Query 017268
Match_columns 374
No_of_seqs 287 out of 2030
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 11:42:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017268.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017268hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.8 6.1E-19 2.1E-23 159.0 13.7 143 183-330 4-161 (195)
2 1u8s_A Glycine cleavage system 99.8 4E-17 1.4E-21 146.5 18.0 139 184-330 6-164 (192)
3 2nyi_A Unknown protein; protei 99.7 3.9E-17 1.3E-21 147.2 14.1 157 48-254 4-162 (195)
4 1u8s_A Glycine cleavage system 99.7 1.2E-15 4E-20 136.9 16.2 156 47-253 4-164 (192)
5 3p96_A Phosphoserine phosphata 98.9 4.2E-08 1.4E-12 97.3 19.6 122 183-309 11-149 (415)
6 3p96_A Phosphoserine phosphata 98.8 2.4E-08 8.4E-13 99.1 13.8 140 48-233 11-151 (415)
7 2f06_A Conserved hypothetical 98.8 2.1E-07 7.3E-12 78.9 15.0 112 185-308 7-118 (144)
8 2f06_A Conserved hypothetical 98.3 4E-05 1.4E-09 64.7 16.4 113 49-230 6-118 (144)
9 1zpv_A ACT domain protein; str 98.2 1.2E-05 4.1E-10 62.3 10.7 64 184-253 5-68 (91)
10 1zpv_A ACT domain protein; str 98.2 9.4E-06 3.2E-10 62.9 9.7 65 48-119 4-68 (91)
11 2ko1_A CTR148A, GTP pyrophosph 98.0 3.2E-05 1.1E-09 59.1 9.2 64 262-330 5-68 (88)
12 2ko1_A CTR148A, GTP pyrophosph 97.8 0.00013 4.3E-09 55.7 9.0 48 49-96 5-52 (88)
13 2re1_A Aspartokinase, alpha an 97.7 0.00023 7.9E-09 61.7 11.2 114 183-309 24-149 (167)
14 3obi_A Formyltetrahydrofolate 97.7 0.0013 4.4E-08 62.2 17.1 110 183-297 5-124 (288)
15 3o1l_A Formyltetrahydrofolate 97.7 0.0008 2.7E-08 64.0 15.3 110 183-297 21-140 (302)
16 3n0v_A Formyltetrahydrofolate 97.6 0.0017 5.7E-08 61.3 15.4 108 184-297 8-125 (286)
17 3lou_A Formyltetrahydrofolate 97.5 0.0022 7.4E-08 60.7 15.3 111 183-297 9-130 (292)
18 3o1l_A Formyltetrahydrofolate 97.5 0.00042 1.4E-08 65.9 10.2 67 47-119 20-88 (302)
19 3nrb_A Formyltetrahydrofolate 97.5 0.0032 1.1E-07 59.4 16.1 108 183-297 6-123 (287)
20 3obi_A Formyltetrahydrofolate 97.4 0.00066 2.2E-08 64.2 9.9 66 48-119 5-72 (288)
21 2dtj_A Aspartokinase; protein- 97.4 0.0015 5.2E-08 57.1 11.2 131 182-329 13-157 (178)
22 3n0v_A Formyltetrahydrofolate 97.3 0.00071 2.4E-08 63.9 9.3 68 48-123 7-76 (286)
23 2re1_A Aspartokinase, alpha an 97.3 0.014 4.8E-07 50.3 16.8 114 43-215 19-137 (167)
24 3lou_A Formyltetrahydrofolate 97.3 0.00085 2.9E-08 63.5 9.0 69 47-119 8-78 (292)
25 2dt9_A Aspartokinase; protein- 97.2 0.0021 7.2E-08 55.5 10.5 119 182-310 14-142 (167)
26 3nrb_A Formyltetrahydrofolate 97.1 0.0012 4E-08 62.4 8.0 65 47-119 5-71 (287)
27 2dtj_A Aspartokinase; protein- 97.1 0.047 1.6E-06 47.5 17.7 113 44-215 10-129 (178)
28 2f1f_A Acetolactate synthase i 97.0 0.0021 7.1E-08 55.7 8.4 62 263-330 4-67 (164)
29 2f1f_A Acetolactate synthase i 96.8 0.004 1.4E-07 53.9 8.7 63 49-119 3-67 (164)
30 3l76_A Aspartokinase; alloster 96.8 0.24 8.1E-06 51.3 23.6 217 46-329 352-589 (600)
31 2pc6_A Probable acetolactate s 96.8 0.0038 1.3E-07 54.1 8.1 62 263-330 5-68 (165)
32 3l76_A Aspartokinase; alloster 96.7 0.23 7.8E-06 51.4 22.4 185 48-297 269-480 (600)
33 2jhe_A Transcription regulator 96.7 0.0057 2E-07 52.4 8.6 59 264-330 2-60 (190)
34 2pc6_A Probable acetolactate s 96.7 0.0068 2.3E-07 52.4 8.7 63 49-119 4-68 (165)
35 2dt9_A Aspartokinase; protein- 96.6 0.031 1E-06 48.0 12.4 111 44-214 11-128 (167)
36 3s1t_A Aspartokinase; ACT doma 96.6 0.018 6.1E-07 50.5 10.9 133 183-329 15-158 (181)
37 2fgc_A Acetolactate synthase, 96.4 0.014 4.8E-07 51.6 9.4 63 262-330 29-93 (193)
38 3ab4_A Aspartokinase; aspartat 96.2 0.062 2.1E-06 53.2 13.7 133 183-329 263-406 (421)
39 2fgc_A Acetolactate synthase, 95.9 0.04 1.4E-06 48.7 9.7 99 184-292 29-142 (193)
40 1y7p_A Hypothetical protein AF 95.7 0.014 4.9E-07 52.4 6.0 37 263-299 5-41 (223)
41 4go7_X Aspartokinase; transfer 95.7 0.047 1.6E-06 48.6 9.2 134 182-329 33-177 (200)
42 2jhe_A Transcription regulator 95.5 0.066 2.2E-06 45.5 9.3 59 186-253 2-60 (190)
43 1y7p_A Hypothetical protein AF 95.3 0.031 1E-06 50.3 6.6 48 185-232 5-57 (223)
44 3s1t_A Aspartokinase; ACT doma 95.1 1.5 5.1E-05 38.0 17.4 114 44-216 11-131 (181)
45 3ab4_A Aspartokinase; aspartat 95.0 1.1 3.9E-05 44.0 17.9 108 48-214 263-377 (421)
46 4go7_X Aspartokinase; transfer 94.1 0.55 1.9E-05 41.6 11.7 118 40-216 25-150 (200)
47 3c1m_A Probable aspartokinase; 94.0 0.34 1.2E-05 48.6 11.4 129 183-329 317-468 (473)
48 2qmx_A Prephenate dehydratase; 93.6 0.17 5.8E-06 47.4 7.7 55 262-317 200-255 (283)
49 3k5p_A D-3-phosphoglycerate de 93.0 0.61 2.1E-05 46.0 11.1 77 19-95 313-389 (416)
50 1sc6_A PGDH, D-3-phosphoglycer 92.9 0.66 2.2E-05 45.6 11.1 77 19-96 302-378 (404)
51 3luy_A Probable chorismate mut 92.7 0.58 2E-05 44.7 10.2 54 263-317 207-263 (329)
52 3mwb_A Prephenate dehydratase; 92.7 0.26 9E-06 46.8 7.6 93 206-317 162-257 (313)
53 1ygy_A PGDH, D-3-phosphoglycer 92.4 0.56 1.9E-05 47.6 10.2 63 260-326 452-516 (529)
54 1sc6_A PGDH, D-3-phosphoglycer 91.9 0.42 1.4E-05 46.9 8.4 50 183-232 330-379 (404)
55 2qmw_A PDT, prephenate dehydra 91.3 0.59 2E-05 43.3 8.1 83 207-312 153-239 (267)
56 3c1m_A Probable aspartokinase; 91.3 3 0.0001 41.6 14.0 116 46-213 315-436 (473)
57 1ygy_A PGDH, D-3-phosphoglycer 90.0 1.1 3.9E-05 45.4 9.6 62 183-249 453-516 (529)
58 3tvi_A Aspartokinase; structur 89.3 0.7 2.4E-05 46.0 7.3 117 183-310 297-423 (446)
59 3tvi_A Aspartokinase; structur 85.7 12 0.00041 37.0 13.8 108 48-217 297-410 (446)
60 3k5p_A D-3-phosphoglycerate de 84.9 2.3 8E-05 41.8 8.0 49 183-231 342-390 (416)
61 3mah_A Aspartokinase; aspartat 83.3 1.8 6.1E-05 36.4 5.7 110 183-311 17-136 (157)
62 3mtj_A Homoserine dehydrogenas 81.4 1.5 5.2E-05 43.6 5.1 50 262-311 359-410 (444)
63 2cdq_A Aspartokinase; aspartat 80.7 3 0.0001 42.1 7.2 119 183-310 340-468 (510)
64 2qmx_A Prephenate dehydratase; 78.7 3.7 0.00013 38.2 6.6 49 184-232 200-249 (283)
65 3luy_A Probable chorismate mut 78.2 12 0.00039 35.6 9.9 52 184-236 206-260 (329)
66 3mwb_A Prephenate dehydratase; 76.3 4.3 0.00015 38.4 6.3 50 183-232 200-251 (313)
67 3mtj_A Homoserine dehydrogenas 76.1 8.4 0.00029 38.1 8.7 49 184-232 359-409 (444)
68 1phz_A Protein (phenylalanine 75.8 2.9 0.0001 41.1 5.2 50 262-312 34-84 (429)
69 2qmw_A PDT, prephenate dehydra 68.2 16 0.00056 33.5 8.1 51 183-233 185-239 (267)
70 1ib8_A Conserved protein SP14. 61.0 34 0.0011 28.9 8.2 91 198-297 15-111 (164)
71 3mah_A Aspartokinase; aspartat 36.1 22 0.00074 29.5 2.9 44 263-310 19-65 (157)
72 1tdj_A Biosynthetic threonine 36.1 93 0.0032 31.2 8.0 110 184-301 338-471 (514)
73 3g12_A Putative lactoylglutath 35.4 96 0.0033 23.8 6.6 49 183-238 66-115 (128)
74 3g12_A Putative lactoylglutath 30.7 1E+02 0.0036 23.6 6.1 48 262-316 67-115 (128)
75 1phz_A Protein (phenylalanine 30.5 36 0.0012 33.4 3.7 52 45-96 30-82 (429)
76 2cdq_A Aspartokinase; aspartat 30.3 1.2E+02 0.0042 30.2 7.8 63 263-329 342-409 (510)
77 2j0w_A Lysine-sensitive aspart 26.5 29 0.00099 34.2 2.3 119 183-311 307-434 (449)
78 3r6a_A Uncharacterized protein 24.7 1.7E+02 0.0058 23.0 6.5 47 263-316 67-113 (144)
79 1zhv_A Hypothetical protein AT 23.7 61 0.0021 26.4 3.4 33 271-308 74-106 (134)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.79 E-value=6.1e-19 Score=159.05 Aligned_cols=143 Identities=13% Similarity=0.107 Sum_probs=115.0
Q ss_pred CEEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhhc----
Q 017268 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERR---- 258 (374)
Q Consensus 183 ~~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~r---- 258 (374)
..++|+|+|+|||||++.|+++|+++|+||.++++++..|.+.-.|.|..+.. ....+++.|++.|...+...
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~~~---~~~~~~~~l~~~L~~~~~~~~~~~ 80 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLNAK---DGKLIQSALESALPGFQISTRRAS 80 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSS---SSHHHHHHHHHHSTTCEEEEEECC
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEecCc---cchhHHHHHHHHHHHHHHhcCCeE
Confidence 35789999999999999999999999999999999998776665888876532 22336777777776543210
Q ss_pred -c--------CCceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecC--CeeeeEEEEEcCCCCCCChhHHHHHHHH
Q 017268 259 -A--------SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG--GKVKDTFYVTDVTGNPVDPKIIDSIRRQ 327 (374)
Q Consensus 259 -~--------~~~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g--~~~~D~Fyv~d~~g~~l~~~~~~~l~~~ 327 (374)
. ...++|+|.|+|||||+++|+++|+++|+||..++..|.+ ++..+.||++...+.| .+.. ++|+++
T Consensus 81 ~~~~~~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~-~~~~-~~l~~~ 158 (195)
T 2nyi_A 81 SVAERHVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETETLPAPFAGFTLFRMGSRVAFP-FPLY-QEVVTA 158 (195)
T ss_dssp CC----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE-GGGH-HHHHHH
T ss_pred EEEeCCcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeeecccccCCCCeEEEEEEEEcC-CCcc-HHHHHH
Confidence 1 1258999999999999999999999999999999999998 7789999998876554 2345 778887
Q ss_pred Hhh
Q 017268 328 IGH 330 (374)
Q Consensus 328 l~~ 330 (374)
|..
T Consensus 159 l~~ 161 (195)
T 2nyi_A 159 LSR 161 (195)
T ss_dssp HHH
T ss_pred HHH
Confidence 775
No 2
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.75 E-value=4e-17 Score=146.49 Aligned_cols=139 Identities=17% Similarity=0.199 Sum_probs=111.1
Q ss_pred EEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh------
Q 017268 184 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER------ 257 (374)
Q Consensus 184 ~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~------ 257 (374)
..+|+|+|+||||++++++++|+++|+||.++++++.+|.+.-.|.|..+. ..+++|++.|...+..
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~~-------~~~~~l~~~L~~~~~~~~~~~~ 78 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGSP-------SNITRVETTLPLLGQQHDLITM 78 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEECH-------HHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecCC-------CCHHHHHHHHHHHHHhcCCEEE
Confidence 578999999999999999999999999999999999888777788887541 3677888888765421
Q ss_pred --ccC--------CceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecCC----eeeeEEEEEcCCCCCCChhHHHH
Q 017268 258 --RAS--------EGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGG----KVKDTFYVTDVTGNPVDPKIIDS 323 (374)
Q Consensus 258 --r~~--------~~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~----~~~D~Fyv~d~~g~~l~~~~~~~ 323 (374)
+.+ ..++|+|.++||||+|++|+++|+++|+||.+++..|.++ +..+.||++...+.| .+...++
T Consensus 79 ~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~-~~~~~~~ 157 (192)
T 1u8s_A 79 MKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD-SGCNLMQ 157 (192)
T ss_dssp EEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEEEC--------CEEEEEEEEEEC-TTSCHHH
T ss_pred EEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC-CCCCHHH
Confidence 111 2479999999999999999999999999999999999984 689999998865444 2335677
Q ss_pred HHHHHhh
Q 017268 324 IRRQIGH 330 (374)
Q Consensus 324 l~~~l~~ 330 (374)
|+++|..
T Consensus 158 l~~~l~~ 164 (192)
T 1u8s_A 158 LQEEFDA 164 (192)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777775
No 3
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.73 E-value=3.9e-17 Score=147.17 Aligned_cols=157 Identities=13% Similarity=0.134 Sum_probs=109.8
Q ss_pred CeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHcCCCcc
Q 017268 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 127 (374)
Q Consensus 48 ~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~~~ 127 (374)
..++|+|+|+||||||++|+++|+++|+||++|++++..+++...|.|..+ +. ..+.+++.|++.|..++.+ ..
T Consensus 4 ~~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m~~~v~~~--~~--~~~~~~~~l~~~L~~~~~~-~~- 77 (195)
T 2nyi_A 4 QSFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACLGGDFAMIVLVSLN--AK--DGKLIQSALESALPGFQIS-TR- 77 (195)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SS--SSHHHHHHHHHHSTTCEEE-EE-
T ss_pred eEEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEEEEEEEec--Cc--cchhHHHHHHHHHHHHHHh-cC-
Confidence 467999999999999999999999999999999999999998888888653 22 2233566676666553322 11
Q ss_pred cccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeCCCcchHHHHHHHHHh
Q 017268 128 RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTD 207 (374)
Q Consensus 128 ~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~DrpGLl~~i~~~l~~ 207 (374)
+. +. .+ . .+. ......++|+|.|+|||||+++|+++|++
T Consensus 78 ------~~-~~-------~~--------------------~---~~~----~~~~~~~iltv~g~DrpGiva~Vt~~La~ 116 (195)
T 2nyi_A 78 ------RA-SS-------VA--------------------E---RHV----SPDTREYELYVEGPDSEGIVEAVTAVLAK 116 (195)
T ss_dssp ------EC-CC-------C---------------------------C----CTTEEEEEEEEEEECCTTHHHHHHHHHHH
T ss_pred ------Ce-EE-------EE--------------------e---CCc----CCCCcEEEEEEEeCCCcCHHHHHHHHHHH
Confidence 10 00 00 0 000 11235688999999999999999999999
Q ss_pred CCceEEEEEEEecC--CeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHH
Q 017268 208 MQYVVFHGMVNTGR--TEAYQEFYIRHVDGLPISSEAERERVIQCLEAA 254 (374)
Q Consensus 208 ~glnI~~A~i~T~~--g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~ 254 (374)
+|+||.+++..|.+ ++..+.|++....+.+ +... +.|++.|...
T Consensus 117 ~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~ 162 (195)
T 2nyi_A 117 KGANIVELETETLPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRV 162 (195)
T ss_dssp TTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHH
T ss_pred cCCCEEEceeeecccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHH
Confidence 99999999999976 3444566665433221 1224 6677766543
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.67 E-value=1.2e-15 Score=136.90 Aligned_cols=156 Identities=17% Similarity=0.216 Sum_probs=109.8
Q ss_pred CCeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHcCCCc
Q 017268 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDD 126 (374)
Q Consensus 47 ~~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~~ 126 (374)
.....|+|+|+||||++++|+++|+.+|+||+++++++..+.+...+.|..+ ...++.|++.|.+++ ++..
T Consensus 4 ~~~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~~~~v~~~--------~~~~~~l~~~L~~~~-~~~~ 74 (192)
T 1u8s_A 4 TQHLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTLLMLISGS--------PSNITRVETTLPLLG-QQHD 74 (192)
T ss_dssp CEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEEC--------HHHHHHHHHHHHHHH-HHHT
T ss_pred CcEEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEEEEEEecC--------CCCHHHHHHHHHHHH-HhcC
Confidence 3457899999999999999999999999999999999998888888888642 135678888888755 3222
Q ss_pred ccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEc-CCCCEEEEEEEeCCCcchHHHHHHHH
Q 017268 127 FRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLN-IEKDYTVITMRSKDRPKLLFDIVCTL 205 (374)
Q Consensus 127 ~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~-~~~~~t~v~V~~~DrpGLl~~i~~~l 205 (374)
+. .+.+. .. .++ + .....++|+|.|+||||++++|+++|
T Consensus 75 -------~~--------~~~~~-------~~-------------~~~-----~~~~~~~~~l~v~~~D~~Gil~~v~~~l 114 (192)
T 1u8s_A 75 -------LI--------TMMKR-------TS-------------PHD-----HQTHAYTVEVYVESDDKLGLTEKFTQFF 114 (192)
T ss_dssp -------CE--------EEEEE-------EC-------------CCC-----CCCCSEEEEEEEEESCCTTHHHHHHHHH
T ss_pred -------CE--------EEEEe-------CC-------------CCC-----CccCCceEEEEEEeCCCccHHHHHHHHH
Confidence 10 00100 00 001 1 23456889999999999999999999
Q ss_pred HhCCceEEEEEEEecCC----eEEEEEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 017268 206 TDMQYVVFHGMVNTGRT----EAYQEFYIRHVDGLPISSEAERERVIQCLEA 253 (374)
Q Consensus 206 ~~~glnI~~A~i~T~~g----~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~ 253 (374)
+++|+||.+++..|.+. +..+.|++....+.+ +....+.|++.|..
T Consensus 115 ~~~~~nI~~~~~~t~~~~~~~~~~~~F~~~~~~~~~--~~~~~~~l~~~l~~ 164 (192)
T 1u8s_A 115 AQRQIGMASLSAQTISKDKLHSEQNQFHIAISARVD--SGCNLMQLQEEFDA 164 (192)
T ss_dssp HHTTCCEEEEEEEEEC--------CEEEEEEEEEEC--TTSCHHHHHHHHHH
T ss_pred HHcCCcHHHhhhhcccCCccCCCCCEEEEEEEEeCC--CCCCHHHHHHHHHH
Confidence 99999999999999763 455666665432211 11134566666654
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.94 E-value=4.2e-08 Score=97.34 Aligned_cols=122 Identities=11% Similarity=0.018 Sum_probs=92.8
Q ss_pred CEEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHH---Hh---
Q 017268 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA---IE--- 256 (374)
Q Consensus 183 ~~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~---L~--- 256 (374)
...+|+|.|+|||||++.|+++|+++|+||.++..++.+|++.-...+..++.. ...+.|++.|... +.
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~-----~~~~~l~~~l~~~~~~~~~~~ 85 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADV-----ADGPALRHDVEAAIRKVGLDV 85 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHH-----HTSHHHHHHHHHHHHHTTCEE
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCc-----CCHHHHHHHHHHHHHHcCeEE
Confidence 457899999999999999999999999999999999988988766666543211 0125666666543 21
Q ss_pred --h------ccC--CceEEEEEeCC-CccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEE
Q 017268 257 --R------RAS--EGLELELCTED-RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309 (374)
Q Consensus 257 --~------r~~--~~tvieV~~~D-RpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~ 309 (374)
. +.+ .+..+++.+.| +||++.+|+.+|+++|+||..+..-+......-.|++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~llg~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~~~v~ 149 (415)
T 3p96_A 86 SIERSDDVPIIREPSTHTIFVLGRPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLELRVS 149 (415)
T ss_dssp EEEECSSSCSSCCCCSEEEEEEESSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEEEEEE
T ss_pred EEEECCcccccCCCCcEEEEEEeCCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEEEEee
Confidence 0 011 25899999999 99999999999999999999988877433333346664
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.85 E-value=2.4e-08 Score=99.06 Aligned_cols=140 Identities=13% Similarity=0.047 Sum_probs=96.4
Q ss_pred CeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHcCCCcc
Q 017268 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDF 127 (374)
Q Consensus 48 ~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~~~ 127 (374)
....|+|.|+||||+.+.|+++|+++|+||.+++.++.++.+.....+.-+ +.. ...+.|++.|.. +..+..
T Consensus 11 ~~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~--~~~----~~~~~l~~~l~~-~~~~~~- 82 (415)
T 3p96_A 11 VSVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCP--ADV----ADGPALRHDVEA-AIRKVG- 82 (415)
T ss_dssp EEEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEEC--HHH----HTSHHHHHHHHH-HHHHTT-
T ss_pred CeEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEec--CCc----CCHHHHHHHHHH-HHHHcC-
Confidence 467899999999999999999999999999999999988887766555431 110 012567887776 433332
Q ss_pred cccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeCC-CcchHHHHHHHHH
Q 017268 128 RKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKD-RPKLLFDIVCTLT 206 (374)
Q Consensus 128 ~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~D-rpGLl~~i~~~l~ 206 (374)
+. .+++. .. ..+.+ ....+..+++.++| ++|++.+++.+++
T Consensus 83 ------~~--------~~~~~-------~~-------------~~~~~----~~~~~~~~~llg~~~~~~~~~~i~~~l~ 124 (415)
T 3p96_A 83 ------LD--------VSIER-------SD-------------DVPII----REPSTHTIFVLGRPITAAAFGAVAREVA 124 (415)
T ss_dssp ------CE--------EEEEE-------CS-------------SSCSS----CCCCSEEEEEEESSCCHHHHHHHHHHHH
T ss_pred ------eE--------EEEEE-------CC-------------ccccc----CCCCcEEEEEEeCCCCHHHHHHHHHHHH
Confidence 10 01110 00 00000 12356779999999 9999999999999
Q ss_pred hCCceEEEEEEEecCCeEEEEEEEEeC
Q 017268 207 DMQYVVFHGMVNTGRTEAYQEFYIRHV 233 (374)
Q Consensus 207 ~~glnI~~A~i~T~~g~~~dvF~V~~~ 233 (374)
.+|+||.+....+....+.--|+|..+
T Consensus 125 ~~~~Ni~~l~~~~~~~~~~~~~~v~~~ 151 (415)
T 3p96_A 125 ALGVNIDLIRGVSDYPVIGLELRVSVP 151 (415)
T ss_dssp HTTCEEEEEEEEESSSSEEEEEEEECC
T ss_pred HcCCCccceeeccCCCceEEEEEeeCC
Confidence 999999988887743333333666544
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.76 E-value=2.1e-07 Score=78.88 Aligned_cols=112 Identities=5% Similarity=-0.000 Sum_probs=76.7
Q ss_pred EEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhhccCCceE
Q 017268 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLE 264 (374)
Q Consensus 185 t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~r~~~~tv 264 (374)
..++|..+|+||.++++++.|++.|+||....+....+...-.|.+.+ . ++.++.|... ........+
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~d--------~---~~a~~~L~~~-G~~v~~~sv 74 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVSD--------P---DKAYKALKDN-HFAVNITDV 74 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEESC--------H---HHHHHHHHHT-TCCEEEEEE
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeCC--------H---HHHHHHHHHc-CCeEeeeeE
Confidence 568889999999999999999999999998877643332222243221 2 2233334321 111111247
Q ss_pred EEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEE
Q 017268 265 LELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYV 308 (374)
Q Consensus 265 ieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv 308 (374)
+-+..+|+||.+++++++|++.|+||.+......+.+..-+|.+
T Consensus 75 v~v~~~d~pGvla~i~~~L~~~~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 75 VGISCPNVPGALAKVLGFLSAEGVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp EEEEEESSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEE
T ss_pred EEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEEccCCcEEEEEEe
Confidence 88888999999999999999999999887765334555545544
No 8
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.28 E-value=4e-05 Score=64.67 Aligned_cols=113 Identities=16% Similarity=0.103 Sum_probs=75.8
Q ss_pred eEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHcCCCccc
Q 017268 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYDDFR 128 (374)
Q Consensus 49 ~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~~~~ 128 (374)
...|+|..+|+||.+++|+++|+++|+||..-.+....+.-...|.+. ++ ++.++.|.+ .|..
T Consensus 6 ~~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~~~~~~~~---------d~---~~a~~~L~~--~G~~--- 68 (144)
T 2f06_A 6 AKQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFGILRGIVS---------DP---DKAYKALKD--NHFA--- 68 (144)
T ss_dssp EEEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEES---------CH---HHHHHHHHH--TTCC---
T ss_pred EEEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCCEEEEEeC---------CH---HHHHHHHHH--cCCe---
Confidence 357899999999999999999999999999877764433212223321 22 233444443 1210
Q ss_pred ccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeCCCcchHHHHHHHHHhC
Q 017268 129 KAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKDRPKLLFDIVCTLTDM 208 (374)
Q Consensus 129 ~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~DrpGLl~~i~~~l~~~ 208 (374)
. . ...++.+..+|+||.+++++++|+++
T Consensus 69 -----v---------------------~--------------------------~~svv~v~~~d~pGvla~i~~~L~~~ 96 (144)
T 2f06_A 69 -----V---------------------N--------------------------ITDVVGISCPNVPGALAKVLGFLSAE 96 (144)
T ss_dssp -----E---------------------E--------------------------EEEEEEEEEESSTTHHHHHHHHHHHT
T ss_pred -----E---------------------e--------------------------eeeEEEEEeCCCCcHHHHHHHHHHHC
Confidence 0 0 02346778899999999999999999
Q ss_pred CceEEEEEEEecCCeEEEEEEE
Q 017268 209 QYVVFHGMVNTGRTEAYQEFYI 230 (374)
Q Consensus 209 glnI~~A~i~T~~g~~~dvF~V 230 (374)
|+||.....+..++...-+|.+
T Consensus 97 ~InI~~~~~~~~~~~~~~~i~~ 118 (144)
T 2f06_A 97 GVFIEYMYSFANNNVANVVIRP 118 (144)
T ss_dssp TCCEEEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEEEEccCCcEEEEEEe
Confidence 9999876665334455444444
No 9
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.21 E-value=1.2e-05 Score=62.25 Aligned_cols=64 Identities=9% Similarity=0.017 Sum_probs=50.8
Q ss_pred EEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 017268 184 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 253 (374)
Q Consensus 184 ~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~ 253 (374)
...++|.++||||++++++++|+++|+||.+....+.++.+.-.+.+..++.. .++.|.+.|..
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~~~~------~l~~l~~~L~~ 68 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQ------DFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCC------CHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeCCCC------CHHHHHHHHHH
Confidence 46799999999999999999999999999999999877877777777554311 34556666554
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.19 E-value=9.4e-06 Score=62.86 Aligned_cols=65 Identities=14% Similarity=0.221 Sum_probs=51.6
Q ss_pred CeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 017268 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119 (374)
Q Consensus 48 ~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~ 119 (374)
....|+|.++||||++++|+++|+++|+||.+....+..+.+...+.+.-+ +. ..++.|.+.|.+
T Consensus 4 ~~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~--~~-----~~l~~l~~~L~~ 68 (91)
T 1zpv_A 4 MKAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSD--EK-----QDFTYLRNEFEA 68 (91)
T ss_dssp EEEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEES--SC-----CCHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeC--CC-----CCHHHHHHHHHH
Confidence 457899999999999999999999999999999999887766666666432 21 124677777776
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=98.00 E-value=3.2e-05 Score=59.11 Aligned_cols=64 Identities=11% Similarity=0.214 Sum_probs=50.6
Q ss_pred ceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEcCCCCCCChhHHHHHHHHHhh
Q 017268 262 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 330 (374)
Q Consensus 262 ~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d~~g~~l~~~~~~~l~~~l~~ 330 (374)
.+.|.|.+.||||+|++|+++|++.|+||.++.+.+.++.+...|.+.-. +...++++.++|..
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~~~-----~~~~l~~l~~~L~~ 68 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIFVK-----NTDKLTTLMDKLRK 68 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEEES-----SHHHHHHHHHHHTT
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEEEC-----CHHHHHHHHHHHhc
Confidence 36789999999999999999999999999999998876655555555332 23567777777764
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.77 E-value=0.00013 Score=55.73 Aligned_cols=48 Identities=13% Similarity=0.287 Sum_probs=40.2
Q ss_pred eEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEEe
Q 017268 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 96 (374)
Q Consensus 49 ~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V~ 96 (374)
.+.|.|.++||||++++|+++|+++|+||.+..+.+.++.+...|.+.
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~~~~~~~~~i~v~ 52 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNAKDGIFTCNLMIF 52 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEECSSEEEEEEEEE
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEEcCCEEEEEEEEE
Confidence 467899999999999999999999999999999988766444555554
No 13
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.74 E-value=0.00023 Score=61.69 Aligned_cols=114 Identities=18% Similarity=0.257 Sum_probs=77.0
Q ss_pred CEEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEe-cCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHH---Hhh
Q 017268 183 DYTVITMR-SKDRPKLLFDIVCTLTDMQYVVFHGMVNT-GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA---IER 257 (374)
Q Consensus 183 ~~t~v~V~-~~DrpGLl~~i~~~l~~~glnI~~A~i~T-~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~---L~~ 257 (374)
+...|+|. .+|+||.++++..+|+++|+||..-.... .+|...-.|.|...+ .++..+.|.+. +..
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~~---------~~~a~~~l~~~~~~l~~ 94 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRGD---------YKQTLEILSERQDSIGA 94 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGGG---------HHHHHHHHHHSSTTTTC
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEechH---------HHHHHHHHHHHHHHcCC
Confidence 56778888 59999999999999999999998765542 234445557775421 12233334332 111
Q ss_pred c----cCCceEEEEEeCC---CccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEE
Q 017268 258 R----ASEGLELELCTED---RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVT 309 (374)
Q Consensus 258 r----~~~~tvieV~~~D---RpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~ 309 (374)
. ...-..+.|.+.+ +||+++++.++|++.||||... +|. ...-.|.|.
T Consensus 95 ~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~i--sts--e~~is~vv~ 149 (167)
T 2re1_A 95 ASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQMI--STS--EIKVSVLID 149 (167)
T ss_dssp SEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCEE--EEC--SSEEEEEEE
T ss_pred ceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEEE--Ecc--cCEEEEEEe
Confidence 0 1234789999887 9999999999999999999984 342 233445553
No 14
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.73 E-value=0.0013 Score=62.18 Aligned_cols=110 Identities=12% Similarity=0.115 Sum_probs=75.1
Q ss_pred CEEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh---
Q 017268 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT--GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER--- 257 (374)
Q Consensus 183 ~~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T--~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~--- 257 (374)
...++++.|+|||||++.|++.|+++|+||.+++.++ ..|.+.-...+.-+.+. . ..++|++.|...-.+
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~-~----~~~~L~~~f~~la~~~~m 79 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKV-I----PLASLRTGFGVIAAKFTM 79 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCC-C----CHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCC-C----CHHHHHHHHHHHHHHcCC
Confidence 3467999999999999999999999999999999985 35777666656544321 1 245666666543111
Q ss_pred -----ccCCceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEee
Q 017268 258 -----RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297 (374)
Q Consensus 258 -----r~~~~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T 297 (374)
...+...|-|-+--+---|.+|......-.++++-+-+-+
T Consensus 80 ~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 124 (288)
T 3obi_A 80 GWHMRDRETRRKVMLLVSQSDHCLADILYRWRVGDLHMIPTAIVS 124 (288)
T ss_dssp EEEEEETTSCEEEEEEECSCCHHHHHHHHHHHTTSSCEEEEEEEE
T ss_pred EEEeeccCCCcEEEEEEcCCCCCHHHHHHHHHCCCCCeEEEEEEc
Confidence 0223445666666666788888888877767655444443
No 15
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.70 E-value=0.0008 Score=63.98 Aligned_cols=110 Identities=9% Similarity=0.067 Sum_probs=70.7
Q ss_pred CEEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHH---Hhh
Q 017268 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG--RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAA---IER 257 (374)
Q Consensus 183 ~~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~--~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~---L~~ 257 (374)
...++++.|+|||||++.|++.|+++|+||.++..++. .|++.-...+..+.+. . ..+.|++.|... +.-
T Consensus 21 ~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~~-~----~~~~L~~~l~~la~~l~m 95 (302)
T 3o1l_A 21 RTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTLP-F----DLDGFREAFTPIAEEFSM 95 (302)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGSS-S----CHHHHHHHHHHHHHHHTC
T ss_pred ceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCCC-C----CHHHHHHHHHHHHHHhCC
Confidence 45789999999999999999999999999999999975 5777655555543221 1 245666666432 210
Q ss_pred ----c-cCCceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEee
Q 017268 258 ----R-ASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297 (374)
Q Consensus 258 ----r-~~~~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T 297 (374)
+ ..+...|-|-+--+-.-|.++......-.++.+-+-+-+
T Consensus 96 ~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Vis 140 (302)
T 3o1l_A 96 DWRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVIS 140 (302)
T ss_dssp EEEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEE
T ss_pred eeeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEE
Confidence 0 122333444444444577777777766555444344433
No 16
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.58 E-value=0.0017 Score=61.33 Aligned_cols=108 Identities=10% Similarity=0.027 Sum_probs=70.0
Q ss_pred EEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh----
Q 017268 184 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT--GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER---- 257 (374)
Q Consensus 184 ~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T--~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~---- 257 (374)
..+++|.|+|||||++.|++.|+++|+||.+++.++ ..|++.-...+..+.+ . ..++|++.|...-.+
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~--~----~~~~L~~~f~~la~~l~m~ 81 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPDD--F----DEAGFRAGLAERSEAFGMA 81 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCSS--C----CHHHHHHHHHHHHGGGTCE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCCC--C----CHHHHHHHHHHHHHHcCCE
Confidence 467999999999999999999999999999999996 3566655555544321 1 246677776543211
Q ss_pred ----ccCCceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEee
Q 017268 258 ----RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297 (374)
Q Consensus 258 ----r~~~~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T 297 (374)
...+...|-|-+--+---|.++......-.++.+-+-+-+
T Consensus 82 ~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis 125 (286)
T 3n0v_A 82 FELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVS 125 (286)
T ss_dssp EEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEE
T ss_pred EEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEe
Confidence 0122334444444444577777777766555444444433
No 17
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.52 E-value=0.0022 Score=60.70 Aligned_cols=111 Identities=11% Similarity=0.066 Sum_probs=69.6
Q ss_pred CEEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEEeCC-CCCCCCHHHHHHHHHHHHHH---Hh
Q 017268 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT--GRTEAYQEFYIRHVD-GLPISSEAERERVIQCLEAA---IE 256 (374)
Q Consensus 183 ~~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T--~~g~~~dvF~V~~~~-g~~~~~~~~~~~L~~~L~~~---L~ 256 (374)
...++++.|+|||||+++|++.|+++|+||.+++.++ ..|++.-...+..+. +... ..+.|++.|... +.
T Consensus 9 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~----~~~~L~~~f~~la~~~~ 84 (292)
T 3lou_A 9 HQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADAL----RVDALRREFEPIAERFR 84 (292)
T ss_dssp CEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----C----CHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCC----CHHHHHHHHHHHHHhcC
Confidence 3567999999999999999999999999999999996 457665555444330 1011 245666666432 21
Q ss_pred h-----ccCCceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEee
Q 017268 257 R-----RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297 (374)
Q Consensus 257 ~-----r~~~~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T 297 (374)
- ...+...|-|-+--+---|.+|......-.++++-+-+-+
T Consensus 85 m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis 130 (292)
T 3lou_A 85 MQWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVS 130 (292)
T ss_dssp CEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEE
T ss_pred cEEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEe
Confidence 0 0122333444444444578888887776655544444443
No 18
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.50 E-value=0.00042 Score=65.90 Aligned_cols=67 Identities=13% Similarity=0.136 Sum_probs=49.8
Q ss_pred CCeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEee--CCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 017268 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119 (374)
Q Consensus 47 ~~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~--~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~ 119 (374)
.....|+|.|+||||+.++|+++|+++|+||.+++.++. ++.+.....+..+ +... ..+.|++.|..
T Consensus 20 ~~~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~--~~~~----~~~~L~~~l~~ 88 (302)
T 3o1l_A 20 MRTFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRAD--TLPF----DLDGFREAFTP 88 (302)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGG--GSSS----CHHHHHHHHHH
T ss_pred cceEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecC--CCCC----CHHHHHHHHHH
Confidence 345789999999999999999999999999999999985 4565554444331 1112 23667777765
No 19
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.49 E-value=0.0032 Score=59.42 Aligned_cols=108 Identities=9% Similarity=0.118 Sum_probs=70.5
Q ss_pred CEEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEe--cCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh---
Q 017268 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNT--GRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER--- 257 (374)
Q Consensus 183 ~~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T--~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~--- 257 (374)
...++++.|+|||||++.|++.|+++|+||.+++.++ ..|++.-...+..+.. ..+.|++.|...-.+
T Consensus 6 ~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~-------~~~~L~~~f~~la~~~~m 78 (287)
T 3nrb_A 6 NQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPVA-------GVNDFNSAFGKVVEKYNA 78 (287)
T ss_dssp TEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC----------CHHHHHHHHHHGGGTC
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCCC-------CHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999999999999999985 3576665544443211 133666666543211
Q ss_pred -----ccCCceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEee
Q 017268 258 -----RASEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEIST 297 (374)
Q Consensus 258 -----r~~~~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T 297 (374)
...+...|-|-+--+-.-|.+|......-.++++-+-+-+
T Consensus 79 ~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~i~~Vis 123 (287)
T 3nrb_A 79 EWWFRPRTDRKKVVIMVSKFDHCLGDLLYRHRLGELDMEVVGIIS 123 (287)
T ss_dssp EEEEEETTCCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEE
T ss_pred eeEeeccCCCcEEEEEEeCCCcCHHHHHHHHHCCCCCeEEEEEEe
Confidence 0122344555555555688888888877666554444433
No 20
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.39 E-value=0.00066 Score=64.17 Aligned_cols=66 Identities=17% Similarity=0.221 Sum_probs=48.7
Q ss_pred CeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEee--CCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 017268 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119 (374)
Q Consensus 48 ~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~--~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~ 119 (374)
....|+|.|+||||+.++|+++|+++|+||.+.+.++. .+.+.....+.-+ +... + .+.|++.|..
T Consensus 5 ~~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~--~~~~-~---~~~L~~~f~~ 72 (288)
T 3obi_A 5 HQYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAA--AKVI-P---LASLRTGFGV 72 (288)
T ss_dssp CEEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEES--SCCC-C---HHHHHHHHHH
T ss_pred CeEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcC--CCCC-C---HHHHHHHHHH
Confidence 34689999999999999999999999999999999863 4555544444332 2112 2 3677887766
No 21
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.35 E-value=0.0015 Score=57.10 Aligned_cols=131 Identities=13% Similarity=0.156 Sum_probs=83.7
Q ss_pred CCEEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 017268 182 KDYTVITMR-SKDRPKLLFDIVCTLTDMQYVVFHGMVNTG---RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257 (374)
Q Consensus 182 ~~~t~v~V~-~~DrpGLl~~i~~~l~~~glnI~~A~i~T~---~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~ 257 (374)
.+.+.|+|. .+|+||.++++...|++.|+||......+. ++...-.|.+... ..++..+.|.+....
T Consensus 13 ~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~---------d~~~a~~~l~~~~~~ 83 (178)
T 2dtj_A 13 KSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRS---------DGRRAMEILKKLQVQ 83 (178)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHH---------HHHHHHHHHHTTTTT
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccc---------cHHHHHHHHHHHHHh
Confidence 356778884 699999999999999999999987666544 3333223666542 223334444431111
Q ss_pred ---c----cCCceEEEEEeC---CCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEcCCCCCCChhHHHHHHHH
Q 017268 258 ---R----ASEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQ 327 (374)
Q Consensus 258 ---r----~~~~tvieV~~~---DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d~~g~~l~~~~~~~l~~~ 327 (374)
. .+.-.+|.|.+. ++||+++++.++|++.||||... +|.. ..-.|.|...+ ..+.++.|.++
T Consensus 84 ~~~~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~i--stSe--~~Is~vV~~~d----~~~Av~~Lh~~ 155 (178)
T 2dtj_A 84 GNWTNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI--STSE--IRISVLIREDD----LDAAARALHEQ 155 (178)
T ss_dssp TTCSEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEE--EEET--TEEEEEEEGGG----HHHHHHHHHHH
T ss_pred cCCCeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEEE--EcCC--CeEEEEEeHHH----HHHHHHHHHHH
Confidence 1 123467788776 89999999999999999999984 3432 33456563221 01345556666
Q ss_pred Hh
Q 017268 328 IG 329 (374)
Q Consensus 328 l~ 329 (374)
|.
T Consensus 156 F~ 157 (178)
T 2dtj_A 156 FQ 157 (178)
T ss_dssp HT
T ss_pred Hc
Confidence 64
No 22
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.32 E-value=0.00071 Score=63.88 Aligned_cols=68 Identities=12% Similarity=0.076 Sum_probs=50.0
Q ss_pred CeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEee--CCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 017268 48 EHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 123 (374)
Q Consensus 48 ~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~--~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~ 123 (374)
....|+|.|+||||+.++|++.|+++|+||.+.+.++. .+.+.....+..+ + .. ..+.|++.|.. +..
T Consensus 7 ~~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~--~-~~----~~~~L~~~f~~-la~ 76 (286)
T 3n0v_A 7 DTWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQP--D-DF----DEAGFRAGLAE-RSE 76 (286)
T ss_dssp CCEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECC--S-SC----CHHHHHHHHHH-HHG
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecC--C-CC----CHHHHHHHHHH-HHH
Confidence 45789999999999999999999999999999999963 4555544334321 1 12 23678888876 443
No 23
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.31 E-value=0.014 Score=50.25 Aligned_cols=114 Identities=12% Similarity=0.063 Sum_probs=75.8
Q ss_pred ecCCCCeEEEEEE-eCCccchHHHHHHHHHhcCCeEEEEEEEee-CCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHH
Q 017268 43 VMPTEEHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTH-NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNV 120 (374)
Q Consensus 43 ~~~~~~~~~I~I~-~~DrpGL~a~I~~vL~~~glnI~~A~I~T~-~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~ 120 (374)
.....+...|+|. .+|+||.+++|..+|+.+|+||.--..... ++.....|.|... +. ++..+.|.+
T Consensus 19 Ia~~~~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~-------~~---~~a~~~l~~- 87 (167)
T 2re1_A 19 IAFDKNQARINVRGVPDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG-------DY---KQTLEILSE- 87 (167)
T ss_dssp EEEECCCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG-------GH---HHHHHHHHH-
T ss_pred EEecCCEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech-------HH---HHHHHHHHH-
Confidence 3555677788888 499999999999999999999986544322 2233456777431 11 233344444
Q ss_pred HcCCCcccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeCC---Ccch
Q 017268 121 LRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKD---RPKL 197 (374)
Q Consensus 121 L~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~D---rpGL 197 (374)
+..+.. + ..|.+ ..+...+.|.+.+ +||+
T Consensus 88 ~~~~l~-------~--------------------------------------~~i~~---~~~~a~vsvvG~~m~~~~Gv 119 (167)
T 2re1_A 88 RQDSIG-------A--------------------------------------ASIDG---DDTVCKVSAVGLGMRSHVGV 119 (167)
T ss_dssp SSTTTT-------C--------------------------------------SEEEE---ESSEEEEEEECSSCTTCCCH
T ss_pred HHHHcC-------C--------------------------------------ceEEe---cCCEEEEEEECCCcCCCcCH
Confidence 222111 0 11222 2357788998876 9999
Q ss_pred HHHHHHHHHhCCceEEEE
Q 017268 198 LFDIVCTLTDMQYVVFHG 215 (374)
Q Consensus 198 l~~i~~~l~~~glnI~~A 215 (374)
++++..+|++.|+||...
T Consensus 120 ~a~i~~aL~~~~InI~~i 137 (167)
T 2re1_A 120 AAKIFRTLAEEGINIQMI 137 (167)
T ss_dssp HHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHCCCcEEEE
Confidence 999999999999999873
No 24
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.25 E-value=0.00085 Score=63.52 Aligned_cols=69 Identities=12% Similarity=0.200 Sum_probs=47.8
Q ss_pred CCeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEee--CCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 017268 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119 (374)
Q Consensus 47 ~~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~--~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~ 119 (374)
.....|++.|+||||+.++|+++|+++|+||.+++.++. .+.+.....+..+..+... ..+.|++.|..
T Consensus 8 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~~~----~~~~L~~~f~~ 78 (292)
T 3lou_A 8 PHQFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATDDADAL----RVDALRREFEP 78 (292)
T ss_dssp CCEEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC----C----CHHHHHHHHHH
T ss_pred CCcEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccCcccCC----CHHHHHHHHHH
Confidence 345789999999999999999999999999999999963 4555443333221001111 23677777765
No 25
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.22 E-value=0.0021 Score=55.50 Aligned_cols=119 Identities=11% Similarity=0.095 Sum_probs=77.0
Q ss_pred CCEEEEEEEe-CCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 017268 182 KDYTVITMRS-KDRPKLLFDIVCTLTDMQYVVFHGMVNTG---RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257 (374)
Q Consensus 182 ~~~t~v~V~~-~DrpGLl~~i~~~l~~~glnI~~A~i~T~---~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~ 257 (374)
.+...|++.+ +|+||.++++..+|++.|+||..-..... .|...-.|.|...+. .+..++-+.+...+..
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~d~------~~a~~~L~~~~~~~~~ 87 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKDFA------QEALEALEPVLAEIGG 87 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGGGH------HHHHHHHHHHHHHHCC
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehHHH------HHHHHHHHHHHHHhCC
Confidence 3567778776 89999999999999999999987544322 234455677765321 1222222223222321
Q ss_pred c---cCCceEEEEEeCC---CccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEc
Q 017268 258 R---ASEGLELELCTED---RVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310 (374)
Q Consensus 258 r---~~~~tvieV~~~D---RpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d 310 (374)
. .+.-..+.|.+.+ +||+++++.++|++.||||... +|. ...-.|.|..
T Consensus 88 ~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i--s~S--e~~is~vv~~ 142 (167)
T 2dt9_A 88 EAILRPDIAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI--ATS--EVRISVIIPA 142 (167)
T ss_dssp EEEEECSEEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE--EEC--SSEEEEEEEG
T ss_pred cEEEeCCEEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE--Ecc--CCEEEEEEeH
Confidence 1 1234668888886 9999999999999999999544 343 2244565644
No 26
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.08 E-value=0.0012 Score=62.43 Aligned_cols=65 Identities=20% Similarity=0.252 Sum_probs=47.1
Q ss_pred CCeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEee--CCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 017268 47 EEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119 (374)
Q Consensus 47 ~~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~--~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~ 119 (374)
.....|++.|+||||+.++|+++|+++|+||.+++.++. ++.+.....+.. .+. .++.|++.|..
T Consensus 5 ~~~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~--~~~------~~~~L~~~f~~ 71 (287)
T 3nrb_A 5 NNQYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEI--PVA------GVNDFNSAFGK 71 (287)
T ss_dssp TTEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEEC--CC---------CHHHHHHHH
T ss_pred CCeEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEc--CCC------CHHHHHHHHHH
Confidence 456789999999999999999999999999999999863 445544333322 111 12467777765
No 27
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=97.06 E-value=0.047 Score=47.47 Aligned_cols=113 Identities=13% Similarity=0.147 Sum_probs=73.9
Q ss_pred cCCCCeEEEEEE-eCCccchHHHHHHHHHhcCCeEEEEEEEee---CCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 017268 44 MPTEEHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTH---NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119 (374)
Q Consensus 44 ~~~~~~~~I~I~-~~DrpGL~a~I~~vL~~~glnI~~A~I~T~---~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~ 119 (374)
....+.+.|+|. .+|+||.+++|...|+++|+||.--...+. ++.....|.+... ..++..+.|.+
T Consensus 10 a~~~~~~~Itv~~~~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~~----------d~~~a~~~l~~ 79 (178)
T 2dtj_A 10 ATDKSEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPRS----------DGRRAMEILKK 79 (178)
T ss_dssp EEECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEHH----------HHHHHHHHHHT
T ss_pred EecCCEEEEEEecCCCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEccc----------cHHHHHHHHHH
Confidence 455677778884 699999999999999999999985544433 2233345666431 11233333433
Q ss_pred HHcCCCcccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeC---CCcc
Q 017268 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPK 196 (374)
Q Consensus 120 ~L~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~---DrpG 196 (374)
+..+.. + ..+.+ ..+...|.|.+. +.||
T Consensus 80 -~~~~~~-----------------------------~----------------~~v~~---~~~~a~VsvVG~gm~~~~G 110 (178)
T 2dtj_A 80 -LQVQGN-----------------------------W----------------TNVLY---DDQVGKVSLVGAGMKSHPG 110 (178)
T ss_dssp -TTTTTT-----------------------------C----------------SEEEE---ESCEEEEEEEEECCTTCHH
T ss_pred -HHHhcC-----------------------------C----------------CeEEE---eCCeEEEEEEcCCcccCcc
Confidence 221110 0 11222 124667788775 8999
Q ss_pred hHHHHHHHHHhCCceEEEE
Q 017268 197 LLFDIVCTLTDMQYVVFHG 215 (374)
Q Consensus 197 Ll~~i~~~l~~~glnI~~A 215 (374)
+++++..+|++.|+||..-
T Consensus 111 v~arif~aLa~~~InI~~i 129 (178)
T 2dtj_A 111 VTAEFMEALRDVNVNIELI 129 (178)
T ss_dssp HHHHHHHHHHHTTCCCCEE
T ss_pred HHHHHHHHHHHCCCCEEEE
Confidence 9999999999999999873
No 28
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.03 E-value=0.0021 Score=55.67 Aligned_cols=62 Identities=18% Similarity=0.304 Sum_probs=49.8
Q ss_pred eEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecC--CeeeeEEEEEcCCCCCCChhHHHHHHHHHhh
Q 017268 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG--GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 330 (374)
Q Consensus 263 tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g--~~~~D~Fyv~d~~g~~l~~~~~~~l~~~l~~ 330 (374)
+.|+|.+.||||+|++|+.+|+++|+||.++.+.+.. +...-+|-+. . . +..+++|..+|.+
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~-~--d---~~~leqI~kqL~K 67 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV-G--D---EKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE-S--C---HHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe-c--c---HHHHHHHHHHHcC
Confidence 5789999999999999999999999999999997543 3455566664 2 1 4678888888775
No 29
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=96.85 E-value=0.004 Score=53.89 Aligned_cols=63 Identities=16% Similarity=0.249 Sum_probs=49.0
Q ss_pred eEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeCC-eeE-EEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 017268 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHND-RAA-AVVHVTDHSTGYAIKDPKRLSTIKELLFN 119 (374)
Q Consensus 49 ~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~-~~~-dvf~V~~~~~g~~~~~~~~~~~l~~~L~~ 119 (374)
...|.|.+.|+||+|++|+++|+..|+||.+..+.+..+ +.. ..|.|.. +...++.|.+.|.+
T Consensus 3 ~~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~--------d~~~leqI~kqL~K 67 (164)
T 2f1f_A 3 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG--------DEKVLEQIEKQLHK 67 (164)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES--------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec--------cHHHHHHHHHHHcC
Confidence 357899999999999999999999999999999987653 444 4565642 13566777777776
No 30
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.84 E-value=0.24 Score=51.32 Aligned_cols=217 Identities=13% Similarity=0.157 Sum_probs=130.2
Q ss_pred CCCeEEEEEEeC---CccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHc
Q 017268 46 TEEHTSIEFTGT---DRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 122 (374)
Q Consensus 46 ~~~~~~I~I~~~---DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~L~ 122 (374)
..+...|.|++. .+||..+++..+|+.+|+||.--. | . ..-..|.|... ..++.-+.|++.+.
T Consensus 352 ~~~~a~VsvVG~gm~~~~Gv~a~if~aL~~~~Ini~~is--t-S-e~~Is~vI~~~----------d~~~Av~aLh~~f~ 417 (600)
T 3l76_A 352 EKGIAKIAIAGAGMIGRPGIAAKMFKTLADVGVNIEMIS--T-S-EVKVSCVIDQR----------DADRAIAALSNAFG 417 (600)
T ss_dssp ECSEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCCCEEE--E-C-SSEEEEEEEGG----------GHHHHHHHHHHHTT
T ss_pred cCCeEEEEEECCCcccCccHHHHHHHHHHhCCCcEEEEe--c-C-CCEEEEEEcHH----------HHHHHHHHHHHhhc
Confidence 466788999976 689999999999999999997543 2 2 33455666431 12344566777665
Q ss_pred CCCcccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEE-eCCCcchHHHH
Q 017268 123 GYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMR-SKDRPKLLFDI 201 (374)
Q Consensus 123 ~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~-~~DrpGLl~~i 201 (374)
.+.. . + . .+ . ...+ . ..-.-|..+ .+...|++. .+|+||+.+++
T Consensus 418 ~~~t-~-~---~---------~~-~------~~~~----------~-~~v~Gia~~---~~~a~i~i~~~~~~~g~~~~i 462 (600)
T 3l76_A 418 VTLS-P-P---K---------NQ-T------DTSH----------L-PAVRGVALD---QDQAQIAIRHVPDRPGMAAQL 462 (600)
T ss_dssp CCBC-C-C---C---------CC-C------C-------------C-CSCCEEEEE---CSEEEEEEEEEESSTTHHHHH
T ss_pred ccCC-C-c---c---------cc-c------cccc----------c-CceEEEEee---CCEEEEEEecCCCCccHHHHH
Confidence 4211 0 0 0 00 0 0000 0 011234443 356667775 59999999999
Q ss_pred HHHHHhCCceEEEEEEEec----CC--eEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhhcc--------CCceEEEE
Q 017268 202 VCTLTDMQYVVFHGMVNTG----RT--EAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA--------SEGLELEL 267 (374)
Q Consensus 202 ~~~l~~~glnI~~A~i~T~----~g--~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~r~--------~~~tvieV 267 (374)
.+.|++.|+||.--..... +| ..--.|.|.. +..++..+.|++. .... +.-..|.|
T Consensus 463 f~~La~~~I~vDmI~q~~~~~~~~g~~~~~isftv~~---------~d~~~a~~~l~~~-~~~~~~~~v~~~~~~akVSi 532 (600)
T 3l76_A 463 FTALAEANISVDMIIQSQRCRINQGTPCRDIAFMVAE---------GDSSQAEAILQPL-IKDWLDAAIVVNKAIAKVSI 532 (600)
T ss_dssp HHHHHHTTCCCCEEEEEEECCCSSSSCEEEEEEEEEH---------HHHHHHHHHHHHH-TTTSTTCEEEEECCEEEEEE
T ss_pred HHHHHHcCCcEEEEEecccccccCCCccceEEEEEeH---------HHHHHHHHHHHHH-HHhcCCceEEEeCCeEEEEE
Confidence 9999999999964444432 24 2334466654 2334444444442 1111 23467888
Q ss_pred Ee---CCCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEcCCCCCCChhHHHHHHHHHh
Q 017268 268 CT---EDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 329 (374)
Q Consensus 268 ~~---~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d~~g~~l~~~~~~~l~~~l~ 329 (374)
.+ ..+||+.+++.++|++.||||.... |. ...-.+.|...+. ++.+..|.++|.
T Consensus 533 VG~GM~~~~Gvaa~~f~aL~~~~Ini~mis--tS--Ei~Is~vV~~~~~----~~Av~alh~~F~ 589 (600)
T 3l76_A 533 VGSGMIGHPGVAAHFFAALAQENINIEMIA--TS--EIKISCVVPQDRG----VDALKAAHSAFN 589 (600)
T ss_dssp ECGGGTTCTTHHHHHHHHHHTTTCCCCEEE--EC--SSEEEEEEEGGGH----HHHHHHHHHHTT
T ss_pred ECcccccCccHHHHHHHHHHHCCCceEEEE--cC--CceEEEEEeHHHH----HHHHHHHHHHhC
Confidence 76 5999999999999999999998766 32 2333455533311 134455555553
No 31
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.80 E-value=0.0038 Score=54.07 Aligned_cols=62 Identities=18% Similarity=0.323 Sum_probs=49.6
Q ss_pred eEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecC--CeeeeEEEEEcCCCCCCChhHHHHHHHHHhh
Q 017268 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG--GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 330 (374)
Q Consensus 263 tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g--~~~~D~Fyv~d~~g~~l~~~~~~~l~~~l~~ 330 (374)
..|.|...|+||+|++|+.+|+++|+||.++.+.+.. +...-+|-+... +..+++|..+|.+
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~d------~~~leql~kQL~K 68 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNGP------DEIVEQITKQLNK 68 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEEC------HHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEecc------HHHHHHHHHHhcC
Confidence 5789999999999999999999999999999997543 445556666422 4677888888775
No 32
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.72 E-value=0.23 Score=51.43 Aligned_cols=185 Identities=16% Similarity=0.180 Sum_probs=110.7
Q ss_pred CeEEEEEE-eCCccchHHHHHHHHHhcCCeEEEEEEEe-eCCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHcCCC
Q 017268 48 EHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWT-HNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGYD 125 (374)
Q Consensus 48 ~~~~I~I~-~~DrpGL~a~I~~vL~~~glnI~~A~I~T-~~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~~ 125 (374)
+.+.|+|. .+|.||.+++|...|+.+|+||.--.... .++.....|.|... + .++..+.|.+ +..+.
T Consensus 269 ~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~-------~---~~~a~~~l~~-~~~el 337 (600)
T 3l76_A 269 DQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKD-------L---LNTAEAVTSA-IAPAL 337 (600)
T ss_dssp CCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGG-------G---HHHHHHHHHH-HGGGG
T ss_pred CEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHH-------H---HHHHHHHHHH-HHHHh
Confidence 33445554 47899999999999999999994221111 12333456777541 1 1223333333 22211
Q ss_pred cccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeC---CCcchHHHHH
Q 017268 126 DFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPKLLFDIV 202 (374)
Q Consensus 126 ~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~---DrpGLl~~i~ 202 (374)
. .+.. . .....|.+. .+...|.|++. .+||+.+++.
T Consensus 338 ~-----------------~~~~-------~--------------~~~~~v~~~---~~~a~VsvVG~gm~~~~Gv~a~if 376 (600)
T 3l76_A 338 R-----------------SYPE-------A--------------DQEAEIIVE---KGIAKIAIAGAGMIGRPGIAAKMF 376 (600)
T ss_dssp S-----------------SSTT-------C--------------SSSSEEEEE---CSEEEEEEECGGGTTCTTHHHHHH
T ss_pred h-----------------cccc-------c--------------cCcceeEec---CCeEEEEEECCCcccCccHHHHHH
Confidence 0 0000 0 001223332 35778899875 7999999999
Q ss_pred HHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhhc-cC--------------------C
Q 017268 203 CTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERR-AS--------------------E 261 (374)
Q Consensus 203 ~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~r-~~--------------------~ 261 (374)
.+|++.|+||.... +. +. --.|.|... ..++..+.|.+.+... .+ .
T Consensus 377 ~aL~~~~Ini~~is--tS-e~-~Is~vI~~~---------d~~~Av~aLh~~f~~~~t~~~~~~~~~~~~~v~Gia~~~~ 443 (600)
T 3l76_A 377 KTLADVGVNIEMIS--TS-EV-KVSCVIDQR---------DADRAIAALSNAFGVTLSPPKNQTDTSHLPAVRGVALDQD 443 (600)
T ss_dssp HHHHHTTCCCCEEE--EC-SS-EEEEEEEGG---------GHHHHHHHHHHHTTCCBCCCCCCCC---CCSCCEEEEECS
T ss_pred HHHHhCCCcEEEEe--cC-CC-EEEEEEcHH---------HHHHHHHHHHHhhcccCCCccccccccccCceEEEEeeCC
Confidence 99999999997654 32 22 223555432 3444555666665221 11 1
Q ss_pred ceEEEE-EeCCCccHHHHHHHHHHhCCceEEEEEEee
Q 017268 262 GLELEL-CTEDRVGLLSDITRIFRENSLSIKRAEIST 297 (374)
Q Consensus 262 ~tvieV-~~~DRpGLL~~It~~L~~~~i~I~~a~i~T 297 (374)
-..|.| ..+|+||+.++|...|++.||+|....-+.
T Consensus 444 ~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI~q~~ 480 (600)
T 3l76_A 444 QAQIAIRHVPDRPGMAAQLFTALAEANISVDMIIQSQ 480 (600)
T ss_dssp EEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred EEEEEEecCCCCccHHHHHHHHHHHcCCcEEEEEecc
Confidence 245555 458999999999999999999997665543
No 33
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=96.69 E-value=0.0057 Score=52.37 Aligned_cols=59 Identities=24% Similarity=0.438 Sum_probs=44.2
Q ss_pred EEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEcCCCCCCChhHHHHHHHHHhh
Q 017268 264 ELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 330 (374)
Q Consensus 264 vieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d~~g~~l~~~~~~~l~~~l~~ 330 (374)
.|+|.|.||+|+|++|+++|+++++||..+.+.+.|. +|+.-. . .+.+.+..|...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~g~-----i~~~~~-~--~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGR-----IYLNFA-E--LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETTTE-----EEEEEC-C--CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecCCE-----EEEEEE-e--CCHHHHHHHHHHHHc
Confidence 4799999999999999999999999999999977632 555433 1 223455666665554
No 34
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.66 E-value=0.0068 Score=52.44 Aligned_cols=63 Identities=11% Similarity=0.141 Sum_probs=48.9
Q ss_pred eEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeC-CeeE-EEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 017268 49 HTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN-DRAA-AVVHVTDHSTGYAIKDPKRLSTIKELLFN 119 (374)
Q Consensus 49 ~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~-~~~~-dvf~V~~~~~g~~~~~~~~~~~l~~~L~~ 119 (374)
...|.|...|+||+|++|+++|+..|+||.+..+..+. ++.. .++.|.. ++..++.|.+.|.+
T Consensus 4 ~~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~--------d~~~leql~kQL~K 68 (165)
T 2pc6_A 4 RHIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG--------PDEIVEQITKQLNK 68 (165)
T ss_dssp EEEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE--------CHHHHHHHHHHHHH
T ss_pred EEEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec--------cHHHHHHHHHHhcC
Confidence 36789999999999999999999999999999998654 3444 4566642 13566777777776
No 35
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.57 E-value=0.031 Score=48.04 Aligned_cols=111 Identities=14% Similarity=0.123 Sum_probs=72.3
Q ss_pred cCCCCeEEEEEEe-CCccchHHHHHHHHHhcCCeEEEEEEEee---CCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 017268 44 MPTEEHTSIEFTG-TDRPGLFSEVCAVLADLHCNVVNAEIWTH---NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119 (374)
Q Consensus 44 ~~~~~~~~I~I~~-~DrpGL~a~I~~vL~~~glnI~~A~I~T~---~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~ 119 (374)
....+...|+|.+ +|+||.++++..+|+++|+||.--..... .+.....|.|... +. ++..+.|.+
T Consensus 11 a~~~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~-------d~---~~a~~~L~~ 80 (167)
T 2dt9_A 11 ALDLDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD-------FA---QEALEALEP 80 (167)
T ss_dssp EEECSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG-------GH---HHHHHHHHH
T ss_pred EEeCCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH-------HH---HHHHHHHHH
Confidence 4566777888876 89999999999999999999985433221 1233456777541 11 222233332
Q ss_pred HHcCCCcccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeCC---Ccc
Q 017268 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSKD---RPK 196 (374)
Q Consensus 120 ~L~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~D---rpG 196 (374)
+..+.. . .+.+ ..+...|.|++.+ +||
T Consensus 81 -~~~~~~--------------------------------------------~--~v~~---~~~~a~vsvVG~gm~~~~G 110 (167)
T 2dt9_A 81 -VLAEIG--------------------------------------------G--EAIL---RPDIAKVSIVGVGLASTPE 110 (167)
T ss_dssp -HHHHHC--------------------------------------------C--EEEE---ECSEEEEEEEESSGGGSTH
T ss_pred -HHHHhC--------------------------------------------C--cEEE---eCCEEEEEEECCCcccCcC
Confidence 111000 0 1222 1256778888866 999
Q ss_pred hHHHHHHHHHhCCceEEE
Q 017268 197 LLFDIVCTLTDMQYVVFH 214 (374)
Q Consensus 197 Ll~~i~~~l~~~glnI~~ 214 (374)
+++++..+|++.|+||..
T Consensus 111 v~a~~f~aL~~~~InI~~ 128 (167)
T 2dt9_A 111 VPAKMFQAVASTGANIEM 128 (167)
T ss_dssp HHHHHHHHHHHTTCCCCE
T ss_pred HHHHHHHHHHHCCCCEEE
Confidence 999999999999999944
No 36
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.55 E-value=0.018 Score=50.47 Aligned_cols=133 Identities=12% Similarity=0.114 Sum_probs=82.5
Q ss_pred CEEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh-
Q 017268 183 DYTVITMR-SKDRPKLLFDIVCTLTDMQYVVFHGMVNTG---RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER- 257 (374)
Q Consensus 183 ~~t~v~V~-~~DrpGLl~~i~~~l~~~glnI~~A~i~T~---~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~- 257 (374)
+.+.|+|. .+|+||.++++..+|++.|+||..-..... .|...-.|.|...+. ....++-+.+...+..
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~~~------~~a~~~L~~~~~el~~~ 88 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVG------PAAVEKLDSLRNEIGFS 88 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETTTH------HHHHHHHHHTHHHHCCS
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehhHH------HHHHHHHHHHHHhcCcc
Confidence 45556654 589999999999999999999975544322 455556677765321 1222222222222211
Q ss_pred c--c-CCceEEEEEeC---CCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEcCCCCCCChhHHHHHHHHHh
Q 017268 258 R--A-SEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 329 (374)
Q Consensus 258 r--~-~~~tvieV~~~---DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d~~g~~l~~~~~~~l~~~l~ 329 (374)
. . ..-..+.|.+. ++||+.+++.++|++.||||.... |. ...-.|.|...+. ++.+..|.++|.
T Consensus 89 ~v~~~~~va~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is--tS--ei~Is~vV~~~d~----~~Av~aLH~~f~ 158 (181)
T 3s1t_A 89 QLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TS--EIRISVLCRDTEL----DKAVVALHEAFG 158 (181)
T ss_dssp EEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE--EE--TTEEEEEEEGGGH----HHHHHHHHHHHT
T ss_pred eEEEeCCEEEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE--cC--CCEEEEEEeHHHH----HHHHHHHHHHHc
Confidence 1 1 23467777665 899999999999999999998877 32 2333455644311 234556655553
No 37
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.44 E-value=0.014 Score=51.63 Aligned_cols=63 Identities=14% Similarity=0.278 Sum_probs=49.5
Q ss_pred ceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEe-ecC-CeeeeEEEEEcCCCCCCChhHHHHHHHHHhh
Q 017268 262 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEIS-TIG-GKVKDTFYVTDVTGNPVDPKIIDSIRRQIGH 330 (374)
Q Consensus 262 ~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~-T~g-~~~~D~Fyv~d~~g~~l~~~~~~~l~~~l~~ 330 (374)
...|.|...|+||.|++|+.+|+++|+||.++.+. |.. +...-++.|... +..+++|..+|.+
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~K 93 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYK 93 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTT
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcC
Confidence 36899999999999999999999999999999886 443 334455656432 3567888888887
No 38
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=96.19 E-value=0.062 Score=53.16 Aligned_cols=133 Identities=12% Similarity=0.121 Sum_probs=82.4
Q ss_pred CEEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh-
Q 017268 183 DYTVITMR-SKDRPKLLFDIVCTLTDMQYVVFHGMVNTG---RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER- 257 (374)
Q Consensus 183 ~~t~v~V~-~~DrpGLl~~i~~~l~~~glnI~~A~i~T~---~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~- 257 (374)
+.+.|+|. .+|+||.++++.+.|+++|+||..-...|. .|...-.|.|...+ ..+..++-+.+...|..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~~------~~~a~~~l~~~~~~~~~~ 336 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRSD------GRRAMEILKKLQVQGNWT 336 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETTT------HHHHHHHHHHHHTTTTCS
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEechh------HHHHHHHHHHHHHHcCCc
Confidence 56677887 689999999999999999999987655443 34445557776421 11222222222222221
Q ss_pred c---cCCceEEEEEeC---CCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEcCCCCCCChhHHHHHHHHHh
Q 017268 258 R---ASEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 329 (374)
Q Consensus 258 r---~~~~tvieV~~~---DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d~~g~~l~~~~~~~l~~~l~ 329 (374)
. ...-.++.|.+. ++||++.++.++|++.||||... +|.. ..-.|.|...+ .++.++.|.++|.
T Consensus 337 ~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i--s~Se--~~is~vV~~~d----~~~Av~~Lh~~f~ 406 (421)
T 3ab4_A 337 NVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIELI--STSE--IRISVLIREDD----LDAAARALHEQFQ 406 (421)
T ss_dssp EEEEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCEE--EEET--TEEEEEEEGGG----HHHHHHHHHHHTT
T ss_pred eEEEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEEE--EcCC--CeEEEEEeHHH----HHHHHHHHHHHHh
Confidence 1 122356777775 89999999999999999999944 3432 23345553321 0234455555554
No 39
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=95.93 E-value=0.04 Score=48.67 Aligned_cols=99 Identities=8% Similarity=0.060 Sum_probs=66.4
Q ss_pred EEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEE-ecC-CeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh----
Q 017268 184 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVN-TGR-TEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER---- 257 (374)
Q Consensus 184 ~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~-T~~-g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~---- 257 (374)
...++|...|+||.|++|+++|+..|+||.+..+. |.+ +...-++.|... +...++|.+.|.+..+-
T Consensus 29 ~~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~-------e~~ieqL~kQL~KLidVikV~ 101 (193)
T 2fgc_A 29 EHLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD-------DKTIEQIEKQAYKLVEVVKVT 101 (193)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC-------TTHHHHHHHHHTTSTTEEEEE
T ss_pred EEEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC-------HHHHHHHHHHhcCcCceEEEE
Confidence 35699999999999999999999999999998886 444 555555666543 13677888877764321
Q ss_pred -ccC--C------ceEEEEEeCCCccHHHHHHHHHHhCCceEEE
Q 017268 258 -RAS--E------GLELELCTEDRVGLLSDITRIFRENSLSIKR 292 (374)
Q Consensus 258 -r~~--~------~tvieV~~~DRpGLL~~It~~L~~~~i~I~~ 292 (374)
-.+ . -..+.|.+... -.+|.+...-++-.|..
T Consensus 102 dl~~~~~~~v~REl~LiKV~~~~~---r~ei~~i~~~fra~ivD 142 (193)
T 2fgc_A 102 PIDPLPENRVEREMALIKVRFDED---KQEIFQLVEIFRGKIID 142 (193)
T ss_dssp ECCSSGGGEEEEEEEEEEEECSSC---HHHHHHHHHHTTCEEEE
T ss_pred EecCCCCccceeEEEEEEEeCCcC---HHHHHHHHHHcCCEEEE
Confidence 012 1 24677776542 45555555555544433
No 40
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.72 E-value=0.014 Score=52.41 Aligned_cols=37 Identities=30% Similarity=0.418 Sum_probs=30.6
Q ss_pred eEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecC
Q 017268 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIG 299 (374)
Q Consensus 263 tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g 299 (374)
..|.|.+.||||+|++|+++|+++++||...+..+..
T Consensus 5 VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~ 41 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIK 41 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECC
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccc
Confidence 5789999999999999999999999999999998863
No 41
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.67 E-value=0.047 Score=48.63 Aligned_cols=134 Identities=12% Similarity=0.122 Sum_probs=82.6
Q ss_pred CCEEEEEEE-eCCCcchHHHHHHHHHhCCceEEEEEEEec---CCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh
Q 017268 182 KDYTVITMR-SKDRPKLLFDIVCTLTDMQYVVFHGMVNTG---RTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER 257 (374)
Q Consensus 182 ~~~t~v~V~-~~DrpGLl~~i~~~l~~~glnI~~A~i~T~---~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~ 257 (374)
.+...|++. .+|+||+.+++.+.|++.|+||.--..... ++.....|.+...+. ....++.+.+...+..
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~d~------~~~~~~l~~~~~~~~~ 106 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRDVG------PAAVEKLDSLRNEIGF 106 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGGGH------HHHHHHHHTTHHHHCC
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchhhH------HHHHHHHHHHHhhhce
Confidence 356777776 599999999999999999999976543321 345555677765321 1222222233332321
Q ss_pred c----cCCceEEEEE---eCCCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEcCCCCCCChhHHHHHHHHHh
Q 017268 258 R----ASEGLELELC---TEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPVDPKIIDSIRRQIG 329 (374)
Q Consensus 258 r----~~~~tvieV~---~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d~~g~~l~~~~~~~l~~~l~ 329 (374)
. .+.-..+.|. ...+||+..++.++|++.||||.... |. ...-.|.|...+. .+.+..|-++|.
T Consensus 107 ~~v~~~~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mIs--tS--Ei~IS~vV~~~d~----~~Av~aLH~~F~ 177 (200)
T 4go7_X 107 SQLLYDDHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS--TS--EIRISVLCRDTEL----DKAVVALHEAFG 177 (200)
T ss_dssp SEEEEECCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEEE--EC--SSEEEEEEEGGGH----HHHHHHHHHHHT
T ss_pred eeEEEecCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEEE--cc--CCEEEEEEeHHHH----HHHHHHHHHHhC
Confidence 1 1223455554 45899999999999999999998875 32 2344455643311 235566666654
No 42
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.49 E-value=0.066 Score=45.53 Aligned_cols=59 Identities=8% Similarity=0.018 Sum_probs=43.0
Q ss_pred EEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHH
Q 017268 186 VITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEA 253 (374)
Q Consensus 186 ~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~ 253 (374)
.|.|.|.||+|++++|+.+|+.+++||....+.+. |. +++.-+. .+...+..|...+..
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~~-g~----i~~~~~~----~~~~~~~~L~~~l~~ 60 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPI-GR----IYLNFAE----LEFESFSSLMAEIRR 60 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEETT-TE----EEEEECC----CCHHHHHHHHHHHHH
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEecC-CE----EEEEEEe----CCHHHHHHHHHHHHc
Confidence 47899999999999999999999999999999766 43 3344331 122355555555543
No 43
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.31 E-value=0.031 Score=50.26 Aligned_cols=48 Identities=10% Similarity=0.041 Sum_probs=36.0
Q ss_pred EEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEec-----CCeEEEEEEEEe
Q 017268 185 TVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG-----RTEAYQEFYIRH 232 (374)
Q Consensus 185 t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~-----~g~~~dvF~V~~ 232 (374)
..+.+.+.||||+|++|+.+|++++.||...+..+. ++.+.-.+.+.+
T Consensus 5 VtL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d 57 (223)
T 1y7p_A 5 RGLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEG 57 (223)
T ss_dssp EEEEEEEECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECS
T ss_pred EEEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECC
Confidence 568999999999999999999999999999999885 345654455544
No 44
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=95.10 E-value=1.5 Score=37.98 Aligned_cols=114 Identities=12% Similarity=0.056 Sum_probs=70.6
Q ss_pred cCCCCeEEEEEE-eCCccchHHHHHHHHHhcCCeEEEEEEEee---CCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHH
Q 017268 44 MPTEEHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTH---NDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFN 119 (374)
Q Consensus 44 ~~~~~~~~I~I~-~~DrpGL~a~I~~vL~~~glnI~~A~I~T~---~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~ 119 (374)
....+...|+|. .+|+||.+++|..+|+.+|+||.--..... .+.....|.|... +.. +..+.|.+
T Consensus 11 a~~~~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~-------~~~---~a~~~L~~ 80 (181)
T 3s1t_A 11 AHDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD-------VGP---AAVEKLDS 80 (181)
T ss_dssp EEECSEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETT-------THH---HHHHHHHH
T ss_pred EecCCEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehh-------HHH---HHHHHHHH
Confidence 334455566553 689999999999999999999964332222 2233456777541 111 22233332
Q ss_pred HHcCCCcccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeC---CCcc
Q 017268 120 VLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPK 196 (374)
Q Consensus 120 ~L~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~---DrpG 196 (374)
+..+.. ...|.++ .+...|.+++. +.||
T Consensus 81 -~~~el~---------------------------------------------~~~v~~~---~~va~VsvVG~gm~~~~G 111 (181)
T 3s1t_A 81 -LRNEIG---------------------------------------------FSQLLYD---DHIGKVSLIGAGMRSHPG 111 (181)
T ss_dssp -THHHHC---------------------------------------------CSEEEEE---SCEEEEEEEEECCTTCHH
T ss_pred -HHHhcC---------------------------------------------cceEEEe---CCEEEEEEEecccccCch
Confidence 110000 0112221 24566777764 8999
Q ss_pred hHHHHHHHHHhCCceEEEEE
Q 017268 197 LLFDIVCTLTDMQYVVFHGM 216 (374)
Q Consensus 197 Ll~~i~~~l~~~glnI~~A~ 216 (374)
+.+++..+|++.|+||....
T Consensus 112 vaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 112 VTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp HHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHHHHHHCCCcEEEEE
Confidence 99999999999999998765
No 45
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=95.04 E-value=1.1 Score=43.95 Aligned_cols=108 Identities=16% Similarity=0.194 Sum_probs=70.1
Q ss_pred CeEEEEEE-eCCccchHHHHHHHHHhcCCeEEEEEEEeeC--C-eeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHcC
Q 017268 48 EHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTHN--D-RAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRG 123 (374)
Q Consensus 48 ~~~~I~I~-~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~--~-~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~ 123 (374)
+.+.|+|. .+|+||.+++|...|+++|+||.--...|.. . .....|.|... +.. +..+.|.+ +..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~-------~~~---~a~~~l~~-~~~ 331 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS-------DGR---RAMEILKK-LQV 331 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT-------THH---HHHHHHHH-HHT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech-------hHH---HHHHHHHH-HHH
Confidence 44566776 5899999999999999999999855443332 2 23456777531 222 22333433 222
Q ss_pred CCcccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeC---CCcchHHH
Q 017268 124 YDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPKLLFD 200 (374)
Q Consensus 124 ~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~---DrpGLl~~ 200 (374)
+.. . ..|.+ ..+...|.|++. +.||++++
T Consensus 332 ~~~-------~--------------------------------------~~v~~---~~~~a~vsvVG~gm~~~~Gv~a~ 363 (421)
T 3ab4_A 332 QGN-------W--------------------------------------TNVLY---DDQVGKVSLVGAGMKSHPGVTAE 363 (421)
T ss_dssp TTT-------C--------------------------------------SEEEE---ECCEEEEEEECGGGTSCTTHHHH
T ss_pred HcC-------C--------------------------------------ceEEE---eCCeEEEEEEccCcccCccHHHH
Confidence 111 0 11222 125667888874 89999999
Q ss_pred HHHHHHhCCceEEE
Q 017268 201 IVCTLTDMQYVVFH 214 (374)
Q Consensus 201 i~~~l~~~glnI~~ 214 (374)
+..+|++.|+||..
T Consensus 364 ~f~aL~~~~InI~~ 377 (421)
T 3ab4_A 364 FMEALRDVNVNIEL 377 (421)
T ss_dssp HHHHHHHTTCCCCE
T ss_pred HHHHHHHCCCCEEE
Confidence 99999999999983
No 46
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=94.09 E-value=0.55 Score=41.63 Aligned_cols=118 Identities=14% Similarity=0.066 Sum_probs=71.9
Q ss_pred eee-ecCCCCeEEEEEE-eCCccchHHHHHHHHHhcCCeEEEEEEEee--CCeeE-EEEEEecCCCCCCCCCHHHHHHHH
Q 017268 40 SVG-VMPTEEHTSIEFT-GTDRPGLFSEVCAVLADLHCNVVNAEIWTH--NDRAA-AVVHVTDHSTGYAIKDPKRLSTIK 114 (374)
Q Consensus 40 ~i~-~~~~~~~~~I~I~-~~DrpGL~a~I~~vL~~~glnI~~A~I~T~--~~~~~-dvf~V~~~~~g~~~~~~~~~~~l~ 114 (374)
.|. ...+.+...|+|. .+|+||..++|.++|++.|+||-=--.... ++... ..|.+... +. +...
T Consensus 25 vVtGIa~~~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~~-------d~---~~~~ 94 (200)
T 4go7_X 25 ILTGVAHDRSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD-------VG---PAAV 94 (200)
T ss_dssp EEEEEEEECSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEGG-------GH---HHHH
T ss_pred cEEEEEccCCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecchh-------hH---HHHH
Confidence 344 4556677778776 589999999999999999999974322211 22333 46776541 11 2222
Q ss_pred HHHHHHHcCCCcccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEE---e
Q 017268 115 ELLFNVLRGYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMR---S 191 (374)
Q Consensus 115 ~~L~~~L~~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~---~ 191 (374)
..|.+ +..+.. ...|.++ .+...|.++ .
T Consensus 95 ~~l~~-~~~~~~---------------------------------------------~~~v~~~---~~iakVSvVG~GM 125 (200)
T 4go7_X 95 EKLDS-LRNEIG---------------------------------------------FSQLLYD---DHIGKVSLIGAGM 125 (200)
T ss_dssp HHHHT-THHHHC---------------------------------------------CSEEEEE---CCEEEEEEEEESC
T ss_pred HHHHH-HHhhhc---------------------------------------------eeeEEEe---cCeeeeeeecccc
Confidence 22222 110000 0112222 234455555 4
Q ss_pred CCCcchHHHHHHHHHhCCceEEEEE
Q 017268 192 KDRPKLLFDIVCTLTDMQYVVFHGM 216 (374)
Q Consensus 192 ~DrpGLl~~i~~~l~~~glnI~~A~ 216 (374)
+..||+.+++..+|++.|+||..-.
T Consensus 126 ~~~~GVaak~F~aLa~~~INI~mIs 150 (200)
T 4go7_X 126 RSHPGVTATFCEALAAVGVNIELIS 150 (200)
T ss_dssp TTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred ccCCCcHHHHHHHHHHCCCCEEEEE
Confidence 7899999999999999999998654
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=93.98 E-value=0.34 Score=48.56 Aligned_cols=129 Identities=11% Similarity=0.125 Sum_probs=81.5
Q ss_pred CEEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHH----
Q 017268 183 DYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAI---- 255 (374)
Q Consensus 183 ~~t~v~V~~---~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L---- 255 (374)
+...|+|.+ .++||+++++..+|+++|+||..-...+.. ..-.|.|...+ .++..+.|.+.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse--~~Is~~V~~~d---------~~~a~~~L~~~l~~~~ 385 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSE--TNISLVVSEED---------VDKALKALKREFGDFG 385 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTT--CCEEEEEEGGG---------HHHHHHHHHHHHCC--
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCC--CEEEEEEechH---------HHHHHHHHHHHHhhhc
Confidence 567788885 688999999999999999999866653432 23346666421 234444455444
Q ss_pred ----hhc--c------CCceEEEEEeC---CCccHHHHHHHHHHhCCceEEEEEEeecCCe-eeeEEEEEcCCCCCCChh
Q 017268 256 ----ERR--A------SEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGK-VKDTFYVTDVTGNPVDPK 319 (374)
Q Consensus 256 ----~~r--~------~~~tvieV~~~---DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~-~~D~Fyv~d~~g~~l~~~ 319 (374)
... . +.-.++.|.+. ++||++.++.++|++.||||... ++|.. ..-.|.|...+. ++
T Consensus 386 ~~~~~~~~~~~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~mi---sqgtSe~~Is~vV~~~d~----~~ 458 (473)
T 3c1m_A 386 KKSFLNNNLIRDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKMI---AQGSSEVNISFVIDEKDL----LN 458 (473)
T ss_dssp --CTTSCCCEEEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCEE---EESSCSSEEEEEEEGGGH----HH
T ss_pred ccccccccccceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEEE---ecCCCCceEEEEEcHHHH----HH
Confidence 221 0 11245777776 59999999999999999999433 23433 333455533311 23
Q ss_pred HHHHHHHHHh
Q 017268 320 IIDSIRRQIG 329 (374)
Q Consensus 320 ~~~~l~~~l~ 329 (374)
.++.|.++|.
T Consensus 459 Av~aLh~~f~ 468 (473)
T 3c1m_A 459 CVRKLHEKFI 468 (473)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 4455665554
No 48
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=93.58 E-value=0.17 Score=47.40 Aligned_cols=55 Identities=18% Similarity=0.256 Sum_probs=44.3
Q ss_pred ceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecCCe-eeeEEEEEcCCCCCCC
Q 017268 262 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGK-VKDTFYVTDVTGNPVD 317 (374)
Q Consensus 262 ~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~-~~D~Fyv~d~~g~~l~ 317 (374)
.|.|-+..+|+||.||++...|+.+|||+.+..-.-.+.+ -.=.||| |.+|..-+
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffv-D~eg~~~d 255 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYA-DFIGHRED 255 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEE-EEESCTTS
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEE-EEecCCCc
Confidence 3566666679999999999999999999999998877655 5567888 66687644
No 49
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=93.02 E-value=0.61 Score=45.99 Aligned_cols=77 Identities=16% Similarity=0.236 Sum_probs=54.4
Q ss_pred HHHHHHHHhcccCCCCCCCCceeeecCCCCeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEE
Q 017268 19 VIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHV 95 (374)
Q Consensus 19 ~~~~i~~~l~~~~~~~~~~~~~i~~~~~~~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V 95 (374)
..+.|.+.|..+.......-..++.....+.++|.++-+|.||.+++|..+|+++|+||.+-...|.++....+.-|
T Consensus 313 ~~~nl~~~l~~g~~~~~Vn~p~~~~~~~~~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~ 389 (416)
T 3k5p_A 313 VTRKLVEYSDVGSTVGAVNFPQVQLPPRPTGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEA 389 (416)
T ss_dssp HHHHHHHHHHHCCCTTBSSSCCCCCCCCSSSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEE
T ss_pred HHHHHHHHHhhCCCCceeeCCCcCCCCCCCceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEe
Confidence 44556666654433211122345544445788999999999999999999999999999988888877765555444
No 50
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=92.88 E-value=0.66 Score=45.56 Aligned_cols=77 Identities=12% Similarity=0.204 Sum_probs=53.0
Q ss_pred HHHHHHHHhcccCCCCCCCCceeeecCCCCeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEEe
Q 017268 19 VIDYIQQRLETDASFAPSLRSSVGVMPTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVT 96 (374)
Q Consensus 19 ~~~~i~~~l~~~~~~~~~~~~~i~~~~~~~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V~ 96 (374)
..+.|.+.|.++.......-..++.. ..+..+|.+.-.|+||.+++|+.+|+++|+||..-+..+.++.+..++-|.
T Consensus 302 ~~~nl~~~l~g~~~~~~vn~p~~~~~-~~~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD 378 (404)
T 1sc6_A 302 VAGKLIKYSDNGSTLSAVNFPEVSLP-LHGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIE 378 (404)
T ss_dssp HHHHHHHHHHHCCCTTBSSSCCCCCC-CCSSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEE
T ss_pred HHHHHHHHHcCCCCcceecccccccC-cCCcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcC
Confidence 44556666664432111111123321 115678999999999999999999999999999999999776666666664
No 51
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=92.72 E-value=0.58 Score=44.69 Aligned_cols=54 Identities=19% Similarity=0.341 Sum_probs=41.6
Q ss_pred eEEEEEeC--CCccHHHHHHHHHHhCCceEEEEEEeecCCee-eeEEEEEcCCCCCCC
Q 017268 263 LELELCTE--DRVGLLSDITRIFRENSLSIKRAEISTIGGKV-KDTFYVTDVTGNPVD 317 (374)
Q Consensus 263 tvieV~~~--DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~-~D~Fyv~d~~g~~l~ 317 (374)
+.+-+..+ |+||.||++...|+.+|||+.+..-.-...+. .=.||| |.+|..-+
T Consensus 207 ts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d 263 (329)
T 3luy_A 207 ESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIV-TLDAAPWE 263 (329)
T ss_dssp EEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEE-EESSCTTS
T ss_pred eEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEE-EEeCCcCC
Confidence 33334444 79999999999999999999999988776665 447777 66787654
No 52
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=92.66 E-value=0.26 Score=46.75 Aligned_cols=93 Identities=16% Similarity=0.240 Sum_probs=62.2
Q ss_pred HhCC-ceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEEeC-CCccHHHHHHHHH
Q 017268 206 TDMQ-YVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCTE-DRVGLLSDITRIF 283 (374)
Q Consensus 206 ~~~g-lnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~r~~~~tvieV~~~-DRpGLL~~It~~L 283 (374)
...| ++|..-.|....+-. -.|.|-......... .....|.|-+..+ |+||.||++...|
T Consensus 162 ~~Yg~L~il~~~I~D~~~N~-TRFlvl~~~~~~~~~-----------------~~~~kTSl~f~~~~~~pGaL~~~L~~F 223 (313)
T 3mwb_A 162 AEQPGLNVLAEDIGDNPDAV-TRFILVSRPGALPER-----------------TGADKTTVVVPLPEDHPGALMEILDQF 223 (313)
T ss_dssp HHCTTCEEEESCCCSCTTCE-EEEEEEECSCCCCCC-----------------CSSEEEEEEEECSSCCTTHHHHHHHHH
T ss_pred HHcCChhhhhhcccCCCcce-eEEEEEecCCCCCCC-----------------CCCCeEEEEEEeCCCCCCHHHHHHHHH
Confidence 4567 888887776644322 246665543321110 0112467777775 9999999999999
Q ss_pred HhCCceEEEEEEeecCCee-eeEEEEEcCCCCCCC
Q 017268 284 RENSLSIKRAEISTIGGKV-KDTFYVTDVTGNPVD 317 (374)
Q Consensus 284 ~~~~i~I~~a~i~T~g~~~-~D~Fyv~d~~g~~l~ 317 (374)
+.+|||+.+..-.-..... .=.||| |.+|..-+
T Consensus 224 a~~gINLtkIESRP~~~~~~~Y~Ffi-D~eg~~~d 257 (313)
T 3mwb_A 224 ASRGVNLSRIESRPTGQYLGHYFFSI-DADGHATD 257 (313)
T ss_dssp HTTTCCEEEEEEEECSSSTTSEEEEE-EEESCTTS
T ss_pred HHCCccEEEEEEeecCCCCccEEEEE-EEeCCCCc
Confidence 9999999999987765553 457888 56677644
No 53
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=92.41 E-value=0.56 Score=47.65 Aligned_cols=63 Identities=21% Similarity=0.306 Sum_probs=49.8
Q ss_pred CCceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeec--CCeeeeEEEEEcCCCCCCChhHHHHHHH
Q 017268 260 SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI--GGKVKDTFYVTDVTGNPVDPKIIDSIRR 326 (374)
Q Consensus 260 ~~~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~--g~~~~D~Fyv~d~~g~~l~~~~~~~l~~ 326 (374)
+..+.+-+.-.|+||.+..|+..|.++||||...++.-. |+.+.-++.+ ..+++++.+++|++
T Consensus 452 ~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~v----d~~~~~~~l~~l~~ 516 (529)
T 1ygy_A 452 AQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRL----DQDVPDDVRTAIAA 516 (529)
T ss_dssp SCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEE----SSCCCHHHHHHHHH
T ss_pred CCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEE----CCCCCHHHHHHHhc
Confidence 446889999999999999999999999999999999764 4556666655 23455667777765
No 54
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=91.92 E-value=0.42 Score=46.94 Aligned_cols=50 Identities=12% Similarity=0.106 Sum_probs=44.5
Q ss_pred CEEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEe
Q 017268 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRH 232 (374)
Q Consensus 183 ~~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~ 232 (374)
+...+.+.-.|+||.+.+|+.+|.++|+||......+.++.++-++.|..
T Consensus 330 ~~~rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEECSSEEEEEEEEEC
T ss_pred CcceEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccCCCCEEEEEEEcCC
Confidence 34568888999999999999999999999999999998888888777765
No 55
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=91.28 E-value=0.59 Score=43.34 Aligned_cols=83 Identities=12% Similarity=0.208 Sum_probs=58.0
Q ss_pred hCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhhccCCceEEEEEe---CCCccHHHHHHHHH
Q 017268 207 DMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRASEGLELELCT---EDRVGLLSDITRIF 283 (374)
Q Consensus 207 ~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~r~~~~tvieV~~---~DRpGLL~~It~~L 283 (374)
.+|++|..-.|....+- .-.|+|-.... +.. ...|.|-+.. .|+||.||++...|
T Consensus 153 ~ygL~il~~~I~D~~~N-~TRF~vl~~~~-~~~--------------------~~ktsl~f~~~~~~~~pGaL~~~L~~F 210 (267)
T 2qmw_A 153 AYGFTPIDTHIEDYPHN-VTRFLVIKNQQ-QFD--------------------QNATSLMFLITPMHDKPGLLASVLNTF 210 (267)
T ss_dssp GGTCCEEEECCCSCSCC-EEEEEEEESCC-CCC--------------------SSCSEEEEEEEESSCCTTHHHHHHHHH
T ss_pred HCCCcEeeccccCCCCC-ceEEEEEecCC-CCC--------------------CCeEEEEEEcCCCCCCcChHHHHHHHH
Confidence 45888888777665432 22366655432 100 1236666777 89999999999999
Q ss_pred HhCCceEEEEEEeecCCe-eeeEEEEEcCC
Q 017268 284 RENSLSIKRAEISTIGGK-VKDTFYVTDVT 312 (374)
Q Consensus 284 ~~~~i~I~~a~i~T~g~~-~~D~Fyv~d~~ 312 (374)
+.+|||+.+..-.-.++. -.=.||| |.+
T Consensus 211 a~~gINLtkIESRP~~~~~~~Y~Ffi-D~e 239 (267)
T 2qmw_A 211 ALFNINLSWIESRPLKTQLGMYRFFV-QAD 239 (267)
T ss_dssp HTTTCCEEEEEEEECSSSTTCEEEEE-EES
T ss_pred HHcCCCeeEEEEeecCCCCccEEEEE-EEe
Confidence 999999999998877655 5568888 444
No 56
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=91.26 E-value=3 Score=41.61 Aligned_cols=116 Identities=14% Similarity=0.176 Sum_probs=71.5
Q ss_pred CCCeEEEEEEe---CCccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHc
Q 017268 46 TEEHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLR 122 (374)
Q Consensus 46 ~~~~~~I~I~~---~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~L~ 122 (374)
..+...|+|.+ .++||..+++..+|+.+|+||.--...| ++ ....|.|... + .++..+.|.+.+-
T Consensus 315 ~~~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~t-se-~~Is~~V~~~-------d---~~~a~~~L~~~l~ 382 (473)
T 3c1m_A 315 IKNVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGS-SE-TNISLVVSEE-------D---VDKALKALKREFG 382 (473)
T ss_dssp EEEEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECC-TT-CCEEEEEEGG-------G---HHHHHHHHHHHHC
T ss_pred cCCeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecC-CC-CEEEEEEech-------H---HHHHHHHHHHHHh
Confidence 34667788886 6788999999999999999997544423 22 3456777541 1 1334444554441
Q ss_pred CCCcccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeC---CCcchHH
Q 017268 123 GYDDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPKLLF 199 (374)
Q Consensus 123 ~~~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~---DrpGLl~ 199 (374)
+... + .|.. ...-..|.++ .+...|.|++. ++||+++
T Consensus 383 ~~~~------------------~---------~~~~----------~~~~~~v~~~---~~~a~vsvVG~gm~~~~Gvaa 422 (473)
T 3c1m_A 383 DFGK------------------K---------SFLN----------NNLIRDVSVD---KDVCVISVVGAGMRGAKGIAG 422 (473)
T ss_dssp C-------------------------------CTTS----------CCCEEEEEEE---EEEEEEEEECTTTTTCTTHHH
T ss_pred hhcc------------------c---------cccc----------ccccceEEEe---CCcEEEEEEecCCCCChhHHH
Confidence 1000 0 0000 0000123332 24667888874 6999999
Q ss_pred HHHHHHHhCCceEE
Q 017268 200 DIVCTLTDMQYVVF 213 (374)
Q Consensus 200 ~i~~~l~~~glnI~ 213 (374)
++..+|++.|+||.
T Consensus 423 k~f~aL~~~~InI~ 436 (473)
T 3c1m_A 423 KIFTAVSESGANIK 436 (473)
T ss_dssp HHHHHHHHHTCCCC
T ss_pred HHHHHHHHCCCCEE
Confidence 99999999999994
No 57
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=89.95 E-value=1.1 Score=45.39 Aligned_cols=62 Identities=13% Similarity=0.076 Sum_probs=47.7
Q ss_pred CEEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEEEeCCCCCCCCHHHHHHHHH
Q 017268 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG--RTEAYQEFYIRHVDGLPISSEAERERVIQ 249 (374)
Q Consensus 183 ~~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~--~g~~~dvF~V~~~~g~~~~~~~~~~~L~~ 249 (374)
....+.+.-+|+||.+.+++.+|.++|+||...++... ++.++-++.+.++ ++ ++.+++|++
T Consensus 453 ~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~----~~-~~~l~~l~~ 516 (529)
T 1ygy_A 453 QGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD----VP-DDVRTAIAA 516 (529)
T ss_dssp CSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC----CC-HHHHHHHHH
T ss_pred CccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC----CC-HHHHHHHhc
Confidence 34567888999999999999999999999999999863 6778777767543 22 345555543
No 58
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=89.33 E-value=0.7 Score=46.02 Aligned_cols=117 Identities=11% Similarity=0.124 Sum_probs=74.2
Q ss_pred CEEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh-c
Q 017268 183 DYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER-R 258 (374)
Q Consensus 183 ~~t~v~V~~---~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~-r 258 (374)
+.+.|+|.. ++.||.++++..+|+++|++|.... +... .-.|.|...+-.. ...++.+.|...+.. .
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i~--~~~~--~is~~V~~~d~~~-----~~~~~~~el~~~~~~~~ 367 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHMP--SGVD--SVSLVIEDCKLDG-----KCDKIIEEIKKQCNPDS 367 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEBC--EETT--EEEEEEEHHHHTT-----THHHHHHHHHHHSCCSE
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEEe--cCCC--EEEEEEecchHHH-----HHHHHHHHHHHhcCCCc
Confidence 466788885 6899999999999999999997432 2111 2336665432110 223344444433311 1
Q ss_pred c---CCceEEEEEeC---CCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEc
Q 017268 259 A---SEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310 (374)
Q Consensus 259 ~---~~~tvieV~~~---DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d 310 (374)
. ..-..|.|.+. .+||+..++.++|++.||||....-.|. ...-.|.|..
T Consensus 368 v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIsqgtS--ei~Is~vV~~ 423 (446)
T 3tvi_A 368 IEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMIDQGSS--EINVIVGVET 423 (446)
T ss_dssp EEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEEECSC--TTEEEEEEEG
T ss_pred EEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEEecCC--CceEEEEEcH
Confidence 1 12367888776 5899999999999999999988753232 2233455543
No 59
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=85.72 E-value=12 Score=37.03 Aligned_cols=108 Identities=8% Similarity=0.090 Sum_probs=67.7
Q ss_pred CeEEEEEEe---CCccchHHHHHHHHHhcCCeEEEEEEEeeCCeeEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHcCC
Q 017268 48 EHTSIEFTG---TDRPGLFSEVCAVLADLHCNVVNAEIWTHNDRAAAVVHVTDHSTGYAIKDPKRLSTIKELLFNVLRGY 124 (374)
Q Consensus 48 ~~~~I~I~~---~DrpGL~a~I~~vL~~~glnI~~A~I~T~~~~~~dvf~V~~~~~g~~~~~~~~~~~l~~~L~~~L~~~ 124 (374)
+.+.|+|.+ ++.||..++|..+|+.+|+||.-- +.+ .....|.|... + .. ...+.+.+.|.+.+..
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~i---~~~-~~~is~~V~~~-d---~~--~~~~~~~~el~~~~~~- 365 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEHM---PSG-VDSVSLVIEDC-K---LD--GKCDKIIEEIKKQCNP- 365 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEEB---CEE-TTEEEEEEEHH-H---HT--TTHHHHHHHHHHHSCC-
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEEE---ecC-CCEEEEEEecc-h---HH--HHHHHHHHHHHHhcCC-
Confidence 445677775 589999999999999999999732 222 22345767541 1 00 0112333333321110
Q ss_pred CcccccccccCCCCCCcchhhhhhhcccCchhhhhhhhccccCCCCCCCEEEEEcCCCCEEEEEEEeC---CCcchHHHH
Q 017268 125 DDFRKAKTSLSPPGIMNRERRLHQIMFDDRDYERVEKAVGRVEDKSSRPQVTVLNIEKDYTVITMRSK---DRPKLLFDI 201 (374)
Q Consensus 125 ~~~~~~~~~l~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~i~~~~~~~t~v~V~~~---DrpGLl~~i 201 (374)
..|.++ .+...|.|++. ..||+.+++
T Consensus 366 ------------------------------------------------~~v~v~---~~vA~VSvVG~gM~~~~Gvaari 394 (446)
T 3tvi_A 366 ------------------------------------------------DSIEIH---PNMALVATVGTGMAKTKGIANKI 394 (446)
T ss_dssp ------------------------------------------------SEEEEE---EEEEEEEEECGGGSSCTTHHHHH
T ss_pred ------------------------------------------------CcEEEe---CCeEEEEEECCCccCChhHHHHH
Confidence 112221 24567888875 589999999
Q ss_pred HHHHHhCCceEEEEEE
Q 017268 202 VCTLTDMQYVVFHGMV 217 (374)
Q Consensus 202 ~~~l~~~glnI~~A~i 217 (374)
..+|++.|+||.....
T Consensus 395 f~aLa~~~InI~mIsq 410 (446)
T 3tvi_A 395 FTALSKENVNIRMIDQ 410 (446)
T ss_dssp HHHHHHTTCCEEEEEE
T ss_pred HHHHHHCCCCEEEEEe
Confidence 9999999999986543
No 60
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=84.88 E-value=2.3 Score=41.83 Aligned_cols=49 Identities=12% Similarity=0.149 Sum_probs=43.8
Q ss_pred CEEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEE
Q 017268 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIR 231 (374)
Q Consensus 183 ~~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~ 231 (374)
+...|.+.-+|.||.+.+|..+|+++|+||..-...|.++.++-+.-|.
T Consensus 342 ~~~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~~~~~~y~~~d~~ 390 (416)
T 3k5p_A 342 TGTRFMHVHENRPGILNSLMNVFSHHHINIASQFLQTDGEVGYLVMEAD 390 (416)
T ss_dssp SSEEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEECSSCEEEEEEEC
T ss_pred CceEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccCCCceEEEEEEec
Confidence 5678999999999999999999999999999999999998877666554
No 61
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=83.29 E-value=1.8 Score=36.37 Aligned_cols=110 Identities=15% Similarity=0.161 Sum_probs=66.1
Q ss_pred CEEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 017268 183 DYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERRA 259 (374)
Q Consensus 183 ~~t~v~V~~---~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~r~ 259 (374)
+...|+|.+ ++.||..+++..+|+++|+||..-. +... --.|.|.+.+ .++++.+.|.. . ...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~--~s~~--~Isf~v~~~~--------~~~~il~~l~~-~-~~v 82 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVA--TSEV--GVSLTIDNDK--------NLPDIVRALSD-I-GDV 82 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEE--CCSS--EEEEEESCCT--------THHHHHHHHTT-T-EEE
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEE--ecCC--EEEEEECChH--------HHHHHHHHHhc-c-CeE
Confidence 466788874 5899999999999999999985433 2222 2346665321 12233233322 1 111
Q ss_pred ---CCceEEEEEeC---CCccHHHHHHHHHHhCCceEEEEEEeecCCe-eeeEEEEEcC
Q 017268 260 ---SEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGK-VKDTFYVTDV 311 (374)
Q Consensus 260 ---~~~tvieV~~~---DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~-~~D~Fyv~d~ 311 (374)
..-..+.|.+. ++||+..++..+|+ |++|.... +|.. ..-.|.|...
T Consensus 83 ~~~~~~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~is---qg~Se~~is~vv~~~ 136 (157)
T 3mah_A 83 TVDKDMVIICIVGDMEWDNVGFEARIINALK--GVPVRMIS---YGGSNYNVSVLVKAE 136 (157)
T ss_dssp EEEEEEEEEEEEC------CCHHHHHHHTTT--TSCCSEEE---ECSSSSCEEEEEEGG
T ss_pred EEeCCeEEEEEECCCcccCccHHHHHHHHhC--CCCeEEEe---eCCCCCEEEEEEcHH
Confidence 12356777765 68999999999999 89887754 3322 3345656443
No 62
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=81.37 E-value=1.5 Score=43.55 Aligned_cols=50 Identities=36% Similarity=0.452 Sum_probs=35.4
Q ss_pred ceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeec--CCeeeeEEEEEcC
Q 017268 262 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTI--GGKVKDTFYVTDV 311 (374)
Q Consensus 262 ~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~--g~~~~D~Fyv~d~ 311 (374)
.+-+.+...|+||.|..|+.+|.++||+|++..=.-. ++.......+|..
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th~ 410 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTHV 410 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEECS
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEecc
Confidence 4789999999999999999999999999998753221 1112445556553
No 63
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=80.74 E-value=3 Score=42.10 Aligned_cols=119 Identities=13% Similarity=0.154 Sum_probs=73.9
Q ss_pred CEEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCC-CHHHHHHHHHHHHHHHhhc
Q 017268 183 DYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPIS-SEAERERVIQCLEAAIERR 258 (374)
Q Consensus 183 ~~t~v~V~~---~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~-~~~~~~~L~~~L~~~L~~r 258 (374)
+.+.|+|.+ .+.||+++++..+|+++|+||..-. +.. .--.|.|...+..... ....++++.+.|.. + ..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~--sse--~sis~~v~~~~~~~~~~~~~~l~~~~~el~~-~-~~ 413 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVA--TSE--VSISLTLDPSKLWSRELIQQELDHVVEELEK-I-AV 413 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEE--EET--TEEEEEECCGGGSSSCCCHHHHHHHHHHHTT-T-SE
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEE--eCC--CeEEEEEechHhhhhhHHHHHHHHHHHHhCC-C-Ce
Confidence 567788885 7899999999999999999998663 221 1223666543211110 11223333332221 0 01
Q ss_pred c---CCceEEEEEeC--CCccHHHHHHHHHHhCCceEEEEEEeecCCe-eeeEEEEEc
Q 017268 259 A---SEGLELELCTE--DRVGLLSDITRIFRENSLSIKRAEISTIGGK-VKDTFYVTD 310 (374)
Q Consensus 259 ~---~~~tvieV~~~--DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~-~~D~Fyv~d 310 (374)
. ..-.+|.|.+. ..||+..++..+|++.||||.... .|.. ..-.|.|..
T Consensus 414 v~~~~~~a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mIs---qGsSei~Is~vV~~ 468 (510)
T 2cdq_A 414 VNLLKGRAIISLIGNVQHSSLILERAFHVLYTKGVNVQMIS---QGASKVNISFIVNE 468 (510)
T ss_dssp EEEEEEEEEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEEE---ECTTCSEEEEEEEH
T ss_pred EEEeCCcEEEEEEEECCCChhHHHHHHHHHHHCCCCEEEEE---ecCCcceEEEEEeH
Confidence 0 12356777777 788999999999999999998764 4433 334565643
No 64
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=78.68 E-value=3.7 Score=38.19 Aligned_cols=49 Identities=14% Similarity=0.059 Sum_probs=38.6
Q ss_pred EEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEec-CCeEEEEEEEEe
Q 017268 184 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG-RTEAYQEFYIRH 232 (374)
Q Consensus 184 ~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~-~g~~~dvF~V~~ 232 (374)
.|.|.+..+|+||-|+++.+.|+.+|+|+..-...-. ++...-.|+|.-
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfvD~ 249 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLTKIESRPSRKKAFEYLFYADF 249 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTEEEEEEEE
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCeeEEEeeEcCCCCcceEEEEEE
Confidence 5667777789999999999999999999998777654 333455677764
No 65
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=78.17 E-value=12 Score=35.64 Aligned_cols=52 Identities=12% Similarity=0.135 Sum_probs=37.9
Q ss_pred EEEEEEEeC--CCcchHHHHHHHHHhCCceEEEEEEEecC-CeEEEEEEEEeCCCC
Q 017268 184 YTVITMRSK--DRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGL 236 (374)
Q Consensus 184 ~t~v~V~~~--DrpGLl~~i~~~l~~~glnI~~A~i~T~~-g~~~dvF~V~~~~g~ 236 (374)
.+.+.+..+ |+||-|+++.+.|+.+|+|+..-...-.. +...-.|+|.- +|.
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~-eg~ 260 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMTSFISRPIKGRTGTYSFIVTL-DAA 260 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEEEEEEEEETTEEEEEEEEEEE-SSC
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceEEEEeeECCCCCccEEEEEEE-eCC
Confidence 344444444 79999999999999999999887776544 44455677754 454
No 66
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=76.32 E-value=4.3 Score=38.38 Aligned_cols=50 Identities=16% Similarity=0.093 Sum_probs=37.8
Q ss_pred CEEEEEEEeC-CCcchHHHHHHHHHhCCceEEEEEEEec-CCeEEEEEEEEe
Q 017268 183 DYTVITMRSK-DRPKLLFDIVCTLTDMQYVVFHGMVNTG-RTEAYQEFYIRH 232 (374)
Q Consensus 183 ~~t~v~V~~~-DrpGLl~~i~~~l~~~glnI~~A~i~T~-~g~~~dvF~V~~ 232 (374)
..|.|.+..+ |+||-|+++.+.|+.+|+|+..-...-. ++...-.|+|.-
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~ 251 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLSRIESRPTGQYLGHYFFSIDA 251 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTSEEEEEEE
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEEEEEEeecCCCCccEEEEEEE
Confidence 4677777775 9999999999999999999987777643 332333477754
No 67
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=76.10 E-value=8.4 Score=38.13 Aligned_cols=49 Identities=22% Similarity=0.253 Sum_probs=34.0
Q ss_pred EEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEec--CCeEEEEEEEEe
Q 017268 184 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTG--RTEAYQEFYIRH 232 (374)
Q Consensus 184 ~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~--~g~~~dvF~V~~ 232 (374)
.+-+.+.+.|+||.|++|+.+|.++|++|.+....-. ++....+..++.
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~~q~~~~~~~~~~~~v~~th 409 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDAMVQKEPAEGEEQVDIILLTH 409 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEEEECC------CEEEEEEEC
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeEEeecccccCCCCceEEEEec
Confidence 4457888999999999999999999999988665432 111234445554
No 68
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=75.81 E-value=2.9 Score=41.12 Aligned_cols=50 Identities=20% Similarity=0.382 Sum_probs=40.7
Q ss_pred ceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecCCe-eeeEEEEEcCC
Q 017268 262 GLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGK-VKDTFYVTDVT 312 (374)
Q Consensus 262 ~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~-~~D~Fyv~d~~ 312 (374)
.|.|-+..+|+||-|+++...|+.+|||+.+....-.... -.=.||| |.+
T Consensus 34 KTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfV-D~e 84 (429)
T 1phz_A 34 AISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFT-YLD 84 (429)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEE-CBC
T ss_pred eEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEE-EEe
Confidence 4677777789999999999999999999999888766544 5568888 544
No 69
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=68.19 E-value=16 Score=33.48 Aligned_cols=51 Identities=14% Similarity=0.141 Sum_probs=38.6
Q ss_pred CEEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEec-CCeEEEEEEEEeC
Q 017268 183 DYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTG-RTEAYQEFYIRHV 233 (374)
Q Consensus 183 ~~t~v~V~~---~DrpGLl~~i~~~l~~~glnI~~A~i~T~-~g~~~dvF~V~~~ 233 (374)
..|.+.+.. +|+||-|+++.+.|+.+|+|+..-...-. ++...-.|+|.-.
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtkIESRP~~~~~~~Y~FfiD~e 239 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLSWIESRPLKTQLGMYRFFVQAD 239 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEEEEEEEECSSSTTCEEEEEEES
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCeeEEEEeecCCCCccEEEEEEEe
Confidence 345566666 89999999999999999999998777654 3334445777654
No 70
>1ib8_A Conserved protein SP14.3; nucleic acid binding protein, ribosomal protein, essential gene, structural genomics; NMR {Streptococcus pneumoniae} SCOP: b.38.2.1 d.52.4.1
Probab=61.03 E-value=34 Score=28.92 Aligned_cols=91 Identities=8% Similarity=0.100 Sum_probs=60.3
Q ss_pred HHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhhc----cCCceEEEEEeC--C
Q 017268 198 LFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIERR----ASEGLELELCTE--D 271 (374)
Q Consensus 198 l~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~r----~~~~tvieV~~~--D 271 (374)
..-+..++.. |+.+.+..+...++...-..+|..+.| ++- +.++.+-+.|...|++. .+..|.+||+++ |
T Consensus 15 ~~li~p~~~~-g~eLvdve~~~~g~~~~LrV~ID~~~g--i~l-ddC~~vSr~is~~LD~~~~d~i~~~Y~LEVSSPGld 90 (164)
T 1ib8_A 15 REVVEPVIEA-PFELVDIEYGKIGSDMILSIFVDKPEG--ITL-NDTADLTEMISPVLDTIKPDPFPEQYFLEITSPGLE 90 (164)
T ss_dssp HHHHHHHHCS-SSEEEEEEEEEETTEEEEEEEEECSSC--CCH-HHHHHHHHHHGGGTTTCCSCCCCSCEEEEEECCSSS
T ss_pred HHHHHHHHcC-CcEEEEEEEEecCCCcEEEEEEECCCC--CCH-HHHHHHHHHHHHHhccccccCCCCCeEEEEeCCCCC
Confidence 3345566777 999999999887765554556766544 332 47888888888888732 356899999988 6
Q ss_pred CccHHHHHHHHHHhCCceEEEEEEee
Q 017268 272 RVGLLSDITRIFRENSLSIKRAEIST 297 (374)
Q Consensus 272 RpGLL~~It~~L~~~~i~I~~a~i~T 297 (374)
|| |..--..-.-.|- .++|.+
T Consensus 91 Rp--L~~~~df~r~~G~---~V~V~l 111 (164)
T 1ib8_A 91 RP--LKTKDAVAGAVGK---YIHVGL 111 (164)
T ss_dssp SC--CSSHHHHHHHCSE---EEEEEC
T ss_pred CC--CCCHHHHHHhCCc---EEEEEE
Confidence 66 4444444455553 345555
No 71
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=36.08 E-value=22 Score=29.46 Aligned_cols=44 Identities=9% Similarity=0.073 Sum_probs=32.5
Q ss_pred eEEEEEe---CCCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEc
Q 017268 263 LELELCT---EDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTD 310 (374)
Q Consensus 263 tvieV~~---~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d 310 (374)
+.|+|.+ +|+||.+++|..+|++.||+|.....+ + ..-.|+|.+
T Consensus 19 a~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~I~~s---~-~~Isf~v~~ 65 (157)
T 3mah_A 19 TVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDMVATS---E-VGVSLTIDN 65 (157)
T ss_dssp EEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSCEECC---S-SEEEEEESC
T ss_pred EEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEEEEec---C-CEEEEEECC
Confidence 5677764 488999999999999999999776522 1 244676743
No 72
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=36.05 E-value=93 Score=31.19 Aligned_cols=110 Identities=13% Similarity=0.081 Sum_probs=72.0
Q ss_pred EEEEEEEeCCCcchHHHHHHHHHhCCceEEEEEEEecC-CeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHH------Hh
Q 017268 184 YTVITMRSKDRPKLLFDIVCTLTDMQYVVFHGMVNTGR-TEAYQEFYIRHVDGLPISSEAERERVIQCLEAA------IE 256 (374)
Q Consensus 184 ~t~v~V~~~DrpGLl~~i~~~l~~~glnI~~A~i~T~~-g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~------L~ 256 (374)
...+.|.-+||||-|.+++.++. +-||.+..=...+ +.+.-.+-|....+ ++..++|.+.|.+. |.
T Consensus 338 ~~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~~~~-----~~~~~~~~~~l~~~g~~~~~~~ 410 (514)
T 1tdj_A 338 EALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRLSRG-----LEERKEILQMLNDGGYSVVDLS 410 (514)
T ss_dssp EEEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEECSST-----HHHHHHHHHHHTSSSCEEETTS
T ss_pred cccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEeCCc-----HHHHHHHHHHHHhCCCCeEECC
Confidence 45677888999999999999888 6888766554322 22221222222211 34666777666532 10
Q ss_pred --------------hcc---CCceEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecCCe
Q 017268 257 --------------RRA---SEGLELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGK 301 (374)
Q Consensus 257 --------------~r~---~~~tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~ 301 (374)
++. +..-+..+.=+.|||-|.++...|.. +-||.-.+-..+|..
T Consensus 411 ~~~~~~~h~~~~~g~~~~~~~~e~~~~~~fpe~~gal~~fl~~~~~-~~~i~~~~yr~~g~~ 471 (514)
T 1tdj_A 411 DDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRFLNTLGT-YWNISLFHYRSHGTD 471 (514)
T ss_dssp SCHHHHHTGGGTCCCCCSSCCCCEEEEEECCCCTTHHHHHHHHHCS-CCCCCEEECBCTTTC
T ss_pred CCHHHHHHHHHhhCCcCccCCCceEEEEeCCCCCCHHHHHHHhcCC-CceEEEEeecCCCCC
Confidence 111 12456888999999999999999975 677777777777743
No 73
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=35.42 E-value=96 Score=23.82 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=35.4
Q ss_pred CEEEEEEEeCCCcchHHHHHHHHHhCCce-EEEEEEEecCCeEEEEEEEEeCCCCCC
Q 017268 183 DYTVITMRSKDRPKLLFDIVCTLTDMQYV-VFHGMVNTGRTEAYQEFYIRHVDGLPI 238 (374)
Q Consensus 183 ~~t~v~V~~~DrpGLl~~i~~~l~~~gln-I~~A~i~T~~g~~~dvF~V~~~~g~~~ 238 (374)
.++.+.+.+.| +......+.+.|+. +...-.....|.. |++.||+|..+
T Consensus 66 ~~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~~---~~~~DPdGn~i 115 (128)
T 3g12_A 66 PSLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGKK---AIVLDPDGHSI 115 (128)
T ss_dssp CSEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CEE---EEEECTTCCEE
T ss_pred CceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCccE---EEEECCCCCEE
Confidence 45668888888 78888889999999 7654333333433 88999999854
No 74
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=30.67 E-value=1e+02 Score=23.59 Aligned_cols=48 Identities=19% Similarity=0.179 Sum_probs=34.8
Q ss_pred ceEEEEEeCCCccHHHHHHHHHHhCCce-EEEEEEeecCCeeeeEEEEEcCCCCCC
Q 017268 262 GLELELCTEDRVGLLSDITRIFRENSLS-IKRAEISTIGGKVKDTFYVTDVTGNPV 316 (374)
Q Consensus 262 ~tvieV~~~DRpGLL~~It~~L~~~~i~-I~~a~i~T~g~~~~D~Fyv~d~~g~~l 316 (374)
...+.+...| +....+.|.+.|+. +...-.....+. - ||+.|++|..+
T Consensus 67 ~~~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~~~G~--~-~~~~DPdGn~i 115 (128)
T 3g12_A 67 SLQLGFQITD----LEKTVQELVKIPGAMCILDPTDMPDGK--K-AIVLDPDGHSI 115 (128)
T ss_dssp SEEEEEEESC----HHHHHHHHTTSTTCEEEEEEEECC-CE--E-EEEECTTCCEE
T ss_pred ceEEEEEeCC----HHHHHHHHHHCCCceeccCceeCCCcc--E-EEEECCCCCEE
Confidence 4678888888 88888999999999 654332221122 2 99999999876
No 75
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=30.46 E-value=36 Score=33.43 Aligned_cols=52 Identities=12% Similarity=0.158 Sum_probs=39.1
Q ss_pred CCCCeEEEEEEeCCccchHHHHHHHHHhcCCeEEEEEEEeeC-CeeEEEEEEe
Q 017268 45 PTEEHTSIEFTGTDRPGLFSEVCAVLADLHCNVVNAEIWTHN-DRAAAVVHVT 96 (374)
Q Consensus 45 ~~~~~~~I~I~~~DrpGL~a~I~~vL~~~glnI~~A~I~T~~-~~~~dvf~V~ 96 (374)
.....+.|.+..+|+||-|+++-++|+.+|+|+..-.-.-.. ....-.|+|.
T Consensus 30 tg~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD 82 (429)
T 1phz_A 30 NQNGAISLIFSLKEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTY 82 (429)
T ss_dssp CSSCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEEC
T ss_pred CCCCeEEEEEEeCCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEE
Confidence 345677888888999999999999999999999744443343 3345678884
No 76
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=30.27 E-value=1.2e+02 Score=30.20 Aligned_cols=63 Identities=17% Similarity=0.247 Sum_probs=40.9
Q ss_pred eEEEEEe---CCCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEcCCCCCC--ChhHHHHHHHHHh
Q 017268 263 LELELCT---EDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV--DPKIIDSIRRQIG 329 (374)
Q Consensus 263 tvieV~~---~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d~~g~~l--~~~~~~~l~~~l~ 329 (374)
+.|.|.+ .++||++++|..+|+++||+|...-.+ ...-.|+|...+.... ..+.++.+.+++.
T Consensus 342 ~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I~ss----e~sis~~v~~~~~~~~~~~~~~l~~~~~el~ 409 (510)
T 2cdq_A 342 TMLDIASTRMLGQVGFLAKVFSIFEELGISVDVVATS----EVSISLTLDPSKLWSRELIQQELDHVVEELE 409 (510)
T ss_dssp EEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEEEEE----TTEEEEEECCGGGSSSCCCHHHHHHHHHHHT
T ss_pred EEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEEEeC----CCeEEEEEechHhhhhhHHHHHHHHHHHHhC
Confidence 5788875 789999999999999999999988321 2334576643321111 1234455555554
No 77
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=26.45 E-value=29 Score=34.22 Aligned_cols=119 Identities=13% Similarity=0.130 Sum_probs=72.0
Q ss_pred CEEEEEEEe---CCCcchHHHHHHHHHhCCceEEEEEEEecCCeEEEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhh-c
Q 017268 183 DYTVITMRS---KDRPKLLFDIVCTLTDMQYVVFHGMVNTGRTEAYQEFYIRHVDGLPISSEAERERVIQCLEAAIER-R 258 (374)
Q Consensus 183 ~~t~v~V~~---~DrpGLl~~i~~~l~~~glnI~~A~i~T~~g~~~dvF~V~~~~g~~~~~~~~~~~L~~~L~~~L~~-r 258 (374)
+.+.|+|.+ .+.+|.++++..+|+++|++|..-. +. + .--.|.|...+.........++++...|.. +.. .
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~i~--ss-~-~sis~~v~~~~~~~~~~~~~~~~~~~el~~-~~~v~ 381 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDLIT--TS-E-VSVALTLDTTGSTSTGDTLLTQSLLMELSA-LCRVE 381 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSEEE--EE-T-TEEEEEECCCCCSSTTCCSSCHHHHHHHHH-HSCEE
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEEEE--eC-C-CeEEEEEeccccchhhHHHHHHHHHHHhcc-CCeEE
Confidence 567778876 4788999999999999999987554 22 2 223466654322110001234455555543 111 0
Q ss_pred c-CCceEEEEEeC---CCccHHHHHHHHHHhCCceEEEEEEeecCCee-eeEEEEEcC
Q 017268 259 A-SEGLELELCTE---DRVGLLSDITRIFRENSLSIKRAEISTIGGKV-KDTFYVTDV 311 (374)
Q Consensus 259 ~-~~~tvieV~~~---DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~-~D~Fyv~d~ 311 (374)
. +.-.+|.|.+. ..||+..++..+|++ +||.... +|... .-.|.|...
T Consensus 382 ~~~~~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~mIs---qg~Se~~Is~vV~~~ 434 (449)
T 2j0w_A 382 VEEGLALVALIGNDLSKACGVGKEVFGVLEP--FNIRMIC---YGASSHNLCFLVPGE 434 (449)
T ss_dssp EEEEEEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCEEE---ESSCTTEEEEEEEGG
T ss_pred EeCCeEEEEEECCCccccccHHHHHHHHHhC--CCeEEEE---ecCCCcEEEEEEeHH
Confidence 1 22467888887 589999999999976 7766443 44432 334656443
No 78
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=24.68 E-value=1.7e+02 Score=23.02 Aligned_cols=47 Identities=17% Similarity=0.271 Sum_probs=34.9
Q ss_pred eEEEEEeCCCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEEEcCCCCCC
Q 017268 263 LELELCTEDRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYVTDVTGNPV 316 (374)
Q Consensus 263 tvieV~~~DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv~d~~g~~l 316 (374)
..+.+...| +..+.+.|.+.|+.+...-.....+ -.||+.|++|..+
T Consensus 67 ~hl~f~V~d----~d~~~~~l~~~G~~v~~~p~~~~~G---~~~~~~DPdG~~i 113 (144)
T 3r6a_A 67 TQATFLVDS----LDKFKTFLEENGAEIIRGPSKVPTG---RNMTVRHSDGSVI 113 (144)
T ss_dssp CCEEEEESC----HHHHHHHHHHTTCEEEEEEEEETTE---EEEEEECTTSCEE
T ss_pred eEEEEEeCC----HHHHHHHHHHcCCEEecCCccCCCc---eEEEEECCCCCEE
Confidence 456666666 6778888999999987665444433 4689999999876
No 79
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=23.66 E-value=61 Score=26.42 Aligned_cols=33 Identities=24% Similarity=0.343 Sum_probs=25.1
Q ss_pred CCccHHHHHHHHHHhCCceEEEEEEeecCCeeeeEEEE
Q 017268 271 DRVGLLSDITRIFRENSLSIKRAEISTIGGKVKDTFYV 308 (374)
Q Consensus 271 DRpGLL~~It~~L~~~~i~I~~a~i~T~g~~~~D~Fyv 308 (374)
|-.|++..|+..|++.||.|... +|+ -.|-.+|
T Consensus 74 ~~vGilA~is~pLA~agIsif~i--Sty---~tD~IlV 106 (134)
T 1zhv_A 74 DETGIVLSVISPLSTNGIGIFVV--STF---DGDHLLV 106 (134)
T ss_dssp SSCCHHHHHHHHHHTTTCCCEEE--ECS---SCEEEEE
T ss_pred cHHHHHHHHHHHHHhCCCCeEEE--Eec---cccEEEE
Confidence 77799999999999999998754 444 2344445
Done!