00961205.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
gi|83836147|gb|EAP75445.1| protein-P-II uridylyltransferase [Roseovarius nubinhibens ISM]
Length = 923
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 91/214 (42%), Gaps = 35/214 (16%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+FS + LA + NVV+A +T D A + G+ + RL +
Sbjct: 738 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDADGHPF-EADRLPRL 796
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
++++ LRG R+A S I RER I FD+ E
Sbjct: 797 RQMIDKTLRGEVIPREAIKSRDK--IKKRERAFRVPTHITFDNDGSE------------- 841
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 842 ------------IYTIIEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYV 889
Query: 231 RHVDGLPISSEAER----ERVIQCLEAAIERRAS 260
+ + GL SEA++ ++ + + A +ER S
Sbjct: 890 KDMFGLKFHSEAKQRSLDRKLREAISAGVERAES 923
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR ++ I A I+T G +V DTFYV D+ G
Sbjct: 846 IEVDTRDRPGLLYDLTRTLAALNVYINSAVIATYGEQVVDTFYVKDMFG 894
>gi|119386663|ref|YP_917718.1| PII uridylyl-transferase [Paracoccus denitrificans PD1222]
gi|119377258|gb|ABL72022.1| metal dependent phosphohydrolase [Paracoccus denitrificans PD1222]
Length = 936
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 90/213 (42%), Gaps = 31/213 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T F D PG+FS + LA + N+V+A +T D A V + G+ R
Sbjct: 738 TRAAFVLADHPGIFSRMAGALALVGANIVDARTYTTKDGFATAVFWLQDADGHPYA-ADR 796
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L ++ ++ L+G I+ RE RD + +A R
Sbjct: 797 LPRLRTMIQRTLKGE--------------IVARE------ALAGRDKPKKREAAFRFPT- 835
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
VT N D YTVI + ++DRP LL+D+ TL D + ++ T + F
Sbjct: 836 ----HVTFDNEASDVYTVIEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTF 891
Query: 229 YIRHVDGL----PISSEAERERVIQCLEAAIER 257
Y++ + GL P EA +R+ Q ++ +ER
Sbjct: 892 YVKDMFGLKLHQPQRREALEKRLRQAIKEGVER 924
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR +N + I A I+T G +V DTFYV D+ G
Sbjct: 850 IEVDTRDRPGLLYDLTRTLADNHIQIASAVIATFGAQVVDTFYVKDMFG 898
>gi|149915372|ref|ZP_01903899.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
gi|149810661|gb|EDM70502.1| PII uridylyl-transferase [Roseobacter sp. AzwK-3b]
Length = 922
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 35/212 (16%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+FS + LA + NVV+A +T D A + G + + +RL +
Sbjct: 737 FALADHPGIFSRLAGALALVGANVVDARTYTSKDGFATAAFWIQDAEG-SPYEAERLQRL 795
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
++++ L+G D + S + RER I FD+ E
Sbjct: 796 RDMIRKTLKG--DVVAGEAIRSRDKLKKRERAFKVPTHITFDNEGSEI------------ 841
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 842 -------------YTIIEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYV 888
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEG 262
+ + GL SEA+++ + + L AI SEG
Sbjct: 889 KDMFGLKFHSEAKQKALEKKLRTAI----SEG 916
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR ++ I A I+T G +V DTFYV D+ G
Sbjct: 845 IEVDTRDRPGLLYDLTRTLANANVYINSAVIATYGEQVVDTFYVKDMFG 893
>gi|84686319|ref|ZP_01014214.1| PII uridylyl-transferase [Maritimibacter alkaliphilus HTCC2654]
gi|84665846|gb|EAQ12321.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2654]
Length = 927
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 100/221 (45%), Gaps = 35/221 (15%)
Query: 46 TEEH----TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHST 100
T++H T F D PG+FS + LA + NVV+A +T D A AV V DH
Sbjct: 730 TQDHDRDATRAAFVLADHPGIFSRLAGALALVGANVVDARTYTTKDGWATAVFWVQDHD- 788
Query: 101 GYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD-YERV 159
G+ +D K L +++++ L G R A S RD ++
Sbjct: 789 GHPFEDIK-LKRLEDMIHKTLSGKVIARDAMKS--------------------RDKMKKR 827
Query: 160 EKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
EKA + +T N D YT+I + ++DRP LL+D+ TL D + ++
Sbjct: 828 EKAF------TVPTNITFDNDGSDIYTMIEVDTRDRPGLLYDLTRTLADNHVYIASAVIA 881
Query: 219 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259
T + FY++ + GL S+A+ + + + L AI + A
Sbjct: 882 TYGEQVVDTFYVKDMFGLKFFSDAKMKSLEKKLREAIVKGA 922
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR +N + I A I+T G +V DTFYV D+ G
Sbjct: 850 IEVDTRDRPGLLYDLTRTLADNHVYIASAVIATYGEQVVDTFYVKDMFG 898
>gi|23015392|ref|ZP_00055169.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 924
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 90/207 (43%), Gaps = 28/207 (13%)
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 111
I +TG D PGLFS++ +A N+V+A+I T + A S G A P +L+
Sbjct: 731 IVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANGMALDTFCIQDSDGGAFDSPAKLA 789
Query: 112 TIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE-RVEKAVGRVEDKS 170
+ + VL G +T L DR+ R K R
Sbjct: 790 KLSSCVEQVLSG-------RTRL------------------DRELAARKGKLPSRAHVFK 824
Query: 171 SRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 229
P+V V N+ + +TV+ + +DRP LL+DI +T++ + ++T FY
Sbjct: 825 VPPRVLVDNVPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFY 884
Query: 230 IRHVDGLPISSEAERERVIQCLEAAIE 256
++ V G + + E++ L AA+E
Sbjct: 885 VKDVFGHKVEHGRKLEQIKAALLAALE 911
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P+ HT +E G DRPGL ++ + + ++ + +A I T+ +R V +V D G+
Sbjct: 834 VPSRSHTVVEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKD-VFGHK 892
Query: 104 IKDPKRLSTIKELLFNVL 121
++ ++L IK L L
Sbjct: 893 VEHGRKLEQIKAALLAAL 910
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+E+ DR GLL DIT L I A IST G +V D FYV DV G+ V+
Sbjct: 842 VEVNGRDRPGLLYDITSAMTNVGLQISSAHISTYGERVVDVFYVKDVFGHKVE 894
>gi|399993822|ref|YP_006574062.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
gi|398658377|gb|AFO92343.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis DSM 17395 = CIP
105210]
Length = 933
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 90/212 (42%), Gaps = 35/212 (16%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+F+ + LA + NVV+A +T D S G+ + +RL +
Sbjct: 748 FCMADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQDSEGHPY-EAERLPRL 806
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
+E++ LRG + + S I RER + I FD+ E
Sbjct: 807 REMIHKTLRG--EVITGEALKSRDKIKKRERAFNVPTHITFDNDGSE------------- 851
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 852 ------------IYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 899
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEG 262
+ + GL SEA++ + LEA + +EG
Sbjct: 900 KDMFGLKYYSEAKQ----KSLEAKLRSAIAEG 927
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R ++ I A I+T G +V D FYV D+ G
Sbjct: 856 IEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFG 904
>gi|126734870|ref|ZP_01750616.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
gi|126715425|gb|EBA12290.1| protein-P-II uridylyltransferase [Roseobacter sp. CCS2]
Length = 931
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 89/216 (41%), Gaps = 37/216 (17%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PGLFS + LA + NVV+A +T ND A V + G + RL +
Sbjct: 745 FAMVDHPGLFSRMTGALALVGANVVDARTYTSNDGYATAVFWVQDNDGNPY-EAARLPRL 803
Query: 114 KELLFNVLRG---YDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVE 167
++++ LRG D K K I RER I FD+ E
Sbjct: 804 RKMIERTLRGEVVAKDALKDKDK-----IKKRERAFKVPTNISFDNDGSE---------- 848
Query: 168 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
YT+I + ++DR LL+D+ TL + + ++ T +
Sbjct: 849 ---------------IYTIIEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDT 893
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASEGL 263
FY++ + GL SEA+R + + L AI + A +
Sbjct: 894 FYVKDIVGLKYHSEAKRAGLERKLREAIAQGAERAV 929
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR N + I A I+T G +V DTFYV D+ G
Sbjct: 853 IEVDTRDRTGLLYDLTRTLANNHVYIASAVIATYGEQVVDTFYVKDIVG 901
>gi|359409332|ref|ZP_09201800.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676085|gb|EHI48438.1| (protein-PII) uridylyltransferase [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 963
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+E T + D PGLFS + +A C+++NA I T +D + D + I+D
Sbjct: 764 KESTILVVMAADHPGLFSRIVGAVAVAGCSIMNARINTRHDGT-----ILDQ---FRIQD 815
Query: 107 PKRLSTIKELLFNVLRGYDDFRKAK-TSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 165
R + I + N R AK S G ++ RRL ER + R
Sbjct: 816 KDRQAVIDPQIQN--------RIAKIIEQSLAGDISLFRRLQ---------ERSAQITKR 858
Query: 166 VEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 224
+ S P+V V N + +TVI + DRP LL+ I L + + V+T +
Sbjct: 859 QKAMSVPPRVIVSNNRSNTHTVIEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKV 918
Query: 225 YQEFYIRHVDGLPISSEAERERVIQCL 251
FY++ V GL I EA ++++ Q L
Sbjct: 919 VDVFYVKDVYGLKIEREASQKKIEQTL 945
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ DR GLL IT + L I A +ST G KV D FYV DV G
Sbjct: 881 IEVNGADRPGLLYQITYHLVQLGLQINSATVSTYGEKVVDVFYVKDVYG 929
>gi|427431046|ref|ZP_18920742.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
gi|425878223|gb|EKV26942.1| [Protein-PII] uridylyltransferase [Caenispirillum salinarum AK4]
Length = 926
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 29/213 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + D PGLFS++ ++ +V+A+I T A V + G A+ D +
Sbjct: 727 TDVTIYTADHPGLFSKITGAMSLSGVTIVDAKIMTLTTGMALDVFSVQDNDGTAVTDEDK 786
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L + ++ N L G K + + P G+ +R R V +V
Sbjct: 787 LDRLARIIENALSGKIWLEK-ELAAKPSGLPSRTR------------------VFKVP-- 825
Query: 170 SSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P+V V N K YTVI + +DRP L+D+ LT + V T F
Sbjct: 826 ---PRVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVF 882
Query: 229 YIRHVDGLPISSEAE----RERVIQCLEAAIER 257
Y++ V G+ I E + RE ++ L + R
Sbjct: 883 YVKDVFGMKIEHEGKLKQVRETLMDTLNGEVAR 915
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 67/146 (45%), Gaps = 25/146 (17%)
Query: 1 MDVFNVIDCDGKKIRDKEVID--------------YIQQRLETDASFAPSLRSSVGVMP- 45
+DVF+V D DG + D++ +D ++++ L S PS R+ V +P
Sbjct: 768 LDVFSVQDNDGTAVTDEDKLDRLARIIENALSGKIWLEKELAAKPSGLPS-RTRVFKVPP 826
Query: 46 --------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
++ +T IE G DRPG +V A L + +A++ T +R V +V D
Sbjct: 827 RVVVDNTASKTYTVIEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYVKD 886
Query: 98 HSTGYAIKDPKRLSTIKELLFNVLRG 123
G I+ +L ++E L + L G
Sbjct: 887 -VFGMKIEHEGKLKQVRETLMDTLNG 911
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+E+ DR G L D+T L I A+++T G +V D FYV DV G ++
Sbjct: 841 IEVNGRDRPGFLYDVTAALTRCGLQIHSAQVTTFGERVVDVFYVKDVFGMKIE 893
>gi|28201273|dbj|BAC56782.1| unknown protein [Oryza sativa Japonica Group]
Length = 328
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 59/124 (47%), Gaps = 25/124 (20%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQ---------------RLETD--ASFAPSLRSSVGV 43
MDVF+V D G K+ + VI YI+Q R D ++ SL+S +G+
Sbjct: 200 MDVFHVTDRLGCKLTNDSVITYIEQVGGFSWWFLDSGTSVRRSWDFLMAYMASLQS-LGM 258
Query: 44 -------MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 96
M E T++E TG DR GL SEV VLAD+ C VV WTH ++ +
Sbjct: 259 WNGPTRPMALEGLTALELTGADRTGLISEVFVVLADMDCGVVEGRTWTHRVHLGCLIFLR 318
Query: 97 DHST 100
D T
Sbjct: 319 DEET 322
>gi|307103237|gb|EFN51499.1| hypothetical protein CHLNCDRAFT_59210 [Chlorella variabilis]
Length = 997
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 5/124 (4%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSL---RSSVGVMPTEEHTSIEFTGT 57
+DVF++ + +G+K+R+ + + I+Q L L M E T E G
Sbjct: 520 VDVFHLSEPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMNRIETTVFELAGP 579
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL +EV +L CNV +A +WT+ R A V+ +T+ G + D +L +++L+
Sbjct: 580 DRPGLLAEVTHLLTHNGCNVRSAAVWTYRGRVAFVLSITE--KGLPVVDGIKLQRLRQLV 637
Query: 118 FNVL 121
++
Sbjct: 638 LGIM 641
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 251 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKD--TFYV 308
LE++I+RR +GL++ + + DR G L+ +TR+ + LS+ RA++ T TFYV
Sbjct: 828 LESSIQRRFPKGLKVHVHSLDRFGCLAALTRVLHQTGLSVTRAKVRTYATSKSSGHTFYV 887
Query: 309 TDVTGNPVDPKIIDSIRRQIG 329
D G P D +++ R+IG
Sbjct: 888 MDARGGPPDKARVEAACREIG 908
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 20/170 (11%)
Query: 173 PQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P + + N D +T +T+ S +RP L IV T++ + +++ F++
Sbjct: 467 PTIDIDNKAHDKWTTVTIDSANRPGSLIYIVQHFTELDLRITSARISSDGGWFVDVFHLS 526
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRAS--------------EGLELELCTEDRVGLLS 277
+G + + + + + Q L +++ E EL DR GLL+
Sbjct: 527 EPNGEKVRNPKKLQSIKQMLNVYMQQEEDLVLNGDETDDMNRIETTVFELAGPDRPGLLA 586
Query: 278 DITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQ 327
++T + N +++ A + T G+V +T+ G PV +D I+ Q
Sbjct: 587 EVTHLLTHNGCNVRSAAVWTYRGRVAFVLSITE-KGLPV----VDGIKLQ 631
>gi|148259925|ref|YP_001234052.1| PII uridylyl-transferase [Acidiphilium cryptum JF-5]
gi|338981069|ref|ZP_08632305.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
gi|146401606|gb|ABQ30133.1| metal dependent phosphohydrolase [Acidiphilium cryptum JF-5]
gi|338208035|gb|EGO95934.1| [Protein-PII] uridylyltransferase [Acidiphilium sp. PM]
Length = 938
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 32/223 (14%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D GLFS + LA +V+A I T D A + G +
Sbjct: 738 LPARSVTEVVVYTADHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQDAGGGS 797
Query: 104 IKDPKRLSTIKELLFNVLRG----YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 159
++ P RL+ I ++ VL G + KA S+ + R R +H
Sbjct: 798 LEAPHRLAKISAVIEQVLSGRLRLATEIEKAANSV----VGGRMRAIH------------ 841
Query: 160 EKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
P+V V N + +TVI + +DRP LL D+ +T + +
Sbjct: 842 -----------VPPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHIT 890
Query: 219 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
T A FY++ V GL + +E + ++ L A+ R E
Sbjct: 891 TYGVRAVDVFYVKDVFGLKVQNERKLAQLRSALIEALAGRPHE 933
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ DR GLL D+T L I A I+T G + D FYV DV G
Sbjct: 859 IEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFG 907
>gi|326403121|ref|YP_004283202.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
gi|325049982|dbj|BAJ80320.1| PII uridylyl-transferase [Acidiphilium multivorum AIU301]
Length = 938
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 88/223 (39%), Gaps = 32/223 (14%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D GLFS + LA +V+A I T D A + G +
Sbjct: 738 LPARSVTEVVVYTADHAGLFSRIAGALAVAGATIVDARIHTLTDGMALDTFWIQDAGGGS 797
Query: 104 IKDPKRLSTIKELLFNVLRG----YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 159
++ P RL+ I ++ VL G + KA S+ + R R +H
Sbjct: 798 LEAPHRLAKISAVIEQVLSGRLRLATEIEKAANSV----VGGRMRAIH------------ 841
Query: 160 EKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
P+V V N + +TVI + +DRP LL D+ +T + +
Sbjct: 842 -----------VPPRVVVDNSASNRHTVIEVNGRDRPGLLHDVTAAITSQGLQIASAHIT 890
Query: 219 TGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
T A FY++ V GL + +E + ++ L A+ R E
Sbjct: 891 TYGVRAVDVFYVKDVFGLKVQNERKLAQLRSALIEALAGRPHE 933
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ DR GLL D+T L I A I+T G + D FYV DV G
Sbjct: 859 IEVNGRDRPGLLHDVTAAITSQGLQIASAHITTYGVRAVDVFYVKDVFG 907
>gi|385235075|ref|YP_005796417.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
gi|343463986|gb|AEM42421.1| UTP-GlnB uridylyltransferase, GlnD [Ketogulonicigenium vulgare
WSH-001]
Length = 915
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
P + T F +D PGLFS + LA + NVV+A +T D A + G
Sbjct: 721 PDRDATRASFAMSDHPGLFSRMTGALALVGANVVDARTYTTKDGYATATFWVQDADGRPF 780
Query: 105 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 164
+ RL +++++ + G ++ RE +RD +
Sbjct: 781 -EAARLPRLRQMIDRTMNGE--------------VVPRE------AMKERD------KIK 813
Query: 165 RVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
+ E + P + + E YT+I + ++DRP LL D+V TL + ++ T
Sbjct: 814 KRERAFTVPTLITFDNEGSDIYTIIEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGE 873
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259
+A FY++ + GL +E R+++ L AI++ A
Sbjct: 874 QAVDTFYVKDMFGLKFHAEGRRQQLEAKLREAIKQGA 910
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R + +I A I+T G + DTFYV D+ G
Sbjct: 838 IEVDTRDRPGLLHDLVRTLAAQNANIASAVIATYGEQAVDTFYVKDMFG 886
>gi|330993434|ref|ZP_08317369.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
gi|329759464|gb|EGG75973.1| [Protein-PII] uridylyltransferase [Gluconacetobacter sp. SXCC-1]
Length = 911
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 96/226 (42%), Gaps = 31/226 (13%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 703 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 762
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
++P++L + L+ L G+ D + ++ G RR+ I
Sbjct: 763 FEEPQQLGRLSLLIEQALTGHIDINR---EIAQCGRRLSGRRMRAIHVP----------- 808
Query: 164 GRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V + N + TV+ + +DRP LL DI L++ + + + T
Sbjct: 809 ---------PRVVIDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGV 859
Query: 223 EAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASE 261
A FY++ + GL I+ +R+ +Q EAA +RR+SE
Sbjct: 860 RAVDVFYVKDLFGLKITDRERLDRIRTTLLAGLQEAEAAAQRRSSE 905
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 255 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ RAS + E+ DR GLL DIT E L I A I+T G + D FYV D+ G
Sbjct: 813 IDNRASNTCTVVEINGRDRPGLLHDITAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 872
Query: 314 NPV-DPKIIDSIR 325
+ D + +D IR
Sbjct: 873 LKITDRERLDRIR 885
>gi|90022247|ref|YP_528074.1| PII uridylyl-transferase [Saccharophagus degradans 2-40]
gi|89951847|gb|ABD81862.1| protein-P-II uridylyltransferase [Saccharophagus degradans 2-40]
Length = 900
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ + DR GLL+ I R+F + + ++ A+IST+G +V+D F+++D+ GNP+ DP +
Sbjct: 822 LEVISPDRPGLLATIGRVFMDMDIQLQNAKISTLGERVEDIFFISDIEGNPLSDPNLCAE 881
Query: 324 IRRQI 328
++++I
Sbjct: 882 LQKEI 886
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 78/201 (38%), Gaps = 35/201 (17%)
Query: 48 EHTSIEFTGT--------DRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDH 98
E TS EF G D P +F+ V LA + N+ +A +++ N A +V D
Sbjct: 700 ETTSHEFEGATQIFVRVKDAPHVFTAVANALAQQNLNIQDARVYSAANGYTADTFYVLDD 759
Query: 99 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 158
+ DP R I+E + LR +R + +P R+L Q R Y
Sbjct: 760 NFQPIGDDPARSEKIRESVLEELRLVSGYRDVVSRRTP-------RQLKQFAVPTRTYIS 812
Query: 159 VEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN 218
+ G +TV+ + S DRP LL I DM + + ++
Sbjct: 813 NDIVSG-------------------HTVLEVISPDRPGLLATIGRVFMDMDIQLQNAKIS 853
Query: 219 TGRTEAYQEFYIRHVDGLPIS 239
T F+I ++G P+S
Sbjct: 854 TLGERVEDIFFISDIEGNPLS 874
>gi|110636357|ref|YP_676565.1| PII uridylyl-transferase [Chelativorans sp. BNC1]
gi|110287341|gb|ABG65400.1| UTP-GlnB uridylyltransferase, GlnD [Chelativorans sp. BNC1]
Length = 912
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLLS++T + + SL I A I+T G KV DTFYVTD+TG+ VD P ++
Sbjct: 826 IEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTDLTGSKVDNPDRLEV 885
Query: 324 IRRQI 328
IRR++
Sbjct: 886 IRREL 890
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 111
IE DRPGL SEV +VL+DL ++ +A I T ++ +VTD TG + +P RL
Sbjct: 826 IEIECLDRPGLLSEVTSVLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGSKVDNPDRLE 884
Query: 112 TIKELLFNVL 121
I+ L +
Sbjct: 885 VIRRELIETI 894
>gi|395785698|ref|ZP_10465426.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|423717410|ref|ZP_17691600.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
gi|395424156|gb|EJF90343.1| protein-P-II uridylyltransferase [Bartonella tamiae Th239]
gi|395427625|gb|EJF93716.1| protein-P-II uridylyltransferase [Bartonella tamiae Th307]
Length = 927
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 101/229 (44%), Gaps = 30/229 (13%)
Query: 38 RSSVGVMPT----EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 93
++S+ +M T E+ T I D P L S + A N+V+A+I+T +D A +
Sbjct: 719 KTSLSIMMTPRASEDVTEITLLAPDHPRLLSIITGACAAAGANIVDAQIFTTSDGRALDI 778
Query: 94 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 153
+ + + + KR +KE++ L+G +PP R R++ +
Sbjct: 779 ILIKRAFDFDEDETKRARRVKEIIEQALKGTIRLPDEIARHAPP---KRTRKIFDVT--- 832
Query: 154 RDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 212
P V + N + + ++VI ++S DRP LL D+ TL+D+ +
Sbjct: 833 -------------------PTVEINNDLSETFSVIEVKSMDRPGLLSDLTKTLSDLSLDI 873
Query: 213 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
+ T +A FY+R + G +++ + R+ L + ++ + ++
Sbjct: 874 ASAHITTFGEKAIDSFYVRDLIGHKLTNPQRQTRICHKLLSIVQTQTAD 922
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ + DR GLLSD+T+ + SL I A I+T G K D+FYV D+ G+ +
Sbjct: 848 IEVKSMDRPGLLSDLTKTLSDLSLDIASAHITTFGEKAIDSFYVRDLIGHKL 899
>gi|400755337|ref|YP_006563705.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
gi|398654490|gb|AFO88460.1| uridylyltransferase GlnD [Phaeobacter gallaeciensis 2.10]
Length = 933
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 90/212 (42%), Gaps = 35/212 (16%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+F+ + LA + NVV+A +T D S G+ + +RL +
Sbjct: 748 FCMADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQDSEGHPY-EAERLPRL 806
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
+E++ L+G + + S I RER + I FD+ E
Sbjct: 807 REMIHKTLKG--EVITGEALKSRDKIKKRERAFNVPTHITFDNDGSE------------- 851
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 852 ------------IYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 899
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEG 262
+ + GL SEA++ + LEA + +EG
Sbjct: 900 KDMFGLKYYSEAKQ----KSLEAKLRSAIAEG 927
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R ++ I A I+T G +V D FYV D+ G
Sbjct: 856 IEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFG 904
>gi|385808872|ref|YP_005845268.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
gi|383800920|gb|AFH48000.1| PII family uridylyltransferase [Ignavibacterium album JCM 16511]
Length = 856
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 27/213 (12%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYAIK 105
+++T+I D P L S++C VLA N+ +A+I+T D +VTD T I
Sbjct: 667 DDYTNITIITKDFPALLSKLCGVLAINDANIHDAKIFTRKDGIVIDTFNVTDFRTHKKI- 725
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 165
DP + I+ L L GY + K + L +R +RL Q +F
Sbjct: 726 DPSKYQKIENDLTKALTGYLEVNKEVSMLK-----SRWKRLEQKLF-------------- 766
Query: 166 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
+S + +V+ N E+ YT+I + S DR L+ I ++++ V+ ++T +
Sbjct: 767 --KRSGQVKVSFDNHER-YTIIDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDDIV 823
Query: 226 QEFYIRHVDGLPISSEAE---RERVIQCLEAAI 255
FY+ + G IS + +E +I +E +
Sbjct: 824 DSFYVLNQSGKKISPSDQAFIKEELINTIEQIL 856
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+++ + DR+G L ITR E L I A+IST G + D+FYV + +G + P I
Sbjct: 785 IDVFSPDRLGFLYHITRKMSELGLVIHFAKISTKGDDIVDSFYVLNQSGKKISPSDQAFI 844
Query: 325 RRQIGHTKLQV 335
+ ++ +T Q+
Sbjct: 845 KEELINTIEQI 855
>gi|241865260|gb|ACS68708.1| amino acid binding protein [Sonneratia alba]
gi|241865493|gb|ACS68779.1| amino acid binding protein [Sonneratia alba]
Length = 129
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 3 VFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLR----SSVGVMPTEEHTSIEFTGTD 58
VF+ D G KI D++ IDYI++ L + ++ VG+ ++T+IE TG D
Sbjct: 55 VFHATDQQGNKITDRKTIDYIEKVLGPNGHLTDRIKMWPGKRVGIHSIGDYTAIELTGKD 114
Query: 59 RPGLFSEVCAVLADL 73
RPGL SE+ AVLA L
Sbjct: 115 RPGLLSEISAVLAGL 129
>gi|349686456|ref|ZP_08897598.1| PII uridylyl-transferase [Gluconacetobacter oboediens 174Bp2]
Length = 954
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 100/231 (43%), Gaps = 41/231 (17%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 746 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 805
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
++P++L+ + L+ L G+ + +NRE + +
Sbjct: 806 FEEPQQLARLSLLVEQALTGHLN-------------INRE---------------IAQCG 837
Query: 164 GRVEDKSSR-----PQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 217
RV + R P+V + N + TV+ + +DRP LL D+ L++ + + +
Sbjct: 838 RRVSGRRMRAIHVPPRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHI 897
Query: 218 NTGRTEAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASE 261
T A FY++ + GL I+ + +R+ +Q EAA +RR+SE
Sbjct: 898 TTYGVRAVDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRRSSE 948
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 255 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ RAS + E+ DR GLL D+T E L I A I+T G + D FYV D+ G
Sbjct: 856 IDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 915
Query: 314 NPV-DPKIIDSIR 325
+ D +D IR
Sbjct: 916 LKITDKGRLDRIR 928
>gi|254436503|ref|ZP_05049997.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
gi|198251949|gb|EDY76263.1| protein-P-II uridylyltransferase [Octadecabacter antarcticus 307]
Length = 937
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 39/234 (16%)
Query: 33 FAPSLRS------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 84
FA LR + + P E+ T + F D PG+FS +C L+ + NVV+A +T
Sbjct: 723 FAQMLRGLGNDEVRINLTPDEDRDATRVCFAMADHPGIFSRMCGALSLVGANVVDARTFT 782
Query: 85 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 144
D A S G +D RL ++E++ L+G R A + RE+
Sbjct: 783 SKDGFATAAFWVQDSEGTPYEDI-RLPRLREVIERTLKGEVVARDALAGKDK--VKKREK 839
Query: 145 RLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDI 201
I FD+ E YT+I + ++DRP LL D+
Sbjct: 840 AFRVKTSITFDNEGSE-------------------------IYTIIEVDTRDRPGLLHDL 874
Query: 202 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
TL + + ++ T + FY++ + GL ++ +R+ + L AI
Sbjct: 875 TRTLANNNVYIASAVIATYGEQVVDTFYVKDMFGLKYHAQGKRDALENKLHEAI 928
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR N++ I A I+T G +V DTFYV D+ G
Sbjct: 860 IEVDTRDRPGLLHDLTRTLANNNVYIASAVIATYGEQVVDTFYVKDMFG 908
>gi|83313575|ref|YP_423839.1| PII uridylyl-transferase [Magnetospirillum magneticum AMB-1]
gi|82948416|dbj|BAE53280.1| UTP:GlnB (protein PII) uridylyltransferase [Magnetospirillum
magneticum AMB-1]
Length = 929
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 104/236 (44%), Gaps = 33/236 (13%)
Query: 34 APSLRSSVGVMP-TEEHTS----IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 88
A ++R+ + V P + H + I +TG D PGLFS++ +A N+V+A+I T +
Sbjct: 708 AEAVRAPLTVEPRVDSHRAVTEIIVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANG 766
Query: 89 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 148
A S G A P +L+ + + VL G +T L
Sbjct: 767 MALDTFCIQDSDGGAFDSPAKLAKLATCVEQVLSG-------RTRL-------------- 805
Query: 149 IMFDDRDYE-RVEKAVGRVEDKSSRPQVTVLNI-EKDYTVITMRSKDRPKLLFDIVCTLT 206
DR+ R K R P+V V N+ + +TV+ + +DRP LL+DI +T
Sbjct: 806 ----DRELAARKGKLPSRAHVFKVPPRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMT 861
Query: 207 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEG 262
++ + ++T FY++ V G I + +++ L AA+E A++
Sbjct: 862 NVGLQISSAHISTYGERVVDVFYVKDVFGHKIEHGRKLDQIKAALLAALEDPAAKA 917
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 70/188 (37%), Gaps = 37/188 (19%)
Query: 167 EDKSSRPQVTV---LNIEKDYTVITMRSKDRPKLLFDIVCTLT-DMQYVVFHGMVNTGRT 222
E ++ R +TV ++ + T I + + D P L I + +V ++
Sbjct: 707 EAEAVRAPLTVEPRVDSHRAVTEIIVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANG 766
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL----------------- 265
A F I+ DG S A+ ++ C+E + R EL
Sbjct: 767 MALDTFCIQDSDGGAFDSPAKLAKLATCVEQVLSGRTRLDRELAARKGKLPSRAHVFKVP 826
Query: 266 ----------------ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
E+ DR GLL DIT L I A IST G +V D FYV
Sbjct: 827 PRVLVDNMPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVK 886
Query: 310 DVTGNPVD 317
DV G+ ++
Sbjct: 887 DVFGHKIE 894
>gi|260425574|ref|ZP_05779554.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
gi|260423514|gb|EEX16764.1| protein-P-II uridylyltransferase [Citreicella sp. SE45]
Length = 915
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 97/221 (43%), Gaps = 33/221 (14%)
Query: 41 VGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
+ + P E+ T + F +D PG+FS + L+ + NVV+A +T D A
Sbjct: 714 IDIHPDEDRDATRVCFALSDHPGIFSRLAGALSLVGANVVDARTFTSKDGYATAAFWIQD 773
Query: 99 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRL---HQIMFDDRD 155
+ G + + RL +++++ L G + + + LS I RER I FD+
Sbjct: 774 ADG-SPYEQNRLGRLRDMIRKTLMG--EVKPREAILSKGKIKKRERAFTVPTSITFDNEG 830
Query: 156 YERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 215
E YT+I + ++DRP LL+D+ TL + +
Sbjct: 831 SE-------------------------IYTIIEVDTRDRPGLLYDLTRTLAETNVYIASA 865
Query: 216 MVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 256
++ T + FY++ + GL + ++++ + + L AA+E
Sbjct: 866 VIATYGEQVVDTFYVKDMFGLKFYTPSKQKTLEKRLRAAME 906
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR E ++ I A I+T G +V DTFYV D+ G
Sbjct: 837 IEVDTRDRPGLLYDLTRTLAETNVYIASAVIATYGEQVVDTFYVKDMFG 885
>gi|346994787|ref|ZP_08862859.1| PII uridylyl-transferase [Ruegeria sp. TW15]
Length = 939
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+FS + LA + NVV+A +T D + G+ + RL +
Sbjct: 754 FAMGDHPGIFSRIAGALALVGANVVDARSYTTKDGYVTDAFWIQDAEGHPF-EASRLPRL 812
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
+++ L+G R A S I RER + + FD+ E
Sbjct: 813 TQMIHKTLKGEVVARDALKSRDK--IKKRERAFNVPTHVTFDNEGSE------------- 857
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 858 ------------IYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYV 905
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
+ + GL SEA++ + LEA + + EG E
Sbjct: 906 KDMFGLKYHSEAKQ----RGLEAKLRKAIVEGAE 935
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R ++ I A I+T G +V DTFYV D+ G
Sbjct: 862 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFG 910
>gi|357503663|ref|XP_003622120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497135|gb|AES78338.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 31/39 (79%)
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
+PGL E+ A L +LHCNVV AE+WTHND+A VVHVT+
Sbjct: 854 KPGLRYEIPAFLTELHCNVVAAEMWTHNDKAETVVHVTN 892
>gi|162147864|ref|YP_001602325.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542483|ref|YP_002274712.1| PII uridylyl-transferase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786441|emb|CAP56023.1| putative uridylyltransferase (PII uridylyl transferase)
(Uridylyl-removing enzyme) (UTase) [Gluconacetobacter
diazotrophicus PAl 5]
gi|209530160|gb|ACI50097.1| UTP-GlnB uridylyltransferase, GlnD [Gluconacetobacter
diazotrophicus PAl 5]
Length = 989
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 28/223 (12%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS + LA ++V+A I T + A + G A
Sbjct: 780 LPARGVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAGGEA 839
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
++P +L+ + L+ L G D K S R R +H
Sbjct: 840 FEEPHQLARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH---------------- 883
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V + N YTVI + +DRP LL D+ ++D + + + T
Sbjct: 884 -------VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGV 936
Query: 223 EAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASE 261
A FY++ + GL I+ E RE ++ L A E SE
Sbjct: 937 RAVDVFYVKDLFGLKITDERRLGEIREALLHGLRQAEEAMTSE 979
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 255 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ RAS +E+ DR GLL D+T+ ++ L I A I+T G + D FYV D+ G
Sbjct: 890 IDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLFG 949
Query: 314 NPV-DPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET 349
+ D + + IR + H Q + + PP E+
Sbjct: 950 LKITDERRLGEIREALLHGLRQAEEAMTSEIGPPAES 986
>gi|159045373|ref|YP_001534167.1| PII uridylyl-transferase [Dinoroseobacter shibae DFL 12]
gi|157913133|gb|ABV94566.1| [Protein-PII] uridylyltransferase [Dinoroseobacter shibae DFL 12]
Length = 943
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 31/213 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + F D PG+F+ + LA + NVV+A +T D + G D R
Sbjct: 754 TRVSFAMADHPGIFARLAGALALVGANVVDARTYTTKDGYVTACFWVQDADGKPY-DESR 812
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRV 166
L +++++ L G + ++ +S + R+ + I FD+ E
Sbjct: 813 LPRLRKMIDKTLSG--EVVTSQALVSKDKVKKRDAQFRFPTSISFDNEGSE--------- 861
Query: 167 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
YT+I + ++DRP LLFD+ L D V + T +
Sbjct: 862 ----------------IYTLIEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVD 905
Query: 227 EFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259
FY++ + GL + EA++ + + L A+E A
Sbjct: 906 TFYVKDMFGLKLHGEAKQRTIEKRLREAVEHGA 938
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ + + ++ + A+I+T G +V DTFYV D+ G
Sbjct: 866 IEVDTRDRPGLLFDLAKALADANIYVASAQIATYGAQVVDTFYVKDMFG 914
>gi|399519985|ref|ZP_10760776.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
gi|399112382|emb|CCH37335.1| protein-P-II uridylyltransferase [Pseudomonas pseudoalcaligenes
CECT 5344]
Length = 897
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I RIF E LS++ A+I+T+G +V+D F++TD G P+ DP++
Sbjct: 817 LELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITDDKGQPLSDPELCAR 876
Query: 322 --DSIRRQIGHTKLQVKRSTI 340
++I R++ +Q + +I
Sbjct: 877 LQETIVRRLSEPSIQPAQFSI 897
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 85/219 (38%), Gaps = 37/219 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-K 105
E T I D+ F+ A ++ L+ N+ +A I T + +V + G +I
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGN 761
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P R+ I+E L L+ DD+ P I+ R R+L F
Sbjct: 762 NPARIQQIREGLIEALKNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ T++ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
F+I G P+S R L+ I RR SE
Sbjct: 853 RVEDVFFITDDKGQPLSDPELCAR----LQETIVRRLSE 887
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 25/137 (18%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG ++IR+ K DY IQ+R+ +FAP +
Sbjct: 746 LDTYVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ T +E T DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKE 115
G + DP+ + ++E
Sbjct: 863 DKGQPLSDPELCARLQE 879
>gi|337264724|ref|YP_004608779.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
gi|336025034|gb|AEH84685.1| UTP-GlnB uridylyltransferase, GlnD [Mesorhizobium opportunistum
WSM2075]
Length = 933
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQI 328
DR GLLS+ITR + SL I A I+T G KV DTFYVTD+TG +D P I +IR ++
Sbjct: 855 DRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRL 913
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 111
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPARIA 907
Query: 112 TIKELLFNVLRG 123
TI+ L L G
Sbjct: 908 TIRNRLIATLEG 919
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 84/218 (38%), Gaps = 28/218 (12%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D P L S + A N+V+A+I+T +D A + +
Sbjct: 733 EAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSDGRALDTILISREFDRDEDE 792
Query: 107 PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 166
+R + L+ +VL G S P I R + R +V K R
Sbjct: 793 RRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--------PRRGSKVFKIPPRA 836
Query: 167 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
E +++ + ++VI + DRP LL +I TL+D+ + + T +
Sbjct: 837 EIRNA--------LSNRFSVIEVEGLDRPGLLSEITRTLSDLSLDIASAHITTFGEKVID 888
Query: 227 EFYIRHVDGLPISSEAE----RERVIQCLEAAIERRAS 260
FY+ + G I S A R R+I LE A R
Sbjct: 889 TFYVTDLTGQKIDSPARIATIRNRLIATLEGAAPERGG 926
>gi|452964180|gb|EME69226.1| PII uridylyl-transferase [Magnetospirillum sp. SO-1]
Length = 926
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 99/233 (42%), Gaps = 31/233 (13%)
Query: 34 APSLRSSVGVMP-TEEHTSIE----FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 88
A ++R+ + V P + H ++ +TG D PGLFS++ +A N+V+A+I T +
Sbjct: 709 AEAVRAPLTVEPRVDSHRAVTEIVVYTG-DHPGLFSQIAGAMAVSGANIVDAKIITLANG 767
Query: 89 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 148
A S G A P +L+ + + VL G R R
Sbjct: 768 MALDTFCIQDSDGGAFDSPAKLAKLSACVEQVLSG------------------RAR---- 805
Query: 149 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 207
D R K R P+V V N + +TV+ + +DRP LL+DI +T+
Sbjct: 806 --LDRELAARKGKLPSRAHVFKVPPRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTN 863
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 260
+ + ++T FY++ V G I + E++ L AA+E A+
Sbjct: 864 VGLQISSAHISTYGERVVDVFYVKDVFGHKIEHGRKLEQIKAALLAALEDPAA 916
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 71/188 (37%), Gaps = 37/188 (19%)
Query: 167 EDKSSRPQVTV---LNIEKDYTVITMRSKDRPKLLFDIVCTLT-DMQYVVFHGMVNTGRT 222
E ++ R +TV ++ + T I + + D P L I + +V ++
Sbjct: 708 EAEAVRAPLTVEPRVDSHRAVTEIVVYTGDHPGLFSQIAGAMAVSGANIVDAKIITLANG 767
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL----------------- 265
A F I+ DG S A+ ++ C+E + RA EL
Sbjct: 768 MALDTFCIQDSDGGAFDSPAKLAKLSACVEQVLSGRARLDRELAARKGKLPSRAHVFKVP 827
Query: 266 ----------------ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
E+ DR GLL DIT L I A IST G +V D FYV
Sbjct: 828 PRVLVDNKPSRSHTVVEVNGRDRPGLLYDITNAMTNVGLQISSAHISTYGERVVDVFYVK 887
Query: 310 DVTGNPVD 317
DV G+ ++
Sbjct: 888 DVFGHKIE 895
>gi|17226253|gb|AAL37712.1|AF397025_2 uridylyltransferase [Gluconacetobacter diazotrophicus PAl 5]
Length = 990
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 88/223 (39%), Gaps = 28/223 (12%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS + LA ++V+A I T + A + G A
Sbjct: 781 LPARGVTEVTIYTADHPGLFSRMAGALAIAGASIVDARIHTLINGMALDTFWIQDAGGEA 840
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
++P +L+ + L+ L G D K S R R +H
Sbjct: 841 FEEPHQLARLSALVEQALSGRVDIPKEIVSAGRMRYGRRMRAIH---------------- 884
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V + N YTVI + +DRP LL D+ ++D + + + T
Sbjct: 885 -------VPPRVVIDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGV 937
Query: 223 EAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASE 261
A FY++ + GL I+ E RE ++ L A E SE
Sbjct: 938 RAVDVFYVKDLFGLKITDERRLGEIREALLHGLRQAEEAMTSE 980
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 255 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ RAS +E+ DR GLL D+T+ ++ L I A I+T G + D FYV D+ G
Sbjct: 891 IDNRASNTYTVIEINGRDRPGLLHDVTQAISDHKLQIASAHITTYGVRAVDVFYVKDLFG 950
Query: 314 NPV-DPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET 349
+ D + + IR + H Q + + PP E+
Sbjct: 951 LKITDERRLGEIREALLHGLRQAEEAMTSEIGPPAES 987
>gi|347761851|ref|YP_004869412.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
gi|347580821|dbj|BAK85042.1| uridylyltransferase PII [Gluconacetobacter xylinus NBRC 3288]
Length = 965
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 31/226 (13%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 757 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 816
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
++P++L + L+ L G+ + + ++ G RR+ I
Sbjct: 817 FEEPQQLGRLSLLIEQALTGHLNINR---EIAQCGRRLSGRRMRAIHVP----------- 862
Query: 164 GRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V + N + TV+ + +DRP LL D+ L++ + + + T
Sbjct: 863 ---------PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 913
Query: 223 EAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASE 261
A FY++ + GL I+ + +RV +Q EAA +RR+SE
Sbjct: 914 RAVDVFYVKDLFGLKITDKERLDRVRTTLLAGLQEAEAAAQRRSSE 959
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 255 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ RAS + E+ DR GLL D+T E L I A I+T G + D FYV D+ G
Sbjct: 867 IDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 926
Query: 314 NPV-DPKIIDSIR 325
+ D + +D +R
Sbjct: 927 LKITDKERLDRVR 939
>gi|144900389|emb|CAM77253.1| Protein-P-II uridylyltransferase [Magnetospirillum gryphiswaldense
MSR-1]
Length = 920
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I +D PGLFS++ +A N+V+A+I T + A S G A P +
Sbjct: 726 TEINVYTSDHPGLFSQIAGAMAVSGANIVDAKIVTLANGMALDSFWIQESDGAAFDTPSK 785
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L+ + ++ VL G ++ D R K R
Sbjct: 786 LAKLSTVIEQVLSG------------------------RMRLDKELAARKGKLPARAHVF 821
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P+V + N +T+I + +DRP LL+D+ +T + + ++T F
Sbjct: 822 KVPPRVIIDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVF 881
Query: 229 YIRHVDGLPISSEAERERV 247
Y++ + GL + E + E++
Sbjct: 882 YVKDIFGLKVQHERKLEQI 900
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ HT IE G DRPGL ++ A + L + +A I T+ +R V +V D G ++
Sbjct: 834 SSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYVKD-IFGLKVQ 892
Query: 106 DPKRLSTIKELLFNVLR 122
++L I++ + LR
Sbjct: 893 HERKLEQIRDGVLKALR 909
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 255 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ +AS L E+ DR GLL D+T + L I A IST G +V D FYV D+ G
Sbjct: 829 IDNKASSSHTLIEVNGRDRPGLLYDLTAAMTQLGLQIASAHISTYGERVVDVFYVKDIFG 888
Query: 314 NPV 316
V
Sbjct: 889 LKV 891
>gi|146308076|ref|YP_001188541.1| PII uridylyl-transferase [Pseudomonas mendocina ymp]
gi|421503969|ref|ZP_15950913.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
gi|166990445|sp|A4XWU3.1|GLND_PSEMY RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145576277|gb|ABP85809.1| metal dependent phosphohydrolase [Pseudomonas mendocina ymp]
gi|400345070|gb|EJO93436.1| PII uridylyl-transferase [Pseudomonas mendocina DLHK]
Length = 899
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I RIF E LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTDANNQPLSDPELCAR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQETI 881
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 85/219 (38%), Gaps = 37/219 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A ++ L+ N+ +A I T + +V + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L L+ D++ P I+ R R+L F
Sbjct: 762 NPARIKQIREGLIEALKNPDEY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ T++ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
F++ + P+S R L+ I RR SE
Sbjct: 853 RVEDVFFVTDANNQPLSDPELCAR----LQETIVRRLSE 887
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 25/137 (18%)
Query: 1 MDVFNVIDCDGKKIRDK-------------------EVIDYIQQRLETDA---SFAPSLR 38
+D + V+D DG I D E IQ+R+ +FAP +
Sbjct: 746 LDTYVVLDADGGSIGDNPARIKQIREGLIEALKNPDEYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ T +E T DRPGL + + + + ++ NA+I T +R V VTD
Sbjct: 805 -TIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFVTD- 862
Query: 99 STGYAIKDPKRLSTIKE 115
+ + DP+ + ++E
Sbjct: 863 ANNQPLSDPELCARLQE 879
>gi|189218779|ref|YP_001939420.1| UTP:GlnB (protein PII) uridylyltransferase [Methylacidiphilum
infernorum V4]
gi|189185637|gb|ACD82822.1| UTP:GlnB (protein PII) uridylyltransferase [Methylacidiphilum
infernorum V4]
Length = 908
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 94/213 (44%), Gaps = 27/213 (12%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYA 103
P +H+ + DR G+FS +C A + ++++A+I T D V V YA
Sbjct: 719 PEFDHSEVIIVTWDRLGVFSRICGSFAVVGLSILSADIHTRTDGIVLDVFKVCTSRKEYA 778
Query: 104 IKDPKRLSTIKELLFNVL-RGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 162
++ + S K L L YD F + + PGIM + +++E
Sbjct: 779 CREQYKDSFCKVLEEAFLDESYDIFSR----IPKPGIMEK-----------KEFEGEFPT 823
Query: 163 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
+ + +SS K+YT++ +++ D+P LL+ I L D+ + + T +
Sbjct: 824 SIQFDQQSS----------KNYTILDIQTPDKPALLYRIANALLDLGIEIVSARIATEKG 873
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
A FYI + G ++ E E + +++ L AI
Sbjct: 874 AALDTFYILNSSGNKVTKETEIKEILKNLRKAI 906
>gi|443469603|ref|ZP_21059757.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
gi|442899055|gb|ELS25586.1| Protein-PII uridylyltransferase [Pseudomonas pseudoalcaligenes
KF707]
Length = 900
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 5/80 (6%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I RIF E LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFVTDANNQPLSDPELCRR 876
Query: 322 --DSIRRQIGHTKLQVKRST 339
D+I Q+ Q + T
Sbjct: 877 LQDAIVSQLSQANGQGQSPT 896
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A ++ L+ N+ +A I T + ++ + G I D
Sbjct: 702 EGATQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYIVLDADGGRIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L + L+ DD+ P I+ R R+L F
Sbjct: 762 NPARIREIREGLIDALKNPDDY---------PAIIQRRVPRQLKHFAFP----------- 801
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 802 ---------PQVTISNDAQRPVTVLELIAPDRPGLLARIGRIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F++ + P+S
Sbjct: 853 RVEDVFFVTDANNQPLS 869
>gi|359780511|ref|ZP_09283737.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
gi|359371823|gb|EHK72388.1| PII uridylyl-transferase [Pseudomonas psychrotolerans L19]
Length = 899
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+EL DR GLL+ + RIF + LS+ A+I+T+G +V+D FYVTD G P+ DP + +
Sbjct: 817 IELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVEDVFYVTDADGRPLADPGLCSA 876
Query: 324 IR----RQIGHTKLQVKRSTI 340
++ +Q+G Q S I
Sbjct: 877 LQHALIKQLGEPDSQTPLSRI 897
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F+P + M + + IE T DRPGL + V + D +V+NA+I T +R
Sbjct: 799 AFSPQVNIYTDTMRSA--SLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLGERVED 856
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
V +VTD + G + DP S ++ L L
Sbjct: 857 VFYVTD-ADGRPLADPGLCSALQHALIKQL 885
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 78/198 (39%), Gaps = 33/198 (16%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI- 104
+E T I D+ F+ AV+ L+ N+ +A I T + ++ + G +I
Sbjct: 701 SEGGTQIFIYAADQHDFFAVTVAVMDQLNLNIQDARIITSTSQFTLDTYIVLDTDGGSIG 760
Query: 105 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKA 162
+P R++ I+ L L+ +++ P I+NR R+L F
Sbjct: 761 NNPARIAQIRGGLIEALKHPEEY---------PSIINRRVTRQLKHFAFS---------- 801
Query: 163 VGRVEDKSSRPQVTVL-NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 221
PQV + + + ++I + + DRP LL + D V + + T
Sbjct: 802 ----------PQVNIYTDTMRSASLIELTAPDRPGLLARVGRIFLDFDLSVLNAKIATLG 851
Query: 222 TEAYQEFYIRHVDGLPIS 239
FY+ DG P++
Sbjct: 852 ERVEDVFYVTDADGRPLA 869
>gi|254282307|ref|ZP_04957275.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
gi|219678510|gb|EED34859.1| protein-pII uridylyltransferase [gamma proteobacterium NOR51-B]
Length = 440
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 30/162 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA-YQEFYIRHVDGLPISS-EA 242
T I + ++D+P+LL I L + + + TG A FY+ + DG PI+S EA
Sbjct: 255 TQIFVHAQDKPELLVRICIELELLHLSIHDARIYTGTDGATLNTFYVLNSDGSPIASDEA 314
Query: 243 ERERVIQCLEAAIE--------RRASEGLE--------------------LELCTEDRVG 274
+ + +E + RR L+ LE+ T DR G
Sbjct: 315 NLDYIRSSIETGLASNKSRSSTRRTPRQLKSFVMPTETHIRQDLDRGWTILEVATPDRPG 374
Query: 275 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
LL+ + +F ++ ++++ A+I T+G +V+D F+VTD+ G +
Sbjct: 375 LLARLGALFIDHGVALQSAKIQTLGERVEDVFFVTDMQGRAL 416
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 1 MDVFNVIDCDGKKIRDKEV-IDYIQQRLETDASFAPSLRSSVG---------VMPTEEH- 49
++ F V++ DG I E +DYI+ +ET + S RSS VMPTE H
Sbjct: 296 LNTFYVLNSDGSPIASDEANLDYIRSSIETGLASNKS-RSSTRRTPRQLKSFVMPTETHI 354
Query: 50 --------TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
T +E DRPGL + + A+ D + +A+I T +R V VTD G
Sbjct: 355 RQDLDRGWTILEVATPDRPGLLARLGALFIDHGVALQSAKIQTLGERVEDVFFVTDMQ-G 413
Query: 102 YAIKDPKRLSTIKELLFNVLRG 123
A+ + L ++ + L G
Sbjct: 414 RALTNNTTLEHLQTAIRETLDG 435
>gi|301058658|ref|ZP_07199659.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
gi|300447222|gb|EFK10986.1| protein-P-II uridylyltransferase [delta proteobacterium NaphS2]
Length = 878
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 92/209 (44%), Gaps = 31/209 (14%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHST-GYAI 104
E I F DRPG+FS + VLA NVV A I+T D + T H+ +A+
Sbjct: 691 ESCVDITFMSKDRPGIFSRMAGVLAINRINVVAANIYTWGDGTVVDIFKATPHADRHHAL 750
Query: 105 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 164
+ K++ E +V RG + +DR E+ + ++
Sbjct: 751 EVWKKVQKDAE---DVFRG------------------------NLSLEDRLKEKAKPSIL 783
Query: 165 RVEDKSSR-PQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
E K S P++ V N D+ T+I + + +R LL+DI TL ++ + + T
Sbjct: 784 DSEYKPSHAPKILVNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKAD 843
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCL 251
+ FY+R ++G + E E R+++ L
Sbjct: 844 QVADVFYVRDLEGQKVEDEKETARIVETL 872
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 6/81 (7%)
Query: 255 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+ RAS+ L E+ ++RVGLL DITR E L I+ A+I+T +V D FYV D+ G
Sbjct: 797 VNNRASDFFTLIEVFADNRVGLLYDITRTLFELGLDIRIAKIATKADQVADVFYVRDLEG 856
Query: 314 NPVD-----PKIIDSIRRQIG 329
V+ +I++++ +++G
Sbjct: 857 QKVEDEKETARIVETLNKKLG 877
>gi|330504246|ref|YP_004381115.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
gi|328918532|gb|AEB59363.1| PII uridylyl-transferase [Pseudomonas mendocina NK-01]
Length = 898
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I RIF E LS++ A+I+T+G +V+D F++TD G P+ DP+
Sbjct: 817 LELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITDDKGQPLSDPEFCAR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQEAI 881
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-K 105
E T I D+ F+ A ++ L+ N+ +A I T + +V + G +I
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSTSQFTLDTYVVLDADGGSIGN 761
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P R+ I+E L L+ DD+ P I+ R R+L F
Sbjct: 762 NPARIQQIREGLIEALKNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ T++ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I G P+S
Sbjct: 853 RVEDVFFITDDKGQPLS 869
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG ++IR+ K DY IQ+R+ +FAP +
Sbjct: 746 LDTYVVLDADGGSIGNNPARIQQIREGLIEALKNPDDYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ T +E T DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRPVTILELTAPDRPGLLARIGRIFLEYDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
G + DP+ + ++E + L
Sbjct: 863 DKGQPLSDPEFCARLQEAIIAKL 885
>gi|372271448|ref|ZP_09507496.1| PII uridylyl-transferase [Marinobacterium stanieri S30]
Length = 884
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ T DR GLL+ I RIF E +S+++A+IS+IG +V+D F++TD P+ DP++
Sbjct: 811 LEIITPDRPGLLARIGRIFVEFDISVRKAKISSIGERVEDFFFITDSQNQPISDPELCRE 870
Query: 324 IRRQI 328
+++ I
Sbjct: 871 LQQAI 875
>gi|296115100|ref|ZP_06833741.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
gi|295978201|gb|EFG84938.1| PII uridylyl-transferase [Gluconacetobacter hansenii ATCC 23769]
Length = 952
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 24/223 (10%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS + +A ++V+A I T + A + G A
Sbjct: 744 IPARGVTEVTIYAADHPGLFSRIAGAVAIAGASIVDARIHTMTNGMALDTLWVQDADGAA 803
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
++P++L+ + L+ L G + K S G R R +H
Sbjct: 804 FEEPQQLARLSMLVEQALSGQLNISKEIASCGRRGSGRRMRAIH---------------- 847
Query: 164 GRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V + N + TV+ + +DRP LL DI T++D + + + T
Sbjct: 848 -------VPPRVVIDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGV 900
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL 265
A FY++ + GL I+ +A E + Q L A +++ + L
Sbjct: 901 RAVDVFYVKDLFGLKITDKARLETIRQTLLAGLQKAEANATRL 943
Score = 44.7 bits (104), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 255 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ RAS + E+ DR GLL DIT + L I A I+T G + D FYV D+ G
Sbjct: 854 IDNRASNACTVVEINGRDRPGLLHDITATISDQKLQIASAHITTYGVRAVDVFYVKDLFG 913
Query: 314 NPVDPKIIDSIRRQIGHTKLQVKRSTILA 342
KI D R L+ R T+LA
Sbjct: 914 L----KITDKAR-------LETIRQTLLA 931
>gi|254482871|ref|ZP_05096108.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
gi|214036952|gb|EEB77622.1| protein-P-II uridylyltransferase [marine gamma proteobacterium
HTCC2148]
Length = 880
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ T DR GLL+ I RIF E + ++ A+I T+G +V+D F++TD P+ DP++ ++
Sbjct: 806 LEIATPDRPGLLARIGRIFVEYDIELQAAKIQTLGERVEDVFFITDAKQQPITDPELCEA 865
Query: 324 IRRQI 328
I++ I
Sbjct: 866 IQQAI 870
Score = 38.5 bits (88), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 21/141 (14%)
Query: 1 MDVFNVIDCDGKKI-RDKEVIDYIQQRL-----ETD--------------ASFAPSLRSS 40
+D F V+ DGK I D I++I++ L +TD SF+ ++
Sbjct: 735 LDTFFVLGSDGKSIAEDSTRINHIREHLSLTLSDTDNARDIVQRRTPRAKKSFSVPTETA 794
Query: 41 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 100
+ V + ++ +E DRPGL + + + + + A+I T +R V +TD +
Sbjct: 795 MAVDEVKNYSVLEIATPDRPGLLARIGRIFVEYDIELQAAKIQTLGERVEDVFFITD-AK 853
Query: 101 GYAIKDPKRLSTIKELLFNVL 121
I DP+ I++ + + L
Sbjct: 854 QQPITDPELCEAIQQAICDEL 874
>gi|392955012|ref|ZP_10320563.1| UTP-GlnB uridylyltransferase, GlnD [Hydrocarboniphaga effusa AP103]
gi|391857669|gb|EIT68200.1| UTP-GlnB uridylyltransferase, GlnD [Hydrocarboniphaga effusa AP103]
Length = 894
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL T DR GLLS I RIF++ L + A+I TIG + +D F++TD P+ DP +D
Sbjct: 820 LELVTADRPGLLSMIGRIFQKRGLLLDAAKIGTIGERAEDVFFITDADHKPISDPSQLDE 879
Query: 324 IR 325
+R
Sbjct: 880 LR 881
>gi|170723245|ref|YP_001750933.1| PII uridylyl-transferase [Pseudomonas putida W619]
gi|229487482|sp|B1JBR2.1|GLND_PSEPW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|169761248|gb|ACA74564.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida W619]
Length = 900
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ I RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 324 IRRQIGHTKLQVKRSTILAP 343
++ I +LQ +++ +P
Sbjct: 877 LQEAIVQ-QLQAGQASDASP 895
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFNFP----------- 801
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+LN ++ T++ + + DRP LL I + + + + T
Sbjct: 802 ---------PQVTILNDAQRAVTILEITAPDRPGLLARIGRIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 260
F+I D P+S +E ++Q L+A AS
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQASDAS 894
>gi|399912538|ref|ZP_10780852.1| PII uridylyl-transferase [Halomonas sp. KM-1]
Length = 893
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 259 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 317
A+E LEL DR GLL+ + RIF E +S+ A+I+T+G +V+D F++TD +G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITDKSGAPLTD 874
Query: 318 PKIIDSIRRQI 328
P+ +R ++
Sbjct: 875 PERQQRLRARL 885
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
P E T +E T DRPGL + V + + ++ A+I T +R V +TD S G +
Sbjct: 814 PANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITDKS-GAPL 872
Query: 105 KDPKRLSTIKELLFNVL 121
DP+R ++ L VL
Sbjct: 873 TDPERQQRLRARLIEVL 889
>gi|422297483|ref|ZP_16385118.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
gi|407991091|gb|EKG33029.1| (protein-PII) uridylyltransferase [Pseudomonas avellanae BPIC 631]
Length = 788
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 706 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 765
Query: 324 IRRQI 328
++ I
Sbjct: 766 LQEAI 770
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 591 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 650
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 651 NPERIQDIRDGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 689
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 690 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 741
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 742 RVEDVFFITDANNQPLS 758
>gi|28868738|ref|NP_791357.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213969116|ref|ZP_03397255.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
gi|301383989|ref|ZP_07232407.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato Max13]
gi|302061957|ref|ZP_07253498.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato K40]
gi|302134052|ref|ZP_07260042.1| PII uridylyl-transferase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|38257473|sp|Q886P5.1|GLND_PSESM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28851977|gb|AAO55052.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213926114|gb|EEB59670.1| [protein-pII] uridylyltransferase [Pseudomonas syringae pv. tomato
T1]
Length = 898
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQEAI 880
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIRDGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNQPLS 868
>gi|422657758|ref|ZP_16720197.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|331016365|gb|EGH96421.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 898
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQEAI 880
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIRDGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNQPLS 868
>gi|386287193|ref|ZP_10064368.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
gi|385279725|gb|EIF43662.1| PII uridylyl-transferase [gamma proteobacterium BDW918]
Length = 889
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 32/145 (22%)
Query: 216 MVNTGRTEAYQEFYIRHVDGLPISSEAER-ERVIQCLE----------AAIERRASEGLE 264
+ N+G FY+ DG I R +I+ ++ A IERR +
Sbjct: 732 IYNSGTGYTLDTFYVLGADGESIGDNPSRIAHIIEFMQEHLEHPERFPATIERRTPRQMR 791
Query: 265 L--------------------ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKD 304
L E+ T DR GLL+ + RIF + + ++ A+I+T+G +V+D
Sbjct: 792 LFSIPTRTSMATDLNKGHTVLEVITPDRPGLLARLARIFNQYDIRLQNAKIATLGERVED 851
Query: 305 TFYVTDVTGNPV-DPKIIDSIRRQI 328
F++TD P+ DPK+ + I++ I
Sbjct: 852 VFFITDENQRPIDDPKLCEEIQQAI 876
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 21/135 (15%)
Query: 1 MDVFNVIDCDGKKIRDK-----EVIDYIQQRLETDASFAPSL---------------RSS 40
+D F V+ DG+ I D +I+++Q+ LE F ++ R+S
Sbjct: 741 LDTFYVLGADGESIGDNPSRIAHIIEFMQEHLEHPERFPATIERRTPRQMRLFSIPTRTS 800
Query: 41 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 100
+ + HT +E DRPGL + + + + NA+I T +R V +TD +
Sbjct: 801 MATDLNKGHTVLEVITPDRPGLLARLARIFNQYDIRLQNAKIATLGERVEDVFFITDENQ 860
Query: 101 GYAIKDPKRLSTIKE 115
I DPK I++
Sbjct: 861 -RPIDDPKLCEEIQQ 874
>gi|404496286|ref|YP_006720392.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|418064989|ref|ZP_12702365.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
gi|78193893|gb|ABB31660.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter metallireducens GS-15]
gi|373563262|gb|EHP89463.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter metallireducens RCH3]
Length = 899
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 92/199 (46%), Gaps = 26/199 (13%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
D PGLFS + V+A N++ A+I T ++ A + + G+ I D R + E
Sbjct: 723 DVPGLFSMITGVMAANGINILGAQIHTSSNGKALDILQVNSPQGFIITDVGRWKRVNE-- 780
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 177
D R+ T +P + +R+ ++ EKA R S+R ++
Sbjct: 781 --------DLRQVLTGKTPVASLVAKRQRPTLL--------AEKAKPRF---SARVEIDN 821
Query: 178 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 237
+ DYTVI + + D+ +L+ I TLT++ + ++T + FY++ + G
Sbjct: 822 -EVSSDYTVIDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVKDIFGHK 880
Query: 238 ISS----EAERERVIQCLE 252
I++ E RER+++ +E
Sbjct: 881 ITNPERLEEIRERLLKAVE 899
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ T D+VG+L IT E L I ++IST +V D FYV D+ G+ + +P+ ++
Sbjct: 830 IDIYTHDKVGILYQITSTLTELGLYIGVSKISTKVDQVADVFYVKDIFGHKITNPERLEE 889
Query: 324 IRRQI 328
IR ++
Sbjct: 890 IRERL 894
>gi|422608963|ref|ZP_16680922.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
gi|330894590|gb|EGH27251.1| PII uridylyl-transferase [Pseudomonas syringae pv. mori str.
301020]
Length = 898
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQDAI 880
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V D+ G +
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSSGD 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERVQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E DRPGL + + + + ++ NA+I T +R V +TD + + + DP+
Sbjct: 814 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNHPLSDPQL 872
Query: 110 LST-----IKELLFNVLRGYD 125
S +K+L N G+D
Sbjct: 873 CSQLQDAIVKQLSVNSEPGHD 893
>gi|422594799|ref|ZP_16669089.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330985106|gb|EGH83209.1| PII uridylyl-transferase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 898
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQDAI 880
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 760
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I+ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERVQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E DRPGL + + + + ++ NA+I T +R V +TD + + + DP+
Sbjct: 814 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNHPLSDPQL 872
Query: 110 LST-----IKELLFNVLRGYD 125
S +K+L N G+D
Sbjct: 873 CSQLQDAIVKQLSVNSEPGHD 893
>gi|416018072|ref|ZP_11565073.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320323122|gb|EFW79211.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
B076]
Length = 898
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQDAI 880
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E DRPGL + + + + ++ NA+I T +R V +TD + + + DP+
Sbjct: 814 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNHPLSDPQL 872
Query: 110 LST-----IKELLFNVLRGYD 125
S +K+L N G+D
Sbjct: 873 CSQLQDAIVKQLSVNSEPGHD 893
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 760
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R I+ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERAQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|71735709|ref|YP_275980.1| PII uridylyl-transferase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|416025723|ref|ZP_11569371.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|91206748|sp|Q48F57.1|GLND_PSE14 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|71556262|gb|AAZ35473.1| protein-P-II uridylyltransferase [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320329606|gb|EFW85595.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 898
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQDAI 880
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 760
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I+ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERVQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E DRPGL + + + + ++ NA+I T +R V +TD + + + DP+
Sbjct: 814 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNHPLSDPQL 872
Query: 110 LST-----IKELLFNVLRGYD 125
S +K+L N G+D
Sbjct: 873 CSQLQDAIVKQLSVNSEPGHD 893
>gi|410663631|ref|YP_006916002.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
gi|409025988|gb|AFU98272.1| PII uridylyl-transferase [Simiduia agarivorans SA1 = DSM 21679]
Length = 897
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 49/69 (71%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LE+ + DR GLL+ I R+F ++ + ++ A+I+T+G +V+D F++TD GNP+ DP +
Sbjct: 821 LEVISPDRPGLLAAIGRVFLQHGIQLQNAKIATLGERVEDIFFITDHDGNPLSDPAQCEQ 880
Query: 320 IIDSIRRQI 328
+ D+IR+ +
Sbjct: 881 LQDNIRKAL 889
>gi|289626037|ref|ZP_06458991.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
NCPPB 3681]
gi|289651446|ref|ZP_06482789.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
2250]
gi|422582741|ref|ZP_16657874.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|298157152|gb|EFH98240.1| [Protein-PII] uridylyltransferase [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330867581|gb|EGH02290.1| PII uridylyl-transferase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 898
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQDAI 880
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 760
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I+ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERVQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E DRPGL + + + + ++ NA+I T +R V +TD + + + DP+
Sbjct: 814 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNHPLSDPQL 872
Query: 110 LST-----IKELLFNVLRGYD 125
S +K+L N G+D
Sbjct: 873 CSQLQDAIVKQLSVNSEPGHD 893
>gi|422671223|ref|ZP_16730589.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
gi|330968963|gb|EGH69029.1| PII uridylyl-transferase [Pseudomonas syringae pv. aceris str.
M302273]
Length = 898
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 322 --DSIRRQI 328
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|66044589|ref|YP_234430.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae B728a]
gi|75503002|sp|Q4ZWT0.1|GLND_PSEU2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|63255296|gb|AAY36392.1| Protein-P-II uridylyltransferase [Pseudomonas syringae pv. syringae
B728a]
Length = 898
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 322 --DSIRRQI 328
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|260574117|ref|ZP_05842122.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
gi|259023583|gb|EEW26874.1| UTP-GlnB uridylyltransferase, GlnD [Rhodobacter sp. SW2]
Length = 914
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 35/214 (16%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+FS + LA + N+V+A +T D A V S G + RL +
Sbjct: 729 FALHDHPGIFSRLAGALALVGANIVDARTYTSKDGYATAVFWVQDSEGRPY-EVARLPRL 787
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
+ ++ L+G R+A + RER I FD+ E
Sbjct: 788 RGMIDKTLKGEVLPREALADRDK--VKKREREFRFPTHITFDNEGSE------------- 832
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + ++ T + FY+
Sbjct: 833 ------------IYTIIEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYV 880
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
+ + GL + ++A++E LE + + +EG E
Sbjct: 881 KDMFGLKLHTKAKQE----ALETKLRQAIAEGAE 910
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR +++ I A I+T G +V DTFYV D+ G
Sbjct: 837 IEVDTRDRPGLLYDLTRTLAASNIYIASAVIATFGAQVVDTFYVKDMFG 885
>gi|440744204|ref|ZP_20923508.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
gi|440374218|gb|ELQ10954.1| PII uridylyl-transferase [Pseudomonas syringae BRIP39023]
Length = 898
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 322 --DSIRRQI 328
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V D+ G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|381199347|ref|ZP_09906497.1| PII uridylyl-transferase [Sphingobium yanoikuyae XLDN2-5]
Length = 920
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 26/230 (11%)
Query: 36 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 95
SL + P T + TD PGLF + + N+++A I T D A +
Sbjct: 714 SLSIAAQYYPQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFL 773
Query: 96 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 155
G A P++L+ IK + + SLS NR R + ++ + R
Sbjct: 774 VQDPLGGAFHSPEQLARIKAAI-------------EDSLS-----NRHRMITKL--EARP 813
Query: 156 YERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 214
R R+E P V + N + +TVI + ++DRP LLF + L + V
Sbjct: 814 LPRTRAEAFRIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHS 868
Query: 215 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
V T A FY+ + G I S+A + + + L A E LE
Sbjct: 869 AHVATYGERAVDTFYVTDLLGGKIESKARLQTLERRLLEAAGGEVGEALE 918
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
+E+ DR LL + ++ +++ A ++T G + DTFYVTD+ G ++ K
Sbjct: 841 IEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVTDLLGGKIESK 895
>gi|422638289|ref|ZP_16701720.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
gi|330950684|gb|EGH50944.1| PII uridylyl-transferase [Pseudomonas syringae Cit 7]
Length = 898
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 322 --DSIRRQI 328
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|302187896|ref|ZP_07264569.1| PII uridylyl-transferase [Pseudomonas syringae pv. syringae 642]
Length = 898
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 322 --DSIRRQI 328
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|339486111|ref|YP_004700639.1| PII uridylyl-transferase [Pseudomonas putida S16]
gi|338836954|gb|AEJ11759.1| PII uridylyl-transferase [Pseudomonas putida S16]
Length = 897
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 814 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 873
Query: 324 IRRQIGHTKLQVKRSTILAP 343
++ I +LQ +++ +P
Sbjct: 874 LQEAIVQ-QLQAGQASDASP 892
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 699 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 758
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 759 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 798
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 799 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 849
Query: 223 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 260
F+I D P+S +E ++Q L+A AS
Sbjct: 850 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQASDAS 891
>gi|422645648|ref|ZP_16708783.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330959197|gb|EGH59457.1| PII uridylyl-transferase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 898
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSQ 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQEAI 880
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 75/194 (38%), Gaps = 33/194 (17%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIKDPK 108
T I D+ F+ A + L+ N+ +A I T + + + V DH G +P+
Sbjct: 704 TQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGNNPE 763
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAVGRV 166
R+ I++ L L DD+ P I+ R R+L F
Sbjct: 764 RIQDIRDGLTEALHNPDDY---------PTIIKRRVPRQLKHFAF--------------- 799
Query: 167 EDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 800 -----APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVE 854
Query: 226 QEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 855 DVFFITDANNQPLS 868
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E DRPGL + V + + ++ NA+I T +R V +TD + + DP+
Sbjct: 814 TVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNQPLSDPQL 872
Query: 110 LSTIKELLFNVL 121
S ++E + L
Sbjct: 873 CSQLQEAIVKQL 884
>gi|431801156|ref|YP_007228059.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
gi|430791921|gb|AGA72116.1| PII uridylyl-transferase [Pseudomonas putida HB3267]
Length = 900
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 324 IRRQIGHTKLQVKRSTILAP 343
++ I +LQ +++ +P
Sbjct: 877 LQEAIVQ-QLQAGQASDASP 895
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 260
F+I D P+S +E ++Q L+A AS
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAGQASDAS 894
>gi|294676023|ref|YP_003576638.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
gi|294474843|gb|ADE84231.1| PII uridylyl-transferase [Rhodobacter capsulatus SB 1003]
Length = 920
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 101/240 (42%), Gaps = 35/240 (14%)
Query: 29 TDASFAPSLRS------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 80
T A FA LR + + P +H T F +D PG+FS + LA + NVV+A
Sbjct: 701 THAIFAEMLRGLGDDEIRIDLDPDLDHDATRAAFALSDHPGIFSRLAGALALVGANVVDA 760
Query: 81 EIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
+T D A V S G+ + K L ++ ++ L+G R A
Sbjct: 761 RTYTSKDGYATAVFWVQDSEGHPYEATK-LPRLRGMIEKTLKGEVVARDA---------- 809
Query: 141 NRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLF 199
DRD +++K R + +T N D YT++ + ++DRP LL+
Sbjct: 810 ----------LKDRD--KIKK---REREFRFPTHITFDNEGSDIYTIVEVDTRDRPGLLY 854
Query: 200 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259
D+ L + ++ T + FY++ + GL + S +E + + L AI R A
Sbjct: 855 DLTRALASSNIYIASAVIATYGAQVVDTFYVKDMFGLKLHSGQRQESLEKRLRDAIIRGA 914
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR +++ I A I+T G +V DTFYV D+ G
Sbjct: 842 VEVDTRDRPGLLYDLTRALASSNIYIASAVIATYGAQVVDTFYVKDMFG 890
>gi|89092087|ref|ZP_01165042.1| PII uridylyl-transferase [Neptuniibacter caesariensis]
gi|89083822|gb|EAR63039.1| PII uridylyl-transferase [Oceanospirillum sp. MED92]
Length = 899
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ T DR GLL+ I IF ++LS+++A+I+++G +V+D F++TD G P+ DP++
Sbjct: 823 LEVITPDRPGLLARIGGIFAAHNLSVRKAKIASVGERVEDFFFITDEQGLPISDPELCQQ 882
Query: 324 IRRQI 328
++ +I
Sbjct: 883 LQNEI 887
>gi|257487087|ref|ZP_05641128.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. tabaci
str. ATCC 11528]
Length = 403
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 321 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 380
Query: 324 IRRQI 328
++ I
Sbjct: 381 LQDAI 385
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 206 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 265
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I+ L LR DD+ P I+ R R+L F
Sbjct: 266 NPERVQEIRNGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 304
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 305 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 356
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 357 RVEDVFFITDANNHPLS 373
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E DRPGL + + + + ++ NA+I T +R V +TD + + + DP+
Sbjct: 319 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNHPLSDPQL 377
Query: 110 LST-----IKELLFNVLRGYD 125
S +K+L N G+D
Sbjct: 378 CSQLQDAIVKQLSVNSEPGHD 398
>gi|427409438|ref|ZP_18899640.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
gi|425711571|gb|EKU74586.1| protein-P-II uridylyltransferase [Sphingobium yanoikuyae ATCC
51230]
Length = 918
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 92/230 (40%), Gaps = 26/230 (11%)
Query: 36 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 95
SL + P T + TD PGLF + + N+++A I T D A +
Sbjct: 712 SLSIAAQYYPQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFL 771
Query: 96 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 155
G A P++L+ IK + + SLS NR R + ++ + R
Sbjct: 772 VQDPLGGAFHSPEQLARIKAAI-------------EDSLS-----NRHRMITKL--EARP 811
Query: 156 YERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 214
R R+E P V + N + +TVI + ++DRP LLF + L + V
Sbjct: 812 LPRTRAEAFRIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHS 866
Query: 215 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
V T A FY+ + G I S+A + + + L A E LE
Sbjct: 867 AHVATYGERAVDTFYVTDLLGGKIESKARLQTLERRLLEAAGGEVGEALE 916
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
+E+ DR LL + ++ +++ A ++T G + DTFYVTD+ G ++ K
Sbjct: 839 IEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVTDLLGGKIESK 893
>gi|410089166|ref|ZP_11285792.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
gi|409763453|gb|EKN48413.1| PII uridylyl-transferase [Pseudomonas viridiflava UASWS0038]
Length = 899
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 817 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNHPLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQEAI 881
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDNEGGSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPVRVQEIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I D P+S
Sbjct: 853 RVEDVFFITDADNHPLS 869
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E DRPGL + + + + ++ NA+I T +R V +TD + + + DP+
Sbjct: 815 TVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNHPLSDPQL 873
Query: 110 LSTIKELLFNVL 121
S ++E + L
Sbjct: 874 CSRLQEAIIKQL 885
>gi|404398828|ref|ZP_10990412.1| PII uridylyl-transferase [Pseudomonas fuscovaginae UPB0736]
Length = 900
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVTDAQNQPLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQDAI 881
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ AV+ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAVMDQLNLNIHDARIITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
PKR+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPKRVKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F++ P+S
Sbjct: 853 RVEDVFFVTDAQNQPLS 869
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG K+IRD + DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDTDGDSIGDNPKRVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ T +E + DRPGL + + + + ++ NA+I T +R V VTD
Sbjct: 805 -TIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFVTD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + DP+ S +++ + L
Sbjct: 863 AQNQPLSDPQLCSRLQDAIVEQL 885
>gi|407787724|ref|ZP_11134863.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
gi|407199003|gb|EKE69027.1| PII uridylyl-transferase [Celeribacter baekdonensis B30]
Length = 940
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 88/208 (42%), Gaps = 29/208 (13%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F TD G+FS + LA + NVV+A +T D A V + G + RL +
Sbjct: 754 FALTDHHGIFSRLAGALALVGANVVDARTYTSKDGYATAVFWIQDNDGNPFEQA-RLPRL 812
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP 173
++++ +LRG R+A D RD + + E K P
Sbjct: 813 RQMIDKILRGEMGARQA--------------------LDSRD------KIKKRESKFRVP 846
Query: 174 QVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
+ E +T+I + ++DRP LL+D+ L + + T + FY++
Sbjct: 847 TSISFDNEGSEIFTIIEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVK 906
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRA 259
+ G+ SE++R + + L AI++ A
Sbjct: 907 DMFGMKFHSESKRRTLEKKLREAIDQGA 934
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR+ N++SI A+I+T G +V D FYV D+ G
Sbjct: 862 IEVDTRDRPGLLYDLTRVLAANNVSIATAQIATYGAQVVDVFYVKDMFG 910
>gi|104783197|ref|YP_609695.1| PII uridylyl-transferase [Pseudomonas entomophila L48]
gi|122402173|sp|Q1I624.1|GLND_PSEE4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|95112184|emb|CAK16911.1| putative [Protein-PII] uridylyltransferase (PII
uridylyl-transferase) (Uridylyl removing enzyme) (UTase)
[Pseudomonas entomophila L48]
Length = 900
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ I RIF E +S++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 324 IRRQIGHTKLQVKRSTILAP 343
++ I +LQ +++ +P
Sbjct: 877 LQEAIIQ-QLQAGQASEASP 895
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 90/222 (40%), Gaps = 37/222 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A +A L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRTPEDY---------PAIIQRRVPRQLKHFDFP----------- 801
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+LN ++ T++ + + DRP LL I + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRAS 260
F+I D P+S +E +IQ L+A AS
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIIQQLQAGQASEAS 894
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 21/143 (14%)
Query: 1 MDVFNVIDCDGKKIRD-----KEVIDYIQQRLETDASFAPSLR-------------SSVG 42
+D + V+D DG I D K++ D + + L T + ++ V
Sbjct: 746 LDTYIVLDNDGGSIGDNPQRVKQIRDGLTEALRTPEDYPAIIQRRVPRQLKHFDFPPQVT 805
Query: 43 VMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 100
++ + T +E T DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 806 ILNDAQRPVTILEITAPDRPGLLARIGRIFLEFDISLQNAKIATLGERVEDVFFITD-AD 864
Query: 101 GYAIKDPKRLSTIKELLFNVLRG 123
+ DP+ S ++E + L+
Sbjct: 865 NQPLSDPQLCSRLQEAIIQQLQA 887
>gi|422628315|ref|ZP_16693524.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. pisi
str. 1704B]
gi|330936832|gb|EGH40981.1| PII uridylyl-transferase [Pseudomonas syringae pv. pisi str. 1704B]
Length = 623
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 541 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 600
Query: 324 IRRQI 328
++ +I
Sbjct: 601 LQDEI 605
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 426 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 485
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 486 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 524
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 525 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 576
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 577 RVEDVFFITDANNHPLS 593
>gi|339018851|ref|ZP_08644974.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
gi|338752065|dbj|GAA08278.1| uridylyltransferase PII [Acetobacter tropicalis NBRC 101654]
Length = 983
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 29/229 (12%)
Query: 28 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 87
E DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 762 EADAKDAP-LTVEVLPLPARGVTEVTVYTIDVPGLFSKIAGALALAGASIVDARIHTMMH 820
Query: 88 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 147
A + G A ++ RL+ + L+ L G D T ++ G + R+
Sbjct: 821 GMALDTFWIQDTAGSAYEETHRLARLSSLIEQALSGQLDI---GTEIARAGFGHMPLRMR 877
Query: 148 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLT 206
I P+V + N + YTVI + +DRP LL D+ ++
Sbjct: 878 AIHVP--------------------PRVVIDNGASNTYTVIEINGRDRPGLLHDVTAAMS 917
Query: 207 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCL 251
+ + + T A FY++ + GL I+ + R+R++ C+
Sbjct: 918 EENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLDEIRDRLLSCM 966
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL D+T E +L I A I+T G + D FYV D+ G + D K +D
Sbjct: 898 IEINGRDRPGLLHDVTAAMSEENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLDE 957
Query: 324 IRRQI 328
IR ++
Sbjct: 958 IRDRL 962
>gi|422587022|ref|ZP_16661693.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
gi|330872741|gb|EGH06890.1| PII uridylyl-transferase [Pseudomonas syringae pv. morsprunorum
str. M302280]
Length = 898
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSL 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQEAI 880
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 37/218 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIRDGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 260
F+I + P+S ++ L+ AI ++ S
Sbjct: 852 RVEDVFFITDANNQPLSD----PQLCSLLQEAIVKQLS 885
>gi|422651057|ref|ZP_16713856.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330964139|gb|EGH64399.1| PII uridylyl-transferase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 898
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSL 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQEAI 880
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 86/218 (39%), Gaps = 37/218 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIRDGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRAS 260
F+I + P+S ++ L+ AI ++ S
Sbjct: 852 RVEDVFFITDANNQPLSD----PQLCSLLQEAIVKQLS 885
>gi|422616472|ref|ZP_16685178.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
gi|330896056|gb|EGH28277.1| PII uridylyl-transferase [Pseudomonas syringae pv. japonica str.
M301072]
Length = 728
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 646 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 705
Query: 322 --DSIRRQI 328
D+I +Q+
Sbjct: 706 LQDAIVKQL 714
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 531 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 590
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 591 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 629
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 630 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 681
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 682 RVEDVFFITDANNHPLS 698
>gi|424071187|ref|ZP_17808613.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
gi|407999261|gb|EKG39647.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe037]
Length = 898
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 322 --DSIRRQI 328
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|398846487|ref|ZP_10603457.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
gi|398252519|gb|EJN37706.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM84]
Length = 900
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 324 IRRQIGHTKLQVKRSTILAP 343
++ I +LQ +++ +P
Sbjct: 877 LQEAIVQ-QLQAGQASESSP 895
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 92/223 (41%), Gaps = 40/223 (17%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFNFP----------- 801
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRQVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAAIERRASE 261
F+I D P+S +E ++Q L+A +ASE
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG---QASE 892
>gi|387770803|ref|ZP_10126978.1| protein-P-II uridylyltransferase [Pasteurella bettyae CCUG 2042]
gi|386903553|gb|EIJ68363.1| protein-P-II uridylyltransferase [Pasteurella bettyae CCUG 2042]
Length = 858
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 76/154 (49%), Gaps = 28/154 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 243
T I + KD+P L + + C +++ + + + T A+ F + +DG ++ +
Sbjct: 682 TGIFIYCKDQPSLFYKVACVISNKKLSIHDAQIMTSLDGYAFDTFIVTEIDGSLLNFDRR 741
Query: 244 RE---RVIQCLEAA------------------------IERRASEGLELELCTEDRVGLL 276
R+ +++ L++ + + E+EL D+ GLL
Sbjct: 742 RKLEKSIVEVLKSNDLPKLQGINNHRLQHFYVTTEVRFLNTIKNTHTEMELYALDKTGLL 801
Query: 277 SDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
+D++RIF E++L+I+ A+I+T+G KV+D F +T+
Sbjct: 802 ADVSRIFSEHNLNIQNAKITTVGEKVEDFFILTN 835
>gi|237800142|ref|ZP_04588603.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331022999|gb|EGI03056.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 898
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSR 875
Query: 324 IRRQI 328
++ I
Sbjct: 876 LQEAI 880
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L L DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALHNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNQPLS 868
Score = 38.1 bits (87), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E DRPGL + V + + ++ NA+I T +R V +TD + + DP+
Sbjct: 814 TVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITD-ANNQPLSDPQL 872
Query: 110 LSTIKELLFNVL 121
S ++E + L
Sbjct: 873 CSRLQEAIVKQL 884
>gi|424066534|ref|ZP_17803998.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440720411|ref|ZP_20900829.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440726539|ref|ZP_20906792.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443645006|ref|ZP_21128856.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
gi|408002133|gb|EKG42396.1| [protein-PII] uridylyltransferase [Pseudomonas syringae pv.
avellanae str. ISPaVe013]
gi|440365936|gb|ELQ03023.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34876]
gi|440366121|gb|ELQ03206.1| PII uridylyl-transferase [Pseudomonas syringae BRIP34881]
gi|443285023|gb|ELS44028.1| Protein PII--uridylyltransferase [Pseudomonas syringae pv. syringae
B64]
Length = 898
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 816 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 875
Query: 322 --DSIRRQI 328
D+I +Q+
Sbjct: 876 LQDAIVKQL 884
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 701 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 760
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 761 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 799
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 800 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 851
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 852 RVEDVFFITDANNHPLS 868
>gi|325278101|ref|ZP_08143616.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
gi|324096767|gb|EGB95098.1| PII uridylyl-transferase [Pseudomonas sp. TJI-51]
Length = 900
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 324 IRRQIGHTKLQVKRSTILAP 343
++ I +LQ + + +P
Sbjct: 877 LQEAIVQ-QLQAGQGSDTSP 895
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E T DRPGL + + + + ++ NA+I T +R V +TD + + DP+
Sbjct: 815 TILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITD-ADNQPLSDPQL 873
Query: 110 LSTIKELLFNVLRG 123
S ++E + L+
Sbjct: 874 CSRLQEAIVQQLQA 887
>gi|406707469|ref|YP_006757821.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
gi|406653245|gb|AFS48644.1| HD domain-containing protein,GlnD
PII-uridylyltransferase,nucleotidyltransferase family
protein [alpha proteobacterium HIMB59]
Length = 851
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 29/176 (16%)
Query: 182 KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG-MVNTGRTEAYQEFYIRHVDGLPISS 240
K+Y + + +R +L DIV Q + +++ + F++ I
Sbjct: 671 KEYGAVIVICPNRSGVLKDIVAGFNSSQINILGSRIISLNNNDIIDVFWVTSSIQKAIVE 730
Query: 241 EAERERVIQCLEAAIERRASEGLE---------------------------LELCTEDRV 273
+ E+ERVIQ + +++ + E + ++ + DR
Sbjct: 731 KNEQERVIQNITSSLNQEELETYQPLFQTKIKVEVEPRITIDNQMSKLVTTFQILSGDRQ 790
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 328
GLL DI +IF + ++S++ A+IST G KV D F +TD+ + D KI+ ++ Q+
Sbjct: 791 GLLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQITDLKNKKIKDTKILKTLEDQL 846
>gi|167032157|ref|YP_001667388.1| PII uridylyl-transferase [Pseudomonas putida GB-1]
gi|189041208|sp|B0KS97.1|GLND_PSEPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166858645|gb|ABY97052.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas putida GB-1]
Length = 900
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 324 IRRQIGHTKLQVKRSTILAP 343
++ I +LQ + + +P
Sbjct: 877 LQEAIVQ-QLQAGQGSDTSP 895
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 254
F+I D P+S +E ++Q L+A
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 888
>gi|423097068|ref|ZP_17084864.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
gi|397889129|gb|EJL05612.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q2-87]
Length = 777
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 694 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 753
Query: 324 IRRQI 328
++ I
Sbjct: 754 LQEAI 758
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 21/135 (15%)
Query: 1 MDVFNVIDCDGKKIRD-----KEVIDYIQQRLETDASF-------APSLRSSVGVMP--- 45
+D + V+D DG I D K++ D + + L A + P P
Sbjct: 623 LDTYIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPLVT 682
Query: 46 -----TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 100
+ T +E + DRPGL + + + + ++ NA+I T +R V +TD +
Sbjct: 683 IHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD-AH 741
Query: 101 GYAIKDPKRLSTIKE 115
+ DP+ S ++E
Sbjct: 742 NQPLSDPQLCSRLQE 756
>gi|372280408|ref|ZP_09516444.1| PII uridylyl-transferase [Oceanicola sp. S124]
Length = 921
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 101/251 (40%), Gaps = 50/251 (19%)
Query: 29 TDASFAPSLRSSVGVMPTEE------------HTSIEFTGTDRPGLFSEVCAVLADLHCN 76
T A+FA LR G +P +E T F D PG+F+ + LA + N
Sbjct: 702 TQAAFAGMLR---GGLPVDEIRIDLKADDDHDATRALFAMADHPGIFARLSGALALVGAN 758
Query: 77 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSP 136
VV+A +T D A + G A + RL + +++ +LRG R+A
Sbjct: 759 VVDARTYTTVDGYATAAFWVQDAEG-APYEASRLPRLTQMIHKILRGEVVTREAMQDRDR 817
Query: 137 PGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKD 193
I RER + FD+ E YT+I + ++D
Sbjct: 818 --IKKRERAFKVSTSVAFDNEGSE-------------------------IYTIIEVDTRD 850
Query: 194 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 253
RP LL D+ TL + ++ T + FY++ + GL + S++++ + LEA
Sbjct: 851 RPGLLHDLTRTLAASNVQISSAVIATYGEQVVDTFYVKDMFGLKLFSDSKQ----KALEA 906
Query: 254 AIERRASEGLE 264
+ + G E
Sbjct: 907 KLREAIAAGQE 917
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR +++ I A I+T G +V DTFYV D+ G
Sbjct: 844 IEVDTRDRPGLLHDLTRTLAASNVQISSAVIATYGEQVVDTFYVKDMFG 892
>gi|56695312|ref|YP_165660.1| PII uridylyl-transferase [Ruegeria pomeroyi DSS-3]
gi|81170627|sp|Q5LWE5.1|GLND_SILPO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56677049|gb|AAV93715.1| protein-P-II uridylyltransferase [Ruegeria pomeroyi DSS-3]
Length = 908
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 61/260 (23%)
Query: 27 LETDASFAPSLRS----------SVGVMPTEEHTSIE--FTGTDRPGLFSEVCAVLADLH 74
+ET +FA LR + + P E+ + F D PG+FS + LA +
Sbjct: 683 VETHVTFAEMLRQLEHSGDPGGIEIRLDPDEDRDATRACFAMADHPGIFSRMAGALALVG 742
Query: 75 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK-------RLSTIKELLFNVLRGYDDF 127
NVV+A +T D +VTD + I+D + RL + +++ L+G
Sbjct: 743 ANVVDARSYTTKDG-----YVTD---AFWIQDAEGHPYEAARLPRLSQMILKTLKGEVVA 794
Query: 128 RKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDY 184
R A S I RE+ + I FD+ + Y
Sbjct: 795 RDALKSRDK--IKKREKAFNVPTHITFDNEGSD-------------------------IY 827
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 244
T+I + ++DRP LL+D+ L + + ++ T + FY++ + GL SEA++
Sbjct: 828 TIIEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYVKDMFGLKYHSEAKQ 887
Query: 245 ERVIQCLEAAIERRASEGLE 264
+ LE + + +EG E
Sbjct: 888 ----RTLETKLRKAITEGAE 903
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R ++ I A I+T G +V D+FYV D+ G
Sbjct: 830 IEVDTRDRPGLLYDLARALAAANVYIANAVIATYGEQVVDSFYVKDMFG 878
>gi|254474863|ref|ZP_05088249.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
gi|214029106|gb|EEB69941.1| protein-P-II uridylyltransferase [Ruegeria sp. R11]
Length = 942
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 88/212 (41%), Gaps = 35/212 (16%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+F+ + LA + NVV+A +T D + G+ + RL +
Sbjct: 757 FCMADHPGIFARIAGALALVGANVVDARSYTTKDGYVTDAFWIQDTEGHPY-EADRLPRL 815
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
+++ L+G + + S I RER + I FD+ E
Sbjct: 816 SQMIHKTLKG--EVIAGEALKSRDKIKKRERAFNVPTHITFDNDGSE------------- 860
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 861 ------------IYTIIEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYV 908
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEG 262
+ + GL SEA++ + LEA + +EG
Sbjct: 909 KDMFGLKYYSEAKQ----KSLEAKLRSAIAEG 936
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R ++ I A I+T G +V D FYV D+ G
Sbjct: 865 IEVDTRDRPGLLYDLARTLAGANIYIANAVIATYGEQVVDAFYVKDMFG 913
>gi|422664985|ref|ZP_16724858.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330975404|gb|EGH75470.1| PII uridylyl-transferase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 380
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 298 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 357
Query: 322 --DSIRRQI 328
D+I +Q+
Sbjct: 358 LQDAIVKQL 366
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 183 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 242
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 243 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 281
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 282 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 333
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 334 RVEDVFFITDANNHPLS 350
>gi|154254033|ref|YP_001414857.1| PII uridylyl-transferase [Parvibaculum lavamentivorans DS-1]
gi|154157983|gb|ABS65200.1| metal dependent phosphohydrolase [Parvibaculum lavamentivorans
DS-1]
Length = 931
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 89/212 (41%), Gaps = 26/212 (12%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
PT + T + D PGLF+ A L N+V+A+I+T D A + G AI
Sbjct: 723 PTRDVTQLTLYTQDHPGLFARFAGACAALGMNIVDAKIFTTRDGMALDMLWVQDPEGLAI 782
Query: 105 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 164
+ +R+ ++E++ VL G +S P + E +
Sbjct: 783 SEQRRIIRLEEMIRKVLSG---------EISAPDAI----------------ESRTRRER 817
Query: 165 RVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
R E S PQV + N DYTVI + DRP L+ + L + + + T
Sbjct: 818 RAEAFSVAPQVFIDNDASDDYTVIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGER 877
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
A FY++ V G +++ +++ V + L A+
Sbjct: 878 AVDVFYVKDVIGHKVTNANKKKAVERHLLEAL 909
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 43/173 (24%)
Query: 182 KDYTVITMRSKDRPKLL--FDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+D T +T+ ++D P L F C M +V + T A +++ +GL IS
Sbjct: 725 RDVTQLTLYTQDHPGLFARFAGACAALGMN-IVDAKIFTTRDGMALDMLWVQDPEGLAIS 783
Query: 240 SEAERERVIQCLEAAI------ERRASEGLE----------------------------- 264
E+ R+I+ LE I E A + +E
Sbjct: 784 ---EQRRIIR-LEEMIRKVLSGEISAPDAIESRTRRERRAEAFSVAPQVFIDNDASDDYT 839
Query: 265 -LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GL+ ++R L+I A I+T G + D FYV DV G+ V
Sbjct: 840 VIEVNGLDRPGLVHALSRALFHLGLTIGSAHITTYGERAVDVFYVKDVIGHKV 892
>gi|429769827|ref|ZP_19301919.1| protein-P-II uridylyltransferase [Brevundimonas diminuta 470-4]
gi|429186183|gb|EKY27137.1| protein-P-II uridylyltransferase [Brevundimonas diminuta 470-4]
Length = 896
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 85/205 (41%), Gaps = 32/205 (15%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 102
P E + DRPGLF+++ A L+ +VV A + T +D A V G Y
Sbjct: 669 PLESTARVAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPY 728
Query: 103 AIKDPKRLS-TIKELLFNVLRGYDDFRKAKTS-LSPPGIMNRERRLHQIMFDDRDYERVE 160
++P+RL+ +K + VL+G A+TS + P + R + +F+ R R++
Sbjct: 729 GGREPRRLALLVKAMERAVLKG------ARTSAMQAPRVSAR-----RAVFEVRPVVRID 777
Query: 161 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
G VI + DRP LL D+ T++ Y V +
Sbjct: 778 ADTG-----------------TSAVVIEVSGADRPGLLADLARTISAHGYSTRSAHVASF 820
Query: 221 RTEAYQEFYIRHVDGLPISSEAERE 245
A FYI DG S+A+ E
Sbjct: 821 GERAVDGFYITDPDGRKPKSKAKLE 845
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 33/160 (20%)
Query: 187 ITMRSKDRPKLLFDIVCTLTDMQY-VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERE 245
+ + ++DRP L D+ TL+ VV + A F I+ G P R
Sbjct: 676 VAVAARDRPGLFADLAATLSMAGADVVGARLATADDGMALDVFEIQDGAGEPYGGREPRR 735
Query: 246 R--VIQCLEAAI---------------ERRA---------------SEGLELELCTEDRV 273
+++ +E A+ RRA + + +E+ DR
Sbjct: 736 LALLVKAMERAVLKGARTSAMQAPRVSARRAVFEVRPVVRIDADTGTSAVVIEVSGADRP 795
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
GLL+D+ R + S + A +++ G + D FY+TD G
Sbjct: 796 GLLADLARTISAHGYSTRSAHVASFGERAVDGFYITDPDG 835
>gi|333901617|ref|YP_004475490.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
gi|333116882|gb|AEF23396.1| UTP-GlnB uridylyltransferase, GlnD [Pseudomonas fulva 12-X]
Length = 897
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+EL DR GLL+ I RIF + LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 VELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPELCAR 876
Query: 324 IRRQIGHTKLQVKRSTILAPKPPK 347
+++ I V + + +P P +
Sbjct: 877 LQQTI------VTQLSASSPSPAQ 894
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A +A L+ N+ +A I T + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMAQLNLNIHDARILTSTSQFTLDTYIVLEAEGGSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
PKR+ I++ L + L D++ P I+ R R+L F
Sbjct: 762 NPKRIQQIRQSLIDTLMHPDEY---------PSIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I D V + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F++ D P+S
Sbjct: 853 RVEDVFFVTDADNQPLS 869
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E T DRPGL +++ + D +V NA+I T +R V VTD + + DP+
Sbjct: 815 TVVELTAPDRPGLLAKIGRIFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQPLSDPEL 873
Query: 110 LSTIKELLFNVL 121
+ +++ + L
Sbjct: 874 CARLQQTIVTQL 885
>gi|392380967|ref|YP_005030163.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
gi|356875931|emb|CCC96679.1| [protein-PII] uridylyltransferase [Azospirillum brasilense Sp245]
Length = 935
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 30/208 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPK 108
T + TD GLFS + LA ++V+A I+T N A V V D + G A +
Sbjct: 747 TEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAFESGD 806
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
+L+ + ++ VL G L P LH + +R R
Sbjct: 807 KLAKLSVMIEKVLSG---------QLKP---------LHDLT------KRKAPHASRTRV 842
Query: 169 KSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P+V + N +TVI + +DRP LL+D+ LT++ + ++T +A
Sbjct: 843 FHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDV 902
Query: 228 FYIRHVDGLPISSEAE----RERVIQCL 251
FY++ V GL ++ E++ RER++ L
Sbjct: 903 FYVKDVFGLKVTHESKLAQIRERLLHAL 930
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
HT IE G DRPGL ++ L +L + +A+I T+ ++A V +V D G +
Sbjct: 859 HTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKD-VFGLKVTHES 917
Query: 109 RLSTIKELLFNVL 121
+L+ I+E L + L
Sbjct: 918 KLAQIRERLLHAL 930
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ DR GLL D+TR +L I A+IST G K D FYV DV G
Sbjct: 862 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFG 910
>gi|331124067|ref|ZP_04591947.2| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331026351|gb|EGI06406.1| PII uridylyl-transferase [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 322
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 240 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPQLCSR 299
Query: 324 IRRQI 328
++ I
Sbjct: 300 LQEAI 304
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 86/226 (38%), Gaps = 33/226 (14%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 125 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDHEGGSIGN 184
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L L DD+ P I+ R R+L F
Sbjct: 185 NPERIQDIREGLTEALHNPDDY---------PTIIKRRVPRQLKHFAF------------ 223
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 224 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 275
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELC 268
F+I + P+S R+ + + + + G +L +
Sbjct: 276 RVEDVFFITDANNQPLSDPQLCSRLQEAIVKQLSVNSDTGGDLRIS 321
>gi|378949067|ref|YP_005206555.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
gi|359759081|gb|AEV61160.1| PII uridylyl-transferase [Pseudomonas fluorescens F113]
Length = 900
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQEAI 881
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 25/137 (18%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG K+IRD + DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ + T +E + DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKE 115
+ + DP+ S ++E
Sbjct: 863 AHNQPLSDPQLCSRLQE 879
>gi|388543702|ref|ZP_10146992.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
gi|388278259|gb|EIK97831.1| PII uridylyl-transferase [Pseudomonas sp. M47T1]
Length = 900
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQDAI 881
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLR 38
+D + V+D DG I D KE+ D IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDTDGGSIGDNPVRVKEIRDGLAEALRNPDDYPNIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ T +E + DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + DP+ S +++ + + L
Sbjct: 863 ADNQPLSDPQLCSRLQDAIVDHL 885
>gi|372268622|ref|ZP_09504670.1| PII uridylyl-transferase [Alteromonas sp. S89]
Length = 911
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 37/195 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHG--MVNTGRTEAYQEFYIRHVDGLPISSEA 242
T + + + DRP + F V T DM + H + ++ FY+ G P+ E
Sbjct: 720 TEVFVYTPDRPNV-FAAVVTGLDMLNLNIHDARLYSSAAGYTLDTFYVLDESGQPLLDEP 778
Query: 243 ERE-----------RVIQCLEAAIERRASEGLE--------------------LELCTED 271
R ++++ I+RR L+ LE+ + D
Sbjct: 779 HRLEQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPSQAHISTEPGDTYSTLEITSAD 838
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQIGH 330
R GLL+ I RIF + L + A+IST+G +V+D F++TD P+ D +I+++++ I
Sbjct: 839 RPGLLARIARIFISHDLRLHNAKISTLGERVEDIFHITDSEDQPLADNALIETLQQAICQ 898
Query: 331 TKLQVKRSTILAPKP 345
+L ++T L P+P
Sbjct: 899 -ELDAHQAT-LPPQP 911
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/135 (20%), Positives = 62/135 (45%), Gaps = 21/135 (15%)
Query: 1 MDVFNVIDCDGKKIRDK-----EVIDYIQQRLETDASFAPSLR---------------SS 40
+D F V+D G+ + D+ ++ + +Q+ L+ ++ ++ +
Sbjct: 761 LDTFYVLDESGQPLLDEPHRLEQIRNTLQEELKLVEDYSKVIKRRTPRRLKMFHLPSQAH 820
Query: 41 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 100
+ P + ++++E T DRPGL + + + + NA+I T +R + H+TD S
Sbjct: 821 ISTEPGDTYSTLEITSADRPGLLARIARIFISHDLRLHNAKISTLGERVEDIFHITD-SE 879
Query: 101 GYAIKDPKRLSTIKE 115
+ D + T+++
Sbjct: 880 DQPLADNALIETLQQ 894
>gi|330807779|ref|YP_004352241.1| phosphohydrolase [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695565|ref|ZP_17670055.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
gi|327375887|gb|AEA67237.1| putative Phosphohydrolase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|388009553|gb|EIK70804.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens Q8r1-96]
Length = 900
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQEAI 881
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG K+IRD + DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDTDGDSIGDNPARVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ + T +E + DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRQVTVLELSAPDRPGLLARIGHIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + DP+ S ++E + L
Sbjct: 863 AHNQPLSDPQLCSRLQEAIVQHL 885
>gi|114764208|ref|ZP_01443446.1| PII uridylyl-transferase [Pelagibaca bermudensis HTCC2601]
gi|114543360|gb|EAU46376.1| PII uridylyl-transferase [Roseovarius sp. HTCC2601]
Length = 915
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 6 VIDCDGKKIRDKEVIDY--IQQRLETDAS--FAPSLRS------SVGVMPTEEH--TSIE 53
+ D D K +R + Y Q L A FA LR + + P E+ T +
Sbjct: 669 LADWDAKDLRAETARHYDPYWQGLHVTAHKVFAELLRDIGDTEIRIDIHPDEDRDATRVC 728
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+F+ + L+ + NVV+A +T D A S G ++ R+ +
Sbjct: 729 FALADHPGIFARLAGALSLVGANVVDARTFTSKDGYATAAFWIQDSEGSPYEE-SRIPRL 787
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
++ + L G + + + LS + RE+ + I FD+ E
Sbjct: 788 RDTIRKTLMG--EVKPREAILSRGKLKKREKAFNVPTSIAFDNEGSE------------- 832
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL++ + ++ T + FY+
Sbjct: 833 ------------IYTIIEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYV 880
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRAS 260
+ + GL + ++++ + + L AA+E A+
Sbjct: 881 KDMFGLKFYTPSKQKTLERRLRAAMEDGAA 910
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R E+++ I A I+T G +V DTFYV D+ G
Sbjct: 837 IEVDTRDRPGLLYDLARTLSESNVYISSAVIATYGEQVVDTFYVKDMFG 885
>gi|70728556|ref|YP_258305.1| PII uridylyl-transferase [Pseudomonas protegens Pf-5]
gi|81170625|sp|Q4KHH8.1|GLND_PSEF5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68342855|gb|AAY90461.1| protein-P-II uridylyltransferase [Pseudomonas protegens Pf-5]
Length = 900
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQDAI 881
>gi|359787446|ref|ZP_09290493.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
gi|359295263|gb|EHK59538.1| PII uridylyl-transferase [Halomonas sp. GFAJ-1]
Length = 891
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 259 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 317
A+E LEL DR GLL+ + RIF E +++ A+I+T+G +V+D F++T+ G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITNKAGEPLTD 874
Query: 318 PKIIDSIRRQI 328
P+ +R ++
Sbjct: 875 PERQQQLRERL 885
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 60/140 (42%), Gaps = 20/140 (14%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD-----------------ASFAPSLRSSV 41
++ F V+D G+ IRD E I+ ++Q L E D F +
Sbjct: 751 LNTFIVLDNVGQPIRDLERIEEMRQHLVEELDDPDDYPDIVSRHTPRQLKHFKVPTEVLI 810
Query: 42 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
P E T +E T DRPGL + V + + + A+I T +R V +T+ G
Sbjct: 811 EQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITN-KAG 869
Query: 102 YAIKDPKRLSTIKELLFNVL 121
+ DP+R ++E L VL
Sbjct: 870 EPLTDPERQQQLRERLIEVL 889
>gi|352106684|ref|ZP_08961627.1| PII uridylyl-transferase [Halomonas sp. HAL1]
gi|350597727|gb|EHA13855.1| PII uridylyl-transferase [Halomonas sp. HAL1]
Length = 891
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 259 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 317
A+E LEL DR GLL+ + RIF E +S+ A+I+T+G +V+D F++T G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 318 PKIIDSIRRQI 328
P+ +R ++
Sbjct: 875 PERQQQLRERL 885
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 20/140 (14%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD-----------------ASFAPSLRSSV 41
++ F V+D G+ IRD I+ ++Q L E D F +
Sbjct: 751 LNTFIVLDSHGQPIRDPNHIEEMRQHLVEELDDPDDYPTIVTRHTPRQLKHFKVPTEVLI 810
Query: 42 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
P E T +E T DRPGL + V + + ++ A+I T +R V +T G
Sbjct: 811 EQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITT-KAG 869
Query: 102 YAIKDPKRLSTIKELLFNVL 121
+ DP+R ++E L VL
Sbjct: 870 EPLTDPERQQQLRERLIEVL 889
>gi|395445036|ref|YP_006385289.1| PII uridylyl-transferase [Pseudomonas putida ND6]
gi|388559033|gb|AFK68174.1| PII uridylyl-transferase [Pseudomonas putida ND6]
Length = 897
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 814 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 873
Query: 324 IRRQI 328
++ I
Sbjct: 874 LQEAI 878
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 699 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 758
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 759 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 798
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 799 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 849
Query: 223 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 254
F+I D P+S +E ++Q L+A
Sbjct: 850 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 885
>gi|148549394|ref|YP_001269496.1| PII uridylyl-transferase [Pseudomonas putida F1]
gi|397695319|ref|YP_006533200.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|421522651|ref|ZP_15969292.1| PII uridylyl-transferase [Pseudomonas putida LS46]
gi|166990446|sp|A5W852.1|GLND_PSEP1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148513452|gb|ABQ80312.1| metal dependent phosphohydrolase [Pseudomonas putida F1]
gi|397332049|gb|AFO48408.1| [Protein-PII] uridylyltransferase [Pseudomonas putida DOT-T1E]
gi|402753751|gb|EJX14244.1| PII uridylyl-transferase [Pseudomonas putida LS46]
Length = 900
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQEAI 881
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 254
F+I D P+S +E ++Q L+A
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 888
>gi|26988321|ref|NP_743746.1| PII uridylyl-transferase [Pseudomonas putida KT2440]
gi|386013537|ref|YP_005931814.1| protein GlnD [Pseudomonas putida BIRD-1]
gi|38257489|sp|Q88MI2.1|GLND_PSEPK RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|24983069|gb|AAN67210.1|AE016348_2 protein-pII uridylyltransferase [Pseudomonas putida KT2440]
gi|313500243|gb|ADR61609.1| GlnD [Pseudomonas putida BIRD-1]
Length = 900
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ + RIF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQEAI 881
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 88/216 (40%), Gaps = 37/216 (17%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A ++ L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMSQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L LR +D+ P I+ R R+L F
Sbjct: 762 NPQRVKQIRDGLTEALRNPEDY---------PTIIQRRVPRQLKHFDFP----------- 801
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+LN ++ T++ + + DRP LL + + + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILEITAPDRPGLLARLGRIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEA----ERERVIQCLEAA 254
F+I D P+S +E ++Q L+A
Sbjct: 853 RVEDVFFITDADNQPLSDPQLCSRLQEAIVQQLQAG 888
>gi|13474440|ref|NP_106008.1| PII uridylyl-transferase [Mesorhizobium loti MAFF303099]
gi|22256765|sp|Q98C27.1|GLND_RHILO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|14025193|dbj|BAB51794.1| uridylyltransferase [Mesorhizobium loti MAFF303099]
Length = 933
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQI 328
DR GLLS+IT + SL I A I+T G KV DTFYVTD+TG +D P I +IR ++
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRL 913
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 111
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPARIA 907
Query: 112 TIKELLFNVLRGYDDFRKAKT 132
TI+ L L G R K
Sbjct: 908 TIRNRLMATLEGIAPERGGKA 928
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 89/239 (37%), Gaps = 29/239 (12%)
Query: 28 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 87
E DA+ L + V E T I D P L S + N+V+A+I+T D
Sbjct: 715 EADAA-GKKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACVGAGGNIVDAQIFTTAD 773
Query: 88 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 147
A + + +R + L+ +VL G S P I R +
Sbjct: 774 GRALDTILISREFDRDEDERRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--- 822
Query: 148 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 207
+ +V K R E +++ + ++VI + DRP LL +I TL+D
Sbjct: 823 -----PKRGAKVFKIPPRAEIRNT--------LSNRFSVIEVEGLDRPGLLSEITGTLSD 869
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASEG 262
+ + + T + FY+ + G I S A R R++ LE R +
Sbjct: 870 LSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPARIATIRNRLMATLEGIAPERGGKA 928
>gi|339053462|ref|ZP_08648168.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC2047]
gi|330721330|gb|EGG99408.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC2047]
Length = 349
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 51/80 (63%), Gaps = 4/80 (5%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ T DR GLL+ I RIF EN L +++A+I+T+G +V+D F++T P+ D K+ D+
Sbjct: 263 VEVVTPDRPGLLARIGRIFLENELELQKAKIATLGERVEDVFFITGKDLKPLGDSKLHDA 322
Query: 324 IRRQIGHTKLQVKRSTILAP 343
++ +I Q+ S AP
Sbjct: 323 LKVEIC---TQLDESAQFAP 339
>gi|254454604|ref|ZP_05068041.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
gi|198269010|gb|EDY93280.1| protein-P-II uridylyltransferase [Octadecabacter arcticus 238]
Length = 932
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 27/207 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + F D PG+FS +C L+ + NVV+A +T D A S G ++ R
Sbjct: 743 TRVCFAMADHPGIFSRMCGALSLVGANVVDARTFTSKDGFATAAFWVQDSDGTPFEE-TR 801
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L +++++ L G I+ RE F DRD + + RV
Sbjct: 802 LPRLRKMIERTLHG--------------DIVPRE------AFADRDKIKKRERAFRVS-- 839
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
+T N + YT+I + ++DRP LL D+ TL + + ++ T + F
Sbjct: 840 ---TSITFDNEGSEIYTIIEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTF 896
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAI 255
Y++++ GL + + + + + L AI
Sbjct: 897 YVKNMFGLKYHEQEKCDALERKLHEAI 923
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR ++ I A I+T G +V DTFYV ++ G
Sbjct: 855 IEVDTRDRPGLLHDLTRTLANANVYIASAVIATYGEQVVDTFYVKNMFG 903
>gi|448748399|ref|ZP_21730033.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
gi|445564020|gb|ELY20152.1| Protein-PII uridylyltransferase [Halomonas titanicae BH1]
Length = 891
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 259 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 317
A+E LEL DR GLL+ + RIF E +S+ A+I+T+G +V+D F++T G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 318 PKIIDSIRRQI 328
P+ +R ++
Sbjct: 875 PERQQQLRERL 885
>gi|359394094|ref|ZP_09187147.1| uridylyltransferase [Halomonas boliviensis LC1]
gi|357971341|gb|EHJ93786.1| uridylyltransferase [Halomonas boliviensis LC1]
Length = 891
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 259 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 317
A+E LEL DR GLL+ + RIF E +S+ A+I+T+G +V+D F++T G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 318 PKIIDSIRRQI 328
P+ +R ++
Sbjct: 875 PERQQQLRERL 885
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 20/140 (14%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD-----------------ASFAPSLRSSV 41
++ F V+D G+ IRD I+ ++Q L E D F +
Sbjct: 751 LNTFIVLDSHGQPIRDPGHIEEMRQHLVEELDDPDDYPDIVTRHTPRQLKHFKVPTEVLI 810
Query: 42 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
P E T +E T DRPGL + V + + ++ A+I T +R V +T G
Sbjct: 811 EQDPANERTLLELTAPDRPGLLARVGRIFMEQDISLSAAKIATLGERVEDVFFITT-KAG 869
Query: 102 YAIKDPKRLSTIKELLFNVL 121
+ DP+R ++E L VL
Sbjct: 870 EPLTDPERQQQLRERLIEVL 889
>gi|433771601|ref|YP_007302068.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
gi|433663616|gb|AGB42692.1| (protein-PII) uridylyltransferase [Mesorhizobium australicum
WSM2073]
Length = 933
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQI 328
DR GLLS+IT + SL I A I+T G KV DTFYVTD+TG +D P I +IR ++
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRL 913
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 111
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I +P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDNPARIA 907
Query: 112 TIKELLFNVLRG 123
TI+ L L G
Sbjct: 908 TIRNRLIATLEG 919
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 93/235 (39%), Gaps = 30/235 (12%)
Query: 28 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 87
E DA+ L + V E T I D P L S + A N+V+A+I+T +D
Sbjct: 715 EADAA-GNKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSD 773
Query: 88 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 147
A + + +R + L+ +VL G S P I R +
Sbjct: 774 GRALDTILISREFDRDEDERRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--- 822
Query: 148 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 207
R +V K R E +++ + ++VI + DRP LL +I TL+D
Sbjct: 823 -----PRRGSKVFKIPPRAEIRNA--------LSNRFSVIEVEGLDRPGLLSEITGTLSD 869
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEA-AIER 257
+ + + T + FY+ + G I + A R R+I LE A+ER
Sbjct: 870 LSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRLIATLEGVALER 924
>gi|374578662|ref|ZP_09651758.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
gi|374426983|gb|EHR06516.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM471]
Length = 929
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 106 DPKRLSTIKELLFNVLRG 123
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 81/209 (38%), Gaps = 39/209 (18%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 103
T + D P L S + A N+V+A+I+T D RA + ++ D G
Sbjct: 739 TELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG-- 796
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
+R + I E++ +VL G L P ++ R
Sbjct: 797 ----RRATRIGEMIEDVLEG---------KLRLPEVVARR-----------------TVR 826
Query: 164 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
G+ P+VT+ N D YTVI M DRP LL+++ ++ + + V T
Sbjct: 827 GKARPFVIEPEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGE 886
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCL 251
A FY+ + G IS+ + + L
Sbjct: 887 RARDVFYVTDLLGAQISAPTRQSAIKSAL 915
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 851 IEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQISAPTRQSA 910
Query: 324 IRRQIGH 330
I+ + H
Sbjct: 911 IKSALTH 917
>gi|289675253|ref|ZP_06496143.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
syringae FF5]
Length = 299
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 47/69 (68%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ + +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 217 LELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCRQ 276
Query: 322 --DSIRRQI 328
D+I +Q+
Sbjct: 277 LQDAIVKQL 285
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V DH G
Sbjct: 102 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSKFTLDTYIVLDHEGGSIGN 161
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 162 NPERIQDIREGLTEALRNPDDY---------PTIIKRRVPRQLKHFAF------------ 200
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 201 --------APQVTIHNDAQRPVTVLELLAPDRPGLLARVGKIFLEFDLSLQNAKIATLGE 252
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 253 RVEDVFFITDANNHPLS 269
>gi|349699981|ref|ZP_08901610.1| PII uridylyl-transferase [Gluconacetobacter europaeus LMG 18494]
Length = 969
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 31/226 (13%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS++ +A ++V+A I T + A + G A
Sbjct: 761 LPARGVTEVTIYAADHPGLFSKIAGAVAIAGASIVDARIHTMTNGMALDTLWIQDAGGAA 820
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
++P++L+ + L+ L G + + ++ G RR+ I
Sbjct: 821 FEEPQQLARLSLLVEQALTGRININR---EIAQCGRRLSGRRMRAIHVP----------- 866
Query: 164 GRVEDKSSRPQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V + N + TV+ + +DRP LL D+ L++ + + + T
Sbjct: 867 ---------PRVVIDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGV 917
Query: 223 EAYQEFYIRHVDGLPISSEAERERV-------IQCLEAAIERRASE 261
A FY++ + GL I+ + +R+ +Q EAA +R++SE
Sbjct: 918 RAVDVFYVKDLFGLKITDKGRLDRIRTTLLAGLQEAEAAAQRQSSE 963
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 255 IERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ RAS + E+ DR GLL D+T E L I A I+T G + D FYV D+ G
Sbjct: 871 IDNRASNTCTVVEINGRDRPGLLHDVTAALSEQKLQIASAHITTYGVRAVDVFYVKDLFG 930
Query: 314 NPV-DPKIIDSIR 325
+ D +D IR
Sbjct: 931 LKITDKGRLDRIR 943
>gi|447915634|ref|YP_007396202.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
gi|445199497|gb|AGE24706.1| PII uridylyl-transferase [Pseudomonas poae RE*1-1-14]
Length = 897
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 322 --DSIRRQIGHTKLQVKRSTI 340
+I +Q+ T+ V R TI
Sbjct: 877 LQAAIVQQLSVTQEPVTRLTI 897
>gi|440737197|ref|ZP_20916770.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
gi|440382379|gb|ELQ18883.1| PII uridylyl-transferase [Pseudomonas fluorescens BRIP34879]
Length = 897
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 322 --DSIRRQIGHTKLQVKRSTI 340
+I +Q+ T+ V R TI
Sbjct: 877 LQAAIVQQLSVTQEPVTRLTI 897
>gi|319779935|ref|YP_004139411.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317165823|gb|ADV09361.1| protein-P-II uridylyltransferase [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 933
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQI 328
DR GLLS+IT + SL I A I+T G KV DTFYVTD+TG +D P I +IR ++
Sbjct: 855 DRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRL 913
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 111
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I +P R++
Sbjct: 849 IEVEGLDRPGLLSEITGTLSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDNPARIA 907
Query: 112 TIKELLFNVLRGYDDFRKAKT 132
TI+ L L G R K+
Sbjct: 908 TIRNRLMATLEGIVPERGGKS 928
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 29/238 (12%)
Query: 28 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 87
E DAS L + V E T I D P L S + A N+V+A+I+T +D
Sbjct: 715 EADAS-GNKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSD 773
Query: 88 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 147
A + + +R + L+ +VL G S P I R +
Sbjct: 774 GRALDTILISREFDRDEDERRRAERVGRLIEDVLSG--------KSWLPEMIEKRTK--- 822
Query: 148 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 207
R +V K R E +++ + ++VI + DRP LL +I TL+D
Sbjct: 823 -----PRRGSKVFKIPPRAEIRNT--------LSNRFSVIEVEGLDRPGLLSEITGTLSD 869
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASE 261
+ + + T + FY+ + G I + A R R++ LE + R +
Sbjct: 870 LSLDIASAHITTFGEKVIDTFYVTDLTGQKIDNPARIATIRNRLMATLEGIVPERGGK 927
>gi|338707473|ref|YP_004661674.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
gi|336294277|gb|AEI37384.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
pomaceae ATCC 29192]
Length = 923
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 99/248 (39%), Gaps = 26/248 (10%)
Query: 15 RDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLH 74
R +++ I+Q TD + S+ MP + T I D PG F + +
Sbjct: 701 RSDVIVENIRQMAATDKA-QKSISVKGKEMPAYDATMISLYAIDHPGFFYRIAGAIHATG 759
Query: 75 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 134
+++A I T D A + H+ G IK + L+ + + + + + +L
Sbjct: 760 GTILDARIHTTRDGMAMDNLLVQHTQGGIIKTGEHLNRMMQAIEDAATSHIRTSNKLAAL 819
Query: 135 SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKD 193
PP +F D VE P V + N D +TVI + ++D
Sbjct: 820 RPP------------LFWRGDAFHVE------------PSVFIDNQASDRFTVIEVNAQD 855
Query: 194 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 253
RP LL D+ C L + + + + T A FY+ + I+++ + + + L A
Sbjct: 856 RPALLHDLGCALFNARLTISSAHIATYGERAVDVFYVSDLLAHKITNQNRLKAIEKRLLA 915
Query: 254 AIERRASE 261
A ER S+
Sbjct: 916 AAERANSK 923
>gi|407777256|ref|ZP_11124526.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
gi|407300956|gb|EKF20078.1| PII uridylyl-transferase [Nitratireductor pacificus pht-3B]
Length = 934
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDSIRRQIG 329
DR GLLS++T + SL I A I+T G KV DTFYVTD+TG V P +++IR+
Sbjct: 853 DRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIVSPDRLETIRK--- 909
Query: 330 HTKLQVKRSTILAPKPPK 347
T LQ S + P K
Sbjct: 910 -TLLQTLESGVERPAKGK 926
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 38 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
R +G + + +E G DRPGL SE+ L+DL ++ +A I T ++ +VTD
Sbjct: 833 RVEIGNTLSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTD 892
Query: 98 HSTGYAIKDPKRLSTIKELLFNVLR-GYDDFRKAKT 132
TG I P RL TI++ L L G + K KT
Sbjct: 893 -LTGQKIVSPDRLETIRKTLLQTLESGVERPAKGKT 927
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 89/217 (41%), Gaps = 28/217 (12%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D P L S + + N+V+A+I+T A + + +
Sbjct: 731 EAVTEITVFAPDHPRLLSIIAGACSAAGANIVDAQIFTTTHGRALDTILISREFDFDADE 790
Query: 107 PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 166
+R I +L+ +VL G S P I R + R + + V RV
Sbjct: 791 RRRAERIGKLIEDVLSG--------KSYLPEMIEKRAK--------PRRGTKAFRVVPRV 834
Query: 167 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
E ++ + ++V+ +R DRP LL ++ TL+D+ + + T +
Sbjct: 835 EIGNT--------LSNRFSVVEVRGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVID 886
Query: 227 EFYIRHVDGLPISS----EAERERVIQCLEAAIERRA 259
FY+ + G I S E R+ ++Q LE+ +ER A
Sbjct: 887 TFYVTDLTGQKIVSPDRLETIRKTLLQTLESGVERPA 923
>gi|398826993|ref|ZP_10585213.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
gi|398219320|gb|EJN05805.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. YR681]
Length = 929
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 106 DPKRLSTIKELLFNVLRG 123
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 324 IRRQIGH 330
I+ + H
Sbjct: 911 IKSALTH 917
>gi|307546396|ref|YP_003898875.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
gi|307218420|emb|CBV43690.1| PII uridylyl-transferase [Halomonas elongata DSM 2581]
Length = 926
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 259 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
A+E LEL DR GLL+ + RIF E +++ A+I+T+G +V+D F++TD G P+
Sbjct: 848 ANERTLLELVAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGAPL 905
>gi|62288144|sp|Q89VX9.2|GLND_BRAJA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 106 DPKRLSTIKELLFNVLRG 123
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 324 IRRQIGH 330
I+ + H
Sbjct: 911 IKSALTH 917
>gi|384214647|ref|YP_005605811.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
gi|354953544|dbj|BAL06223.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 6]
Length = 929
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 106 DPKRLSTIKELLFNVLRG 123
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 324 IRRQIGH 330
I+ + H
Sbjct: 911 IKSALTH 917
>gi|389879349|ref|YP_006372914.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
gi|388530133|gb|AFK55330.1| [protein-PII] uridylyltransferase [Tistrella mobilis KA081020-065]
Length = 933
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 26/208 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
+I D GLF+ V +A N+V+A I T D A S A D R
Sbjct: 727 AAITVYAPDHHGLFAGVAGAMALAGGNIVDARIVTTTDGMALDTFWVQDSDRSAYDDEVR 786
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
++ +++L+ L G + R AK + RD + R +
Sbjct: 787 VARMRDLVGRTLSG--ELRPAKA-----------------LAARRDGPK------RTDVF 821
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P+V + N TVI + ++DRP LLF I L+D+ + V T A F
Sbjct: 822 QVTPRVLIDNRASNTQTVIEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTF 881
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIE 256
Y++ V GL I+ + + RV + L AA++
Sbjct: 882 YVKDVFGLKITHQGKLTRVREELLAALD 909
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ DR GLL IT + + +L+I A ++T G + DTFYV DV G
Sbjct: 840 IEVTARDRPGLLFAITSVLSDLALTISSAHVATYGERAVDTFYVKDVFG 888
>gi|383775112|ref|YP_005454181.1| [protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
gi|381363239|dbj|BAL80069.1| [Protein-PII] uridylyltransferase [Bradyrhizobium sp. S23321]
Length = 930
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 903
Query: 106 DPKRLSTIKELLFNVLRG 123
P R S IK L +V+ G
Sbjct: 904 APTRQSAIKSALTHVMAG 921
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 910
Query: 324 IRRQIGH 330
I+ + H
Sbjct: 911 IKSALTH 917
>gi|94496584|ref|ZP_01303160.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
gi|94423944|gb|EAT08969.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Sphingomonas sp.
SKA58]
Length = 920
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 97/247 (39%), Gaps = 29/247 (11%)
Query: 19 VIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVV 78
+I +Q LE+ S L + P T + D PGLF V + N++
Sbjct: 700 LIHNVQHILESGDS---PLSIAAQYYPQRGATLVTVYAADHPGLFYRVAGAIHLAGGNII 756
Query: 79 NAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG 138
+A I T D A + G A P++L I+ + + SLS
Sbjct: 757 DARIHTTRDGVAIDNFLVQDPLGGAFHSPEQLKRIRSAI-------------EDSLS--- 800
Query: 139 IMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKL 197
NR R + ++ R R R+E P V + N + +TVI + ++DRP L
Sbjct: 801 --NRHRLITKLA--ARPLPRTRAEAFRIE-----PNVLIDNKASNRFTVIEVNARDRPAL 851
Query: 198 LFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257
LF + L + V V T A FYI + G I S+A + + + L AA
Sbjct: 852 LFSLANALFQSKVTVHSAHVATYGERAVDTFYITDLIGGKIESKARLQTLERRLLAAAGG 911
Query: 258 RASEGLE 264
E L+
Sbjct: 912 EVGEALQ 918
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
+E+ DR LL + ++ +++ A ++T G + DTFY+TD+ G ++ K
Sbjct: 841 IEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYITDLIGGKIESK 895
>gi|332560239|ref|ZP_08414561.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
gi|332277951|gb|EGJ23266.1| PII uridylyl-transferase [Rhodobacter sphaeroides WS8N]
Length = 938
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 102
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 744 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 803
Query: 103 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 162
I RL + ++ L+G R+A DRD + +A
Sbjct: 804 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 840
Query: 163 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 841 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 894
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
+ FY++ + GL + + +E + + L AI
Sbjct: 895 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 929
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 861 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 909
>gi|429207795|ref|ZP_19199051.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
gi|428189188|gb|EKX57744.1| [Protein-PII] uridylyltransferase [Rhodobacter sp. AKP1]
Length = 930
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 102
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 103 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 162
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 163 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
>gi|27376027|ref|NP_767556.1| PII uridylyl-transferase [Bradyrhizobium japonicum USDA 110]
gi|27349166|dbj|BAC46181.1| bifunctional uridylyltransferase/uridylyl-removing enzyme
[Bradyrhizobium japonicum USDA 110]
Length = 997
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 913 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 971
Query: 106 DPKRLSTIKELLFNVLRG 123
P R S IK L +V+ G
Sbjct: 972 APTRQSAIKSALTHVMAG 989
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 919 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQSA 978
Query: 324 IRRQIGH 330
I+ + H
Sbjct: 979 IKSALTH 985
>gi|146276521|ref|YP_001166680.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17025]
gi|145554762|gb|ABP69375.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17025]
Length = 930
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 33/215 (15%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 102
P + T F D PG+FS + LA + NVV+A +T D A V + G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDAEGSPY 795
Query: 103 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 162
I RL + ++ L+G R+A RD ++V+K
Sbjct: 796 EIS---RLPRLTSMIDKTLKGEVVAREAL----------------------RDRDKVKKR 830
Query: 163 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
E + P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 831 ----ESQFRFPTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKTRQETLEKKLRQAI 921
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
>gi|77462355|ref|YP_351859.1| PII uridylyl-transferase [Rhodobacter sphaeroides 2.4.1]
gi|91206754|sp|Q3J5H6.1|GLND_RHOS4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77386773|gb|ABA77958.1| uridylyltransferase [Rhodobacter sphaeroides 2.4.1]
Length = 930
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 102
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 103 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 162
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 163 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
>gi|221638214|ref|YP_002524476.1| PII uridylyl-transferase [Rhodobacter sphaeroides KD131]
gi|221158995|gb|ACL99974.1| PII uridylyltransferase [Rhodobacter sphaeroides KD131]
Length = 930
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 102
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 103 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 162
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 163 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
>gi|126461232|ref|YP_001042346.1| PII uridylyl-transferase [Rhodobacter sphaeroides ATCC 17029]
gi|126102896|gb|ABN75574.1| metal dependent phosphohydrolase [Rhodobacter sphaeroides ATCC
17029]
Length = 930
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 87/215 (40%), Gaps = 33/215 (15%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--Y 102
P + T F D PG+FS + LA + NVV+A +T D A V S G Y
Sbjct: 736 PDRDATRACFALADHPGIFSRLAGALALVGANVVDARTYTTKDGYATAVFWIQDSEGSPY 795
Query: 103 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 162
I RL + ++ L+G R+A DRD + +A
Sbjct: 796 EI---SRLPRLTSMIDKTLKGEVVAREA--------------------LKDRDKLKKREA 832
Query: 163 VGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
R P + E YT+I + ++DRP LL+D+ TL + ++ T
Sbjct: 833 QFRF------PTHIAFDNEGSDIYTIIEVDTRDRPGLLYDLTRTLAANNIYIASAVIATY 886
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
+ FY++ + GL + + +E + + L AI
Sbjct: 887 GAQVVDSFYVKDMFGLKLHQKNRQETLEKKLRQAI 921
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR N++ I A I+T G +V D+FYV D+ G
Sbjct: 853 IEVDTRDRPGLLYDLTRTLAANNIYIASAVIATYGAQVVDSFYVKDMFG 901
>gi|407695749|ref|YP_006820537.1| protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
gi|407253087|gb|AFT70194.1| Protein-P-II uridylyltransferase [Alcanivorax dieselolei B5]
Length = 902
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ T DR GLL+ I RIF + L ++ A I+T+G +V+D F+VTD+ G+PV DP++
Sbjct: 821 VDIHTLDRPGLLAHIGRIFVQFELLVQNARIATLGERVEDVFFVTDLNGDPVSDPELCQH 880
Query: 324 IR 325
++
Sbjct: 881 LQ 882
>gi|357030239|ref|ZP_09092200.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
gi|355532907|gb|EHH02254.1| PII uridylyl-transferase [Mesorhizobium amorphae CCNWGS0123]
Length = 933
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 111
IE G DRPGL SE+ L+DL ++ +A I T ++ +VTD TG I P R++
Sbjct: 849 IEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTD-LTGQKIDSPTRMA 907
Query: 112 TIKELLFNVLRGYDDFRKAKT 132
TI + L L G R K
Sbjct: 908 TIHKRLIETLEGTAPERNGKA 928
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLLS+IT + SL I A I+T G KV DTFYVTD+TG +D P + +
Sbjct: 849 IEIEGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPTRMAT 908
Query: 324 IRRQI 328
I +++
Sbjct: 909 IHKRL 913
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 88/236 (37%), Gaps = 31/236 (13%)
Query: 28 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 87
E DA+ L + V E T I D P L S + A N+V+A+I+T +D
Sbjct: 715 EADAA-GKKLATMVKTHQFEAVTEITVLAQDHPRLLSVIAGACAGAGGNIVDAQIFTTSD 773
Query: 88 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 147
A + + +R + L+ +VL G S P
Sbjct: 774 GRALDTILISREFDLDEDERRRAERVGRLIEDVLSG--------KSWLPE---------- 815
Query: 148 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLT 206
M + R R V R+ P+ + N + ++VI + DRP LL +I L+
Sbjct: 816 --MIEKRTKPRRGAKVFRIP-----PRAEIRNTLSNRFSVIEIEGLDRPGLLSEITGALS 868
Query: 207 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERR 258
D+ + + T + FY+ + G I S +R+I+ LE R
Sbjct: 869 DLSLDIASAHITTFGEKVIDTFYVTDLTGQKIDSPTRMATIHKRLIETLEGTAPER 924
>gi|402850071|ref|ZP_10898284.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
gi|402499632|gb|EJW11331.1| [Protein-PII] uridylyltransferase [Rhodovulum sp. PH10]
Length = 938
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 40 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 99
SV + +T +E +G DRPGL E+ + L+ L+ N+ +A + T +RA V ++TD
Sbjct: 842 SVNNQWSHRYTVVEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYITD-L 900
Query: 100 TGYAIKDPKRLSTIKELLF 118
G I P R++TIK L
Sbjct: 901 MGARITSPTRIATIKRALL 919
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 81/214 (37%), Gaps = 26/214 (12%)
Query: 28 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 87
ET+A L + P T + D P L S + A N+V+A+I+T D
Sbjct: 719 ETEAKGGDPLATRYSFDPARGVTVLTVLAPDHPWLLSVIAGACASAGANIVDAQIYTTTD 778
Query: 88 RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH 147
A + +R + + L LRG E RL
Sbjct: 779 GLALDTISVSREFERDDDEGRRAGRVVDALERALRG-------------------EMRLP 819
Query: 148 QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLT 206
++M R+ A GR P+V+V N YTV+ + DRP LL+++ TL+
Sbjct: 820 EMMAAKRN------AKGRTRPFRVEPEVSVNNQWSHRYTVVEVSGLDRPGLLYELTSTLS 873
Query: 207 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISS 240
+ + V T A FYI + G I+S
Sbjct: 874 KLNLNITSAHVATFGERAVDVFYITDLMGARITS 907
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL ++T + +L+I A ++T G + D FY+TD+ G + P I +
Sbjct: 854 VEVSGLDRPGLLYELTSTLSKLNLNITSAHVATFGERAVDVFYITDLMGARITSPTRIAT 913
Query: 324 IRRQIGHTKLQVKRSTILAPKPPK 347
I+R + AP+P K
Sbjct: 914 IKRAL---------LLPFAPRPEK 928
>gi|367474181|ref|ZP_09473703.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
gi|365273525|emb|CCD86171.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 285]
Length = 931
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 13 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 72
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 73 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 125
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L D
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLLASED 924
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 95
L +VG P T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 726 LAINVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAI 785
Query: 96 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 150
+ D G +R + I E + VL G K L P + R R Q
Sbjct: 786 SREYERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ-- 829
Query: 151 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 209
KA S P+V++ N + YTVI + DRP LL+++ ++ +
Sbjct: 830 ---------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLN 874
Query: 210 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISS 240
+ V T A FY+ + G I++
Sbjct: 875 LNIASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|146337664|ref|YP_001202712.1| PII uridylyl-transferase [Bradyrhizobium sp. ORS 278]
gi|166226140|sp|A4YKP3.1|GLND_BRASO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146190470|emb|CAL74469.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 278]
Length = 931
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 13 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 72
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 73 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 125
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L D
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLLASED 924
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 95
L +VG P T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 726 LAINVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAI 785
Query: 96 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 150
+ D G +R + I E + VL G K L P + R R Q
Sbjct: 786 SREYERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ-- 829
Query: 151 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 209
KA S P+V++ N + YTVI + DRP LL+++ ++ +
Sbjct: 830 ---------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLN 874
Query: 210 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISS 240
+ V T A FY+ + G I++
Sbjct: 875 LNIASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|158421962|ref|YP_001523254.1| PII uridylyl-transferase [Azorhizobium caulinodans ORS 571]
gi|158328851|dbj|BAF86336.1| protein-P-II uridylyltransferase [Azorhizobium caulinodans ORS 571]
Length = 984
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 28 ETDASFAPSLRSSVGVMP--------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVN 79
E A P R + V P + HT +E +G DRPGL E+ L+ L+ N+ +
Sbjct: 868 EVMAKKLPKARRTFSVEPEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIAS 927
Query: 80 AEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 126
A + T +RA V +VTD G I R STI+ L V G D
Sbjct: 928 AHVATFGERAVDVFYVTD-LMGAKITGAARQSTIRRALIGVFEGSFD 973
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL ++T +L+I A ++T G + D FYVTD+ G +
Sbjct: 900 VEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVFYVTDLMGAKI 951
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
S P+VTV N + +TV+ + DRP LLF++ TL+ + + V T A F
Sbjct: 882 SVEPEVTVNNTWSNRHTVVEVSGIDRPGLLFELTNTLSRLNLNIASAHVATFGERAVDVF 941
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIE 256
Y+ + G I+ A + + + L E
Sbjct: 942 YVTDLMGAKITGAARQSTIRRALIGVFE 969
>gi|359788247|ref|ZP_09291225.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
gi|359255938|gb|EHK58828.1| PII uridylyl-transferase [Mesorhizobium alhagi CCNWXJ12-2]
Length = 935
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 111
I+ +G DRPGL SE+ L+DL ++ +A I T ++ +V+D TG I +P RL
Sbjct: 849 IDVSGLDRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSD-LTGQKIDNPARLK 907
Query: 112 TIKELLFNVLRG 123
TI++ L L+G
Sbjct: 908 TIRDRLIATLQG 919
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQI 328
DR GLLS+IT + SL I A I+T G KV DTFYV+D+TG +D P + +IR ++
Sbjct: 855 DRPGLLSEITGALSDLSLDIASAHITTFGEKVIDTFYVSDLTGQKIDNPARLKTIRDRL 913
>gi|344940504|ref|ZP_08779792.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacter tundripaludum
SV96]
gi|344261696|gb|EGW21967.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacter tundripaludum
SV96]
Length = 881
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+EL T D GLLS I R F + + + A+I+TIG + +D FY+TD P+ DP +
Sbjct: 809 IELITTDHAGLLSKIGRAFVKKDIHLHSAKITTIGSRAEDMFYITDNQSQPITDPATQEQ 868
Query: 324 IRRQI 328
IR +I
Sbjct: 869 IREEI 873
>gi|374292182|ref|YP_005039217.1| [protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
gi|357424121|emb|CBS86988.1| [Protein-PII] uridylyltransferase [Azospirillum lipoferum 4B]
Length = 954
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 38/215 (17%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPK 108
T + TD GLFS + LA ++V+A I+T N A V V D + G A +
Sbjct: 742 TEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDAAGGGAFESGD 801
Query: 109 RLSTIKELLFNVLRG----YDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEK 161
+L+ + ++ VL G +D +T+ + +R R H +++ D+
Sbjct: 802 KLAKLSVMIEKVLSGQLKPLNDLSTRRTTQA-----SRTRVFHVPPRVLIDN-------- 848
Query: 162 AVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 221
N +TVI + +DRP LL+D+ L+++ + V+T
Sbjct: 849 -----------------NASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFG 891
Query: 222 TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 256
+A FY++ V GL ++ E + ++ + L +A++
Sbjct: 892 EKAIDVFYVKDVFGLKVTHEGKLAKIKERLLSALD 926
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
HT IE G DRPGL ++ L++L + +A++ T ++A V +V D G +
Sbjct: 854 HTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVKD-VFGLKVTHEG 912
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 144
+L+ IKE L + L DD PP + R R
Sbjct: 913 KLAKIKERLLSAL---DD---PSGDAPPPATVKRTR 942
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ DR GLL D+TR +L I A++ST G K D FYV DV G
Sbjct: 857 IEVNGRDRPGLLYDLTRALSNLTLQISSAKVSTFGEKAIDVFYVKDVFG 905
>gi|261856728|ref|YP_003264011.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
gi|261837197|gb|ACX96964.1| UTP-GlnB uridylyltransferase, GlnD [Halothiobacillus neapolitanus
c2]
Length = 863
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PK 319
E+++ T+DR GLL+DIT F + +S+ A +ST+G +V+D FYV + G+ VD PK
Sbjct: 790 EIQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDAFYVVERQGHAVDSPK 846
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I+ DRPGL +++ ADL ++ +A + T +R +V + G+A+ PKR
Sbjct: 789 TEIQIITKDRPGLLADITTAFADLDISLNHARVSTLGERVEDAFYVVERQ-GHAVDSPKR 847
Query: 110 LSTIKELL 117
+ I+ L
Sbjct: 848 CAEIEAAL 855
>gi|92115857|ref|YP_575586.1| PII uridylyl-transferase [Nitrobacter hamburgensis X14]
gi|122418861|sp|Q1QRM1.1|GLND_NITHX RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91798751|gb|ABE61126.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Nitrobacter
hamburgensis X14]
Length = 931
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ HT IE +G DRPGL ++ A ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SDRHTVIEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 904
Query: 106 DPKRLSTIKELLFNVL 121
P R + IK L ++L
Sbjct: 905 APTRQAAIKRALIHLL 920
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 852 IEVSGLDRPGLLFQLTAAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTRQAA 911
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 912 IKRALIH 918
>gi|30173092|sp|Q8RQD1.1|GLND_AZOBR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|19421768|gb|AAL87737.1|AF149716_1 uridylyltransferase [Azospirillum brasilense]
Length = 933
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 30/208 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPK 108
T + TD GLFS + LA ++V+A I+T N A V V D + G A +
Sbjct: 745 TEVTIFATDHHGLFSRLAGALAAAGADIVDARIFTMTNGMALDVFTVQDAAGGGAFESGD 804
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
+L+ + ++ VL G L P LH + +R R
Sbjct: 805 KLAKLSVMIEKVLSG---------QLKP---------LHDLT------KRKAPHASRTRV 840
Query: 169 KSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P+V + N +TVI + +DRP LL+D+ LT++ + ++T +A
Sbjct: 841 FHVPPRVLIDNNASTTHTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDV 900
Query: 228 FYIRHVDGLPISSEAE----RERVIQCL 251
FY++ V GL ++ E + RER++ L
Sbjct: 901 FYVKDVFGLKVTHENKLAQIRERLLHAL 928
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
HT IE G DRPGL ++ L +L + +A+I T+ ++A V +V D G +
Sbjct: 857 HTVIEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKD-VFGLKVTHEN 915
Query: 109 RLSTIKELLFNVL 121
+L+ I+E L + L
Sbjct: 916 KLAQIRERLLHAL 928
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ DR GLL D+TR +L I A+IST G K D FYV DV G
Sbjct: 860 IEVNGRDRPGLLYDLTRALTNLTLQISSAKISTYGEKAIDVFYVKDVFG 908
>gi|148258814|ref|YP_001243399.1| PII uridylyl-transferase [Bradyrhizobium sp. BTAi1]
gi|166226139|sp|A5ETJ9.1|GLND_BRASB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|146410987|gb|ABQ39493.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. BTAi1]
Length = 931
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 13 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 72
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 73 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 95
L +VG P T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 726 LAINVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAI 785
Query: 96 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 150
+ D G +R + I E + VL G K L P + R R Q
Sbjct: 786 SREYERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ-- 829
Query: 151 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 209
KA S P+V++ N + YTVI + DRP LL+++ ++ +
Sbjct: 830 ---------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLN 874
Query: 210 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISS 240
+ V T A FY+ + G I++
Sbjct: 875 LNIASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|338999274|ref|ZP_08637924.1| PII uridylyl-transferase [Halomonas sp. TD01]
gi|338763838|gb|EGP18820.1| PII uridylyl-transferase [Halomonas sp. TD01]
Length = 891
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 259 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 317
A+E LEL DR GLL+ + RIF E +++ A+I+T+G +V+D F++T G P+ D
Sbjct: 815 ANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITTKAGEPLTD 874
Query: 318 PKIIDSIRRQI 328
P+ +R ++
Sbjct: 875 PERQQQLRERL 885
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 20/140 (14%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD-----------------ASFAPSLRSSV 41
++ F V+D G+ IRD E I+ +++ L E D F +
Sbjct: 751 LNTFIVLDHYGQPIRDPEHIEEMRRHLVEELDDPDDYPEIVTRHTPRQLKHFKVPTEVVI 810
Query: 42 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
P E T +E T DRPGL + V + + + A+I T +R V +T G
Sbjct: 811 EQDPANERTLLELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITT-KAG 869
Query: 102 YAIKDPKRLSTIKELLFNVL 121
+ DP+R ++E L VL
Sbjct: 870 EPLTDPERQQQLRERLIEVL 889
>gi|99080287|ref|YP_612441.1| PII uridylyl-transferase [Ruegeria sp. TM1040]
gi|99036567|gb|ABF63179.1| UTP-GlnB uridylyltransferase GlnD [Ruegeria sp. TM1040]
Length = 893
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 34/241 (14%)
Query: 20 IDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIE--FTGTDRPGLFSEVCAVLADLHCNV 77
+D+ + E DA PS V + P E+ + F D PG+F+ + LA + NV
Sbjct: 673 VDFAEMLREIDALDDPSA-MLVRLHPDEDRDATRACFVMPDHPGIFARIAGALALVGANV 731
Query: 78 VNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPP 137
V+A +T D + G+ + RL ++ ++ LRG R A S
Sbjct: 732 VDARSYTTKDGFVTDAFWIQDADGHPF-EASRLPRLRSMIEKTLRGEVIARDALKSRDK- 789
Query: 138 GIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDR 194
I RER I FD+ D S YT+I + ++DR
Sbjct: 790 -IKKRERAFRVPTHITFDN--------------DGSD-----------IYTIIEVDTRDR 823
Query: 195 PKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA 254
P LL+D+ TL + + ++ T + FY++ + GL S ++++ + + L A
Sbjct: 824 PGLLYDLARTLAASNVYIANAVIATYGEQVVDSFYVKDMFGLKYHSASKQQSLEKKLREA 883
Query: 255 I 255
I
Sbjct: 884 I 884
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R +++ I A I+T G +V D+FYV D+ G
Sbjct: 816 IEVDTRDRPGLLYDLARTLAASNVYIANAVIATYGEQVVDSFYVKDMFG 864
>gi|409426404|ref|ZP_11260959.1| PII uridylyl-transferase [Pseudomonas sp. HYS]
Length = 899
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 816 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDADNLPLSDPQLCSR 875
Query: 324 IRRQIGHTKLQVKRST 339
++ I +L+V ++T
Sbjct: 876 LQDAIVE-QLRVDQAT 890
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 25/144 (17%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG K+IRD + DY IQ+R+ +FAP +
Sbjct: 745 LDTYIVLDNDGDSIGDNPVRVKQIRDGLTDALRNPDDYPTIIQRRVPRQLKHFTFAPQV- 803
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ T +E + DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 804 -TIHNDAQRPVTILELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITD- 861
Query: 99 STGYAIKDPKRLSTIKELLFNVLR 122
+ + DP+ S +++ + LR
Sbjct: 862 ADNLPLSDPQLCSRLQDAIVEQLR 885
>gi|422404700|ref|ZP_16481751.1| PII uridylyl-transferase, partial [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330878198|gb|EGH12347.1| PII uridylyl-transferase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 118
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/65 (41%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD +P+ DP++
Sbjct: 36 LELLAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPQLCSQ 95
Query: 324 IRRQI 328
++ I
Sbjct: 96 LQDAI 100
>gi|386399179|ref|ZP_10083957.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
gi|385739805|gb|EIG60001.1| (protein-PII) uridylyltransferase [Bradyrhizobium sp. WSM1253]
Length = 929
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 106 DPKRLSTIKELLFNVLRG 123
P R + IK L +V+ G
Sbjct: 904 APTRQAAIKSALTHVMAG 921
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 39/198 (19%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 103
T + D P L S + A N+V+A+I+T D RA + ++ D G
Sbjct: 739 TELTIFAADHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISISREYDRDEDEG-- 796
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
+R + I E++ +VL G L P ++ R
Sbjct: 797 ----RRATRIGEMIEDVLEG---------KLRLPEVVARR-----------------TVR 826
Query: 164 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
G+ P+VT+ N D YTVI M DRP LL+++ ++ + + V T
Sbjct: 827 GKARPFVIEPEVTINNQWSDRYTVIEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGE 886
Query: 223 EAYQEFYIRHVDGLPISS 240
A FY+ + G IS+
Sbjct: 887 RARDVFYVTDLLGAQISA 904
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 851 IEMSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQISAPTRQAA 910
Query: 324 IRRQIGH 330
I+ + H
Sbjct: 911 IKSALTH 917
>gi|229588801|ref|YP_002870920.1| PII uridylyl-transferase [Pseudomonas fluorescens SBW25]
gi|259492003|sp|C3K5E4.1|GLND_PSEFS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|229360667|emb|CAY47525.1| uridylyltransferase [Pseudomonas fluorescens SBW25]
Length = 900
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 53/84 (63%), Gaps = 8/84 (9%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 322 --DSIRRQIGHTK---LQVKRSTI 340
D+I +Q+ T+ +++ R TI
Sbjct: 877 LQDAIVQQLSVTQEPGVELTRLTI 900
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 86/227 (37%), Gaps = 33/227 (14%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPVRVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCT 269
F+I D P+S R+ + + G+EL T
Sbjct: 853 RVEDVFFITDADNQPLSDPELCRRLQDAIVQQLSVTQEPGVELTRLT 899
>gi|365884301|ref|ZP_09423359.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
gi|365287146|emb|CCD95890.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
ORS 375]
Length = 931
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 13 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 72
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 73 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 95
L +VG P T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 726 LAINVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAI 785
Query: 96 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 150
+ D G +R + I E + VL G K L P + R R Q
Sbjct: 786 SREYERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ-- 829
Query: 151 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 209
KA S P+V++ N + YTVI + DRP LL+++ ++ +
Sbjct: 830 ---------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLN 874
Query: 210 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISS 240
+ V T A FY+ + G I++
Sbjct: 875 LNIASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|170740425|ref|YP_001769080.1| PII uridylyl-transferase [Methylobacterium sp. 4-46]
gi|168194699|gb|ACA16646.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium sp. 4-46]
Length = 936
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 9/105 (8%)
Query: 34 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 93
AP L S+ + T +E +G DRPGL ++ L+ L+ N+ +A + T +RA V
Sbjct: 821 APDL--SIDNALSSRETVLEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVF 878
Query: 94 HVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPG 138
+VTD TG I P R +TI+ + V G D A+ PPG
Sbjct: 879 YVTD-LTGTKITQPDRQATIRRAVMGVFEG--DAAAAR----PPG 916
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL D+T +L+I A ++T G + D FYVTD+TG + P +
Sbjct: 837 LEISGLDRPGLLYDLTTALSRLNLNITSAHVATFGERAVDVFYVTDLTGTKITQPDRQAT 896
Query: 324 IRRQIGHTKLQVKRSTILAPKPP 346
IRR + + V A +PP
Sbjct: 897 IRRAV----MGVFEGDAAAARPP 915
>gi|365892864|ref|ZP_09431099.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
gi|365331013|emb|CCE03630.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3809]
Length = 931
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 13 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 72
K+R + + R + +F+ S+ +E +T IE +G DRPGL E+ ++
Sbjct: 813 KLRLPDAVARRTTRGKQHKAFSVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISK 872
Query: 73 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
L+ N+ +A + T +RA V +VTD G I P R + IK L ++L
Sbjct: 873 LNLNIASAHVATFGERARDVFYVTD-LLGAQINAPTRQAAIKSALLHLL 920
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 95
L +VG P T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 726 LAINVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAI 785
Query: 96 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 150
+ D G +R + I E + VL G K L P + R R Q
Sbjct: 786 SREYERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ-- 829
Query: 151 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 209
KA S P+V++ N + YTVI + DRP LL+++ ++ +
Sbjct: 830 ---------HKAF------SVEPEVSINNQWSELYTVIEVSGLDRPGLLYELTTAISKLN 874
Query: 210 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISS 240
+ V T A FY+ + G I++
Sbjct: 875 LNIASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|92112694|ref|YP_572622.1| PII uridylyl-transferase [Chromohalobacter salexigens DSM 3043]
gi|91795784|gb|ABE57923.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Chromohalobacter
salexigens DSM 3043]
Length = 891
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+EL DR GLL+ + RIF E +++ A+I+T+G +V+D F++TD G P+ DP+
Sbjct: 821 VELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITDKAGEPLTDPERQAR 880
Query: 324 IRRQIGHT 331
+R ++ T
Sbjct: 881 LRERLCET 888
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 20/140 (14%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL--ETD-----------------ASFAPSLRSSV 41
++ F V+D DG+ IRD + ++ I+ L E D F R +
Sbjct: 751 LNTFIVLDDDGEPIRDPQRLEEIRHHLVEELDDPADYPRIVTRHTSRQLKHFKVPTRVVI 810
Query: 42 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
T +E T DRPGL + V + + + A+I T +R V +TD G
Sbjct: 811 EQDTANARTIVELTAPDRPGLLARVGRIFMEQDIALSAAKIATLGERVEDVFFITD-KAG 869
Query: 102 YAIKDPKRLSTIKELLFNVL 121
+ DP+R + ++E L L
Sbjct: 870 EPLTDPERQARLRERLCETL 889
>gi|52425360|ref|YP_088497.1| PII uridylyl-transferase [Mannheimia succiniciproducens MBEL55E]
gi|81170622|sp|Q65SZ8.1|GLND_MANSM RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|52307412|gb|AAU37912.1| GlnD protein [Mannheimia succiniciproducens MBEL55E]
Length = 875
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 81/184 (44%), Gaps = 41/184 (22%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 243
T + + KDRP L +V + + + + + T A+ F + +DG + + +
Sbjct: 699 TEVFIYCKDRPNLFLKVVAAIGNKKLSIHDAQIITSLDGYAFDSFIVTELDGSLL--KFD 756
Query: 244 RERVIQCLEAAIERRASEGL-------------------------------ELELCTEDR 272
R RV++ +A I S L E+EL T D+
Sbjct: 757 RRRVLE--KAIINSLNSNELTKLQGSENHKLQHFNVKTEVRFLNTEKTTHTEMELFTLDK 814
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTK 332
GLL+D++ +F E +LSI+ A+I+TIG K +D F +T+ G + + RQ K
Sbjct: 815 AGLLADVSLVFSELNLSIQNAKITTIGEKAQDFFILTNAKGEALSER-----ERQSLSEK 869
Query: 333 LQVK 336
LQ +
Sbjct: 870 LQAR 873
>gi|163744702|ref|ZP_02152062.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
gi|161381520|gb|EDQ05929.1| PII uridylyl-transferase [Oceanibulbus indolifex HEL-45]
Length = 940
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 37/220 (16%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T F D PG+F+ + LA + NVV+A +T D S G A + R
Sbjct: 751 TRASFVMADHPGIFARLAGALALVGANVVDARSYTTKDGFVTDAFWIQDSEGNAY-EASR 809
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRV 166
L +++ + LRG R A S + RER I FD+ E
Sbjct: 810 LPRLRDTIEKTLRGEIVARDALKSRDK--VKKRERAFKVPTHITFDNEGSE--------- 858
Query: 167 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
YT+I + ++DRP LL+D+ TL + + ++ T +
Sbjct: 859 ----------------IYTIIEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVD 902
Query: 227 EFYIRHVDGLPISSEAER----ERVIQCLEAAIERRASEG 262
FY++ + GL +EA++ +R+ + + A ++R +EG
Sbjct: 903 TFYVKDMFGLKYYTEAKQRTLEKRLREAIVAGVQR--AEG 940
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR +++ I A I+T G +V DTFYV D+ G
Sbjct: 863 IEVDTRDRPGLLYDLTRTLAASNVYIANAVIATFGEQVVDTFYVKDMFG 911
>gi|429330794|ref|ZP_19211576.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
gi|428764574|gb|EKX86707.1| PII uridylyl-transferase [Pseudomonas putida CSV86]
Length = 900
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF + LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQDAI 881
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 80/197 (40%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH-VTDHSTGYAIK 105
E T I D+ F+ A + L+ N+ +A I T + + + V D+ G
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGGSIGN 761
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
+P+R+ I++ L + LR DD+ P I++R R+L F
Sbjct: 762 NPQRVKQIRDGLSDALRNPDDY---------PSIIHRRVPRQLKHFAFP----------- 801
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+LN ++ T++ + + DRP LL I D + + + T
Sbjct: 802 ---------PQVTILNDAQRPVTILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 6/84 (7%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E DRPGL + + + D ++ NA+I T +R V +TD + + DP+
Sbjct: 815 TILELIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFITD-ADNQPLSDPQL 873
Query: 110 LSTIKELLFNVLR-----GYDDFR 128
S +++ + LR G + FR
Sbjct: 874 CSRLQDAIVEQLRVDQASGTESFR 897
>gi|402699411|ref|ZP_10847390.1| PII uridylyl-transferase [Pseudomonas fragi A22]
Length = 900
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGMIFLEFDLSLQNAKIATLGERVEDVFFVTDENNQPLSDPQL 873
>gi|357160225|ref|XP_003578696.1| PREDICTED: uncharacterized protein LOC100833127 [Brachypodium
distachyon]
Length = 421
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 19/151 (12%)
Query: 179 NIEKDYTVITMRSKD---------RPKLLFDIVCTLTDMQ------YVVFHGMVNTGRTE 223
++ D TV+T+ D R LLF + DM Y+V + GRT
Sbjct: 15 DVAGDPTVVTISCPDKTGLGCDLCRVVLLFGLNVLKGDMSTDGRWCYIVLWVVARRGRTM 74
Query: 224 AYQEFYIRHVDGLPISSEAERER---VIQCLEAAIERRASEGLELELCTEDRVGLLSDIT 280
A+ R V+ P+SS + L+ +E A L+ DR+GLL D+T
Sbjct: 75 AWDLLKERLVELCPVSSLCGLDSSYLAAAGLQEDLEPAAPRVFLLKFSCYDRMGLLHDVT 134
Query: 281 RIFRENSLSIKRAEISTI-GGKVKDTFYVTD 310
+ E L+I+R ++ST G+V D F++TD
Sbjct: 135 HVLSEMELTIRRVKVSTTPDGRVMDLFFITD 165
>gi|329893768|ref|ZP_08269856.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
gi|328923491|gb|EGG30805.1| [Protein-PII] uridylyltransferase [gamma proteobacterium IMCC3088]
Length = 891
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 253 AAIERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 311
A I + +GL LE+ + DR GLL+ + R+F E + I+ A+I T+G +V+D F++TD
Sbjct: 802 AQITQDHDKGLSILEVISPDRPGLLARLGRVFVEFGIEIQTAKIQTLGERVEDLFFITDA 861
Query: 312 TGNPV-DPKIIDSIRRQI 328
NP+ DP + I I
Sbjct: 862 QQNPITDPDLCQQIEAAI 879
>gi|317152370|ref|YP_004120418.1| protein-P-II uridylyltransferase [Desulfovibrio aespoeensis Aspo-2]
gi|316942621|gb|ADU61672.1| protein-P-II uridylyltransferase [Desulfovibrio aespoeensis Aspo-2]
Length = 873
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR+G L D+ R + LSI A+I+TI G+ D F+V D TG + DP+ I++
Sbjct: 802 VEVAAPDRIGFLHDMARTLSGHGLSIHIAKITTIKGRAADIFHVRDHTGAKLTDPERIET 861
Query: 324 IRRQIGHT 331
+RR + H
Sbjct: 862 LRRDLLHA 869
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 3/89 (3%)
Query: 34 APSLRSSVGV--MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
AP LR V V ++ T +E DR G ++ L+ ++ A+I T RAA
Sbjct: 782 APRLRPIVTVDNQGSDFFTLVEVAAPDRIGFLHDMARTLSGHGLSIHIAKITTIKGRAAD 841
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
+ HV DH TG + DP+R+ T++ L +
Sbjct: 842 IFHVRDH-TGAKLTDPERIETLRRDLLHA 869
>gi|388471183|ref|ZP_10145392.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
gi|388007880|gb|EIK69146.1| protein-P-II uridylyltransferase [Pseudomonas synxantha BG33R]
Length = 900
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 8/84 (9%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKII-- 321
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 322 --DSIRRQIGHTK---LQVKRSTI 340
D+I Q+ T+ +++ R TI
Sbjct: 877 LQDAIVEQLSVTQEPGVELTRLTI 900
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 86/227 (37%), Gaps = 33/227 (14%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCT 269
F+I D P+S R+ + + G+EL T
Sbjct: 853 RVEDVFFITDADNQPLSDPELCRRLQDAIVEQLSVTQEPGVELTRLT 899
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 27/131 (20%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG KKIR+ + DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDTDGDSIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVT 805
Query: 39 -SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
S+ P T +E + DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 806 ISNDAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD 862
Query: 98 HSTGYAIKDPK 108
+ + DP+
Sbjct: 863 -ADNQPLSDPE 872
>gi|254488051|ref|ZP_05101256.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
gi|214044920|gb|EEB85558.1| protein-P-II uridylyltransferase [Roseobacter sp. GAI101]
Length = 928
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 37/212 (17%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F TD PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 743 FVMTDHPGIFARLAGALALVGANVVDARSYTTKDGYVTGAFWIQDADGNPY-DIARLPRL 801
Query: 114 KELLFNVLRGYDDFRKAKTSL-SPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDK 169
++++ L+G KA+ L S + RE+ I FD+ E
Sbjct: 802 RQMIGKTLKGEI---KAREELKSRDKVKKREKAFRVPTHITFDNEGSE------------ 846
Query: 170 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 229
YT+I + ++DRP LL+D+ +L + + + ++ T + FY
Sbjct: 847 -------------IYTIIEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFY 893
Query: 230 IRHVDGLPISSEAER----ERVIQCLEAAIER 257
++ + GL SE+++ +R+ + A +ER
Sbjct: 894 VKDMFGLKYYSESKQKTLEKRLRTAIAAGVER 925
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R E+++ I A I+T G +V DTFYV D+ G
Sbjct: 851 IEVDTRDRPGLLYDLARSLAESNVYIANAVIATYGEQVVDTFYVKDMFG 899
>gi|254785172|ref|YP_003072600.1| PII uridylyl-transferase [Teredinibacter turnerae T7901]
gi|237686077|gb|ACR13341.1| protein-P-II uridylyltransferase [Teredinibacter turnerae T7901]
Length = 905
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ + DR GLL+ I ++F E+ + ++ A+IST+G +V+D F++TD P+ DP++ +
Sbjct: 827 LEVISPDRPGLLATIGQVFMEHDVQLQNAKISTLGERVEDVFFITDADNQPLGDPRLCRA 886
Query: 324 IRRQI 328
++ I
Sbjct: 887 LQDDI 891
>gi|407972980|ref|ZP_11153893.1| PII uridylyl-transferase [Nitratireductor indicus C115]
gi|407431751|gb|EKF44422.1| PII uridylyl-transferase [Nitratireductor indicus C115]
Length = 932
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDSIRRQIG 329
DR GLLS++T + SL I A I+T G KV DTFYVTD+TG V P +D+I R +
Sbjct: 853 DRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTFYVTDLTGQKIVSPDRLDAICRALL 912
Query: 330 HT 331
T
Sbjct: 913 ET 914
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R +G + + +E G DRPGL SE+ L+DL ++ +A I T ++
Sbjct: 827 AFRVEPRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVID 886
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD TG I P RL I L L
Sbjct: 887 TFYVTD-LTGQKIVSPDRLDAICRALLETL 915
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 30/215 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + D P L S + + N+V+A+I+T A + + + +R
Sbjct: 734 TEVTVFAPDHPRLLSVIAGACSAAGANIVDAQIFTTTHGRALDTILIGREFDFDEDERRR 793
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
I L+ +VL G KT L P I+ + R R RVE
Sbjct: 794 AERIGRLIEDVLSG-------KTYL--PEIIEKRAR-----------PRRSTRAFRVE-- 831
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P+V + N + ++V+ ++ DRP LL ++ TL+D+ + + T + F
Sbjct: 832 ---PRVEIGNALSNRFSVVEIKGLDRPGLLSELTETLSDLSLDIASAHITTFGEKVIDTF 888
Query: 229 YIRHVDGLPISS----EAERERVIQCLEAAIERRA 259
Y+ + G I S +A +++ LE ++R A
Sbjct: 889 YVTDLTGQKIVSPDRLDAICRALLETLEHGVQRPA 923
>gi|90415791|ref|ZP_01223724.1| protein-PII uridylyltransferase [gamma proteobacterium HTCC2207]
gi|90332165|gb|EAS47362.1| protein-PII uridylyltransferase [gamma proteobacterium HTCC2207]
Length = 904
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 32/164 (19%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 243
T I + SKDR I L + + +N+ A+ FY+ PI +
Sbjct: 704 TQIFVHSKDRANNFSIIASALDRLNLNIHDARLNSNSDGSAFDVFYVLDEQDQPIGQDRL 763
Query: 244 R-ERVIQCLEAAI----------ERRASEGLE--------------------LELCTEDR 272
R E+++Q L AI ++R L+ LE+ T DR
Sbjct: 764 RCEKIVQTLSGAIADPSKINAYVQQRTPRQLKNFALKTTAKLRHDVDANCVILEIITPDR 823
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
GLL+ +T+IF L + A+IST+G +V+D FY+TD P+
Sbjct: 824 PGLLAHLTQIFVRFELRVLHAKISTLGERVEDIFYLTDKNFEPL 867
>gi|395794807|ref|ZP_10474124.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
gi|395341076|gb|EJF72900.1| PII uridylyl-transferase [Pseudomonas sp. Ag1]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQEAI 881
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 33/223 (14%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L + LR DD+ P I+ R R+L F
Sbjct: 762 NPERVKKIRKGLTDALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+VT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL 265
F+I D P+S R+ + + + G+E+
Sbjct: 853 RVEDVFFITDADNQPLSDPELCRRLQEAIVQQLSVNQETGVEM 895
>gi|421143790|ref|ZP_15603722.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
gi|404505051|gb|EKA19089.1| PII uridylyl-transferase [Pseudomonas fluorescens BBc6R8]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQEAI 881
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 33/223 (14%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L + LR DD+ P I+ R R+L F
Sbjct: 762 NPERVKKIRKGLTDALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+VT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL 265
F+I D P+S R+ + + + G+E+
Sbjct: 853 RVEDVFFITDADNQPLSDPELCRRLQEAIVQQLSVNQETGVEM 895
>gi|374703800|ref|ZP_09710670.1| PII uridylyl-transferase [Pseudomonas sp. S9]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+EL DR GLL+ + RIF + LSI+ A+I+T+G +V+D F+VTD + DP++
Sbjct: 817 IELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVTDANNQQLSDPELCTR 876
Query: 324 IRRQIGHTKLQVKRSTILAPKPPKET 349
++ I Q+ ++ L +P K T
Sbjct: 877 LQETIVS---QLSDASTLGAEPSKIT 899
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE T DRPGL + V + D ++ NA+I T +R V VTD + + DP+
Sbjct: 815 TVIELTAPDRPGLLARVGRIFLDFDLSIQNAKIATLGERVEDVFFVTD-ANNQQLSDPEL 873
Query: 110 LSTIKELLFNVL 121
+ ++E + + L
Sbjct: 874 CTRLQETIVSQL 885
>gi|398892828|ref|ZP_10645783.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
gi|398184929|gb|EJM72355.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM55]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD +P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG K+IRD + DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDTDGDSIGDNPARIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ + T +E T DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + + DP S +++ + L
Sbjct: 863 ANNHPLSDPLLCSRLQDAIVEQL 885
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSTSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPARIKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNHPLS 869
>gi|421595977|ref|ZP_16039900.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
gi|404271916|gb|EJZ35673.1| PII uridylyl-transferase, partial [Bradyrhizobium sp. CCGE-LA001]
Length = 534
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 450 SDRYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 508
Query: 106 DPKRLSTIKELLFNVLRG 123
P R + IK L +V+ G
Sbjct: 509 APTRQAAIKSALTHVMAG 526
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++ P +
Sbjct: 456 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQINAPTRQAA 515
Query: 324 IRRQIGH 330
I+ + H
Sbjct: 516 IKSALTH 522
>gi|398930982|ref|ZP_10664913.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
gi|398164505|gb|EJM52641.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM48]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD +P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNHPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG K+IRD + DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDADGDSIGDNPARTKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ + T +E T DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + + DP S +++ + L
Sbjct: 863 ANNHPLSDPLLCSRLQDAIVEQL 885
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPARTKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNHPLS 869
>gi|387892452|ref|YP_006322749.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
gi|387162642|gb|AFJ57841.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens A506]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPQL 873
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
>gi|395500382|ref|ZP_10431961.1| PII uridylyl-transferase [Pseudomonas sp. PAMC 25886]
Length = 900
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQEAI 881
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 88/223 (39%), Gaps = 33/223 (14%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P+R+ I++ L + LR DD+ P I+ R R+L F
Sbjct: 762 NPERVKKIRKGLTDALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+VT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APEVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLEL 265
F+I D P+S R+ + + + G+E+
Sbjct: 853 RVEDVFFITDADNQPLSDPELCRRLQEAIVQQLSVNQETGVEM 895
>gi|399003066|ref|ZP_10705737.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
gi|398123470|gb|EJM13019.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM18]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I++ L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|398843542|ref|ZP_10600681.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
gi|398102080|gb|EJL92269.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM102]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|456358634|dbj|BAM93079.1| Uridylyl-removing enzyme [Agromonas oligotrophica S58]
Length = 931
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+E +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SELYTVIEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIN 904
Query: 106 DPKRLSTIKELLFNVLRGYD 125
P R + IK L ++L D
Sbjct: 905 APTRQAAIKSALLHLLASDD 924
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 84/211 (39%), Gaps = 38/211 (18%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 95
L +VG P T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 726 LAINVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAI 785
Query: 96 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 150
+ D G +R + I E + VL G K L P + R R Q
Sbjct: 786 SREYERDEDEG------RRATRIGETIEQVLEG-------KLRL-PDAVARRTTRGKQ-- 829
Query: 151 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 209
KA S P+VT+ N + YTVI + DRP LL+++ ++ +
Sbjct: 830 ---------HKAF------SVEPEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLN 874
Query: 210 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISS 240
+ V T A FY+ + G I++
Sbjct: 875 LNIASAHVATFGERARDVFYVTDLLGAQINA 905
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G ++
Sbjct: 852 IEVSGLDRPGLLYELTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQIN 904
>gi|398877479|ref|ZP_10632624.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
gi|398202374|gb|EJM89220.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM67]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|398858407|ref|ZP_10614097.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
gi|398239133|gb|EJN24848.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM79]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|398907733|ref|ZP_10654028.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
gi|398171049|gb|EJM58964.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM50]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|407366174|ref|ZP_11112706.1| PII uridylyl-transferase [Pseudomonas mandelii JR-1]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCTR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|39996919|ref|NP_952870.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|409912341|ref|YP_006890806.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
gi|39983807|gb|AAR35197.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens PCA]
gi|298505932|gb|ADI84655.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter sulfurreducens KN400]
Length = 902
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 87/200 (43%), Gaps = 22/200 (11%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
D PGLFS + V+A N++ A+I T ++ + + G+ I + R S + E L
Sbjct: 723 DIPGLFSMITGVMAANGINILGAQIHTSSNGKVLDILQVNSPQGFMIIEESRWSRVDEDL 782
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 177
VL G R A + R+R + +R R V + SS
Sbjct: 783 RQVLTG--KIRVASL------VAKRQR---PTLLTERPKPRFPSRVDIDNEVSS------ 825
Query: 178 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 237
DYTVI + + D+ LL+ I TLTD+ + ++T + FY++ + G
Sbjct: 826 -----DYTVIDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVKDIFGHK 880
Query: 238 ISSEAERERVIQCLEAAIER 257
I+S E + + L A+E+
Sbjct: 881 ITSVERLEEIREKLRVAVEQ 900
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+++ T D+VGLL IT + L I A+IST +V D FYV D+ G+ +
Sbjct: 830 IDIYTHDKVGLLYRITSTLTDLGLYIGIAKISTKVDQVADVFYVKDIFGHKI 881
>gi|398917470|ref|ZP_10658173.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
gi|398172864|gb|EJM60716.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM49]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A I T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I++ L LR D++ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDNY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 62/143 (43%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLR 38
+D + V+D DG I D K++ D IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDADGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ T +E T DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRPVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + DP S +++ + L
Sbjct: 863 ANNQPLSDPLLCSRLQDAIVEQL 885
>gi|398936503|ref|ZP_10667004.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
gi|398167815|gb|EJM55852.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM41(2012)]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPTRVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|312959390|ref|ZP_07773907.1| uridylyltransferase [Pseudomonas fluorescens WH6]
gi|311286107|gb|EFQ64671.1| uridylyltransferase [Pseudomonas fluorescens WH6]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPEL 873
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 87/227 (38%), Gaps = 33/227 (14%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCT 269
F+I D P+S R+ + + + G+EL T
Sbjct: 853 RVEDVFFITDADNQPLSDPELCLRLQEAIVQQLSVTQEPGVELTRLT 899
>gi|126739156|ref|ZP_01754850.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
gi|126719773|gb|EBA16481.1| PII uridylyl-transferase [Roseobacter sp. SK209-2-6]
Length = 913
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 42/249 (16%)
Query: 20 IDYIQQRLETDASFAPSLRSSVGVM----PTEEHTSIE--FTGTDRPGLFSEVCAVLADL 73
ID+ + E DA P GV+ P E+ + FT D PG+F+ V LA +
Sbjct: 693 IDFAEMLRELDAKNDPG-----GVVIRLDPDEDRDATRACFTMWDHPGIFARVSGALALV 747
Query: 74 HCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTS 133
NVV+A +T D + G+ + RL + +++ L+G R A S
Sbjct: 748 GANVVDARSYTTKDGYVTDAFWIQDAEGHPF-EASRLKRLSQMIRKTLKGEVIARDALVS 806
Query: 134 LSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMR 190
I RE+ I FD+ E YT+I +
Sbjct: 807 RDK--IKKREKAFRVPTHITFDNEGSE-------------------------IYTIIEVD 839
Query: 191 SKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQC 250
++DRP LL+D+ +L + + ++ T + FY++ + GL S ++++ + +
Sbjct: 840 TRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYVKDMFGLKYHSLSKQKTLEKR 899
Query: 251 LEAAIERRA 259
L AI A
Sbjct: 900 LREAISEGA 908
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R ++ I A I+T G +V DTFYV D+ G
Sbjct: 836 IEVDTRDRPGLLYDLARSLASANVYIANAVIATYGEQVVDTFYVKDMFG 884
>gi|423690335|ref|ZP_17664855.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
gi|388002188|gb|EIK63517.1| protein-P-II uridylyltransferase [Pseudomonas fluorescens SS101]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPEL 873
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
>gi|398873974|ref|ZP_10629217.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
gi|398197674|gb|EJM84649.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM74]
Length = 900
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDGKKIRDK------------EVI----DY---IQQRLETDA---SFAPSLR 38
+D + V+D DG I D E + DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDTDGDSIGDNPARVKQIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ + T +E T DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + DP S +++ + L
Sbjct: 863 ANNQPLSDPLLCSRLQDAIVEQL 885
>gi|398881660|ref|ZP_10636645.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
gi|398200795|gb|EJM87697.1| UTP:GlnB (protein PII) uridylyltransferase, partial [Pseudomonas
sp. GM60]
Length = 216
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 133 LELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 192
Query: 320 IIDSIRRQIG 329
+ D+I Q+
Sbjct: 193 LQDAIVEQLS 202
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 18 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 77
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR--ERRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 78 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 116
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 117 --------APQVTIHNDAQRPVTVLELSAPDRPGLLARIGTIFLEFDLSLQNAKIATLGE 168
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 169 RVEDVFFITDANNQPLS 185
>gi|395648131|ref|ZP_10435981.1| PII uridylyl-transferase [Pseudomonas extremaustralis 14-3 substr.
14-3b]
Length = 900
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ + IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 817 LELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPELCRR 876
Query: 324 IRRQIGHTKLQVKRSTILAP 343
++ I +L V + + + P
Sbjct: 877 LQEAIVQ-QLSVNQESGVEP 895
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTEGESIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKKIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 801 --------APQVTISNDAQRPVTVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I D P+S
Sbjct: 853 RVEDVFFITDADNQPLS 869
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 27/144 (18%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D +G KKIR+ + DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDTEGESIGDNPARVKKIREGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQVT 805
Query: 39 -SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
S+ P T +E + DRPGL + V + + ++ NA+I T +R V +TD
Sbjct: 806 ISNDAQRPV---TVLELSAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITD 862
Query: 98 HSTGYAIKDPKRLSTIKELLFNVL 121
+ + DP+ ++E + L
Sbjct: 863 -ADNQPLSDPELCRRLQEAIVQQL 885
>gi|365895650|ref|ZP_09433753.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
gi|365423576|emb|CCE06295.1| (Protein-PII) uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Bradyrhizobium sp.
STM 3843]
Length = 930
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+E +T IE +G DRPGL E+ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 845 SELYTVIEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVTD-LLGAQIS 903
Query: 106 DPKRLSTIKELLFNVL 121
P R + IK L ++L
Sbjct: 904 APTRQAAIKSTLLHLL 919
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 79/205 (38%), Gaps = 26/205 (12%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 96
L +VG P T + D P L S + A N+V+A+I+T D A
Sbjct: 725 LAINVGFDPARGVTELTIFAMDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAI 784
Query: 97 DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 156
+ +R + I E + VL G K L P + R R Q
Sbjct: 785 SREYERDEDEARRATRIGETIEQVLEG-------KLKL-PDAVARRTTRGKQ-------- 828
Query: 157 ERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 215
KA S P+VT+ N + YTVI + DRP LL+++ ++ + +
Sbjct: 829 ---HKAF------SVEPEVTINNQWSELYTVIEVSGLDRPGLLYELTTAISKLNLNITSA 879
Query: 216 MVNTGRTEAYQEFYIRHVDGLPISS 240
V T A FY+ + G IS+
Sbjct: 880 HVATFGERARDVFYVTDLLGAQISA 904
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL ++T + +L+I A ++T G + +D FYVTD+ G +
Sbjct: 851 IEVSGLDRPGLLYELTTAISKLNLNITSAHVATFGERARDVFYVTDLLGAQI 902
>gi|331006419|ref|ZP_08329722.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
gi|330419719|gb|EGG94082.1| (Protein-PII) uridylyltransferase [gamma proteobacterium IMCC1989]
Length = 905
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ + DR G L+ + RI E ++ + A+I+T+G +V+D F++TD GNP+ DP + +
Sbjct: 824 LEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITDADGNPLSDPALCEQ 883
Query: 324 IRRQIGHTKLQVK 336
++ I T+L K
Sbjct: 884 LQHAIC-TQLDAK 895
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 58/127 (45%), Gaps = 21/127 (16%)
Query: 1 MDVFNVIDCDGKKI-RDKEVI------------------DYIQQRLETDAS-FAPSLRSS 40
MD F V+D D I ++ E++ D I++R+ F+ R+S
Sbjct: 753 MDTFYVLDQDDLPIGQNPEIVTQIIDLLLEEFSIADKYSDIIKRRIPRQLKYFSAPTRTS 812
Query: 41 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 100
+ + E+T +E DRPG + + +L + + +V A+I T +R + +TD +
Sbjct: 813 IHNDISNEYTVLEVISPDRPGFLARLARILVEYNIELVTAKITTLGERVEDIFFITD-AD 871
Query: 101 GYAIKDP 107
G + DP
Sbjct: 872 GNPLSDP 878
>gi|408373493|ref|ZP_11171189.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
gi|407766661|gb|EKF75102.1| PII uridylyl-transferase [Alcanivorax hongdengensis A-11-3]
Length = 887
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ T DR GLL+ I RIF L ++ A I+T+G K +D F++TD+ G PV DP +
Sbjct: 812 VDIQTLDRPGLLAHIGRIFMRFELLVQNARIATLGEKAEDVFFITDLNGEPVSDPALCQQ 871
Query: 324 IRRQI 328
+++ +
Sbjct: 872 LQQTL 876
>gi|255263503|ref|ZP_05342845.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
gi|255105838|gb|EET48512.1| protein-P-II uridylyltransferase [Thalassiobium sp. R2A62]
Length = 921
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 90/210 (42%), Gaps = 37/210 (17%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND---RAAAVVHVTDHSTGYAIKDPKRL 110
F D PG+F + LA + NVV+A +T D AA + +D T Y D RL
Sbjct: 736 FALVDHPGIFGRITGALALVGANVVDARTYTSKDGYVTAAFWIQDSD-DTPY---DEDRL 791
Query: 111 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVE 167
+++++ L G R A T I RER I FD+ E
Sbjct: 792 PRLRKMIERTLAGDILPRDALTDRDK--IKKRERAFKVPTHITFDNDGSEI--------- 840
Query: 168 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
YT+I + ++DRP LLFD+ +L + + ++ T +
Sbjct: 841 ----------------YTIIEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDT 884
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIER 257
FY++ + GL SE++++ + + L AIE+
Sbjct: 885 FYVKDMFGLKFYSESKQKTLERKLRDAIEQ 914
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR +++ I A I+T G +V DTFYV D+ G
Sbjct: 844 IEVDTRDRPGLLFDLTRSLAASNIYIANAVIATYGEQVVDTFYVKDMFG 892
>gi|421853162|ref|ZP_16285841.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478622|dbj|GAB31044.1| uridylyltransferase PII [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 996
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 94/229 (41%), Gaps = 29/229 (12%)
Query: 29 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 88
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 89 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 148
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 149 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 207
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISS----EAERERVIQCLE 252
+ + T A FY++ + GL I+ E RER++ L+
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL D+T +L I A I+T G + D FYV D+ G + D K ++
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 324 IRRQI 328
IR ++
Sbjct: 971 IRERL 975
>gi|258542748|ref|YP_003188181.1| PII uridylyl-transferase [Acetobacter pasteurianus IFO 3283-01]
gi|384042669|ref|YP_005481413.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
gi|384051186|ref|YP_005478249.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|384054294|ref|YP_005487388.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|384057528|ref|YP_005490195.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|384060169|ref|YP_005499297.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|384063461|ref|YP_005484103.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|384119471|ref|YP_005502095.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256633826|dbj|BAH99801.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01]
gi|256636885|dbj|BAI02854.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-03]
gi|256639938|dbj|BAI05900.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-07]
gi|256642994|dbj|BAI08949.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-22]
gi|256646049|dbj|BAI11997.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-26]
gi|256649102|dbj|BAI15043.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-32]
gi|256652089|dbj|BAI18023.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655146|dbj|BAI21073.1| uridylyltransferase PII [Acetobacter pasteurianus IFO 3283-12]
Length = 996
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 29 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 88
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 89 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 148
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 149 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 207
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 256
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL D+T +L I A I+T G + D FYV D+ G + D K ++
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 324 IRRQI 328
IR ++
Sbjct: 971 IRERL 975
>gi|421849578|ref|ZP_16282556.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
gi|371459639|dbj|GAB27759.1| uridylyltransferase PII [Acetobacter pasteurianus NBRC 101655]
Length = 996
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 29 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 88
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 89 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 148
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 149 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 207
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 256
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL D+T +L I A I+T G + D FYV D+ G + D K ++
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 324 IRRQI 328
IR ++
Sbjct: 971 IRERL 975
>gi|226945943|ref|YP_002801016.1| PII uridylyl-transferase [Azotobacter vinelandii DJ]
gi|548353|sp|P36223.1|GLND_AZOVI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|259492000|sp|C1DSU8.1|GLND_AZOVD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|39257|emb|CAA42173.1| uridylyl transferase [Azotobacter vinelandii]
gi|226720870|gb|ACO80041.1| protein-P-II uridylyltransferase [Azotobacter vinelandii DJ]
Length = 899
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 7/83 (8%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ I +IF + LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LEIIAPDRPGLLARIGKIFLDFDLSLQNAKIATLGERVEDVFFVTDAHNQPLSDPELCAR 876
Query: 324 IRRQI------GHTKLQVKRSTI 340
++ I G + +Q R +I
Sbjct: 877 LQLAIAEQLADGDSYIQPSRISI 899
>gi|329114652|ref|ZP_08243411.1| uridylyltransferase [Acetobacter pomorum DM001]
gi|326696132|gb|EGE47814.1| uridylyltransferase [Acetobacter pomorum DM001]
Length = 996
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 25/229 (10%)
Query: 29 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 88
DA AP L V +P T + D PGLFS++ LA ++V+A I T
Sbjct: 776 ADAKDAP-LTVEVLPLPARGVTEVTIYTVDVPGLFSKIAGALALAGASIVDARIHTMTHG 834
Query: 89 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 148
A ++G A ++ +L+ + L+ L G+ D + ++ G + R+
Sbjct: 835 MALDTFWIQDTSGQAYEETHKLARLASLIEQGLSGHIDISE---EIARAGFGHMPMRMRA 891
Query: 149 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTD 207
I P+V + N I YTVI + +DRP LL D+ ++
Sbjct: 892 IHVP--------------------PRVVIDNGISNTYTVIEINGRDRPGLLHDVTAAMSR 931
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 256
+ + T A FY++ + GL I+ + E + + L A ++
Sbjct: 932 ENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEEIRERLLAGLK 980
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL D+T +L I A I+T G + D FYV D+ G + D K ++
Sbjct: 911 IEINGRDRPGLLHDVTAAMSRENLQIASAHITTYGVRAVDVFYVKDLFGLKITDKKRLEE 970
Query: 324 IRRQI 328
IR ++
Sbjct: 971 IRERL 975
>gi|220921155|ref|YP_002496456.1| PII uridylyl-transferase [Methylobacterium nodulans ORS 2060]
gi|219945761|gb|ACL56153.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium nodulans ORS
2060]
Length = 1029
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 34 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV 93
AP L S+ + T +E +G DRPGL E+ L+ L+ N+ +A + T +R V
Sbjct: 919 APDL--SIDNALSSRETVLEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVF 976
Query: 94 HVTDHSTGYAIKDPKRLSTIKELLFNVLRG 123
+VTD TG I P R +TI+ + V G
Sbjct: 977 YVTD-LTGTKITQPDRQATIRRAVMGVFEG 1005
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL ++T +L+I A ++T G +V D FYVTD+TG + P +
Sbjct: 935 LEISGLDRPGLLYELTTALSRLNLNITSAHVATFGERVVDVFYVTDLTGTKITQPDRQAT 994
Query: 324 IRRQI 328
IRR +
Sbjct: 995 IRRAV 999
>gi|408483321|ref|ZP_11189540.1| PII uridylyl-transferase [Pseudomonas sp. R81]
Length = 356
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP++
Sbjct: 273 LELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDADNQPLSDPEL 329
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 27/144 (18%)
Query: 1 MDVFNVIDCDG----------KKIRD---------KEVIDYIQQRLETDA---SFAPSLR 38
+D + V+D DG KKIR+ E IQ+R+ +FAP +
Sbjct: 202 LDTYIVLDTDGDSIGDNPARVKKIREGLTEALRNPDEYPTIIQRRVPRQLKHFAFAPQVT 261
Query: 39 -SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
S+ P T +E + DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 262 ISNDAQRPV---TVLELSAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD 318
Query: 98 HSTGYAIKDPKRLSTIKELLFNVL 121
+ + DP+ ++E + L
Sbjct: 319 -ADNQPLSDPELCLRLQEAIVQQL 341
>gi|398864639|ref|ZP_10620171.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
gi|398244757|gb|EJN30296.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM78]
Length = 900
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ + IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITDANNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG K+IRD + DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ T +E T DRPGL + V + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + DP S +++ + L
Sbjct: 863 ANNQPLSDPLLCSRLQDAIVEQL 885
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 77/197 (39%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDTDGDSIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I++ L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIRDGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL + + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARVGTIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I + P+S
Sbjct: 853 RVEDVFFITDANNQPLS 869
>gi|354594396|ref|ZP_09012435.1| PII uridylyl-transferase [Commensalibacter intestini A911]
gi|353672072|gb|EHD13772.1| PII uridylyl-transferase [Commensalibacter intestini A911]
Length = 975
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 87/214 (40%), Gaps = 27/214 (12%)
Query: 44 MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
+P T + D PGLFS++ LA ++V+A I T + +
Sbjct: 755 LPDRGVTEVTVYAGDHPGLFSKISGALAVAGASIVDARIHTLTNGMVLDTFWIQDAAQDV 814
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
DP RL I EL+ L G D K R + ++ M Y R +A+
Sbjct: 815 FDDPHRLERIIELINTALAGTVDIEK------------RLQECNRHML----YGRRMRAI 858
Query: 164 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
P+V + N + +TVI + +DR LL+D+ T+ + + + + T
Sbjct: 859 ------HVPPRVVIDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGI 912
Query: 223 EAYQEFYIRHVDGLPISSEAE----RERVIQCLE 252
A FY++ V GL + RE +++ LE
Sbjct: 913 RAVDVFYVKDVFGLKVQDRKRLSIVREAILKVLE 946
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 255 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ +AS G +E+ DR+GLL D+T+ +E L I A I+T G + D FYV DV G
Sbjct: 866 IDNQASNGFTVIEVNGRDRIGLLYDVTKTIKEQKLQISSAHITTYGIRAVDVFYVKDVFG 925
Query: 314 NPV-DPKIIDSIRRQI 328
V D K + +R I
Sbjct: 926 LKVQDRKRLSIVREAI 941
>gi|67633328|gb|AAY78579.1| uridylyltransferase [uncultured bacterium MedeBAC82F10]
Length = 851
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 77/175 (44%), Gaps = 29/175 (16%)
Query: 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG-MVNTGRTEAYQEFYIRHVDGLPISSE 241
+Y + + +R +L DIV Q + +++ + F++ I +
Sbjct: 672 EYGAVIVICPNRSGVLKDIVAGFHSSQINILGSRIISLNNNDIIDVFWVTSSIQKAIIEK 731
Query: 242 AERERVIQCLEAAIERRASEGLE---------------------------LELCTEDRVG 274
E+ERVIQ + A++ + E + ++ + DR G
Sbjct: 732 NEQERVIQNITASLNQEELETYQTLFQTKIKVEVEPRITIDNQMSKLATTFQILSGDRQG 791
Query: 275 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 328
LL DI +IF + ++S++ A+IST G KV D F +TD+ V D K + ++ Q+
Sbjct: 792 LLMDILQIFHDQNMSVQSAKISTYGEKVFDIFQITDLKNKKVKDTKTLKTLEDQL 846
>gi|260431485|ref|ZP_05785456.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415313|gb|EEX08572.1| protein-P-II uridylyltransferase [Silicibacter lacuscaerulensis
ITI-1157]
Length = 939
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 47/253 (18%)
Query: 27 LETDASFAPSLRS----------SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLH 74
L+T FA LR+ + + P E+ T F D PG+F+ + LA
Sbjct: 715 LDTHVEFAKMLRALEHSGDPGEMEIHLHPDEDRDATRACFAMADHPGIFARIAGALALAG 774
Query: 75 CNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSL 134
NVV+A +T D + G+ + RL +K+++ L+G R A +
Sbjct: 775 ANVVDARSYTTKDGYVTDAFWIQDADGHPF-EAARLPRLKQMIHKTLKGEVVARDALKTR 833
Query: 135 SPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRS 191
I RE+ + I FD+ E YT+I + +
Sbjct: 834 DK--IKKREKAFNVPTHITFDNDGSE-------------------------IYTIIEVDT 866
Query: 192 KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 251
+DRP LL+D+ TL + + ++ T + FY++ + GL SE+++ + L
Sbjct: 867 RDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFGLKYYSESKQ----RTL 922
Query: 252 EAAIERRASEGLE 264
EA + + +EG E
Sbjct: 923 EAKLRKAIAEGAE 935
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R ++ I A I+T G +V DTFYV D+ G
Sbjct: 862 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDTFYVKDMFG 910
>gi|384920430|ref|ZP_10020438.1| PII uridylyl-transferase [Citreicella sp. 357]
gi|384465698|gb|EIE50235.1| PII uridylyl-transferase [Citreicella sp. 357]
Length = 920
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 99/220 (45%), Gaps = 31/220 (14%)
Query: 41 VGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
+ + P E+ T + F +D PG+F+ + L+ + NVV+A +T D A V
Sbjct: 718 IDIHPDEDRDATRVCFALSDHPGIFARLAGALSLVGANVVDARTFTSKDGFATAVFWIQD 777
Query: 99 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 158
G ++ RL +++++ L G R+A I +R R +++
Sbjct: 778 MDGTPFEE-SRLPRLRDMIRKTLWGEVKPREA--------IHSRLR-----------FKK 817
Query: 159 VEKAVGRVEDKSSRPQVTVLNIEKD--YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 216
E+A S P + E YT+I + ++DRP LL+D+ TL++ + +
Sbjct: 818 RERAF-------SVPTSITFDNEGSEIYTIIEVDTRDRPGLLYDLTRTLSESNVYIASAV 870
Query: 217 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIE 256
+ T + FY++ + GL + ++++ + L AIE
Sbjct: 871 IATYGEQVVDTFYVKDMFGLKFFTPSKQKTLEHRLRDAIE 910
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR E+++ I A I+T G +V DTFYV D+ G
Sbjct: 841 IEVDTRDRPGLLYDLTRTLSESNVYIASAVIATYGEQVVDTFYVKDMFG 889
>gi|197286133|ref|YP_002152005.1| PII uridylyl-transferase [Proteus mirabilis HI4320]
gi|194683620|emb|CAR44522.1| [protein-PII] uridylyltransferase [Proteus mirabilis HI4320]
Length = 881
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 162 AVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
A +E S+ P V + E T I + DRP L + L + + + T
Sbjct: 675 AQALIEHNSAEPMVLISQQTEHGGTEIFIWCADRPSLFASVAGELDRRNLNIHNAQIFTN 734
Query: 221 RTE-AYQEFYIRHVDGLPIS---SEAERERVIQCLEAAIERRA----------------- 259
R A F + +G P++ A R+ +I+ + A A
Sbjct: 735 RDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTK 794
Query: 260 --------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 311
++ +EL DR GLL+ I ++F + SLS+ A I+TIG +V+D F +TD
Sbjct: 795 INFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDN 854
Query: 312 TGNPVDPKIIDSI 324
N ++ K+ D +
Sbjct: 855 ENNALNQKMKDEV 867
>gi|384247953|gb|EIE21438.1| hypothetical protein COCSUDRAFT_53990 [Coccomyxa subellipsoidea
C-169]
Length = 290
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 51 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 110
+IEF DR G + A L +L N+ A+I A ++TD T I RL
Sbjct: 93 TIEFG--DRLGQLLDTIAALKNLKLNIRRAKI--KAGAGANKFYITDALTSEKILKSARL 148
Query: 111 STIKELLFNVLRGYDDFRKAK----TSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 166
I+ +FN L Y A S SP + LH + RD +++ +V
Sbjct: 149 EEIRLTIFNNLLKYHPESGAAIGWGASASP---VTEADPLHPL--GTRDTPKIKTSVEVS 203
Query: 167 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
E++S ++ +++R++DRP LL DIV TL D+ V V+T A
Sbjct: 204 EEESG-----------THSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKD 252
Query: 227 EFYIRHVDGLPIS 239
EFY+ + G P++
Sbjct: 253 EFYVTY-HGEPLN 264
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
T DR GLL+DI ++ S+++ AE+ T G KD FYVT G P++P +
Sbjct: 217 TRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDEFYVT-YHGEPLNPSM 267
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 35 PSLRSSVGVMPTEE--HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 92
P +++SV V E H+ + DRPGL +++ L D+ NV++AE+ T A
Sbjct: 194 PKIKTSVEVSEEESGTHSKVSIRTRDRPGLLTDIVHTLKDISVNVISAEVDTEGPVAKDE 253
Query: 93 VHVTDHS 99
+VT H
Sbjct: 254 FYVTYHG 260
>gi|381152286|ref|ZP_09864155.1| (protein-PII) uridylyltransferase [Methylomicrobium album BG8]
gi|380884258|gb|EIC30135.1| (protein-PII) uridylyltransferase [Methylomicrobium album BG8]
Length = 876
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+EL T DR GLLS I R F + +++ A+I+TIG + +D FYVTD P+ D +
Sbjct: 806 IELITTDRAGLLSKIGRAFLKQHINLHNAKITTIGSRAEDMFYVTDSALRPITDAETQKK 865
Query: 324 IRRQI 328
+R +I
Sbjct: 866 LREEI 870
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
P T IE TDR GL S++ H N+ NA+I T RA + +VTD S I
Sbjct: 799 PLSHCTIIELITTDRAGLLSKIGRAFLKQHINLHNAKITTIGSRAEDMFYVTD-SALRPI 857
Query: 105 KDPKRLSTIKELLFNVLRG 123
D + ++E + + L G
Sbjct: 858 TDAETQKKLREEIVSALGG 876
>gi|426407999|ref|YP_007028098.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
gi|426266216|gb|AFY18293.1| PII uridylyl-transferase [Pseudomonas sp. UW4]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDGKKIRD-----KEVID--------------YIQQRLETDA---SFAPSLR 38
+D + V+D DG I D K++ D IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDTDGDSIGDNPARVKQIRDGLTEALRNPDNYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ + T +E T DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRQVTVLELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + DP S +++ + L
Sbjct: 863 AHNQPLSDPLLCSRLQDAIVEQL 885
>gi|398957202|ref|ZP_10677152.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
gi|398148649|gb|EJM37319.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM33]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
>gi|83944326|ref|ZP_00956781.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
gi|83844870|gb|EAP82752.1| PII uridylyl-transferase [Sulfitobacter sp. EE-36]
Length = 927
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 742 FVMADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAEGNPY-DVSRLPRL 800
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
++++ L+G R A S + RE+ I FD+ E
Sbjct: 801 RQMISKTLKGEILARDALKSRDK--VKKREKVFKVPTHITFDNEGSE------------- 845
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ +L++ + + ++ T + FY+
Sbjct: 846 ------------IYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 231 RHVDGLPISSEAERERVIQCLEAAI 255
+ + GL +E++++ + + L AAI
Sbjct: 894 KDMFGLKYYTESKQKTLEKRLRAAI 918
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR E+++ I A I+T G +V DTFYV D+ G
Sbjct: 850 IEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDMFG 898
>gi|322419213|ref|YP_004198436.1| metal dependent phosphohydrolase [Geobacter sp. M18]
gi|320125600|gb|ADW13160.1| metal dependent phosphohydrolase [Geobacter sp. M18]
Length = 894
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 85/200 (42%), Gaps = 24/200 (12%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
D PGLFS + V+A N++ A+I T+ + + + G+ I + R + + L
Sbjct: 717 DIPGLFSMITGVMAANGMNILGAQIHTNTNEKVLDILQVNSPQGFVITEESRWARFETDL 776
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKSSRPQVT 176
VL G + P I+ E+ + V RVE +
Sbjct: 777 RQVLEGKVRVGQLVAKRHRPSILT---------------EKAKPTVPARVEIDN------ 815
Query: 177 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
+ DYTVI + + D+ LL+ I TLT + + ++T + FY++ + G
Sbjct: 816 --EVSSDYTVIDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQ 873
Query: 237 PISSEAERERVIQCLEAAIE 256
IS A+ E + + L AA++
Sbjct: 874 KISEPAKLEEIRKELLAAVD 893
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ D+VGLL IT L I ++IST +V D FYV D+ G + +P ++
Sbjct: 824 IDIYAHDKVGLLYSITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKISEPAKLEE 883
Query: 324 IRRQI 328
IR+++
Sbjct: 884 IRKEL 888
>gi|398851998|ref|ZP_10608670.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
gi|398245286|gb|EJN30809.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM80]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNEGESIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPTRVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I P+S
Sbjct: 853 RVEDVFFITDAHNQPLS 869
>gi|288958557|ref|YP_003448898.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
gi|288910865|dbj|BAI72354.1| [protein-PII] uridylyltransferase [Azospirillum sp. B510]
Length = 947
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 37/213 (17%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + TD GLFS + LA ++V+A I+T + A V + G A + +
Sbjct: 742 TEVTIYATDHSGLFSRLAGALAACGADIVDARIFTMTNGMALDVFSVQDAAGGAFESSDK 801
Query: 110 LSTIKELLFNVLRG----YDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKA 162
L+ + ++ VL G +D +TS + +R R H +++ D+
Sbjct: 802 LAKLSVMIEKVLSGQLKPLNDLATRRTSHA-----SRTRVFHVPPRVLIDN--------- 847
Query: 163 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
N +TVI + +DRP LL+D+ L+++ + ++T
Sbjct: 848 ----------------NASTTHTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGE 891
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
+A FY++ V GL ++ E + ++ + L +A+
Sbjct: 892 KAIDVFYVKDVFGLKVTHEGKLAKIKERLLSAL 924
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ DR GLL D+TR +L I A+IST G K D FYV DV G
Sbjct: 856 IEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVKDVFG 904
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
HT IE G DRPGL ++ L++L + +A+I T ++A V +V D G +
Sbjct: 853 HTVIEVNGRDRPGLLYDLTRALSNLTLQISSAKISTFGEKAIDVFYVKD-VFGLKVTHEG 911
Query: 109 RLSTIKELLFNVL 121
+L+ IKE L + L
Sbjct: 912 KLAKIKERLLSAL 924
>gi|83953368|ref|ZP_00962090.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
gi|83842336|gb|EAP81504.1| PII uridylyl-transferase [Sulfitobacter sp. NAS-14.1]
Length = 927
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 31/205 (15%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 742 FVMADHPGIFARLAGALALVGANVVDARSYTTKDGWVTDAFWIQDAEGNPY-DVSRLPRL 800
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
++++ L+G R A S + RE+ I FD+ E
Sbjct: 801 RQMISKTLKGEILARDALKSRDK--VKKREKVFKVPTHITFDNEGSE------------- 845
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ +L++ + + ++ T + FY+
Sbjct: 846 ------------IYTIIEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYV 893
Query: 231 RHVDGLPISSEAERERVIQCLEAAI 255
+ + GL +E++++ + + L AAI
Sbjct: 894 KDMFGLKYYTESKQKTLEKRLRAAI 918
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR E+++ I A I+T G +V DTFYV D+ G
Sbjct: 850 IEVDTRDRPGLLYDLTRSLSESNVYIANAVIATYGEQVVDTFYVKDMFG 898
>gi|398984036|ref|ZP_10690345.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
gi|399011339|ref|ZP_10713671.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398118081|gb|EJM07821.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM16]
gi|398156153|gb|EJM44577.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM24]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 76/197 (38%), Gaps = 33/197 (16%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
E T I D+ F+ A + L+ N+ +A + T + + ++ + G +I D
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARVITSSSQFTLDTYIVLDNEGESIGD 761
Query: 107 -PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE--RRLHQIMFDDRDYERVEKAV 163
P R+ I+E L LR DD+ P I+ R R+L F
Sbjct: 762 NPARVKQIREGLTEALRNPDDY---------PTIIQRRVPRQLKHFAF------------ 800
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
PQVT+ N ++ TV+ + + DRP LL I + + + + T
Sbjct: 801 --------APQVTIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGE 852
Query: 223 EAYQEFYIRHVDGLPIS 239
F+I P+S
Sbjct: 853 RVEDVFFITDAHNQPLS 869
>gi|389683284|ref|ZP_10174616.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
gi|388552797|gb|EIM16058.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis O6]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD + DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDANNQQLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQDAI 881
>gi|398965080|ref|ZP_10680746.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
gi|398147534|gb|EJM36238.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM30]
Length = 900
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ I IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDG----------KKIRD------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG K+IRD + DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDNDGESIGDNPTRIKQIRDGLTEALRNPDDYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ T +E T DRPGL + + + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRPVTVLELTAPDRPGLLARIGGIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + DP S +++ + L
Sbjct: 863 AHNQPLSDPLLCSRLQDAIVEQL 885
>gi|126732334|ref|ZP_01748134.1| PII uridylyl-transferase [Sagittula stellata E-37]
gi|126707203|gb|EBA06269.1| PII uridylyl-transferase [Sagittula stellata E-37]
Length = 896
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 43/219 (19%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD--- 106
T + F D PG+FS + LA NVV+A +T D A V + G +D
Sbjct: 707 TRVCFALQDHPGIFSRLTGALALSGANVVDARTFTTRDGYATAVFWIQDADGAPYEDVRI 766
Query: 107 PKRLSTIKELLFN------VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVE 160
P+ TI++ L ++ D ++K + + P I FD+ E
Sbjct: 767 PRLRETIRKTLTGEVVAREAVKSRDKYKKRERAFKVPT---------HITFDNEGSE--- 814
Query: 161 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
+T+I + ++DRP LL+D+ L + ++ T
Sbjct: 815 ----------------------IFTIIEVDTRDRPSLLYDLARVLASQNIYIASAVIATY 852
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259
+ FY++ + GL + S+ +R+ + + L A++ A
Sbjct: 853 GEQVVDTFYVKDMFGLKLHSKTKRDLIEKKLRLAMQEGA 891
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
+E+ T DR LL D+ R+ ++ I A I+T G +V DTFYV D+ G + K
Sbjct: 819 IEVDTRDRPSLLYDLARVLASQNIYIASAVIATYGEQVVDTFYVKDMFGLKLHSK 873
>gi|113460972|ref|YP_719039.1| PII uridylyl-transferase [Haemophilus somnus 129PT]
gi|112823015|gb|ABI25104.1| uridylyltransferase [Haemophilus somnus 129PT]
Length = 861
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 260 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
E E+ELC DR GLL++I++IF + L++ A+ISTIG KV+D F +T+
Sbjct: 788 QEQTEMELCALDRAGLLAEISQIFVQLELNLLNAKISTIGEKVEDFFILTN 838
>gi|117928771|ref|YP_873322.1| PII uridylyl-transferase [Acidothermus cellulolyticus 11B]
gi|117649234|gb|ABK53336.1| metal dependent phosphohydrolase [Acidothermus cellulolyticus 11B]
Length = 771
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 266 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIR 325
E+ DR GLL I RI ++ L ++ A++ T+G D FYVTD G P+ + +R
Sbjct: 700 EVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVTDTAGKPLSEAAAEEVR 759
Query: 326 RQIGHTKLQVKR 337
R + L +R
Sbjct: 760 RALETALLDGRR 771
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 77/201 (38%), Gaps = 37/201 (18%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK-DPKRLSTIKEL 116
D+PGL VLA LH V A T D A V V D Y + DP RL +E
Sbjct: 600 DQPGLLWRSAGVLA-LHRLGVRAARATSIDSTA--VTVFDVEPEYLAEIDPDRL---RED 653
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVT 176
L L G D A ++ G + + + P
Sbjct: 654 LRRALDGSLDLSAALA---------------------------RRSAGAAQRQPAAPPPV 686
Query: 177 VL--NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
VL D TV +R+ DRP LLF I L+D V V T +A FY+
Sbjct: 687 VLLPAASADATVFEVRAHDRPGLLFTIARILSDHGLDVRLAQVETLGADAVDVFYVTDTA 746
Query: 235 GLPISSEAERERVIQCLEAAI 255
G P+ SEA E V + LE A+
Sbjct: 747 GKPL-SEAAAEEVRRALETAL 766
>gi|254417899|ref|ZP_05031623.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
gi|196184076|gb|EDX79052.1| protein-P-II uridylyltransferase [Brevundimonas sp. BAL3]
Length = 900
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 95/240 (39%), Gaps = 31/240 (12%)
Query: 23 IQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 82
+Q+ +T A+ + + V +P + T I DRPGLF+++ +A L +V +A +
Sbjct: 652 VQRARQTGAAAQAAPLTPVEGLPVQA-TEISIAAADRPGLFADLAQTMAALGADVTDARV 710
Query: 83 WTHNDRAAAVVHVTDHSTG--YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
T ++ V G Y +P+RL + + L RG + + S +P
Sbjct: 711 ATTSEGVVLDVFRVQDGAGLPYGQAEPRRLKALVDALEKAARG-----EGRISKAPAPAG 765
Query: 141 NRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLF 199
N + ++ RP V V + + TV+ + DRP LL
Sbjct: 766 NARKAAFEV----------------------RPVVMVDHHASETATVVEVSGADRPGLLA 803
Query: 200 DIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259
+ +D + V + A FY+ G I+SE + LEA ++ RA
Sbjct: 804 ALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDGKGRKITSEQRIAELRTALEAVLDSRA 863
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 33/177 (18%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE-FYIR 231
P V + T I++ + DRP L D+ T+ + V V T + F ++
Sbjct: 666 PLTPVEGLPVQATEISIAAADRPGLFADLAQTMAALGADVTDARVATTSEGVVLDVFRVQ 725
Query: 232 HVDGLPISSEAER--ERVIQCLEAA-----------------------------IERRAS 260
GLP R + ++ LE A ++ AS
Sbjct: 726 DGAGLPYGQAEPRRLKALVDALEKAARGEGRISKAPAPAGNARKAAFEVRPVVMVDHHAS 785
Query: 261 E-GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
E +E+ DR GLL+ ++R+F + L+I+ A +++ G + D+FYV D G +
Sbjct: 786 ETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDGKGRKI 842
>gi|170717529|ref|YP_001784620.1| PII uridylyl-transferase [Haemophilus somnus 2336]
gi|168825658|gb|ACA31029.1| metal dependent phosphohydrolase [Haemophilus somnus 2336]
Length = 861
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 260 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
E E+ELC DR GLL++I++IF + L++ A+ISTIG KV+D F +T+
Sbjct: 788 QEQTEMELCALDRAGLLAEISQIFVQLELNLLNAKISTIGEKVEDFFILTN 838
>gi|152995299|ref|YP_001340134.1| metal dependent phosphohydrolase [Marinomonas sp. MWYL1]
gi|150836223|gb|ABR70199.1| metal dependent phosphohydrolase [Marinomonas sp. MWYL1]
Length = 897
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 44/61 (72%), Gaps = 1/61 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ I + F N++ + +A+I+T+G +V+DTFY+T+ G+ + DP+ +++
Sbjct: 821 LEITAPDRPGLLALIGQFFMNNNIMLHKAKIATLGERVEDTFYITEENGDLITDPESMNN 880
Query: 324 I 324
I
Sbjct: 881 I 881
>gi|75674332|ref|YP_316753.1| PII uridylyl-transferase [Nitrobacter winogradskyi Nb-255]
gi|91206747|sp|Q3SWE0.1|GLND_NITWN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|74419202|gb|ABA03401.1| Protein-P-II uridylyltransferase [Nitrobacter winogradskyi Nb-255]
Length = 925
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ HT IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 902
Query: 106 DPKRLSTIKELLFNVL 121
P R + IK L ++L
Sbjct: 903 APTRQAAIKRALVHLL 918
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 81/217 (37%), Gaps = 29/217 (13%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 96
L +VG T + D P L S + A N+V+A+I+T D A
Sbjct: 725 LNINVGFDEARGVTELTILAADHPWLLSIIAGACASAGANIVDAQIYTTTDGQALDTIAI 784
Query: 97 DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 156
+ +R + I E++ VL G L P +M
Sbjct: 785 SREYERDEDEGRRAARIAEIIEQVLEG---------RLRLPDVMP--------------- 820
Query: 157 ERVEKAVG-RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 214
+A G R+ P+VT+ N D +T+I + DRP LLF + ++ + +
Sbjct: 821 ---SRAAGKRLRPFVVEPKVTINNQWSDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIAS 877
Query: 215 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 251
V T A FY+ + G I++ + + + L
Sbjct: 878 AHVATFGERARDVFYVTDLLGARITAPTRQAAIKRAL 914
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 850 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTRQAA 909
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 910 IKRALVH 916
>gi|90421866|ref|YP_530236.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB18]
gi|90103880|gb|ABD85917.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris BisB18]
Length = 931
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+E +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 904
Query: 106 DPKRLSTIKELLFNVLRGYD 125
P R + IK L ++L D
Sbjct: 905 APTRQAAIKRALIHLLANGD 924
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 84/209 (40%), Gaps = 38/209 (18%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 103
T + D P L S + A N+V+A+I+T D RA + +T D G
Sbjct: 739 TELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAITREYDRDDDEG-- 796
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
+R + I E++ ++L G L P ++ R
Sbjct: 797 ----RRATRIGEMIEDILEG---------KLRLPEVVARR----------------ASGK 827
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
G+++ + P+V + N + YTVI + DRP LL+ + +++ + + V T
Sbjct: 828 GKLKPFTVEPEVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGE 887
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCL 251
A FY+ + G I++ + + + L
Sbjct: 888 RARDVFYVTDLLGAQITAPTRQAAIKRAL 916
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 252 EAAIERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
E AI + SE +E+ DR GLL +T + +L+I A ++T G + +D FYVTD
Sbjct: 838 EVAINNQWSERYTVIEVSGLDRPGLLYQLTTSISKLNLNIASAHVATFGERARDVFYVTD 897
Query: 311 VTGNPVD-PKIIDSIRRQIGH 330
+ G + P +I+R + H
Sbjct: 898 LLGAQITAPTRQAAIKRALIH 918
>gi|387814878|ref|YP_005430365.1| uridylyltransferase [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381339895|emb|CCG95942.1| uridylyltransferase [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 881
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+EL T DR GLL+ I ++ E+ + + A+I+T+G +V+D F++TD G+P+ DP + +
Sbjct: 809 MELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFITDEQGDPLRDPGVCQA 868
Query: 324 IRRQI 328
+++ +
Sbjct: 869 LQQDL 873
>gi|402773665|ref|YP_006593202.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
gi|401775685|emb|CCJ08551.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. SC2]
Length = 936
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 5/123 (4%)
Query: 11 GKKIRDKEVIDYIQQRLETDA-SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAV 69
G+ + +E+ + L TDA S AP + V + +T IE +G DR GL E+
Sbjct: 812 GEVVVSEELRARAKTHLPTDAFSVAPEV--VVDNSLSNVYTVIEVSGLDREGLLFELTNA 869
Query: 70 LADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRK 129
++ L+ N+ +A I T +RA +VTD TG I P+R + IK L +V G R
Sbjct: 870 ISRLNLNIASAHIVTFGERAVDAFYVTD-LTGAKIASPQRQAAIKRQLLDVFGG-PGARG 927
Query: 130 AKT 132
AKT
Sbjct: 928 AKT 930
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL ++T +L+I A I T G + D FYVTD+TG + P+ +
Sbjct: 852 IEVSGLDREGLLFELTNAISRLNLNIASAHIVTFGERAVDAFYVTDLTGAKIASPQRQAA 911
Query: 324 IRRQI 328
I+RQ+
Sbjct: 912 IKRQL 916
>gi|332288112|ref|YP_004418964.1| PII uridylyltransferase [Gallibacterium anatis UMN179]
gi|330431008|gb|AEC16067.1| PII uridylyltransferase [Gallibacterium anatis UMN179]
Length = 877
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 163 VGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 221
+ ++ED S+ V V + + T I + D+P+L +V TL + + T
Sbjct: 677 LCQIEDLSNEIVVLVSSRFSRGATEIFIYCADQPQLFNKVVRTLDAKNLSIHDAQIITAE 736
Query: 222 T-EAYQEFYIRHVDGLPISSEAERERVIQCLEA----------AIERRAS---------- 260
+ E + F + DG + ++ R+ + Q L+A A RR+S
Sbjct: 737 SGEVFDSFIVTENDGSALR-KSRRDEIAQVLKAVLKGEKRVPTATARRSSKLQHFNVPLE 795
Query: 261 ---------EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 311
E ELEL T+DR GLL+ I+ IF + L++ A+I+T G K +D F +T+
Sbjct: 796 VCFLNIEKTEQTELELITKDRAGLLAIISDIFTQQRLTLSNAKITTNGEKAEDFFILTNE 855
Query: 312 TGNPV 316
G +
Sbjct: 856 KGTAL 860
>gi|297599874|ref|NP_001048007.2| Os02g0729500 [Oryza sativa Japonica Group]
gi|255671227|dbj|BAF09921.2| Os02g0729500 [Oryza sativa Japonica Group]
Length = 159
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRP 60
MDVF+V D G K+ + VI YI+Q L M E T++E TG R
Sbjct: 88 MDVFHVTDRLGCKLTNDSVITYIEQSLGM-------WNGPTRPMALEGLTALELTGAGRT 140
Query: 61 GLFSEVCAVLADLHC 75
GL SEV AVLAD+ C
Sbjct: 141 GLISEVFAVLADMDC 155
>gi|85713993|ref|ZP_01044982.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
gi|85699119|gb|EAQ36987.1| PII uridylyl-transferase [Nitrobacter sp. Nb-311A]
Length = 925
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ HT IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRHTMIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGARIT 902
Query: 106 DPKRLSTIKELLFNVL 121
P R + IK L ++L
Sbjct: 903 APTRQTAIKRALVHLL 918
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 850 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGARITAPTRQTA 909
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 910 IKRALVH 916
>gi|406894154|gb|EKD39032.1| hypothetical protein ACD_75C00526G0001, partial [uncultured
bacterium]
Length = 771
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 89/227 (39%), Gaps = 36/227 (15%)
Query: 38 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
RS V TE+ + DRPGL +++C V+A + VV A+I+T D VV V D
Sbjct: 571 RSLVVASETEDSWQLLIMTVDRPGLLAKICGVMALNNLTVVKAQIFTWAD--GTVVDVID 628
Query: 98 ----HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDD 153
G+A K + L+ +L H++
Sbjct: 629 VRATDGLGFAEKGWRSLNEQLDLAIE---------------------------HRMGLSH 661
Query: 154 RDYERVEKAVGRVEDKSSRPQVTVL---NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQY 210
R Y ++ GR ++ V+ ++Y+VI + + D P L+ I ++ D
Sbjct: 662 RLYRKLSSGYGRRSQRAGEVASKVVIDNKSSENYSVIEVYASDSPGQLYHITQSMADFGL 721
Query: 211 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257
+ + T + FY+ G + E R+ V Q + +I+R
Sbjct: 722 NIHKAYIATELEQLIDVFYVLDSRGQKLVDEDFRQEVTQGILHSIDR 768
>gi|326794433|ref|YP_004312253.1| UTP-GlnB uridylyltransferase, GlnD [Marinomonas mediterranea MMB-1]
gi|326545197|gb|ADZ90417.1| UTP-GlnB uridylyltransferase, GlnD [Marinomonas mediterranea MMB-1]
Length = 899
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 47/70 (67%), Gaps = 4/70 (5%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
LE+ DR GLL+ I + F +N++ + +A+I+T+G +++DTFY+T+ G I DS+
Sbjct: 821 LEITAPDRPGLLAVIGQFFMQNNIMLHKAKIATLGERIEDTFYITEQNGE----LITDSM 876
Query: 325 RRQIGHTKLQ 334
R ++ T+L+
Sbjct: 877 RMKMICTRLK 886
>gi|425071434|ref|ZP_18474540.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW4]
gi|404599241|gb|EKA99701.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW4]
Length = 881
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 30/193 (15%)
Query: 162 AVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
A +E S+ P V + E T + + DRP L + L + + + T
Sbjct: 675 AQALIEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTN 734
Query: 221 RTE-AYQEFYIRHVDGLPISSE---AERERVIQCLEAAIERRA----------------- 259
R A F + +G P++ + A R+ +I+ + A A
Sbjct: 735 RDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTK 794
Query: 260 --------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 311
++ +EL DR GLL+ I ++F + SLS+ A I+TIG +V+D F +TD
Sbjct: 795 INFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDN 854
Query: 312 TGNPVDPKIIDSI 324
N ++ K+ D +
Sbjct: 855 ENNALNQKMKDEV 867
>gi|414884706|tpg|DAA60720.1| TPA: hypothetical protein ZEAMMB73_962452 [Zea mays]
Length = 418
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDG--LPISSEA 242
TV+T+ D+ L D+ + + V G ++T Y ++ G +P+ +
Sbjct: 21 TVVTVSCPDKTGLGCDLCRVVLLFRLSVVKGDMSTDGRWCYIVLWVLPRGGRPVPVPWDL 80
Query: 243 ERERVIQCLEAAI------ERRASEGLE-----------LELCTEDRVGLLSDITRIFRE 285
++R++Q A A+ GL+ L+LC DR+GLL D+TR+ E
Sbjct: 81 LKDRLLQLCPVAPPFGFDNAYLAAAGLQDLAPPPPKLFLLKLCCFDRMGLLHDVTRVLCE 140
Query: 286 NSLSIKRAEISTI-GGKVKDTFYVTD 310
L+I+R ++ST G V D F++TD
Sbjct: 141 LELTIRRVKVSTTPDGSVLDLFFITD 166
>gi|227357253|ref|ZP_03841610.1| [protein-PII] uridylyltransferase [Proteus mirabilis ATCC 29906]
gi|227162516|gb|EEI47505.1| [protein-PII] uridylyltransferase [Proteus mirabilis ATCC 29906]
Length = 881
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 30/193 (15%)
Query: 162 AVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
A +E S+ P V + E T + + DRP L + L + + + T
Sbjct: 675 AQALIEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTN 734
Query: 221 RTE-AYQEFYIRHVDGLPIS---SEAERERVIQCLEAAIERRA----------------- 259
R A F + +G P++ A R+ +I+ + A A
Sbjct: 735 RDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTK 794
Query: 260 --------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 311
++ +EL DR GLL+ I ++F + SLS+ A I+TIG +V+D F +TD
Sbjct: 795 INFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDN 854
Query: 312 TGNPVDPKIIDSI 324
N ++ K+ D +
Sbjct: 855 ENNALNQKMKDEV 867
>gi|224110036|ref|XP_002315393.1| predicted protein [Populus trichocarpa]
gi|222864433|gb|EEF01564.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 23/186 (12%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
+ T +E T DR G + L +L NVV A ++ + +T STG + DP
Sbjct: 85 DATVVEVTFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNTFSITKASTGRKVDDP 144
Query: 108 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG-RV 166
+ L I+ + N L Y ++ ++ I F ++V+ + RV
Sbjct: 145 ELLEAIRLTIINNLLQYHPESSSQLAMG-------------IAFGVEPPKQVDVDIATRV 191
Query: 167 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
+ K P ++L +E + DRP LL D+V +TD+ V G +T A
Sbjct: 192 KVKEDSPDRSLLFVE---------AADRPGLLVDLVKAITDINIAVESGEFDTEGLLAKA 242
Query: 227 EFYIRH 232
+F++ +
Sbjct: 243 KFHVSY 248
>gi|31789388|gb|AAP58504.1| putative PII uridylyltransferase [uncultured Acidobacteria
bacterium]
Length = 938
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 1/102 (0%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+FA ++ + +T +E TG DR GL E+ A L+ L+ N+ +A + T +R
Sbjct: 838 AFALEPTVTINNQWSHRYTMVEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVID 897
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTS 133
V +VTD G I P R + IK L + G ++ KA +
Sbjct: 898 VFYVTD-LLGAQITSPTRQAAIKRALIALFAGPNNESKAAKA 938
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL ++T + +L+I A ++T G +V D FYVTD+ G + P +
Sbjct: 858 VEVTGLDRAGLLYELTATLSKLNLNIASAHVATFGERVIDVFYVTDLLGAQITSPTRQAA 917
Query: 324 IRRQI 328
I+R +
Sbjct: 918 IKRAL 922
>gi|425070066|ref|ZP_18473181.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW6]
gi|404596023|gb|EKA96553.1| protein-P-II uridylyltransferase [Proteus mirabilis WGLW6]
Length = 881
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 30/193 (15%)
Query: 162 AVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
A +E S+ P V + E T + + DRP L + L + + + T
Sbjct: 675 AQALIEHNSAEPMVLISQQTEHGGTEVFIWCADRPSLFASVAGELDRRNLNIHNAQIFTN 734
Query: 221 RTE-AYQEFYIRHVDGLPISSE---AERERVIQCLEAAIERRA----------------- 259
R A F + +G P++ + A R+ +I+ + A A
Sbjct: 735 RDNMAMDTFIVLEPNGKPLAIDRYHAIRQALIRVVSAPYNANAKTRALPAKLRHFEVPTK 794
Query: 260 --------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 311
++ +EL DR GLL+ I ++F + SLS+ A I+TIG +V+D F +TD
Sbjct: 795 INFIASNHNKRTYMELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDN 854
Query: 312 TGNPVDPKIIDSI 324
N ++ K+ D +
Sbjct: 855 ENNALNQKMKDEV 867
>gi|452853079|ref|YP_007494763.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
gi|451896733|emb|CCH49612.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio piezophilus]
Length = 867
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 83/202 (41%), Gaps = 25/202 (12%)
Query: 51 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 110
++ D PGLF+ + LA N++ A+I+T D A V + + +P
Sbjct: 682 TLTIAALDSPGLFATIAGALALHGLNILAADIFTWKDGTAVDV--------FTVGEPPEN 733
Query: 111 STIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKS 170
E+ V R R K ++ E RL D R+ K G
Sbjct: 734 LFPHEVWARVKRSIGYARVGK--------LDIESRLE----DRRNSPLTMKRPG----PR 777
Query: 171 SRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 229
RP VT+ N D YTVI + + DR LFD+ TL ++ + + T + A F+
Sbjct: 778 LRPIVTIDNSASDFYTVIEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFH 837
Query: 230 IRHVDGLPISSEAERERVIQCL 251
IR +G ++ A + V + L
Sbjct: 838 IRDTEGGKLTDSARLQAVHEAL 859
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ DR G L D+ R SLSI A+I+TI G+ D F++ D G K+ DS
Sbjct: 795 IEVAATDRTGFLFDMARTLANLSLSIHLAKITTIKGRAADIFHIRDTEGG----KLTDSA 850
Query: 325 RRQIGHTKL 333
R Q H L
Sbjct: 851 RLQAVHEAL 859
>gi|259416431|ref|ZP_05740351.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
gi|259347870|gb|EEW59647.1| protein-P-II uridylyltransferase [Silicibacter sp. TrichCH4B]
Length = 907
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 31/205 (15%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+F+ + LA + NVV+A +T D + G+ + RL +
Sbjct: 722 FVMPDHPGIFARIAGALALVGANVVDARSYTTKDGFVTDAFWIQDADGHPF-EASRLPRL 780
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
+ ++ L G R A S I RER I FD+ D S
Sbjct: 781 RSMIEKTLHGEVIARDALKSRDK--IKKRERAFRVPTHITFDN--------------DGS 824
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL+D+ TL + + ++ T + FY+
Sbjct: 825 D-----------IYTIIEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYV 873
Query: 231 RHVDGLPISSEAERERVIQCLEAAI 255
+ + GL S A+++ + + L AI
Sbjct: 874 KDMFGLKYHSAAKQQSLEKKLREAI 898
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R ++ I A I+T G +V D+FYV D+ G
Sbjct: 830 IEVDTRDRPGLLYDLARTLAAANVYIANAVIATYGEQVVDSFYVKDMFG 878
>gi|425897799|ref|ZP_18874390.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892389|gb|EJL08867.1| protein-P-II uridylyltransferase [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 900
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD + DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQDAI 881
>gi|420241261|ref|ZP_14745409.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
gi|398072002|gb|EJL63238.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF080]
Length = 945
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLL+DIT + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 848 DRTGLLADITAVLADLSLDIHSARITTFGEKVIDTFYVTDLVGQKV 893
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 11 GKKIRDKEVIDYIQQRLETDASFA--PSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCA 68
GKK R EVI + + + +F PS+ S G+ + + T IE DR GL +++ A
Sbjct: 802 GKK-RLPEVIATRAKSRKRNKTFTIPPSVILSNGL--SNKFTVIEVECLDRTGLLADITA 858
Query: 69 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 128
VLADL ++ +A I T ++ +VTD G + + R I L V+ +D
Sbjct: 859 VLADLSLDIHSARITTFGEKVIDTFYVTD-LVGQKVVNENRQGNIAARLKAVMSEQEDEL 917
Query: 129 KAKTSLSPPGIM 140
++ P GI+
Sbjct: 918 RSGM---PTGII 926
>gi|393765065|ref|ZP_10353658.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
gi|392729489|gb|EIZ86761.1| PII uridylyl-transferase [Methylobacterium sp. GXF4]
Length = 935
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E TG DRPGL E+ L N+ +A + T +RA V +VTD TG + P R
Sbjct: 841 TVVEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVTQPDR 899
Query: 110 LSTIKELLFNVLRG 123
+ I++ + +V G
Sbjct: 900 QAAIRKAMLDVFAG 913
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN---------P 315
+E+ DR GLL ++T F SL+I A ++T G + D FYVTD+TG
Sbjct: 843 VEVTGLDRPGLLYELTTAFGRLSLNITSAHVATFGERAVDVFYVTDLTGTRVTQPDRQAA 902
Query: 316 VDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET 349
+ ++D + + + + + AP PP+E
Sbjct: 903 IRKAMLDVFAGDVAMLRAEGLEALVAAP-PPREA 935
>gi|399006249|ref|ZP_10708777.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
gi|398122708|gb|EJM12294.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM17]
Length = 900
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I +IF E LS++ A+I+T+G +V+D F++TD + DP++
Sbjct: 817 LELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQQLSDPQLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQDAI 881
>gi|115522288|ref|YP_779199.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisA53]
gi|115516235|gb|ABJ04219.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
BisA53]
Length = 931
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 846 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 904
Query: 106 DPKRLSTIKELLFNVLRGYDDFRK 129
P R + IK L ++L D +K
Sbjct: 905 APTRQAAIKRALIHLLADADAAQK 928
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 83/209 (39%), Gaps = 37/209 (17%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT-----DHSTGYA 103
T + D P L S + A N+V+A+I+T D RA + +T D G
Sbjct: 738 TELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTIAITREYDRDEDEG-- 795
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
+R + I +++ VL G L P ++ R R
Sbjct: 796 ----RRATRIGDMIEEVLEG---------KLRLPDVVAR---------------RATNGK 827
Query: 164 GRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
G+++ + P+V + N D YTVI + DRP LL+ + ++ + + V T
Sbjct: 828 GKLKPFTVEPEVAINNSWSDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGE 887
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCL 251
A FY+ + G I++ + + + L
Sbjct: 888 RARDVFYVTDLLGAQITAPTRQAAIKRAL 916
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 852 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 911
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 912 IKRALIH 918
>gi|77457326|ref|YP_346831.1| PII uridylyl-transferase [Pseudomonas fluorescens Pf0-1]
gi|398976829|ref|ZP_10686639.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
gi|91206750|sp|Q3KHB4.1|GLND_PSEPF RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|77381329|gb|ABA72842.1| uridylyltransferase [Pseudomonas fluorescens Pf0-1]
gi|398138712|gb|EJM27726.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM25]
Length = 900
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 44/69 (63%), Gaps = 5/69 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP----K 319
LEL DR GLL+ + IF E LS++ A+I+T+G +V+D F++TD P+ DP +
Sbjct: 817 LELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPLLCSR 876
Query: 320 IIDSIRRQI 328
+ D+I Q+
Sbjct: 877 LQDAIVEQL 885
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 25/143 (17%)
Query: 1 MDVFNVIDCDGKKIRD-----KEVIDYIQQRLETDA-----------------SFAPSLR 38
+D + V+D DG I D K++ D + + L A +FAP +
Sbjct: 746 LDTYIVLDTDGDSIGDNPVRVKQIRDGLTEALRNPADYPTIIQRRVPRQLKHFAFAPQV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ T +E T DRPGL + V + + ++ NA+I T +R V +TD
Sbjct: 805 -TIHNDAQRPVTVLELTAPDRPGLLARVGGIFLEFDLSLQNAKIATLGERVEDVFFITD- 862
Query: 99 STGYAIKDPKRLSTIKELLFNVL 121
+ + DP S +++ + L
Sbjct: 863 AHNQPLSDPLLCSRLQDAIVEQL 885
>gi|291286752|ref|YP_003503568.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
gi|290883912|gb|ADD67612.1| UTP-GlnB uridylyltransferase, GlnD [Denitrovibrio acetiphilus DSM
12809]
Length = 863
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ +DR+GLL DI R F + L+++RA+IST +V D+FY+ D G + D +++D+
Sbjct: 790 VDIYAKDRIGLLYDILRSFNKQELNVERAKISTDVDRVVDSFYLVDKHGKKITDQRVLDN 849
Query: 324 IRRQIG 329
IR ++
Sbjct: 850 IRGELS 855
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 47 EEHTSIEF--TGTDRPGLFSEVCAVLADLHCNVVNAEIWT-HNDRAAAVVHVTDHSTGYA 103
EE +IE DRP L S++C L+ N+ A+I+T ND + + + +G
Sbjct: 671 EELDTIELIVCAKDRPALLSDICGALSSFSYNIKWAKIYTMENDVTIDNIMIANPFSGRK 730
Query: 104 IKDPKRLSTIKELLFNVLRGYDDFRK---AKTSLSPPGIMNRERRLHQIMFDDRDYERVE 160
+ + K+ S K ++ + G D R+ +++S+ P + ++ +I+FD+
Sbjct: 731 MPEDKQESLKKRIINTIKDGRDIKRQITQSESSIKGPAQVFIKK--DKIVFDN------- 781
Query: 161 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
++ +YT++ + +KDR LL+DI+ + + V ++T
Sbjct: 782 ------------------DVSTNYTIVDIYAKDRIGLLYDILRSFNKQELNVERAKISTD 823
Query: 221 RTEAYQEFYIRHVDGLPISSE 241
FY+ G I+ +
Sbjct: 824 VDRVVDSFYLVDKHGKKITDQ 844
>gi|397676406|ref|YP_006517944.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
gi|395397095|gb|AFN56422.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 29191]
Length = 926
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 85/209 (40%), Gaps = 26/209 (12%)
Query: 23 IQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 82
+QQ ++TD S S+ + MP + T I D PG F + + N+++A I
Sbjct: 710 MQQIIDTD-SKGQSISVTGHEMPAYDATMISLYAIDHPGFFYRISGAIHATGGNILDARI 768
Query: 83 WTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 142
T D A + +S G IK + L+ + + + + + +L PP + R
Sbjct: 769 HTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQAIEDAATSHIRSSNKLAALRPP-LFWR 827
Query: 143 ERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDI 201
+ H VE P V + N D +TVI + ++DRP LL D+
Sbjct: 828 GKAFH-----------VE------------PLVFIDNQASDRFTVIEVNAQDRPALLHDL 864
Query: 202 VCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
C L + + + + T A FY+
Sbjct: 865 GCALFNARLTISSAHIATYGERAVDVFYV 893
>gi|4520376|dbj|BAA75913.1| uridylyl transferase [Pseudomonas aeruginosa]
Length = 900
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
>gi|309811519|ref|ZP_07705301.1| ACT domain protein [Dermacoccus sp. Ellin185]
gi|308434570|gb|EFP58420.1| ACT domain protein [Dermacoccus sp. Ellin185]
Length = 489
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 4/69 (5%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP----KI 320
+E+ DR+GLL D+ F +S++ A I+T G+ DTFYVTD G+P+ P ++
Sbjct: 418 IEVRAADRLGLLFDVGSAFAAERVSVRSAHIATYAGRSADTFYVTDEQGSPLAPPHAARV 477
Query: 321 IDSIRRQIG 329
I ++ +G
Sbjct: 478 IGAVLDAVG 486
>gi|398382543|ref|ZP_10540628.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
gi|397726649|gb|EJK87082.1| (protein-PII) uridylyltransferase [Sphingobium sp. AP49]
Length = 920
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 90/230 (39%), Gaps = 26/230 (11%)
Query: 36 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 95
SL + P T + TD PGLF + + N+++A I T D A +
Sbjct: 714 SLSIAAQYYPQRGATLVTVYATDHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFL 773
Query: 96 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRD 155
G A P++L IK + + SLS NR R + ++ + R
Sbjct: 774 VQDPFGGAFHSPEQLGRIKAAI-------------EDSLS-----NRHRLITKL--EARP 813
Query: 156 YERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFH 214
R R E P V + N + +TVI + ++DRP LLF + L + V
Sbjct: 814 LPRT-----RAEAFQIVPNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHS 868
Query: 215 GMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
V T A FY+ + G I S A + + + L A SE LE
Sbjct: 869 AHVATYGERAVDTFYVTDLLGGKIESRARLQTLERRLLEAAGGETSELLE 918
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
+E+ DR LL + ++ +++ A ++T G + DTFYVTD+ G ++ +
Sbjct: 841 IEVNARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVTDLLGGKIESR 895
>gi|345865282|ref|ZP_08817470.1| [protein-PII] uridylyltransferase [endosymbiont of Tevnia
jerichonana (vent Tica)]
gi|345876936|ref|ZP_08828696.1| [protein-PII] uridylyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344226044|gb|EGV52387.1| [protein-PII] uridylyltransferase [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345123611|gb|EGW53503.1| [protein-PII] uridylyltransferase [endosymbiont of Tevnia
jerichonana (vent Tica)]
Length = 884
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+ L T DR GLLS++ + F +S++ A+ISTIG +V+D F++TD P+ + + ++
Sbjct: 810 MRLVTLDRPGLLSEVGQAFLACGISLQHAKISTIGAQVEDIFFITDRDKQPLQEEQQLEC 869
Query: 324 IRRQIGHTKLQVKRSTILAPKPPKE 348
+RR I PK P+E
Sbjct: 870 LRRSIAER----------LPKTPEE 884
>gi|414175718|ref|ZP_11430122.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
gi|410889547|gb|EKS37350.1| [protein-PII] uridylyltransferase [Afipia broomeae ATCC 49717]
Length = 947
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 40 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 99
S+ ++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD
Sbjct: 856 SINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-L 914
Query: 100 TGYAIKDPKRLSTIKELLFNVLRGYDDFRK 129
G I P R + IK L ++L D K
Sbjct: 915 LGAQITAPTRQAAIKRALIHLLANGDAAEK 944
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 26/203 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 755 TELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEGRR 814
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
+ I + + VL G L P +M R + R++
Sbjct: 815 ATRIGDTIEQVLEG---------KLRLPDMMARR----------------TASKTRLKPF 849
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
S P+V++ N D YTVI + DRP LLF + ++ + + V T A F
Sbjct: 850 SVEPEVSINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVF 909
Query: 229 YIRHVDGLPISSEAERERVIQCL 251
Y+ + G I++ + + + L
Sbjct: 910 YVTDLLGAQITAPTRQAAIKRAL 932
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 868 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 927
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 928 IKRALIH 934
>gi|146281909|ref|YP_001172062.1| PII uridylyl-transferase [Pseudomonas stutzeri A1501]
gi|339493516|ref|YP_004713809.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
gi|386020180|ref|YP_005938204.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|189041209|sp|A4VJR9.1|GLND_PSEU5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|145570114|gb|ABP79220.1| protein-PII uridylyltransferase [Pseudomonas stutzeri A1501]
gi|327480152|gb|AEA83462.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 4166]
gi|338800888|gb|AEJ04720.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 17588 = LMG
11199]
Length = 900
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP++
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPQLCLR 876
Query: 324 IRRQI 328
+++ I
Sbjct: 877 LQQAI 881
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
T +E DRPGL + V + D +V NA+I T +R V VTD + + DP+
Sbjct: 814 QTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQPLSDPQ 872
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSL 134
+++ + L+ ++ + + +S+
Sbjct: 873 LCLRLQQAIIKELQQENEQQPSPSSI 898
>gi|374328694|ref|YP_005078878.1| [protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
gi|359341482|gb|AEV34856.1| [Protein-PII] uridylyltransferase [Pseudovibrio sp. FO-BEG1]
Length = 942
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 32 SFAPSLRSSVGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 89
S A SL+++V V + E +T +E TG DRPGL S++ ++ L+ N+ +A + T ++A
Sbjct: 830 SKAFSLQTTVLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKA 889
Query: 90 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 123
V +VTD TG + + R +I++ L N G
Sbjct: 890 VDVFYVTD-LTGQKVHNVGRQESIRDRLKNAFDG 922
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
LE+ DR GLLSD+T +L+I A + T G K D FYVTD+TG V
Sbjct: 852 LEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDLTGQKV 903
>gi|254472092|ref|ZP_05085492.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
gi|211958375|gb|EEA93575.1| protein-P-II uridylyltransferase [Pseudovibrio sp. JE062]
Length = 942
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 32 SFAPSLRSSVGVMPT--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 89
S A SL+++V V + E +T +E TG DRPGL S++ ++ L+ N+ +A + T ++A
Sbjct: 830 SKAFSLQTTVLVSNSWSENYTVLEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKA 889
Query: 90 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 123
V +VTD TG + + R +I++ L N G
Sbjct: 890 VDVFYVTD-LTGQKVHNVGRQESIRDRLKNAFDG 922
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
LE+ DR GLLSD+T +L+I A + T G K D FYVTD+TG V
Sbjct: 852 LEVTGLDRPGLLSDLTTEISALNLNIASAHVGTFGEKAVDVFYVTDLTGQKV 903
>gi|407781039|ref|ZP_11128259.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
gi|407208465|gb|EKE78383.1| PII uridylyl-transferase [Oceanibaculum indicum P24]
Length = 973
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 83/207 (40%), Gaps = 28/207 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + D PGLFS + +A ++V+A I+T D A +T P +
Sbjct: 764 TEVTICTPDHPGLFSRLAGAMAVAGASIVDARIFTMTDGMALDTFWVQDATDGPFDQPTK 823
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L+ + + + G R+A + + +R R V +V
Sbjct: 824 LARLSAAIHKAMSGELKTRQALREKAAGALPSRTR------------------VFKVP-- 863
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P+V + N +TVI + +DRP LL DI L + V ++T A F
Sbjct: 864 ---PRVLIDNKASATHTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVF 920
Query: 229 YIRHVDGLPISSEAE----RERVIQCL 251
Y++ V GL + ++ RE+++ L
Sbjct: 921 YVKDVFGLKVEHASKLAAIREKLLTAL 947
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 31/53 (58%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+EL DR GLLSDI R + SL + A+IST G D FYV DV G V+
Sbjct: 879 IELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVKDVFGLKVE 931
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
HT IE G DRPGL S++ L L V +A+I T+ + A V +V D G ++
Sbjct: 876 HTVIELNGRDRPGLLSDIARALNQLSLQVSSAKISTYGETAIDVFYVKD-VFGLKVEHAS 934
Query: 109 RLSTIKELLFNVL 121
+L+ I+E L L
Sbjct: 935 KLAAIREKLLTAL 947
>gi|119477100|ref|ZP_01617336.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
gi|119449463|gb|EAW30701.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2143]
Length = 896
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ T DR GLL+ I +IF + + + A+I+T+G V D F++TD P+ DP + +S
Sbjct: 822 LEVLTPDRPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFITDNNHQPINDPALCES 881
Query: 324 IRRQI 328
I+ I
Sbjct: 882 IQNAI 886
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 1 MDVFNVIDCDGKKI-RDKEVIDYIQQRL-----ETDAS--------------FAPSLRSS 40
+D F V+D +G+ I D E ID IQ L TD+S F+ R++
Sbjct: 751 LDTFFVLDSNGEPIGNDPERIDEIQSVLMEHLINTDSSLDIMQCRTPRQMRLFSVPTRTT 810
Query: 41 VGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 100
+ H+ +E DRPGL + + + D ++NA+I T + V +TD++
Sbjct: 811 LFTDVAGGHSVLEVLTPDRPGLLARIGKIFLDYDIKLLNAKIATLGESVDDVFFITDNNH 870
Query: 101 GYAIKDPKRLSTIK 114
I DP +I+
Sbjct: 871 -QPINDPALCESIQ 883
>gi|120555461|ref|YP_959812.1| PII uridylyl-transferase [Marinobacter aquaeolei VT8]
gi|120325310|gb|ABM19625.1| metal dependent phosphohydrolase [Marinobacter aquaeolei VT8]
Length = 881
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+EL T DR GLL+ I ++ E+ + + A+I+T+G +V+D F++TD G P+ DP + +
Sbjct: 809 MELITPDRPGLLARIGQVLLEHRVRLTNAKIATLGERVEDVFFITDEQGEPLRDPGVCQA 868
Query: 324 IRRQI 328
+++ +
Sbjct: 869 LQQDL 873
>gi|408376881|ref|ZP_11174484.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
gi|407748840|gb|EKF60353.1| PII uridylyl-transferase [Agrobacterium albertimagni AOL15]
Length = 941
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR+GLL++IT + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRIGLLAEITAVLSDLSLDIHSARITTFGEKVIDTFYVTDLVGQKV 893
>gi|85375192|ref|YP_459254.1| PII uridylyl-transferase [Erythrobacter litoralis HTCC2594]
gi|122543574|sp|Q2N784.1|GLND_ERYLH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|84788275|gb|ABC64457.1| uridylyltransferase [Erythrobacter litoralis HTCC2594]
Length = 919
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 34/182 (18%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPIS 239
E+ T++T+ + D P L + I + + ++T R A + ++ G P +
Sbjct: 723 ERGATLVTVIAADHPGLFYRIAGGIHLAGGNIIDARIHTTRNGWAIDNYLVQDPVGQPFA 782
Query: 240 SEAERERVIQCLEAAIERR-------ASEGLE-------------------------LEL 267
E + R+ Q + AI R A L+ +E+
Sbjct: 783 EERQLARIEQAIADAIANRGELVPKLAKRPLKQTRAGAFDVRPRVLFDNDASGRFTVIEV 842
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRR 326
DR LL+ + R EN + ++ A I+ G + DTFYVTD+TG + D +D+IR+
Sbjct: 843 NARDRAALLNRLGRALFENQVIVQSAHITAYGERAADTFYVTDLTGAKITDESRMDTIRQ 902
Query: 327 QI 328
+
Sbjct: 903 AL 904
>gi|389866034|ref|YP_006368275.1| [protein-PII] uridylyltransferase [Modestobacter marinus]
gi|388488238|emb|CCH89811.1| [Protein-PII] uridylyltransferase [Modestobacter marinus]
Length = 787
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 101/250 (40%), Gaps = 37/250 (14%)
Query: 11 GKKIRDKEVIDYIQQRLETDASFAPSLRS--SVGVMPTEEHTSIEFTGTDRPGLFSEVCA 68
G + V++ Q ++ T A P +VGV + + DRPGLFS
Sbjct: 557 GSAPLPEPVLEPTQPQVTTPAPSVPGQTGPVTVGVEDVLDGQQVTIGAADRPGLFSLCAG 616
Query: 69 VLADLHCNVVNAEIWTHNDRAAAVVHVTDHST-GYAIKDPKRLSTIKELLFNVLRGYDDF 127
VLA +V RAA V H T +A++ + E+L D
Sbjct: 617 VLALNQLDV----------RAARVSVQDGHGTLVFAVRPRFGRPPVPEIL------ADGV 660
Query: 128 RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYT-- 185
R A P G R+R +RDY + +++ GR P+++ + E T
Sbjct: 661 RAALEGTLPLGERLRQR--------ERDYSQ-DRSPGRP------PRISWFDAEATGTTG 705
Query: 186 VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERE 245
++ +R+ DR LL + L D V V T +A FY+ G PI + +RE
Sbjct: 706 LVEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSDPSGTPIDPD-QRE 764
Query: 246 RVIQCLEAAI 255
R + L AA+
Sbjct: 765 RAERALVAAV 774
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 318
+E+ DR GLL +T + L + A + T+G D FYV+D +G P+DP
Sbjct: 707 VEVRATDRAGLLHRLTAALADAGLDVSSATVETLGADAVDAFYVSDPSGTPIDP 760
>gi|296387835|ref|ZP_06877310.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAb1]
gi|416873843|ref|ZP_11917746.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
gi|334844257|gb|EGM22834.1| PII uridylyl-transferase [Pseudomonas aeruginosa 152504]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 28/137 (20%)
Query: 1 MDVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG I + K DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVT 805
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
S + + + +E DRPGL + + + D +V NA+I T +R V ++TD
Sbjct: 806 ISTDAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD- 862
Query: 99 STGYAIKDP---KRLST 112
+ + DP KRL
Sbjct: 863 ARNQPLADPDLCKRLQA 879
>gi|313109063|ref|ZP_07795035.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|386067693|ref|YP_005982997.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|392982618|ref|YP_006481205.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
gi|419754750|ref|ZP_14281108.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|310881537|gb|EFQ40131.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 39016]
gi|348036252|dbj|BAK91612.1| PII uridylyl-transferase [Pseudomonas aeruginosa NCGM2.S1]
gi|384398568|gb|EIE44973.1| PII uridylyl-transferase [Pseudomonas aeruginosa PADK2_CF510]
gi|392318123|gb|AFM63503.1| PII uridylyl-transferase [Pseudomonas aeruginosa DK2]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 28/137 (20%)
Query: 1 MDVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG I + K DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVT 805
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
S + + + +E DRPGL + + + D +V NA+I T +R V ++TD
Sbjct: 806 ISTDAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD- 862
Query: 99 STGYAIKDP---KRLST 112
+ + DP KRL
Sbjct: 863 ARNQPLADPDLCKRLQA 879
>gi|116051655|ref|YP_789506.1| PII uridylyl-transferase [Pseudomonas aeruginosa UCBPP-PA14]
gi|421173104|ref|ZP_15630858.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
gi|122260798|sp|Q02RD0.1|GLND_PSEAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|115586876|gb|ABJ12891.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa
UCBPP-PA14]
gi|404536405|gb|EKA46045.1| PII uridylyl-transferase [Pseudomonas aeruginosa CI27]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 28/137 (20%)
Query: 1 MDVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG I + K DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVT 805
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
S + + + +E DRPGL + + + D +V NA+I T +R V ++TD
Sbjct: 806 ISTDAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD- 862
Query: 99 STGYAIKDP---KRLST 112
+ + DP KRL
Sbjct: 863 ARNQPLADPDLCKRLQA 879
>gi|452878644|ref|ZP_21955838.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
gi|452184717|gb|EME11735.1| PII uridylyl-transferase [Pseudomonas aeruginosa VRFPA01]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 28/137 (20%)
Query: 1 MDVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG I + K DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVT 805
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
S + + + +E DRPGL + + + D +V NA+I T +R V ++TD
Sbjct: 806 ISTDAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD- 862
Query: 99 STGYAIKDP---KRLST 112
+ + DP KRL
Sbjct: 863 ARNQPLADPDLCKRLQA 879
>gi|15598854|ref|NP_252348.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO1]
gi|254236571|ref|ZP_04929894.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|254242355|ref|ZP_04935677.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|355639998|ref|ZP_09051488.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|386057355|ref|YP_005973877.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|418586107|ref|ZP_13150153.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|418589465|ref|ZP_13153387.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|421152533|ref|ZP_15612113.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|421166110|ref|ZP_15624378.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|421518201|ref|ZP_15964875.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|451987762|ref|ZP_21935914.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
gi|12230934|sp|Q9Z9H0.2|GLND_PSEAE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|9949819|gb|AAG07046.1|AE004785_10 protein-PII uridylyltransferase [Pseudomonas aeruginosa PAO1]
gi|126168502|gb|EAZ54013.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa C3719]
gi|126195733|gb|EAZ59796.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa 2192]
gi|347303661|gb|AEO73775.1| PII uridylyl-transferase [Pseudomonas aeruginosa M18]
gi|354831518|gb|EHF15530.1| uridylyltransferase [Pseudomonas sp. 2_1_26]
gi|375043781|gb|EHS36397.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P1]
gi|375051699|gb|EHS44165.1| PII uridylyl-transferase [Pseudomonas aeruginosa MPAO1/P2]
gi|404347683|gb|EJZ74032.1| PII uridylyl-transferase [Pseudomonas aeruginosa PAO579]
gi|404525293|gb|EKA35569.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 14886]
gi|404539087|gb|EKA48592.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 700888]
gi|451754521|emb|CCQ88437.1| [Protein-PII] uridylyltransferase [Pseudomonas aeruginosa 18A]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 28/137 (20%)
Query: 1 MDVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG I + K DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVT 805
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
S + + + +E DRPGL + + + D +V NA+I T +R V ++TD
Sbjct: 806 ISTDAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD- 862
Query: 99 STGYAIKDP---KRLST 112
+ + DP KRL
Sbjct: 863 ARNQPLADPDLCKRLQA 879
>gi|107103172|ref|ZP_01367090.1| hypothetical protein PaerPA_01004241 [Pseudomonas aeruginosa PACS2]
gi|218890117|ref|YP_002438981.1| PII uridylyl-transferase [Pseudomonas aeruginosa LESB58]
gi|416854831|ref|ZP_11911161.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|420138143|ref|ZP_14646084.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|421158549|ref|ZP_15617797.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|421179178|ref|ZP_15636774.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|424939528|ref|ZP_18355291.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|226723946|sp|B7V7F5.1|GLND_PSEA8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|218770340|emb|CAW26105.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa LESB58]
gi|334843580|gb|EGM22167.1| PII uridylyl-transferase [Pseudomonas aeruginosa 138244]
gi|346055974|dbj|GAA15857.1| protein-PII uridylyltransferase [Pseudomonas aeruginosa NCMG1179]
gi|403249126|gb|EJY62641.1| PII uridylyl-transferase [Pseudomonas aeruginosa CIG1]
gi|404547421|gb|EKA56419.1| PII uridylyl-transferase [Pseudomonas aeruginosa E2]
gi|404549490|gb|EKA58348.1| PII uridylyl-transferase [Pseudomonas aeruginosa ATCC 25324]
gi|453047335|gb|EME95049.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA21_ST175]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 28/137 (20%)
Query: 1 MDVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG I + K DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVT 805
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
S + + + +E DRPGL + + + D +V NA+I T +R V ++TD
Sbjct: 806 ISTDAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD- 862
Query: 99 STGYAIKDP---KRLST 112
+ + DP KRL
Sbjct: 863 ARNQPLADPDLCKRLQA 879
>gi|188579682|ref|YP_001923127.1| PII uridylyl-transferase [Methylobacterium populi BJ001]
gi|179343180|gb|ACB78592.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium populi BJ001]
Length = 928
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG + P R
Sbjct: 834 TVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVMQPDR 892
Query: 110 LSTIKELLFNVL 121
L+ I+ + V
Sbjct: 893 LAMIRAAVMEVF 904
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL ++T SL+I A ++T G + D FYVTD+TG V P +
Sbjct: 836 VEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVMQPDRLAM 895
Query: 324 IRRQI 328
IR +
Sbjct: 896 IRAAV 900
>gi|91974598|ref|YP_567257.1| PII uridylyl-transferase [Rhodopseudomonas palustris BisB5]
gi|91681054|gb|ABE37356.1| protein-P-II uridylyltransferase [Rhodopseudomonas palustris BisB5]
Length = 933
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 106 DPKRLSTIKELLFNVLRGYDDFRK 129
P R + IK L ++L D +K
Sbjct: 907 APTRQAAIKRALVHLLANGDAEQK 930
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 854 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 913
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 914 IKRALVH 920
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 84/222 (37%), Gaps = 37/222 (16%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 95
L +VG T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 727 LAVNVGFDEARGVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISI 786
Query: 96 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 150
D G +R + I E++ VL G L P + R
Sbjct: 787 RREYDRDEDEG------RRATRIGEIIEEVLEG---------KLRLPEAVAR-------- 823
Query: 151 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 209
R + ++ P++++ N D YTVI + DRP LL+ + ++ +
Sbjct: 824 -------RATSSKTKLRAFVVEPEISINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLN 876
Query: 210 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 251
+ V T A FY+ + G I++ + + + L
Sbjct: 877 LNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAAIKRAL 918
>gi|333908996|ref|YP_004482582.1| UTP-GlnB uridylyltransferase, GlnD [Marinomonas posidonica
IVIA-Po-181]
gi|333479002|gb|AEF55663.1| UTP-GlnB uridylyltransferase, GlnD [Marinomonas posidonica
IVIA-Po-181]
Length = 897
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ DR GLL+ I + F +++ + +A+I+T+G +V+DTFY+TD G + DP+ +D
Sbjct: 821 LEVTAPDRPGLLALIGQFFMNHNIMLHKAKIATLGERVEDTFYITDDQGELISDPQRMDK 880
Query: 324 I 324
I
Sbjct: 881 I 881
>gi|84498339|ref|ZP_00997136.1| PII uridylyl-transferase [Janibacter sp. HTCC2649]
gi|84381839|gb|EAP97722.1| PII uridylyl-transferase [Janibacter sp. HTCC2649]
Length = 789
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ DR GLL ++ F + +S++ A I+T G+ DTFYV+D +G P+DP + +
Sbjct: 718 IEVRAHDRPGLLHELGMCFAKAGVSVRSAHIATYAGQTLDTFYVSDFSGRPLDPGKVAQV 777
>gi|152988175|ref|YP_001346865.1| PII uridylyl-transferase [Pseudomonas aeruginosa PA7]
gi|166990444|sp|A6V1D0.1|GLND_PSEA7 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150963333|gb|ABR85358.1| protein-P-II uridylyltransferase [Pseudomonas aeruginosa PA7]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ I IF + LS++ A+I+T+G +V+D FY+TD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITDARNQPLADPDL 873
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 28/137 (20%)
Query: 1 MDVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG I + K DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDADGDSIGNNPERIAEIREGLIDALKNPDDYPTIIQRRVPRQLKHFAFAPQVT 805
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
S + + + +E DRPGL + + + D +V NA+I T +R V ++TD
Sbjct: 806 ISTDAL--RQVSVLEVIAPDRPGLLARIGGIFLDFDLSVQNAKIATLGERVEDVFYITD- 862
Query: 99 STGYAIKDP---KRLST 112
+ + DP KRL
Sbjct: 863 ARNQPLADPDLCKRLQA 879
>gi|429212269|ref|ZP_19203434.1| PII uridylyl-transferase [Pseudomonas sp. M1]
gi|428156751|gb|EKX03299.1| PII uridylyl-transferase [Pseudomonas sp. M1]
Length = 900
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ I +F + LS++ A+I+T+G +V+D FYVTD P+ DP +
Sbjct: 817 LEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVTDAHNQPLSDPDL 873
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 28/137 (20%)
Query: 1 MDVFNVIDCDGKKIRD----------------KEVIDY---IQQRLETDA---SFAPSLR 38
+D + V+D DG I D K DY IQ+R+ +FAP +
Sbjct: 746 LDTYIVLDADGGSIGDNPQRIAEIRQGLVDALKNPDDYPNIIQRRVPRQLKHFAFAPLV- 804
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ + + + +E DRPGL + + + D +V NA+I T +R V +VTD
Sbjct: 805 -TISTDASRQVSVLEVIAPDRPGLLARIGGLFLDFDLSVRNAKIATLGERVEDVFYVTD- 862
Query: 99 STGYAIKDP---KRLST 112
+ + DP KRL
Sbjct: 863 AHNQPLSDPDLCKRLQA 879
>gi|23012593|ref|ZP_00052640.1| COG2844: UTP:GlnB (protein PII) uridylyltransferase
[Magnetospirillum magnetotacticum MS-1]
Length = 654
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG + P R
Sbjct: 560 TVVEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVMQPDR 618
Query: 110 LSTIKELLFNVL 121
L+ I+ + V
Sbjct: 619 LAMIRAAVMEVF 630
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL ++T SL+I A ++T G + D FYVTD+TG V P +
Sbjct: 562 VEITGLDRPGLLYELTTALNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVMQPDRLAM 621
Query: 324 IRRQI 328
IR +
Sbjct: 622 IRAAV 626
>gi|50402114|sp|P62223.1|GLND_RHOPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 929
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 844 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 902
Query: 106 DPKRLSTIKELLFNVLRGYDDFRK 129
P R + IK L ++L D K
Sbjct: 903 APTRQAAIKRALVHLLANGDAAEK 926
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 850 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 909
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 910 IKRALVH 916
>gi|217978933|ref|YP_002363080.1| PII uridylyl-transferase [Methylocella silvestris BL2]
gi|217504309|gb|ACK51718.1| UTP-GlnB uridylyltransferase, GlnD [Methylocella silvestris BL2]
Length = 937
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 85/219 (38%), Gaps = 29/219 (13%)
Query: 39 SSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
+ + + P T + D P L S + A N+V+A+++T D A V
Sbjct: 730 THIDIEPLRGVTELTVIAPDSPHLLSIIAGACAASSANIVDAQVFTTTDGMALDTIVVSR 789
Query: 99 STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 158
+ + +R S I + N L G +I D R
Sbjct: 790 EFDFDEDELRRASRIAFAVENALAG------------------------EITLTDMVAAR 825
Query: 159 VEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 217
V A R + P+VT+ N + +TV+ + DRP LLFD+ ++++ + +
Sbjct: 826 VGSAGARQKTFKVHPEVTLDNSLSNRFTVVEVSGLDRPGLLFDLTTAISELDLNIGSAHI 885
Query: 218 NTGRTEAYQEFYIRHVDGL----PISSEAERERVIQCLE 252
T +A FY+ +G P+ EA R +++ +
Sbjct: 886 ATFGEKAADVFYVSDNEGTKITEPVRQEAVRRKILHIFD 924
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ DR GLL D+T E L+I A I+T G K D FYV+D G + +P ++
Sbjct: 855 VEVSGLDRPGLLFDLTTAISELDLNIGSAHIATFGEKAADVFYVSDNEGTKITEPVRQEA 914
Query: 324 IRRQIGHTKLQVKRSTILAPKPPKE 348
+RR+I H Q K + APK ++
Sbjct: 915 VRRKILHIFDQPKGES--APKSARK 937
>gi|316932060|ref|YP_004107042.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
gi|315599774|gb|ADU42309.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
DX-1]
Length = 933
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 106 DPKRLSTIKELLFNVLRGYDDFRK 129
P R + IK L ++L D K
Sbjct: 907 APTRQAAIKRALVHLLANGDAAEK 930
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 854 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 913
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 914 IKRALVH 920
>gi|39933668|ref|NP_945944.1| PII uridylyl-transferase [Rhodopseudomonas palustris CGA009]
gi|39647514|emb|CAE26035.1| Protein PII uridylyltransferase [Rhodopseudomonas palustris CGA009]
Length = 949
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 864 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 922
Query: 106 DPKRLSTIKELLFNVLRGYDDFRK 129
P R + IK L ++L D K
Sbjct: 923 APTRQAAIKRALVHLLANGDAAEK 946
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 870 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 929
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 930 IKRALVH 936
>gi|414169144|ref|ZP_11424981.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
gi|410885903|gb|EKS33716.1| [protein-PII] uridylyltransferase [Afipia clevelandensis ATCC
49720]
Length = 928
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 843 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 901
Query: 106 DPKRLSTIKELLFNVLRGYD 125
P R + IK L ++L D
Sbjct: 902 APTRQAAIKRALIHLLANGD 921
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 26/203 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 736 TELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEGRR 795
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
+ I + + VL G L P +M R + R++
Sbjct: 796 ATRIGDTIEQVLEG---------KLRLPDVMARR----------------TASKTRLKPF 830
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P+VT+ N D YTVI + DRP LLF + ++ + + V T A F
Sbjct: 831 IVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVF 890
Query: 229 YIRHVDGLPISSEAERERVIQCL 251
Y+ + G I++ + + + L
Sbjct: 891 YVTDLLGAQITAPTRQAAIKRAL 913
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 849 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 908
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 909 IKRALIH 915
>gi|302381407|ref|YP_003817230.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
gi|302192035|gb|ADK99606.1| UTP-GlnB uridylyltransferase, GlnD [Brevundimonas subvibrioides
ATCC 15264]
Length = 890
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 9/95 (9%)
Query: 255 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
I+ ASEG +E+ DR GLL++++R +++LSI+ A ++ G + D+FYVTD G
Sbjct: 773 IDPSASEGATVIEVSGADRPGLLAELSRTLSDHALSIRSAHVAGFGERAVDSFYVTDARG 832
Query: 314 NPVDPK-IIDSIRRQIGHTKLQVKRSTILAPKPPK 347
+ + ++D + H L+ AP+PP+
Sbjct: 833 RKITSEAVLDEV-----HAALEAVLDR--APEPPQ 860
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 95/227 (41%), Gaps = 32/227 (14%)
Query: 34 APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-V 92
A R G M E T I DRPGLF+++ AVLA +V A + T D V
Sbjct: 657 AAEARQGPGTM--EATTEIALAARDRPGLFADLTAVLAAAGADVAGARVATAADGTVLDV 714
Query: 93 VHVTDHST-GYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMF 151
V D + Y +P+RL+++ L RG +T ++PP + R + +F
Sbjct: 715 FQVQDGADRPYGQDEPRRLTSLIAALEAAARG-------ETPVAPPAMPAPSPR--RAVF 765
Query: 152 DDRDYERVEKAVGRVEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQY 210
D RP V + + + TVI + DRP LL ++ TL+D
Sbjct: 766 D------------------VRPVVMIDPSASEGATVIEVSGADRPGLLAELSRTLSDHAL 807
Query: 211 VVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257
+ V A FY+ G I+SEA + V LEA ++R
Sbjct: 808 SIRSAHVAGFGERAVDSFYVTDARGRKITSEAVLDEVHAALEAVLDR 854
>gi|192362270|ref|YP_001981600.1| PII uridylyl-transferase [Cellvibrio japonicus Ueda107]
gi|190688435|gb|ACE86113.1| protein-P-II uridylyltransferase [Cellvibrio japonicus Ueda107]
Length = 905
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ + DR GLL+ I RIF + + + A+I+T+G +V+D F++ D G P+ DP + +
Sbjct: 830 LEVISPDRPGLLACIGRIFMDFDIQLLNAKIATLGERVEDIFFIVDSQGKPLGDPVLCEK 889
Query: 324 IRRQI 328
++++I
Sbjct: 890 LQQEI 894
>gi|338972269|ref|ZP_08627644.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
gi|338234433|gb|EGP09548.1| uridylyltransferase [Bradyrhizobiaceae bacterium SG-6C]
Length = 928
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 843 SDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 901
Query: 106 DPKRLSTIKELLFNVLRGYD 125
P R + IK L ++L D
Sbjct: 902 APTRQAAIKRALIHLLANGD 921
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 26/203 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + D P L S + A N+V+A+I+T D A + +R
Sbjct: 736 TELTIMAPDHPWLLSIIAGACASAGANIVDAQIYTTTDGIALDTIAITREYDRDDDEGRR 795
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
+ I + + VL G L P +M R + R++
Sbjct: 796 ATRIGDTIEQVLEG---------KLRLPDVMARR----------------TASKTRLKPF 830
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P+VT+ N D YTVI + DRP LLF + ++ + + V T A F
Sbjct: 831 IVEPEVTINNQWSDRYTVIEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVF 890
Query: 229 YIRHVDGLPISSEAERERVIQCL 251
Y+ + G I++ + + + L
Sbjct: 891 YVTDLLGAQITAPTRQAAIKRAL 913
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 849 IEVSGLDRPGLLFQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 908
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 909 IKRALIH 915
>gi|334345822|ref|YP_004554374.1| UTP-GlnB uridylyltransferase GlnD [Sphingobium chlorophenolicum
L-1]
gi|334102444|gb|AEG49868.1| UTP-GlnB uridylyltransferase, GlnD [Sphingobium chlorophenolicum
L-1]
Length = 919
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 87/224 (38%), Gaps = 31/224 (13%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
P T + D PGLF + + N+++A I T D A + G A
Sbjct: 723 PQRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 105 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 164
P +LS I++ + + L NR R + ++ + R R
Sbjct: 783 HSPDQLSRIRKAIEDSL------------------ANRHRMITKL--EARPLPRTRAEAF 822
Query: 165 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
R+E P V + N + +TVI + ++DRP LLF + L + V V T
Sbjct: 823 RIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGER 877
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLE-AAIERRASEGLELE 266
A FY+ + I S+A +Q LE +E E ELE
Sbjct: 878 AVDTFYVTDLLAGKIESKAR----LQTLERRLLEAAGGEVAELE 917
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 33/172 (19%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPIS 239
++ T++T+ + D P L + I + + ++T R A F ++ G
Sbjct: 724 QRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAFH 783
Query: 240 SE--------------AERERVIQCLEA-----------------AIERRASEGLE-LEL 267
S A R R+I LEA I+ +AS +E+
Sbjct: 784 SPDQLSRIRKAIEDSLANRHRMITKLEARPLPRTRAEAFRIEPNVLIDNKASNRFTVIEV 843
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
DR LL + ++ +++ A ++T G + DTFYVTD+ ++ K
Sbjct: 844 NARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVTDLLAGKIESK 895
>gi|414589019|tpg|DAA39590.1| TPA: hypothetical protein ZEAMMB73_464424 [Zea mays]
Length = 295
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE- 243
TV+T+ D+ L D+ + V G ++T Y F++ P++ +
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 244 -RERVIQCLEAAIE---------RRASEGLE-----------LELCTEDRVGLLSDITRI 282
++R++Q A A+ GL+ L+LC DR+GLL D+TR+
Sbjct: 83 LKDRLLQLCPVAPPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLLHDVTRV 142
Query: 283 FRENSLSIKRAEISTI-GGKVKDTFYVTDVTG 313
E L+I+R ++ST G V D F++TD G
Sbjct: 143 LCELELTIRRVKVSTTPDGSVLDLFFITDARG 174
>gi|192289024|ref|YP_001989629.1| PII uridylyl-transferase [Rhodopseudomonas palustris TIE-1]
gi|192282773|gb|ACE99153.1| UTP-GlnB uridylyltransferase, GlnD [Rhodopseudomonas palustris
TIE-1]
Length = 933
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 848 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 906
Query: 106 DPKRLSTIKELLFNVLRGYDDFRK 129
P R + IK L ++L D K
Sbjct: 907 APTRQAAIKRALVHLLANGDAAEK 930
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 854 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 913
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 914 IKRALVH 920
>gi|402490590|ref|ZP_10837379.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
gi|401810616|gb|EJT02989.1| PII uridylyl-transferase [Rhizobium sp. CCGE 510]
Length = 968
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 28/214 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R +TI ++ +VL G +RL +++ + + KA
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVIATRARHRKKNKAF----- 845
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|399035066|ref|ZP_10732590.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
gi|398067164|gb|EJL58707.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF122]
Length = 969
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 865 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 916
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 752 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFKDDA-DELR 810
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R TI ++ +VL G +RL +++ + KA
Sbjct: 811 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTKNRKKSKAF----- 846
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 847 -VIPPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 905
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + L+A + E
Sbjct: 906 FYVTDLVGQKISGDSKRSNITARLKAVMAEEQDE 939
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 859 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 918
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
D KR + L + D+ R+ P GI+
Sbjct: 919 DSKRSNITARLKAVMAEEQDELRERM----PSGII 949
>gi|154244241|ref|YP_001415199.1| PII uridylyl-transferase [Xanthobacter autotrophicus Py2]
gi|154158326|gb|ABS65542.1| metal dependent phosphohydrolase [Xanthobacter autotrophicus Py2]
Length = 969
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ HT +E +G DRPGL + L+ L+ N+ +A + T +RA V +VTD G I
Sbjct: 879 SNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVTD-LMGAKIT 937
Query: 106 DPKRLSTIKELLFNVLRG 123
R STI+ L V G
Sbjct: 938 GAARQSTIRRALVAVFEG 955
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 173 PQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+VTV N + +TV+ + DRP LLF + TL+ + + V T A FY+
Sbjct: 870 PEVTVNNAWSNRHTVVEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVT 929
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEG 262
+ G I+ A + + + L A E RRA+ G
Sbjct: 930 DLMGAKITGAARQSTIRRALVAVFEGPAEDEEAPRRAARG 969
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDS- 323
+E+ DR GLL +T +L+I A ++T G + D FYVTD+ G + S
Sbjct: 885 VEVSGLDRPGLLFALTNTLSRLNLNIASAHVATFGERAVDVFYVTDLMGAKITGAARQST 944
Query: 324 IRRQI 328
IRR +
Sbjct: 945 IRRAL 949
>gi|110678517|ref|YP_681524.1| PII uridylyl-transferase [Roseobacter denitrificans OCh 114]
gi|109454633|gb|ABG30838.1| protein-P-II uridylyltransferase [Roseobacter denitrificans OCh
114]
Length = 935
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F +D PG+F+ + LA + NVV+A +T D + G D RL +
Sbjct: 750 FVMSDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAFWIQDADGNPY-DATRLPRL 808
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
++++ L G + + S + RER I FD+ E
Sbjct: 809 RKMIERTLMG--EVVTTEAIKSRDKVKKRERAFKVPTHITFDNEGSE------------- 853
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL D+ TL + + + ++ T + FY+
Sbjct: 854 ------------IYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 901
Query: 231 RHVDGLPISSEAERERVIQCLEAAIER 257
+ + GL S +++ + + L AAIE+
Sbjct: 902 KDMFGLKYYSASKQRNLERRLRAAIEQ 928
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R E+++ I A I+T G +V DTFYV D+ G
Sbjct: 858 IEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDMFG 906
>gi|86747159|ref|YP_483655.1| PII uridylyl-transferase [Rhodopseudomonas palustris HaA2]
gi|86570187|gb|ABD04744.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Rhodopseudomonas
palustris HaA2]
Length = 932
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE +G DRPGL ++ ++ L+ N+ +A + T +RA V +VTD G I
Sbjct: 847 SDRYTVIEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTD-LLGAQIT 905
Query: 106 DPKRLSTIKELLFNVLRGYD 125
P R + IK L ++L D
Sbjct: 906 APTRQAAIKRALVHLLANGD 925
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 84/222 (37%), Gaps = 37/222 (16%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHV 95
L +VG T + D P L S + A N+V+A+I+T D RA + +
Sbjct: 726 LAVNVGFDEARGVTELTILAVDHPWLLSIIAGACASAGANIVDAQIYTTTDGRALDTISI 785
Query: 96 T-----DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIM 150
+ D G +R + I E++ VL G L P + R
Sbjct: 786 SREYDRDEDEG------RRATRIGEMIEEVLEG---------KLRLPEAVAR-------- 822
Query: 151 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQ 209
R ++ P+V++ N D YTVI + DRP LL+ + ++ +
Sbjct: 823 -------RATNGRAKLRAFVVEPEVSINNNWSDRYTVIEVSGLDRPGLLYQLTTAISKLN 875
Query: 210 YVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 251
+ V T A FY+ + G I++ + + + L
Sbjct: 876 LNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAAIKRAL 917
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + +L+I A ++T G + +D FYVTD+ G + P +
Sbjct: 853 IEVSGLDRPGLLYQLTTAISKLNLNIASAHVATFGERARDVFYVTDLLGAQITAPTRQAA 912
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 913 IKRALVH 919
>gi|424898000|ref|ZP_18321574.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182227|gb|EJC82266.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 968
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 28/214 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R +TI ++ +VL G +RL +++ + + KA
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVIATRARHRKKNKAF----- 845
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|409435802|ref|ZP_11263010.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
gi|408752560|emb|CCM74157.1| (Protein-PII) uridylyltransferase [Rhizobium mesoamericanum
STM3625]
Length = 969
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 871 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 916
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 752 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFKDDA-DELR 810
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R TI ++ +VL G +RL +++ + KA
Sbjct: 811 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTKNRKKSKAF----- 846
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 847 -VIPPSVNISNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 905
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + L+A + E
Sbjct: 906 FYVTDLVGQKISGDSKRSNITARLKAVMAEEQDE 939
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 859 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 918
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTS--LSPP 137
D KR + L + D+ R+ S ++PP
Sbjct: 919 DSKRSNITARLKAVMAEEQDELRERMPSGIIAPP 952
>gi|356558203|ref|XP_003547397.1| PREDICTED: uncharacterized protein LOC100793459 [Glycine max]
Length = 424
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 179 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY-IRHVDGLP 237
N D +IT+ D+ L DI + D + G V+T Y + I + LP
Sbjct: 19 NKPGDPFIITVNCPDKTGLACDICRIILDFGLCIAKGDVSTDGVWCYIVLWVIPYSVLLP 78
Query: 238 ISSE----AERERVI--QCLEA--AIER--RASEGLELELCTEDRVGLLSDITRIFRENS 287
+S ER + I CL + I++ R+S L+ C DR GLL D+T++ E
Sbjct: 79 MSCSYLILKERLQKICPPCLASFYVIQQPSRSSPVYLLKFCCLDRKGLLHDVTKVLSELE 138
Query: 288 LSIKRAEISTI-GGKVKDTFYVTD 310
L+I++ +++T G+V D F+VTD
Sbjct: 139 LTIQKVKVTTTPDGRVLDLFFVTD 162
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 36/235 (15%)
Query: 23 IQQRLETDASFAPSLRSSVGVMPTEEHTS----IEFTGTDRPGLFSEVCAVLADLHCNVV 78
+++RL+ P +S V+ +S ++F DR GL +V VL++L +
Sbjct: 86 LKERLQ---KICPPCLASFYVIQQPSRSSPVYLLKFCCLDRKGLLHDVTKVLSELELTIQ 142
Query: 79 NAEIWTHND-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPP 137
++ T D R + VTD+ ++ R E L VLR D + L+ P
Sbjct: 143 KVKVTTTPDGRVLDLFFVTDNKELLHTRN--RQDETCERLNAVLR--DSCISCELQLAGP 198
Query: 138 ------GIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL---NIEKD----- 183
GI + L + +F R E + V ++ P +T L N+ D
Sbjct: 199 EYEYNQGISSLSPALAEELF------RCELSDNEVRAQALSPDMTKLKKTNVTMDNSLSP 252
Query: 184 -YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF--YIRHVDG 235
+T++ +R D LL+DI+ TL D+ + +G + + Y++ +I+ DG
Sbjct: 253 AHTLVQIRCADHKGLLYDIMRTLKDLNMKISYGRFSPN-SMGYRDLDIFIQQKDG 306
>gi|167950394|ref|ZP_02537468.1| UTP-GlnB uridylyltransferase, GlnD [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 346
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 11/85 (12%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+ L T DR GLLS++ + F +S++ A+ISTIG +V+D F++TD P+ + + ++
Sbjct: 272 MRLVTLDRPGLLSEVGQAFLACGISLQHAKISTIGAQVEDIFFITDRDKQPLQEEQQLEC 331
Query: 324 IRRQIGHTKLQVKRSTILAPKPPKE 348
+RR I PK P+E
Sbjct: 332 LRRSIAER----------LPKTPEE 346
>gi|424879748|ref|ZP_18303380.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516111|gb|EIW40843.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 968
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 169 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 110 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 138
+ + + D+ R+ A T+ +PP
Sbjct: 922 ANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|417110224|ref|ZP_11963559.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
gi|327188578|gb|EGE55788.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CNPAF512]
Length = 968
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R TI ++ +VL G +RL +++ + KA
Sbjct: 810 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTRNRKKSKAF----- 845
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTD 909
>gi|384411454|ref|YP_005620819.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
gi|335931828|gb|AEH62368.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ATCC 10988]
Length = 926
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 26/209 (12%)
Query: 23 IQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 82
+QQ ++TD S S+ MP + T I D PG F + + N+++A I
Sbjct: 710 MQQIIDTD-SKGQSISVRGHEMPAYDATMISLYAIDHPGFFYRISGAIHATGGNILDARI 768
Query: 83 WTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 142
T D A + +S G IK + L+ + + + + + +L PP + R
Sbjct: 769 HTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQAIEDAATSHIRSSNKLAALRPP-LFWR 827
Query: 143 ERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDI 201
+ H VE P V + N D +TVI + ++DRP LL D+
Sbjct: 828 GKAFH------------------VE-----PLVFIDNQASDRFTVIEVNAQDRPALLHDL 864
Query: 202 VCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
C L + + + + T A FY+
Sbjct: 865 GCALFNARLTISSAHIATYGERAVDVFYV 893
>gi|150395259|ref|YP_001325726.1| PII uridylyl-transferase [Sinorhizobium medicae WSM419]
gi|166232254|sp|A6U5G1.1|GLND_SINMW RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|150026774|gb|ABR58891.1| metal dependent phosphohydrolase [Sinorhizobium medicae WSM419]
Length = 949
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV DTFYVTD+ G+ +
Sbjct: 852 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGSKI 897
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I R
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGSKITSENR 902
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
I L VL G D + + P GI+
Sbjct: 903 QMNIAARLKAVLAGEVDEARERM---PSGII 930
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 85/216 (39%), Gaps = 26/216 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I D P L + + A N+V A+I T +D A + + A + +R
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFSVAEDETRR 792
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
++I +L+ +VL G P I +R R + R
Sbjct: 793 AASIGKLIEDVLSGRKKL--------PDVIASRTR-----------------SKKRSRAF 827
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 828 TVTPEVTISNALSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 887
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
Y+ + G I+SE + + L+A + E E
Sbjct: 888 YVTDLVGSKITSENRQMNIAARLKAVLAGEVDEARE 923
>gi|116250174|ref|YP_766012.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. viciae 3841]
gi|6572661|gb|AAF17352.1|AF155830_1 putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
leguminosarum bv. viciae]
gi|115254822|emb|CAK05896.1| putative [Protein-PII] uridylyltransferase [Rhizobium leguminosarum
bv. viciae 3841]
Length = 968
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 169 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 110 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 138
+ + + D+ R+ A T+ +PP
Sbjct: 922 ANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|424915802|ref|ZP_18339166.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392851978|gb|EJB04499.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 968
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 169 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|190890057|ref|YP_001976599.1| PII uridylyl-transferase [Rhizobium etli CIAT 652]
gi|190695336|gb|ACE89421.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CIAT 652]
Length = 968
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 28/214 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R TI ++ +VL G +RL +++ + KA
Sbjct: 810 RAGTIGRMIEDVLSG-------------------RKRLPEVIATRTRNRKKSKAF----- 845
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 904
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 905 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|241202799|ref|YP_002973895.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240856689|gb|ACS54356.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 968
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 169 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|86356044|ref|YP_467936.1| PII uridylyl-transferase [Rhizobium etli CFN 42]
gi|86280146|gb|ABC89209.1| [protein-PII] uridylyltransferase protein [Rhizobium etli CFN 42]
Length = 944
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 846 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 891
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 98/244 (40%), Gaps = 34/244 (13%)
Query: 21 DYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNA 80
D+I+Q + + A +R+ TE I D P L + + A N+V+A
Sbjct: 702 DFIRQADKAGQALATMVRTDSFHAITE----ITVLSPDHPRLLAVIAGACAAAGANIVDA 757
Query: 81 EIWTHND-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGI 139
+I+T +D RA +HV+ A + +R TI ++ NVL G P I
Sbjct: 758 QIFTTSDGRALDTIHVSREFADDA-DELRRAGTIGRMIENVLAGRKRL--------PEVI 808
Query: 140 MNRER-RLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKL 197
R R R FD P V + N + +TVI + DRP L
Sbjct: 809 ATRTRNRKKSKAFD------------------IPPSVNITNSLSNKFTVIEVECLDRPGL 850
Query: 198 LFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257
L +I L+D+ + + T + FY+ + G IS +++R + ++A +
Sbjct: 851 LSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKRANITARMKAVMAE 910
Query: 258 RASE 261
E
Sbjct: 911 EQDE 914
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 834 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 893
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
D KR + + + D+ R+ P GI+
Sbjct: 894 DSKRANITARMKAVMAEEQDELRERM----PSGII 924
>gi|12229842|sp|Q9RAE4.2|GLND_RHILV RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 944
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 846 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 891
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 727 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 785
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 786 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 818
Query: 169 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 819 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 878
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 879 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 914
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 834 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 893
Query: 106 DPKRLSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 138
D KR + + + D+ R+ A T+ +PP
Sbjct: 894 DSKRANITARMKAVMAEEEDELRERMPSGIIAPAATARTPPA 935
>gi|398998506|ref|ZP_10701279.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
gi|398120211|gb|EJM09878.1| (protein-PII) uridylyltransferase [Pseudomonas sp. GM21]
Length = 900
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LEL DR GLL+ I IF E LS+K A+I+T+G +V+D F++TD + + DP +
Sbjct: 817 LELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFITDANNHQLSDPLLCSR 876
Query: 324 IRRQI 328
++ I
Sbjct: 877 LQDAI 881
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E T DRPGL + + + + ++ NA+I T +R V +TD + + + DP
Sbjct: 815 TVLELTAPDRPGLLARIGTIFLEFDLSLKNAKIATLGERVEDVFFITD-ANNHQLSDPLL 873
Query: 110 LSTIKELLFNVL 121
S +++ + + L
Sbjct: 874 CSRLQDAIVDQL 885
>gi|209547642|ref|YP_002279559.1| PII uridylyl-transferase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209533398|gb|ACI53333.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 968
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 169 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|56551662|ref|YP_162501.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis ZM4]
gi|81355226|sp|Q5NPH0.1|GLND_ZYMMO RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|56543236|gb|AAV89390.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis ZM4]
Length = 926
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 26/209 (12%)
Query: 23 IQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 82
+QQ ++TD S S+ MP + T I D PG F + + N+++A I
Sbjct: 710 MQQIIDTD-SKGQSISVRGHEMPAYDATMISLYAIDHPGFFYRISGAIHATGGNILDARI 768
Query: 83 WTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 142
T D A + +S G IK + L+ + + + + + +L PP + R
Sbjct: 769 HTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQAIEDAATSHIRSSNKLAALRPP-LFWR 827
Query: 143 ERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDI 201
+ H VE P V + N D +TVI + ++DRP LL D+
Sbjct: 828 GKAFH------------------VE-----PLVFIDNQASDRFTVIEVNAQDRPALLHDL 864
Query: 202 VCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
C L + + + + T A FY+
Sbjct: 865 GCALFNARLTISSAHIATYGERAVDVFYV 893
>gi|424888942|ref|ZP_18312545.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174491|gb|EJC74535.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 968
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 94/216 (43%), Gaps = 32/216 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R +TI ++ +VL G +RL +++ +A R ++
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRRKN 842
Query: 169 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 938
>gi|424873391|ref|ZP_18297053.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169092|gb|EJC69139.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 968
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 92/216 (42%), Gaps = 32/216 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFTDDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R +TI ++ +VL G +RL +++ +A R +
Sbjct: 810 RAATIGRMIEDVLSG-------------------RKRLPEVI--------ATRARNRKKS 842
Query: 169 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
K+ P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 843 KAFVIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVI 902
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + + A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMRAVMAEEEDE 938
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD D KR
Sbjct: 862 TVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISGDSKR 921
Query: 110 LSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 138
+ + + D+ R+ A T+ +PP
Sbjct: 922 ANITARMRAVMAEEEDELRERMPSGIIAPAATARTPPA 959
>gi|15964149|ref|NP_384502.1| PII uridylyl-transferase [Sinorhizobium meliloti 1021]
gi|334314799|ref|YP_004547418.1| UTP-GlnB uridylyltransferase GlnD [Sinorhizobium meliloti AK83]
gi|384528136|ref|YP_005712224.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|384534494|ref|YP_005718579.1| protein GlnD [Sinorhizobium meliloti SM11]
gi|407719238|ref|YP_006838900.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|418400279|ref|ZP_12973821.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|433612182|ref|YP_007188980.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
gi|7387710|sp|P56884.1|GLND_RHIME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|7188745|gb|AAF37852.1|AF227730_2 uridylyltransferase [Sinorhizobium meliloti]
gi|15073325|emb|CAC41833.1| Protein-PII uridylyltransferase [Sinorhizobium meliloti 1021]
gi|333810312|gb|AEG02981.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti BL225C]
gi|334093793|gb|AEG51804.1| UTP-GlnB uridylyltransferase, GlnD [Sinorhizobium meliloti AK83]
gi|336031386|gb|AEH77318.1| GlnD [Sinorhizobium meliloti SM11]
gi|359505748|gb|EHK78268.1| PII uridylyl-transferase [Sinorhizobium meliloti CCNWSX0020]
gi|407317470|emb|CCM66074.1| PII uridylyl-transferase [Sinorhizobium meliloti Rm41]
gi|429550372|gb|AGA05381.1| [Protein-PII] uridylyltransferase [Sinorhizobium meliloti GR4]
Length = 949
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV DTFYVTD+ G+ +
Sbjct: 852 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGSKI 897
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I R
Sbjct: 844 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGSKITSENR 902
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
I L VL G D + + P GI+
Sbjct: 903 QMNIAARLKAVLAGEVDEARERM---PSGII 930
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 89/216 (41%), Gaps = 26/216 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I D P L + + A N+V A+I T +D A + + A + +R
Sbjct: 733 TEITVLSPDHPRLLTVIAGACAAAGANIVGAQIHTTSDGRALDTILVNREFSVAEDETRR 792
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
++I +L+ +VL G +RL +++ RV+K R
Sbjct: 793 AASIGKLIEDVLSG-------------------RKRLPEVI---ASRTRVKK---RSRAF 827
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 828 TVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 887
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
Y+ + G I+SE + + L+A + E E
Sbjct: 888 YVTDLVGSKITSENRQMNIAARLKAVLAGEVDEARE 923
>gi|308048667|ref|YP_003912233.1| UTP-GlnB uridylyltransferase, GlnD [Ferrimonas balearica DSM 9799]
gi|307630857|gb|ADN75159.1| UTP-GlnB uridylyltransferase, GlnD [Ferrimonas balearica DSM 9799]
Length = 858
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 179 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG--MVNTGRTEAYQEFYIRHVDGL 236
++ + T + + DRP L F +V D + V H + T A F I DG
Sbjct: 670 HVTRGGTELLVYGPDRPGL-FAMVMAQLDAKRVSVHDAQIFTTRDGYALDSFVILEHDGH 728
Query: 237 PISSEAERERVIQCLEAAIE---------RRASEGLE--------------------LEL 267
PI + R+ L A+ R S L +EL
Sbjct: 729 PIQDPSRINRLRHSLNTALTKGTLTARPLRPLSRKLRSFRVPTRVQFLSSQRKNCTMMEL 788
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQ 327
T DR GLL+ I ++F LSI+ A+I+T+G K +D F + + G + P D++ R
Sbjct: 789 VTLDRPGLLAQIAQVFDRCELSIQAAKITTVGEKAEDFFMLCNPEGQALSPAEQDTLSRA 848
Query: 328 I 328
+
Sbjct: 849 L 849
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 105/258 (40%), Gaps = 46/258 (17%)
Query: 18 EVIDYIQQRLETD--ASFAPS----------------LRSSVGVMPTEEHTSIEFTGTDR 59
E ID + QRL D F+P+ + + T T + G DR
Sbjct: 626 EQIDALWQRLSADYFLRFSPAQIQWHSEMLLGRDLEAYQVHLSTHVTRGGTELLVYGPDR 685
Query: 60 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119
PGLF+ V A L +V +A+I+T D A V G+ I+DP R++ ++ L
Sbjct: 686 PGLFAMVMAQLDAKRVSVHDAQIFTTRDGYALDSFVILEHDGHPIQDPSRINRLRHSLNT 745
Query: 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
L K +L+ + R+L R + RV+ SS+
Sbjct: 746 AL--------TKGTLTARPLRPLSRKL-----------RSFRVPTRVQFLSSQ------- 779
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
K+ T++ + + DRP LL I + + + T +A F + + +G +S
Sbjct: 780 -RKNCTMMELVTLDRPGLLAQIAQVFDRCELSIQAAKITTVGEKAEDFFMLCNPEGQALS 838
Query: 240 SEAERERVIQCLEAAIER 257
AE++ + + L A+E+
Sbjct: 839 P-AEQDTLSRALVGALEQ 855
>gi|298290064|ref|YP_003692003.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
gi|296926575|gb|ADH87384.1| UTP-GlnB uridylyltransferase, GlnD [Starkeya novella DSM 506]
Length = 932
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ HT +E +G DRPGL + L+ L+ N+ +A I T +RA V +VTD G I
Sbjct: 849 SNRHTVVEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVTD-LMGAKII 907
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKA 130
R S I+ L VL D+ A
Sbjct: 908 GAARHSAIRRALLQVLDADDEANAA 932
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ DR GLL +T+ +L+I A I+T G + D FYVTD+ G KII +
Sbjct: 855 VEVSGLDRPGLLYGLTQTLSRLNLNIASAHIATFGERAVDVFYVTDLMG----AKIIGAA 910
Query: 325 R 325
R
Sbjct: 911 R 911
>gi|118591469|ref|ZP_01548866.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
gi|118435797|gb|EAV42441.1| PII uridylyl-transferase [Stappia aggregata IAM 12614]
Length = 944
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
LE+ DR GLL D+TR +L+I A IST G KV D FYVTD+TG +
Sbjct: 855 LEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDLTGQKI 906
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++++T +E +G DRPGL ++ +A L+ N+ +A I T ++ V +VTD TG I
Sbjct: 849 SDDYTVLEISGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTD-LTGQKIA 907
Query: 106 DPKRLSTIKELLFNVLRGY 124
+ R I+E L + + G+
Sbjct: 908 NIGRQEIIRERLADAVEGH 926
>gi|238007756|gb|ACR34913.1| unknown [Zea mays]
gi|414589017|tpg|DAA39588.1| TPA: hypothetical protein ZEAMMB73_464424 [Zea mays]
Length = 428
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE- 243
TV+T+ D+ L D+ + V G ++T Y F++ P++ +
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 244 -RERVIQCLEAA---------IERRASEGLE-----------LELCTEDRVGLLSDITRI 282
++R++Q A A+ GL+ L+LC DR+GLL D+TR+
Sbjct: 83 LKDRLLQLCPVAPPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLLHDVTRV 142
Query: 283 FRENSLSIKRAEISTI-GGKVKDTFYVTDVTG 313
E L+I+R ++ST G V D F++TD G
Sbjct: 143 LCELELTIRRVKVSTTPDGSVLDLFFITDARG 174
>gi|227820619|ref|YP_002824589.1| PII uridylyl-transferase [Sinorhizobium fredii NGR234]
gi|227339618|gb|ACP23836.1| [Protein-PII] uridylyltransferase [Sinorhizobium fredii NGR234]
Length = 965
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I A I+T G KV DTFYVTD+ G +
Sbjct: 868 DRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKI 913
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE G DR GL SE+ AVL+DL ++ +A I T ++ +VTD G I + R
Sbjct: 860 TVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKITNENR 918
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
I L VL G D + + P GI+
Sbjct: 919 QGNIAARLKAVLAGEVDEARERM---PSGII 946
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 86/216 (39%), Gaps = 26/216 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I D P L + + A N+V+A+I T +D A + + + +R
Sbjct: 749 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTSDGRALDTILVNREFSVDEDEMRR 808
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
++I +L+ +VL G P I +R R A R +
Sbjct: 809 AASIGKLIEDVLSGRKRL--------PEVIASRTR-----------------AKKRSKAF 843
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
+ P+VT+ N + +TVI + DR LL +I L+D+ + + T + F
Sbjct: 844 TVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEITAVLSDLSLDIASAHITTFGEKVIDTF 903
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
Y+ + G I++E + + L+A + E E
Sbjct: 904 YVTDLVGAKITNENRQGNIAARLKAVLAGEVDEARE 939
>gi|357406291|ref|YP_004918215.1| [protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
gi|351718956|emb|CCE24630.1| [Protein-PII] uridylyltransferase [Methylomicrobium alcaliphilum
20Z]
Length = 878
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+EL T D GLLS I + ++++ + A+I+TIG + +D FY TD NP+
Sbjct: 806 MELITTDHAGLLSKIGHVLNDHNIQLHDAKITTIGSRAEDMFYFTDYQSNPI 857
>gi|226494031|ref|NP_001150201.1| LOC100283831 [Zea mays]
gi|195637534|gb|ACG38235.1| amino acid binding protein [Zea mays]
gi|414589018|tpg|DAA39589.1| TPA: amino acid binding protein [Zea mays]
Length = 433
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE- 243
TV+T+ D+ L D+ + V G ++T Y F++ P++ +
Sbjct: 23 TVVTVSCPDKTGLGCDLCRAVLLFGLSVVKGDMSTDGRWCYIVFWLLPRGRRPVAVPWDL 82
Query: 244 -RERVIQCLEAA---------IERRASEGLE-----------LELCTEDRVGLLSDITRI 282
++R++Q A A+ GL+ L+LC DR+GLL D+TR+
Sbjct: 83 LKDRLLQLCPVAPPFGFGSHDAYLAAAAGLQDVPPPAPQLFLLKLCCFDRMGLLHDVTRV 142
Query: 283 FRENSLSIKRAEISTI-GGKVKDTFYVTDVTG 313
E L+I+R ++ST G V D F++TD G
Sbjct: 143 LCELELTIRRVKVSTTPDGSVLDLFFITDARG 174
>gi|421617884|ref|ZP_16058866.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
gi|409780129|gb|EKN59772.1| PII uridylyl-transferase [Pseudomonas stutzeri KOS6]
Length = 900
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP+
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPQF 873
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
T +E DRPGL + V + D +V NA+I T +R V VTD + + DP+
Sbjct: 814 QTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQPLSDPQ 872
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSL 134
+++ L L+ ++ + + +S+
Sbjct: 873 FCLRLQQALVKELQQENEQQPSPSSI 898
>gi|421588176|ref|ZP_16033492.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
gi|403707146|gb|EJZ22223.1| PII uridylyl-transferase, partial [Rhizobium sp. Pop5]
Length = 899
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 795 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 846
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 90/218 (41%), Gaps = 36/218 (16%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT----DHSTGYAI 104
T I D P L + + A N+V+A+I+T +D RA +HV+ D S
Sbjct: 682 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFPDDS----- 736
Query: 105 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 164
+ +R +TI ++ +VL G +RL +++ + KA
Sbjct: 737 DELRRAATIGRMIEDVLSG-------------------RKRLPEVIATRTRNRKKSKAF- 776
Query: 165 RVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 777 -----VIPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEK 831
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + L+A + E
Sbjct: 832 VIDTFYVTDLVGQKISGDSKRANITARLKAVMAEEEDE 869
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 789 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 848
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
D KR + L + D+ R+ P GI+
Sbjct: 849 DSKRANITARLKAVMAEEEDELRERM----PSGII 879
>gi|418295712|ref|ZP_12907562.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
gi|379067045|gb|EHY79788.1| PII uridylyl-transferase [Pseudomonas stutzeri ATCC 14405 = CCUG
16156]
Length = 900
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP+
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDAHNQPLSDPQF 873
>gi|392420714|ref|YP_006457318.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
gi|390982902|gb|AFM32895.1| PII uridylyl-transferase [Pseudomonas stutzeri CCUG 29243]
Length = 900
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP+
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPQF 873
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 77/207 (37%), Gaps = 29/207 (14%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-K 105
E T I D+ F+ A + L+ N+ +A I T + + ++ + G I
Sbjct: 702 EGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARILTSSSQFTLDTYIVLDADGSPIGN 761
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 165
+PKR+ I+ L LR DD+ P R+L F
Sbjct: 762 NPKRIEEIRSGLIAALRNPDDYLTIIQRRVP-------RQLKHFAFP------------- 801
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 224
PQVT+ N ++ T++ + + DRP LL + D V + + T
Sbjct: 802 -------PQVTIHNDTQRPQTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERV 854
Query: 225 YQEFYIRHVDGLPISSEAERERVIQCL 251
F++ D P+S R+ Q L
Sbjct: 855 EDVFFVTDADNQPLSDPQFCLRLQQAL 881
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
T +E DRPGL + V + D +V NA+I T +R V VTD + + DP+
Sbjct: 814 QTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQPLSDPQ 872
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSL 134
+++ L L+ ++ + + +S+
Sbjct: 873 FCLRLQQALVKELQQENEQQPSPSSI 898
>gi|337739621|ref|YP_004631349.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
gi|386028639|ref|YP_005949414.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336093707|gb|AEI01533.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM4]
gi|336097285|gb|AEI05108.1| [protein-PII] uridylyltransferase GlnD [Oligotropha carboxidovorans
OM5]
Length = 939
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+E +T IE +G DRPGL ++ ++ L N+ +A + T +R V +VTD G I
Sbjct: 855 SEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQIT 913
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKA 130
P R + IK L ++L D R A
Sbjct: 914 APTRQAAIKRALVHLLSNADPTRGA 938
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + SL+I A ++T G +V+D FYVTD+ G + P +
Sbjct: 861 IEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAA 920
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 921 IKRALVH 927
>gi|452747344|ref|ZP_21947141.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
gi|452008865|gb|EME01101.1| PII uridylyl-transferase [Pseudomonas stutzeri NF13]
Length = 900
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP+
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPQF 873
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
T +E DRPGL + V + D +V NA+I T +R V VTD + + DP+
Sbjct: 814 QTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQPLSDPQ 872
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSL 134
+++ L L+ ++ + + +S+
Sbjct: 873 FCLRLQQALVKELQQENEQQPSPSSI 898
>gi|431927945|ref|YP_007240979.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
gi|431826232|gb|AGA87349.1| (protein-PII) uridylyltransferase [Pseudomonas stutzeri RCH2]
Length = 900
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
LE+ DR GLL+ + ++F + LS++ A+I+T+G +V+D F+VTD P+ DP+
Sbjct: 817 LEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTDADNQPLSDPQF 873
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
T +E DRPGL + V + D +V NA+I T +R V VTD + + DP+
Sbjct: 814 QTILEIIAPDRPGLLARVGQLFLDFDLSVQNAKIATLGERVEDVFFVTD-ADNQPLSDPQ 872
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSL 134
+++ L L+ ++ + + +S+
Sbjct: 873 FCLRLQQALIKELQQENEQQPSPSSI 898
>gi|91775885|ref|YP_545641.1| PII uridylyl-transferase [Methylobacillus flagellatus KT]
gi|91709872|gb|ABE49800.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Methylobacillus
flagellatus KT]
Length = 856
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 42/64 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
L++ T DR GLLS I + +++ + + A+I+T+G +V+DTF + D +G + +++ ++
Sbjct: 789 LDIATNDRPGLLSRIAHVLQQHHIRLHTAKINTLGNRVEDTFLIADQSGQRLTAEVLAAL 848
Query: 325 RRQI 328
R +
Sbjct: 849 ERSL 852
>gi|209883288|ref|YP_002287145.1| PII uridylyl-transferase [Oligotropha carboxidovorans OM5]
gi|209871484|gb|ACI91280.1| protein-P-II uridylyltransferase [Oligotropha carboxidovorans OM5]
Length = 942
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 1/85 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+E +T IE +G DRPGL ++ ++ L N+ +A + T +R V +VTD G I
Sbjct: 858 SEVYTVIEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQIT 916
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKA 130
P R + IK L ++L D R A
Sbjct: 917 APTRQAAIKRALVHLLSNADPTRGA 941
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + SL+I A ++T G +V+D FYVTD+ G + P +
Sbjct: 864 IEVSGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAA 923
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 924 IKRALVH 930
>gi|254501628|ref|ZP_05113779.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
gi|222437699|gb|EEE44378.1| protein-P-II uridylyltransferase [Labrenzia alexandrii DFL-11]
Length = 945
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
LE+ DR GLL D+TR +L+I A IST G KV D FYVTD+TG KI +
Sbjct: 856 LEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTDLTGQ----KIANIG 911
Query: 325 RRQIGHTKLQ--VKRSTILAPKPP 346
R++I +L V+ L P P
Sbjct: 912 RQEIIRERLSAAVEGQVELDPAAP 935
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++++T +E +G DRPGL ++ +A L+ N+ +A I T ++ V +VTD TG I
Sbjct: 850 SDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVVDVFYVTD-LTGQKIA 908
Query: 106 DPKRLSTIKELLFNVLRG 123
+ R I+E L + G
Sbjct: 909 NIGRQEIIRERLSAAVEG 926
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 32/211 (15%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + D P L S + N+V+A+I T D G+A
Sbjct: 743 TELTILAQDHPRLLSVIAGACYSTGANIVDAQIDTTTD-------------GFA------ 783
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK---AVGRV 166
L TI + L G DD R+ ++ ++ R R D++ E V K GR+
Sbjct: 784 LDTI--FIGRELPGDDDERRRGERIT--ALIERTLR-----GDEQIPEPVAKKGSVRGRM 834
Query: 167 EDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
+ +V + N + DYTV+ + DRP LL+D+ ++ + + ++T +
Sbjct: 835 KAFKVASEVLLNNTLSDDYTVLEVSGLDRPGLLYDLTRSIATLNLNIGSAHISTFGEKVV 894
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIE 256
FY+ + G I++ +E + + L AA+E
Sbjct: 895 DVFYVTDLTGQKIANIGRQEIIRERLSAAVE 925
>gi|384260480|ref|YP_005415666.1| [protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
gi|378401580|emb|CCG06696.1| [Protein-PII] uridylyltransferase [Rhodospirillum photometricum DSM
122]
Length = 917
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 25/199 (12%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
D PGLFS++ +A +++A I T D A G I +P+R+ + +
Sbjct: 735 DHPGLFSKIAGAMALAGVTIMDARITTMVDGMALDTFTIQTLDGRPIAEPERIERLARTV 794
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 177
VL G +A +P RL + R + P+V +
Sbjct: 795 RGVLTGTIALARALQEQAP--------RLPE----------------RAHALTVPPRVLI 830
Query: 178 LN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
N K +TVI + +DRP L + LT + + ++T FY++ V G+
Sbjct: 831 DNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKDVFGM 890
Query: 237 PISSEAERERVIQCLEAAI 255
+ + + ++ + LEAAI
Sbjct: 891 KVVHKTKLAQIREALEAAI 909
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 23/139 (16%)
Query: 1 MDVFNVIDCDGKKIRDKEVID--------------YIQQRLETDASFAPSLRSSVGVMP- 45
+D F + DG+ I + E I+ + + L+ A P ++ V P
Sbjct: 768 LDTFTIQTLDGRPIAEPERIERLARTVRGVLTGTIALARALQEQAPRLPERAHALTVPPR 827
Query: 46 -------TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
++ HT IE G DRPG V L + + +A I T+ +R V +V D
Sbjct: 828 VLIDNQASKTHTVIEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKD- 886
Query: 99 STGYAIKDPKRLSTIKELL 117
G + +L+ I+E L
Sbjct: 887 VFGMKVVHKTKLAQIREAL 905
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR G L +T+ + I A IST G +V D FYV DV G V
Sbjct: 841 IEVNGRDRPGFLHAVTQALTRVGIQISSARISTYGERVVDVFYVKDVFGMKV 892
>gi|94500620|ref|ZP_01307150.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
gi|94427175|gb|EAT12155.1| PII uridylyl-transferase [Oceanobacter sp. RED65]
Length = 896
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 32/176 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHG-MVNTGRTEAYQEFYIRHVDGLPISSEAE 243
T I + KD+P L + L + + ++ + A + + +G I+
Sbjct: 707 TQIFIYMKDQPHLFAAMTAALDQLHLNIQDARIITSANNNALDTYVVLDENGDSITDPLR 766
Query: 244 RERVIQCLEAA----------IERRASEGLE--------------------LELCTEDRV 273
E++ LE A I+RR S L+ LE+ DR
Sbjct: 767 LEKIQSTLEEALSNPESFPNLIQRRTSRQLKQFEFEPTAFISNDPYSKRTLLEVIAPDRP 826
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 328
GLL+ + ++F + +LS++ A+I T ++ D FY+TD G+P+ DP+ +++ +
Sbjct: 827 GLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYITDANGDPISDPEFCMELQQAV 882
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 82/217 (37%), Gaps = 34/217 (15%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I D+P LF+ + A L LH N+ +A I T + A +V G +I DP R
Sbjct: 707 TQIFIYMKDQPHLFAAMTAALDQLHLNIQDARIITSANNNALDTYVVLDENGDSITDPLR 766
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR--ERRLHQIMFDDRDYERVEKAVGRVE 167
L I+ L L + F P ++ R R+L Q F+ + + R
Sbjct: 767 LEKIQSTLEEALSNPESF---------PNLIQRRTSRQLKQFEFEPTAFISNDPYSKR-- 815
Query: 168 DKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
T++ + + DRP LL + D + + T
Sbjct: 816 -----------------TLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDI 858
Query: 228 FYIRHVDGLPISSE----AERERVIQCLEAAIERRAS 260
FYI +G PIS ++ V+ L +E +AS
Sbjct: 859 FYITDANGDPISDPEFCMELQQAVVNALSDQLELQAS 895
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 62/142 (43%), Gaps = 24/142 (16%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDAS---------------------FAPSLRS 39
+D + V+D +G I D ++ IQ LE S F P+ +
Sbjct: 748 LDTYVVLDENGDSITDPLRLEKIQSTLEEALSNPESFPNLIQRRTSRQLKQFEFEPT--A 805
Query: 40 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 99
+ P + T +E DRPGL + + + D + ++ A+I T +R + ++TD +
Sbjct: 806 FISNDPYSKRTLLEVIAPDRPGLLARMGKLFMDYNLSLETAKIMTEVERIDDIFYITD-A 864
Query: 100 TGYAIKDPKRLSTIKELLFNVL 121
G I DP+ +++ + N L
Sbjct: 865 NGDPISDPEFCMELQQAVVNAL 886
>gi|182680031|ref|YP_001834177.1| PII uridylyl-transferase [Beijerinckia indica subsp. indica ATCC
9039]
gi|182635914|gb|ACB96688.1| UTP-GlnB uridylyltransferase, GlnD [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 953
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID-S 323
+E+ DR GLL D+TRI + +L+I A I T G +V D FYVTD+ G + +
Sbjct: 868 IEVSGLDRTGLLYDLTRILSKANLNIGSAHIVTFGERVVDVFYVTDLHGAKITTAARQTA 927
Query: 324 IRRQI 328
+RRQI
Sbjct: 928 VRRQI 932
>gi|218508896|ref|ZP_03506774.1| PII uridylyl-transferase [Rhizobium etli Brasil 5]
Length = 227
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 124 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 175
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 89/214 (41%), Gaps = 28/214 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ A + +
Sbjct: 11 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFADDA-DELR 69
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R TI ++ +VL G R+R I R+ ++ + V
Sbjct: 70 RAGTIGRMIEDVLSG------------------RKRLPEVIATRTRNRKKSKAFV----- 106
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P V + N + +TVI + DRP LL +I L+D+ + + T +
Sbjct: 107 --IPPSVNITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDT 164
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 165 FYVTDLVGQKISGDSKRANITARMKAVMAEEEDE 198
Score = 44.7 bits (104), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +VTD
Sbjct: 118 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKISG 177
Query: 106 DPKRLSTIKELLFNVLRGYDDFRK---------AKTSLSPPG 138
D KR + + + D+ R+ A T SPP
Sbjct: 178 DSKRANITARMKAVMAEEEDELRERMPSGIIAPAATRTSPPA 219
>gi|260752753|ref|YP_003225646.1| PII uridylyl-transferase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552116|gb|ACV75062.1| UTP-GlnB uridylyltransferase, GlnD [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 926
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 84/209 (40%), Gaps = 26/209 (12%)
Query: 23 IQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEI 82
+QQ ++TD S S+ MP + T I D PG F + + N+++A I
Sbjct: 710 MQQIIDTD-SKGQSISVRGHEMPPYDATMISLYAIDHPGFFYRISGAIHATGGNILDARI 768
Query: 83 WTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 142
T D A + +S G IK + L+ + + + + + +L PP + R
Sbjct: 769 HTTRDGMAMDNLLVQNSQGGMIKSGEHLNRMMQAIEDAATSHIRSSNKLAALRPP-LFWR 827
Query: 143 ERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDI 201
+ H VE P V + N D +TVI + ++DRP LL D+
Sbjct: 828 GKAFH------------------VE-----PLVFIDNQASDRFTVIEVNAQDRPALLHDL 864
Query: 202 VCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
C L + + + + T A FY+
Sbjct: 865 GCALFNARLTISSAHIATYGERAVDVFYV 893
>gi|254448782|ref|ZP_05062239.1| protein-P-II uridylyltransferase [gamma proteobacterium HTCC5015]
gi|198261623|gb|EDY85911.1| protein-P-II uridylyltransferase [gamma proteobacterium HTCC5015]
Length = 885
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ T DR GLL+ I + F E + A+I+TIG +V D F+VTD P+ DP +I+
Sbjct: 812 VEVMTADRPGLLARIGQAFIETDTRLHNAKINTIGEQVDDIFFVTDDDNQPLSDPNVIEH 871
Query: 324 IRRQIGH 330
+++ H
Sbjct: 872 FTQRLQH 878
>gi|83647919|ref|YP_436354.1| PII uridylyl-transferase [Hahella chejuensis KCTC 2396]
gi|83635962|gb|ABC31929.1| protein-P-II uridylyltransferase [Hahella chejuensis KCTC 2396]
Length = 906
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ T DR GLL+ I I E+ + + A I+T+G +V+D F +TDV G P+ DP++ +
Sbjct: 830 MEIITPDRPGLLARIGSILLEHEVELVTARIATLGERVEDVFVLTDVDGAPLSDPELCRT 889
Query: 324 IRRQI 328
+R I
Sbjct: 890 LRDDI 894
>gi|254459661|ref|ZP_05073077.1| protein-P-II uridylyltransferase [Rhodobacterales bacterium
HTCC2083]
gi|206676250|gb|EDZ40737.1| protein-P-II uridylyltransferase [Rhodobacteraceae bacterium
HTCC2083]
Length = 922
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 35/226 (15%)
Query: 40 SVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVT 96
++ + P E+ T + F D PG+FS + LA + NVV+A +T ND A A +
Sbjct: 720 AIDIHPDEDRDATRVCFALADHPGIFSRLSGALALVGANVVDARTFTSNDGYATAAFWIQ 779
Query: 97 DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDD 153
D G + R+ +++++ L G + + I RER I FD+
Sbjct: 780 DGDDG--PYEEARIPRLRKMIEKTLSG--EVVATEAIRDRDKIKKRERAFRVPTHITFDN 835
Query: 154 RDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 213
E YT+I + ++DRP LL D+ L M +
Sbjct: 836 EGSEI-------------------------YTIIEVDTRDRPGLLHDLTRCLASMNVYIS 870
Query: 214 HGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259
++ T + FY++ + GL + +++ + + + AI + A
Sbjct: 871 SAVIATYGEQVVDTFYVKDMFGLKYHAASKQRTLEKKMREAISKGA 916
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+TR ++ I A I+T G +V DTFYV D+ G
Sbjct: 844 IEVDTRDRPGLLHDLTRCLASMNVYISSAVIATYGEQVVDTFYVKDMFG 892
>gi|338741595|ref|YP_004678557.1| [protein-PII] uridylyltransferase [Hyphomicrobium sp. MC1]
gi|337762158|emb|CCB67993.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Hyphomicrobium sp.
MC1]
Length = 932
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
LE+ DR GLL ++T + SL I A ++T G K D FYVTD+ G ++I+
Sbjct: 850 LEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTDLLGK----QVINET 905
Query: 325 RRQIGHTKLQVKRSTILAPKPPKETT 350
R+ ++L+ +IL P PK T
Sbjct: 906 RQATLRSRLR----SILDPARPKSAT 927
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E +G DRPGL E+ + L+DL ++ +A + T ++A V +VTD G + + R
Sbjct: 848 TVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKAVDVFYVTD-LLGKQVINETR 906
Query: 110 LSTIKELLFNVL 121
+T++ L ++L
Sbjct: 907 QATLRSRLRSIL 918
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 166 VEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 224
VE + P+V + N D TV+ + +DRP LL+++ L+D+ + V T +A
Sbjct: 828 VEAFTVEPEVVINNALSDRLTVLEVSGRDRPGLLYELTSALSDLSLDISSAHVTTFGEKA 887
Query: 225 YQEFYIRHVDGLPISSEAE----RERVIQCLEAAIERRASE 261
FY+ + G + +E R R+ L+ A + A+E
Sbjct: 888 VDVFYVTDLLGKQVINETRQATLRSRLRSILDPARPKSATE 928
>gi|294013488|ref|YP_003546948.1| [protein-PII] uridylyltransferas [Sphingobium japonicum UT26S]
gi|292676818|dbj|BAI98336.1| [protein-PII] uridylyltransferas [Sphingobium japonicum UT26S]
Length = 919
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 34/230 (14%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
P T + D PGLF + + N+++A I T D A + G A
Sbjct: 723 PQRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 105 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 164
P +L+ I++ + + L NR R + ++ + R R
Sbjct: 783 HSPDQLTRIRKAIEDSL------------------ANRHRMITKL--EARPLPRTRAEAF 822
Query: 165 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
R+E P V + N + +TVI + ++DRP LLF + L + V V T
Sbjct: 823 RIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGER 877
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRV 273
A FY+ + I S+A +Q L ERR E E+ +RV
Sbjct: 878 AVDTFYVTDLLAGKIESKAR----LQTL----ERRLLEAAGGEVAELERV 919
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 33/172 (19%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPIS 239
++ T++T+ + D P L + I + + ++T R A F ++ G
Sbjct: 724 QRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAFH 783
Query: 240 SE--------------AERERVIQCLEA-----------------AIERRASEGLE-LEL 267
S A R R+I LEA I+ +AS +E+
Sbjct: 784 SPDQLTRIRKAIEDSLANRHRMITKLEARPLPRTRAEAFRIEPNVLIDNKASNRFTVIEV 843
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
DR LL + ++ +++ A ++T G + DTFYVTD+ ++ K
Sbjct: 844 NARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVTDLLAGKIESK 895
>gi|404493132|ref|YP_006717238.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Pelobacter carbinolicus DSM 2380]
gi|77545196|gb|ABA88758.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Pelobacter carbinolicus DSM 2380]
Length = 906
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 28/213 (13%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
P +T + D PGLF+ + V+A N+ A+I+T D A + +GYA
Sbjct: 713 PDGFYTQLTIVTHDMPGLFTMITGVMAAYGINIFGAQIFTQRDGTAFDILQVKGPSGYAD 772
Query: 105 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 164
++ T++E L V+ G L ++ + +R + + D + +V
Sbjct: 773 ATSEKWRTVEESLLAVIEG---------RLKVEDLIRKRQR--PVFWADAGHPKVP---- 817
Query: 165 RVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
+V + N + +DYTV+ + + D +L+ I TL D+ + ++T +
Sbjct: 818 --------SRVDIDNEVSQDYTVLDVFTHDEVGVLYRICRTLRDLGLYLGVAKISTKVDQ 869
Query: 224 AYQEFYIRHVDGLPISS----EAERERVIQCLE 252
FY++ + I+ E R +++ CL+
Sbjct: 870 VADTFYVKDIFSQKITDPDRMEEVRSQLLNCLD 902
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
L++ T D VG+L I R R+ L + A+IST +V DTFYV D+ + DP ++
Sbjct: 833 LDVFTHDEVGVLYRICRTLRDLGLYLGVAKISTKVDQVADTFYVKDIFSQKITDPDRMEE 892
Query: 324 IRRQI 328
+R Q+
Sbjct: 893 VRSQL 897
>gi|339505073|ref|YP_004692493.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
gi|338759066|gb|AEI95530.1| (protein-PII) uridylyltransferase GlnD [Roseobacter litoralis Och
149]
Length = 925
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 31/207 (14%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F +D PG+F+ + LA + NVV+A +T D + + G D RL +
Sbjct: 740 FVMSDHPGIFARLAGALALVGANVVDARSYTTKDGLVTDAYWIQDADGNPY-DVSRLPRL 798
Query: 114 KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRVEDKS 170
++++ L G + + S + RER I FD+ E
Sbjct: 799 RKMIERTLMG--EVVTTEAMKSRDKVKKRERAFKVPTHITFDNEGSE------------- 843
Query: 171 SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
YT+I + ++DRP LL D+ TL + + + ++ T + FY+
Sbjct: 844 ------------IYTIIEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYV 891
Query: 231 RHVDGLPISSEAERERVIQCLEAAIER 257
+ + GL S +++ + + L AIE+
Sbjct: 892 KDMFGLKYYSASKQRTLERRLRTAIEQ 918
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R E+++ I A I+T G +V DTFYV D+ G
Sbjct: 848 IEVDTRDRPGLLHDLARTLAESNVYIANAVIATYGEQVVDTFYVKDMFG 896
>gi|398349930|ref|YP_006395394.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
gi|390125256|gb|AFL48637.1| [protein-PII] uridylyltransferase GlnD [Sinorhizobium fredii USDA
257]
Length = 971
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV DTFYVTD+ G +
Sbjct: 874 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKI 919
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I + R
Sbjct: 866 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKITNENR 924
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
+ I L VL G D + + P GI+
Sbjct: 925 QANIAARLKAVLAGEVDEARERM---PSGII 952
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 85/216 (39%), Gaps = 26/216 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I D P L + + A N+V+A+I T D A + + + +R
Sbjct: 755 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTADGRALDTILVNREFSVDEDETRR 814
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
++I +L+ +VL G P I +R R A R +
Sbjct: 815 AASIGKLIEDVLSGRKRL--------PEVIASRTR-----------------ARKRSKAF 849
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 850 TVTPEVTISNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 909
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
Y+ + G I++E + + L+A + E E
Sbjct: 910 YVTDLVGAKITNENRQANIAARLKAVLAGEVDEARE 945
>gi|414164976|ref|ZP_11421223.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
gi|410882756|gb|EKS30596.1| [protein-PII] uridylyltransferase [Afipia felis ATCC 53690]
Length = 943
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 13 KIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLAD 72
KIR E + Q D F + ++ +T IE TG DRPGL ++ ++
Sbjct: 826 KIRLPETVAKRTQTRTKDKVFVVEPEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISK 885
Query: 73 LHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKA 130
L N+ +A + T +R V +VTD G I P R + IK L ++L D R A
Sbjct: 886 LSLNIGSAHVATFGERVRDVFYVTD-LMGAQITAPTRQAAIKRALVHLLANPDVARGA 942
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + SL+I A ++T G +V+D FYVTD+ G + P +
Sbjct: 865 IEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAA 924
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 925 IKRALVH 931
>gi|378824627|ref|YP_005187359.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
gi|365177679|emb|CCE94534.1| PII uridylyl-transferase [Sinorhizobium fredii HH103]
Length = 971
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV DTFYVTD+ G +
Sbjct: 874 DRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTDLVGAKI 919
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 4/91 (4%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE G DR GL SEV AVL+DL ++ +A I T ++ +VTD G I + R
Sbjct: 866 TVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTFYVTD-LVGAKITNENR 924
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
I L VL G D + + P GI+
Sbjct: 925 QINIAARLKAVLAGEVDEARERM---PSGII 952
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 26/216 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I D P L + + A N+V+A+I T +D A + + + +R
Sbjct: 755 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIHTTSDGRALDTILVNREFSVDEDEMRR 814
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
++I +L+ +VL G P I +R R A R +
Sbjct: 815 AASIGKLIEDVLSGRKRL--------PEVIASRTR-----------------AKKRSKAF 849
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
+ P+VT+ N + +TVI + DR LL ++ L+D+ + + T + F
Sbjct: 850 TVTPEVTLSNTLSNKFTVIEVEGLDRTGLLSEVTAVLSDLSLDIASAHITTFGEKVIDTF 909
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
Y+ + G I++E + + L+A + E E
Sbjct: 910 YVTDLVGAKITNENRQINIAARLKAVLAGEVDEARE 945
>gi|302542214|ref|ZP_07294556.1| protein-P-II uridylyltransferase [Streptomyces hygroscopicus ATCC
53653]
gi|302459832|gb|EFL22925.1| protein-P-II uridylyltransferase [Streptomyces himastatinicus ATCC
53653]
Length = 448
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ +D GLL I R L+++ A +ST+G D FYVTD TG P+ P +
Sbjct: 380 IEVRAQDIPGLLHRIGRALEAAGLTVRSAHVSTLGANAVDAFYVTDPTGAPLAPMRAAEV 439
Query: 325 RRQI 328
R++
Sbjct: 440 AREV 443
>gi|78357352|ref|YP_388801.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio alaskensis G20]
gi|78219757|gb|ABB39106.1| UTP-GlnB uridylyltransferase, GlnD [Desulfovibrio alaskensis G20]
Length = 872
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 33/207 (15%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAE--IWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 111
F D+PGLFS + VLA +V +A+ +W G + D R+S
Sbjct: 693 FAAKDQPGLFSVLTGVLALHGLDVFSADAFVWG----------------GGVVLDVFRVS 736
Query: 112 TIKELLFNVLRGYDDFRKAKTSL--SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
+ L+ D + K + S+ + G ++ + RL ++ R V+KA G
Sbjct: 737 PPPDPLY----ARDFWAKVRGSVHFALTGKLSLDFRLEEMR--SRSLSPVQKAGG----- 785
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
R +VT+ N D Y+VI + + DRP LL+DI T+ M+ + + T + F
Sbjct: 786 -GRTEVTIDNAISDFYSVIDITAPDRPVLLYDIARTMQAMRLDIQFARIATHGMQTSDSF 844
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAI 255
+R V G + E + E V Q L A+
Sbjct: 845 SVRDVFGNKLLEEQQCEEVRQALLHAV 871
>gi|163849787|ref|YP_001637830.1| PII uridylyl-transferase [Methylobacterium extorquens PA1]
gi|240136999|ref|YP_002961468.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens AM1]
gi|418060313|ref|ZP_12698231.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
gi|163661392|gb|ABY28759.1| protein-P-II uridylyltransferase [Methylobacterium extorquens PA1]
gi|240006965|gb|ACS38191.1| [Protein-PII] uridylyltransferase (PII uridylyl- transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens AM1]
gi|373566138|gb|EHP92149.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens DSM
13060]
Length = 928
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG + P R
Sbjct: 834 TVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVVQPDR 892
Query: 110 LSTIKELLFNVL 121
L+ I+ + V
Sbjct: 893 LAMIRAAVMEVF 904
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN-PVDPKIIDS 323
+E+ DR GLL ++T SL+I A ++T G + D FYVTD+TG V P +
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVVQPDRLAM 895
Query: 324 IRRQI 328
IR +
Sbjct: 896 IRAAV 900
>gi|405377530|ref|ZP_11031471.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
gi|397325967|gb|EJJ30291.1| (protein-PII) uridylyltransferase [Rhizobium sp. CF142]
Length = 963
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS++T + + SL I+ A I+T G KV DTFYVTD+ G +
Sbjct: 864 IEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVIDTFYVTDLVGQKI 915
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 89/216 (41%), Gaps = 32/216 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T +D RA +HV+ + +
Sbjct: 751 TEITVLSPDHPRLLAVIAGACAAAGANIVDAQIFTTSDGRALDTIHVSREFPNDE-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R TI ++ +VL G +RL ++ +A R +
Sbjct: 810 RAGTIGRMIEDVLSG-------------------RKRLPDVI--------ATRAKNRKKS 842
Query: 169 KSS--RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
K+ P V + N + +TVI + DRP LL ++ L+D+ + + T +
Sbjct: 843 KAFIIPPSVAITNSLSNKFTVIEVECLDRPGLLSEMTAVLSDLSLDIQSARITTFGEKVI 902
Query: 226 QEFYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G IS +++R + ++A + E
Sbjct: 903 DTFYVTDLVGQKISGDSKRANITARMKAVMAEEQDE 938
>gi|254558851|ref|YP_003065946.1| [Protein-PII] uridylyltransferase [Methylobacterium extorquens DM4]
gi|254266129|emb|CAX21881.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Methylobacterium
extorquens DM4]
Length = 928
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG + P R
Sbjct: 834 TVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVVQPDR 892
Query: 110 LSTIKELLFNVL 121
L+ I+ + V
Sbjct: 893 LAMIRAAVMEVF 904
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN-PVDPKIIDS 323
+E+ DR GLL ++T SL+I A ++T G + D FYVTD+TG V P +
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVVQPDRLAM 895
Query: 324 IRRQI 328
IR +
Sbjct: 896 IRAAV 900
>gi|358448298|ref|ZP_09158802.1| PII uridylyl-transferase [Marinobacter manganoxydans MnI7-9]
gi|357227395|gb|EHJ05856.1| PII uridylyl-transferase [Marinobacter manganoxydans MnI7-9]
Length = 881
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ T DR GLL+ I ++ E+ + + A+I+T+G +V+D F+VTD G P+ +P + +
Sbjct: 809 MEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFVTDEHGEPIREPAVCQA 868
Query: 324 IRRQI 328
+++ +
Sbjct: 869 LQQDL 873
>gi|222084682|ref|YP_002543211.1| PII uridylyl-transferase [Agrobacterium radiobacter K84]
gi|398379620|ref|ZP_10537740.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
gi|221722130|gb|ACM25286.1| protein-P-II uridylyltransferase [Agrobacterium radiobacter K84]
gi|397722252|gb|EJK82796.1| (protein-PII) uridylyltransferase [Rhizobium sp. AP16]
Length = 971
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I A I+T G KV D+FYVTD+ G +
Sbjct: 864 IEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVTDLVGQKI 915
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 86/208 (41%), Gaps = 28/208 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTDHSTGYAIKDPK 108
T I D P L + + A N+V+A+I+T D RA +HV+ T A + +
Sbjct: 751 TEITVLSPDHPRLLTVIAGACAAAGANIVDAQIFTTADGRALDTIHVSREFTDDA-DELR 809
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
R TI ++ +VL G +RL +++ R KA
Sbjct: 810 RAGTIGRMIEDVLAG-------------------RKRLPEVIATRTKNRRKNKAF----- 845
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P VT+ N + +TVI + DR LL +I L+D+ + + T +
Sbjct: 846 -VIPPSVTISNSLSNKFTVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDS 904
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAI 255
FY+ + G IS+E +R + L+ +
Sbjct: 905 FYVTDLVGQKISNENKRANITARLKPVM 932
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE DR GL SE+ +VL+DL ++ +A I T ++ +VTD G I + +
Sbjct: 862 TVIEVECLDRTGLLSEITSVLSDLSLDIHSARITTFGEKVIDSFYVTD-LVGQKISNENK 920
Query: 110 LSTIKELLFNVLRGYDD 126
+ I L V+ G +D
Sbjct: 921 RANITARLKPVMAGEED 937
>gi|254429939|ref|ZP_05043646.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
gi|196196108|gb|EDX91067.1| protein-P-II uridylyltransferase [Alcanivorax sp. DG881]
Length = 890
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ T DR GLL+ I RIF + ++ A I+T+G + +D F++TD+ G PV DP +
Sbjct: 814 VDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQE 873
Query: 324 IRRQI 328
+++ +
Sbjct: 874 LQQTL 878
>gi|110834002|ref|YP_692861.1| PII uridylyl-transferase [Alcanivorax borkumensis SK2]
gi|110647113|emb|CAL16589.1| protein-pII uridylyltransferase [Alcanivorax borkumensis SK2]
Length = 890
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ T DR GLL+ I RIF + ++ A I+T+G + +D F++TD+ G PV DP +
Sbjct: 814 VDIQTLDRPGLLAHIGRIFMRFEILVQNARIATLGERAEDVFFITDLDGEPVSDPTLCQE 873
Query: 324 IRRQI 328
+++ +
Sbjct: 874 LQQTL 878
>gi|354598884|ref|ZP_09016901.1| UTP-GlnB uridylyltransferase, GlnD [Brenneria sp. EniD312]
gi|353676819|gb|EHD22852.1| UTP-GlnB uridylyltransferase, GlnD [Brenneria sp. EniD312]
Length = 894
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 32/186 (17%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E SS+P V + + + T I +R +DRP L + L V + T R
Sbjct: 689 LEHDSSKPLVLISHQASRGGTEIFIRCQDRPYLFATVAGELDRRNLSVHDAQIFTSRDGM 748
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAI---------ERRASEGLE---------- 264
A F + DG P++ + E LE A+ RR+S L
Sbjct: 749 AMDTFIVLEPDGSPLAQD-RHETTRYALEQALTQRDYQHPRARRSSPKLRHFSVPTEVSF 807
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
+EL D+ GLL+ I IF + +LS+ A ISTIG +V+D F + D
Sbjct: 808 LPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILADSERR 867
Query: 315 PVDPKI 320
+ P++
Sbjct: 868 ALKPEL 873
>gi|218528430|ref|YP_002419246.1| PII uridylyl-transferase [Methylobacterium extorquens CM4]
gi|218520733|gb|ACK81318.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium extorquens
CM4]
Length = 928
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E TG DRPGL E+ L L N+ +A + T +RA V +VTD TG + P R
Sbjct: 834 TVVEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVVQPDR 892
Query: 110 LSTIKELLFNVL 121
L+ I+ + V
Sbjct: 893 LAMIRAAVMEVF 904
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN-PVDPKIIDS 323
+E+ DR GLL ++T SL+I A ++T G + D FYVTD+TG V P +
Sbjct: 836 VEITGLDRPGLLYELTTGLNRLSLNITSAHVATFGERAVDVFYVTDLTGTRVVQPDRLAM 895
Query: 324 IRRQI 328
IR +
Sbjct: 896 IRAAV 900
>gi|90420550|ref|ZP_01228457.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
gi|90335278|gb|EAS49031.1| protein-P-II uridylyltransferase [Aurantimonas manganoxydans
SI85-9A1]
Length = 943
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 33 FAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAV 92
FA R SV + + T IE G DRPGL S+V ++DL+ ++ +A I T+ ++ V
Sbjct: 832 FAVKPRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDV 891
Query: 93 VHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER 144
+VTD G I R+ I+ L V F + +S P +M+ +R
Sbjct: 892 FYVTD-LIGTKITSETRIERIEVRLKRV------FESPEGEMSSPVVMSSQR 936
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLSD+T + +L I+ A IST G KV D FYVTD+ G +
Sbjct: 857 DRPGLLSDVTGAISDLNLDIRSAHISTYGEKVVDVFYVTDLIGTKI 902
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 84/205 (40%), Gaps = 35/205 (17%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
E T I D P L S + A N+ +A+I+T +D A V
Sbjct: 737 EVTEIMVLAPDHPRLLSLIAGACAGTGANIADAQIFTMSDGRALDV-------------- 782
Query: 108 KRLSTIKELLFNVLRGY----DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
+L N R + D+ R+A+ + G + + R + + +R R
Sbjct: 783 --------MLLN--REFESDEDEIRRAERICANIGKLLQGREMPASLLANRRPPR----- 827
Query: 164 GRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
E + +P+V+V N + TVI + DRP LL D+ ++D+ + ++T
Sbjct: 828 -STELFAVKPRVSVDNTLSNQLTVIEVEGLDRPGLLSDVTGAISDLNLDIRSAHISTYGE 886
Query: 223 EAYQEFYIRHVDGLPISSEAERERV 247
+ FY+ + G I+SE ER+
Sbjct: 887 KVVDVFYVTDLIGTKITSETRIERI 911
>gi|356557247|ref|XP_003546929.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 289
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 22/188 (11%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
+ T +E T DR G + L +L NVV A ++ + +T +G ++DP
Sbjct: 94 DATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDP 153
Query: 108 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 166
+ L I+ + N + Y A+ +L G++ + ++ VE A
Sbjct: 154 ELLEAIRLTILNNMIQYHPESSAQLALGAAFGLVPPKEQVD-----------VEIAT--- 199
Query: 167 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
Q+T+ + +++ + + DRP LL D+V T+TD+ V G +T A
Sbjct: 200 -------QITISDDGPKRSLLYVETADRPGLLVDLVKTITDINIAVESGEFDTEGLLAKA 252
Query: 227 EFYIRHVD 234
+F++ + D
Sbjct: 253 KFHVNYKD 260
>gi|393721067|ref|ZP_10340994.1| PII uridylyl-transferase [Sphingomonas echinoides ATCC 14820]
Length = 926
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 76/182 (41%), Gaps = 34/182 (18%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPIS 239
E+ T++T+ + D P L + I ++ + ++T R A F ++ G P
Sbjct: 732 ERGATLVTVYAADHPGLFYRIAGAISVGGGNIIDARIHTTRDGMALDNFLVQDPFGRPFD 791
Query: 240 SEAERERVIQCLEAAIERRA---------------SEGLEL-----------------EL 267
A+ R+ Q +E A+ R +E + E+
Sbjct: 792 ESAQLSRLKQAIEDALANRGKMIDRLMAKPLTRPRAEAFAIAPNVLIDNKASNRFTVIEI 851
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRR 326
DR LL + ++ ++I A ++T G + DTFY+TD+TG+ + P + +I R
Sbjct: 852 NARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLTDLTGDKIAAPSRLKTIER 911
Query: 327 QI 328
++
Sbjct: 912 RL 913
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 75/199 (37%), Gaps = 26/199 (13%)
Query: 43 VMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 102
V P T + D PGLF + ++ N+++A I T D A + G
Sbjct: 729 VYPERGATLVTVYAADHPGLFYRIAGAISVGGGNIIDARIHTTRDGMALDNFLVQDPFGR 788
Query: 103 AIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 162
+ +LS +K+ + + L NR + + ++M R E
Sbjct: 789 PFDESAQLSRLKQAIEDAL------------------ANRGKMIDRLMAKPLTRPRAEAF 830
Query: 163 VGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 221
+ P V + N + +TVI + ++DRP LL + L + + V T
Sbjct: 831 -------AIAPNVLIDNKASNRFTVIEINARDRPALLHQLAHALFQSKVTIHSAHVATYG 883
Query: 222 TEAYQEFYIRHVDGLPISS 240
A FY+ + G I++
Sbjct: 884 ERAVDTFYLTDLTGDKIAA 902
>gi|145355694|ref|XP_001422087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582327|gb|ABP00404.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 218
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 18 EVIDYIQQRLETDASFAPSL-------RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVL 70
E +YIQ + T A L ++ + P H+ +E TDRPGL +V L
Sbjct: 103 EAAEYIQAKAPTRAGGEGVLGKVKKKVQTGIKCAPERYHSKLEIETTDRPGLLVDVVRTL 162
Query: 71 ADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
DL VV+AE+ T D+A+ +++VT H G
Sbjct: 163 KDLSLCVVSAEVDTIGDKASDIIYVT-HKGG 192
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 244 RERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVK 303
+++V ++ A ER S+ LE+ T DR GLL D+ R ++ SL + AE+ TIG K
Sbjct: 126 KKKVQTGIKCAPERYHSK---LEIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGDKAS 182
Query: 304 DTFYVTDVTGNPVDPKI 320
D YVT G P+ P +
Sbjct: 183 DIIYVTH-KGGPLSPPM 198
>gi|145631865|ref|ZP_01787623.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
gi|144982521|gb|EDJ90079.1| PII uridylyl-transferase [Haemophilus influenzae R3021]
Length = 863
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 315 PVDPKIIDSIR----RQIG 329
+D + + +R R IG
Sbjct: 845 ALDSQQREILRNVLYRNIG 863
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|260582819|ref|ZP_05850605.1| protein-P-II uridylyltransferase [Haemophilus influenzae NT127]
gi|260094145|gb|EEW78047.1| protein-P-II uridylyltransferase [Haemophilus influenzae NT127]
Length = 863
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 315 PVDPKIIDSIR----RQIG 329
+D + + +R R IG
Sbjct: 845 ALDSQQREILRNVLYRNIG 863
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|163757730|ref|ZP_02164819.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
gi|162285232|gb|EDQ35514.1| PII uridylyl-transferase [Hoeflea phototrophica DFL-43]
Length = 953
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 172 RPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
RPQVT+ N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 833 RPQVTISNALSNKFTVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYV 892
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASE 261
R + G+ I++E + ++ L+A + + E
Sbjct: 893 RDLVGMKITNENRQTNIVARLKAVLAKEDDE 923
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+EL DR GLLS+IT + + SL I A I+T G KV DTFYV D+ G
Sbjct: 849 IELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVRDLVG 897
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE DRPGL SE+ +VL+DL ++ +A I T ++ +V D G I + R
Sbjct: 847 TVIELECLDRPGLLSEITSVLSDLSLDIASAHITTFGEKVVDTFYVRD-LVGMKITNENR 905
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
+ I L VL DD + + PPG++
Sbjct: 906 QTNIVARLKAVLAKEDDELRDQM---PPGMI 933
>gi|372276073|ref|ZP_09512109.1| PII uridylyl-transferase [Pantoea sp. SL1_M5]
Length = 884
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P+S + +IQ LE AI RR S L
Sbjct: 750 EPDGSPLSPD-RHPMIIQALEQAITQSEWAPPRTRRPSAKLRHFSVDTEVNFLPTHTDRR 808
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRK 868
Query: 323 SIRRQI 328
++R+++
Sbjct: 869 ALRQRL 874
>gi|407802895|ref|ZP_11149734.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
gi|407023055|gb|EKE34803.1| PII uridylyl-transferase [Alcanivorax sp. W11-5]
Length = 902
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ T DR GLL+ I R+F E L ++ A I+T+G +V+D F++T G PV DP +
Sbjct: 818 VDVQTLDRPGLLARIGRMFMEFDLLLQNARIATLGERVEDVFFITQKDGGPVTDPDLCQR 877
Query: 324 IRRQI 328
+++++
Sbjct: 878 LQQRL 882
>gi|390436901|ref|ZP_10225439.1| PII uridylyl-transferase [Pantoea agglomerans IG1]
Length = 884
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P+S + +IQ LE AI RR S L
Sbjct: 750 EPDGSPLSPD-RHPMIIQALEQAITQSEWAPPRTRRPSAKLRHFSVDTEVNFLPTHTDRR 808
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRK 868
Query: 323 SIRRQI 328
++R+++
Sbjct: 869 ALRQRL 874
>gi|86139310|ref|ZP_01057880.1| PII uridylyl-transferase [Roseobacter sp. MED193]
gi|85824154|gb|EAQ44359.1| PII uridylyl-transferase [Roseobacter sp. MED193]
Length = 937
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 84/214 (39%), Gaps = 45/214 (21%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTI 113
F D PG+F+ V LA + NVV+A +T D + G+ + RL +
Sbjct: 752 FVMADHPGIFARVSGALALVGANVVDARSYTTKDGYVTDAFWIQDADGHPF-EASRLPRL 810
Query: 114 KELLFNVLRG----------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV 163
+++ L G D F+K + + P I FD+ E
Sbjct: 811 NQMILKTLNGEVITGEALETRDKFKKREKAFKVPT---------HITFDNEGSE------ 855
Query: 164 GRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
YT+I + ++DR LL+D+ TL + + ++ T +
Sbjct: 856 -------------------IYTIIEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQ 896
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257
FY++ + GL S+++++ + + L AI +
Sbjct: 897 VVDTFYVKDMFGLKYHSKSKQDFLERKLREAISK 930
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R ++ I A I+T G +V DTFYV D+ G
Sbjct: 860 IEVDTRDRTGLLYDLARTLAGANVYIANAVIATYGEQVVDTFYVKDMFG 908
>gi|1184993|gb|AAC32290.1| putative uridylyltransferase/uridylyl-removing enzyme [Rhizobium
tropici CIAT 899]
Length = 971
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYV D+ G +
Sbjct: 864 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKI 915
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKIS 916
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
+ R + I L V+ G +D + + P GI+
Sbjct: 917 NENRRAYITARLKAVMAGEEDEMRERM---PSGII 948
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P V + N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 232 HVDGLPISSEAERERVIQCLEAAI 255
+ G IS+E R + L+A +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVM 932
>gi|440225345|ref|YP_007332436.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
gi|440036856|gb|AGB69890.1| protein-P-II uridylyltransferase [Rhizobium tropici CIAT 899]
Length = 971
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS+IT + + SL I+ A I+T G KV DTFYV D+ G +
Sbjct: 870 DRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKI 915
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I
Sbjct: 858 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKIS 916
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
+ R + I L V+ G +D + + P GI+
Sbjct: 917 NENRRAYITARLKAVMAGEEDEMRERM---PSGII 948
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P V + N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 849 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 908
Query: 232 HVDGLPISSEAERERVIQCLEAAI 255
+ G IS+E R + L+A +
Sbjct: 909 DLVGQKISNENRRAYITARLKAVM 932
>gi|333983340|ref|YP_004512550.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
gi|333807381|gb|AEG00051.1| UTP-GlnB uridylyltransferase, GlnD [Methylomonas methanica MC09]
Length = 881
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 260 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
S+ +EL T DR GLLS I + F + + + A+I+TIG + +D FYVTD P+
Sbjct: 804 SKHTTIELITTDRAGLLSTIGKAFTKLDIHLHDAKITTIGSRAEDMFYVTDQNCQPI 860
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 99
P +HT+IE TDR GL S + L ++ +A+I T RA + +VTD +
Sbjct: 802 PLSKHTTIELITTDRAGLLSTIGKAFTKLDIHLHDAKITTIGSRAEDMFYVTDQN 856
>gi|334703601|ref|ZP_08519467.1| protein-P-II uridylyltransferase [Aeromonas caviae Ae398]
Length = 880
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
LEL D GLL+ I +F++ LS+ A+I+TIG +V+D F +T + G P++P+
Sbjct: 803 LELTALDTPGLLARIGAVFQQCGLSLHAAKITTIGERVEDFFSLTTLAGEPLNPE 857
>gi|148825740|ref|YP_001290493.1| PII uridylyl-transferase [Haemophilus influenzae PittEE]
gi|229847338|ref|ZP_04467440.1| PII uridylyl-transferase [Haemophilus influenzae 7P49H1]
gi|166226151|sp|A5UBF9.1|GLND_HAEIE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148715900|gb|ABQ98110.1| PII uridylyl-transferase [Haemophilus influenzae PittEE]
gi|229809763|gb|EEP45487.1| PII uridylyl-transferase [Haemophilus influenzae 7P49H1]
Length = 863
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKAGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+ GL ++V + ++L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKAGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|323137182|ref|ZP_08072261.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
gi|322397540|gb|EFY00063.1| UTP-GlnB uridylyltransferase, GlnD [Methylocystis sp. ATCC 49242]
Length = 938
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
+T IE +G DR GL ++ ++ L+ N+ +A I T +RA +VTD TG I P+
Sbjct: 850 YTVIEVSGLDREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVTD-LTGAKIIAPQ 908
Query: 109 RLSTIKELLFNVLRGYDDFRKAK 131
R +TIK L V + + R A+
Sbjct: 909 RQATIKRQLLEVFQPSAEKRPAR 931
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 11/119 (9%)
Query: 221 RTEAYQEFYIRHVDGLPISSEAERERV-----IQCLEAAIERRASEGLE-----LELCTE 270
R EF R + G I S+A + R I A E L +E+
Sbjct: 799 RARRIAEFIARALRGEVIVSDAVKARATTIKPIAAFTIAPEVVVDNSLSNVYTVIEVSGL 858
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDSIRRQI 328
DR GLL D+T + +L+I A I T G + D FYVTD+TG + P+ +I+RQ+
Sbjct: 859 DREGLLFDLTNAISKLNLNIASAHIVTFGERAVDAFYVTDLTGAKIIAPQRQATIKRQL 917
>gi|7387711|sp|Q53245.2|GLND_RHITR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
Length = 948
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLLS+IT + + SL I+ A I+T G KV DTFYV D+ G +
Sbjct: 841 IEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVADLVGQKI 892
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+ + T IE DRPGL SE+ AVL+DL ++ +A I T ++ +V D G I
Sbjct: 835 SNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVAD-LVGQKIS 893
Query: 106 DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
+ R + I L V+ G +D + + P GI+
Sbjct: 894 NENRRAYITARLKAVMAGEEDEMRERM---PSGII 925
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P V + N + +TVI + DRP LL +I L+D+ + + T + FY+
Sbjct: 826 PSVIITNSLSNKFTVIEVECLDRPGLLSEITAVLSDLSLDIQSARITTFGEKVIDTFYVA 885
Query: 232 HVDGLPISSEAERERVIQCLEAAI 255
+ G IS+E R + L+A +
Sbjct: 886 DLVGQKISNENRRAYITARLKAVM 909
>gi|357386406|ref|YP_004901130.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
gi|351595043|gb|AEQ53380.1| (protein-PII) uridylyltransferase [Pelagibacterium halotolerans B2]
Length = 929
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 8/79 (10%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ DR GLL +TR + +L+I A I T G K D FYVTD+TG KI +
Sbjct: 851 IEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTDLTGG----KITSKV 906
Query: 325 RRQIGHTKLQVKRSTILAP 343
R++ H L+ + AP
Sbjct: 907 RQKRIHEALE----AVFAP 921
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+++ T IE +G DR GL + L+DL+ + +A I T+ ++A V +VTD TG I
Sbjct: 845 SDKFTVIEISGLDRTGLLYHLTRALSDLNLTIGSAHIGTYGEKAVDVFYVTD-LTGGKIT 903
Query: 106 DPKRLSTIKELL 117
R I E L
Sbjct: 904 SKVRQKRIHEAL 915
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 89/225 (39%), Gaps = 38/225 (16%)
Query: 36 SLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 95
S S + E T + F D P L S + +++ A+I+ D
Sbjct: 724 SFAGSTSIKAFEGITEVTFYTPDHPRLLSLIAGACTTADASIIGAQIFNTKD-------- 775
Query: 96 TDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGI-MNRERRLHQIMFDDR 154
GYA+ D RL R+A TS I +R + + + + R
Sbjct: 776 -----GYAL-DTFRL-----------------RRAFTSDEDEKIRASRITDMVKALLEGR 812
Query: 155 DYERVEKAVGRVEDKSSRP-----QVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDM 208
Y + V ++ +P ++ + N D +TVI + DR LL+ + L+D+
Sbjct: 813 KYLPADLGVDSRYNRRLKPFSVPTEIFISNALSDKFTVIEISGLDRTGLLYHLTRALSDL 872
Query: 209 QYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 253
+ + T +A FY+ + G I+S+ ++R+ + LEA
Sbjct: 873 NLTIGSAHIGTYGEKAVDVFYVTDLTGGKITSKVRQKRIHEALEA 917
>gi|378697957|ref|YP_005179915.1| uridylyltransferase [Haemophilus influenzae 10810]
gi|301170473|emb|CBW30080.1| uridylyltransferase [Haemophilus influenzae 10810]
Length = 863
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNRFGQ 844
Query: 315 PVDPKIIDSIR----RQIG 329
+D + + +R R IG
Sbjct: 845 ALDSQQREILRNVLYRNIG 863
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNR-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|341613492|ref|ZP_08700361.1| PII uridylyl-transferase [Citromicrobium sp. JLT1363]
Length = 918
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 77/179 (43%), Gaps = 34/179 (18%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPIS 239
E+ T++T+ + D P + I + + + ++T RT A F ++ G
Sbjct: 722 ERGATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGQRFG 781
Query: 240 SEAERERVIQCLEAAIER---------------RASEGLE-----------------LEL 267
+ + ER+ + + A+ER R + + +E+
Sbjct: 782 EDNQLERIERSIADALERGAQLVPKLAQRPLPRRGAGAFDVRPSVAFDNDASHRFTVIEV 841
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIR 325
DR LL+ + R E+ I+ A I+ G + DTFYVTD+TG+ + DP +++IR
Sbjct: 842 SARDRPALLNRLARALFEHHAMIRSAHITHYGERAADTFYVTDLTGDKITDPSRLETIR 900
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 15 RDKEVIDYIQQR-LETDASFAPSLRSSVGVMPTEEH--TSIEFTGTDRPGLFSEVCAVLA 71
R +++ + QR L + A +R SV H T IE + DRP L + + L
Sbjct: 799 RGAQLVPKLAQRPLPRRGAGAFDVRPSVAFDNDASHRFTVIEVSARDRPALLNRLARALF 858
Query: 72 DLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120
+ H + +A I + +RAA +VTD TG I DP RL TI+ L +
Sbjct: 859 EHHAMIRSAHITHYGERAADTFYVTD-LTGDKITDPSRLETIRAALVDA 906
>gi|114571561|ref|YP_758241.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
gi|114342023|gb|ABI67303.1| UTP-GlnB uridylyltransferase, GlnD [Maricaulis maris MCS10]
Length = 936
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 33/177 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSE-- 241
T + + S DR ++ DIV ++ V +NT + + + FYI+ G P
Sbjct: 731 TEVMIWSPDRERVFADIVAAFAEVGADVVGATINTTTSRQVFDIFYIQDAAGQPYGKHDA 790
Query: 242 AERERVIQCL------EAAIERRASEGLE------------------------LELCTED 271
+R+ ++ L E + RR + L+ +E D
Sbjct: 791 VQRQALVGYLREVATGEVTVRRRPAAPLKRRDAAFRVTPSVTISNEIAEQATVIEASGRD 850
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 328
R GLL+D+ + + L++ A+I G + D FYVT VD I +S+R +
Sbjct: 851 RPGLLADLADVLADEGLALTSAQIDGYGERATDVFYVTHKDEKLVDEAISESVRNGL 907
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 30 DASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 89
DA+F + ++ E+ T IE +G DRPGL +++ VLAD + +A+I + +RA
Sbjct: 822 DAAFRVTPSVTISNEIAEQATVIEASGRDRPGLLADLADVLADEGLALTSAQIDGYGERA 881
Query: 90 AAVVHVT 96
V +VT
Sbjct: 882 TDVFYVT 888
>gi|404317041|ref|ZP_10964974.1| PII uridylyl-transferase [Ochrobactrum anthropi CTS-325]
Length = 934
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 1/92 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 123
+VTD G+ I + R I+ L VL G
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIRRKLLGVLSG 919
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
>gi|170749943|ref|YP_001756203.1| PII uridylyl-transferase [Methylobacterium radiotolerans JCM 2831]
gi|170656465|gb|ACB25520.1| UTP-GlnB uridylyltransferase, GlnD [Methylobacterium radiotolerans
JCM 2831]
Length = 935
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E TG DRPGL E+ + L N+ +A + T +RA V +VTD TG + P R
Sbjct: 841 TVVEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVTD-LTGTRVTQPDR 899
Query: 110 LSTIKELLFNVL 121
+ I+ + +V
Sbjct: 900 QAAIRAAVMDVF 911
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN---------P 315
+E+ DR GLL ++T F SL+I A ++T G + D FYVTD+TG
Sbjct: 843 VEITGLDRPGLLYELTTAFSRLSLNITSAHVATFGERAVDVFYVTDLTGTRVTQPDRQAA 902
Query: 316 VDPKIIDSIRRQIGHTKLQVKRSTILAPKPPKET 349
+ ++D + K + + + AP PP+E
Sbjct: 903 IRAAVMDVFAHDVATLKAEGLEALVAAP-PPREA 935
>gi|153007502|ref|YP_001368717.1| PII uridylyl-transferase [Ochrobactrum anthropi ATCC 49188]
gi|166232253|sp|A6WV84.1|GLND_OCHA4 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|151559390|gb|ABS12888.1| metal dependent phosphohydrolase [Ochrobactrum anthropi ATCC 49188]
Length = 934
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 110 LSTIKELLFNVLRG 123
I+ L VL G
Sbjct: 906 QGNIRRKLLGVLSG 919
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
>gi|374986229|ref|YP_004961724.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
gi|297156881|gb|ADI06593.1| PII uridylyl-transferase [Streptomyces bingchenggensis BCW-1]
Length = 883
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ +D GLL I R + ++++ A +ST+G D FYVTD +G P+ P +
Sbjct: 814 IEVRAQDAPGLLHRIGRALEDAGVTVRSAHVSTLGANAVDAFYVTDASGAPLQPMRAAEV 873
Query: 325 RRQIGHT 331
+++ T
Sbjct: 874 AKEVERT 880
>gi|304312446|ref|YP_003812044.1| PII uridylyl-transferase [gamma proteobacterium HdN1]
gi|301798179|emb|CBL46401.1| PII uridylyl-transferase (Uridylyl-removing enzyme) [gamma
proteobacterium HdN1]
Length = 902
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
L++ T DR GLL++I +IF + + I+ A+I+T G + +D FY+TD G + DP+ +
Sbjct: 830 LDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITDTNGEMLHDPEFCAT 889
Query: 324 IRRQI 328
++ ++
Sbjct: 890 LKERL 894
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T ++ T DRPGL +E+ + + A+I T +RA V ++TD + G + DP+
Sbjct: 828 TVLDITTLDRPGLLAEIGKIFVASGVLIQGAKIATFGERAEDVFYITD-TNGEMLHDPEF 886
Query: 110 LSTIKELL 117
+T+KE L
Sbjct: 887 CATLKERL 894
>gi|319789629|ref|YP_004151262.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
gi|317114131|gb|ADU96621.1| UTP-GlnB uridylyltransferase, GlnD [Thermovibrio ammonificans HB-1]
Length = 874
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ T DR+G+L IT++ E ++RA I+T G +V D+FY+TD+ V DP+ +
Sbjct: 802 VEVSTHDRLGVLYTITKVLLEEQTRLRRAIITTEGNRVIDSFYITDMDYKKVTDPQKLLR 861
Query: 324 IRRQIGHTKLQVKRSTILAPKP 345
I+ +I L+PKP
Sbjct: 862 IKERIVEA---------LSPKP 874
>gi|116786655|gb|ABK24191.1| unknown [Picea sitchensis]
gi|148908416|gb|ABR17321.1| unknown [Picea sitchensis]
Length = 306
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 22/184 (11%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E T DR G + L DL NVV A ++ + +T TG + DP+
Sbjct: 113 TVVEVTFGDRLGALLDTMGALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
L I+ + N L Y A+ ++ GI+ + + D D R+
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEK------PDVDIST------RIHI 220
Query: 169 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P ++L+IE + DRP LL +IV TL+D+ V G +T A +F
Sbjct: 221 YDDGPNRSLLSIE---------TADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKF 271
Query: 229 YIRH 232
++ +
Sbjct: 272 HVSY 275
>gi|284992396|ref|YP_003410950.1| UTP-GlnB uridylyltransferase, GlnD [Geodermatophilus obscurus DSM
43160]
gi|284065641|gb|ADB76579.1| UTP-GlnB uridylyltransferase, GlnD [Geodermatophilus obscurus DSM
43160]
Length = 791
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 34/211 (16%)
Query: 40 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 99
+VGV + + G DR GLFS++ VLA +V A++ DRA AV
Sbjct: 588 AVGVEDVADGQQVTIVGPDRHGLFSQLAGVLALNQLDVRAAKVNVVGDRATAV------- 640
Query: 100 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERV 159
+A++ + + +L + +R + G + RL Q R+ +
Sbjct: 641 --FAVRPRFGRAPVASILADAVRAALE-----------GTLPLAERLRQ-----READYR 682
Query: 160 EKAVGRVEDKSSRPQVTVLNIE--KDYT-VITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 216
+ AV +++ P+++ N E D T ++ +R+ DR LL+ + L V
Sbjct: 683 QDAV-----RATPPRISWHNGEVTGDATGIVEVRAGDRAGLLYRLTAALATEGLDVTSAR 737
Query: 217 VNTGRTEAYQEFYIRHVDGLPISSEAERERV 247
+ T +A FY+ + G PI SE +R RV
Sbjct: 738 IETLGADAADHFYVCNPSGEPIGSE-QRSRV 767
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL +T L + A I T+G D FYV + +G P+
Sbjct: 708 VEVRAGDRAGLLYRLTAALATEGLDVTSARIETLGADAADHFYVCNPSGEPI 759
>gi|296533888|ref|ZP_06896417.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
gi|296265785|gb|EFH11881.1| protein-P-II uridylyltransferase [Roseomonas cervicalis ATCC 49957]
Length = 934
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 31/219 (14%)
Query: 28 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH-N 86
E +AS AP L + V+ T + +D PGLFS + LA +V+A I T N
Sbjct: 721 EAEASGAP-LSVATRVLEARAVTEVTVYCSDHPGLFSRIAGALAVAGATIVDARIHTMTN 779
Query: 87 DRAAAVVHVTDH---STGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRE 143
A V D G A +L+ + L+ L G
Sbjct: 780 GMALDTFWVQDAQPGGAGGAFDASHKLARLSVLIEQALSG-------------------- 819
Query: 144 RRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIV 202
RL+ + ++ +V + R+ +V + N + +TVI + +DRP LL D+
Sbjct: 820 -RLNLV----QEIRKVRREPARLRAVQVPGRVVIDNFASNTHTVIELNGRDRPGLLHDVT 874
Query: 203 CTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 241
+++ + + T A FY++ V GL + ++
Sbjct: 875 AAISEQGLQIASAHITTYGVRAVDVFYVKDVFGLKVEND 913
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+EL DR GLL D+T E L I A I+T G + D FYV DV G V+
Sbjct: 859 IELNGRDRPGLLHDVTAAISEQGLQIASAHITTYGVRAVDVFYVKDVFGLKVE 911
>gi|451982313|ref|ZP_21930631.1| putative (Protein-PII) uridylyltransferase [Nitrospina gracilis
3/211]
gi|451760478|emb|CCQ91915.1| putative (Protein-PII) uridylyltransferase [Nitrospina gracilis
3/211]
Length = 906
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD------ 317
EL +CT D+ GLL I + N LSI A + T+ V D F V TG+PVD
Sbjct: 712 ELVVCTRDQQGLLYKIAAVLAFNHLSIIEANVHTLDDNVFDIFKVVSATGDPVDFSNFFF 771
Query: 318 --PKIIDSIRR 326
++ID +RR
Sbjct: 772 IQKQVIDDLRR 782
>gi|399544195|ref|YP_006557503.1| [protein-PII] uridylyltransferase [Marinobacter sp. BSs20148]
gi|399159527|gb|AFP30090.1| [Protein-PII] uridylyltransferase [Marinobacter sp. BSs20148]
Length = 881
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ T DR GLL+ I ++ E+ + + A+I+T+G +V+D F+VTD GN + DP +
Sbjct: 809 LEVITPDRPGLLARIGQVLLEHKVRLTTAKIATLGERVEDVFFVTDENGNALCDPAACQA 868
Query: 324 IR 325
++
Sbjct: 869 LQ 870
>gi|451947389|ref|YP_007467984.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
gi|451906737|gb|AGF78331.1| (protein-PII) uridylyltransferase [Desulfocapsa sulfexigens DSM
10523]
Length = 855
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH--VTDHSTGYAIKDPKRLSTIKE 115
DR GL +++C VL + +V+NA+I+T D +A + + + Y KD + ++
Sbjct: 674 DRRGLLAKICGVLGLHNLSVLNAQIFTWKDGSAVDILDVLPEDGVEYEEKDWQAINDDLN 733
Query: 116 LLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQV 175
L N H++ R Y+++ +GR + + ++
Sbjct: 734 LALN---------------------------HRLGLGHRLYKKLSSGIGRAKRSTGTNEI 766
Query: 176 TVLNIEK---DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI 230
V+ K +YTV+ + S D P L+ I TL D ++ + T + FY+
Sbjct: 767 RVVVDNKASDNYTVVEVYSDDSPGQLYRITQTLADFGINIYRAFIATEVEQLIDVFYV 824
>gi|399071685|ref|ZP_10750077.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
gi|398043201|gb|EJL36128.1| (protein-PII) uridylyltransferase [Caulobacter sp. AP07]
Length = 962
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 63/161 (39%), Gaps = 33/161 (20%)
Query: 187 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAER- 244
I + +KDR L D+ ++ + V V T R +A F+++ V G P+ E R
Sbjct: 760 IVVAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFHVQDVTGAPLGCENPRA 819
Query: 245 -ERVIQCLEAA-----------------------------IERRAS-EGLELELCTEDRV 273
R+ LEAA ++ AS E +E DR
Sbjct: 820 LRRMADALEAAGRGEPLVMEPRRGGEQSRTAAFSIAPTVVVDNEASNEATVVEASGRDRP 879
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
GLL + R +N LSI+ A I G + D FYV G
Sbjct: 880 GLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQTSEGG 920
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 33/202 (16%)
Query: 39 SSVGVMPTEEHTS-IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT-HNDRAAAVVHVT 96
++ G +P + + I DR GLF+++ ++ L NVV A ++T +A V HV
Sbjct: 746 AAEGRVPAGANAAEIVVAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFHVQ 805
Query: 97 DHSTGYAI--KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDR 154
D TG + ++P+ L + + L RG P +M R Q
Sbjct: 806 D-VTGAPLGCENPRALRRMADALEAAGRG------------EPLVMEPRRGGEQ------ 846
Query: 155 DYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 213
R S P V V N + TV+ +DRP LL + TL D +
Sbjct: 847 ---------SRTAAFSIAPTVVVDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQ 897
Query: 214 HGMVNTGRTEAYQEFYIRHVDG 235
++ A FY++ +G
Sbjct: 898 SAHIDGYGERAVDAFYVQTSEG 919
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 1 MDVFNVIDCDGKKI--RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPT- 46
+DVF+V D G + + + + LE P S ++ + PT
Sbjct: 799 LDVFHVQDVTGAPLGCENPRALRRMADALEAAGRGEPLVMEPRRGGEQSRTAAFSIAPTV 858
Query: 47 -------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 99
E T +E +G DRPGL + LAD ++ +A I + +RA +V S
Sbjct: 859 VVDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQT-S 917
Query: 100 TGYAIKDPKRLSTIKELLFNVL 121
G + D ++++T+K L L
Sbjct: 918 EGGKLADVRKVTTLKADLLAAL 939
>gi|389693889|ref|ZP_10181983.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
gi|388587275|gb|EIM27568.1| (protein-PII) uridylyltransferase [Microvirga sp. WSM3557]
Length = 916
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
T IE +G DRPGL ++ L L+ N+ +A I T ++A V +VTD TG I
Sbjct: 832 QTVIEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVTD-LTGTKITHAG 890
Query: 109 RLSTIKELLFNVLRG 123
R +TI L V +
Sbjct: 891 RQATITRTLLEVFKA 905
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL D+T + +L+I A I T G K D FYVTD+TG +
Sbjct: 835 IEISGLDRPGLLYDLTTALGKLNLNIASAHIVTFGEKAVDVFYVTDLTGTKI 886
>gi|418296832|ref|ZP_12908675.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
gi|355539007|gb|EHH08249.1| PII uridylyl-transferase [Agrobacterium tumefaciens CCNWGS0286]
Length = 942
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 25 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 84
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 85 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 126
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
>gi|328545863|ref|YP_004305972.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
gi|326415603|gb|ADZ72666.1| UTP-GlnB uridylyltransferase, GlnD [Polymorphum gilvum SL003B-26A1]
Length = 942
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL D+TR +L+I A IST G +V D FYVTD+TG +
Sbjct: 857 IEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTDLTGQKI 908
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++ +T IE TG DRPGL ++ +A L+ N+ +A I T +R V +VTD TG I
Sbjct: 851 SDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVFYVTD-LTGQKIA 909
Query: 106 DPKRLSTIKELLFNVLRG 123
+ R I+E L + + G
Sbjct: 910 NVGRQDVIRERLRDAVEG 927
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 77/214 (35%), Gaps = 26/214 (12%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I D P L S + N+V+A+I T D A + +R
Sbjct: 744 TEITVLAPDHPRLLSSIAGACFVTGANIVDAQIDTTTDGFALDTIFISRELPDDADERRR 803
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
I +L+ LRG P + R+ A GR++
Sbjct: 804 GERITDLILKTLRGEAPL---------PDTVARK----------------AAAKGRMKAF 838
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
V V N D YTVI + DRP LL+D+ + + + ++T F
Sbjct: 839 RVASDVIVNNSWSDGYTVIEVTGLDRPGLLYDLTRAIATLNLNIGSAHISTFGERVVDVF 898
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIERRASEG 262
Y+ + G I++ ++ + + L A+E R G
Sbjct: 899 YVTDLTGQKIANVGRQDVIRERLRDAVEGRPEAG 932
>gi|209965870|ref|YP_002298785.1| PII uridylyl-transferase [Rhodospirillum centenum SW]
gi|209959336|gb|ACI99972.1| protein-P-II uridylyltransferase [Rhodospirillum centenum SW]
Length = 950
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 32/211 (15%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + D PGLFS + LA +V+A I+T ++ A V + G + + P +
Sbjct: 749 TDLTVYTADHPGLFSRLAGALALAGATIVDARIFTMSNGMALDVFSVHAAHGGSFESPDK 808
Query: 110 LS----TIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGR 165
L+ +++ L LR D+ K +++ P +R R V +
Sbjct: 809 LARLAVLVEKALAGELRMADELAKRRSATLP----SRAR------------------VFK 846
Query: 166 VEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 224
V P+V V N +TV+ + DRP LL+ + LT + + V T A
Sbjct: 847 VP-----PRVLVDNTASTAHTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMA 901
Query: 225 YQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
FY++ V GL ++ EA+ ++ Q L A+
Sbjct: 902 VDVFYVKDVFGLKVTHEAKLTQIRQALLDAL 932
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
HT +E G DRPGL V L L+ + +A++ T+ + A V +V D G +
Sbjct: 861 HTVVEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVKD-VFGLKVTHEA 919
Query: 109 RLSTIKELLFNVLRGYD-DFRKAKTSLSPP 137
+L+ I++ L + L D D R AK PP
Sbjct: 920 KLTQIRQALLDALADPDTDARTAK----PP 945
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ DR GLL +TR +L I A+++T G D FYV DV G
Sbjct: 864 VEVNGPDRPGLLYAVTRALTRLNLQIASAKVATYGNMAVDVFYVKDVFG 912
>gi|159184269|ref|NP_353378.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
gi|22256761|sp|Q8UIF1.1|GLND_AGRT5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|159139596|gb|AAK86163.2| uridylyltransferase/uridylyl-removing enzyme UTase [Agrobacterium
fabrum str. C58]
Length = 942
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 25 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 84
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 85 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 126
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASE 261
+ G ++++ + + Q L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|299132879|ref|ZP_07026074.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
gi|298593016|gb|EFI53216.1| UTP-GlnB uridylyltransferase, GlnD [Afipia sp. 1NLS2]
Length = 961
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
+T IE TG DRPGL ++ ++ L N+ +A + T +R V +VTD G I P
Sbjct: 880 YTVIEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTD-LMGAQITAPT 938
Query: 109 RLSTIKELLFNVLRGYDDFR 128
R + IK L ++L D R
Sbjct: 939 RQAAIKRALVHLLANPDTTR 958
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+E+ DR GLL +T + SL+I A ++T G +V+D FYVTD+ G + P +
Sbjct: 883 IEVTGLDRPGLLYQLTTAISKLSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAA 942
Query: 324 IRRQIGH 330
I+R + H
Sbjct: 943 IKRALVH 949
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 84/224 (37%), Gaps = 27/224 (12%)
Query: 29 TDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 88
DAS L VG T + D P L S V A N+V+A+I+T D
Sbjct: 750 ADAS-GKKLAIEVGFEEGRAVTELTLLAPDHPWLLSIVAGACAANGANIVDAQIYTTTDG 808
Query: 89 AAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQ 148
A + +R S I E++ VL G K L P +M R
Sbjct: 809 LALDTIAISREYDRNEDEARRASRIGEMIEQVLEG-------KVRL--PEVMAR------ 853
Query: 149 IMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTD 207
R R + V VE P+V + N D YTVI + DRP LL+ + ++
Sbjct: 854 -----RTQARAKTKVFVVE-----PEVVINNQWSDVYTVIEVTGLDRPGLLYQLTTAISK 903
Query: 208 MQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCL 251
+ + V T FY+ + G I++ + + + L
Sbjct: 904 LSLNIGSAHVATFGERVRDVFYVTDLMGAQITAPTRQAAIKRAL 947
>gi|222147341|ref|YP_002548298.1| PII uridylyl-transferase [Agrobacterium vitis S4]
gi|254798828|sp|B9JZI2.1|GLND_AGRVS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|221734331|gb|ACM35294.1| protein-P-II uridylyltransferase [Agrobacterium vitis S4]
Length = 941
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR+GLL+++T + + SL I A I+T G KV DTFYV D+ G +
Sbjct: 841 IEIECLDRIGLLAEVTAVLADLSLDIHSARITTFGEKVIDTFYVIDLVGQKI 892
>gi|335033078|ref|ZP_08526450.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
gi|333795754|gb|EGL67079.1| PII uridylyl-transferase [Agrobacterium sp. ATCC 31749]
Length = 942
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 25 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 84
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 85 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 126
++ +VTD G + + R ++I + L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASE 261
+ G ++++ + + Q L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|325291780|ref|YP_004277644.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|418407873|ref|ZP_12981190.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
gi|325059633|gb|ADY63324.1| protein PII uridylyltransferase [Agrobacterium sp. H13-3]
gi|358005859|gb|EHJ98184.1| PII uridylyl-transferase [Agrobacterium tumefaciens 5A]
Length = 942
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 25 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 84
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 85 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 126
++ +VTD G + + R ++I L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIATRLKAVMSEQED 915
>gi|390169710|ref|ZP_10221643.1| PII uridylyl-transferase [Sphingobium indicum B90A]
gi|389587714|gb|EIM65776.1| PII uridylyl-transferase [Sphingobium indicum B90A]
Length = 919
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 88/224 (39%), Gaps = 31/224 (13%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
P T + D PGLF + + N+++A I T D A + G A
Sbjct: 723 PQRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAF 782
Query: 105 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVG 164
P +L+ I++ + + L NR R + ++ + R R
Sbjct: 783 HSPDQLTRIRKAIEDSL------------------ANRHRMITKL--EARPLPRTRAEAF 822
Query: 165 RVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
R+E P V + N + +TVI + ++DRP LLF + L + V V T
Sbjct: 823 RIE-----PNVLIDNKASNRFTVIEVNARDRPALLFSLANALFQSKVTVHSAHVATYGER 877
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLE-AAIERRASEGLELE 266
A FY+ + ++ + E + +Q LE +E E ELE
Sbjct: 878 AVDTFYVTDL----LAGKIESKGRLQTLERRLLEAAGGEVAELE 917
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 68/172 (39%), Gaps = 33/172 (19%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPIS 239
++ T++T+ + D P L + I + + ++T R A F ++ G
Sbjct: 724 QRGATLVTVYAADHPGLFYRIAGAIHLAGGNIIDARIHTTRDGVAIDNFLVQDPLGGAFH 783
Query: 240 SE--------------AERERVIQCLEA-----------------AIERRASEGLE-LEL 267
S A R R+I LEA I+ +AS +E+
Sbjct: 784 SPDQLTRIRKAIEDSLANRHRMITKLEARPLPRTRAEAFRIEPNVLIDNKASNRFTVIEV 843
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
DR LL + ++ +++ A ++T G + DTFYVTD+ ++ K
Sbjct: 844 NARDRPALLFSLANALFQSKVTVHSAHVATYGERAVDTFYVTDLLAGKIESK 895
>gi|417858727|ref|ZP_12503784.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
gi|338824731|gb|EGP58698.1| PII uridylyl-transferase [Agrobacterium tumefaciens F2]
Length = 942
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Query: 25 QRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT 84
+R ++ + PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T
Sbjct: 817 RRKKSAFTIPPSVIISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITT 874
Query: 85 HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 126
++ +VTD G + + R ++I L V+ +D
Sbjct: 875 FGEKVIDTFYVTD-LFGQKVTNDNRQASIATRLKAVMSEQED 915
>gi|307943361|ref|ZP_07658705.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
gi|307772991|gb|EFO32208.1| protein-P-II uridylyltransferase [Roseibium sp. TrichSKD4]
Length = 945
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 4/71 (5%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ DR GLL D+TR +L+I A I+T G KV D FYVTD+TG KI +
Sbjct: 859 VEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDLTGQ----KIANIG 914
Query: 325 RRQIGHTKLQV 335
R++I +L+
Sbjct: 915 RQEIIRERLEA 925
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
++++T +E TG DRPGL ++ ++ L+ N+ +A I T ++ V +VTD TG I
Sbjct: 853 SDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTD-LTGQKIA 911
Query: 106 DPKRLSTIKELLFNVLRGYDDF 127
+ R I+E L + G D
Sbjct: 912 NIGRQEIIRERLEAAVGGNVDM 933
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%)
Query: 179 NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
+I DYTV+ + DRP LLFD+ ++ + + + T + FY+ + G I
Sbjct: 851 SISDDYTVVEITGLDRPGLLFDLTRAISTLNLNIGSAHITTFGEKVVDVFYVTDLTGQKI 910
Query: 239 SSEAERERVIQCLEAAI 255
++ +E + + LEAA+
Sbjct: 911 ANIGRQEIIRERLEAAV 927
>gi|408787213|ref|ZP_11198944.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
gi|408486844|gb|EKJ95167.1| PII uridylyl-transferase [Rhizobium lupini HPC(L)]
Length = 942
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+ PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T ++
Sbjct: 824 TIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVID 881
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 126
+VTD G + + R ++I + L V+ +D
Sbjct: 882 TFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASE 261
+ G ++++ + + Q L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|424909280|ref|ZP_18332657.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
gi|392845311|gb|EJA97833.1| (protein-PII) uridylyltransferase [Rhizobium leguminosarum bv.
viciae USDA 2370]
Length = 942
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL+D+T + + SL I A I+T G KV DTFYVTD+ G V
Sbjct: 842 IEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVTDLFGQKV 893
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+ PS+ S G+ + + T IE DRPGL +++ AV+ADL ++ +A I T ++
Sbjct: 824 TIPPSVTISNGL--SNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVID 881
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 126
+VTD G + + R ++I + L V+ +D
Sbjct: 882 TFYVTD-LFGQKVTNDNRQASIAQRLKAVMSEQED 915
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P VT+ N + +TVI + DRP LL D+ + D+ + + T + FY+
Sbjct: 827 PSVTISNGLSNKFTVIEVECLDRPGLLADMTAVIADLSLDIHSARITTFGEKVIDTFYVT 886
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASE 261
+ G ++++ + + Q L+A + + E
Sbjct: 887 DLFGQKVTNDNRQASIAQRLKAVMSEQEDE 916
>gi|114707346|ref|ZP_01440243.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
gi|114537227|gb|EAU40354.1| PII uridylyl-transferase [Fulvimarina pelagi HTCC2506]
Length = 964
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLL+DIT + SL I+ A IST G K+ D FYVTD+ G V
Sbjct: 878 DRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAFYVTDLIGAKV 923
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 29/214 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I+ D P L S++ A N+ +++I+T D A V + + +R
Sbjct: 760 TRIKVLAPDHPRLVSQLAGACAGAKANIADSQIFTLTDGRALDVMTISRAFENEEDEMRR 819
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
I E + +LRG IM+R ++ R R +
Sbjct: 820 ARRICENIEKLLRG-------------ETIMSR------LIGQSRGTRRADLF------- 853
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
+P++TV N + TVI + DR LL DI ++D+ + ++T + F
Sbjct: 854 EVKPKITVDNSLSNRVTVIEVEGLDRTGLLADITGAISDLSLDIRSAHISTYGEKIIDAF 913
Query: 229 YIRHVDGLPISSEAERERVIQCLEAAIERRASEG 262
Y+ + G ++SEA+ R+ + L++ +E ++EG
Sbjct: 914 YVTDLIGAKVTSEAKIARIERRLQSVLE--SAEG 945
>gi|221133317|ref|ZP_03559622.1| UTP-GlnB uridylyltransferase, GlnD [Glaciecola sp. HTCC2999]
Length = 876
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 48/77 (62%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+EL D GLL+ I +F + +L+++ A+ISTIG + +D F V+D + + P++ ++
Sbjct: 800 IELEALDTPGLLASIGHVFVDFNLTLRLAKISTIGERAEDVFIVSDEHNHALSPELQLAL 859
Query: 325 RRQIGHTKLQVKRSTIL 341
++QI T Q++ T L
Sbjct: 860 KKQISLTLDQLETETAL 876
>gi|430001964|emb|CCF17744.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl-removing enzyme) (UTase) [Rhizobium sp.]
Length = 946
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLL++IT + + SL I A I+T G KV DTFYVTD+ G +
Sbjct: 847 DRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFYVTDLLGTKI 892
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Query: 35 PSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVH 94
PS+ S G+ + + T +E DRPGL +E+ AVLADL ++ +A I T ++ +
Sbjct: 826 PSVILSNGL--SNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDTFY 883
Query: 95 VTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIM 140
VTD G I + R I L V+ +D ++ P GI+
Sbjct: 884 VTD-LLGTKITNENRQGNISARLKAVMAEQEDELRSGM---PSGII 925
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 82/214 (38%), Gaps = 28/214 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I D P L S + + N+ +A+I+T +D A + + + +R
Sbjct: 728 TEITVLAPDHPRLLSVIAGACSAAGANIADAQIFTTSDGRALDTILINREFPVDEDELRR 787
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRER-RLHQIMFDDRDYERVEKAVGRVED 168
+TI ++ +VL G P I R + + MFD
Sbjct: 788 AATIGRMIEDVLSGKKRL--------PEVIATRAKAKRRNKMFD---------------- 823
Query: 169 KSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
P V + N + +TV+ + DRP LL +I L D+ + + T +
Sbjct: 824 --IPPSVILSNGLSNKFTVVEVECLDRPGLLAEITAVLADLSLDIHSARITTFGEKVIDT 881
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
FY+ + G I++E + + L+A + + E
Sbjct: 882 FYVTDLLGTKITNENRQGNISARLKAVMAEQEDE 915
>gi|126666182|ref|ZP_01737162.1| PII uridylyl-transferase [Marinobacter sp. ELB17]
gi|126629504|gb|EBA00122.1| PII uridylyl-transferase [Marinobacter sp. ELB17]
Length = 881
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ T DR GLL+ I ++ E+ + + A+I+T+G +V+D F+VTD GN + DP +
Sbjct: 809 LEVITPDRPGLLARIGQVLLEHRVRLTTAKIATLGERVEDVFFVTDENGNALCDPAACQA 868
Query: 324 IR 325
++
Sbjct: 869 LQ 870
>gi|406895502|gb|EKD40049.1| hypothetical protein ACD_75C00195G0001, partial [uncultured
bacterium]
Length = 651
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 92/223 (41%), Gaps = 24/223 (10%)
Query: 38 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
RS V TE+ + DRPGL +++C V+A + VV A+I+T D VV V D
Sbjct: 451 RSLVLASETEDAWQLLIMTVDRPGLLAKICGVMALNNLTVVKAQIFTWAD--GTVVDVID 508
Query: 98 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 157
++ LS + +G+ + + L+ M RL++ + Y
Sbjct: 509 ------VRSMDGLSFAE-------KGWRSLNE-QLDLAIEHRMGLSHRLYRKL--SSGYG 552
Query: 158 RVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGM 216
R + VG V K V + N + Y+VI + + D P L+ I + D +
Sbjct: 553 RRSQMVGEVASK-----VVIDNKSSEMYSVIEVYAADLPGQLYHITQAMADFGLNIHKAY 607
Query: 217 VNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259
+ T + FY+ G + E R V Q L +I R +
Sbjct: 608 IATEVEQLIDVFYVLDSRGRKLVDEDFRHEVTQGLLHSIGRES 650
>gi|239908123|ref|YP_002954864.1| protein-PII uridylyltransferase [Desulfovibrio magneticus RS-1]
gi|239797989|dbj|BAH76978.1| putative protein-PII uridylyltransferase [Desulfovibrio magneticus
RS-1]
Length = 884
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 252 EAAIERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
E AI+ +AS+ +++ +DRVGLL DI R E L A++ T G+V+D FYV
Sbjct: 794 EVAIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFYVRG 853
Query: 311 VTGNPV-DPKIIDSIRRQIGH 330
G V DP+ + I+ + H
Sbjct: 854 PAGRRVEDPEQLAEIKAALLH 874
>gi|374620392|ref|ZP_09692926.1| (protein-PII) uridylyltransferase [gamma proteobacterium HIMB55]
gi|374303619|gb|EHQ57803.1| (protein-PII) uridylyltransferase [gamma proteobacterium HIMB55]
Length = 869
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 86/196 (43%), Gaps = 35/196 (17%)
Query: 168 DKSSRPQVTVL----NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE 223
D SS P V + ++ + T I + + D + + L + + + +G
Sbjct: 664 DGSSEPLVLIKQSSESLIANATQIFVHTHDTENVFSKVCSALELLDLSINDARIYSGTDG 723
Query: 224 AYQE-FYIRHVDGLPISSEAERERVIQ--CLEAAIERRASEGLE---------------- 264
A + F++ DG PI S E +I+ +EA S+G +
Sbjct: 724 ATLDTFFVLKADGSPIDSAPETLTLIERSIVEALSASSVSQGNQRMNRTLRSFLSPTEVT 783
Query: 265 -----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+EL + DR GLL+ + +I +N +SI+ A+I T+G +V+D F++T G
Sbjct: 784 FIEDQNRNLTIMELSSPDRPGLLARVGQIMADNQISIQGAKIQTLGERVEDVFFLTTDQG 843
Query: 314 NPV-DPKIIDSIRRQI 328
+ + D I + +R Q+
Sbjct: 844 DRLADDTICERLREQV 859
>gi|89053388|ref|YP_508839.1| PII uridylyl-transferase [Jannaschia sp. CCS1]
gi|88862937|gb|ABD53814.1| UTP-GlnB (protein PII) uridylyltransferase GlnD [Jannaschia sp.
CCS1]
Length = 914
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 87/217 (40%), Gaps = 39/217 (17%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTD-HSTGYAIKDP 107
T + F D PG+ + + L+ + NVV+A +T D A AV V D + Y
Sbjct: 725 TRVCFALADHPGILTRLAGALSLVGANVVDARTYTSKDGYATAVFWVQDREGSPYEKARL 784
Query: 108 KRLSTI--KELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKA 162
RL+T+ K L+ V+ ++ K I RER + I FD+ E
Sbjct: 785 PRLTTMIRKTLMGEVVASEAMEKRDK-------IKKRERPFNVPTTITFDNEGSE----- 832
Query: 163 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
YT+I + ++DRP LL+D+ L + + T
Sbjct: 833 --------------------IYTIIEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGV 872
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259
+ FY++ GL + SE R + + L AI R A
Sbjct: 873 QVVDTFYVKDTFGLKLHSEPRRAALERKLRDAIARVA 909
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ + ++ I A I+T G +V DTFYV D G
Sbjct: 837 IEVDTRDRPGLLYDLAKCLAAANVYISSATIATYGVQVVDTFYVKDTFG 885
>gi|16124269|ref|NP_418833.1| PII uridylyl-transferase [Caulobacter crescentus CB15]
gi|221232952|ref|YP_002515388.1| PII uridylyl-transferase [Caulobacter crescentus NA1000]
gi|22256766|sp|Q9AC53.1|GLND_CAUCR RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|254798830|sp|B8GWX0.1|GLND_CAUCN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|13421101|gb|AAK22001.1| [protein-pII] uridylyltransferase [Caulobacter crescentus CB15]
gi|220962124|gb|ACL93480.1| protein-PII uridylyltransferase [Caulobacter crescentus NA1000]
Length = 940
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 64/163 (39%), Gaps = 33/163 (20%)
Query: 187 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAER- 244
+ + +KDR L D+ ++ + V V T R +A FY++ V G P E R
Sbjct: 738 VVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFYVQDVTGAPFGCENPRA 797
Query: 245 -ERVIQCLEAAIE--------RRASEGLE----------------------LELCTEDRV 273
R+ LEAA + RR SE +E DR
Sbjct: 798 LRRLADALEAAGKGDALAVEPRRGSEQTRAAAFAIAPSVTIDNDASNDATVVEASGRDRP 857
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
GLL + + +++LSI+ A I G + D FYV G V
Sbjct: 858 GLLHALAKTLADSALSIQSAHIDGYGERAVDAFYVQTTEGGKV 900
>gi|119505664|ref|ZP_01627734.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2080]
gi|119458476|gb|EAW39581.1| PII uridylyl-transferase [marine gamma proteobacterium HTCC2080]
Length = 875
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
LE+ T DR GLL++I +F +++++ A+I T+G +V+D F+VT GN ++
Sbjct: 799 LEVATPDRPGLLANIGAVFVAQNVALQAAKIQTLGERVEDVFFVTTSDGNSIN 851
>gi|385330904|ref|YP_005884855.1| [protein-PII] uridylyltransferase [Marinobacter adhaerens HP15]
gi|311694054|gb|ADP96927.1| [protein-PII] uridylyltransferase [Marinobacter adhaerens HP15]
Length = 881
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ T DR GLL+ I ++ E+ + + A+I+T+G +V+D F+VTD G P+
Sbjct: 809 MEVITPDRPGLLARIGQVLLEHRVRLSNAKIATLGERVEDVFFVTDEHGEPI 860
>gi|88798256|ref|ZP_01113842.1| PII uridylyl-transferase [Reinekea blandensis MED297]
gi|88779032|gb|EAR10221.1| PII uridylyl-transferase [Reinekea sp. MED297]
Length = 893
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL+DI R FR L++ A IST+G V+D F++ D G P+
Sbjct: 819 VEVVASDRPGLLADIGRCFRRLELTLLNARISTLGEHVEDVFFLVDRQGLPL 870
>gi|397687902|ref|YP_006525221.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
gi|395809458|gb|AFN78863.1| PII uridylyl-transferase [Pseudomonas stutzeri DSM 10701]
Length = 900
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR GLL+ I ++F E LS++ A+I+T+G +V+D F+VT+ P+
Sbjct: 817 IEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFVTNADNQPL 868
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 91/234 (38%), Gaps = 42/234 (17%)
Query: 21 DYIQQRLETDASFAPS--LR---SSVGVMPTEEHTSIEFTG--------TDRPGLFSEVC 67
DY + TD ++ LR SS ++ +E T EF G D+ F+
Sbjct: 663 DYFMRHSSTDVAWHTQAILRHGDSSEPLVLIKETTQHEFEGGTQIFIYAADQHDFFAVTV 722
Query: 68 AVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI-KDPKRLSTIKELLFNVLRGYDD 126
A + L+ N+ +A I T + + ++ + G I DP+R+ I++ L LR +D
Sbjct: 723 AAMDQLNLNIHDARIITSSSQFTLDTYIVLDADGAPIGNDPERIQEIRQGLTEALRNPED 782
Query: 127 FRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYT 185
+ P R+L F PQVT+ N ++ T
Sbjct: 783 YLTIIKRHVP-------RQLKHFAFP--------------------PQVTIHNDTQRPQT 815
Query: 186 VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
+I + + DRP LL I + V + + T F++ + D P+S
Sbjct: 816 IIEVIAPDRPGLLARIGQLFLEFDLSVQNAKIATMGERVEDVFFVTNADNQPLS 869
>gi|68250319|ref|YP_249431.1| PII uridylyl-transferase [Haemophilus influenzae 86-028NP]
gi|81170617|sp|Q4QJM6.1|GLND_HAEI8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|68058518|gb|AAX88771.1| [protein-PII] uridylyltransferase [Haemophilus influenzae 86-028NP]
Length = 863
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
++ E ++EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 315 PVDPKIIDSIR----RQIG 329
+D + + +R R IG
Sbjct: 845 ALDSQQREILRNVLYRNIG 863
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTQMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|224284356|gb|ACN39913.1| unknown [Picea sitchensis]
Length = 306
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 22/184 (11%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E T DR G + L DL NVV A ++ + +T TG + DP+
Sbjct: 113 TVVEVTFGDRLGALLDTMEALRDLGLNVVKANVFLDSSGKHNTFSITRADTGRKVDDPEA 172
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
L I+ + N L Y A+ ++ GI+ + + D D R+
Sbjct: 173 LEQIRLTIINNLLKYHPESSAQLAMGEAFGIVPPKEK------PDVDIST------RIHI 220
Query: 169 KSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
P ++L+IE + DRP LL +IV TL+D+ V G +T A +F
Sbjct: 221 YDDGPNRSLLSIE---------TADRPGLLVEIVKTLSDISVAVESGEFDTEGLLAKAKF 271
Query: 229 YIRH 232
++ +
Sbjct: 272 HVSY 275
>gi|419839139|ref|ZP_14362557.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
gi|386909850|gb|EIJ74514.1| protein-P-II uridylyltransferase [Haemophilus haemolyticus HK386]
Length = 863
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|313672568|ref|YP_004050679.1| UTP-glnb uridylyltransferase, glnd [Calditerrivibrio nitroreducens
DSM 19672]
gi|312939324|gb|ADR18516.1| UTP-GlnB uridylyltransferase, GlnD [Calditerrivibrio nitroreducens
DSM 19672]
Length = 856
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ ED VGLL I +F + +S+++A+IST +V D+FY+TD GN + D ++ +
Sbjct: 788 VDIYAEDFVGLLYYILSVFEKLRISVQKAKISTDVNRVVDSFYITDEFGNKIEDKSMLQT 847
Query: 324 IRRQI 328
IR +I
Sbjct: 848 IREEI 852
>gi|317051031|ref|YP_004112147.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
gi|316946115|gb|ADU65591.1| protein-P-II uridylyltransferase [Desulfurispirillum indicum S5]
Length = 897
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ T D+ GLL D+TR+ L+I A I+T +V D FYV+D+ GN V + I+
Sbjct: 829 VEVFTRDKPGLLYDLTRLLYTLGLTIHSASITTNVEQVVDVFYVSDLKGNKVLSEERIEG 888
Query: 324 IRRQIG 329
I+ Q+G
Sbjct: 889 IKEQVG 894
>gi|300024976|ref|YP_003757587.1| UTP-GlnB uridylyltransferase [Hyphomicrobium denitrificans ATCC
51888]
gi|299526797|gb|ADJ25266.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
ATCC 51888]
Length = 932
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+E T IE +G DRPGL E+ + L+DL ++ +A + T ++A V +VTD TG +
Sbjct: 843 SERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTD-LTGKQVV 901
Query: 106 DPKRLSTIKELLFNVL 121
R TI++ L +L
Sbjct: 902 SEVRQRTIRDRLQTIL 917
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 252 EAAIERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
E I SE L +E+ DR GLL ++T + SL I A ++T G K D FYVTD
Sbjct: 835 EIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKAVDVFYVTD 894
Query: 311 VTGNPVDPKIIDSIRRQIGHTKLQ 334
+TG +++ +R++ +LQ
Sbjct: 895 LTGK----QVVSEVRQRTIRDRLQ 914
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 224
VE + P++ + N + + TVI + +DRP LL+++ L+D+ + V T +A
Sbjct: 827 VEAFAVEPEIVINNELSERLTVIEVSGRDRPGLLYELTSALSDLSLDIASAHVTTFGEKA 886
Query: 225 YQEFYIRHVDGLPISSEAERERVIQ 249
FY+ + G + SE R+R I+
Sbjct: 887 VDVFYVTDLTGKQVVSEV-RQRTIR 910
>gi|417844045|ref|ZP_12490108.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
gi|341947997|gb|EGT74636.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21127]
Length = 863
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|430761259|ref|YP_007217116.1| [Protein-PII] uridylyltransferase [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430010883|gb|AGA33635.1| [Protein-PII] uridylyltransferase [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 886
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 328
DR GLLS I +F E +++++ A IST G +V+D F + + G + P+ D++RRQ+
Sbjct: 825 DRPGLLSTIGCVFAEQNVNVRTARISTAGEQVEDIFLLFNTDGRELTPEQQDALRRQL 882
>gi|344339494|ref|ZP_08770423.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
gi|343800798|gb|EGV18743.1| UTP-GlnB uridylyltransferase, GlnD [Thiocapsa marina 5811]
Length = 886
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 77/182 (42%), Gaps = 33/182 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHG-MVNTGRTEAYQEFYIRHVDGLPISSEAE 243
T I + + DR L I L + + ++ T A + + DG PI
Sbjct: 701 TEIFIYTTDRANLFGRITALLDQVGLNIMDARILTTEGGMAVNTYQVLDQDGSPIHDTLR 760
Query: 244 RERVIQCLEAAIERRASEGLE------------------------------LELCTEDRV 273
E + CL A + A E ++ + L T DR
Sbjct: 761 MEEIRSCLVADLAEDAGEEIQVARSMPRRHRYFPTETRVTFSTDEPNRRTIMRLATLDRP 820
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI-IDSIRRQIGHTK 332
GLL+++ +F+E + ++ A+I+T+G +V D F++T+ P+ + + +RR+I H +
Sbjct: 821 GLLAEVGAVFQECGIRLQNAKIATVGAEVDDVFFITNDDETPITCETALSCLRREI-HDR 879
Query: 333 LQ 334
L+
Sbjct: 880 LE 881
>gi|125540993|gb|EAY87388.1| hypothetical protein OsI_08795 [Oryza sativa Indica Group]
Length = 223
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Query: 29 TDASFAPSLRSSVGV-------MPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAE 81
T AS S R S+G+ M E T++E TG R GL SEV AVLAD+ C VV
Sbjct: 84 TTASSPTSSRLSLGMWNGPTRPMALEGLTALELTGAGRTGLISEVFAVLADMDCGVVEGR 143
Query: 82 IWTHNDRAAAVVHVTDHST 100
W H ++ + + T
Sbjct: 144 AWMHRVHLGCLIFLRNEET 162
>gi|417839977|ref|ZP_12486136.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
gi|341951103|gb|EGT77683.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19107]
Length = 863
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|270159640|ref|ZP_06188296.1| protein-P-II uridylyltransferase [Legionella longbeachae D-4968]
gi|269987979|gb|EEZ94234.1| protein-P-II uridylyltransferase [Legionella longbeachae D-4968]
Length = 876
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 215 GMVNTGRTEAYQEF---YIRHVDGLPISSEAERERVIQCLEAAIERR-----ASEGLELE 266
NT R+ QE ++ H D +P+ ++ R + + A+ L
Sbjct: 747 AFFNTQRSIDIQEALSTHLAHSDQMPVVAKRRLSRALAHFNVKTQIHYYDEIANNQTRLF 806
Query: 267 LCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRR 326
L T DR GLL+ I R+F + + A+I T G + +DTFY+T+ + P+ + +R
Sbjct: 807 LVTGDRPGLLATIGRVFSTLKIHLHNAKIVTAGERAEDTFYITNQKNQSLTPEEKEMLRE 866
Query: 327 QI 328
++
Sbjct: 867 KL 868
>gi|87118629|ref|ZP_01074528.1| PII uridylyl-transferase [Marinomonas sp. MED121]
gi|86166263|gb|EAQ67529.1| PII uridylyl-transferase [Marinomonas sp. MED121]
Length = 893
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDS 323
L++ DR GLL+ I + F + + + +A+I+T+G +V+DTFY+T+ +G VDP I
Sbjct: 818 LDVIAPDRPGLLAMIGQFFMKQDVMLHKAKIATLGERVEDTFYITEKSGERIVDPNRIKQ 877
Query: 324 IRRQI 328
+ +Q+
Sbjct: 878 LCQQL 882
>gi|357476529|ref|XP_003608550.1| Uridylyl transferases-like protein [Medicago truncatula]
gi|355509605|gb|AES90747.1| Uridylyl transferases-like protein [Medicago truncatula]
Length = 109
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 273 VGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTK 332
+GLLS +T++ EN LSI R E G + YVT +G V+ I++ I+R+IG
Sbjct: 1 MGLLSKVTQVIHENGLSITRIEFGVEGEAAIGSLYVTGCSGQDVNENIVELIKREIGG-- 58
Query: 333 LQVKRSTILAPKPP 346
S +LA P
Sbjct: 59 -----SIVLAQSSP 67
>gi|409393661|ref|ZP_11244961.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409393804|ref|ZP_11245087.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121642|gb|EKM97708.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
gi|409121803|gb|EKM97865.1| PII uridylyl-transferase [Pseudomonas sp. Chol1]
Length = 900
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
+E+ DR GLL+ + ++F LS++ A+I+T+G +V+D F+VT+ P+ DP++
Sbjct: 817 IEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTNADNQPLSDPQL 873
>gi|342904961|ref|ZP_08726756.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21621]
gi|341952197|gb|EGT78733.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21621]
Length = 863
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G KV+D F + + G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKVEDFFILANQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + ++L+ N++NA+I T ++ + + G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKVEDFF-ILANQFGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|289165574|ref|YP_003455712.1| PII uridylyl-transferase [Legionella longbeachae NSW150]
gi|288858747|emb|CBJ12652.1| putative PII uridylyl-transferase [Legionella longbeachae NSW150]
Length = 859
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 215 GMVNTGRTEAYQEF---YIRHVDGLPISSEAERERVIQCLEAAIERR-----ASEGLELE 266
NT R+ QE ++ H D +P+ ++ R + + A+ L
Sbjct: 730 AFFNTQRSIDIQEALSTHLAHSDQMPVVAKRRLSRALAHFNVKTQIHYYDEIANNQTRLF 789
Query: 267 LCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRR 326
L T DR GLL+ I R+F + + A+I T G + +DTFY+T+ + P+ + +R
Sbjct: 790 LVTGDRPGLLATIGRVFSTLKIHLHNAKIVTAGERAEDTFYITNQKNQSLTPEEKEMLRE 849
Query: 327 QI 328
++
Sbjct: 850 KL 851
>gi|417844793|ref|ZP_12490832.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
gi|341956273|gb|EGT82703.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M21639]
Length = 863
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + ++L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|253700950|ref|YP_003022139.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
gi|251775800|gb|ACT18381.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter sp. M21]
Length = 894
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 83/200 (41%), Gaps = 24/200 (12%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
D PGLFS + V+A N++ A+I T+ + + G+ I + R + + L
Sbjct: 717 DVPGLFSMITGVVAANGMNILGAQIHTNTNEKVLDILQVGSPQGFVITEESRWTRFQNDL 776
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKSSRPQVT 176
VL G P I++ E+ + V RVE +
Sbjct: 777 RQVLEGKVKVSALVAKRHRPSILS---------------EKAKPTVPARVEIDN------ 815
Query: 177 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
+ DYTVI + + D+ LL+ I TLT + + ++T + FY++ + G
Sbjct: 816 --EVSSDYTVIDIYAHDKIGLLYAITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGA 873
Query: 237 PISSEAERERVIQCLEAAIE 256
+ + + E + + L AA++
Sbjct: 874 KVMNPVKLEEIRKELLAAVD 893
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ D++GLL IT L I ++IST +V D FYV D+ G V +P ++
Sbjct: 824 IDIYAHDKIGLLYAITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGAKVMNPVKLEE 883
Query: 324 IRRQI 328
IR+++
Sbjct: 884 IRKEL 888
>gi|308813530|ref|XP_003084071.1| unnamed protein product [Ostreococcus tauri]
gi|116055954|emb|CAL58487.1| unnamed protein product [Ostreococcus tauri]
Length = 481
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
+L++ T DR GLL D+ R ++ SL + AE+ TIG K KD Y+T G P+ P +
Sbjct: 406 KLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYITH-RGGPLSPAM 461
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 18 EVIDYIQQRLETDASFAPS----LRSSV--GVMPTEE--HTSIEFTGTDRPGLFSEVCAV 69
E ++IQ + T A S +RS+V G+ T E HT ++ TDRPGL +V
Sbjct: 365 ESAEFIQAKAPTRAGANDSPLGKVRSTVETGIKCTAEKYHTKLDIETTDRPGLLVDVVRT 424
Query: 70 LADLHCNVVNAEIWTHNDRAAAVVHVT 96
L DL VV+AE+ T ++A ++++T
Sbjct: 425 LKDLSLCVVSAEVDTIGNKAKDIIYIT 451
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 21/185 (11%)
Query: 61 GLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKE-LLFN 119
G + A L +L ++ E+ D + +V D TG + +RL I++ +L N
Sbjct: 299 GELVDTIAALKNLGLDINRGEVTMGGDEKTSRFYVLDRDTGEKVTKSERLEEIRQTVLTN 358
Query: 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
+L + + + + +P + L ++ VE +
Sbjct: 359 MLAFHPESAEFIQAKAPTRAGANDSPLGKVR------STVETGIK-------------CT 399
Query: 180 IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS 239
EK +T + + + DRP LL D+V TL D+ V V+T +A YI H G P+S
Sbjct: 400 AEKYHTKLDIETTDRPGLLVDVVRTLKDLSLCVVSAEVDTIGNKAKDIIYITHRGG-PLS 458
Query: 240 SEAER 244
E+
Sbjct: 459 PAMEQ 463
>gi|319896795|ref|YP_004134989.1| uridylyltransferase [Haemophilus influenzae F3031]
gi|317432298|emb|CBY80651.1| uridylyltransferase [Haemophilus influenzae F3031]
Length = 863
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|386265651|ref|YP_005829143.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
gi|309972887|gb|ADO96088.1| PII uridylyl-transferase [Haemophilus influenzae R2846]
Length = 863
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|145633652|ref|ZP_01789379.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229845252|ref|ZP_04465385.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
gi|144985529|gb|EDJ92345.1| PII uridylyl-transferase [Haemophilus influenzae 3655]
gi|229811847|gb|EEP47543.1| PII uridylyl-transferase [Haemophilus influenzae 6P18H1]
Length = 863
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|167643982|ref|YP_001681645.1| PII uridylyl-transferase [Caulobacter sp. K31]
gi|167346412|gb|ABZ69147.1| UTP-GlnB uridylyltransferase, GlnD [Caulobacter sp. K31]
Length = 941
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 33/163 (20%)
Query: 187 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAER- 244
I + +KDR L D+ ++ + V V T R +A F+++ V G + E R
Sbjct: 739 IVIAAKDRRGLFADLALAISSLGGNVVGARVFTSRQGQALDVFHVQDVTGAALGCENPRV 798
Query: 245 -ERVIQCLEAA-------IERR-----------------------ASEGLELELCTEDRV 273
R+ LEAA IE R ++E +E DR
Sbjct: 799 LRRLADALEAAGRGEPLVIEPRRGGEQSRTAAFSIAPTVVIDNEASNEATVVEASGRDRP 858
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
GLL + R +N LSI+ A I G + D FYV G V
Sbjct: 859 GLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQTSEGGKV 901
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 22/132 (16%)
Query: 1 MDVFNVIDCDGKKI--RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPT- 46
+DVF+V D G + + V+ + LE P S ++ + PT
Sbjct: 778 LDVFHVQDVTGAALGCENPRVLRRLADALEAAGRGEPLVIEPRRGGEQSRTAAFSIAPTV 837
Query: 47 -------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 99
E T +E +G DRPGL + LAD ++ +A I + +RA +V S
Sbjct: 838 VIDNEASNEATVVEASGRDRPGLLQALARTLADNGLSIQSAHIDGYGERAVDAFYVQT-S 896
Query: 100 TGYAIKDPKRLS 111
G + D K+++
Sbjct: 897 EGGKVADAKKVT 908
>gi|374854463|dbj|BAL57344.1| protein-P-II uridylyltransferase [uncultured gamma proteobacterium]
Length = 859
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
LEL DR GLL+ + +F L + A I+T+G + +D F++TD G P+
Sbjct: 790 LELIAADRPGLLARVGEVFERFRLRLHEARIATLGNRAEDIFFLTDCQGQPL 841
>gi|145629183|ref|ZP_01784982.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
gi|144978686|gb|EDJ88409.1| PII uridylyl-transferase [Haemophilus influenzae 22.1-21]
Length = 863
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|145639126|ref|ZP_01794733.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|145271688|gb|EDK11598.1| PII uridylyl-transferase [Haemophilus influenzae PittII]
gi|309750707|gb|ADO80691.1| PII uridylyl-transferase [Haemophilus influenzae R2866]
Length = 863
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|261751472|ref|ZP_05995181.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
gi|261741225|gb|EEY29151.1| uridylyltransferase [Brucella suis bv. 5 str. 513]
Length = 935
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 856 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 901
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 830 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 889
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 890 SFYVTD-LVGHKISNATRQGNIKRKLLALL 918
>gi|388258218|ref|ZP_10135396.1| PII uridylyl-transferase [Cellvibrio sp. BR]
gi|387938339|gb|EIK44892.1| PII uridylyl-transferase [Cellvibrio sp. BR]
Length = 928
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ + DR GLL+ I RIF + + + A+I+T+G +V+D F++ D G P+ D + +
Sbjct: 853 LEVISPDRPGLLACIGRIFMDYDIQLLNAKIATLGERVEDIFFIADNDGKPLGDVALCEK 912
Query: 324 IRRQI 328
++++I
Sbjct: 913 LQQEI 917
>gi|304396642|ref|ZP_07378523.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
gi|304356151|gb|EFM20517.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. aB]
Length = 884
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P+S + +IQ LE AI RR S L
Sbjct: 750 EPDGSPLSPD-RHPMIIQALEQAITQSDWVPPRTRRPSAKLRHFSVDTEVNFLPTHTDRR 808
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRK 868
Query: 323 SIRRQI 328
++++++
Sbjct: 869 ALQQRL 874
>gi|149185003|ref|ZP_01863320.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
gi|148831114|gb|EDL49548.1| PII uridylyl-transferase [Erythrobacter sp. SD-21]
Length = 919
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 39/186 (20%)
Query: 170 SSRPQVTVLNIEKDY------TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT- 222
S+R + L++ +Y T++T+ + D P L + I + + ++T RT
Sbjct: 706 SAREKGHELSVHCEYYEARGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTSRTG 765
Query: 223 EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA---------------SEGLE--- 264
A F ++ G P E + ER+ + + A+ R S+ +
Sbjct: 766 WALDNFLVQDPHGAPFREEQQLERLKKSIADALANRIDLTPKLAQRPLPHSRSKAFDVSP 825
Query: 265 --------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
+E+ DR LL+ + R+ E+ L + A I+ G + DTFYVTD
Sbjct: 826 RVLFDNKASNRFTVIEVNARDRPALLNRLARVLFESRLVVHSAHITHYGERAVDTFYVTD 885
Query: 311 VTGNPV 316
+TG +
Sbjct: 886 LTGGKL 891
>gi|261756034|ref|ZP_05999743.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
gi|261745787|gb|EEY33713.1| uridylyltransferase [Brucella suis bv. 3 str. 686]
Length = 675
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 596 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 641
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 588 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 646
Query: 110 LSTIKELLFNVL 121
IK L +L
Sbjct: 647 QGNIKRKLLALL 658
>gi|381405610|ref|ZP_09930294.1| PII uridylyl-transferase [Pantoea sp. Sc1]
gi|380738809|gb|EIB99872.1| PII uridylyl-transferase [Pantoea sp. Sc1]
Length = 884
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P+S + +IQ LE AI RR S L
Sbjct: 750 EPDGSPLSPD-RHPMIIQALEQAITQSQWVPPRTRRPSAKLRHFSVDTEVNFLPTHTDRR 808
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRK 868
Query: 323 SIRRQI 328
++++++
Sbjct: 869 ALQQRL 874
>gi|306844413|ref|ZP_07477003.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
gi|306275226|gb|EFM56976.1| protein-P-II uridylyltransferase [Brucella inopinata BO1]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 110 LSTIKELLFNVL 121
IK L +L
Sbjct: 906 QGNIKRKLLALL 917
>gi|262375426|ref|ZP_06068659.1| protein-P-II uridylyltransferase [Acinetobacter lwoffii SH145]
gi|262309680|gb|EEY90810.1| protein-P-II uridylyltransferase [Acinetobacter lwoffii SH145]
Length = 890
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 318
+E+ T D GLL+ I +F L I A+I+T+G + +D F+VT GNP+ P
Sbjct: 810 VEIATLDHPGLLAKIGGLFMMQGLDIHSAKIATLGERAEDIFFVTKKDGNPMTP 863
>gi|23501056|ref|NP_697183.1| PII uridylyl-transferase [Brucella suis 1330]
gi|376279844|ref|YP_005153850.1| PII uridylyl-transferase [Brucella suis VBI22]
gi|384223838|ref|YP_005615002.1| PII uridylyl-transferase [Brucella suis 1330]
gi|30173076|sp|Q8G312.1|GLND_BRUSU RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|23346922|gb|AAN29098.1| [protein-pII] uridylyltransferase, putative [Brucella suis 1330]
gi|343382018|gb|AEM17510.1| PII uridylyl-transferase [Brucella suis 1330]
gi|358257443|gb|AEU05178.1| PII uridylyl-transferase [Brucella suis VBI22]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|260567217|ref|ZP_05837687.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
gi|260156735|gb|EEW91815.1| uridylyltransferase [Brucella suis bv. 4 str. 40]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|261324258|ref|ZP_05963455.1| uridylyltransferase [Brucella neotomae 5K33]
gi|261300238|gb|EEY03735.1| uridylyltransferase [Brucella neotomae 5K33]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|256368608|ref|YP_003106114.1| PII uridylyl-transferase [Brucella microti CCM 4915]
gi|255998766|gb|ACU47165.1| protein-P-II uridylyl-transferase [Brucella microti CCM 4915]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|161618133|ref|YP_001592020.1| PII uridylyl-transferase [Brucella canis ATCC 23365]
gi|376275082|ref|YP_005115521.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
gi|161334944|gb|ABX61249.1| protein-P-II uridylyltransferase [Brucella canis ATCC 23365]
gi|363403649|gb|AEW13944.1| protein-P-II uridylyltransferase [Brucella canis HSK A52141]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|381159779|ref|ZP_09869011.1| (protein-PII) uridylyltransferase [Thiorhodovibrio sp. 970]
gi|380877843|gb|EIC19935.1| (protein-PII) uridylyltransferase [Thiorhodovibrio sp. 970]
Length = 890
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+ L T DR GLL+++ +F + ++ A+I+T+G +V D F++T + P+ + + +
Sbjct: 815 MRLVTLDRPGLLAEVGSVFASCDIRLQSAKIATVGAEVDDVFFITTLADEPIRCETVLAC 874
Query: 325 RRQIGHTKLQ 334
RQ H +L+
Sbjct: 875 LRQEIHRRLE 884
>gi|225851679|ref|YP_002731912.1| PII uridylyl-transferase [Brucella melitensis ATCC 23457]
gi|256264811|ref|ZP_05467343.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|384210514|ref|YP_005599596.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|384407618|ref|YP_005596239.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|384444233|ref|YP_005602952.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
gi|254798829|sp|C0RGK0.1|GLND_BRUMB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|225640044|gb|ACN99957.1| protein-P-II uridylyltransferase [Brucella melitensis ATCC 23457]
gi|263095221|gb|EEZ18890.1| uridylyltransferase [Brucella melitensis bv. 2 str. 63/9]
gi|326408165|gb|ADZ65230.1| PII uridylyl-transferase [Brucella melitensis M28]
gi|326537877|gb|ADZ86092.1| protein-P-II uridylyltransferase [Brucella melitensis M5-90]
gi|349742229|gb|AEQ07772.1| protein-P-II uridylyltransferase [Brucella melitensis NI]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|306842568|ref|ZP_07475219.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
gi|306287424|gb|EFM58904.1| protein-P-II uridylyltransferase [Brucella sp. BO2]
Length = 858
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 779 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 824
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 753 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 812
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 813 SFYVTD-LVGHKISNATRQGNIKRKLLALL 841
>gi|261218146|ref|ZP_05932427.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261321007|ref|ZP_05960204.1| uridylyltransferase [Brucella ceti M644/93/1]
gi|260923235|gb|EEX89803.1| uridylyltransferase [Brucella ceti M13/05/1]
gi|261293697|gb|EEX97193.1| uridylyltransferase [Brucella ceti M644/93/1]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|303290516|ref|XP_003064545.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454143|gb|EEH51450.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 271
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 31 ASFAPSLRSSVGVMPTE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR 88
A AP++++SV V T + + T TDRPGL ++ A L DL NV++AEI T +
Sbjct: 169 ARVAPAVKTSVVVDNTSGARQSKLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPK 228
Query: 89 AAAVVHVT 96
A +V+VT
Sbjct: 229 AYDIVYVT 236
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 74/190 (38%), Gaps = 35/190 (18%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
D G + A L L N+V AE+ + ++TD T I K L I+ +
Sbjct: 74 DVLGQLLDTAASLKSLGLNIVRAEVSDTTESGVNKFYITDARTSEKITKSKTLELIRMTI 133
Query: 118 FNVLRGYD----DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE------RVEKAV--GR 165
N + Y D+ + PG DRD + RV AV
Sbjct: 134 INNMLQYHPEAADYLVEGQHIEMPG--------------DRDADANPLGARVAPAVKTSV 179
Query: 166 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
V D +S + + L +IT + DRP LL DIV TL D+ V ++T +AY
Sbjct: 180 VVDNTSGARQSKL-------IIT--TTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAY 230
Query: 226 QEFYIRHVDG 235
Y+ + G
Sbjct: 231 DIVYVTYQGG 240
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
+L + T DR GLL DI ++ SL++ AEI TIG K D YVT
Sbjct: 191 KLIITTTDRPGLLVDIVATLKDLSLNVISAEIDTIGPKAYDIVYVT 236
>gi|308185738|ref|YP_003929869.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
gi|308056248|gb|ADO08420.1| protein PII uridylyltransferase [Pantoea vagans C9-1]
Length = 884
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P+S + +IQ LE AI RR S L
Sbjct: 750 EPDGSPLSPD-RHPMIIQALEQAITQSDWVPPRTRRPSAKLRHFSVDTEVNFLPTHTDRR 808
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERQALDEEMRK 868
Query: 323 SIRRQI 328
++++++
Sbjct: 869 ALQQRL 874
>gi|260885020|ref|ZP_05896634.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297247538|ref|ZP_06931256.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
gi|260874548|gb|EEX81617.1| uridylyltransferase [Brucella abortus bv. 9 str. C68]
gi|297174707|gb|EFH34054.1| protein-P-II uridylyltransferase [Brucella abortus bv. 5 str.
B3196]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|148560425|ref|YP_001258178.1| PII uridylyl-transferase [Brucella ovis ATCC 25840]
gi|166226141|sp|A5VN81.1|GLND_BRUO2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148371682|gb|ABQ61661.1| protein-P-II uridylyltransferase [Brucella ovis ATCC 25840]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|114321016|ref|YP_742699.1| UTP-GlnB uridylyltransferase, GlnD [Alkalilimnicola ehrlichii
MLHE-1]
gi|114227410|gb|ABI57209.1| UTP-GlnB uridylyltransferase, GlnD [Alkalilimnicola ehrlichii
MLHE-1]
Length = 894
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DP 318
LEL T DR GLL+ + + F + + +K A+I+TIG + +D F++TD P+ DP
Sbjct: 817 LELITGDRPGLLAQVGQAFSQCRVKLKNAKIATIGERAEDVFFITDDQDEPLADP 871
>gi|17988087|ref|NP_540721.1| PII uridylyl-transferase [Brucella melitensis bv. 1 str. 16M]
gi|62289122|ref|YP_220915.1| PII uridylyl-transferase [Brucella abortus bv. 1 str. 9-941]
gi|82699061|ref|YP_413635.1| PII uridylyl-transferase [Brucella melitensis biovar Abortus 2308]
gi|189023397|ref|YP_001934165.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225626684|ref|ZP_03784723.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237814613|ref|ZP_04593611.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260546419|ref|ZP_05822159.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260563217|ref|ZP_05833703.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260756000|ref|ZP_05868348.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260759224|ref|ZP_05871572.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260760946|ref|ZP_05873289.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|261215276|ref|ZP_05929557.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|261221372|ref|ZP_05935653.1| uridylyltransferase [Brucella ceti B1/94]
gi|261314640|ref|ZP_05953837.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261759259|ref|ZP_06002968.1| uridylyltransferase [Brucella sp. F5/99]
gi|265992346|ref|ZP_06104903.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994089|ref|ZP_06106646.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|265997332|ref|ZP_06109889.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|376271945|ref|YP_005150523.1| uridylyltransferase [Brucella abortus A13334]
gi|423167714|ref|ZP_17154417.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|423169910|ref|ZP_17156585.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|423175099|ref|ZP_17161768.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|423178050|ref|ZP_17164695.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|423179343|ref|ZP_17165984.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|423182473|ref|ZP_17169110.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|423186584|ref|ZP_17173198.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
gi|423190978|ref|ZP_17177586.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|22256763|sp|Q8YES3.1|GLND_BRUME RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|75497477|sp|Q57FN0.1|GLND_BRUAB RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|91206741|sp|Q2YNZ1.1|GLND_BRUA2 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238689407|sp|B2S8D8.1|GLND_BRUA1 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|17983838|gb|AAL52985.1| [protein-pii] uridylyltransferase [Brucella melitensis bv. 1 str.
16M]
gi|62195254|gb|AAX73554.1| [protein-pII] uridylyltransferase, hypothetical [Brucella abortus
bv. 1 str. 9-941]
gi|82615162|emb|CAJ10099.1| Amino acid-binding ACT:Metal dependent phosphohydrolase, HD
region:Metal-dependent phosphohydrolase, HD region
[Brucella melitensis biovar Abortus 2308]
gi|189018969|gb|ACD71691.1| PII uridylyl-transferase [Brucella abortus S19]
gi|225618341|gb|EEH15384.1| protein-P-II uridylyltransferase [Brucella ceti str. Cudo]
gi|237789450|gb|EEP63660.1| protein-P-II uridylyltransferase [Brucella abortus str. 2308 A]
gi|260096526|gb|EEW80402.1| uridylyltransferase [Brucella abortus NCTC 8038]
gi|260153233|gb|EEW88325.1| uridylyltransferase [Brucella melitensis bv. 1 str. 16M]
gi|260669542|gb|EEX56482.1| uridylyltransferase [Brucella abortus bv. 4 str. 292]
gi|260671378|gb|EEX58199.1| uridylyltransferase [Brucella abortus bv. 2 str. 86/8/59]
gi|260676108|gb|EEX62929.1| uridylyltransferase [Brucella abortus bv. 6 str. 870]
gi|260916883|gb|EEX83744.1| uridylyltransferase [Brucella abortus bv. 3 str. Tulya]
gi|260919956|gb|EEX86609.1| uridylyltransferase [Brucella ceti B1/94]
gi|261303666|gb|EEY07163.1| uridylyltransferase [Brucella pinnipedialis M163/99/10]
gi|261739243|gb|EEY27239.1| uridylyltransferase [Brucella sp. F5/99]
gi|262551800|gb|EEZ07790.1| uridylyltransferase [Brucella ceti M490/95/1]
gi|262765070|gb|EEZ10991.1| uridylyltransferase [Brucella melitensis bv. 3 str. Ether]
gi|263003412|gb|EEZ15705.1| uridylyltransferase [Brucella melitensis bv. 1 str. Rev.1]
gi|363399551|gb|AEW16521.1| uridylyltransferase [Brucella abortus A13334]
gi|374537330|gb|EHR08843.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI486]
gi|374541148|gb|EHR12647.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI435a]
gi|374542146|gb|EHR13635.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI474]
gi|374547534|gb|EHR18988.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI488]
gi|374550862|gb|EHR22297.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI010]
gi|374551319|gb|EHR22753.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI016]
gi|374553668|gb|EHR25082.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI259]
gi|374558263|gb|EHR29657.1| [protein-PII] uridylyltransferase [Brucella abortus bv. 1 str.
NI021]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|261316802|ref|ZP_05955999.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340789768|ref|YP_004755232.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
gi|261296025|gb|EEX99521.1| uridylyltransferase [Brucella pinnipedialis B2/94]
gi|340558226|gb|AEK53464.1| PII uridylyl-transferase [Brucella pinnipedialis B2/94]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|163842415|ref|YP_001626819.1| PII uridylyl-transferase [Brucella suis ATCC 23445]
gi|189041205|sp|B0CIQ3.1|GLND_BRUSI RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|163673138|gb|ABY37249.1| protein-P-II uridylyltransferase [Brucella suis ATCC 23445]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|145635426|ref|ZP_01791127.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
gi|145267300|gb|EDK07303.1| PII uridylyl-transferase [Haemophilus influenzae PittAA]
Length = 157
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 85 EHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 144
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 145 REILRNVLYRNIG 157
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 84 KEHTEMELVALDKPGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQF-GQALDS 142
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 143 QQR-----EILRNVL 152
>gi|265987872|ref|ZP_06100429.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
gi|264660069|gb|EEZ30330.1| uridylyltransferase [Brucella pinnipedialis M292/94/1]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|265983322|ref|ZP_06096057.1| uridylyltransferase [Brucella sp. 83/13]
gi|306839592|ref|ZP_07472396.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
gi|264661914|gb|EEZ32175.1| uridylyltransferase [Brucella sp. 83/13]
gi|306405290|gb|EFM61565.1| protein-P-II uridylyltransferase [Brucella sp. NF 2653]
Length = 934
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F R + + + T IE G DRPGL SE+ +++DL ++ +A I T ++
Sbjct: 829 AFKVEPRVEINNTLSNKFTVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 889 SFYVTD-LVGHKISNATRQGNIKRKLLALL 917
>gi|239830994|ref|ZP_04679323.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
gi|239823261|gb|EEQ94829.1| protein-P-II uridylyltransferase [Ochrobactrum intermedium LMG
3301]
Length = 969
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 890 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 935
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 882 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 940
Query: 110 LSTIKELLFNVL 121
I+ L VL
Sbjct: 941 QGNIRRKLLGVL 952
>gi|431930140|ref|YP_007243186.1| (protein-PII) uridylyltransferase [Thioflavicoccus mobilis 8321]
gi|431828443|gb|AGA89556.1| (protein-PII) uridylyltransferase [Thioflavicoccus mobilis 8321]
Length = 874
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 31/208 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T I DR GLF+ A+L L N+++A I T++D + G ++D R
Sbjct: 690 TEIFIYTRDRQGLFARTTAMLDQLGLNIMDARILTNDDGMTLNSYQVLDQGGTQVEDETR 749
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L+ I+ L +VL +D SL M R+ + Y +E V D+
Sbjct: 750 LAEIQGALVSVLAEHD------PSLEVARRMPRQYK----------YFPIETKVTFTTDE 793
Query: 170 SSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY 229
++R TV+ + + DRP LL + + + + T E F+
Sbjct: 794 TNR-----------RTVMRLTTLDRPGLLAAVGSVFETCGIRLSNAKIATIGAEVDDVFF 842
Query: 230 IRHVDGLPISSEAERERVIQCLEAAIER 257
I +G PI+ EA+ + CL+ I R
Sbjct: 843 ITSPEGRPITCEAD----LNCLQEEIHR 866
Score = 44.7 bits (104), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+ L T DR GLL+ + +F + + A+I+TIG +V D F++T G P+
Sbjct: 800 MRLTTLDRPGLLAAVGSVFETCGIRLSNAKIATIGAEVDDVFFITSPEGRPI 851
>gi|288941756|ref|YP_003443996.1| UTP-GlnB uridylyltransferase, GlnD [Allochromatium vinosum DSM 180]
gi|288897128|gb|ADC62964.1| UTP-GlnB uridylyltransferase, GlnD [Allochromatium vinosum DSM 180]
Length = 885
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+ L T DR GLL+++ +F + + ++ A+I+T+G +V D F++T P+ + +
Sbjct: 811 MRLTTLDRPGLLAEVGAVFEQCGIRLQNAKIATVGAEVDDVFFITTAEETPITCEQALSC 870
Query: 324 IRRQIGHTKLQVK 336
+RR+I H +L+ +
Sbjct: 871 LRREI-HDRLEAR 882
>gi|444309189|ref|ZP_21144829.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
gi|443487580|gb|ELT50342.1| PII uridylyl-transferase [Ochrobactrum intermedium M86]
Length = 934
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLLS++T + + SL I A I+T G KV D+FYVTD+ G+ +
Sbjct: 855 DRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTDLVGHKI 900
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE G DRPGL SE+ +++DL ++ +A I T ++ +VTD G+ I + R
Sbjct: 847 TVIEVEGLDRPGLLSELTGLISDLSLDIASAHITTFGEKVIDSFYVTD-LVGHKISNATR 905
Query: 110 LSTIKELLFNVL 121
I+ L VL
Sbjct: 906 QGNIRRKLLGVL 917
>gi|53805193|ref|YP_113084.1| protein-P-II uridylyltransferase [Methylococcus capsulatus str.
Bath]
gi|81170623|sp|Q60BB2.1|GLND_METCA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|53758954|gb|AAU93245.1| protein-P-II uridylyltransferase [Methylococcus capsulatus str.
Bath]
Length = 877
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
LEL DR GLLS + + F + + A+IST+G + +D F++TD P+D
Sbjct: 806 LELIATDRPGLLSKVGQAFMRTGIRLHNAKISTVGSRAEDIFFITDREDRPLD 858
>gi|52841948|ref|YP_095747.1| protein-PII uridylyltransferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777582|ref|YP_005186020.1| protein-PII uridylyltransferase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|81170620|sp|Q5ZUS2.1|GLND_LEGPH RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|52629059|gb|AAU27800.1| protein-PII uridylyltransferase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364508397|gb|AEW51921.1| protein-PII uridylyltransferase [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 861
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
I+ + +L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG
Sbjct: 779 IDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGY 838
Query: 315 PVD 317
++
Sbjct: 839 SLN 841
>gi|357417896|ref|YP_004930916.1| PII uridylyl-transferase [Pseudoxanthomonas spadix BD-a59]
gi|355335474|gb|AER56875.1| PII uridylyl-transferase [Pseudoxanthomonas spadix BD-a59]
Length = 875
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
LEL DR GLL+ + ++ R L + A I+T G + +D F+++D P+ + D++
Sbjct: 804 LELVAPDRPGLLAQVAQVLRGQRLRVHEARIATFGERAEDVFHLSDEADRPLSGQARDAL 863
Query: 325 R 325
R
Sbjct: 864 R 864
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 99
HT +E DRPGL ++V VL V A I T +RA V H++D +
Sbjct: 801 HTVLELVAPDRPGLLAQVAQVLRGQRLRVHEARIATFGERAEDVFHLSDEA 851
>gi|398830549|ref|ZP_10588735.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
gi|398213986|gb|EJN00570.1| (protein-PII) uridylyltransferase [Phyllobacterium sp. YR531]
Length = 937
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 32 SFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA 91
+F + R + + + T IE G DRPG+ SE+ V++DL ++ +A + T ++
Sbjct: 829 AFKITPRVEINNTLSNKFTVIEVEGLDRPGVLSEITGVISDLSLDIASAHVTTFGEKVID 888
Query: 92 VVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
V +VTD G+ I + R S I++ L +
Sbjct: 889 VFYVTD-LVGHQITNTTRQSRIRKKLLALF 917
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR G+LS+IT + + SL I A ++T G KV D FYVTD+ G+ +
Sbjct: 855 DRPGVLSEITGVISDLSLDIASAHVTTFGEKVIDVFYVTDLVGHQI 900
>gi|418055379|ref|ZP_12693434.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
gi|353210961|gb|EHB76362.1| UTP-GlnB uridylyltransferase, GlnD [Hyphomicrobium denitrificans
1NES1]
Length = 932
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ DR GLL ++T + + SL I A ++T G K D FYVTD+ G +I+ +
Sbjct: 849 IEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTDLVGK----QILSEV 904
Query: 325 RRQIGHTKLQVKRSTILAPKPPK 347
R++ +LQ AP P+
Sbjct: 905 RQRAIRDRLQSVMLDKDAPVAPE 927
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE +G DRPGL E+ +VL+DL ++ +A + T ++A V +VTD G I R
Sbjct: 847 TVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKAVDVFYVTD-LVGKQILSEVR 905
Query: 110 LSTIKELLFNVL 121
I++ L +V+
Sbjct: 906 QRAIRDRLQSVM 917
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 224
VE + P+V + N + TVI + +DRP LL+++ L+D+ + V T +A
Sbjct: 827 VEAFAVEPEVIINNDLSGRLTVIEVSGRDRPGLLYELTSVLSDLSLDIASAHVTTFGEKA 886
Query: 225 YQEFYIRHVDGLPISSEAERERVIQ 249
FY+ + G I SE R+R I+
Sbjct: 887 VDVFYVTDLVGKQILSEV-RQRAIR 910
>gi|148359259|ref|YP_001250466.1| protein-PII uridylyltransferase [Legionella pneumophila str. Corby]
gi|296107306|ref|YP_003619006.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy]
gi|166226152|sp|A5ICM0.1|GLND_LEGPC RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|148281032|gb|ABQ55120.1| protein-PII uridylyltransferase [Legionella pneumophila str. Corby]
gi|295649207|gb|ADG25054.1| Cytosine/adenosine deaminase [Legionella pneumophila 2300/99 Alcoy]
Length = 861
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
I+ + +L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG
Sbjct: 779 IDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGY 838
Query: 315 PVD 317
++
Sbjct: 839 SLN 841
>gi|307610416|emb|CBW99986.1| hypothetical protein LPW_17431 [Legionella pneumophila 130b]
Length = 861
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
I+ + +L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG
Sbjct: 779 IDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGY 838
Query: 315 PVD 317
++
Sbjct: 839 SLN 841
>gi|116748021|ref|YP_844708.1| UTP-GlnB uridylyltransferase GlnD [Syntrophobacter fumaroxidans
MPOB]
gi|116697085|gb|ABK16273.1| UTP-GlnB uridylyltransferase, GlnD [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ T DR G+L IT +SI+ A+IST G +V D FYVTD++GN + D ++ +
Sbjct: 792 IEVYTWDRPGVLHCITDTLYHLDVSIQLAKISTPGAQVADVFYVTDLSGNKLMDYEMHEK 851
Query: 324 IR 325
IR
Sbjct: 852 IR 853
>gi|54297634|ref|YP_124003.1| hypothetical protein lpp1685 [Legionella pneumophila str. Paris]
gi|81170619|sp|Q5X4J1.1|GLND_LEGPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|53751419|emb|CAH12837.1| hypothetical protein lpp1685 [Legionella pneumophila str. Paris]
Length = 861
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
I+ + +L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG
Sbjct: 779 IDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGY 838
Query: 315 PVD 317
++
Sbjct: 839 SLN 841
>gi|397667447|ref|YP_006508984.1| uridylyltransferase [Legionella pneumophila subsp. pneumophila]
gi|395130858|emb|CCD09107.1| uridylyltransferase [Legionella pneumophila subsp. pneumophila]
Length = 861
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
I+ + +L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG
Sbjct: 779 IDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGY 838
Query: 315 PVD 317
++
Sbjct: 839 SLN 841
>gi|54294608|ref|YP_127023.1| hypothetical protein lpl1684 [Legionella pneumophila str. Lens]
gi|81170621|sp|Q5WVX6.1|GLND_LEGPL RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|53754440|emb|CAH15924.1| hypothetical protein lpl1684 [Legionella pneumophila str. Lens]
Length = 861
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
I+ + +L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG
Sbjct: 779 IDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGY 838
Query: 315 PVD 317
++
Sbjct: 839 SLN 841
>gi|397664171|ref|YP_006505709.1| uridylyltransferase [Legionella pneumophila subsp. pneumophila]
gi|395127582|emb|CCD05781.1| uridylyltransferase [Legionella pneumophila subsp. pneumophila]
Length = 861
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
I+ + +L L T DR GLL+ I+R+F ++ + A+I+T G +V+D FY+++ TG
Sbjct: 779 IDDNTNHQTQLFLVTNDRPGLLATISRVFLTLNIHLHNAKIATAGERVEDMFYISNQTGY 838
Query: 315 PVD 317
++
Sbjct: 839 SLN 841
>gi|304393801|ref|ZP_07375726.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
gi|303294000|gb|EFL88375.1| protein-P-II uridylyltransferase [Ahrensia sp. R2A130]
Length = 967
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 11/77 (14%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+EL DR G+LS IT + SL I A I+T G K DTFYVTD+ G+ +
Sbjct: 875 IELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVTDLVGSKI-------- 926
Query: 325 RRQIGHTKLQVKRSTIL 341
+ +L + R+T+L
Sbjct: 927 ---LNEERLDIARATLL 940
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 89/220 (40%), Gaps = 37/220 (16%)
Query: 28 ETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND 87
ETDA+ P + + + E T I D P L S + V A N+ +AEI+T D
Sbjct: 741 ETDAASIP-VATHIATRNFEAITEITLVAPDHPRLLSTITGVCAASGANIEDAEIYTMKD 799
Query: 88 -RAAAVVHVTDHSTGYAIKDP----KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNR 142
RA + V G DP +R I + + VLRG
Sbjct: 800 GRALDSIFV-----GRLYDDPDDEKRRARNIADTIEKVLRG------------------- 835
Query: 143 ERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDI 201
E+RL ++ + K R + + P+VT+ N + +TVI + + DR +L I
Sbjct: 836 EKRLSEL------ESQAGKPARRQQAFTITPKVTIDNAASNKFTVIELEALDRSGVLSRI 889
Query: 202 VCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSE 241
TL D+ + + T + FY+ + G I +E
Sbjct: 890 TDTLADLSLDIASAHIATYGEKFVDTFYVTDLVGSKILNE 929
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Query: 8 DCDGKKIRDKEVIDYIQQ---------RLETDA--------SFAPSLRSSVGVMPTEEHT 50
D D +K R + + D I++ LE+ A +F + + ++ + + T
Sbjct: 814 DPDDEKRRARNIADTIEKVLRGEKRLSELESQAGKPARRQQAFTITPKVTIDNAASNKFT 873
Query: 51 SIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRL 110
IE DR G+ S + LADL ++ +A I T+ ++ +VTD G I + +RL
Sbjct: 874 VIELEALDRSGVLSRITDTLADLSLDIASAHIATYGEKFVDTFYVTD-LVGSKILNEERL 932
Query: 111 STIKELLFNVL 121
+ L VL
Sbjct: 933 DIARATLLEVL 943
>gi|121998250|ref|YP_001003037.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
gi|121589655|gb|ABM62235.1| metal dependent phosphohydrolase [Halorhodospira halophila SL1]
Length = 889
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+EL T DR GLL+ + + F + +K A+I+T+G + +D F++TD G P+
Sbjct: 814 VELITADRPGLLARVGKAFSGCGVRVKNAKIATMGERAEDVFFITDDQGQPL 865
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
P T +E DRPGL + V + V NA+I T +RA V +TD G +
Sbjct: 807 PDNHRTVVELITADRPGLLARVGKAFSGCGVRVKNAKIATMGERAEDVFFITD-DQGQPL 865
Query: 105 KDPKRLSTIKELLFNVL 121
+ P + ++E L+ +L
Sbjct: 866 RLPVQYRCVREALYELL 882
>gi|255074903|ref|XP_002501126.1| predicted protein [Micromonas sp. RCC299]
gi|226516389|gb|ACO62384.1| predicted protein [Micromonas sp. RCC299]
Length = 246
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSI 290
R VD P+ + R R + IE + L + T DR GLL DI R ++ SL++
Sbjct: 138 RDVDANPLGA---RPRGKVATKVTIEAMGAARSRLIVETADRPGLLVDIVRTLKDLSLNV 194
Query: 291 KRAEISTIGGKVKDTFYVT 309
AEI TIG K DT Y+T
Sbjct: 195 VSAEIDTIGPKASDTVYLT 213
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
DRPGL ++ L DL NVV+AEI T +A+ V++T G A+ ++ EL+
Sbjct: 175 DRPGLLVDIVRTLKDLSLNVVSAEIDTIGPKASDTVYLTYR--GAALN-----PSMNELV 227
Query: 118 FNVLRGY 124
N L Y
Sbjct: 228 VNALTYY 234
>gi|336176218|ref|YP_004581593.1| UTP-GlnB uridylyltransferase, GlnD [Frankia symbiont of Datisca
glomerata]
gi|334857198|gb|AEH07672.1| UTP-GlnB uridylyltransferase, GlnD [Frankia symbiont of Datisca
glomerata]
Length = 765
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 83/223 (37%), Gaps = 43/223 (19%)
Query: 40 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA---AAVVHVT 96
+V +P + I DRPGL + VLA +V A N RA AAV +
Sbjct: 578 AVNPLPDDSMFEIVVVAPDRPGLLAATTGVLAVNRLDVHRASARGENGRALLQAAVA--S 635
Query: 97 DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH----QIMFD 152
H G + ++ L VL G D A+ + RRL +I+FD
Sbjct: 636 THDGGPSA------GKLRGDLLRVLAGRVDL-DARIAGREQAYAAARRRLPPAPPKIIFD 688
Query: 153 DRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVV 212
D + TV+ +R+ DR +LF +V LTD V
Sbjct: 689 DSGSD---------------------------TVVEIRTPDRAGVLFRMVRALTDAGLGV 721
Query: 213 FHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI 255
+V T + FY+R DG + RE V + AA+
Sbjct: 722 RTAIVATIGLDVVNAFYVREADGSTVGRPGRREEVANRVLAAL 764
>gi|87198706|ref|YP_495963.1| PII uridylyl-transferase [Novosphingobium aromaticivorans DSM
12444]
gi|123490505|sp|Q2GAJ4.1|GLND_NOVAD RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|87134387|gb|ABD25129.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Novosphingobium
aromaticivorans DSM 12444]
Length = 912
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 33/166 (19%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAE 243
T++T+ + D P L + I + + ++T R A F ++ G P++ ++
Sbjct: 722 TLVTVLAADHPGLFYRIAGGIHLAGGNIIDARIHTARNGTAVDNFLVQDPLGRPLNEASQ 781
Query: 244 RERVIQCLEAAIERR-------ASEGLE-------------------------LELCTED 271
ER+ + A+ R A+ L +E+ D
Sbjct: 782 IERLKNAIADALANRVKLVPQLAARPLARPRADAFDVRPIVIFDNKASNRFTVIEVGARD 841
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
R LL+ + R E L + A I+T G + DTFYVTDV G VD
Sbjct: 842 RPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVTDVLGEKVD 887
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 102/265 (38%), Gaps = 32/265 (12%)
Query: 5 NVIDCDGKKIRDKEVI----DYIQQRLE-TDASFAPSLRSSVGVMPTEEHTSIEFTGTDR 59
N+I G+++ D I D I L+ D + L P T + D
Sbjct: 672 NLIGTVGRQLGDAYWIAEPEDIIALNLQQMDQALGELLSVEAHWYPARGATLVTVLAADH 731
Query: 60 PGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119
PGLF + + N+++A I T + A + G + + ++ +K + +
Sbjct: 732 PGLFYRIAGGIHLAGGNIIDARIHTARNGTAVDNFLVQDPLGRPLNEASQIERLKNAIAD 791
Query: 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN 179
L NR + + Q+ R R R + RP V N
Sbjct: 792 AL------------------ANRVKLVPQLA--ARPLAR-----PRADAFDVRPIVIFDN 826
Query: 180 IEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPI 238
+ +TVI + ++DRP LL + L + + +V + T A FY+ V G +
Sbjct: 827 KASNRFTVIEVGARDRPALLNRLARALFEARLIVHSAHIATYGERAVDTFYVTDVLGEKV 886
Query: 239 SSEAERERV-IQCLEAAIERRASEG 262
SEA + V + LEAA +R+ +
Sbjct: 887 DSEARMKAVEKRLLEAAEDRKVKDA 911
>gi|329847428|ref|ZP_08262456.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
gi|328842491|gb|EGF92060.1| protein-P-II uridylyltransferase [Asticcacaulis biprosthecum C19]
Length = 948
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 30/184 (16%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--YAIKDP 107
T+ + DRPGLF+++ A++ NVV A+++T + A V S G + D
Sbjct: 747 TAFSISADDRPGLFADLSRAFANMGGNVVGAQVFTSSSGHALDVFYVQDSQGLPFGHDDA 806
Query: 108 KRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVE 167
+R+ ++ L G+ PP + R GR
Sbjct: 807 QRMKQAEQQLEQAALGH----------LPPPVAYR-----------------SALAGRTA 839
Query: 168 DKSSRPQVTVLNIEK-DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
+ P V + K + T+I + +DRP LL D+V + ++ + ++ A
Sbjct: 840 AFAIAPTVAFDDASKANATIIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVD 899
Query: 227 EFYI 230
FY+
Sbjct: 900 AFYV 903
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 21/119 (17%)
Query: 1 MDVFNVIDCDGKKIR--DKEVIDYIQQRLETDA-----------SFAPSLRSSVGVMPT- 46
+DVF V D G D + + +Q+LE A S ++ + PT
Sbjct: 788 LDVFYVQDSQGLPFGHDDAQRMKQAEQQLEQAALGHLPPPVAYRSALAGRTAAFAIAPTV 847
Query: 47 -------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH 98
T IE +G DRPGL +++ V+A L ++ +A I + +RA +VTDH
Sbjct: 848 AFDDASKANATIIEVSGRDRPGLLADLVDVMARLRMDIASAHIDCYGERAVDAFYVTDH 906
>gi|50119969|ref|YP_049136.1| PII uridylyl-transferase [Pectobacterium atrosepticum SCRI1043]
gi|81170615|sp|Q6D8E5.1|GLND_ERWCT RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|49610495|emb|CAG73940.1| [protein-PII] uridylyltransferase [Pectobacterium atrosepticum
SCRI1043]
Length = 904
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 32/186 (17%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E +++P V + + + T I + S DRP L + L V + T R
Sbjct: 699 LEHDTNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 758
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 264
A F + DG P++ + E + LE A+ RR S L
Sbjct: 759 AMDTFIVLEPDGSPLAQD-RHEMIRHALEQALTQRHYQHPRVRRTSPKLRHFSVPTEVNF 817
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
+EL D+ GLL+ I IF + +LS+ A ISTIG +V+D F + D
Sbjct: 818 LPTHTDRRSYMELSALDQPGLLARIGEIFSDLNLSLHGARISTIGERVEDLFILADSDRR 877
Query: 315 PVDPKI 320
+ P++
Sbjct: 878 ALKPEL 883
>gi|357510825|ref|XP_003625701.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
gi|355500716|gb|AES81919.1| hypothetical protein MTR_7g102330 [Medicago truncatula]
Length = 405
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 230
E + T+IT+ D+ L D+ + + V+T Y F++
Sbjct: 17 EGETTIITVNCPDKTGLGSDLCRIILLFHLTILRADVSTDGKWCYIVFWVVGKEKTRWSL 76
Query: 231 ---RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 287
R + P S A C + ++ + L+ C +DR GLL D+T + E
Sbjct: 77 LKKRLIAACPTCSSASGFSYF-CSDLQ-NQKPPDVFLLKFCCKDRKGLLHDVTEVLCELE 134
Query: 288 LSIKRAEISTI-GGKVKDTFYVTD 310
L+IK+ ++ST GKV D F++TD
Sbjct: 135 LTIKKVKVSTTPDGKVLDLFFITD 158
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 108/269 (40%), Gaps = 40/269 (14%)
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAAAVVHVTD-----HSTGYAIK 105
++F DR GL +V VL +L + ++ T D + + +TD H+
Sbjct: 112 LKFCCKDRKGLLHDVTEVLCELELTIKKVKVSTTPDGKVLDLFFITDTRELLHTEKRKDD 171
Query: 106 DPKRLSTIKELLFNV----LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 161
++L+T+ E F L G + ++ S S P + +FD +
Sbjct: 172 TIEKLTTVLEDFFTTIDIELVGPETTAFSQPSSSLPNAITD-------VFDLQSGTSTSD 224
Query: 162 AVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG- 220
+V V D + P +T++ + +D LL+DI+ TL D + +G +
Sbjct: 225 SVSIVMDNTLSPA---------HTLVQIMCQDHKGLLYDIMRTLKDFNIQISYGRFSKKP 275
Query: 221 RTEAYQEFYIRHVDGLPISSEAERE--------RVIQCLEAAIERRASEGLEL-----EL 267
R + + +I VDG I +++E +++ L A+ R + L EL
Sbjct: 276 RGKCEIDLFIMQVDGKKIVDPSKKESLSSRLKTELLRPLRVAVVSRGPDTQLLVANPVEL 335
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEIS 296
+ R + DIT + L I AE+
Sbjct: 336 SGKGRPLVFYDITLALKMLGLCIFSAEVG 364
>gi|224056635|ref|XP_002298947.1| predicted protein [Populus trichocarpa]
gi|222846205|gb|EEE83752.1| predicted protein [Populus trichocarpa]
Length = 413
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 230
E D TVIT+ D+ L D+ + + G V+T Y F++
Sbjct: 18 EGDPTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYLVFWVVGKSTTRWGL 77
Query: 231 ---RHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENS 287
R V+ P S A + R + L+L +DR GLL D+T + E
Sbjct: 78 LKKRLVEACPSCSSASGLSFYR--SELQPPRPPDVFLLKLSCQDRRGLLHDVTSVLCELE 135
Query: 288 LSIKRAEISTI-GGKVKDTFYVTD 310
L+IK+ ++ST G+V D F++TD
Sbjct: 136 LTIKKVKVSTTPDGRVIDLFFITD 159
>gi|148264430|ref|YP_001231136.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
gi|146397930|gb|ABQ26563.1| metal dependent phosphohydrolase [Geobacter uraniireducens Rf4]
Length = 898
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 23/197 (11%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
D PGLFS + V+A N++ A+I T + A V + G+ I D R ++
Sbjct: 719 DVPGLFSMITGVMAANGMNILGAQILTSRNGKALDVLQVNSPQGFVITDESRWQRLE--- 775
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 177
DD R+ G + ++R I+ + K RVE +
Sbjct: 776 -------DDMRQVLQGKVRVGTLVKKRYRPTILTEKPK----PKFPTRVEIDN------- 817
Query: 178 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 237
+ DYTVI + + D+ LL+ I TLT++ + V+T + FY++ + G
Sbjct: 818 -EVSADYTVIDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYVKDIFGHK 876
Query: 238 ISSEAERERV-IQCLEA 253
+ + E + I L+A
Sbjct: 877 LLGGDKLEEIRIHLLKA 893
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+++ T D+VGLL IT E L I +++ST +V D FYV D+ G+ +
Sbjct: 826 IDIYTHDKVGLLYRITSTLTELGLYIGVSKVSTKVDQVADVFYVKDIFGHKL 877
>gi|410465082|ref|ZP_11318452.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio
magneticus str. Maddingley MBC34]
gi|409981801|gb|EKO38320.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio
magneticus str. Maddingley MBC34]
Length = 884
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 252 EAAIERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
E I+ +AS+ +++ +DRVGLL DI R E L A++ T G+V+D FYV
Sbjct: 794 EVTIDNKASDLFTVIDVSCDDRVGLLYDIARTLAEMGLETHLAKVMTPAGRVRDVFYVRG 853
Query: 311 VTGNPV-DPKIIDSIRRQIGH 330
G V DP+ + I+ + H
Sbjct: 854 TAGRRVEDPEQLAEIKAALLH 874
>gi|357410930|ref|YP_004922666.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces flavogriseus ATCC
33331]
gi|320008299|gb|ADW03149.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces flavogriseus ATCC
33331]
Length = 810
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ +D GLL I ++++ ++ A +ST+G D FYVTD G P+ P+ +
Sbjct: 742 IEVRAQDAPGLLHRIGHALEQSAVRVRSAHVSTLGANAVDAFYVTDPDGEPLAPEQAAQV 801
Query: 325 RRQI 328
R++
Sbjct: 802 AREV 805
>gi|421082948|ref|ZP_15543827.1| Protein-P-II uridylyltransferase [Pectobacterium wasabiae CFBP
3304]
gi|401702174|gb|EJS92418.1| Protein-P-II uridylyltransferase [Pectobacterium wasabiae CFBP
3304]
Length = 903
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 32/186 (17%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E +++P V + + + T I + S DRP L + L V + T R
Sbjct: 698 LEHDTNKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 757
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 264
A F + DG P++ + E + Q LE ++ RR S L
Sbjct: 758 AMDTFIVLEPDGSPLAQD-RHEMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNF 816
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
+EL D+ GLL+ I IF + +LS+ A ISTIG +V+D F + D
Sbjct: 817 LPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRR 876
Query: 315 PVDPKI 320
+ P +
Sbjct: 877 ALKPDL 882
>gi|222055851|ref|YP_002538213.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
gi|221565140|gb|ACM21112.1| UTP-GlnB uridylyltransferase, GlnD [Geobacter daltonii FRC-32]
Length = 897
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 32/204 (15%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
D PGLFS + V+A N++ A I T+ N + V+ V + G+ I D R +++
Sbjct: 719 DTPGLFSMITGVMAANGMNILGAHILTNLNGKVLDVLQV-NSPQGFVITDEARWQRVEDD 777
Query: 117 LFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRP-QV 175
+ VL G KT ++ + ++R H+ F EKA K P +V
Sbjct: 778 MRQVLEG-------KTKIAA---LVKKR--HRAAF------LAEKA------KPKFPTRV 813
Query: 176 TVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVD 234
+ N + DYTVI + + D+ LL+ I L+++ + V+T + FY++ +
Sbjct: 814 EIDNEVSADYTVIDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYVKDIF 873
Query: 235 GLPI----SSEAERERVIQCLEAA 254
G I E R R++Q ++ A
Sbjct: 874 GQKILDQDKLEEIRGRLLQSIDEA 897
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ T D+VGLL IT E L I +++ST +V D FYV D+ G + D ++
Sbjct: 826 IDIYTHDKVGLLYRITSALSELGLYIGVSKVSTKVDQVADVFYVKDIFGQKILDQDKLEE 885
Query: 324 IRRQI 328
IR ++
Sbjct: 886 IRGRL 890
>gi|149374439|ref|ZP_01892213.1| protein-P-II uridylyltransferase [Marinobacter algicola DG893]
gi|149361142|gb|EDM49592.1| protein-P-II uridylyltransferase [Marinobacter algicola DG893]
Length = 881
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ T DR GLL+ + ++ E+ + + A+I+T+G +V+D F+VTD G + DP + +
Sbjct: 809 MEVITPDRPGLLARVGQVLLEHRVRLTNAKIATLGERVEDVFFVTDEHGEQISDPAVCQA 868
Query: 324 IRRQI 328
+++ +
Sbjct: 869 LQQDL 873
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
+ T +E DRPGL + V VL + + NA+I T +R V VTD G I DP
Sbjct: 805 QRTVMEVITPDRPGLLARVGQVLLEHRVRLTNAKIATLGERVEDVFFVTDEH-GEQISDP 863
Query: 108 KRLSTIKELLFNVL 121
+++ L +L
Sbjct: 864 AVCQALQQDLCQML 877
>gi|153004974|ref|YP_001379299.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
gi|152028547|gb|ABS26315.1| metal dependent phosphohydrolase [Anaeromyxobacter sp. Fw109-5]
Length = 927
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 34/218 (15%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPK 108
++ + T DRPGL + V VLA ++ +AE+++ D + D
Sbjct: 731 YSELSLTARDRPGLLATVAGVLAAHRIDIQHAEVFSTPDGS----------------DLG 774
Query: 109 RLSTIKELLFNVLRGYDD-------FRKAKTSLSPPGIMNRERRLHQIMFDD-RDYERVE 160
RL+ +F LRG D+ +R A+T L+ ++ E L ++ R E
Sbjct: 775 RLAGRALDVFE-LRGPDERAVEPARWRAARTDLA--RVLAGEEGLDALLARRLRASSLPE 831
Query: 161 KAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT 219
K + RV K V + N + ++V+ + + DR LL + T ++ V + T
Sbjct: 832 KPLPRVPTK-----VVIDNDSARAHSVVDVFTADRVGLLHTLARTFYELGLSVDLARIAT 886
Query: 220 GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257
A FY+R DG P+ E RV+ L AA+ R
Sbjct: 887 EGHRASDAFYVRTPDGAPLEGE-RAARVVAALTAAVSR 923
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+++ T DRVGLL + R F E LS+ A I+T G + D FYV G P++
Sbjct: 854 VDVFTADRVGLLHTLARTFYELGLSVDLARIATEGHRASDAFYVRTPDGAPLE 906
>gi|296448846|ref|ZP_06890683.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
gi|296253644|gb|EFH00834.1| UTP-GlnB uridylyltransferase, GlnD [Methylosinus trichosporium
OB3b]
Length = 896
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ DRVGLL D+T +L+I A I T G + D+FYVTD+TG KI+ +
Sbjct: 808 IEVSGLDRVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVTDLTGG----KILSAS 863
Query: 325 RRQIGHTKLQVKRSTILAPKPPKE 348
R+ +KR + P +E
Sbjct: 864 RQA------TIKRQLLEVFAPARE 881
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 17/123 (13%)
Query: 15 RDKEVIDYIQQRL--ETDASFAPSLRSS------VGVMP--------TEEHTSIEFTGTD 58
R + V DYI++ L E S A + RS+ + P + T IE +G D
Sbjct: 755 RARRVADYIEKALRGEIAISEAVAARSAKDRSLAFDIAPDIVIDNSFSNVATVIEVSGLD 814
Query: 59 RPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLF 118
R GL ++ +++L+ N+ +A I T +RA +VTD TG I R +TIK L
Sbjct: 815 RVGLLFDLTNAISNLNLNIGSAHIVTFGERAVDSFYVTD-LTGGKILSASRQATIKRQLL 873
Query: 119 NVL 121
V
Sbjct: 874 EVF 876
>gi|284032664|ref|YP_003382595.1| UTP-GlnB uridylyltransferase, GlnD [Kribbella flavida DSM 17836]
gi|283811957|gb|ADB33796.1| UTP-GlnB uridylyltransferase, GlnD [Kribbella flavida DSM 17836]
Length = 752
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
L++ DR GLL DIT I+ A +ST+G + D FY+TD G+P+D
Sbjct: 683 LQIRAHDRPGLLYDITAAIASTGADIRSAHVSTLGAECVDVFYLTDGHGSPLD 735
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Query: 135 SPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL-NIEKDYTVITMRSKD 193
SPP + RL + D+ D R A K + +V +L + + TV+ +R+ D
Sbjct: 630 SPPDPVRLRDRLSVALRDNSDLVRRLAARDSSVRKGAASRVDLLPDASETATVLQIRAHD 689
Query: 194 RPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 244
RP LL+DI + + V+T E FY+ G P+ E R
Sbjct: 690 RPGLLYDITAAIASTGADIRSAHVSTLGAECVDVFYLTDGHGSPLDEEDAR 740
>gi|393722132|ref|ZP_10342059.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26605]
Length = 914
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 69/169 (40%), Gaps = 33/169 (19%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPIS 239
E+ T++T+ + D P L + I ++ + ++T R A F ++ G P
Sbjct: 720 ERGATLVTIYAADHPGLFYRIAGAISVAGGNIIDARIHTTRDGMALDNFLVQDPYGRPFD 779
Query: 240 SEAERERVIQCLEAAIERRA---------------SEGLEL-----------------EL 267
+ ER+ Q +E A+ R +E + E+
Sbjct: 780 EAPQLERLKQSIEDALANRGKMIDRLMAKPLPRPRAEAFAIVPNVLIDNKASNRFTVIEV 839
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR LL + ++ ++I A ++T G + DTFY+TD+TG+ +
Sbjct: 840 NARDRPALLHQLAYSLFQSRVTIHSAHVATYGERAVDTFYLTDLTGDKI 888
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 98/249 (39%), Gaps = 31/249 (12%)
Query: 17 KEVIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCN 76
++VID RL +A A L + V P T + D PGLF + ++ N
Sbjct: 693 EDVIDR-NARLVAEAGDA-QLSIAAQVYPERGATLVTIYAADHPGLFYRIAGAISVAGGN 750
Query: 77 VVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSP 136
+++A I T D A + G + +L +K+ + + L
Sbjct: 751 IIDARIHTTRDGMALDNFLVQDPYGRPFDEAPQLERLKQSIEDAL--------------- 795
Query: 137 PGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKD-YTVITMRSKDRP 195
NR + + ++M R E A V P V + N + +TVI + ++DRP
Sbjct: 796 ---ANRGKMIDRLMAKPLPRPRAE-AFAIV------PNVLIDNKASNRFTVIEVNARDRP 845
Query: 196 KLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQ--CLEA 253
LL + +L + + V T A FY+ + G I + A R + I+ L A
Sbjct: 846 ALLHQLAYSLFQSRVTIHSAHVATYGERAVDTFYLTDLTGDKIGA-ASRLKTIERRLLAA 904
Query: 254 AIERRASEG 262
A R ++
Sbjct: 905 AAGERMADA 913
>gi|251792356|ref|YP_003007081.1| PII uridylyl-transferase [Aggregatibacter aphrophilus NJ8700]
gi|422335916|ref|ZP_16416889.1| uridylyltransferase [Aggregatibacter aphrophilus F0387]
gi|247533748|gb|ACS96994.1| protein-P-II uridylyltransferase [Aggregatibacter aphrophilus
NJ8700]
gi|353346878|gb|EHB91162.1| uridylyltransferase [Aggregatibacter aphrophilus F0387]
Length = 866
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
E+EL DR GLL+D++ +F E L++ A+I+TIG K +D F +T+ G ++
Sbjct: 797 EMELFALDRAGLLADVSAVFCELELNLCNAKITTIGEKAEDFFILTNKEGRALN 850
>gi|315497085|ref|YP_004085889.1| utp-glnb uridylyltransferase, glnd [Asticcacaulis excentricus CB
48]
gi|315415097|gb|ADU11738.1| UTP-GlnB uridylyltransferase, GlnD [Asticcacaulis excentricus CB
48]
Length = 959
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 48/188 (25%)
Query: 55 TGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG--YAIKDPKRLST 112
TG DRPGLF+++ +L NVV A+++T A V + G + DP R+
Sbjct: 763 TGPDRPGLFADLARCFTNLGANVVGAQVFTSTTAQALDVFYVQDTQGKPFGHDDPGRIRQ 822
Query: 113 IKELLFNVLRG----------YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKA 162
+++ L + G + R A +++P ++FDD
Sbjct: 823 MEKALEKAVGGEAAAPLIHKAINAHRTAAFAIAP-----------TVVFDD--------- 862
Query: 163 VGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT 222
S PQ+T++ + +DRP LL D+ L + ++
Sbjct: 863 -------ESNPQMTIIEVS---------GRDRPGLLADVASVLARARLDTASAHIDCYGE 906
Query: 223 EAYQEFYI 230
A FY+
Sbjct: 907 RAVDAFYV 914
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 67/164 (40%), Gaps = 37/164 (22%)
Query: 1 MDVFNVIDCDGKKIR--DKEVIDYIQQRLETDA---SFAPSLRSSV--------GVMPT- 46
+DVF V D GK D I +++ LE + AP + ++ + PT
Sbjct: 799 LDVFYVQDTQGKPFGHDDPGRIRQMEKALEKAVGGEAAAPLIHKAINAHRTAAFAIAPTV 858
Query: 47 -------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 99
+ T IE +G DRPGL ++V +VLA + +A I + +RA +V DH
Sbjct: 859 VFDDESNPQMTIIEVSGRDRPGLLADVASVLARARLDTASAHIDCYGERAVDAFYVVDHF 918
Query: 100 TGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTS-LSPPGIMNR 142
T + +R D +A T L PP NR
Sbjct: 919 TRKQLTKAQR---------------DKVHRALTEVLDPPSAPNR 947
>gi|296282185|ref|ZP_06860183.1| PII uridylyl-transferase [Citromicrobium bathyomarinum JL354]
Length = 922
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 34/179 (18%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPIS 239
E+ T++T+ + D P + I + + + ++T RT A F ++ G P
Sbjct: 726 ERGATLVTVIAADHPGIFMRIAGAIHLVGGNIIDARIHTTRTGYAVDNFLVQDPLGRPFG 785
Query: 240 SEAERERVIQCLEAAI---------------ERRASEGLE-----------------LEL 267
+ + R+ + + + RR + E +E+
Sbjct: 786 EDDQLARIERSIADGLTGGVQLVPKLAKRPLPRRGAGAFEVQPFVAFDNDASHRFTVIEV 845
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIR 325
DR LL+ + R E I+ A I+ G + DTFYVTD+TG+ + DP ++++R
Sbjct: 846 GARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVTDLTGDKITDPGRLEALR 904
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T IE DRP L + + L + H + +A I + +RAA +VTD TG I DP R
Sbjct: 841 TVIEVGARDRPALLNRLARALFEQHAMIRSAHITHYGERAADTFYVTD-LTGDKITDPGR 899
Query: 110 LSTIKELL 117
L ++ L
Sbjct: 900 LEALRAAL 907
>gi|302781406|ref|XP_002972477.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
gi|302805113|ref|XP_002984308.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300148157|gb|EFJ14818.1| hypothetical protein SELMODRAFT_119690 [Selaginella moellendorffii]
gi|300159944|gb|EFJ26563.1| hypothetical protein SELMODRAFT_97374 [Selaginella moellendorffii]
Length = 236
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 86/214 (40%), Gaps = 29/214 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T +E + DR G + L DL NVV + + + +T +TG ++DP+
Sbjct: 46 TIVELSYGDRLGALLDTMKALKDLGLNVVKGSVAVSGKTKSNRLSITRAATGRKVEDPEL 105
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
L +I+ + + L Y K ++ +A G+ K
Sbjct: 106 LESIRLTIISNLLQYHPESSEKLAMG-------------------------EAFGKKPPK 140
Query: 170 S--SRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
+ +TV + +++T+ + D+P LL DIV +T V ++T A
Sbjct: 141 KIDVKTHITVTDQGPARSLLTIETADKPGLLLDIVEMITATSVTVESAEIDTEGLVARDR 200
Query: 228 FYIRHVDGLPISSEAERERVIQCLEAAIERRASE 261
F++ + G +++ E ++ CL + R SE
Sbjct: 201 FHVSY--GGAALTKSLAEVLVNCLRFHLRRSESE 232
>gi|291616343|ref|YP_003519085.1| GlnD [Pantoea ananatis LMG 20103]
gi|386080595|ref|YP_005994120.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
gi|291151373|gb|ADD75957.1| GlnD [Pantoea ananatis LMG 20103]
gi|354989776|gb|AER33900.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis PA13]
Length = 882
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 693 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 747
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P+S + +IQ LE AI RR + L+
Sbjct: 748 EPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHTDRR 806
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 807 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEEMRQ 866
Query: 323 SIRRQI 328
++++++
Sbjct: 867 TLQQRL 872
>gi|429105301|ref|ZP_19167170.1| [Protein-PII] uridylyltransferase [Cronobacter malonaticus 681]
gi|426292024|emb|CCJ93283.1| [Protein-PII] uridylyltransferase [Cronobacter malonaticus 681]
Length = 891
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 702 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 755
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + Q LE AI +R + +
Sbjct: 756 LEPDGSPLSPD-RHEAIRQGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 814
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 815 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 874
Query: 322 DSIRRQI 328
+R+++
Sbjct: 875 QEVRQRL 881
>gi|386393406|ref|ZP_10078187.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio sp. U5L]
gi|385734284|gb|EIG54482.1| UTP:GlnB (protein PII) uridylyltransferase [Desulfovibrio sp. U5L]
Length = 881
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ +DRVGLL DI R E L A++ T G+V+D FYV G V DP+ +
Sbjct: 805 IEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGADGRRVEDPEQAEE 864
Query: 324 IRRQIGH 330
I+ + H
Sbjct: 865 IKAALLH 871
>gi|418938172|ref|ZP_13491734.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium sp. PDO1-076]
gi|375055173|gb|EHS51446.1| UTP-GlnB uridylyltransferase, GlnD [Rhizobium sp. PDO1-076]
Length = 944
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ DR+G L++IT + SL I A I+T G KV DTFYV D+ G V
Sbjct: 842 IEVECLDRIGFLAEITAALADLSLDIHSARITTFGEKVIDTFYVMDLVGQKV 893
>gi|386014735|ref|YP_005933012.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
gi|327392794|dbj|BAK10216.1| protein-PII uridylyltransferase GlnD [Pantoea ananatis AJ13355]
Length = 882
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 693 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 747
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P+S + +IQ LE AI RR + L+
Sbjct: 748 EPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHTDRR 806
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 807 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEEMRQ 866
Query: 323 SIRRQI 328
++++++
Sbjct: 867 TLQQRL 872
>gi|317046980|ref|YP_004114628.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. At-9b]
gi|316948597|gb|ADU68072.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea sp. At-9b]
Length = 884
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 232 HVDGLPISSEAERERVIQCLEAAI---------ERRASEGLE------------------ 264
DG P++++ +IQ LE AI RR S L+
Sbjct: 750 EPDGSPLAAD-RHPMIIQALEQAITQTQWVPPRARRQSSRLKHFSVETEVNFLPTHTDRR 808
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++ +
Sbjct: 809 SYLELIALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERRALDAEMRN 868
Query: 323 SIRRQI 328
+++++
Sbjct: 869 VLQQRL 874
>gi|378768474|ref|YP_005196947.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
gi|365187960|emb|CCF10910.1| UTP-GlnB uridylyltransferase, GlnD [Pantoea ananatis LMG 5342]
Length = 882
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 693 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 747
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P+S + +IQ LE AI RR + L+
Sbjct: 748 EPDGSPLSPD-RHAMIIQALEQAITQREWVPPRTRRQAARLKHFSVDTEVNFLPTHTDRR 806
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 807 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERKALDEEMRQ 866
Query: 323 SIRRQI 328
++++++
Sbjct: 867 TLQQRL 872
>gi|16273605|ref|NP_439860.1| PII uridylyl-transferase [Haemophilus influenzae Rd KW20]
gi|260581059|ref|ZP_05848881.1| protein-P-II uridylyltransferase [Haemophilus influenzae RdAW]
gi|1169938|sp|P43919.1|GLND_HAEIN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|1574572|gb|AAC23362.1| uridylyl transferase (glnD) [Haemophilus influenzae Rd KW20]
gi|260092299|gb|EEW76240.1| protein-P-II uridylyltransferase [Haemophilus influenzae RdAW]
Length = 863
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 315 PV 316
+
Sbjct: 845 AL 846
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDH-STGYAIK 105
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A +T+ A +
Sbjct: 790 KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQALARE 849
Query: 106 DPKRLSTI 113
+ +RL+++
Sbjct: 850 ERERLNSV 857
>gi|418052914|ref|ZP_12690991.1| UTP-GlnB uridylyltransferase, GlnD [Mycobacterium rhodesiae JS60]
gi|353179702|gb|EHB45259.1| UTP-GlnB uridylyltransferase, GlnD [Mycobacterium rhodesiae JS60]
Length = 827
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 52/204 (25%)
Query: 187 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERER 246
+ M + DR LL L V VN+ A F + G P ++E R++
Sbjct: 628 VAMIAPDRRGLLSKAAGVLALNSLRVHSASVNSAEGSAINTFVVSPHFGAPPAAELLRQQ 687
Query: 247 VIQCLE------AAIERR-----------------------------------ASEG-LE 264
I L+ AA+E+R +SEG L
Sbjct: 688 FILALDGELDVIAALEKRDADAAQYGTGRVGEHKPAVPINAVPAPPRILWHAGSSEGQLI 747
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ T DR GLL+ +TR+F + I A+I+T+G V D F ++ N V +++
Sbjct: 748 VEIRTTDRTGLLALLTRVFERAAADIAWAKITTLGSSVVDAFGISVQAQNSV-----ETV 802
Query: 325 RRQIGHTKLQVKRSTILAPKPPKE 348
R Q L+ + +L PP +
Sbjct: 803 RAQ-----LERELYAVLPAPPPAK 821
>gi|325294777|ref|YP_004281291.1| uridylyltransferase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065225|gb|ADY73232.1| UTP-GlnB uridylyltransferase, GlnD [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 874
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ T DR+G+L IT++ E + ++RA I+T G +V D+FY+TD+ + D K++
Sbjct: 805 VEVSTYDRLGVLYAITKVLLEMNTRLRRAIIATEGNRVIDSFYITDMEYRKITDAKLLKE 864
Query: 324 IRRQI 328
I +I
Sbjct: 865 IEEKI 869
>gi|226327059|ref|ZP_03802577.1| hypothetical protein PROPEN_00920 [Proteus penneri ATCC 35198]
gi|225204277|gb|EEG86631.1| ACT domain protein [Proteus penneri ATCC 35198]
Length = 144
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+EL DR GLL+ I ++F + SLS+ A I+TIG +V+D F +TD ++ K+ D +
Sbjct: 71 MELFARDRPGLLAIIGKVFADLSLSLHGARITTIGERVEDFFVLTDSENKALNQKMKDEV 130
>gi|386826231|ref|ZP_10113338.1| (protein-PII) uridylyltransferase [Beggiatoa alba B18LD]
gi|386427115|gb|EIJ40943.1| (protein-PII) uridylyltransferase [Beggiatoa alba B18LD]
Length = 899
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 258 RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
R ++ LE+ T DR GLLS I + F + +K+A I+T+G +V+D F++TD
Sbjct: 807 RGNDHTILEVITTDRPGLLSRIAQAFVNCDVRLKKANIATLGSRVEDVFFITD 859
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 21/141 (14%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRL------ETDASFAPSLRS-----SVGVMPT--- 46
M F+V++ G +I D+E ++ I Q L +T F P R +PT
Sbjct: 743 MAGFSVLEESGAEIHDQERVEEILQALKDALSRDTSVPFYPINRRIPRQVKYFTVPTRIT 802
Query: 47 ------EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHST 100
+HT +E TDRPGL S + + + A I T R V +TD +
Sbjct: 803 FTQDRGNDHTILEVITTDRPGLLSRIAQAFVNCDVRLKKANIATLGSRVEDVFFITDRNN 862
Query: 101 GYAIKDPKRLSTIKELLFNVL 121
+ + +L ++E L VL
Sbjct: 863 -HLLYSSDQLDALREELSMVL 882
>gi|398801948|ref|ZP_10561179.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
gi|398090630|gb|EJL81097.1| (protein-PII) uridylyltransferase [Pantoea sp. GM01]
Length = 884
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 36/168 (21%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P++++ +IQ LE AI RR S L+
Sbjct: 750 EPDGSPLAAD-RHPLIIQALEQAITQTEWVPPRTRRQSARLKHFSVDTEVNFLPTHTDRR 808
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + D
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAD 856
>gi|357022083|ref|ZP_09084314.1| PII uridylyl-transferase [Mycobacterium thermoresistibile ATCC
19527]
gi|356479831|gb|EHI12968.1| PII uridylyl-transferase [Mycobacterium thermoresistibile ATCC
19527]
Length = 830
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 79/205 (38%), Gaps = 51/205 (24%)
Query: 187 ITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERER 246
+T+ + DR LL L V VN+ A F + G P ++ R++
Sbjct: 628 VTLVAPDRRGLLSKAAGVLALNSLRVHSASVNSHHGSAINTFVVSPHFGAPPAANLLRQQ 687
Query: 247 VIQCLE------AAIERRASEG-----------------------------------LEL 265
+I L+ AA+ERR +G L +
Sbjct: 688 LILALDGDLDVLAALERRDHDGAPGSHRPGEPAAAVPVIAAPAPPRVLWFDGSAPGELVV 747
Query: 266 ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTF--YVTDVTGNPVDPKIIDS 323
++ DR GLL+ +T +F + + I A+++T+G V D F V +TG DP +
Sbjct: 748 QIRAADRPGLLARLTAVFERDGVDIAWAKVTTLGAAVVDVFGIVVPALTGGTADPA---A 804
Query: 324 IRRQIGHTKLQVKRSTILAPKPPKE 348
+R ++ H V L PP E
Sbjct: 805 VRGELEHDLYAV-----LPTPPPAE 824
>gi|373468040|ref|ZP_09559325.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
gi|371756913|gb|EHO45715.1| protein-P-II uridylyltransferase [Haemophilus sp. oral taxon 851
str. F0397]
Length = 863
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ G+L+ +++IF E +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 791 EHTEMELVALDKPGVLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 850
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 851 REILRNVLYRNIG 863
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PG+ ++V + ++L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKPGVLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 848
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 849 QQR-----EILRNVL 858
>gi|319776024|ref|YP_004138512.1| uridylyltransferase [Haemophilus influenzae F3047]
gi|317450615|emb|CBY86834.1| uridylyltransferase [Haemophilus influenzae F3047]
Length = 863
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 315 PV 316
+
Sbjct: 845 AL 846
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALAR 848
Query: 107 PKR 109
+R
Sbjct: 849 EER 851
>gi|118579771|ref|YP_901021.1| UTP-GlnB uridylyltransferase GlnD [Pelobacter propionicus DSM 2379]
gi|118502481|gb|ABK98963.1| UTP-GlnB uridylyltransferase, GlnD [Pelobacter propionicus DSM
2379]
Length = 905
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 87/199 (43%), Gaps = 22/199 (11%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
D PGLFS + V+A N++ A+I T + + + G I D +++
Sbjct: 726 DMPGLFSRITGVMAANGINILGAQINTSRNGKVLDILQVNSPRGKIIGDENCWKKVRDDT 785
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTV 177
VL G D ++++ +R Q+M R R R++ +
Sbjct: 786 ERVLLGEADV---------AAMVDKRQRPSQLMV--RPAPRFPT---RIDFDN------- 824
Query: 178 LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLP 237
+ + YTVI + + D+ LL+ I TLT + + ++T + FY+R + G
Sbjct: 825 -QVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIFGHK 883
Query: 238 ISSEAERERVIQCLEAAIE 256
I EA+ E V + L++AI+
Sbjct: 884 IMDEAKLESVRERLKSAID 902
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 256 ERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
+ + SEG +++ T D+VGLL IT + L I ++IST +V D FYV D+ G+
Sbjct: 823 DNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIFGH 882
Query: 315 PV-DPKIIDSIRRQI 328
+ D ++S+R ++
Sbjct: 883 KIMDEAKLESVRERL 897
>gi|357635440|ref|ZP_09133318.1| metal dependent phosphohydrolase [Desulfovibrio sp. FW1012B]
gi|357583994|gb|EHJ49327.1| metal dependent phosphohydrolase [Desulfovibrio sp. FW1012B]
Length = 905
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ +DRVGLL DI R E L A++ T G+V+D FYV G V DP+ +
Sbjct: 829 IEVACDDRVGLLYDIARTLYELRLETHLAKVMTPAGRVRDVFYVRGADGRRVEDPEQAEE 888
Query: 324 IRRQIGH 330
I+ + H
Sbjct: 889 IKAALLH 895
>gi|420631353|ref|ZP_15120613.1| protein-P-II uridylyltransferase [Yersinia pestis PY-19]
gi|391510963|gb|EIR64418.1| protein-P-II uridylyltransferase [Yersinia pestis PY-19]
Length = 893
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 264
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQPPPRVRRLSPKLRHFSVPTEA 807
Query: 265 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 865
>gi|356548347|ref|XP_003542564.1| PREDICTED: uncharacterized protein LOC100816138 [Glycine max]
Length = 412
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 18/145 (12%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 230
+ D T++T+ D+ L D+ + + G V+T Y F++
Sbjct: 17 DGDPTLLTVNCPDKTGLGCDLCRIILFFGLNILRGDVSTDGKWCYIVFWVVGKQRTRWSL 76
Query: 231 ---RHVDGLPISSEAERERVIQCLEAAIE-RRASEGLELELCTEDRVGLLSDITRIFREN 286
R ++ P S A I + ++ + S+ L C DR GLL D+T + E
Sbjct: 77 LKKRLIEACPSFSSASG---ISYYRSDLQPSKPSDVFLLNFCCHDRKGLLHDVTEVLCEL 133
Query: 287 SLSIKRAEISTI-GGKVKDTFYVTD 310
L+IK+ ++ST GKV D F++TD
Sbjct: 134 ELTIKKVKVSTTPDGKVIDLFFITD 158
>gi|398795140|ref|ZP_10555055.1| (protein-PII) uridylyltransferase [Pantoea sp. YR343]
gi|398206971|gb|EJM93727.1| (protein-PII) uridylyltransferase [Pantoea sp. YR343]
Length = 884
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 36/168 (21%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 695 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 749
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P++++ +IQ LE AI RR S L+
Sbjct: 750 EPDGSPLAAD-RHPLIIQALEQAITQNEWVPPRTRRQSARLKHFSVDTEVNFLPTHTDRR 808
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + D
Sbjct: 809 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILAD 856
>gi|420852309|ref|ZP_15316947.1| protein-P-II uridylyltransferase, partial [Yersinia pestis PY-103]
gi|391732820|gb|EIT61338.1| protein-P-II uridylyltransferase, partial [Yersinia pestis PY-103]
Length = 891
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 264
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEA 807
Query: 265 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 865
>gi|329123179|ref|ZP_08251748.1| protein-P-II uridylyltransferase [Haemophilus aegyptius ATCC 11116]
gi|327471524|gb|EGF16968.1| protein-P-II uridylyltransferase [Haemophilus aegyptius ATCC 11116]
Length = 863
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
++ E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G
Sbjct: 785 LQENKKEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQFGQ 844
Query: 315 PV 316
+
Sbjct: 845 AL 846
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+ GL ++V + +L+ N++NA+I T ++A +T+ G A+
Sbjct: 790 KEHTEMELVALDKAGLLAQVSQIFTELNLNLLNAKITTVGEKAEDFFILTNQ-FGQALAR 848
Query: 107 PKR 109
+R
Sbjct: 849 EER 851
>gi|51597320|ref|YP_071511.1| PII uridylyl-transferase [Yersinia pseudotuberculosis IP 32953]
gi|81638764|sp|Q667I7.1|GLND_YERPS RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|51590602|emb|CAH22243.1| [protein-PII] uridylyltransferase [Yersinia pseudotuberculosis IP
32953]
Length = 893
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 264
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEA 807
Query: 265 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 865
>gi|345002318|ref|YP_004805172.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces sp. SirexAA-E]
gi|344317944|gb|AEN12632.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces sp. SirexAA-E]
Length = 816
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
+E+ +D GLL I R ++++ ++ A +ST+G D FYVTD G P+ P+
Sbjct: 748 IEVRAQDAPGLLHRIGRALEQSAVRVRSAHVSTLGANAVDAFYVTDPDGEPLVPE 802
>gi|108806513|ref|YP_650429.1| PII uridylyl-transferase [Yersinia pestis Antiqua]
gi|108813119|ref|YP_648886.1| PII uridylyl-transferase [Yersinia pestis Nepal516]
gi|145598953|ref|YP_001163029.1| PII uridylyl-transferase [Yersinia pestis Pestoides F]
gi|153946912|ref|YP_001399995.1| PII uridylyl-transferase [Yersinia pseudotuberculosis IP 31758]
gi|162421348|ref|YP_001607773.1| PII uridylyl-transferase [Yersinia pestis Angola]
gi|165927056|ref|ZP_02222888.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165939842|ref|ZP_02228382.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|166011922|ref|ZP_02232820.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166211324|ref|ZP_02237359.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167399773|ref|ZP_02305291.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167419478|ref|ZP_02311231.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167425260|ref|ZP_02317013.1| protein-P-II uridylyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229837749|ref|ZP_04457909.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Pestoides A]
gi|229840971|ref|ZP_04461130.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229843072|ref|ZP_04463222.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. India 195]
gi|229903561|ref|ZP_04518674.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Nepal516]
gi|270487342|ref|ZP_06204416.1| protein-P-II uridylyltransferase [Yersinia pestis KIM D27]
gi|294503059|ref|YP_003567121.1| (protein-PII) uridylyltransferase [Yersinia pestis Z176003]
gi|384121499|ref|YP_005504119.1| (protein-PII) uridylyltransferase [Yersinia pestis D106004]
gi|384125673|ref|YP_005508287.1| (protein-PII) uridylyltransferase [Yersinia pestis D182038]
gi|384141091|ref|YP_005523793.1| PII uridylyl-transferase [Yersinia pestis A1122]
gi|384413672|ref|YP_005623034.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|420545665|ref|ZP_15043744.1| protein-P-II uridylyltransferase [Yersinia pestis PY-01]
gi|420550968|ref|ZP_15048489.1| protein-P-II uridylyltransferase [Yersinia pestis PY-02]
gi|420556475|ref|ZP_15053365.1| protein-P-II uridylyltransferase [Yersinia pestis PY-03]
gi|420562065|ref|ZP_15058261.1| protein-P-II uridylyltransferase [Yersinia pestis PY-04]
gi|420567089|ref|ZP_15062800.1| protein-P-II uridylyltransferase [Yersinia pestis PY-05]
gi|420572758|ref|ZP_15067950.1| protein-P-II uridylyltransferase [Yersinia pestis PY-06]
gi|420578086|ref|ZP_15072772.1| protein-P-II uridylyltransferase [Yersinia pestis PY-07]
gi|420583421|ref|ZP_15077624.1| protein-P-II uridylyltransferase [Yersinia pestis PY-08]
gi|420588573|ref|ZP_15082266.1| protein-P-II uridylyltransferase [Yersinia pestis PY-09]
gi|420593889|ref|ZP_15087058.1| protein-P-II uridylyltransferase [Yersinia pestis PY-10]
gi|420599592|ref|ZP_15092159.1| protein-P-II uridylyltransferase [Yersinia pestis PY-11]
gi|420605051|ref|ZP_15097038.1| protein-P-II uridylyltransferase [Yersinia pestis PY-12]
gi|420610412|ref|ZP_15101885.1| protein-P-II uridylyltransferase [Yersinia pestis PY-13]
gi|420615712|ref|ZP_15106577.1| protein-P-II uridylyltransferase [Yersinia pestis PY-14]
gi|420621124|ref|ZP_15111351.1| protein-P-II uridylyltransferase [Yersinia pestis PY-15]
gi|420626166|ref|ZP_15115918.1| protein-P-II uridylyltransferase [Yersinia pestis PY-16]
gi|420636457|ref|ZP_15125179.1| protein-P-II uridylyltransferase [Yersinia pestis PY-25]
gi|420642053|ref|ZP_15130233.1| protein-P-II uridylyltransferase [Yersinia pestis PY-29]
gi|420647183|ref|ZP_15134929.1| protein-P-II uridylyltransferase [Yersinia pestis PY-32]
gi|420652835|ref|ZP_15140002.1| protein-P-II uridylyltransferase [Yersinia pestis PY-34]
gi|420658345|ref|ZP_15144958.1| protein-P-II uridylyltransferase [Yersinia pestis PY-36]
gi|420663678|ref|ZP_15149726.1| protein-P-II uridylyltransferase [Yersinia pestis PY-42]
gi|420668650|ref|ZP_15154232.1| protein-P-II uridylyltransferase [Yersinia pestis PY-45]
gi|420673944|ref|ZP_15159049.1| protein-P-II uridylyltransferase [Yersinia pestis PY-46]
gi|420679489|ref|ZP_15164079.1| protein-P-II uridylyltransferase [Yersinia pestis PY-47]
gi|420684734|ref|ZP_15168782.1| protein-P-II uridylyltransferase [Yersinia pestis PY-48]
gi|420689909|ref|ZP_15173366.1| protein-P-II uridylyltransferase [Yersinia pestis PY-52]
gi|420695728|ref|ZP_15178458.1| protein-P-II uridylyltransferase [Yersinia pestis PY-53]
gi|420701095|ref|ZP_15183052.1| protein-P-II uridylyltransferase [Yersinia pestis PY-54]
gi|420707106|ref|ZP_15187933.1| protein-P-II uridylyltransferase [Yersinia pestis PY-55]
gi|420712418|ref|ZP_15192723.1| protein-P-II uridylyltransferase [Yersinia pestis PY-56]
gi|420717821|ref|ZP_15197459.1| protein-P-II uridylyltransferase [Yersinia pestis PY-58]
gi|420723425|ref|ZP_15202276.1| protein-P-II uridylyltransferase [Yersinia pestis PY-59]
gi|420729057|ref|ZP_15207305.1| protein-P-II uridylyltransferase [Yersinia pestis PY-60]
gi|420734102|ref|ZP_15211856.1| protein-P-II uridylyltransferase [Yersinia pestis PY-61]
gi|420739572|ref|ZP_15216786.1| protein-P-II uridylyltransferase [Yersinia pestis PY-63]
gi|420744908|ref|ZP_15221485.1| protein-P-II uridylyltransferase [Yersinia pestis PY-64]
gi|420750699|ref|ZP_15226436.1| protein-P-II uridylyltransferase [Yersinia pestis PY-65]
gi|420755963|ref|ZP_15231009.1| protein-P-II uridylyltransferase [Yersinia pestis PY-66]
gi|420761839|ref|ZP_15235802.1| protein-P-II uridylyltransferase [Yersinia pestis PY-71]
gi|420767061|ref|ZP_15240513.1| protein-P-II uridylyltransferase [Yersinia pestis PY-72]
gi|420772050|ref|ZP_15244994.1| protein-P-II uridylyltransferase [Yersinia pestis PY-76]
gi|420777488|ref|ZP_15249858.1| protein-P-II uridylyltransferase [Yersinia pestis PY-88]
gi|420782988|ref|ZP_15254671.1| protein-P-II uridylyltransferase [Yersinia pestis PY-89]
gi|420788341|ref|ZP_15259387.1| protein-P-II uridylyltransferase [Yersinia pestis PY-90]
gi|420793815|ref|ZP_15264328.1| protein-P-II uridylyltransferase [Yersinia pestis PY-91]
gi|420798934|ref|ZP_15268933.1| protein-P-II uridylyltransferase [Yersinia pestis PY-92]
gi|420804282|ref|ZP_15273744.1| protein-P-II uridylyltransferase [Yersinia pestis PY-93]
gi|420809549|ref|ZP_15278518.1| protein-P-II uridylyltransferase [Yersinia pestis PY-94]
gi|420815238|ref|ZP_15283613.1| protein-P-II uridylyltransferase [Yersinia pestis PY-95]
gi|420820411|ref|ZP_15288296.1| protein-P-II uridylyltransferase [Yersinia pestis PY-96]
gi|420825508|ref|ZP_15292851.1| protein-P-II uridylyltransferase [Yersinia pestis PY-98]
gi|420831275|ref|ZP_15298064.1| protein-P-II uridylyltransferase [Yersinia pestis PY-99]
gi|420836129|ref|ZP_15302443.1| protein-P-II uridylyltransferase [Yersinia pestis PY-100]
gi|420841271|ref|ZP_15307101.1| protein-P-II uridylyltransferase [Yersinia pestis PY-101]
gi|420846889|ref|ZP_15312173.1| protein-P-II uridylyltransferase [Yersinia pestis PY-102]
gi|420857822|ref|ZP_15321636.1| protein-P-II uridylyltransferase [Yersinia pestis PY-113]
gi|421762492|ref|ZP_16199289.1| PII uridylyl-transferase [Yersinia pestis INS]
gi|21362571|sp|Q8ZH68.2|GLND_YERPE RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|122980003|sp|Q1CFE4.1|GLND_YERPN RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|123072950|sp|Q1CAN8.1|GLND_YERPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166232257|sp|A4TL94.1|GLND_YERPP RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|166990448|sp|A7FFG7.1|GLND_YERP3 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|238687289|sp|A9R397.1|GLND_YERPG RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|108776767|gb|ABG19286.1| (protein-PII) uridylyltransferase [Yersinia pestis Nepal516]
gi|108778426|gb|ABG12484.1| (protein-PII) uridylyltransferase [Yersinia pestis Antiqua]
gi|145210649|gb|ABP40056.1| (protein-PII) uridylyltransferase [Yersinia pestis Pestoides F]
gi|152958407|gb|ABS45868.1| protein-P-II uridylyltransferase [Yersinia pseudotuberculosis IP
31758]
gi|162354163|gb|ABX88111.1| protein-P-II uridylyltransferase [Yersinia pestis Angola]
gi|165912245|gb|EDR30882.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. IP275]
gi|165920952|gb|EDR38176.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165989188|gb|EDR41489.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166207095|gb|EDR51575.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166962219|gb|EDR58240.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050481|gb|EDR61889.1| protein-P-II uridylyltransferase [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|167055660|gb|EDR65444.1| protein-P-II uridylyltransferase [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229679331|gb|EEO75434.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Nepal516]
gi|229689948|gb|EEO82007.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. India 195]
gi|229697337|gb|EEO87384.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229704126|gb|EEO91138.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
Pestoides A]
gi|262361095|gb|ACY57816.1| (protein-PII) uridylyltransferase [Yersinia pestis D106004]
gi|262365337|gb|ACY61894.1| (protein-PII) uridylyltransferase [Yersinia pestis D182038]
gi|270335846|gb|EFA46623.1| protein-P-II uridylyltransferase [Yersinia pestis KIM D27]
gi|294353518|gb|ADE63859.1| (protein-PII) uridylyltransferase [Yersinia pestis Z176003]
gi|320014176|gb|ADV97747.1| uridylyltransferase/uridylyl-removing enzyme [Yersinia pestis
biovar Medievalis str. Harbin 35]
gi|342856220|gb|AEL74773.1| PII uridylyl-transferase [Yersinia pestis A1122]
gi|391429975|gb|EIQ91756.1| protein-P-II uridylyltransferase [Yersinia pestis PY-01]
gi|391431125|gb|EIQ92735.1| protein-P-II uridylyltransferase [Yersinia pestis PY-02]
gi|391433526|gb|EIQ94853.1| protein-P-II uridylyltransferase [Yersinia pestis PY-03]
gi|391446182|gb|EIR06245.1| protein-P-II uridylyltransferase [Yersinia pestis PY-04]
gi|391446790|gb|EIR06785.1| protein-P-II uridylyltransferase [Yersinia pestis PY-05]
gi|391450718|gb|EIR10319.1| protein-P-II uridylyltransferase [Yersinia pestis PY-06]
gi|391462288|gb|EIR20815.1| protein-P-II uridylyltransferase [Yersinia pestis PY-07]
gi|391463605|gb|EIR21997.1| protein-P-II uridylyltransferase [Yersinia pestis PY-08]
gi|391465595|gb|EIR23774.1| protein-P-II uridylyltransferase [Yersinia pestis PY-09]
gi|391479011|gb|EIR35853.1| protein-P-II uridylyltransferase [Yersinia pestis PY-10]
gi|391480139|gb|EIR36844.1| protein-P-II uridylyltransferase [Yersinia pestis PY-11]
gi|391480383|gb|EIR37060.1| protein-P-II uridylyltransferase [Yersinia pestis PY-12]
gi|391494241|gb|EIR49495.1| protein-P-II uridylyltransferase [Yersinia pestis PY-13]
gi|391495407|gb|EIR50510.1| protein-P-II uridylyltransferase [Yersinia pestis PY-15]
gi|391498131|gb|EIR52924.1| protein-P-II uridylyltransferase [Yersinia pestis PY-14]
gi|391510216|gb|EIR63773.1| protein-P-II uridylyltransferase [Yersinia pestis PY-16]
gi|391515089|gb|EIR68138.1| protein-P-II uridylyltransferase [Yersinia pestis PY-25]
gi|391525731|gb|EIR77846.1| protein-P-II uridylyltransferase [Yersinia pestis PY-29]
gi|391528582|gb|EIR80384.1| protein-P-II uridylyltransferase [Yersinia pestis PY-34]
gi|391529444|gb|EIR81128.1| protein-P-II uridylyltransferase [Yersinia pestis PY-32]
gi|391542257|gb|EIR92732.1| protein-P-II uridylyltransferase [Yersinia pestis PY-36]
gi|391544003|gb|EIR94268.1| protein-P-II uridylyltransferase [Yersinia pestis PY-42]
gi|391544974|gb|EIR95120.1| protein-P-II uridylyltransferase [Yersinia pestis PY-45]
gi|391559083|gb|EIS07898.1| protein-P-II uridylyltransferase [Yersinia pestis PY-46]
gi|391559648|gb|EIS08382.1| protein-P-II uridylyltransferase [Yersinia pestis PY-47]
gi|391561235|gb|EIS09787.1| protein-P-II uridylyltransferase [Yersinia pestis PY-48]
gi|391574272|gb|EIS21199.1| protein-P-II uridylyltransferase [Yersinia pestis PY-52]
gi|391574858|gb|EIS21685.1| protein-P-II uridylyltransferase [Yersinia pestis PY-53]
gi|391586651|gb|EIS31929.1| protein-P-II uridylyltransferase [Yersinia pestis PY-55]
gi|391587211|gb|EIS32406.1| protein-P-II uridylyltransferase [Yersinia pestis PY-54]
gi|391590188|gb|EIS34972.1| protein-P-II uridylyltransferase [Yersinia pestis PY-56]
gi|391603614|gb|EIS46779.1| protein-P-II uridylyltransferase [Yersinia pestis PY-60]
gi|391603932|gb|EIS47047.1| protein-P-II uridylyltransferase [Yersinia pestis PY-58]
gi|391605164|gb|EIS48082.1| protein-P-II uridylyltransferase [Yersinia pestis PY-59]
gi|391617994|gb|EIS59482.1| protein-P-II uridylyltransferase [Yersinia pestis PY-61]
gi|391618549|gb|EIS59951.1| protein-P-II uridylyltransferase [Yersinia pestis PY-63]
gi|391625563|gb|EIS66037.1| protein-P-II uridylyltransferase [Yersinia pestis PY-64]
gi|391629625|gb|EIS69527.1| protein-P-II uridylyltransferase [Yersinia pestis PY-65]
gi|391641029|gb|EIS79505.1| protein-P-II uridylyltransferase [Yersinia pestis PY-71]
gi|391643627|gb|EIS81779.1| protein-P-II uridylyltransferase [Yersinia pestis PY-72]
gi|391643718|gb|EIS81855.1| protein-P-II uridylyltransferase [Yersinia pestis PY-66]
gi|391653265|gb|EIS90247.1| protein-P-II uridylyltransferase [Yersinia pestis PY-76]
gi|391659125|gb|EIS95461.1| protein-P-II uridylyltransferase [Yersinia pestis PY-88]
gi|391664031|gb|EIS99803.1| protein-P-II uridylyltransferase [Yersinia pestis PY-89]
gi|391666070|gb|EIT01582.1| protein-P-II uridylyltransferase [Yersinia pestis PY-90]
gi|391672015|gb|EIT06896.1| protein-P-II uridylyltransferase [Yersinia pestis PY-91]
gi|391684241|gb|EIT17939.1| protein-P-II uridylyltransferase [Yersinia pestis PY-93]
gi|391685591|gb|EIT19109.1| protein-P-II uridylyltransferase [Yersinia pestis PY-92]
gi|391686547|gb|EIT19957.1| protein-P-II uridylyltransferase [Yersinia pestis PY-94]
gi|391698275|gb|EIT30597.1| protein-P-II uridylyltransferase [Yersinia pestis PY-95]
gi|391701914|gb|EIT33863.1| protein-P-II uridylyltransferase [Yersinia pestis PY-96]
gi|391702855|gb|EIT34691.1| protein-P-II uridylyltransferase [Yersinia pestis PY-98]
gi|391712365|gb|EIT43251.1| protein-P-II uridylyltransferase [Yersinia pestis PY-99]
gi|391718715|gb|EIT48932.1| protein-P-II uridylyltransferase [Yersinia pestis PY-100]
gi|391719043|gb|EIT49220.1| protein-P-II uridylyltransferase [Yersinia pestis PY-101]
gi|391729901|gb|EIT58834.1| protein-P-II uridylyltransferase [Yersinia pestis PY-102]
gi|391736472|gb|EIT64490.1| protein-P-II uridylyltransferase [Yersinia pestis PY-113]
gi|411176698|gb|EKS46713.1| PII uridylyl-transferase [Yersinia pestis INS]
Length = 893
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 264
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEA 807
Query: 265 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 865
>gi|261868214|ref|YP_003256136.1| PII uridylyl-transferase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|415769713|ref|ZP_11484409.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|416073623|ref|ZP_11584278.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444337189|ref|ZP_21151201.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|261413546|gb|ACX82917.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|348007235|gb|EGY47562.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|348657339|gb|EGY74933.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|443547389|gb|ELT56891.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 863
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 34/180 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY--QEFYIRHVDG--LPI-- 238
T I + +KDRP L +V T+ + + + T + + Y F + +DG LP
Sbjct: 687 TEIFIYTKDRPNLFHKVVSTIGAKKLSIHDAQIITAK-DGYVLDSFIVTELDGSVLPFDR 745
Query: 239 -------------SSEAERERVIQCLEAA----------IERRASEGLELELCTEDRVGL 275
S ++R+ + + A + ++ E+EL D+ GL
Sbjct: 746 RRMLEDALTESLTSDAVNKQRLRENHQLAHFHVKTEVRFLNLEKTDQTEMELFALDQAGL 805
Query: 276 LSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQV 335
L+D++ +F E L++ A+I+TIG K +D F +T N VD + + R ++ + LQ+
Sbjct: 806 LADVSAVFCELELNLLNAKITTIGEKAEDFFILT----NKVDKALNEEERARLLNRLLQI 861
>gi|186896425|ref|YP_001873537.1| PII uridylyl-transferase [Yersinia pseudotuberculosis PB1/+]
gi|186699451|gb|ACC90080.1| UTP-GlnB uridylyltransferase, GlnD [Yersinia pseudotuberculosis
PB1/+]
Length = 912
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 709 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 768
Query: 224 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 264
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 769 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEA 826
Query: 265 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 827 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 884
>gi|261822601|ref|YP_003260707.1| PII uridylyl-transferase [Pectobacterium wasabiae WPP163]
gi|261606614|gb|ACX89100.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium wasabiae WPP163]
Length = 903
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E + +P V + + + T I + S DRP L + L V + T R
Sbjct: 698 LEHDTDKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 757
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 264
A F + DG P++ + E + Q LE ++ RR S L
Sbjct: 758 AMDTFIVLEPDGSPLAQD-RHEMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNF 816
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
+EL D+ GLL+ I IF + +LS+ A ISTIG +V+D F + D
Sbjct: 817 LPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRR 876
Query: 315 PVDPKI 320
+ P +
Sbjct: 877 ALKPDL 882
>gi|444346785|ref|ZP_21154747.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|443541263|gb|ELT51713.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 863
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 34/180 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY--QEFYIRHVDG--LPI-- 238
T I + +KDRP L +V T+ + + + T + + Y F + +DG LP
Sbjct: 687 TEIFIYTKDRPNLFHKVVSTIGAKKLSIHDAQIITAK-DGYVLDSFIVTELDGSVLPFDR 745
Query: 239 -------------SSEAERERVIQCLEAA----------IERRASEGLELELCTEDRVGL 275
S ++R+ + + A + ++ E+EL D+ GL
Sbjct: 746 RRMLEDALTESLTSDAVNKQRLRENHQLAHFHVKTEVRFLNLEKTDQTEMELFALDQAGL 805
Query: 276 LSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQV 335
L+D++ +F E L++ A+I+TIG K +D F +T N VD + + R ++ + LQ+
Sbjct: 806 LADVSAVFCELELNLLNAKITTIGEKAEDFFILT----NKVDKALNEEERARLLNRLLQI 861
>gi|385872915|gb|AFI91435.1| [Protein-PII] uridylyltransferase [Pectobacterium sp. SCC3193]
Length = 903
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 76/186 (40%), Gaps = 32/186 (17%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E + +P V + + + T I + S DRP L + L V + T R
Sbjct: 698 LEHDTDKPLVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 757
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 264
A F + DG P++ + E + Q LE ++ RR S L
Sbjct: 758 AMDTFIVLEPDGSPLAQD-RHEMIRQALEQSLTHRHYQHPRVRRPSPKLRHFSVPTEVNF 816
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
+EL D+ GLL+ I IF + +LS+ A ISTIG +V+D F + D
Sbjct: 817 LPTHTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRR 876
Query: 315 PVDPKI 320
+ P +
Sbjct: 877 ALKPDL 882
>gi|365864086|ref|ZP_09403779.1| PII uridylyl-transferase [Streptomyces sp. W007]
gi|364006483|gb|EHM27530.1| PII uridylyl-transferase [Streptomyces sp. W007]
Length = 814
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 253 AAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT 312
AA RRA+ +E+ +D GLL I R +++ ++ A +ST+G D FYVT
Sbjct: 737 AAGSRRATV---IEVRAQDAPGLLHRIGRALEGSAVRVRSAHVSTLGANAVDAFYVTGTD 793
Query: 313 GNPVDPKIIDSIRRQI 328
G P+ P + R++
Sbjct: 794 GEPLSPDRAAEVAREV 809
>gi|260913600|ref|ZP_05920076.1| protein-P-II uridylyltransferase [Pasteurella dagmatis ATCC 43325]
gi|260632139|gb|EEX50314.1| protein-P-II uridylyltransferase [Pasteurella dagmatis ATCC 43325]
Length = 872
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 34/47 (72%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
E+ELC D+ GLL+ ++++F E L++ A+I+T+G K +D F +T+
Sbjct: 802 EMELCALDQTGLLAKVSQVFSELKLNLLNAKITTVGEKAEDFFILTN 848
>gi|22127015|ref|NP_670438.1| PII uridylyl-transferase [Yersinia pestis KIM10+]
gi|45442577|ref|NP_994116.1| PII uridylyl-transferase [Yersinia pestis biovar Microtus str.
91001]
gi|149366957|ref|ZP_01888990.1| [protein-PII] uridylyltransferase [Yersinia pestis CA88-4125]
gi|167468856|ref|ZP_02333560.1| PII uridylyl-transferase [Yersinia pestis FV-1]
gi|170023313|ref|YP_001719818.1| PII uridylyl-transferase [Yersinia pseudotuberculosis YPIII]
gi|218928210|ref|YP_002346085.1| PII uridylyl-transferase [Yersinia pestis CO92]
gi|21960062|gb|AAM86689.1|AE013914_9 protein PII [Yersinia pestis KIM10+]
gi|45437442|gb|AAS62993.1| [protein-PII] uridylyltransferase [Yersinia pestis biovar Microtus
str. 91001]
gi|115346821|emb|CAL19707.1| [protein-PII] uridylyltransferase [Yersinia pestis CO92]
gi|149290571|gb|EDM40647.1| [protein-PII] uridylyltransferase [Yersinia pestis CA88-4125]
gi|169749847|gb|ACA67365.1| UTP-GlnB uridylyltransferase, GlnD [Yersinia pseudotuberculosis
YPIII]
Length = 912
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 35/178 (19%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 709 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 768
Query: 224 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER----------RASEGLE-------- 264
A F + DG P++ + R +I L+ AI R R S L
Sbjct: 769 AMDTFIVLEPDGSPLAQD--RHPIISHALQQAINRSDYQHPPRVRRLSPKLRHFSVPTEA 826
Query: 265 ------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + +IF + LS+ A I+TIG +V+D F + D
Sbjct: 827 NFLPTHNERRTYLELIALDQPGLLARVGKIFADLGLSLHSARITTIGERVEDLFVLAD 884
>gi|153871765|ref|ZP_02000853.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Beggiatoa sp. PS]
gi|152071768|gb|EDN69146.1| UTP-GlnB (protein PII) uridylyltransferase, GlnD [Beggiatoa sp. PS]
Length = 891
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 22/139 (15%)
Query: 4 FNVIDCDGKKIRDKEVIDYIQQRL-------ETDASFAPSLRSSVGVMP----------- 45
+ VI+ DG +I KE ++ I Q L ET+A F P R G +
Sbjct: 750 YTVIEDDGTEITPKEQVEKILQSLTQALSRDETNAPFYPINRRIPGHLKHFPELTRVTFT 809
Query: 46 ---TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGY 102
HT+++ TDRPG+ S + V A+I T R V VTD+ +
Sbjct: 810 QDHINNHTTVQVITTDRPGVLSRIAQAFLTCQIRVKKAKIATFGTRVEDVFFVTDYE-NH 868
Query: 103 AIKDPKRLSTIKELLFNVL 121
A+ K+L +++ L +L
Sbjct: 869 ALYSSKQLDCLRDKLSELL 887
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ T DR G+LS I + F + +K+A+I+T G +V+D F+VTD + + K +D
Sbjct: 819 VQVITTDRPGVLSRIAQAFLTCQIRVKKAKIATFGTRVEDVFFVTDYENHALYSSKQLDC 878
Query: 324 IRRQIG 329
+R ++
Sbjct: 879 LRDKLS 884
>gi|387127004|ref|YP_006295609.1| (Protein-PII) uridylyltransferase [Methylophaga sp. JAM1]
gi|386274066|gb|AFI83964.1| (Protein-PII) uridylyltransferase [Methylophaga sp. JAM1]
Length = 866
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 82/180 (45%), Gaps = 25/180 (13%)
Query: 157 ERVEKAVGRVEDKSSRPQVTVLNIEKDYTV-ITMRSKDRPKLLFDIVCTLTDMQYVVFHG 215
E V + GR+E+ P + V +T+ + + +++R L + +L +Q +
Sbjct: 664 EIVWQTNGRLENPEQEPLILVRPHSDRHTLELFIYAQNRQALFAAMTASLEQLQLNILDA 723
Query: 216 MVN-TGRTEAYQEFYI-----RHVDGL-PISSEAERERVIQCLEAAIERRASEGLE---- 264
+N G A F I R+ D + +S + E +I + + R ++ +
Sbjct: 724 KININGDDSALNTFIINGAQQRYEDIINAVSKQLANEELISGYKPQLIPRTTKLFKTEPV 783
Query: 265 -------------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDV 311
+EL T DR GLLS + ++F + + + A++ T+G +V+D F++T++
Sbjct: 784 IKFTTNIQQNHTVMELYTHDRPGLLSAVAQVFLSHQIQVINAKMVTLGDQVEDVFFITNL 843
>gi|329936726|ref|ZP_08286433.1| protein P-II uridylyltransferase [Streptomyces griseoaurantiacus
M045]
gi|329303956|gb|EGG47839.1| protein P-II uridylyltransferase [Streptomyces griseoaurantiacus
M045]
Length = 829
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ +D GLL I R + + ++ A ST+G DT YVT TG+P+ P+ S+
Sbjct: 760 IEVRAQDAPGLLHRIGRALEKAGVRVRSAHASTLGANAVDTVYVTGPTGSPLPPQEATSV 819
Query: 325 RRQI 328
R +
Sbjct: 820 ARAL 823
>gi|345009603|ref|YP_004811957.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
gi|344035952|gb|AEM81677.1| UTP-GlnB uridylyltransferase, GlnD [Streptomyces violaceusniger Tu
4113]
Length = 871
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 318
+E+ +D GLL I R ++++ A ST+G D FYVTD +G P+ P
Sbjct: 798 IEVRAQDAPGLLHRIGRALEHTGVAVRSAHASTLGANAVDAFYVTDSSGAPLKP 851
>gi|197118260|ref|YP_002138687.1| GlnB (protein PII) uridylyltransferase, GlnD [Geobacter
bemidjiensis Bem]
gi|197087620|gb|ACH38891.1| nitrogen regulatory protein P-II uridylyltransferase, GlnD
[Geobacter bemidjiensis Bem]
Length = 894
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 82/200 (41%), Gaps = 24/200 (12%)
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELL 117
D PGLFS + V+A N++ A+I T+ + + G+ I + R + + L
Sbjct: 717 DIPGLFSMITGVVAANGMNILGAQIHTNTNEKVLDILQVGSPQGFVITEESRWTRFQNDL 776
Query: 118 FNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAV-GRVEDKSSRPQVT 176
VL G P I++ E+ + V RVE +
Sbjct: 777 RQVLEGKVKVSALVAKRHRPSILS---------------EKAKPTVPARVEIDN------ 815
Query: 177 VLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL 236
+ DYTVI + + D+ LL+ I TLT + + ++T + FY++ + G
Sbjct: 816 --EVSSDYTVIDIYAHDKIGLLYGITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQ 873
Query: 237 PISSEAERERVIQCLEAAIE 256
I + + E + + L A++
Sbjct: 874 KIMNPGKLEEIRKELLDAVD 893
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ D++GLL IT L I ++IST +V D FYV D+ G + +P ++
Sbjct: 824 IDIYAHDKIGLLYGITSTLTRLGLYIGVSKISTKVDQVADVFYVKDIFGQKIMNPGKLEE 883
Query: 324 IRRQI 328
IR+++
Sbjct: 884 IRKEL 888
>gi|253687335|ref|YP_003016525.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium carotovorum
subsp. carotovorum PC1]
gi|259492002|sp|C6DAI1.1|GLND_PECCP RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|251753913|gb|ACT11989.1| UTP-GlnB uridylyltransferase, GlnD [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 904
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 67/166 (40%), Gaps = 31/166 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 243
T I + S DRP L + L V + T R A F + DG P++ +
Sbjct: 719 TEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLAQD-R 777
Query: 244 RERVIQCLEAAIE---------RRASEGLE--------------------LELCTEDRVG 274
E + LE A+ RR S L +EL D+ G
Sbjct: 778 HEMIRHALEQALTQRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTDRRSYMELSALDQPG 837
Query: 275 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
LL+ I IF + +LS+ A ISTIG +V+D F + D + P++
Sbjct: 838 LLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRRALKPEL 883
>gi|392944986|ref|ZP_10310628.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
gi|392288280|gb|EIV94304.1| UTP:GlnB (protein PII) uridylyltransferase [Frankia sp. QA3]
Length = 807
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 232
PQV + TV+ +R+ DR +LF IV L+ ++ V +V T + FY++
Sbjct: 683 PQVIFDDGLGSTTVLEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFYVQE 742
Query: 233 VDGLPISSEAERERVIQCLEAAI 255
DG P++ +A R + + + AA+
Sbjct: 743 ADGRPVADDARRREIARAVLAAL 765
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
LE+ DR G+L I R L + A ++T+G V D FYV + G PV D+
Sbjct: 697 LEVRAPDRAGVLFRIVRALSGLRLDVATAIVATLGLDVVDAFYVQEADGRPV---ADDAR 753
Query: 325 RRQIGHTKL 333
RR+I L
Sbjct: 754 RREIARAVL 762
>gi|294635116|ref|ZP_06713627.1| protein-P-II uridylyltransferase [Edwardsiella tarda ATCC 23685]
gi|451965796|ref|ZP_21919052.1| [protein-PII] uridylyltransferase [Edwardsiella tarda NBRC 105688]
gi|291091493|gb|EFE24054.1| protein-P-II uridylyltransferase [Edwardsiella tarda ATCC 23685]
gi|451315368|dbj|GAC64414.1| [protein-PII] uridylyltransferase [Edwardsiella tarda NBRC 105688]
Length = 884
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 31/183 (16%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGLPISSEAE 243
T I + S DRP L + L V + T R A F + DG P++ +
Sbjct: 702 TEIFIYSPDRPYLFAAVAGELDRRNLSVHDAQIFTNRDNYAMDTFVVLEPDGSPLALD-R 760
Query: 244 RERVIQCLEAAIE---------RRASEGLE--------------------LELCTEDRVG 274
+ + LE A+ R AS L +EL DR G
Sbjct: 761 HSTIRRALEQALTQASYQPPRVRHASARLRHFTVPTAVSFLPAHNTRRSYMELVALDRPG 820
Query: 275 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQ 334
LL+ I IF E LS+ A I+TIG +V+D F + D + P++ + +++ T L
Sbjct: 821 LLARIGEIFAEMGLSLHGARITTIGERVEDLFILADGERRALTPEMQHELAQRLTETLLS 880
Query: 335 VKR 337
+
Sbjct: 881 ADK 883
>gi|269138091|ref|YP_003294791.1| PII uridylyl-transferase [Edwardsiella tarda EIB202]
gi|387866822|ref|YP_005698291.1| uridylyltransferase [Edwardsiella tarda FL6-60]
gi|267983751|gb|ACY83580.1| PII uridylyl-transferase [Edwardsiella tarda EIB202]
gi|304558135|gb|ADM40799.1| uridylyltransferase [Edwardsiella tarda FL6-60]
Length = 884
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+EL DR GLL+ I IF E LS+ A I+TIG +V+D F + D + P++ +
Sbjct: 811 MELVALDRPGLLAHIGEIFAEMGLSLHGARITTIGERVEDLFILADGERRALTPEMQREL 870
Query: 325 RRQIGHTKLQVKRS 338
+++ T L +
Sbjct: 871 AQRLTETLLSADKG 884
>gi|255556900|ref|XP_002519483.1| amino acid binding protein, putative [Ricinus communis]
gi|223541346|gb|EEF42897.1| amino acid binding protein, putative [Ricinus communis]
Length = 409
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 25/149 (16%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 230
E D +VIT+ D+ L D+ + + G +T Y F++
Sbjct: 17 ESDLSVITVNCPDKTGLGCDLCRIILFFGLSIVRGDFSTDGKWCYIVFWVAGNSSTRWGL 76
Query: 231 ---RHVDGLPISSEAE-----RERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRI 282
R + P S A R+ ++Q R + L+LC DR GLL ++T +
Sbjct: 77 LKKRLLGVCPSCSSASGIPYYRDELLQ------PPRPPDVFLLKLCCHDRRGLLHNVTEV 130
Query: 283 FRENSLSIKRAEISTI-GGKVKDTFYVTD 310
E L+I++ ++ST G+V D F+VTD
Sbjct: 131 LCELELTIRKVKVSTTPDGRVMDLFFVTD 159
>gi|388516485|gb|AFK46304.1| unknown [Medicago truncatula]
Length = 293
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
+ T +E T DR G + L DL NVV A ++ + +T TG ++DP
Sbjct: 98 DATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDP 157
Query: 108 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 166
+ L I+ + N L Y ++ ++ G++ + ++
Sbjct: 158 ELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPKEQV-------------------- 197
Query: 167 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
D + + + D ++ + + DRP LL D+V ++TD+ V G +T A
Sbjct: 198 -DVDIATHINISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKA 256
Query: 227 EFYIRH 232
+F++ +
Sbjct: 257 KFHVSY 262
>gi|402548595|ref|ZP_10845448.1| uridylyltransferase [SAR86 cluster bacterium SAR86C]
Length = 143
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 253 AAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT 312
+ IE + + L + T D GLL+ I ++ +N SI A I+T+G +V+DTF + DVT
Sbjct: 64 SNIEDKNQKKNLLTIETSDGPGLLAKIAKVLHDNGTSIYSARINTLGDRVEDTFEIEDVT 123
Query: 313 GNPVDPKIIDSI 324
+ V K I I
Sbjct: 124 LSSVSKKKIQKI 135
>gi|145300063|ref|YP_001142904.1| protein-P-II uridylyltransferase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|418357895|ref|ZP_12960584.1| protein-P-II uridylyltransferase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
gi|142852835|gb|ABO91156.1| protein-P-II uridylyltransferase [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356688807|gb|EHI53356.1| protein-P-II uridylyltransferase [Aeromonas salmonicida subsp.
salmonicida 01-B526]
Length = 898
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
LEL D GLL+ I +F++ LS+ A+I+TIG +V+D F +T + G P++
Sbjct: 806 LELTALDTPGLLARIGAVFQQCGLSLHAAKITTIGERVEDFFSLTTLAGEPLN 858
>gi|357467939|ref|XP_003604254.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
gi|355505309|gb|AES86451.1| hypothetical protein MTR_4g007140 [Medicago truncatula]
Length = 293
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 77/186 (41%), Gaps = 22/186 (11%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
+ T +E T DR G + L DL NVV A ++ + +T TG ++DP
Sbjct: 98 DATVVEITFGDRLGALLDTMRALKDLGLNVVKANVFLDSSGKHNKFSITKADTGRKVEDP 157
Query: 108 KRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGRV 166
+ L I+ + N L Y ++ ++ G++ + ++
Sbjct: 158 ELLEAIRLTIINNLIQYHPESSSQLAMGAAFGLLPPKEQV-------------------- 197
Query: 167 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
D + + + D ++ + + DRP LL D+V ++TD+ V G +T A
Sbjct: 198 -DVDIATHINISDDGPDRSLFYVETADRPGLLVDLVKSITDIDIAVESGEFDTEGLLAKA 256
Query: 227 EFYIRH 232
+F++ +
Sbjct: 257 KFHVSY 262
>gi|357454137|ref|XP_003597349.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
gi|355486397|gb|AES67600.1| hypothetical protein MTR_2g096640 [Medicago truncatula]
Length = 421
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)
Query: 174 QVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY-IRH 232
Q+ + N D +IT+ D+ L DI + + G V+T Y + I
Sbjct: 12 QIQLGNKPGDPFIITVNCPDKTGLACDICRFILHFGLCILKGDVSTDGVWCYIVLWVIPQ 71
Query: 233 VDGLP-ISSEAERERVIQCLEAAIER--------RASEGLELELCTEDRVGLLSDITRIF 283
LP +S ++R+ + +S L+ C DR GLL D+T++
Sbjct: 72 SILLPRMSYSYLKDRLQAICPPCVASFYLVQKPTTSSPVYLLKFCCLDRKGLLHDVTKVL 131
Query: 284 RENSLSIKRAEISTI-GGKVKDTFYVTD 310
E L+I+R +++T GKV D F+VTD
Sbjct: 132 CELELTIQRVKVTTTPDGKVLDLFFVTD 159
>gi|302833812|ref|XP_002948469.1| hypothetical protein VOLCADRAFT_45231 [Volvox carteri f.
nagariensis]
gi|300266156|gb|EFJ50344.1| hypothetical protein VOLCADRAFT_45231 [Volvox carteri f.
nagariensis]
Length = 199
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 71/179 (39%), Gaps = 46/179 (25%)
Query: 173 PQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P V + NI + TV+T+ ++ L D + L ++ + VNTG T FYI
Sbjct: 3 PTVKIDNIRDPFATVLTVEYGEKTGELLDAITALKNLGLNIRRAKVNTGGTT----FYIT 58
Query: 232 HVD-----------------------------GLPISSEAE------------RERVIQC 250
D G +S A+ R +V+Q
Sbjct: 59 DADTSEKIVKSARLEDIRMTVLNSLVAKFPEVGEALSVGAKSNDLDGNKVLGTRRKVVQT 118
Query: 251 LEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
+E L++ T DR GLL DI R+ ++ +L++ AEI T G KD F++T
Sbjct: 119 TIDIVEASNGSCSVLKIVTSDRPGLLVDIVRVLKDINLNVVSAEIDTEGTLAKDEFFIT 177
>gi|449439743|ref|XP_004137645.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Cucumis sativus]
Length = 292
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/187 (21%), Positives = 78/187 (41%), Gaps = 22/187 (11%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
++ T +E T DR G + L +L NVV A ++ + +T TG + D
Sbjct: 96 QDATVVEITFGDRLGALLDTMNALKNLGLNVVKANVFLDSSGKHNRFSITKADTGRKVDD 155
Query: 107 PKRLSTIKELLFNVLRGYDDFRKAKTSLSPP-GIMNRERRLHQIMFDDRDYERVEKAVGR 165
P+ L I+ + N L Y A+ ++ G++ ++++
Sbjct: 156 PELLEAIRLTIINNLIQYHPESSAQLAMGAAFGVVPPKQQV------------------- 196
Query: 166 VEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
D + V + D +++ + + DRP LL D+V +TD+ V G +T A
Sbjct: 197 --DVDIATHINVQDDGPDRSLLYVETADRPGLLVDLVKIITDINVAVESGEFDTEGLLAK 254
Query: 226 QEFYIRH 232
+F++ +
Sbjct: 255 AKFHVSY 261
>gi|356550663|ref|XP_003543704.1| PREDICTED: unknown protein DS12 from 2D-PAGE of leaf,
chloroplastic-like [Glycine max]
Length = 290
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 79/194 (40%), Gaps = 34/194 (17%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
+ T +E T DR G + L +L NVV A ++ + +T +G ++DP
Sbjct: 95 DATVVEITFGDRLGALLDTMNALRNLGLNVVKANVFLDSSGKHNKFSITKADSGRKVEDP 154
Query: 108 KRLSTIKELLFNVLRGYDDFRKAKTSL-------SPPGIMNRERRLHQIMFDDRDYERVE 160
+ L I+ + N + Y A+ +L +P ++ E H + DD
Sbjct: 155 ELLEAIRLTILNNMIQYHPESSAQLALGAAFGLVTPKEQVDVEIATHITISDD------- 207
Query: 161 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
P+ ++L +E + DRP LL D+V +TD+ V G +T
Sbjct: 208 -----------GPKRSLLYVE---------TADRPGLLVDLVKIITDINIAVESGEFDTE 247
Query: 221 RTEAYQEFYIRHVD 234
A +F++ + D
Sbjct: 248 GLLAKAKFHVNYKD 261
>gi|403057411|ref|YP_006645628.1| protein-P-II uridylyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804737|gb|AFR02375.1| protein-P-II uridylyltransferase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 930
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 31/166 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 243
T I + S DRP L + L V + T R A F + DG P++ +
Sbjct: 745 TEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLAQD-R 803
Query: 244 RERVIQCLEAAIE---------RRASEGLE--------------------LELCTEDRVG 274
E + LE A+ RR S L +EL D+ G
Sbjct: 804 HEMIRHALEQALTHRSYQHPRVRRPSPKLRHFSVPTEVNFLPTHTDRRSYMELSALDQPG 863
Query: 275 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
LL+ I IF + +LS+ A ISTIG +V+D F + D + P +
Sbjct: 864 LLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRRALKPDL 909
Score = 37.7 bits (86), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 1 MDVFNVIDCDGKKIRD--KEVIDYIQQRLETDASF--------APSLR-----SSVGVMP 45
MD F V++ DG + E+I + ++ T S+ +P LR + V +P
Sbjct: 786 MDTFIVLEPDGSPLAQDRHEMIRHALEQALTHRSYQHPRVRRPSPKLRHFSVPTEVNFLP 845
Query: 46 T--EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYA 103
T + + +E + D+PGL + + + ADL+ ++ A I T +R + + D S A
Sbjct: 846 THTDRRSYMELSALDQPGLLARIGEIFADLNLSLHGARISTIGERVEDLFILAD-SDRRA 904
Query: 104 IKDPKRLSTIKEL 116
+K RL + L
Sbjct: 905 LKPDLRLKLQERL 917
>gi|350553297|ref|ZP_08922477.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodospira sibirica ATCC
700588]
gi|349791172|gb|EGZ45062.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodospira sibirica ATCC
700588]
Length = 898
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK----- 319
L + T DR GLLS I + + + A+I+T G +V D FY+TD+ G P+ K
Sbjct: 827 LNITTVDRPGLLSCIGIALTQCGVKVYNAKIATAGEQVDDVFYITDLEGRPITDKKQKSM 886
Query: 320 IIDSIRRQIG 329
I ++R+ +G
Sbjct: 887 ITHTLRKSLG 896
>gi|238759952|ref|ZP_04621106.1| [Protein-PII] uridylyltransferase [Yersinia aldovae ATCC 35236]
gi|238701859|gb|EEP94422.1| [Protein-PII] uridylyltransferase [Yersinia aldovae ATCC 35236]
Length = 764
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + S DRP L +V L V + T R
Sbjct: 562 LEHDSTQPLVLVSRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 621
Query: 224 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIE---------RRASEGLE--------- 264
A F + DG P++ + R +I Q L+ A+ RR S L
Sbjct: 622 AMDTFIVLEPDGSPLAQD--RHPIIRQALQQAMTQPNYQPPRVRRLSPKLRHFSVPTEAN 679
Query: 265 -----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 680 FLPTHNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 736
>gi|227326535|ref|ZP_03830559.1| PII uridylyl-transferase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 904
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 31/166 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 243
T I + S DRP L + L V + T R A F + DG P++ +
Sbjct: 719 TEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLAQD-R 777
Query: 244 RERVIQCLEAAIE---------RRASEGLE--------------------LELCTEDRVG 274
E + LE A+ RR S L +EL D+ G
Sbjct: 778 HEMIRHALEQALTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTDRRSYMELSALDQPG 837
Query: 275 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
LL+ I IF + +LS+ A ISTIG +V+D F + D + P +
Sbjct: 838 LLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRRALKPDL 883
>gi|383188836|ref|YP_005198964.1| (protein-PII) uridylyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
gi|371587094|gb|AEX50824.1| (protein-PII) uridylyltransferase [Rahnella aquatilis CIP 78.65 =
ATCC 33071]
Length = 896
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 79/192 (41%), Gaps = 29/192 (15%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + S DRP L + L + + T R
Sbjct: 695 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPYLFATVAGELDRRNLSIHDAQIFTNRDGM 754
Query: 224 AYQEFYIRHVDGLPISS---EAERERVIQCLEAAIE----RRASEGLE------------ 264
A F + DG P++ EA R + Q + A + RR S L
Sbjct: 755 AMDTFIVLEPDGSPLAQDRHEAIRYALEQSMTQAYQPPRARRPSPKLRHFSVQTEVSFLP 814
Query: 265 --------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+EL D+ GLL+ I +F + LS+ A ISTIG +V+D F + + +
Sbjct: 815 THTDRRTYMELVALDQPGLLARIGEVFSDLGLSLHGARISTIGERVEDLFILANGERRAL 874
Query: 317 DPKIIDSIRRQI 328
D + I R++
Sbjct: 875 DKQTRQEITRRL 886
>gi|350561740|ref|ZP_08930578.1| UTP-GlnB uridylyltransferase, GlnD [Thioalkalivibrio
thiocyanoxidans ARh 4]
gi|349780772|gb|EGZ35090.1| UTP-GlnB uridylyltransferase, GlnD [Thioalkalivibrio
thiocyanoxidans ARh 4]
Length = 886
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 328
DR GLLS I +F E +++++ A IST G +V+D F + + G + P+ ++RRQ+
Sbjct: 825 DRPGLLSTIGCVFAEQNVNVRTARISTAGEQVEDIFLLFNADGRELTPEQQHALRRQL 882
>gi|227114685|ref|ZP_03828341.1| PII uridylyl-transferase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 937
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 66/166 (39%), Gaps = 31/166 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 243
T I + S DRP L + L V + T R A F + DG P++ +
Sbjct: 752 TEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLAQD-R 810
Query: 244 RERVIQCLEAAIE---------RRASEGLE--------------------LELCTEDRVG 274
E + LE A+ RR S L +EL D+ G
Sbjct: 811 HEMIRHALEQALTHRHYQHPRVRRPSPKLRHFSVPTEVNFLPTHTDRRSYMELSALDQPG 870
Query: 275 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
LL+ I IF + +LS+ A ISTIG +V+D F + D + P +
Sbjct: 871 LLARIGEIFADLNLSLHGARISTIGERVEDLFILADSDRRALKPDL 916
>gi|285018784|ref|YP_003376495.1| protein-pII uridylyltransferase [Xanthomonas albilineans GPE PC73]
gi|283474002|emb|CBA16503.1| probable protein-pII uridylyltransferase [Xanthomonas albilineans
GPE PC73]
Length = 876
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
L L DR GLL+D+ + R L + A I+T G +V+D F++TD P +
Sbjct: 799 LSLIAPDRPGLLADVALVLRYQRLRVHDARIATFGERVEDMFHITDEYNLP-----LTEA 853
Query: 325 RRQIGHTKLQVKRSTILAP-KPPKET 349
RQ H LQ L P PP E
Sbjct: 854 SRQALHAALQ----ACLDPDTPPGEV 875
>gi|416068436|ref|ZP_11582796.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|348001080|gb|EGY41840.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
Length = 863
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY--QEFYIRHVDG--LPI-- 238
T I + +KDRP L +V T+ + + + T + + Y F + +DG LP
Sbjct: 687 TEIFIYTKDRPNLFHKVVSTIGAKKLSIHDAQIITAK-DGYVLDSFIVTELDGSVLPFDR 745
Query: 239 -------------SSEAERERVIQCLEAA----------IERRASEGLELELCTEDRVGL 275
S ++R+ + + A + ++ E+EL + D+ GL
Sbjct: 746 RRMLEAALMESLNSDAVNKQRLRENHQLAHFHVKTEVRFLNLEKTDQTEMELFSLDQAGL 805
Query: 276 LSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQV 335
L+D++ +F E L++ A+I+TIG K +D F +T N VD + + R ++ + +Q+
Sbjct: 806 LADVSAVFCELELNLLNAKITTIGEKAEDFFILT----NKVDKALNEGERARLLNRLVQI 861
>gi|416057586|ref|ZP_11580270.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|348000632|gb|EGY41408.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 863
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY--QEFYIRHVDG--LPI-- 238
T I + +KDRP L +V T+ + + + T + + Y F + +DG LP
Sbjct: 687 TEIFIYTKDRPNLFHKVVSTIGAKKLSIHDAQIITAK-DGYVLDSFIVTELDGSVLPFDR 745
Query: 239 -------------SSEAERERVIQCLEAA----------IERRASEGLELELCTEDRVGL 275
S ++R+ + + A + ++ E+EL + D+ GL
Sbjct: 746 RRMLEAALMESLNSDAVNKQRLRENHQLAHFHVKTEVRFLNLEKTDQTEMELFSLDQAGL 805
Query: 276 LSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQV 335
L+D++ +F E L++ A+I+TIG K +D F +T N VD + + R ++ + +Q+
Sbjct: 806 LADVSAVFCELELNLLNAKITTIGEKAEDFFILT----NKVDKALNEGERARLLNRLVQI 861
>gi|424512908|emb|CCO66492.1| predicted protein [Bathycoccus prasinos]
Length = 250
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 57 TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKEL 116
TDRPGL SE+ VL DL+ NVV AEI T A + T H G A+ D +++L
Sbjct: 180 TDRPGLLSEIVRVLKDLNLNVVQAEIDTIGAAAVDTMLCTYH--GKALND-----NMEQL 232
Query: 117 LFNVLRGY 124
+ N L+ Y
Sbjct: 233 VVNTLQYY 240
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
T DR GLLS+I R+ ++ +L++ +AEI TIG DT T
Sbjct: 179 TTDRPGLLSEIVRVLKDLNLNVVQAEIDTIGAAAVDTMLCT 219
>gi|384253079|gb|EIE26554.1| starch phosphorylase [Coccomyxa subellipsoidea C-169]
Length = 963
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 328
+R GLL+ I+ FR+ L + +AE+ G+V D F++T + G V DPK ID +R +
Sbjct: 43 NRPGLLTSISGTFRDLGLDVGKAEVDGSNGRVLDKFFITALGGGKVTDPKDIDKLRASL 101
>gi|322831586|ref|YP_004211613.1| UTP-GlnB uridylyltransferase, GlnD [Rahnella sp. Y9602]
gi|384256700|ref|YP_005400634.1| PII uridylyl-transferase [Rahnella aquatilis HX2]
gi|321166787|gb|ADW72486.1| UTP-GlnB uridylyltransferase, GlnD [Rahnella sp. Y9602]
gi|380752676|gb|AFE57067.1| PII uridylyl-transferase [Rahnella aquatilis HX2]
Length = 896
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 80/192 (41%), Gaps = 29/192 (15%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + S DRP L + L + + T R
Sbjct: 695 LEHDSTKPLVLVSRQATRGGTEIFIWSPDRPYLFATVAGELDRRNLSIHDAQIFTNRDGM 754
Query: 224 AYQEFYIRHVDGLPISS---EAERERVIQCLEAAIE----RRASEGLE------------ 264
A F + DG P++ EA R + Q + A + RR S L
Sbjct: 755 AMDTFIVLEPDGSPLAQDRHEAIRYALEQSMTQAYQPPRARRPSPKLRHFSVQTEVSFLP 814
Query: 265 --------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+EL + D+ GLL+ + +F + LS+ A ISTIG +V+D F + + +
Sbjct: 815 THTDRRTYMELVSLDQPGLLARVGEVFSDLGLSLHGARISTIGERVEDLFILANGERRAL 874
Query: 317 DPKIIDSIRRQI 328
D + I R++
Sbjct: 875 DKQTRQEITRRL 886
>gi|397690541|ref|YP_006527795.1| UTP-GlnB uridylyltransferase, GlnD [Melioribacter roseus P3M]
gi|395812033|gb|AFN74782.1| UTP-GlnB uridylyltransferase, GlnD [Melioribacter roseus P3M]
Length = 852
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 35/225 (15%)
Query: 38 RSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVT 96
++SV +TSI D L S +C L+ N+ +A+I+T D +VT
Sbjct: 654 KASVFFKEEAGYTSITVITRDSEALLSRLCGALSINDLNIHDAKIFTRKDGIVIDNFNVT 713
Query: 97 DHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDY 156
D T + D R IK L +L ++ + K ++
Sbjct: 714 DFRTNEVV-DKSRYDKIKSDL--ILAALNELQITK-----------------------EF 747
Query: 157 ERVEKAVGRVEDK--SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVF 213
R++ R+E+K + +V ++ + D YT+I + S DR LL+ I + ++ ++
Sbjct: 748 NRIKSKWWRIENKLFKRKGKVKIVFEKHDRYTIIDVFSPDRLGLLYQITRKMNELGLSIY 807
Query: 214 HGMVNTGRTEAYQEFYI--RHVDGLPISSEAERERVIQCLEAAIE 256
+NT + FYI RH + S E E +IQ L IE
Sbjct: 808 FAKINTKADDIVDSFYILDRHKRKV---SANEYELIIQQLTETIE 849
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+++ + DR+GLL ITR E LSI A+I+T + D+FY+ D V + I
Sbjct: 781 IDVFSPDRLGLLYQITRKMNELGLSIYFAKINTKADDIVDSFYILDRHKRKVSANEYELI 840
Query: 325 RRQIGHT 331
+Q+ T
Sbjct: 841 IQQLTET 847
>gi|419955546|ref|ZP_14471672.1| PII uridylyl-transferase, partial [Pseudomonas stutzeri TS44]
gi|387967587|gb|EIK51886.1| PII uridylyl-transferase, partial [Pseudomonas stutzeri TS44]
Length = 114
Score = 45.8 bits (107), Expect = 0.030, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKI 320
+E+ DR GLL+ + ++F LS++ A+I+T+G +V+D F+VT+ P+ DP++
Sbjct: 31 IEIIAPDRPGLLARVGQLFLAFDLSVQNAKIATLGERVEDVFFVTNADNQPLSDPQL 87
>gi|326503882|dbj|BAK02727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 425
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD 310
L+ C DR+GLL D+T + E L+I+R ++ST G+V D F++TD
Sbjct: 122 LKFCCYDRIGLLHDVTCVLCEMELTIRRVKVSTTPDGRVMDLFFITD 168
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 16/134 (11%)
Query: 1 MDVFNVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEE---HTSIEFTGT 57
+D+F V DGKKI D++ + RL T+ P + V P E +E +G
Sbjct: 299 VDLFAV-QSDGKKILDQQKQRTMCSRLRTEL-LRPLHVALVNRGPDAELLVANPVEVSGK 356
Query: 58 DRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAV--VHVT--DHSTGYAIKDPKRLS 111
RP +F ++ L +LH V AEI H NDR V VH+ DH +++ S
Sbjct: 357 GRPLVFYDITLALKNLHRRVFLAEIGRHMVNDREWEVYRVHLGEDDHELSCSVR-----S 411
Query: 112 TIKELLFNVLRGYD 125
I + + N+L G+D
Sbjct: 412 KIVDSVTNMLMGWD 425
>gi|347734806|ref|ZP_08867795.1| PII uridylyltransferase [Azospirillum amazonense Y2]
gi|346922124|gb|EGY02613.1| PII uridylyltransferase [Azospirillum amazonense Y2]
Length = 950
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 173 PQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V V N YTVI + +DRP LL+D+ LT + + ++T A FY++
Sbjct: 842 PRVLVDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYVK 901
Query: 232 HVDGLPISSEAERERVIQCLEAAIE 256
+ GL ++ EA+ ++ + L A ++
Sbjct: 902 DIFGLKVAHEAKLTQIRKELLAVLD 926
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 255 IERRASEGLE-LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
++ +AS G +E+ DR GLL D+TR +L I A+IST G D FYV D+ G
Sbjct: 846 VDNKASAGYTVIEVNGRDRPGLLYDLTRALTALNLQIASAKISTYGNAAVDVFYVKDIFG 905
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 19/117 (16%)
Query: 23 IQQRLETDASFAPSLRSSVGVMPTEE------------------HTSIEFTGTDRPGLFS 64
+++ L D AP L +P+ +T IE G DRPGL
Sbjct: 810 VEKALAGDIKLAPELAKRASPLPSRTRVFRVPPRVLVDNKASAGYTVIEVNGRDRPGLLY 869
Query: 65 EVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
++ L L+ + +A+I T+ + A V +V D G + +L+ I++ L VL
Sbjct: 870 DLTRALTALNLQIASAKISTYGNAAVDVFYVKD-IFGLKVAHEAKLTQIRKELLAVL 925
>gi|374262858|ref|ZP_09621418.1| hypothetical protein LDG_7851 [Legionella drancourtii LLAP12]
gi|363536674|gb|EHL30108.1| hypothetical protein LDG_7851 [Legionella drancourtii LLAP12]
Length = 857
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 234 DGLPISSEAERERVIQCLEAAIERRASEGL-----ELELCTEDRVGLLSDITRIFRENSL 288
D LP+ S+ R R++ + + + L L L T DR GLL+ I+R+F ++
Sbjct: 753 DQLPVVSQKRRSRLLAHFKVKTQINYHDDLLNNHTRLFLITGDRPGLLATISRVFLIFNI 812
Query: 289 SIKRAEISTIGGKVKDTFYVTD 310
+ A+I T G + +D FY+T+
Sbjct: 813 HLHNAKIVTAGERAEDMFYITN 834
>gi|117618353|ref|YP_855712.1| protein-P-II uridylyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559760|gb|ABK36708.1| protein-P-II uridylyltransferase [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 884
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
LEL D GLL+ I +F++ LS+ A+I+TIG +V+D F +T + G P+
Sbjct: 803 LELTALDTPGLLARIGAVFQQCGLSLHAAKITTIGERVEDFFSLTTLAGEPL 854
>gi|163797114|ref|ZP_02191069.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
gi|159177630|gb|EDP62183.1| UTP:GlnB (protein PII) uridylyltransferase [alpha proteobacterium
BAL199]
Length = 945
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 90/218 (41%), Gaps = 33/218 (15%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + TD PGLFS + +A NVV+A I+T ++ A + A P R
Sbjct: 754 TEVTVYATDHPGLFSRISGAMAATGANVVDARIFTLSNGMALDTFLIQDEDRLAFDRPDR 813
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLH---QIMFDDRDYERVEKAVGRV 166
++ + + L G KA + P + R R L +++ D+
Sbjct: 814 IAKLVSAIERALSGALRVDKALEA-RKPTLGGRTRALKIPPRVLIDN------------- 859
Query: 167 EDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQ 226
+ VT +TV+ + +D P +L+ + L + + ++T
Sbjct: 860 -----KASVT-------HTVVEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVD 907
Query: 227 EFYIRHVDGLPISSEAE----RERVIQCLEAAIERRAS 260
FY++ V GL + S+++ R +++ L AA ++A+
Sbjct: 908 VFYLKDVFGLKVDSKSKLEDIRRALMKALGAAEAKKAA 945
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI-IDS 323
+E+ D G+L +TR + I A IST G + D FY+ DV G VD K ++
Sbjct: 868 VEVNGRDEPGVLWRMTRALAGVGVQIHSASISTYGERFVDVFYLKDVFGLKVDSKSKLED 927
Query: 324 IRRQI 328
IRR +
Sbjct: 928 IRRAL 932
>gi|387120171|ref|YP_006286054.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415755713|ref|ZP_11480886.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|348655977|gb|EGY71396.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385874663|gb|AFI86222.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 863
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY--QEFYIRHVDG--LPI-- 238
T I + +KDRP L +V T+ + + + T + + Y F + +DG LP
Sbjct: 687 TEIFIYTKDRPNLFHKVVSTIGAKKLSIHDAQIITAK-DGYVLDSFIVTELDGSVLPFDR 745
Query: 239 -------------SSEAERERVIQCLEAA----------IERRASEGLELELCTEDRVGL 275
S ++R+ + + A + ++ E+EL + D+ GL
Sbjct: 746 RRMLEAALMESLNSDAVNKQRLRENHQLAHFHVKTEVRFLNLEKTDQTEMELFSLDQAGL 805
Query: 276 LSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQV 335
L+D++ +F E L++ A+I+TIG K +D F +T N VD + + R ++ + +Q+
Sbjct: 806 LADVSAVFCELELNLLNAKITTIGEKAEDFFILT----NKVDKALNEGERARLLNRLVQI 861
>gi|440730699|ref|ZP_20910771.1| PII uridylyl-transferase [Xanthomonas translucens DAR61454]
gi|440377486|gb|ELQ14133.1| PII uridylyl-transferase [Xanthomonas translucens DAR61454]
Length = 879
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
L L DR GLLS++ ++ R L + A I+T G + +D F +TD P + DS
Sbjct: 802 LNLVAPDRPGLLSNVAQVLRRQQLRVHDARIATFGERAEDVFQITDEHNLP----LPDSS 857
Query: 325 RRQIGHTKLQVKRSTILAPK-PPKET 349
R+ + H LQ L P PP E+
Sbjct: 858 RQAL-HAALQ----ACLDPDTPPGES 878
>gi|188533034|ref|YP_001906831.1| PII uridylyl-transferase [Erwinia tasmaniensis Et1/99]
gi|188028076|emb|CAO95933.1| [Protein-PII] uridylyltransferase [Erwinia tasmaniensis Et1/99]
Length = 885
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 73/174 (41%), Gaps = 31/174 (17%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 243
T I + S DRP L + L V + T R A F + DG P++++
Sbjct: 703 TEIFIWSPDRPYLFAAVAGELDKRNLSVHDAQIFTSRDGMAMDTFIVLEPDGSPLATD-R 761
Query: 244 RERVIQCLEAAI---------ERRASEGLE--------------------LELCTEDRVG 274
E LE AI RR S L+ LEL DR G
Sbjct: 762 HEATRHALEQAICQTDWQPPRTRRQSARLKHFNVETSVNFLPTHTDRRTYLELVALDRPG 821
Query: 275 LLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQI 328
LL+ + +F + +S+ A ISTIG +V+D F + D +D ++ + +++++
Sbjct: 822 LLACVGEVFADLGVSLHGARISTIGERVEDLFILADSERRALDTELREVLQQRL 875
>gi|317493191|ref|ZP_07951614.1| protein-P-II uridylyltransferase [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316918851|gb|EFV40187.1| protein-P-II uridylyltransferase [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 889
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 32/176 (18%)
Query: 166 VEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE- 223
++ +S+P V V ++ + T I + S DRP L + L V + T R
Sbjct: 687 LKHDASKPLVLVSHLATRGGTEIFIYSPDRPYLFAAVAGELDRRNLSVHDAQIFTNRDNF 746
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 264
A F + DG P++ + + LE A+ RR S L
Sbjct: 747 AMDTFVVLEPDGSPLAQD-RHATIKHSLEQALTQQHYRHPRTRRPSPKLRHFTVPTEVSF 805
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
+EL D+ GLL+ + +F E LS+ A I+TIG +V+D F + D
Sbjct: 806 LPMHNERRSYMELVALDQPGLLAQVGEVFAEMGLSLHSARITTIGERVEDLFILAD 861
>gi|433678509|ref|ZP_20510360.1| PII uridylyl-transferase [Xanthomonas translucens pv. translucens
DSM 18974]
gi|430816370|emb|CCP40851.1| PII uridylyl-transferase [Xanthomonas translucens pv. translucens
DSM 18974]
Length = 879
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 10/86 (11%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
L L DR GLLS++ ++ R L + A I+T G + +D F +TD P +
Sbjct: 802 LSLVAPDRPGLLSNVAQVLRRQQLRVHDARIATFGERAEDVFQITDEHNLP-----LPDA 856
Query: 325 RRQIGHTKLQVKRSTILAPK-PPKET 349
RQ H LQ L P PP E+
Sbjct: 857 SRQALHAALQ----ACLDPDTPPGES 878
>gi|429732749|ref|ZP_19267338.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans Y4]
gi|429155553|gb|EKX98227.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans Y4]
Length = 863
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY--QEFYIRHVDG--LPI-- 238
T I + +KDRP L +V T+ + + + T + + Y F + +DG LP
Sbjct: 687 TEIFIYTKDRPNLFHKVVSTIGAKKLSIHDAQIITAK-DGYVLDSFIVTELDGSVLPFDR 745
Query: 239 -------------SSEAERERVIQCLEAA----------IERRASEGLELELCTEDRVGL 275
S ++R+ + + A + ++ E+EL + D+ GL
Sbjct: 746 RRMLEAALMESLNSDAVNKQRLRENHQLAHFHVKTEVRFLNLEKTDQTEMELFSLDQAGL 805
Query: 276 LSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQV 335
L+D++ +F E L++ A+I+TIG K +D F +T N VD + + R ++ + +Q+
Sbjct: 806 LADVSAVFCELELNLLNAKITTIGEKAEDFFILT----NKVDKALNEGERARLLNRLVQI 861
>gi|343518734|ref|ZP_08755723.1| ACT domain protein [Haemophilus pittmaniae HK 85]
gi|343393398|gb|EGV05954.1| ACT domain protein [Haemophilus pittmaniae HK 85]
Length = 124
Score = 45.8 bits (107), Expect = 0.034, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 39/59 (66%)
Query: 255 IERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
++ E ELEL D+ GLL+ I++IF + +L+++ A+I+T+G K +D F +T+ G
Sbjct: 46 LKENKPEHTELELVALDKPGLLAQISQIFADLALNLRNAKITTVGEKAEDFFILTNAQG 104
Score = 41.2 bits (95), Expect = 0.81, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
EHT +E D+PGL +++ + ADL N+ NA+I T ++A +T+ + G A+
Sbjct: 52 EHTELELVALDKPGLLAQISQIFADLALNLRNAKITTVGEKAEDFFILTN-AQGQALSAE 110
Query: 108 KRLSTIKELLFNVL 121
+R + ++L+ L
Sbjct: 111 ER-QQLADVLYRAL 123
>gi|300715394|ref|YP_003740197.1| [protein-PII] uridylyltransferase [Erwinia billingiae Eb661]
gi|299061230|emb|CAX58339.1| [Protein-PII] uridylyltransferase [Erwinia billingiae Eb661]
Length = 881
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 692 PQAT-----RGGTEIFIWSPDRPYLFATVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 746
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P++++ E + Q LE +I RR S L+
Sbjct: 747 EPDGSPLAAD-RHEMIRQALEQSISQTSWQSPRPRRQSSRLKHFSVDTEAKFLPTHTDRR 805
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
+EL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + + P++ +
Sbjct: 806 TYMELIALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERRALSPELRE 865
Query: 323 SIRRQI 328
+++++
Sbjct: 866 VLQQRL 871
>gi|162451413|ref|YP_001613780.1| protein-PII uridylyltransferase [Sorangium cellulosum So ce56]
gi|161161995|emb|CAN93300.1| probable protein-PII uridylyltransferase [Sorangium cellulosum So
ce56]
Length = 953
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 254 AIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+I+ RAS +E+ T DR GLL I+ + LSI A+I+T G +V D FYV+D G
Sbjct: 864 SIDDRASHHTVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSDADG 923
Query: 314 NPVDPKIIDSIRRQ 327
KI + R Q
Sbjct: 924 T----KIANGKRTQ 933
Score = 44.7 bits (104), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
HT IE DRPGL + L L ++ A+I T R A V +V+D + G I
Sbjct: 869 ASHHTVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVSD-ADGTKIA 927
Query: 106 DPKRLSTIKELLFNVLRGYD 125
+ KR ++E L VL+G D
Sbjct: 928 NGKRTQEVEERLHAVLQGLD 947
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 172 RPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
R Q+++ + +TVI + ++DRP LLF I L + + +NT T FY+
Sbjct: 860 RTQISIDDRASHHTVIEVLTRDRPGLLFAISDALYQLGLSISVAKINTEGTRVADVFYVS 919
Query: 232 HVDGLPISSEAERERVIQCLEAAIERRASEG 262
DG I++ + V + L A ++ EG
Sbjct: 920 DADGTKIANGKRTQEVEERLHAVLQGLDGEG 950
>gi|83945035|ref|ZP_00957401.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
gi|83851817|gb|EAP89672.1| PII uridylyl-transferase [Oceanicaulis sp. HTCC2633]
Length = 938
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 30 DASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 89
+A+F + ++ + +++ IE TG DRPGL + L+D+ ++ A I + +RA
Sbjct: 824 EAAFTVTPSVNLDLEASDDALVIEATGRDRPGLLHALAKTLSDIGLSLEAARIDGYGERA 883
Query: 90 AAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD---FRKAKTSL-SPPGIMNR 142
+VT++ G+ RL+ IK L NVL G ++ +AK L S P R
Sbjct: 884 VDTFYVTEN--GHKPSGDARLAGIKVHLMNVLAGAEEAVAVHRAKQGLVSTPASAGR 938
>gi|416047554|ref|ZP_11576044.1| LOW QUALITY PROTEIN: protein-P-II uridylyltransferase
[Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
gi|347993953|gb|EGY35276.1| LOW QUALITY PROTEIN: protein-P-II uridylyltransferase
[Aggregatibacter actinomycetemcomitans serotype d str.
I63B]
Length = 706
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY--QEFYIRHVDG--LPI-- 238
T I + +KDRP L +V T+ + + + T + + Y F + +DG LP
Sbjct: 530 TEIFIYTKDRPNLFHKVVSTIGAKKLSIHDAQIITAK-DGYVLDSFIVTELDGSVLPFDR 588
Query: 239 -------------SSEAERERVIQCLEAA----------IERRASEGLELELCTEDRVGL 275
S ++R+ + + A + ++ E+EL + D+ GL
Sbjct: 589 RRMLEAALMESLNSDAVNKQRLRENHQLAHFHVKTEVRFLNLEKTDQTEMELFSLDQAGL 648
Query: 276 LSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGHTKLQV 335
L+D++ +F E L++ A+I+TIG K +D F +T N VD + + R ++ + +Q+
Sbjct: 649 LADVSAVFCELELNLLNAKITTIGEKAEDFFILT----NKVDKALNEGERARLLNRLVQI 704
>gi|424793688|ref|ZP_18219767.1| [Protein-PII] uridylyltransferase [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796451|gb|EKU24955.1| [Protein-PII] uridylyltransferase [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 879
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
L L DR GLLS++ ++ R L + A I+T G + +D F +TD P + DS
Sbjct: 802 LSLVAPDRPGLLSNVAQVLRRQQLRVHDARIATFGERAEDVFQITDEHNLP----LPDSS 857
Query: 325 RRQIGHTKLQVKRSTILAPK-PPKET 349
R+ + H LQ L P PP E+
Sbjct: 858 RQAL-HAALQ----ACLDPDTPPGES 878
>gi|345872800|ref|ZP_08824728.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodococcus drewsii AZ1]
gi|343917991|gb|EGV28764.1| UTP-GlnB uridylyltransferase, GlnD [Thiorhodococcus drewsii AZ1]
Length = 889
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI-IDS 323
+ L T DR GLL+++ +F++ + ++ A+I+T+G +V D F++T P+ + +
Sbjct: 819 MRLTTLDRPGLLAEVGAVFQQCGIRLQNAKIATVGAEVDDVFFITSEDDTPITCETALAC 878
Query: 324 IRRQIGHTKLQV 335
+RR+I H +L+
Sbjct: 879 LRREI-HERLEA 889
>gi|315634450|ref|ZP_07889736.1| protein-P-II uridylyltransferase [Aggregatibacter segnis ATCC
33393]
gi|315476808|gb|EFU67554.1| protein-P-II uridylyltransferase [Aggregatibacter segnis ATCC
33393]
Length = 863
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
E+EL D+ GLL+D++ +F + L++ A+I+TIG K +D F +T+ G +D
Sbjct: 794 EMELFALDQAGLLADVSAVFCDLELNLLNAKITTIGEKAEDFFILTNKFGRALD 847
>gi|238796605|ref|ZP_04640112.1| [Protein-PII] uridylyltransferase [Yersinia mollaretii ATCC 43969]
gi|238719583|gb|EEQ11392.1| [Protein-PII] uridylyltransferase [Yersinia mollaretii ATCC 43969]
Length = 892
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 72/173 (41%), Gaps = 34/173 (19%)
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQE 227
SS+P V V + + T I + S DRP L +V L V + T R A
Sbjct: 694 SSKPLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 228 FYIRHVDGLPISSEAERERVI-QCLEAAIE---------RRASEGLE------------- 264
F + DG P++ + R +I LE A+ RR S L
Sbjct: 754 FVVLEPDGSPLAQD--RHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPT 811
Query: 265 -------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 812 HNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|407716269|ref|YP_006837549.1| UTP-GlnB (Protein PII) uridylyltransferase, GlnD [Cycloclasticus
sp. P1]
gi|407256605|gb|AFT67046.1| UTP-GlnB (Protein PII) uridylyltransferase, GlnD [Cycloclasticus
sp. P1]
Length = 878
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ T+D+ G+LS I + F ++++ A+I+T+G +D FY+TD + D +IID
Sbjct: 802 LEIRTQDQPGVLSTIGQCFSACKVNVRNAKITTLGSTAEDIFYITDSDNKMIEDSEIIDQ 861
Query: 324 IRRQI 328
++ +
Sbjct: 862 LKESL 866
>gi|411010341|ref|ZP_11386670.1| protein-P-II uridylyltransferase [Aeromonas aquariorum AAK1]
gi|423197732|ref|ZP_17184315.1| protein-P-II uridylyltransferase [Aeromonas hydrophila SSU]
gi|404631420|gb|EKB28056.1| protein-P-II uridylyltransferase [Aeromonas hydrophila SSU]
Length = 878
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
LEL D GLL+ I +F++ LS+ A+I+TIG +V+D F +T + G P+
Sbjct: 803 LELTALDTPGLLARIGAVFQQCGLSLHAAKITTIGERVEDFFSLTTLAGEPL 854
>gi|365837051|ref|ZP_09378433.1| protein-P-II uridylyltransferase [Hafnia alvei ATCC 51873]
gi|364562928|gb|EHM40755.1| protein-P-II uridylyltransferase [Hafnia alvei ATCC 51873]
Length = 908
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 72/176 (40%), Gaps = 32/176 (18%)
Query: 166 VEDKSSRPQVTVLNIE-KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE- 223
++ +S+P V V ++ + T I + S DRP L + L V + T R
Sbjct: 706 LKHDASKPLVLVSHLATRGGTEIFIYSPDRPYLFAAVAGELDRRNLSVHDAQIFTNRDNF 765
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 264
A F + DG P++ + + LE A+ RR S L
Sbjct: 766 AMDTFVVLEPDGSPLAQD-RHATIKHSLEQALTQQHYRHPRTRRPSPKLRHFTVPTEVSF 824
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
+EL D+ GLL+ + +F E LS+ A I+TIG +V+D F + D
Sbjct: 825 LPMHNERRSYMELVALDQPGLLAQVGEVFAEMGLSLHSARITTIGERVEDLFILAD 880
>gi|317125421|ref|YP_004099533.1| UTP-GlnB uridylyltransferase, GlnD [Intrasporangium calvum DSM
43043]
gi|315589509|gb|ADU48806.1| UTP-GlnB uridylyltransferase, GlnD [Intrasporangium calvum DSM
43043]
Length = 788
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
+E+ DR GLL DI SL+++ A I+T G+ DTFYVT++ G+
Sbjct: 718 IEVRATDRAGLLQDIGITLARASLAVRSAHIATYAGQTLDTFYVTELGGS 767
>gi|335419074|ref|ZP_08550132.1| (Protein-PII) uridylyltransferase [Salinisphaera shabanensis E1L3A]
gi|334897209|gb|EGM35345.1| (Protein-PII) uridylyltransferase [Salinisphaera shabanensis E1L3A]
Length = 890
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 71/175 (40%), Gaps = 31/175 (17%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFY-IR 231
P V+V I + + + ++DR L L + + +NT + + Y I
Sbjct: 694 PLVSVAEISDQGSTLFVYTRDRNYLFGVATGVLAQLGLSILDARINTTNDDYTLDTYVIC 753
Query: 232 HVDGLPISSEAERERVIQCLEAAIE----------RRAS---------------EGLE-- 264
DG PI R + + AAI RRAS E E
Sbjct: 754 ESDGHPIKDAYRRREIEDTVRAAIANPEVESIDVTRRASRRSRYFNVPTQIYFSETPERA 813
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ T DR GLLS I F + ++ A+I+TIG + +D F++TD P+
Sbjct: 814 CTIMEVVTADRPGLLSLIGDTFYRFGILLETAKIATIGERAEDVFFITDREHTPI 868
>gi|251790747|ref|YP_003005468.1| PII uridylyl-transferase [Dickeya zeae Ech1591]
gi|247539368|gb|ACT07989.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya zeae Ech1591]
Length = 893
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 32/186 (17%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E +S+P V + + + T I + S DRP L + L V + T R
Sbjct: 689 LEHDASKPMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 748
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 264
A F + DG P++ + + + +E A+ RR S L
Sbjct: 749 AMDTFIVLEPDGSPLAPD-RHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVGF 807
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
+EL D+ GLL+ + +F + +LS+ A ISTIG +V+D F + D
Sbjct: 808 LPTHNDRRSYMELVALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILADSERR 867
Query: 315 PVDPKI 320
+ P++
Sbjct: 868 ALSPEL 873
>gi|238792757|ref|ZP_04636388.1| [Protein-PII] uridylyltransferase [Yersinia intermedia ATCC 29909]
gi|238727865|gb|EEQ19388.1| [Protein-PII] uridylyltransferase [Yersinia intermedia ATCC 29909]
Length = 880
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + + T I + S DRP L +V L V + T R
Sbjct: 678 LEHDSTKPLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 737
Query: 224 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIE---------RRASEGLE--------- 264
A F + DG P++ + R +I LE A+ RR S L
Sbjct: 738 AMDTFIVLEPDGSPLAQD--RHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETN 795
Query: 265 -----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 796 FLPTHNERRTYLELIALDQPGLLARVGGIFADLGLSLHSARITTIGERVEDLFVLAD 852
>gi|238918771|ref|YP_002932285.1| protein-P-II uridylyltransferase, putative [Edwardsiella ictaluri
93-146]
gi|238868339|gb|ACR68050.1| protein-P-II uridylyltransferase, putative [Edwardsiella ictaluri
93-146]
Length = 884
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+EL DR GLL+ I IF E LS+ A I+TIG +V+D F + D + P + +
Sbjct: 811 MELVALDRPGLLAHIGEIFAEMGLSLHGARITTIGERVEDLFILADGERRALTPDMQRDL 870
Query: 325 RRQIGHTKLQVKRS 338
+++ T L +
Sbjct: 871 AQRLTETLLSADKG 884
>gi|302793781|ref|XP_002978655.1| hypothetical protein SELMODRAFT_56610 [Selaginella moellendorffii]
gi|302805679|ref|XP_002984590.1| hypothetical protein SELMODRAFT_46532 [Selaginella moellendorffii]
gi|300147572|gb|EFJ14235.1| hypothetical protein SELMODRAFT_46532 [Selaginella moellendorffii]
gi|300153464|gb|EFJ20102.1| hypothetical protein SELMODRAFT_56610 [Selaginella moellendorffii]
Length = 184
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYV 308
L+ LC EDR LLSD+T+ R L +AEI+T+GG+VK+ +
Sbjct: 100 LKASLCCEDRPDLLSDLTKALRTLKLRTLKAEIATLGGRVKNVILI 145
>gi|223702438|gb|ACN21650.1| putative basic helix-loop-helix protein BHLH25 [Lotus japonicus]
Length = 336
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
++ LC EDR LL D+ + + L RAEIST+GG+VK+ ++T
Sbjct: 231 IKASLCCEDRSDLLPDLIKALKALRLRTLRAEISTLGGRVKNVLFIT 277
>gi|429108960|ref|ZP_19170730.1| [Protein-PII] uridylyltransferase [Cronobacter malonaticus 507]
gi|426310117|emb|CCJ96843.1| [Protein-PII] uridylyltransferase [Cronobacter malonaticus 507]
Length = 310
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 38/168 (22%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 121 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 174
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 175 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 233
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F +
Sbjct: 234 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIA 281
>gi|218782918|ref|YP_002434236.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
gi|218764302|gb|ACL06768.1| UTP-GlnB uridylyltransferase, GlnD [Desulfatibacillum alkenivorans
AK-01]
Length = 893
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 49/216 (22%)
Query: 154 RDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVF 213
R YER++ A +E SR + + +T+ +KDRP L I LT +F
Sbjct: 660 RLYERLQGADAVIEAAPSR--------DANLRTVTVCAKDRPGLFSKIAGVLTLNNLNIF 711
Query: 214 HGMVNTGRTEAYQEFYIRHVDGLPISSEAER---ERVIQCLEAAI--ERRASEGLE---- 264
+ T R + + P+ S E+ +RV + L + E S+ LE
Sbjct: 712 DAQIFTWRNHTAMDIFQV---SPPLDSLFEKRTWQRVERDLGKVLSGEMDLSKALEDKPV 768
Query: 265 ----------------------------LELCTEDRVGLLSDITRIFRENSLSIKRAEIS 296
+E+ D++GLL IT L I A+I+
Sbjct: 769 AKSDDNSASALRRERVSVDNDSSGFFTIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIA 828
Query: 297 TIGGKVKDTFYVTDVTGNPVD-PKIIDSIRRQIGHT 331
T +V D FYV D G VD P+ +D+I++ + T
Sbjct: 829 TKADQVVDVFYVRDFDGQKVDSPESVDAIKQTVLET 864
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 108/253 (42%), Gaps = 54/253 (21%)
Query: 17 KEVIDYIQ--QRLE-TDASF--APSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLA 71
KE++D+I+ +RL+ DA APS +++ ++ DRPGLFS++ VL
Sbjct: 653 KEIVDHIRLYERLQGADAVIEAAPSRDANL--------RTVTVCAKDRPGLFSKIAGVLT 704
Query: 72 DLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAK 131
+ N+ +A+I+T + A + F V D + +
Sbjct: 705 LNNLNIFDAQIFTWRNHTAMDI------------------------FQVSPPLDSLFEKR 740
Query: 132 TSLSPPGIMNRERRLHQIMFDDRDYERV--EKAVGRVEDKSS----RPQVTVLNIEKD-Y 184
T ER L +++ + D + +K V + +D S+ R +V+V N +
Sbjct: 741 T------WQRVERDLGKVLSGEMDLSKALEDKPVAKSDDNSASALRRERVSVDNDSSGFF 794
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGL----PISS 240
T++ + + D+ LL+ I L ++ + T + FY+R DG P S
Sbjct: 795 TIVEVIAYDQLGLLYKITDALYRCGLDIWVAKIATKADQVVDVFYVRDFDGQKVDSPESV 854
Query: 241 EAERERVIQCLEA 253
+A ++ V++ L
Sbjct: 855 DAIKQTVLETLHG 867
>gi|389706449|ref|ZP_10186462.1| uridylyltransferase [Acinetobacter sp. HA]
gi|388610584|gb|EIM39701.1| uridylyltransferase [Acinetobacter sp. HA]
Length = 890
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
+E+ T D+ GLL+ + +F L I A+I+T+G + +D F+VT G P++P+
Sbjct: 810 VEIATLDQPGLLAKVGGLFMMRGLDIHSAKIATLGERAEDIFFVTKKDGMPLNPE 864
>gi|344342426|ref|ZP_08773297.1| UTP-GlnB uridylyltransferase, GlnD [Marichromatium purpuratum 984]
gi|343805762|gb|EGV23657.1| UTP-GlnB uridylyltransferase, GlnD [Marichromatium purpuratum 984]
Length = 886
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD-PKIIDS 323
+ L T D GLL+++ +FR+ + ++ A+I+T+G +V D F++TD P+ +
Sbjct: 810 MRLSTLDCPGLLAEVGAVFRDCGVRLQNAKIATVGAEVDDVFFITDTDDTPITCENALAC 869
Query: 324 IRRQI 328
+RR++
Sbjct: 870 LRREV 874
>gi|271499493|ref|YP_003332518.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya dadantii Ech586]
gi|270343048|gb|ACZ75813.1| UTP-GlnB uridylyltransferase, GlnD [Dickeya dadantii Ech586]
Length = 894
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 32/186 (17%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E +S+P V + + + T I + S DRP L + L V + T R
Sbjct: 690 LEHDTSKPMVLISHQASRGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE---------- 264
A F + DG P++ + + + +E A+ RR S L
Sbjct: 750 AMDTFIVLEPDGSPLAPD-RHDMIRHAIEQALTQRDYQHPRVRRPSSRLRHFSVPTEVSF 808
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGN 314
+EL D+ GLL+ + +F + +LS+ A ISTIG +V+D F + D
Sbjct: 809 LPTHTDRRSYMELIALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILADSERR 868
Query: 315 PVDPKI 320
+ P++
Sbjct: 869 ALSPEL 874
>gi|256379926|ref|YP_003103586.1| PII uridylyl-transferase [Actinosynnema mirum DSM 43827]
gi|255924229|gb|ACU39740.1| UTP-GlnB uridylyltransferase, GlnD [Actinosynnema mirum DSM 43827]
Length = 787
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 75/192 (39%), Gaps = 34/192 (17%)
Query: 151 FDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQY 210
D+R E A S RP V +L +++ + DRP LL L
Sbjct: 587 LDERQRELAASAT-----ASGRPDV-LLEASGQVATVSVAAPDRPGLLSRAAGVLALNSL 640
Query: 211 VVFHGMVNTGRTEAYQEF------------------YIRHVDG-LPIS---SEAERERVI 248
V +V + Q F + R VDG LP++ + ER+
Sbjct: 641 EVHAAVVASHEGAGVQVFTVSPRFGSLPDVALLREQFARAVDGSLPLAEKLAAKERDYGG 700
Query: 249 QCLEAAIER------RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKV 302
L+ R ++ + LEL DR+GLL + L ++ A ++T+GG V
Sbjct: 701 PPLDPPPARVLWFDDESTGSVVLELRAADRIGLLHRVADALERCGLDVRWARVATLGGTV 760
Query: 303 KDTFYVTDVTGN 314
D+F +T +G+
Sbjct: 761 VDSFAITSESGD 772
>gi|389842164|ref|YP_006344248.1| PII uridylyl-transferase [Cronobacter sakazakii ES15]
gi|387852640|gb|AFK00738.1| PII uridylyl-transferase [Cronobacter sakazakii ES15]
Length = 892
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 703 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 756
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 757 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 815
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 816 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 875
Query: 322 DSIRRQI 328
+R+++
Sbjct: 876 QEVRQRL 882
>gi|378578214|ref|ZP_09826894.1| uridylyltransferase/uridylyl-removing enzyme [Pantoea stewartii
subsp. stewartii DC283]
gi|377819323|gb|EHU02403.1| uridylyltransferase/uridylyl-removing enzyme [Pantoea stewartii
subsp. stewartii DC283]
Length = 882
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 693 PQAT-----RGGTEIFIWSPDRPHLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 747
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P++ + +IQ LE AI RR + L
Sbjct: 748 EPDGSPLAPD-RHALIIQALEQAITQSDWVPPRTRRQAARLRHFSVDTEVNFLPTHTDRR 806
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 807 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERRALDEEMRQ 866
Query: 323 SIRRQI 328
++++++
Sbjct: 867 TLQQRL 872
>gi|329296138|ref|ZP_08253474.1| PII uridylyl-transferase [Plautia stali symbiont]
Length = 880
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 36/186 (19%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIR 231
PQ T + T I + S DRP L + L V + T R A F +
Sbjct: 691 PQAT-----RGGTEIFIWSPDRPYLFAAVAGELDRRNLSVHDAQIFTSRDGMAMDTFIVL 745
Query: 232 HVDGLPISSEAERERVIQCLEAAIE---------RRASEGLE------------------ 264
DG P++ + +IQ LE AI RR S L+
Sbjct: 746 EPDGSPLAPD-RHPLIIQALEQAITQTQWVPPRTRRPSSRLKHFSVDTEVNFLPTHTDRR 804
Query: 265 --LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIID 322
LEL D+ GLL+ + +F + +S+ A ISTIG +V+D F + + +D ++
Sbjct: 805 SYLELVALDQPGLLARVGEVFADLGVSLHGARISTIGERVEDLFILANSERRALDAEMRS 864
Query: 323 SIRRQI 328
+++++
Sbjct: 865 VLQQRL 870
>gi|156935318|ref|YP_001439234.1| PII uridylyl-transferase [Cronobacter sakazakii ATCC BAA-894]
gi|166226150|sp|A7MGS0.1|GLND_ENTS8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|156533572|gb|ABU78398.1| hypothetical protein ESA_03176 [Cronobacter sakazakii ATCC BAA-894]
Length = 892
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 703 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 756
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 757 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 815
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 816 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 875
Query: 322 DSIRRQI 328
+R+++
Sbjct: 876 QEVRQRL 882
>gi|340782435|ref|YP_004749042.1| protein-PII uridylyltransferase [Acidithiobacillus caldus SM-1]
gi|340556587|gb|AEK58341.1| protein-PII uridylyltransferase [Acidithiobacillus caldus SM-1]
Length = 825
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 82/212 (38%), Gaps = 35/212 (16%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWT-HNDRAAAVVHVTDHSTGYAIKD 106
E + I G D+ GLF E+ A L N++NA I T H+ RA V D S YA
Sbjct: 634 EGSEILIYGPDKAGLFEEITATLDRHSLNILNARIDTSHDGRALDTFVVLDESHSYA--- 690
Query: 107 PKRLSTIKELLFNVLRGYDDFRKAKTSLSP--PGIMNRERRLHQIMFDDRDYERVEKAVG 164
R + +E+L D R P P R R L F D E
Sbjct: 691 --RPAAAQEILRR------DLRAVLHGEVPRKPHFGMRHRDLRHRYFADLPLEIFVDNHT 742
Query: 165 RVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEA 224
ED T++ +R+ DR LL+ + TL + + +F V+T
Sbjct: 743 LAED----------------TLLEIRAPDRLGLLYRVGGTLRTLGFTIFGAKVSTFGESV 786
Query: 225 YQEFYIRHVDGLPISSEAERERVIQCLEAAIE 256
F+IR+ + R+ I L AA++
Sbjct: 787 EDTFFIRNAQNRKL-----RDNEIAALTAALQ 813
>gi|424798074|ref|ZP_18223616.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 696]
gi|423233795|emb|CCK05486.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 696]
Length = 891
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 702 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 755
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 756 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 814
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 815 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 874
Query: 322 DSIRRQI 328
+R+++
Sbjct: 875 QEVRQRL 881
>gi|429120943|ref|ZP_19181598.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 680]
gi|426324573|emb|CCK12335.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 680]
Length = 891
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 702 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 755
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 756 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 814
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 815 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 874
Query: 322 DSIRRQI 328
+R+++
Sbjct: 875 QEVRQRL 881
>gi|345430299|ref|YP_004823420.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
gi|301156363|emb|CBW15834.1| uridylyltransferase [Haemophilus parainfluenzae T3T1]
Length = 861
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
E ELE+ D+ GLL+ I++IF E L+I A+I+T+G K +D F +T+ G +
Sbjct: 790 EHTELEIVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKGTAL 845
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+ +
Sbjct: 789 KEHTELEIVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTN-EKGTALTE 847
Query: 107 PKR 109
+R
Sbjct: 848 EER 850
>gi|417790357|ref|ZP_12437915.1| PII uridylyl-transferase [Cronobacter sakazakii E899]
gi|449309444|ref|YP_007441800.1| PII uridylyl-transferase [Cronobacter sakazakii SP291]
gi|333955559|gb|EGL73304.1| PII uridylyl-transferase [Cronobacter sakazakii E899]
gi|449099477|gb|AGE87511.1| PII uridylyl-transferase [Cronobacter sakazakii SP291]
Length = 891
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 702 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 755
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 756 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 814
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 815 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 874
Query: 322 DSIRRQI 328
+R+++
Sbjct: 875 QEVRQRL 881
>gi|260596587|ref|YP_003209158.1| PII uridylyl-transferase [Cronobacter turicensis z3032]
gi|260215764|emb|CBA28173.1| [Protein-PII] uridylyltransferase [Cronobacter turicensis z3032]
Length = 891
Score = 45.4 bits (106), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 702 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 755
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 756 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVSFLPTHTDR 814
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 815 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 874
Query: 322 DSIRRQI 328
+R+++
Sbjct: 875 QEVRQRL 881
>gi|429086328|ref|ZP_19149060.1| [Protein-PII] uridylyltransferase [Cronobacter universalis NCTC
9529]
gi|426506131|emb|CCK14172.1| [Protein-PII] uridylyltransferase [Cronobacter universalis NCTC
9529]
Length = 882
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 693 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 746
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 747 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 805
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 806 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 865
Query: 322 DSIRRQI 328
+R+++
Sbjct: 866 QEVRQRL 872
>gi|416891935|ref|ZP_11923460.1| PII uridylyl-transferase [Aggregatibacter aphrophilus ATCC 33389]
gi|347815041|gb|EGY31682.1| PII uridylyl-transferase [Aggregatibacter aphrophilus ATCC 33389]
Length = 880
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
E+EL DR GLL+D++ +F E L++ A+I+TIG K +D F +T+
Sbjct: 811 EMELFALDRAGLLADVSAVFCELELNLCNAKITTIGEKAEDFFILTN 857
>gi|429104046|ref|ZP_19166020.1| [Protein-PII] uridylyltransferase [Cronobacter turicensis 564]
gi|426290695|emb|CCJ92133.1| [Protein-PII] uridylyltransferase [Cronobacter turicensis 564]
Length = 891
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 702 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 755
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 756 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 814
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 815 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 874
Query: 322 DSIRRQI 328
+R+++
Sbjct: 875 QEVRQRL 881
>gi|403713835|ref|ZP_10939894.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
gi|403211941|dbj|GAB94577.1| PII uridylyltransferase [Kineosphaera limosa NBRC 100340]
Length = 792
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%)
Query: 259 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 318
A++ LEL DR GLL D+ R + ++S++ A ++T G+ DT Y+T+ G+ + P
Sbjct: 716 AADATVLELRATDRPGLLHDVGRCLAQLTVSVRSAHVATYCGQAVDTVYLTEPDGSQLAP 775
Query: 319 KIIDSIRRQI 328
+ + R +
Sbjct: 776 ARVAQVIRSL 785
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 31/58 (53%)
Query: 260 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+G +E+ DRVGL +D + + LS++RA +ST G D ++V +G D
Sbjct: 615 GDGQLVEVVAPDRVGLFADTAGVLAAHGLSVRRARLSTDDGIAIDHWHVESPSGARAD 672
>gi|399064503|ref|ZP_10747442.1| (protein-PII) uridylyltransferase [Novosphingobium sp. AP12]
gi|398030747|gb|EJL24152.1| (protein-PII) uridylyltransferase [Novosphingobium sp. AP12]
Length = 917
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 66/162 (40%), Gaps = 33/162 (20%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFYIRHVDGLPISSEAE 243
T++T+ + D P L + I + + ++T RT A F I+ G P ++
Sbjct: 726 TLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRTGRAVDNFLIQDPLGRPFMEASQ 785
Query: 244 RERVIQCLEAAIERRA---------------SEGLEL-----------------ELCTED 271
ER+ +E A+ R ++ E+ E+ + D
Sbjct: 786 LERLSTSIENALANRIKILPQLNARPDARPRADAFEVRPRVLFDNKASNRFTVVEVNSRD 845
Query: 272 RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
R LL+ + E+ L + A I+T G + DTFYVTD+ G
Sbjct: 846 RPALLNRLAHALFESKLMVHSAHIATYGERAADTFYVTDLLG 887
>gi|359399328|ref|ZP_09192332.1| uridylyltransferase [Novosphingobium pentaromativorans US6-1]
gi|357599368|gb|EHJ61082.1| uridylyltransferase [Novosphingobium pentaromativorans US6-1]
Length = 918
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 39/179 (21%)
Query: 177 VLNIEKDY------TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFY 229
L+I +Y T++T+ + D P L + I + + ++T RT A F
Sbjct: 713 ALSIHTEYYQAHGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRTGRAVDNFL 772
Query: 230 IRHVDGLPISSEAERERVIQCLEAAIERRA---------------SEGLEL--------- 265
++ G P E++ ER+ +E A+ R ++ E+
Sbjct: 773 VQDPLGRPFMEESQLERLRTSIENALANRIKILPQLVAKPDARPRADAFEVRPRVIFDNK 832
Query: 266 --------ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
E+ DR LL+ + E+ L + A ++T G + DTFYVTD+ G +
Sbjct: 833 ASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTFYVTDLLGEKL 891
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 29/215 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + +D PGLF + + N+++A I H R V + ++DP
Sbjct: 727 TLVTVIASDHPGLFYRIAGGIHLAGGNIIDARI--HTTRTGRAV------DNFLVQDPLG 778
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
++E LR TS+ + NR + L Q++ A R +
Sbjct: 779 RPFMEESQLERLR---------TSIEN-ALANRIKILPQLVAK-------PDARPRADAF 821
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
RP+V N + +TV+ + ++DRP LL + L + + +V+ V T A F
Sbjct: 822 EVRPRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTF 881
Query: 229 YIRHVDGLPISSEAERERVIQ--CLEAAIERRASE 261
Y+ + G +++ + R + ++ L+AA ER E
Sbjct: 882 YVTDLLGEKLTATS-RLKALERRLLDAASERTVEE 915
>gi|111220372|ref|YP_711166.1| PII uridylyl-transferase [Frankia alni ACN14a]
gi|111147904|emb|CAJ59569.1| [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
(Uridylyl removing enzyme) (UTase) [Frankia alni ACN14a]
Length = 800
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 232
PQV + TV+ +R+ DR +LF IV L++++ V +V T + FY++
Sbjct: 683 PQVIFDDGLGSTTVLEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFYVQE 742
Query: 233 VDGLPISSEAERERVIQCLEAAI 255
DG P++ + R + + + AA+
Sbjct: 743 ADGRPVADDTRRREIARAVLAAL 765
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
LE+ DR G+L I R E L + A ++T+G V D FYV + G PV D+
Sbjct: 697 LEVRAPDRAGVLFRIVRALSELRLDVATAIVATLGLDVVDAFYVQEADGRPV---ADDTR 753
Query: 325 RRQIGHTKLQVKRSTILA--PKPPKE 348
RR+I L L P PP E
Sbjct: 754 RREIARAVLAALGVEDLPDQPAPPAE 779
>gi|429114074|ref|ZP_19174992.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 701]
gi|426317203|emb|CCK01105.1| [Protein-PII] uridylyltransferase [Cronobacter sakazakii 701]
Length = 891
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 702 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 755
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 756 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVETEVNFLPTHTDR 814
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A ISTIG +V+D F + ++ +
Sbjct: 815 KSFLELIALDQPGLLARVGQVFADLGISLHGARISTIGERVEDLFIIATADRRGLNNLLQ 874
Query: 322 DSIRRQI 328
+R+++
Sbjct: 875 QEVRQRL 881
>gi|223939705|ref|ZP_03631578.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
gi|223891662|gb|EEF58150.1| UTP-GlnB uridylyltransferase, GlnD [bacterium Ellin514]
Length = 925
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+E+ TEDR+GLL I+ E L+I A+I T G DTFYV ++ G+ + DP
Sbjct: 854 IEVETEDRIGLLYAISEALAELELNISAAKIVTEKGAAIDTFYVNELDGSKILDPGRQSF 913
Query: 324 IRRQI 328
+ R+I
Sbjct: 914 VERKI 918
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 90/203 (44%), Gaps = 38/203 (18%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVV----HVTDHST 100
P +T + DR GLFS + + N++ A+++T +D A+V +VTD T
Sbjct: 732 PDRGYTVAKICTWDRAGLFSNIAGSFSAAGLNILTAQVFTRSD---AIVLDTFYVTDART 788
Query: 101 GYAIKDPKRLSTIKELLFNVLRGYD-DFRK--AKTSLSPPGIMNRE--RRLHQIMFDDRD 155
G A+ + + ++ELL VL G + +FR AK ++ P + E + Q+ FD+
Sbjct: 789 G-ALANREEKEKLEELLNKVLTGDEVNFRALIAKQRVNRPLYQSYEGDQMPTQLHFDN-- 845
Query: 156 YERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 215
E SR T I + ++DR LL+ I L +++ +
Sbjct: 846 -----------ETSESR------------TAIEVETEDRIGLLYAISEALAELELNISAA 882
Query: 216 MVNTGRTEAYQEFYIRHVDGLPI 238
+ T + A FY+ +DG I
Sbjct: 883 KIVTEKGAAIDTFYVNELDGSKI 905
>gi|388510320|gb|AFK43226.1| unknown [Lotus japonicus]
Length = 243
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 267 LCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYV 308
LC E R GLLSDI + L I RAEI+T+GG+VK+ F +
Sbjct: 143 LCCEYRPGLLSDIRQALDALHLMITRAEIATLGGRVKNVFVI 184
>gi|417842180|ref|ZP_12488275.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19501]
gi|341947960|gb|EGT74601.1| Protein-PII uridylyltransferase [Haemophilus haemolyticus M19501]
Length = 863
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 37/56 (66%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
E E+EL D+ GLL+ +++IF E +L++ A+I+T+G K +D F +T+ G +
Sbjct: 791 EHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKAEDFFILTNRFGKAL 846
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRA 89
+EHT +E D+PGL ++V + ++L+ N++NA+I T ++A
Sbjct: 790 KEHTEMELVALDKPGLLAQVSQIFSELNLNLLNAKITTVGEKA 832
>gi|375337255|ref|ZP_09778599.1| protein-P-II uridylyltransferase [Succinivibrionaceae bacterium
WG-1]
Length = 870
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
LE+ T D GLL+ I +F N L I A+I+T G + D F +TD GN + K + +
Sbjct: 799 LEISTLDVPGLLASIATVFMNNDLVIHAAKITTTGERADDYFSITDELGNQLSDKQKEKV 858
Query: 325 RRQIGHT 331
++ + +T
Sbjct: 859 QQDLVNT 865
>gi|90408936|ref|ZP_01217071.1| protein-P-II uridylyltransferase [Psychromonas sp. CNPT3]
gi|90309964|gb|EAS38114.1| protein-P-II uridylyltransferase [Psychromonas sp. CNPT3]
Length = 892
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 32/168 (19%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY--QEFYIRHVDGLPI 238
+KD T I + +D P + +V + + + V+ + + R +AY F + +DG I
Sbjct: 707 QKDATEIFVYHRDAPSIFSSVVTEIDNKRLSVYDAKILSSR-DAYTLSTFSVLELDGKHI 765
Query: 239 SSEAERERVIQCLEAAIERRAS----------------------------EGLELELCTE 270
S + + +R+ + +E A+ A + ++E+
Sbjct: 766 SGD-KIQRLKKAIEVALMNPAKVNCQQKQLIRIKRQFKIEPLITFLPTRRKRTQIEVVAF 824
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDP 318
D G+L++I ++FR+ L + A+I+TIG +V+D F ++ G + P
Sbjct: 825 DAPGILANIGKVFRKLDLMLYTAKITTIGARVEDLFIISTKAGEALTP 872
>gi|283783951|ref|YP_003363816.1| [protein-PII] uridylyltransferase [Citrobacter rodentium ICC168]
gi|282947405|emb|CBG86950.1| [protein-PII] uridylyltransferase [Citrobacter rodentium ICC168]
Length = 890
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 38/168 (22%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG--MVNTGRTEAYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T A F +
Sbjct: 701 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIV 754
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+SS+ E + LE AI +R+ + +
Sbjct: 755 LEPDGSPLSSD-RHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPTHTDR 813
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
LEL D+ GLL+ + +IF + +S+ A I+TIG +V+D F +
Sbjct: 814 KSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIA 861
>gi|410626422|ref|ZP_11337183.1| [protein-PII] uridylyltransferase [Glaciecola mesophila KMM 241]
gi|410153961|dbj|GAC23952.1| [protein-PII] uridylyltransferase [Glaciecola mesophila KMM 241]
Length = 870
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 42/227 (18%)
Query: 43 VMPTEEHTSIEFT-----GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
++ EHT+ T G D+ LF++V +VL +C++ +A+I ND +
Sbjct: 681 LVEANEHTAKSGTELLVYGKDKINLFAQVASVLDSRNCSIHDAQIMKTNDGYVFDSFIVL 740
Query: 98 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 157
+G I RLS++KE + N L+ PG ++ RR R +
Sbjct: 741 EQSGDRIDSASRLSSLKEAVTN-------------QLNKPGEEHQNRRKMS-----RQMK 782
Query: 158 RVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 217
+++ +V SS+P VT++ +E + D P LL + L +M++ + +
Sbjct: 783 QLDVPT-KVRFYSSQPDVTLVELE---------ALDAPGLLAKVGNLLVEMEFSLRMAKI 832
Query: 218 NTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264
T A F I S ++ + + Q E +++R SE L+
Sbjct: 833 ATIGERAEDLFII---------SNSDEKALTQNQEIELKKRLSETLD 870
>gi|334142818|ref|YP_004536026.1| [protein-PII] uridylyltransferase [Novosphingobium sp. PP1Y]
gi|333940850|emb|CCA94208.1| [protein-PII] uridylyltransferase [Novosphingobium sp. PP1Y]
Length = 918
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 39/179 (21%)
Query: 177 VLNIEKDY------TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRT-EAYQEFY 229
L+I +Y T++T+ + D P L + I + + ++T RT A F
Sbjct: 713 ALSIHTEYYQAHGATLVTVIASDHPGLFYRIAGGIHLAGGNIIDARIHTTRTGRAVDNFL 772
Query: 230 IRHVDGLPISSEAERERVIQCLEAAIERRA---------------SEGLEL--------- 265
++ G P E++ ER+ +E A+ R ++ E+
Sbjct: 773 VQDPLGRPFMEESQLERLRTSIENALANRIKILPQLVAKPDARPRADAFEVRPRVIFDNK 832
Query: 266 --------ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
E+ DR LL+ + E+ L + A ++T G + DTFYVTD+ G +
Sbjct: 833 ASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTFYVTDLLGEKL 891
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 29/215 (13%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKR 109
T + +D PGLF + + N+++A I H R V + ++DP
Sbjct: 727 TLVTVIASDHPGLFYRIAGGIHLAGGNIIDARI--HTTRTGRAV------DNFLVQDPLG 778
Query: 110 LSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDK 169
++E LR TS+ + NR + L Q++ A R +
Sbjct: 779 RPFMEESQLERLR---------TSIEN-ALANRIKILPQLVAK-------PDARPRADAF 821
Query: 170 SSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEF 228
RP+V N + +TV+ + ++DRP LL + L + + +V+ V T A F
Sbjct: 822 EVRPRVIFDNKASNRFTVVEVNARDRPALLNRLAHALFESKLMVYSAHVATYGERAADTF 881
Query: 229 YIRHVDGLPISSEAERERVIQ--CLEAAIERRASE 261
Y+ + G +++ + R + ++ L+AA ER E
Sbjct: 882 YVTDLLGEKLTATS-RLKALERRLLDAASERTVEE 915
>gi|421844792|ref|ZP_16277949.1| PII uridylyl-transferase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|411774271|gb|EKS57781.1| PII uridylyl-transferase [Citrobacter freundii ATCC 8090 = MTCC
1658]
gi|455643764|gb|EMF22888.1| PII uridylyl-transferase [Citrobacter freundii GTC 09479]
Length = 890
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 38/168 (22%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG--MVNTGRTEAYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T A F +
Sbjct: 701 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIV 754
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+SS+ E + LE AI +R+ + +
Sbjct: 755 LEPDGSPLSSD-RHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPTHTDR 813
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
LEL D+ GLL+ + +IF + +S+ A I+TIG +V+D F +
Sbjct: 814 KSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIA 861
>gi|237729473|ref|ZP_04559954.1| PII uridylyl-transferase [Citrobacter sp. 30_2]
gi|365103865|ref|ZP_09333526.1| [protein-PII] uridylyltransferase [Citrobacter freundii 4_7_47CFAA]
gi|226909202|gb|EEH95120.1| PII uridylyl-transferase [Citrobacter sp. 30_2]
gi|363644478|gb|EHL83759.1| [protein-PII] uridylyltransferase [Citrobacter freundii 4_7_47CFAA]
Length = 890
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 38/168 (22%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG--MVNTGRTEAYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T A F +
Sbjct: 701 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIV 754
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+SS+ E + LE AI +R+ + +
Sbjct: 755 LEPDGSPLSSD-RHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPTHTDR 813
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
LEL D+ GLL+ + +IF + +S+ A I+TIG +V+D F +
Sbjct: 814 KSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIA 861
>gi|449435254|ref|XP_004135410.1| PREDICTED: transcription factor bHLH30-like, partial [Cucumis
sativus]
gi|449493508|ref|XP_004159323.1| PREDICTED: transcription factor bHLH30-like, partial [Cucumis
sativus]
Length = 361
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 44/77 (57%)
Query: 233 VDGLPISSEAERERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKR 292
VD + + +E+E ++ +I A ++ LC EDR LL D+ + + L+ +
Sbjct: 241 VDEVSVDDASEQEMMMISNNGSISSSAKFVIKASLCCEDRSDLLPDLIKTLKSLRLTTLK 300
Query: 293 AEISTIGGKVKDTFYVT 309
AEI+T+GG++++ +VT
Sbjct: 301 AEITTLGGRLRNVLFVT 317
>gi|343492904|ref|ZP_08731251.1| PII uridylyl-transferase [Vibrio nigripulchritudo ATCC 27043]
gi|342826699|gb|EGU61113.1| PII uridylyl-transferase [Vibrio nigripulchritudo ATCC 27043]
Length = 873
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 1 MDVFNVIDCDGKKI---RDKEVIDYIQQRLETDASFAP-----------SLRSSVGVMPT 46
+D F V+D GK I R V+ +Q L+ +S ++++ V +PT
Sbjct: 733 LDTFMVLDQHGKPIEENRHATVVKQLQSVLDETSSATKVRRTPRQLMHFNVKTKVDFIPT 792
Query: 47 E--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
+ + T +EF D PGL + V A ADL+ N+ A+I T +RA + +T + G
Sbjct: 793 KTKKRTLMEFVALDTPGLLANVGATFADLNINLHAAKITTIGERAEDLFILTSPNGG 849
>gi|429082373|ref|ZP_19145447.1| [Protein-PII] uridylyltransferase [Cronobacter condimenti 1330]
gi|426548926|emb|CCJ71488.1| [Protein-PII] uridylyltransferase [Cronobacter condimenti 1330]
Length = 891
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 702 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 755
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S++ E + LE AI +R + +
Sbjct: 756 LEPDGSPLSAD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVDTEVNFLPTHTDR 814
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A I+TIG +V+D F + ++ +
Sbjct: 815 KSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRGLNNLLQ 874
Query: 322 DSIRRQI 328
+R+++
Sbjct: 875 QEVRQRL 881
>gi|283835229|ref|ZP_06354970.1| protein-P-II uridylyltransferase [Citrobacter youngae ATCC 29220]
gi|291068940|gb|EFE07049.1| protein-P-II uridylyltransferase [Citrobacter youngae ATCC 29220]
Length = 890
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 38/168 (22%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG--MVNTGRTEAYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T A F +
Sbjct: 701 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIV 754
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+SS+ E + LE AI +R+ + +
Sbjct: 755 LEPDGSPLSSD-RHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPTHTDR 813
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
LEL D+ GLL+ + +IF + +S+ A I+TIG +V+D F +
Sbjct: 814 KSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIA 861
>gi|418470937|ref|ZP_13040863.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
gi|371548442|gb|EHN76681.1| protein-P-II uridylyltransferase, partial [Streptomyces
coelicoflavus ZG0656]
Length = 146
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ DR GLL+ ++R+F + L+I+ A +++ G + D+FYV D G
Sbjct: 37 VEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDRKG 85
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 46 TEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIK 105
+E T +E +G DRPGL + + V +D N+ +A + ++ +RA +V D G I
Sbjct: 31 SETATVVEVSGADRPGLLAALSRVFSDEGLNIRSAHVASYGERAVDSFYVVDR-KGRKIT 89
Query: 106 DPKRLSTIKELLFNVL 121
+R++ ++ L VL
Sbjct: 90 SEQRVAELRAALEAVL 105
>gi|420375810|ref|ZP_14875636.1| protein-P-II uridylyltransferase [Shigella flexneri 1235-66]
gi|391309471|gb|EIQ67140.1| protein-P-II uridylyltransferase [Shigella flexneri 1235-66]
Length = 890
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 38/168 (22%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG--MVNTGRTEAYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T A F +
Sbjct: 701 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDTFIV 754
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+SS+ E + LE AI +R+ + +
Sbjct: 755 LEPDGSPLSSD-RHEAIRFGLEQAITQRSWQPPQPRRQPAKLRHFTVDTEVTFLPTHTDR 813
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
LEL D+ GLL+ + +IF + +S+ A I+TIG +V+D F +
Sbjct: 814 KSFLELIALDQPGLLARVGQIFADLGISLHGARITTIGERVEDLFIIA 861
>gi|291448076|ref|ZP_06587466.1| PII uridylyl-transferase [Streptomyces roseosporus NRRL 15998]
gi|291351023|gb|EFE77927.1| PII uridylyl-transferase [Streptomyces roseosporus NRRL 15998]
Length = 819
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 253 AAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT 312
AA RRA+ +E+ +D GLL I +++ ++ A +ST+G D FYVT
Sbjct: 742 AAGSRRATV---IEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVDAFYVTGTD 798
Query: 313 GNPVDPKIIDSIRRQI 328
G P+ P + R++
Sbjct: 799 GEPLTPARASEVAREV 814
>gi|239991076|ref|ZP_04711740.1| PII uridylyl-transferase [Streptomyces roseosporus NRRL 11379]
Length = 814
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 253 AAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVT 312
AA RRA+ +E+ +D GLL I +++ ++ A +ST+G D FYVT
Sbjct: 737 AAGSRRATV---IEVRAQDAPGLLHRIGNALEGSAVRVRSAHVSTLGANAVDAFYVTGTD 793
Query: 313 GNPVDPKIIDSIRRQI 328
G P+ P + R++
Sbjct: 794 GEPLTPARASEVAREV 809
>gi|356572480|ref|XP_003554396.1| PREDICTED: uncharacterized protein LOC100818216 [Glycine max]
Length = 412
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 230
E TVIT+ D+ L D+ + + G V+T Y F++
Sbjct: 17 EGKATVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFWVVGKQRARWSL 76
Query: 231 ---RHVDGLPISSEAERERVIQCLEAAIER-RASEGLELELCTEDRVGLLSDITRIFREN 286
R ++ P S A I + ++ + + L+ C DR GLL D+T + E
Sbjct: 77 LKKRLIEACPSCSSASG---ISYYRSELQPPKPPDVFLLKFCCHDRKGLLHDVTEVLSEL 133
Query: 287 SLSIKRAEISTI-GGKVKDTFYVTD 310
L I + ++ST GKV D F++TD
Sbjct: 134 ELIIHKVKVSTTPDGKVVDLFFITD 158
>gi|238754810|ref|ZP_04616161.1| [Protein-PII] uridylyltransferase [Yersinia ruckeri ATCC 29473]
gi|238706970|gb|EEP99336.1| [Protein-PII] uridylyltransferase [Yersinia ruckeri ATCC 29473]
Length = 892
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 64/157 (40%), Gaps = 33/157 (21%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAE 243
T I + S DRP L +V L V + T R A F + DG P++ +
Sbjct: 710 TEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDTFIVLEPDGSPLAQD-- 767
Query: 244 RERVI-QCLEAAIE---------RRASEGLE--------------------LELCTEDRV 273
R VI LE A+ RR S L LEL D+
Sbjct: 768 RHSVIRHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTEVNFLPTHTERRSYLELIALDQP 827
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 828 GLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|269467938|gb|EEZ79673.1| UTP:GlnB uridylyltransferase [uncultured SUP05 cluster bacterium]
Length = 838
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
++E+ D+ GLLS+I +F + ++SI A I+T+G +V+D F+V+ P+
Sbjct: 770 QVEISVIDKQGLLSNIAYVFYQLNISIINARIATLGERVEDVFFVSSAQNKPL 822
>gi|95929135|ref|ZP_01311879.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
gi|95134633|gb|EAT16288.1| UTP-GlnB uridylyltransferase, GlnD [Desulfuromonas acetoxidans DSM
684]
Length = 892
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNP-VDPKIIDS 323
+++ T DRVGLL I ++ + I ++IST G + DTFYV D+ G+ V P+ +D
Sbjct: 822 VDVTTMDRVGLLYQIANSLKKIGIYIGVSKISTKGDRAGDTFYVQDIFGHKIVQPEKLDE 881
Query: 324 IR 325
+R
Sbjct: 882 LR 883
>gi|145637873|ref|ZP_01793519.1| PII uridylyl-transferase [Haemophilus influenzae PittHH]
gi|145268943|gb|EDK08900.1| PII uridylyl-transferase [Haemophilus influenzae PittHH]
Length = 123
Score = 44.7 bits (104), Expect = 0.067, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 45/73 (61%), Gaps = 4/73 (5%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI 320
E E+EL D+ GLL+ +++IF + +L++ A+I+T+G K +D F +T+ G +D +
Sbjct: 51 EHTEMELVALDKAGLLAQVSQIFTDLNLNLLNAKITTVGEKAEDFFILTNQFGQALDSQQ 110
Query: 321 IDSIR----RQIG 329
+ +R R IG
Sbjct: 111 REILRNVLYRNIG 123
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+ GL ++V + DL+ N++NA+I T ++A +T+ G A+
Sbjct: 50 KEHTEMELVALDKAGLLAQVSQIFTDLNLNLLNAKITTVGEKAEDFFILTNQ-FGQALDS 108
Query: 107 PKRLSTIKELLFNVL 121
+R E+L NVL
Sbjct: 109 QQR-----EILRNVL 118
>gi|392408543|ref|YP_006445150.1| (protein-PII) uridylyltransferase [Desulfomonile tiedjei DSM 6799]
gi|390621679|gb|AFM22886.1| (protein-PII) uridylyltransferase [Desulfomonile tiedjei DSM 6799]
Length = 889
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
Query: 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--DRAAAVVHVTDHSTGYAIKD 106
+++I DR GLF + ++ N+++A WTH+ A A HV D G + D
Sbjct: 689 YSAITLLTRDRRGLFFRIAGTMSANRINILSA--WTHSIGSVAVATFHVNDIPEG-PLND 745
Query: 107 PKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRV 166
P R K DFRK ++ E + +++ R R + G
Sbjct: 746 PARWEGFKS----------DFRK---------VLKGEVDVDELVLARR---RSRRPFGTS 783
Query: 167 EDKSSRPQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAY 225
+V V N D T+I + + DRP LL+DI LT + + + T +A
Sbjct: 784 SVPRFPLKVQVDNAASDRSTIIEVYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAA 843
Query: 226 QEFYIR 231
FY++
Sbjct: 844 DIFYVQ 849
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 35/168 (20%)
Query: 184 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAE 243
Y+ IT+ ++DR L F I T++ + + ++ + A F++ + P++ A
Sbjct: 689 YSAITLLTRDRRGLFFRIAGTMSANRINILSAWTHSIGSVAVATFHVNDIPEGPLNDPAR 748
Query: 244 RE-------RVIQC---------------------------LEAAIERRASE-GLELELC 268
E +V++ L+ ++ AS+ +E+
Sbjct: 749 WEGFKSDFRKVLKGEVDVDELVLARRRSRRPFGTSSVPRFPLKVQVDNAASDRSTIIEVY 808
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR GLL DITR L+I +I+T + D FYV D GN +
Sbjct: 809 AHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFYVQDEFGNKI 856
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Query: 37 LRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 96
L+ V ++ T IE DRPGL ++ L L N+ +I T D+AA + +V
Sbjct: 790 LKVQVDNAASDRSTIIEVYAHDRPGLLYDITRKLTSLGLNISLTKITTEIDQAADIFYVQ 849
Query: 97 DHSTGYAIKDPKRLSTIKELLFNVL 121
D G I D R+ I+ L N L
Sbjct: 850 D-EFGNKIMDFDRMEEIRSSLKNHL 873
>gi|224105273|ref|XP_002333837.1| predicted protein [Populus trichocarpa]
gi|222838705|gb|EEE77070.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 63/147 (42%), Gaps = 18/147 (12%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 230
E D VIT+ D+ L D+ + + G V+T Y F +
Sbjct: 17 EGDPAVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFSVVGKSTTRWGL 76
Query: 231 ---RHVDGLPISSEAERERVIQCLEAAIER-RASEGLELELCTEDRVGLLSDITRIFREN 286
R V P S A I A ++ R + L+L DR GLL D+T + E
Sbjct: 77 LKKRLVGACPSCSSASG---ISYYTAELQPPRPPDVFLLKLACHDRKGLLHDVTGVLCEL 133
Query: 287 SLSIKRAEISTI-GGKVKDTFYVTDVT 312
L+IK+ ++ST G+V D F+VTD +
Sbjct: 134 ELTIKKVKVSTTPDGRVMDLFFVTDTS 160
>gi|238784877|ref|ZP_04628877.1| [Protein-PII] uridylyltransferase [Yersinia bercovieri ATCC 43970]
gi|238714194|gb|EEQ06206.1| [Protein-PII] uridylyltransferase [Yersinia bercovieri ATCC 43970]
Length = 892
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 72/173 (41%), Gaps = 34/173 (19%)
Query: 170 SSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQE 227
S++P V V + + T I + S DRP L +V L V + T R A
Sbjct: 694 STKPLVLVSHQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 228 FYIRHVDGLPISSEAERERVI-QCLEAAIE---------RRASEGLE------------- 264
F + DG P++ + R +I LE A+ RR S L
Sbjct: 754 FVVLEPDGSPLAQD--RHPIISHALEQAMTQPNYQHPRVRRLSPKLRHFSVPTETNFLPT 811
Query: 265 -------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 812 HNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|453052437|gb|EME99919.1| PII uridylyl-transferase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 793
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
LE+ ED GLL I R + ++ A +ST+G V D FYVT V G P+
Sbjct: 727 LEVRAEDAPGLLYRIGRALEGAGVWVRSAHVSTLGASVVDAFYVTGVDGVPL 778
>gi|380513306|ref|ZP_09856713.1| PII uridylyl-transferase [Xanthomonas sacchari NCPPB 4393]
Length = 877
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
L L DR GLL+D+ ++ R + L + A I+T G + +D F++TD P+
Sbjct: 800 LGLVAPDRPGLLADVAQVLRRHHLRVHDARIATFGERAEDLFHITDEHNLPL 851
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
T + DRPGL ++V VL H V +A I T +RA + H+TD
Sbjct: 798 TRLGLVAPDRPGLLADVAQVLRRHHLRVHDARIATFGERAEDLFHITD 845
>gi|379737150|ref|YP_005330656.1| [protein-PII] uridylyltransferase [Blastococcus saxobsidens DD2]
gi|378784957|emb|CCG04628.1| [Protein-PII] uridylyltransferase [Blastococcus saxobsidens DD2]
Length = 789
Score = 44.7 bits (104), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+E+ DR GLL +T L + A I T+GG D FYV + +G+PVD
Sbjct: 709 VEVRAGDRAGLLYRLTAAIAGEGLDVTSARIETLGGDAVDCFYVANPSGSPVD 761
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 88/219 (40%), Gaps = 37/219 (16%)
Query: 40 SVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHS 99
+VG+ + + DRPGL S VLA +V RAA + +
Sbjct: 590 TVGIAEVADGQQVTIGAPDRPGLLSTCAGVLALNQLDV----------RAAKLTVADGYG 639
Query: 100 TG-YAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYER 158
TG +A+ + + E+L + +R + G ++ RL Q + DY
Sbjct: 640 TGVFAVHPRFGRAPVPEILADGVRAALE-----------GTLSLSDRLRQ---READY-- 683
Query: 159 VEKAVGRVEDKSSRPQVTVLNIE---KDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHG 215
R E + + P+++ N E + ++ +R+ DR LL+ + + V
Sbjct: 684 ------REETRGAPPRISWHNHEVSGRATGIVEVRAGDRAGLLYRLTAAIAGEGLDVTSA 737
Query: 216 MVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA 254
+ T +A FY+ + G P+ +RERV L AA
Sbjct: 738 RIETLGGDAVDCFYVANPSGSPVDLR-QRERVDAALVAA 775
>gi|312140441|ref|YP_004007777.1| [protein-pii] uridylyltransferase [Rhodococcus equi 103S]
gi|311889780|emb|CBH49097.1| [protein-PII] uridylyltransferase [Rhodococcus equi 103S]
Length = 845
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+EL EDR+G+LS + R+ N ++ A +ST+G V D F ++ G +
Sbjct: 767 VELRAEDRLGMLSRLARVLERNGADVRWARVSTLGSSVVDAFCISMEGGG------TRAR 820
Query: 325 RRQIGHTKLQVKRSTILAPKPPKE 348
R QI + L S + AP+P KE
Sbjct: 821 REQIENAIL----SVVPAPEPKKE 840
>gi|325675944|ref|ZP_08155627.1| protein-P-II uridylyltransferase [Rhodococcus equi ATCC 33707]
gi|325553182|gb|EGD22861.1| protein-P-II uridylyltransferase [Rhodococcus equi ATCC 33707]
Length = 845
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+EL EDR+G+LS + R+ N ++ A +ST+G V D F ++ G +
Sbjct: 767 VELRAEDRLGMLSRLARVLERNGADVRWARVSTLGSSVVDAFCISMEGGG------TRAR 820
Query: 325 RRQIGHTKLQVKRSTILAPKPPKE 348
R QI + L S + AP+P KE
Sbjct: 821 REQIENAIL----SVVPAPEPKKE 840
>gi|387890474|ref|YP_006320772.1| [protein-PII] uridylyltransferase [Escherichia blattae DSM 4481]
gi|414593662|ref|ZP_11443304.1| protein-PII uridylyltransferase [Escherichia blattae NBRC 105725]
gi|386925307|gb|AFJ48261.1| [protein-PII] uridylyltransferase [Escherichia blattae DSM 4481]
gi|403195270|dbj|GAB80956.1| protein-PII uridylyltransferase [Escherichia blattae NBRC 105725]
Length = 891
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 64/156 (41%), Gaps = 33/156 (21%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHG--MVNTGRTEAYQEFYIRHVDGLPISSEA 242
T I + S DRP LF VC D + + H + T A F + DG P+S +
Sbjct: 709 TEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDGMAMDSFIVLEPDGTPLSGD- 766
Query: 243 ERERVIQCLEAAIERRASEGLE-----------------------------LELCTEDRV 273
E + LE I +R + + LEL D+
Sbjct: 767 RHEAIRHGLEQTINQRTWQPPQPRRQPAKLRHFTVETEVSFLPTHTDRRSYLELTALDQP 826
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
GLL+ + +IF + +S+ A ISTIG +V+D F +
Sbjct: 827 GLLARVGQIFADLGISLHGARISTIGERVEDLFIIA 862
>gi|419801642|ref|ZP_14326857.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|419844393|ref|ZP_14367684.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
gi|385193249|gb|EIF40627.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae HK262]
gi|386417518|gb|EIJ31997.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae
HK2019]
Length = 861
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
E ELE+ D+ GLL+ I++IF E L+I A+I+T+G K +D F +T+ G
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKG 842
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+ +
Sbjct: 789 KEHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTN-EKGIALTE 847
Query: 107 PKRLSTIKELLFNVLRG 123
+R LL NVL G
Sbjct: 848 EER-----GLLENVLYG 859
>gi|159484292|ref|XP_001700192.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272508|gb|EDO98307.1| predicted protein [Chlamydomonas reinhardtii]
Length = 273
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 244 RERVIQCLEAAIERRASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVK 303
R RV+Q E + L + T DR GLL DI R+ ++ +L++ AEI T G K
Sbjct: 175 RRRVVQTTIDVTEAKNGVCSLLRIVTSDRPGLLVDIVRVLKDINLNVVSAEIETEGPLAK 234
Query: 304 DTFYVTDVTGNPVDPKII 321
D F++T G P++ ++
Sbjct: 235 DEFFIT-YHGEPLNSPMV 251
>gi|409391166|ref|ZP_11242858.1| PII uridylyltransferase [Gordonia rubripertincta NBRC 101908]
gi|403198979|dbj|GAB86092.1| PII uridylyltransferase [Gordonia rubripertincta NBRC 101908]
Length = 817
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 254 AIERRASEG-LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYV 308
A E A+EG + LE+ ++DR+GLLS +T + +N I+ A++ST+G V D F +
Sbjct: 714 APEPDAAEGTVLLEVRSDDRIGLLSRVTSVLEKNGADIRWAKVSTLGATVVDIFSL 769
>gi|294851544|ref|ZP_06792217.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
gi|294820133|gb|EFG37132.1| protein-P-II uridylyltransferase [Brucella sp. NVSL 07-0026]
Length = 934
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 31 ASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAA 90
+F R + + + T IE G D PGL SE+ +++DL ++ +A I T +++
Sbjct: 828 GAFKVEPRVEINNTLSNKFTVIEVEGLDLPGLLSELTGLISDLSLDIASAHITTFSEKVI 887
Query: 91 AVVHVTDHSTGYAIKDPKRLSTIKELLFNVL 121
+VTD G+ I + R IK L +L
Sbjct: 888 DSFYVTD-LVGHKISNATRQGNIKRKLLALL 917
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 7/56 (12%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
EGL+L GLLS++T + + SL I A I+T KV D+FYVTD+ G+ +
Sbjct: 852 EGLDLP-------GLLSELTGLISDLSLDIASAHITTFSEKVIDSFYVTDLVGHKI 900
>gi|238787238|ref|ZP_04631037.1| [Protein-PII] uridylyltransferase [Yersinia frederiksenii ATCC
33641]
gi|238724500|gb|EEQ16141.1| [Protein-PII] uridylyltransferase [Yersinia frederiksenii ATCC
33641]
Length = 892
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 73/177 (41%), Gaps = 34/177 (19%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V + + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVI-QCLEAAIER---------RASEGLE--------- 264
A F + DG P++ + R +I L+ A+ R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIIRHALQQAMTRTNYQHPRVRRLSSKLRHFSVPTETN 807
Query: 265 -----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 FLPTHNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|145355046|ref|XP_001421782.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144582020|gb|ABP00076.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 447
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTDVTGNPVDPKIIDS 323
L++ DRVGLL D+T E L++ RA ++T GK D FYVTD +P +
Sbjct: 147 LQVEAHDRVGLLHDVTLALWELQLTVHRAHVTTAPCGKAVDLFYVTDDLHELPNPSRVGD 206
Query: 324 IRRQ----IGHTKLQVKRSTILA-PKPPKETTTG 352
I R+ + T + R IL P P T G
Sbjct: 207 ISRRVKPVVARTPEALNRVNILVHPAPSFVTRQG 240
>gi|320160714|ref|YP_004173938.1| putative glutamate-ammonia-ligase adenylyltransferase [Anaerolinea
thermophila UNI-1]
gi|319994567|dbj|BAJ63338.1| putative glutamate-ammonia-ligase adenylyltransferase [Anaerolinea
thermophila UNI-1]
Length = 1219
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 251 LEAAIERRASEGLEL-ELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
LE ++ +SE L L + ++D VG L ++T + I R I T+ +V+D YVT
Sbjct: 670 LEIVVDNDSSEHLTLLHIQSQDTVGFLYELTNALAITGIYIDRVRIETVNQRVRDVLYVT 729
Query: 310 DVTGNPVDPKIIDSIRRQIGHTKLQVKRSTILAPKPPK 347
D+ GN + + R++ + +K T L P P
Sbjct: 730 DLNGNKITS---EEKLRELRTATVLIKHFTHLLPFSPN 764
>gi|126724979|ref|ZP_01740822.1| PII uridylyl-transferase [Rhodobacterales bacterium HTCC2150]
gi|126706143|gb|EBA05233.1| PII uridylyl-transferase [Rhodobacteraceae bacterium HTCC2150]
Length = 920
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
+E+ T DR GLL D+ R +++ I A I+T G +V DTFYV D+ G
Sbjct: 843 IEVDTRDRTGLLHDLARTLANSNIYIASAVIATYGVQVVDTFYVKDMFG 891
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 86/210 (40%), Gaps = 33/210 (15%)
Query: 54 FTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDR-AAAVVHVTDHSTGYAIKDPKRLST 112
F D PG+FS + LA NVV+A+ +T D AV + DH D R
Sbjct: 735 FASYDHPGIFSRMAGALALAGANVVDAKSYTTKDGLVTAVFWIQDHDG--KPYDETRYKR 792
Query: 113 IKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSR 172
+ +++ ++G R A DRD K R +D
Sbjct: 793 MTQMIDKTMKGEVVARDALV--------------------DRD-----KIKKREKDFRVP 827
Query: 173 PQVTVLNIEKD-YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
+T N D YT+I + ++DR LL D+ TL + + ++ T + FY++
Sbjct: 828 TTITFDNEGSDIYTIIEVDTRDRTGLLHDLARTLANSNIYIASAVIATYGVQVVDTFYVK 887
Query: 232 HVDGLPISSEAER----ERVIQCLEAAIER 257
+ GL +E ++ +R+I ++ ER
Sbjct: 888 DMFGLKFHNEGKQRTLEKRLINAIKQGAER 917
>gi|325578503|ref|ZP_08148603.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
gi|325159739|gb|EGC71869.1| protein-P-II uridylyltransferase [Haemophilus parainfluenzae ATCC
33392]
Length = 861
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 261 EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTG 313
E ELE+ D+ GLL+ I++IF E L+I A+I+T+G K +D F +T+ G
Sbjct: 790 EHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTNEKG 842
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKD 106
+EHT +E D+PGL +++ + +L N+ NA+I T ++A +T+ G A+ +
Sbjct: 789 KEHTELEVVALDKPGLLAQISQIFTELKLNICNAKITTVGEKAEDFFILTN-EKGIALTE 847
Query: 107 PKRLSTIKELLFNVLRG 123
+R LL NVL G
Sbjct: 848 EER-----GLLENVLYG 859
>gi|433658394|ref|YP_007275773.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
gi|432509082|gb|AGB10599.1| [Protein-PII] uridylyltransferase [Vibrio parahaemolyticus BB22OP]
Length = 874
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 1 MDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVGVMP 45
+D F V+D G+ I R VI ++ LE P+ +++ V +P
Sbjct: 733 IDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVDFLP 792
Query: 46 TE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
T+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T + G
Sbjct: 793 TKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSEAGG 850
>gi|417319179|ref|ZP_12105737.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
gi|328474369|gb|EGF45174.1| PII uridylyl-transferase [Vibrio parahaemolyticus 10329]
Length = 874
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 1 MDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVGVMP 45
+D F V+D G+ I R VI ++ LE P+ +++ V +P
Sbjct: 733 IDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVDFLP 792
Query: 46 TE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
T+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T + G
Sbjct: 793 TKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSEAGG 850
>gi|28899094|ref|NP_798699.1| PII uridylyl-transferase [Vibrio parahaemolyticus RIMD 2210633]
gi|260361365|ref|ZP_05774430.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
gi|260876824|ref|ZP_05889179.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|260895882|ref|ZP_05904378.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|260900384|ref|ZP_05908779.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|32363168|sp|Q87MD6.1|GLND_VIBPA RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|28807318|dbj|BAC60583.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus RIMD
2210633]
gi|308089359|gb|EFO39054.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus Peru-466]
gi|308091507|gb|EFO41202.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AN-5034]
gi|308108580|gb|EFO46120.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus AQ4037]
gi|308113668|gb|EFO51208.1| protein-P-II uridylyltransferase [Vibrio parahaemolyticus K5030]
Length = 874
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 1 MDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVGVMP 45
+D F V+D G+ I R VI ++ LE P+ +++ V +P
Sbjct: 733 IDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVDFLP 792
Query: 46 TE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
T+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T + G
Sbjct: 793 TKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSEAGG 850
>gi|390951027|ref|YP_006414786.1| (protein-PII) uridylyltransferase [Thiocystis violascens DSM 198]
gi|390427596|gb|AFL74661.1| (protein-PII) uridylyltransferase [Thiocystis violascens DSM 198]
Length = 894
Score = 44.3 bits (103), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKI-IDS 323
+ L T DR GLL+++ +F+ + ++ A+I+T+G +V D F++T P+ + +
Sbjct: 819 MRLNTLDRPGLLAEVGAVFQSCGIRLQNAKIATVGAEVDDVFFITSGDDTPITCETALAC 878
Query: 324 IRRQIGHTKLQVKRST 339
+RR+I H +L+ S
Sbjct: 879 LRREI-HDRLESHASN 893
>gi|255536729|ref|XP_002509431.1| glycogen phosphorylase, putative [Ricinus communis]
gi|223549330|gb|EEF50818.1| glycogen phosphorylase, putative [Ricinus communis]
Length = 949
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDSIRRQI 328
+R+GLL ITR+F+ L I++A + G TFYVTD GN + D + +D I++ +
Sbjct: 84 NRIGLLQVITRVFKLLGLRIEKATVELEGDHFAKTFYVTDSHGNRIEDAESLDKIKKAL 142
>gi|452751845|ref|ZP_21951590.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
gi|451961064|gb|EMD83475.1| [Protein-PII] uridylyltransferase [alpha proteobacterium JLT2015]
Length = 908
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+E+ DR GLL + R + ++I A I+T G + DTFY+TD+TG +D
Sbjct: 830 IEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDTFYMTDLTGQKLD 882
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 5/120 (4%)
Query: 5 NVIDCDGKKIRDKEVIDYIQQRLETDASFAPSLRSSVGVMPTEEH--TSIEFTGTDRPGL 62
++ D K+R +E + Q+ L + A +++ V V P + T IE DRPGL
Sbjct: 783 SIADVLAGKVRLRE--ELAQRPLPQRRADAFAVQPRVLVQPNASNRFTVIEVNAADRPGL 840
Query: 63 FSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 122
+ L D + +A I T+ +RA ++TD TG + +RL ++ L N ++
Sbjct: 841 LYALLRTLFDAKVTIHSAHITTYGERAVDTFYMTD-LTGQKLDGSQRLKGLETRLLNAVK 899
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 73/188 (38%), Gaps = 28/188 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAA-VVHVTDHSTGYAIKDPK 108
T + D PGL + ++ N+++A I T D A + + H G D
Sbjct: 717 TQVRTYSEDHPGLLMRLAGAISLCGANIIDARIHTTRDGMALNNIGIQGHG-GQPFGDAH 775
Query: 109 RLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVED 168
+L +K + +VL G R+ P +R R +
Sbjct: 776 QLDRLKRSIADVLAGKVRLREELAQRPLP-----QR--------------------RADA 810
Query: 169 KSSRPQVTVL-NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQE 227
+ +P+V V N +TVI + + DRP LL+ ++ TL D + + + T A
Sbjct: 811 FAVQPRVLVQPNASNRFTVIEVNAADRPGLLYALLRTLFDAKVTIHSAHITTYGERAVDT 870
Query: 228 FYIRHVDG 235
FY+ + G
Sbjct: 871 FYMTDLTG 878
>gi|297202641|ref|ZP_06920038.1| PII uridylyl-transferase [Streptomyces sviceus ATCC 29083]
gi|297148159|gb|EDY57250.2| PII uridylyl-transferase [Streptomyces sviceus ATCC 29083]
Length = 292
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ +D GLL I R + + ++ A +ST+G D FYVTD G P+ S+
Sbjct: 223 IEVRAQDAPGLLFRIGRALEDAGVRMRSAHVSTLGANAVDAFYVTDGKGAPLGAGEAASV 282
Query: 325 RRQIGHT 331
R++ T
Sbjct: 283 ARKLEET 289
>gi|237755359|ref|ZP_04583988.1| putative [Protein-PII] uridylyltransferase [Sulfurihydrogenibium
yellowstonense SS-5]
gi|237692490|gb|EEP61469.1| putative [Protein-PII] uridylyltransferase [Sulfurihydrogenibium
yellowstonense SS-5]
Length = 869
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
++ EDRVGLL DI +IF + L + + ST G +V+D FY+ V D K+++
Sbjct: 798 FDISGEDRVGLLFDIIKIFSKYDLYVHMVKASTQGLRVRDAFYIRTKNKEKVYDKKLLEK 857
Query: 324 IRRQI 328
++ +I
Sbjct: 858 VQNEI 862
>gi|197122569|ref|YP_002134520.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter sp. K]
gi|196172418|gb|ACG73391.1| UTP-GlnB uridylyltransferase, GlnD [Anaeromyxobacter sp. K]
Length = 930
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+++ T DRVGLL + R F E +S+ A I+T G + D FYV G P++
Sbjct: 859 VDVFTADRVGLLHTVARTFFELGVSVDLARIATEGHRAADAFYVRAADGRPLE 911
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 79/200 (39%), Gaps = 30/200 (15%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG-YAIK--- 105
T + T DRPGL + V VLA ++ +AE+++ + AA + + + ++
Sbjct: 736 TELALTARDRPGLLATVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRGPD 795
Query: 106 ----DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 161
+P R + L VL G + T RRL + RV
Sbjct: 796 DGPVEPARWRAARRDLVRVLAGEEPLDALMT-----------RRLRASSVAAKPLPRVPT 844
Query: 162 AVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 221
+ +++ S+R ++V+ + + DR LL + T ++ V + T
Sbjct: 845 KI-VIDNHSARA----------HSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATEG 893
Query: 222 TEAYQEFYIRHVDGLPISSE 241
A FY+R DG P+ E
Sbjct: 894 HRAADAFYVRAADGRPLEGE 913
>gi|86158117|ref|YP_464902.1| metal dependent phosphohydrolase [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774628|gb|ABC81465.1| metal dependent phosphohydrolase [Anaeromyxobacter dehalogenans
2CP-C]
Length = 930
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+++ T DRVGLL + R F E +S+ A I+T G + D FYV G P++
Sbjct: 859 VDVFTADRVGLLHTVARTFFELGVSVDLARIATEGHRAADAFYVRTADGRPLE 911
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 31/207 (14%)
Query: 50 TSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG-YAIK--- 105
T + T DRPGL + V VLA ++ +AE+++ + AA + + + ++
Sbjct: 736 TELALTARDRPGLLATVAGVLAAHRIDIQHAEVFSSSPDPAAAGWLAGRALDVFELRGPD 795
Query: 106 ----DPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEK 161
+P R + L VL G + T RRL + RV
Sbjct: 796 DGPVEPARWRAARRDLARVLAGEEPLDALMT-----------RRLRASTVAAKPLPRVPT 844
Query: 162 AVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR 221
+ +++ S+R ++V+ + + DR LL + T ++ V + T
Sbjct: 845 KI-VIDNHSARA----------HSVVDVFTADRVGLLHTVARTFFELGVSVDLARIATEG 893
Query: 222 TEAYQEFYIRHVDGLPISSEAERERVI 248
A FY+R DG P+ A+ ERV+
Sbjct: 894 HRAADAFYVRTADGRPLEG-AQAERVV 919
>gi|224117840|ref|XP_002317681.1| predicted protein [Populus trichocarpa]
gi|222860746|gb|EEE98293.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 44.3 bits (103), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 62/145 (42%), Gaps = 18/145 (12%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 230
E D VIT+ D+ L D+ + + G V+T Y F +
Sbjct: 17 EGDPAVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVFSVVGKSTTRWGL 76
Query: 231 ---RHVDGLPISSEAERERVIQCLEAAIER-RASEGLELELCTEDRVGLLSDITRIFREN 286
R V P S A I A ++ R + L+L DR GLL D+T + E
Sbjct: 77 LKKRLVGACPSCSSASG---ISYYTAELQPPRPPDVFLLKLACHDRKGLLHDVTGVLCEL 133
Query: 287 SLSIKRAEISTI-GGKVKDTFYVTD 310
L+IK+ ++ST G+V D F+VTD
Sbjct: 134 ELTIKKVKVSTTPDGRVMDLFFVTD 158
>gi|18409132|ref|NP_564944.1| transcription factor bHLH30 [Arabidopsis thaliana]
gi|75336852|sp|Q9S7Y1.1|BH030_ARATH RecName: Full=Transcription factor bHLH30; AltName: Full=Basic
helix-loop-helix protein 30; Short=AtbHLH30; Short=bHLH
30; AltName: Full=Transcription factor EN 53; AltName:
Full=bHLH transcription factor bHLH030
gi|12323209|gb|AAG51581.1|AC011665_2 putative DNA-binding protein [Arabidopsis thaliana]
gi|12324140|gb|AAG52041.1|AC011914_11 putative DNA-binding protein; 36199-34606 [Arabidopsis thaliana]
gi|18176098|gb|AAL59983.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|21689745|gb|AAM67516.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|332196721|gb|AEE34842.1| transcription factor bHLH30 [Arabidopsis thaliana]
Length = 368
Score = 44.3 bits (103), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
++ LC EDR LL D+ + + L +AEI+T+GG+VK+ +VT
Sbjct: 259 IKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFVT 305
>gi|335043535|ref|ZP_08536562.1| UTP:GlnB uridylyltransferase [Methylophaga aminisulfidivorans MP]
gi|333790149|gb|EGL56031.1| UTP:GlnB uridylyltransferase [Methylophaga aminisulfidivorans MP]
Length = 872
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+ L T DR GL+S I ++F + + A+I+T+G +V+D F++T N +D +++
Sbjct: 803 MSLHTHDRPGLVSAIAQVFLSCKVQLINAKINTLGDQVEDVFFITTADDNALDELEENAL 862
Query: 325 RRQI 328
+ Q+
Sbjct: 863 KEQL 866
>gi|238751453|ref|ZP_04612945.1| [Protein-PII] uridylyltransferase [Yersinia rohdei ATCC 43380]
gi|238710320|gb|EEQ02546.1| [Protein-PII] uridylyltransferase [Yersinia rohdei ATCC 43380]
Length = 892
Score = 44.3 bits (103), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 34/177 (19%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V + + T I + S DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLISRQATRGGTEIFIWSPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQ-CLEAAIE---------RRASEGLE--------- 264
A F + DG P++ + R +I+ L+ A+ RR S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD--RHPIIRDALQQAMTQPNYQHPRVRRLSPKLRHFSVPTETN 807
Query: 265 -----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 808 YLPTHNERRTYLELIALDQPGLLARVGEIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|262044764|ref|ZP_06017810.1| uridylyltransferase, partial [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259037876|gb|EEW39101.1| uridylyltransferase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 230
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 66/156 (42%), Gaps = 33/156 (21%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHG--MVNTGRTEAYQEFYIRHVDGLPISSEA 242
T I + S DRP LF VC D + + H + T A F + DG P+S++
Sbjct: 48 TEIFIWSPDRP-YLFAAVCGELDRRNLSVHDAQIFTTRDGMAMDTFIVLEPDGSPLSAD- 105
Query: 243 ERERVIQCLEAAIERRASEGLE-----------------------------LELCTEDRV 273
E + Q LE I +R+ + LEL D+
Sbjct: 106 RHEAIRQGLEQTITQRSWQPPAPRRQAAKLRHFSVDTEVNFLPTHTDRKSFLELIALDQP 165
Query: 274 GLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
GLL+ + ++F + +S+ A I+TIG +V+D F +
Sbjct: 166 GLLARVGQVFADLGISLHGARITTIGERVEDLFIIA 201
>gi|88706585|ref|ZP_01104288.1| [Protein-PII] uridylyltransferase [Congregibacter litoralis KT71]
gi|88699081|gb|EAQ96197.1| [Protein-PII] uridylyltransferase [Congregibacter litoralis KT71]
Length = 892
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ + DR GLL+ I +F E + + A+I T+G +V+D F+VTD P+ D + +
Sbjct: 818 LEVISLDRPGLLARIGEVFVEFGVICEAAKIQTLGERVEDVFFVTDTEQQPIRDEALAEK 877
Query: 324 IRRQIGHT 331
I+ I T
Sbjct: 878 IQAAIRDT 885
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 1 MDVFNVIDCDGKKIRDKE----VIDYIQQRLE--TDASFAPS------LRS-------SV 41
+D + V+D G + D E + Y+ +L T+A+F PS +RS ++
Sbjct: 748 LDTYFVLDSSGNAVEDVERLRHITSYLSDKLSPTTNANFIPSRLTPRRVRSFCLATETNM 807
Query: 42 GVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
+ P E + +E DRPGL + + V + A+I T +R V VTD
Sbjct: 808 RIDPVREVSVLEVISLDRPGLLARIGEVFVEFGVICEAAKIQTLGERVEDVFFVTD 863
>gi|356533259|ref|XP_003535183.1| PREDICTED: uncharacterized protein LOC100789465 [Glycine max]
Length = 411
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 18/145 (12%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYI---------- 230
+ D T++T+ D+ L D+ + + G V+T Y F++
Sbjct: 17 DGDPTLLTVNCPDKTGLGCDLCRIMLFFGLNIIRGDVSTDGKWCYIVFWVVGKQRTRWSL 76
Query: 231 ---RHVDGLPISSEAERERVIQCLEAAIE-RRASEGLELELCTEDRVGLLSDITRIFREN 286
R ++ P S A I + ++ + S+ L DR GLL D+T + E
Sbjct: 77 LKKRLIEACPSCSSASG---ISYYRSDLQPSKPSDVFLLNFSCHDRKGLLHDVTEVLCEL 133
Query: 287 SLSIKRAEISTI-GGKVKDTFYVTD 310
L+IK+ ++ST GKV D F++TD
Sbjct: 134 ELTIKKVKVSTTPDGKVMDLFFITD 158
>gi|297838649|ref|XP_002887206.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297333047|gb|EFH63465.1| basic helix-loop-helix family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
++ LC EDR LL D+ + + L +AEI+T+GG+VK+ +VT
Sbjct: 251 IKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFVT 297
>gi|383936728|ref|ZP_09990149.1| [protein-PII] uridylyltransferase [Rheinheimera nanhaiensis E407-8]
gi|383702156|dbj|GAB60240.1| [protein-PII] uridylyltransferase [Rheinheimera nanhaiensis E407-8]
Length = 874
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 40/91 (43%)
Query: 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAI 104
P T + D+P LF+ + A L N+ +A+I T+ D A V G A+
Sbjct: 686 PIRGGTQVFIYTKDQPKLFARLVAALDSKKVNIFDAQIMTNKDGYAMDTFVILEQNGEAV 745
Query: 105 KDPKRLSTIKELLFNVLRGYDDFRKAKTSLS 135
P R +IK L + G D + KT LS
Sbjct: 746 NSPSRQQSIKRALELYIAGKPDLSRQKTKLS 776
>gi|254513841|ref|ZP_05125902.1| protein-P-II uridylyltransferase [gamma proteobacterium NOR5-3]
gi|219676084|gb|EED32449.1| protein-P-II uridylyltransferase [gamma proteobacterium NOR5-3]
Length = 889
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
LE+ + DR GLL+ I +F E + + A+I T+G +V+D F++TD+ P+
Sbjct: 815 LEVISLDRPGLLARIGEVFVEFGVICEAAKIQTLGERVEDVFFITDMQQQPI 866
>gi|395491855|ref|ZP_10423434.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26617]
Length = 914
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPIS 239
E+ T++T+ + D P L + I ++ + ++T R A F ++ G P
Sbjct: 720 ERGATLVTVYAADHPGLFYRIAGAISIAGGNIIDARIHTTRDGMALDNFLVQDPVGRPFD 779
Query: 240 SEAERERVIQCLEAAIERRA---------------SEGLEL-----------------EL 267
+ + R+ + +E A+ R +E + E+
Sbjct: 780 EDGQLVRLKKAIEDALANRVKLVDRLLAKPLPRTRAEAFPIAPNVLIDNKASNRFTVIEV 839
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR LL + ++ ++I A ++T G + DTFY+TD+TG +
Sbjct: 840 NARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLTDLTGEKI 888
>gi|118602487|ref|YP_903702.1| UTP-GlnB uridylyltransferase, GlnD [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
gi|118567426|gb|ABL02231.1| UTP-GlnB uridylyltransferase, GlnD [Candidatus Ruthia magnifica
str. Cm (Calyptogena magnifica)]
Length = 839
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+LE+ D+ G+LS+I +F E +S+ A I+T+G +V+D F++++ P+
Sbjct: 771 QLEINVIDKQGILSNIAYVFFELDISLINARIATMGERVEDVFFISNAKNQPL 823
>gi|300724797|ref|YP_003714122.1| uridylyltransferase [Xenorhabdus nematophila ATCC 19061]
gi|297631339|emb|CBJ92034.1| uridylyltransferase [Xenorhabdus nematophila ATCC 19061]
Length = 884
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+EL D+ GLL+ + IF E +S+ A I+TIG +V+D F + D N + KI D +
Sbjct: 811 MELVALDQPGLLARVGNIFAELGVSLHGARITTIGERVEDFFVLADKDQNALHKKIRDEL 870
Query: 325 RRQI 328
++
Sbjct: 871 SERL 874
>gi|404254714|ref|ZP_10958682.1| PII uridylyl-transferase [Sphingomonas sp. PAMC 26621]
Length = 914
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 33/169 (19%)
Query: 181 EKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPIS 239
E+ T++T+ + D P L + I ++ + ++T R A F ++ G P
Sbjct: 720 ERGATLVTVYAADHPGLFYRIAGAISIAGGNIIDARIHTTRDGMALDNFLVQDPVGRPFD 779
Query: 240 SEAERERVIQCLEAAIERRA---------------SEGLEL-----------------EL 267
+ + R+ + +E A+ R +E + E+
Sbjct: 780 EDGQLLRLKKAIEDALANRVKLVDRLLAKPLPRTRAEAFPIAPNVLIDNKASNRFTVIEV 839
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
DR LL + ++ ++I A ++T G + DTFY+TD+TG +
Sbjct: 840 NARDRPALLHQLAHALFQSKVTIHSAHVATYGERAVDTFYLTDLTGEKI 888
>gi|116747933|ref|YP_844620.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
gi|116696997|gb|ABK16185.1| metal dependent phosphohydrolase [Syntrophobacter fumaroxidans
MPOB]
Length = 864
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
LE+ T DRVGLL I R E + I A+I+T +V D FYV G V DP+ ID
Sbjct: 788 LEVYTVDRVGLLYTIGRTLFELQIRISVAKITTKIDQVADVFYVRTHQGEKVSDPEQIDE 847
Query: 324 IRRQI 328
++R +
Sbjct: 848 LKRAL 852
>gi|383649266|ref|ZP_09959672.1| PII uridylyl-transferase [Streptomyces chartreusis NRRL 12338]
Length = 815
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ ++D GLL I R + S+ ++ A +ST+G D FYVT G P+ +S+
Sbjct: 746 IEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYVTGPEGAPLPGDEAESV 805
Query: 325 RRQIGHT 331
R++ T
Sbjct: 806 ARKLEET 812
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAER 244
TVI +RS+D P LLF I L D +V V+T A FY+ +G P+ + E
Sbjct: 744 TVIEVRSQDAPGLLFRIGRALEDASVLVRSAHVSTLGANAVDAFYVTGPEGAPLPGD-EA 802
Query: 245 ERVIQCLE 252
E V + LE
Sbjct: 803 ESVARKLE 810
>gi|297737872|emb|CBI27073.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
++ LC EDR LL D+ + + L +AEI+T+GG+VK+ ++T
Sbjct: 207 IKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFIT 253
>gi|429091997|ref|ZP_19154646.1| [Protein-PII] uridylyltransferase [Cronobacter dublinensis 1210]
gi|426743310|emb|CCJ80759.1| [Protein-PII] uridylyltransferase [Cronobacter dublinensis 1210]
Length = 891
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 38/187 (20%)
Query: 173 PQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFH-GMVNTGRTE-AYQEFYI 230
PQ T + T I + S DRP LF VC D + + H + T R + A F +
Sbjct: 702 PQAT-----RGGTEIFIWSPDRP-YLFAAVCAELDRRNLSVHDAQIFTTRDDMAMDTFIV 755
Query: 231 RHVDGLPISSEAERERVIQCLEAAIERRASEGLE-------------------------- 264
DG P+S + E + LE AI +R + +
Sbjct: 756 LEPDGSPLSPD-RHEAIRHGLEQAITQRTWQPPQPRRQPAKLRHFTVDTEVNFLPTHTER 814
Query: 265 ---LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKII 321
LEL D+ GLL+ + ++F + +S+ A I+TIG +V+D F + ++ +
Sbjct: 815 KSFLELIALDQPGLLARVGQVFADLGISLHGARITTIGERVEDLFIIATADRRGLNNLLQ 874
Query: 322 DSIRRQI 328
+R+++
Sbjct: 875 QEVRQRL 881
>gi|359148709|ref|ZP_09181829.1| PII uridylyl-transferase [Streptomyces sp. S4]
Length = 850
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ +D GLL I + + L ++ A +ST+G D FYVTD G P+
Sbjct: 781 IEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYVTDAGGRPL 832
>gi|332160590|ref|YP_004297167.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325664820|gb|ADZ41464.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330859596|emb|CBX69936.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica W22703]
Length = 892
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 32/176 (18%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIER---------RASEGLE---------- 264
A F + DG P++ + +I L+ A+ R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNF 808
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 809 LPTHNERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|433547816|ref|ZP_20503867.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica IP
10393]
gi|431791242|emb|CCO66907.1| [Protein-PII] uridylyltransferase [Yersinia enterocolitica IP
10393]
Length = 892
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 32/176 (18%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIER---------RASEGLE---------- 264
A F + DG P++ + +I L+ A+ R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNF 808
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 809 LPTHNERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|421744909|ref|ZP_16182832.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
gi|406686683|gb|EKC90781.1| (protein-PII) uridylyltransferase [Streptomyces sp. SM8]
Length = 849
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ +D GLL I + + L ++ A +ST+G D FYVTD G P+
Sbjct: 780 IEVRAQDAPGLLHRIGQALEGDGLRVRSAHVSTLGANAVDAFYVTDAGGRPL 831
>gi|123443487|ref|YP_001007460.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|420259722|ref|ZP_14762421.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|166232256|sp|A1JP85.1|GLND_YERE8 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|122090448|emb|CAL13316.1| [protein-PII] uridylyltransferase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|404512815|gb|EKA26651.1| PII uridylyl-transferase [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 892
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 32/176 (18%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIER---------RASEGLE---------- 264
A F + DG P++ + +I L+ A+ R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRLSPKLRHFSVPTETNF 808
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 809 LPTHNERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|109897572|ref|YP_660827.1| UTP-GlnB uridylyltransferase, GlnD [Pseudoalteromonas atlantica
T6c]
gi|109699853|gb|ABG39773.1| UTP-GlnB uridylyltransferase, GlnD [Pseudoalteromonas atlantica
T6c]
Length = 870
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 33/208 (15%)
Query: 43 VMPTEEHTSIEFT-----GTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTD 97
++ EHT+ T G D+ LF++V +VL +C++ +A+I ND +
Sbjct: 681 LVEANEHTAKSGTELLVYGKDKINLFAQVASVLDSRNCSIHDAQIMKTNDGYVFDSFIVL 740
Query: 98 HSTGYAIKDPKRLSTIKELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYE 157
+G I RLS++KE + N L+ PG ++ RR R +
Sbjct: 741 EQSGDRIDSASRLSSLKEAVTN-------------QLNKPGEEHQNRRKMS-----RQMK 782
Query: 158 RVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMV 217
+++ +V SS+P VT++ +E + D P LL + L +M++ + +
Sbjct: 783 QLDVPT-KVRFYSSQPDVTLVELE---------ALDAPGLLAKVGNLLVEMEFSLRMAKI 832
Query: 218 NTGRTEAYQEFYIRHVDGLPISSEAERE 245
T A F I + D ++ E E
Sbjct: 833 ATIGERAEDLFIISNSDDKALTQNQEIE 860
>gi|383816413|ref|ZP_09971811.1| PII uridylyl-transferase [Serratia sp. M24T3]
gi|383294718|gb|EIC83054.1| PII uridylyl-transferase [Serratia sp. M24T3]
Length = 898
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 80/192 (41%), Gaps = 29/192 (15%)
Query: 166 VEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
++ S++P V V + + T I + S D+P L + L + + T R
Sbjct: 697 LDHDSTKPLVLVSHQATRGGTEIFIWSPDKPYLFAAVAGELDRRNLSIHDAQIFTNRDGM 756
Query: 224 AYQEFYIRHVDGLPISSE-------AERERVIQCLEAAIERRASEGLE------------ 264
A F + DG P++ + A + ++Q + RR S L
Sbjct: 757 AMDTFIVLEPDGNPLTQDRHETTRFALEQAMLQAYQPPRARRPSPKLRNFSVPTEVSFLP 816
Query: 265 --------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+EL D+ GLL+ + +F + LS+ A ISTIG +V+D F + + +
Sbjct: 817 THTDRKTYMELIALDQPGLLARVGEVFSDLGLSLHGARISTIGERVEDLFILANSDRRAL 876
Query: 317 DPKIIDSIRRQI 328
D + I+R++
Sbjct: 877 DKQTRREIQRRL 888
>gi|147828198|emb|CAN66473.1| hypothetical protein VITISV_029959 [Vitis vinifera]
Length = 462
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD 310
C DR GLL D+T + E L+IKR ++ST G+V D F+VTD
Sbjct: 78 CYHDRKGLLHDVTEVLCELELTIKRVKVSTAPDGRVMDLFFVTD 121
>gi|147817636|emb|CAN64495.1| hypothetical protein VITISV_004035 [Vitis vinifera]
Length = 465
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD 310
L+ C DR GLL D+T + E L+IK+ ++ST G+V D F++TD
Sbjct: 152 LKFCCYDRKGLLHDVTEVLCELELTIKKVKVSTTPDGRVMDLFFITD 198
>gi|443623838|ref|ZP_21108327.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
gi|443342703|gb|ELS56856.1| putative protein-P-II uridylyltransferase [Streptomyces
viridochromogenes Tue57]
Length = 815
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ +D GLL I R + S+ ++ A +ST+G D FYVT G P+ + S+
Sbjct: 746 IEVRAQDAPGLLFRIGRALEDASVRVRSAHVSTLGANAVDAFYVTGPEGAPLPSEEAASV 805
Query: 325 RRQIGHT 331
R++ T
Sbjct: 806 ARKLEET 812
>gi|407791701|ref|ZP_11138781.1| PII uridylyl-transferase [Gallaecimonas xiamenensis 3-C-1]
gi|407199178|gb|EKE69199.1| PII uridylyl-transferase [Gallaecimonas xiamenensis 3-C-1]
Length = 856
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E DR GLL+ + ++F E +S+K A+I+TIG + +D F +T + G +
Sbjct: 787 VEFTALDRPGLLAQVGQVFAEQDISLKAAKITTIGERAEDFFILTTMAGEAL 838
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 262 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTDVTGNPVD-PK 319
G EL + T DR L + I + +LSI A++ T G D+ V + G+PV+ P
Sbjct: 677 GTELFVYTRDRAQLFACIASVLDGKNLSINDAQVMTSKDGWALDSLVVVERDGSPVESPS 736
Query: 320 IIDSIRRQIGHTKLQVKRSTILAPKP 345
+ S RR I LQ K PKP
Sbjct: 737 RVQSTRRAIEKALLQAK-----FPKP 757
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Query: 26 RLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH 85
++ TD +F PS R + T +EFT DRPGL ++V V A+ ++ A+I T
Sbjct: 770 QVSTDVTFLPSSR---------KQTLVEFTALDRPGLLAQVGQVFAEQDISLKAAKITTI 820
Query: 86 NDRA 89
+RA
Sbjct: 821 GERA 824
>gi|284008522|emb|CBA75047.1| PII uridylyl-transferase [Arsenophonus nasoniae]
Length = 887
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVD 317
+EL D+ GLL+ I IF E S+ + A I+TIG +V+D F +TD +D
Sbjct: 808 MELIALDQPGLLAQIGNIFTEMSVLLHGARITTIGERVEDLFVLTDQNNQALD 860
>gi|269966249|ref|ZP_06180338.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
gi|269829164|gb|EEZ83409.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus 40B]
Length = 877
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 1 MDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVGVMP 45
+D F V+D G+ I R VI ++ LE P+ +++ V +P
Sbjct: 736 IDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVDFLP 795
Query: 46 TE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
T+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T + G
Sbjct: 796 TKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAGG 853
>gi|262276529|ref|ZP_06054338.1| [Protein-PII] uridylyltransferase [Grimontia hollisae CIP 101886]
gi|262220337|gb|EEY71653.1| [Protein-PII] uridylyltransferase [Grimontia hollisae CIP 101886]
Length = 873
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 111/282 (39%), Gaps = 47/282 (16%)
Query: 66 VCAVLADLHCNVVNAEIWTHNDRA--AAVVHVTDHSTGYAIKDP----KRLSTIKELLFN 119
VC +AD+ N N E+W R A + + T + +++P +R+ ++L
Sbjct: 576 VCLTVADI--NATNPELWNSWKRTLLAELYYSTQKALRRGLENPPDIRERIRHNQQLASA 633
Query: 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVL- 178
+LR K SP I +R F ++++ + + + ++
Sbjct: 634 LLR--------KNGHSPREITLLWQRFKADYFLRHTHKQIAWHSENILSHEGKDPLVLIS 685
Query: 179 -NIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTE-AYQEFYIRHVDGL 236
N + T I + S+D+P L +V L V + T + A F + +
Sbjct: 686 KNATRGGTEIFVYSEDKPSLFARVVAALDKRNLSVHDAQIMTSKDGFALDTFMVLDANNE 745
Query: 237 PISSEAE---RERVIQCL--EAAIE---RRASEGLE--------------------LELC 268
I + RE V + L E AI +RA L LEL
Sbjct: 746 AIQPDRHDRIRESVAEALMQEGAITIPVKRAPRKLMAFKVKTQVNFLPTRIGRRTLLELI 805
Query: 269 TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
D GLL+ + +F +S++ A+I+TIG + +D F VTD
Sbjct: 806 ALDTPGLLAKVGAVFAREGVSLQAAKITTIGERAEDFFIVTD 847
>gi|258653313|ref|YP_003202469.1| PII uridylyl-transferase [Nakamurella multipartita DSM 44233]
gi|258556538|gb|ACV79480.1| UTP-GlnB uridylyltransferase, GlnD [Nakamurella multipartita DSM
44233]
Length = 786
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 173 PQVTVLNIEKDY-TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231
P+V V+ D TV+ +R+ D P LL+ + LT V V+T +A FY++
Sbjct: 702 PEVRVVESASDLSTVLEVRAHDLPGLLYTVSSALTAAGVSVVSARVDTLGADAVDVFYVQ 761
Query: 232 HVDGLPISSEAERE 245
DG P+S RE
Sbjct: 762 TPDGAPLSGSRARE 775
>gi|451970864|ref|ZP_21924088.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus E0666]
gi|451933281|gb|EMD80951.1| [Protein-PII] uridylyltransferase [Vibrio alginolyticus E0666]
Length = 874
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 1 MDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVGVMP 45
+D F V+D G+ I R VI ++ LE P+ +++ V +P
Sbjct: 733 IDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVDFLP 792
Query: 46 TE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
T+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T + G
Sbjct: 793 TKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAGG 850
>gi|307245459|ref|ZP_07527547.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307254413|ref|ZP_07536251.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307258872|ref|ZP_07540604.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
gi|306853800|gb|EFM86017.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306862712|gb|EFM94668.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306867223|gb|EFM99079.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 11 str. 56153]
Length = 850
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
EL T DR GLL+ ++ +F + L++ A+I+TIG +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 325 R 325
+
Sbjct: 841 K 841
>gi|418465785|ref|ZP_13036718.1| PII uridylyl-transferase [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359755820|gb|EHK89983.1| PII uridylyl-transferase [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 863
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
E+EL D+ GLL+D++ +F E L++ A+I+TIG K +D F +T+
Sbjct: 794 EMELFALDQAGLLADVSAVFCELELNLLNAKITTIGEKAEDFFILTN 840
>gi|238763982|ref|ZP_04624938.1| [Protein-PII] uridylyltransferase [Yersinia kristensenii ATCC
33638]
gi|238697799|gb|EEP90560.1| [Protein-PII] uridylyltransferase [Yersinia kristensenii ATCC
33638]
Length = 892
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 32/176 (18%)
Query: 166 VEDKSSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TE 223
+E S++P V V + T I + DRP L +V L V + T R
Sbjct: 690 LEHDSTKPLVLVSRQATRGGTEIFIWCPDRPSLFAAVVGELDRRNLSVHDAQIFTNRDGM 749
Query: 224 AYQEFYIRHVDGLPISSEAERERVIQCLEAAIER---------RASEGLE---------- 264
A F + DG P++ + +I L+ A+ R R S L
Sbjct: 750 AMDTFIVLEPDGSPLAQD-RHPIIIHALQQAMTRQNYQHPRVRRISPKLRHFSVPTETNF 808
Query: 265 ----------LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
LEL D+ GLL+ + IF + LS+ A I+TIG +V+D F + D
Sbjct: 809 LPTHNERRTYLELIALDQPGLLARVGDIFADLGLSLHSARITTIGERVEDLFVLAD 864
>gi|398782192|ref|ZP_10546010.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
gi|396996929|gb|EJJ07908.1| PII uridylyl-transferase [Streptomyces auratus AGR0001]
Length = 836
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316
+E+ +D GLL I R ++++ A IST+G D FYVTD G P+
Sbjct: 768 IEVRAQDAHGLLHRIGRALETAGVAVRSAHISTLGANAVDAFYVTDPDGEPL 819
>gi|343505423|ref|ZP_08742995.1| PII uridylyl-transferase [Vibrio ichthyoenteri ATCC 700023]
gi|342807721|gb|EGU42901.1| PII uridylyl-transferase [Vibrio ichthyoenteri ATCC 700023]
Length = 874
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 1 MDVFNVIDCDGKKI---RDKEVIDYIQQRLE-----------TDASFAP-SLRSSVGVMP 45
+D F V+D G I R K VI ++ L+ T + +++ V +P
Sbjct: 733 LDTFMVLDQHGDAIEVGRHKAVIKHLTHVLQDGRPTKIRTRRTPRNLQHFKVKTKVDFLP 792
Query: 46 TE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
++ + T++EF D PGL + V A ADLH N+ A+I T +RA + +T G
Sbjct: 793 SKSKKRTTLEFVALDTPGLLATVGATFADLHINLHAAKITTIGERAEDLFIITGAEGG 850
>gi|291280233|ref|YP_003497068.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
gi|290754935|dbj|BAI81312.1| protein-P-II uridylyltransferase [Deferribacter desulfuricans SSM1]
Length = 853
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-DPKIIDS 323
+++ TED++GLL I +F + +++++A+IST +V D+FYVTD + + + ID
Sbjct: 785 IDVFTEDKIGLLYKILSVFEDLGINVQKAKISTDVDRVVDSFYVTDKNYHKITEQTFIDK 844
Query: 324 IR 325
I+
Sbjct: 845 IK 846
>gi|416053164|ref|ZP_11578736.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347991322|gb|EGY32804.1| protein-P-II uridylyltransferase [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 863
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310
E+EL D+ GLL+D++ +F E L++ A+I+TIG K +D F +T+
Sbjct: 794 EMELFALDQAGLLADVSAVFCELELNLLNAKITTIGEKAEDFFILTN 840
>gi|326503086|dbj|BAJ99168.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505920|dbj|BAJ91199.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 79/192 (41%), Gaps = 34/192 (17%)
Query: 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDP 107
+ T +E T DR G + + L +L NVV A + + +T STG I DP
Sbjct: 83 DATIVEVTLGDRLGDLLDTMSALRNLGLNVVKASVCLDSSGKHNKFAITKSSTGRKIDDP 142
Query: 108 KRLSTIKELLFNVLRGYDDFRKAKTS------LSPPG-IMNRERRLHQIMFDDRDYERVE 160
+ L ++ + N + Y ++ + L PP +++ + H ++DD
Sbjct: 143 ELLEAVRLTIINNMLEYHPEASSQLAMGATFGLEPPTEVVDVDIATHIEIYDD------- 195
Query: 161 KAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG 220
P+ ++L +E S DRP LL D+V + D+ V G +T
Sbjct: 196 -----------GPERSLLVVE---------SADRPGLLVDLVKIIADINITVQSGEFDTE 235
Query: 221 RTEAYQEFYIRH 232
A +F++ +
Sbjct: 236 GLLAKAKFHVSY 247
>gi|190149913|ref|YP_001968438.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|307263237|ref|ZP_07544857.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
gi|189915044|gb|ACE61296.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|306871454|gb|EFN03178.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 13 str. N273]
Length = 850
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
EL T DR GLL+ ++ +F + L++ A+I+TIG +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLVNAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 325 R 325
+
Sbjct: 841 K 841
>gi|225441177|ref|XP_002268949.1| PREDICTED: uncharacterized protein LOC100265834 [Vitis vinifera]
gi|297739971|emb|CBI30153.3| unnamed protein product [Vitis vinifera]
Length = 411
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTD 310
L+ C DR GLL D+T + E L+IK+ ++ST G+V D F++TD
Sbjct: 110 LKFCCYDRKGLLHDVTEVLCELELTIKKVKVSTTPDGRVMDLFFITD 156
>gi|91223471|ref|ZP_01258736.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
gi|91191557|gb|EAS77821.1| PII uridylyl-transferase [Vibrio alginolyticus 12G01]
Length = 874
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 1 MDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVGVMP 45
+D F V+D G+ I R VI ++ LE P+ +++ V +P
Sbjct: 733 IDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVDFLP 792
Query: 46 TE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
T+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T + G
Sbjct: 793 TKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAGG 850
>gi|225423869|ref|XP_002278697.1| PREDICTED: transcription factor bHLH30 [Vitis vinifera]
Length = 349
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309
++ LC EDR LL D+ + + L +AEI+T+GG+VK+ ++T
Sbjct: 240 IKASLCCEDRTDLLPDLIKTLKALRLRTLKAEITTLGGRVKNVLFIT 286
>gi|262393517|ref|YP_003285371.1| [protein-PII] uridylyltransferase [Vibrio sp. Ex25]
gi|262337111|gb|ACY50906.1| [Protein-PII] uridylyltransferase [Vibrio sp. Ex25]
Length = 874
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 1 MDVFNVIDCDGKKI---RDKEVIDYIQQRLET------DASFAPS------LRSSVGVMP 45
+D F V+D G+ I R VI ++ LE P+ +++ V +P
Sbjct: 733 IDTFMVLDQHGEAIDESRHAAVIKHLTHVLEAGRPTKIKTRRTPNKLQHFNVKTKVDFLP 792
Query: 46 TE--EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTG 101
T+ +HT +EF D PGL ++V ADL+ N+ A+I T +RA + +T + G
Sbjct: 793 TKGKKHTLMEFVALDTPGLLAKVGRTFADLNINLHGAKITTIGERAEDLFILTSDAGG 850
>gi|290957105|ref|YP_003488287.1| protein P-II uridylyltransferase [Streptomyces scabiei 87.22]
gi|260646631|emb|CBG69728.1| putative protein P-II uridylyltransferase [Streptomyces scabiei
87.22]
Length = 816
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ +D GLL I R + L ++ A +ST+G D FYVT G P+ S+
Sbjct: 747 IEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVTGTDGAPLPGDEAASV 806
Query: 325 RRQIGHT 331
R++ T
Sbjct: 807 ARKLEET 813
>gi|224109832|ref|XP_002315327.1| predicted protein [Populus trichocarpa]
gi|222864367|gb|EEF01498.1| predicted protein [Populus trichocarpa]
Length = 411
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 15/68 (22%)
Query: 268 CTEDRVGLLSDITRIFRENSLSIKRAEISTI-GGKVKDTFYVTDVTGNPVDPKIIDSIRR 326
C DR GLL D+T + E L+IKR ++ST G+V D F++TD R
Sbjct: 116 CAYDREGLLHDVTEVLWELELTIKRVKVSTAPDGRVLDLFFITD--------------NR 161
Query: 327 QIGHTKLQ 334
++ HTK++
Sbjct: 162 ELLHTKMR 169
>gi|157372027|ref|YP_001480016.1| PII uridylyl-transferase [Serratia proteamaculans 568]
gi|166990447|sp|A8GIE8.1|GLND_SERP5 RecName: Full=[Protein-PII] uridylyltransferase; Short=PII
uridylyl-transferase; AltName: Full=UTase; AltName:
Full=Uridylyl-removing enzyme
gi|157323791|gb|ABV42888.1| UTP-GlnB uridylyltransferase, GlnD [Serratia proteamaculans 568]
Length = 892
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 30/180 (16%)
Query: 170 SSRPQVTV-LNIEKDYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQE 227
S++P V V + T I + S DRP L + + V + T R A
Sbjct: 694 STKPLVLVSRQATRGGTEIFIWSPDRPYLFAAVAGEMDRRNLSVHDAQIFTNRDGMAMDT 753
Query: 228 FYIRHVDGLPISSE---AERERVIQCL-----EAAIERRASEGLE--------------- 264
F + DG P++ + A R ++Q + + RR S L
Sbjct: 754 FIVLEPDGSPLAQDRHTAIRHALLQAITQREYQPPRVRRPSSKLRHFSVPTEVSFLPTHT 813
Query: 265 -----LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPK 319
LEL D+ GLL+ + +F + +LS+ A ISTIG +V+D F + D ++P+
Sbjct: 814 DRRSYLELTALDQPGLLARVGEVFADLNLSLHGARISTIGERVEDLFILADSDRRALNPE 873
>gi|423205628|ref|ZP_17192184.1| protein-P-II uridylyltransferase [Aeromonas veronii AMC34]
gi|404623903|gb|EKB20752.1| protein-P-II uridylyltransferase [Aeromonas veronii AMC34]
Length = 878
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+EL D GLL+ I +F++ LS+ A+I+T G +V+D F +T + G P+ + +
Sbjct: 803 MELTALDTPGLLARIGAVFQQCGLSLHAAKIATFGERVEDFFSLTSLEGEPLTAEQQQQL 862
Query: 325 RRQIGH 330
++ H
Sbjct: 863 EERLVH 868
>gi|307256623|ref|ZP_07538403.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
gi|306864871|gb|EFM96774.1| [Protein-PII] uridylyltransferase [Actinobacillus pleuropneumoniae
serovar 10 str. D13039]
Length = 850
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
EL T DR GLL+ ++ +F + L++ A+I+TIG +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 325 R 325
+
Sbjct: 841 K 841
>gi|165976013|ref|YP_001651606.1| PII uridylyl-transferase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|165876114|gb|ABY69162.1| uridylyltransferase [Actinobacillus pleuropneumoniae serovar 3 str.
JL03]
Length = 850
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
EL T DR GLL+ ++ +F + L++ A+I+TIG +V+D F VT +D K ++
Sbjct: 781 FELFTLDREGLLARVSSVFNQLGLNLINAKITTIGERVEDFFVVTTQQHQALDDKAQKAL 840
Query: 325 R 325
+
Sbjct: 841 K 841
>gi|304320147|ref|YP_003853790.1| PII uridylyl-transferase [Parvularcula bermudensis HTCC2503]
gi|303299050|gb|ADM08649.1| PII uridylyl-transferase [Parvularcula bermudensis HTCC2503]
Length = 872
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 52 IEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLS 111
+E DRPGL + LA++ ++ A + T+ RA ++ D + GY I+DP+R+
Sbjct: 802 VEVETRDRPGLLHLLAVSLAEIGVDIEFALVATYGHRAVDTFYLQD-APGYKIEDPRRIE 860
Query: 112 TIKELLFNVLRGYDD 126
IK +LR DD
Sbjct: 861 AIKR---GLLRALDD 872
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 259 ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV-D 317
+S+ L +E+ T DR GLL + E + I+ A ++T G + DTFY+ D G + D
Sbjct: 796 SSKALVVEVETRDRPGLLHLLAVSLAEIGVDIEFALVATYGHRAVDTFYLQDAPGYKIED 855
Query: 318 PKIIDSIRRQI 328
P+ I++I+R +
Sbjct: 856 PRRIEAIKRGL 866
>gi|456388589|gb|EMF54029.1| glnD protein [Streptomyces bottropensis ATCC 25435]
Length = 816
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSI 324
+E+ +D GLL I R + L ++ A +ST+G D FYVT G P+ S+
Sbjct: 747 IEVRAQDAPGLLHRIGRALEDAHLRVRSAHVSTLGANAVDAFYVTGTDGAPLPGDEAASV 806
Query: 325 RRQIGHT 331
R++ T
Sbjct: 807 ARKLEET 813
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,651,597,487
Number of Sequences: 23463169
Number of extensions: 229155427
Number of successful extensions: 580194
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1475
Number of HSP's successfully gapped in prelim test: 409
Number of HSP's that attempted gapping in prelim test: 573362
Number of HSP's gapped (non-prelim): 5598
length of query: 374
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 230
effective length of database: 8,980,499,031
effective search space: 2065514777130
effective search space used: 2065514777130
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)