BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017269
(374 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 135/268 (50%), Gaps = 53/268 (19%)
Query: 8 YWCYRCNRIIRIQ-SRTEDAIVCPDCHTGFIEQIET--------IQRPSNERYPAAEMYL 58
++CY+CNR + + S CP C+ GF+E+ + P+ P +++L
Sbjct: 23 FFCYQCNRTVNVTISPPSSDPTCPICNEGFLEEYDNPNPNQGSGFLNPNPNSIPFHDLFL 82
Query: 59 E---------------------------DTQNPETFPTTRFGRTRRNGGDRSPFNPVIVL 91
D NP TR GR GD F+P +
Sbjct: 83 TLSDPFASLLPLLFPSSSSTTTSSSASIDPNNPSLSGPTRSGR-----GDPFAFDPFTFI 137
Query: 92 RGPQTPDSGGGNEGTAMERGNFELFYDDATGAGLRPLPASMSDFLMGSGFDRVLDQLTQL 151
Q + + G +E + ++ + G R LPA++ D+ +G G ++++ QL +
Sbjct: 138 ---QNHLNDLRSSGAQIEF----VIQNNPSDQGFR-LPANIGDYFIGPGLEQLIQQLAEN 189
Query: 152 DFNGVTRFVNPPASKAAIESMPVVTIAESHVAKE-SHCAVCKEPFQLNSEAREMPCKHIY 210
D N R+ PPASK+AIE++P+V I +S++ E + CAVC + F+ +EA++MPCKH+Y
Sbjct: 190 DPN---RYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLY 246
Query: 211 HGECILPWLSMRNSCPLCRRELPNEAND 238
H +C+LPWL + NSCP+CR ELP + D
Sbjct: 247 HKDCLLPWLELHNSCPVCRHELPTDDPD 274
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 35/256 (13%)
Query: 8 YWCYRCNRIIRIQSRTEDAIVCPDCHTGFIEQIETIQ---------RPSNERYPAAEMYL 58
++CY+CN+ + I + CP C+ GF+E+ E S+ +P A+ +
Sbjct: 21 FFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPF- 79
Query: 59 EDTQNPETFPTTRFGRTRR--NGGD-RSPFNPVIVLRG---PQTPDSGGGNEGTAMER-- 110
T FG + +G D S F P + + Q P S + T ++
Sbjct: 80 ------STLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAFDPFTFLQNHL 133
Query: 111 -------GNFELFYDDATGAGLRPLPASMSDFLMGSGFDRVLDQLTQLDFNGVTRFVNPP 163
+FE ++ +P + D+ G G ++++ QL + D N R+ PP
Sbjct: 134 QTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDPN---RYGTPP 190
Query: 164 ASKAAIESMPVVTIAESHVAKE-SHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMR 222
ASK+AI+++P V + + + E + CAVC + F+ S+ ++MPCKH++H +C+LPWL +
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250
Query: 223 NSCPLCRRELPNEAND 238
NSCP+CR ELP + D
Sbjct: 251 NSCPVCRFELPTDDPD 266
>sp|Q7T0Q3|R126A_XENLA RING finger protein 126-A OS=Xenopus laevis GN=rnf126-a PE=2 SV=1
Length = 312
Score = 93.2 bits (230), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 110/269 (40%), Gaps = 51/269 (18%)
Query: 8 YWCYRCNRIIRIQSRTEDAIVCPDCHTGFIEQI-ETI---------------QRPSNERY 51
Y+C+ C I R + CP C +GFIE++ ET RPS E
Sbjct: 11 YFCHSC--TAEITPRLPE-YTCPRCDSGFIEELPETSRNSENNSSNNSRTDQNRPSFENL 67
Query: 52 PAAEMYLEDTQNPETF------------------PTTRFGRTRRNGGDRSPFNPVIVLRG 93
+A+ L TF TR G +RR R +
Sbjct: 68 ESAQFTLPSGYGQVTFGIFNEGLDFPIFGTSGPVEETRDGESRREHQSRQRYGARQPRAR 127
Query: 94 PQTPDSGGGNEGTAMERGNFELFYDD------ATGAGLRP---LPASMSDFLMGS-GFDR 143
T + G NEG G + + + G+ P L ++ D+ G+ G D
Sbjct: 128 LSTRRAAGRNEGVPTLEGIIQQLVNGIIAPTAMSNLGVGPWGVLHSNPMDYAWGANGLDT 187
Query: 144 VLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEARE 203
++ QL N PPA I+++P + I E HV C VCKE + + R+
Sbjct: 188 IITQL----LNQFENTGPPPADNEKIQALPTIQITEEHVGSGLECPVCKEDYTVGECVRQ 243
Query: 204 MPCKHIYHGECILPWLSMRNSCPLCRREL 232
+PC H++H +CI+PWL ++CP+CR+ L
Sbjct: 244 LPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
>sp|Q6DIP3|RN126_XENTR RING finger protein 126 OS=Xenopus tropicalis GN=rnf126 PE=2 SV=1
Length = 311
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 109/270 (40%), Gaps = 54/270 (20%)
Query: 8 YWCYRCNR--IIRIQSRTEDAIVCPDCHTGFIEQIETIQ---------------RPSNER 50
Y+C+ C I R+ T CP C +GFIE++ + RPS E
Sbjct: 11 YFCHSCTAEIIPRLPEYT-----CPRCDSGFIEELPETRNSENNSSNNSGTDQNRPSFEN 65
Query: 51 YPAAEMYLEDTQNPETF------------------PTTRFGRTRRNGGDRSPFNPVIVLR 92
+A+ L TF R G +RR R +
Sbjct: 66 LESAQFTLPSGYGQVTFGIFNEGLDFPIFGTSGPVEEPRDGESRREHQSRQRYGARQPRA 125
Query: 93 GPQTPDSGGGNEGTAMERGNFELFYDD------ATGAGLRP---LPASMSDFLMGS-GFD 142
T + G NEG G + + + G+ P L ++ D+ G+ G D
Sbjct: 126 RLSTRRAAGRNEGVPTLEGIIQQLVNGIIAPTAMSNLGVGPWGVLHSNPMDYAWGANGLD 185
Query: 143 RVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAR 202
++ QL N PPA I+++P + I E HV C VCKE + + R
Sbjct: 186 TIITQL----LNQFENTGPPPADTEKIQALPTIQITEEHVGSGLECPVCKEDYTVGESVR 241
Query: 203 EMPCKHIYHGECILPWLSMRNSCPLCRREL 232
++PC H++H +CI+PWL ++CP+CR+ L
Sbjct: 242 QLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 271
>sp|Q6IRP0|R126B_XENLA RING finger protein 126-B OS=Xenopus laevis GN=rnf126-b PE=2 SV=1
Length = 312
Score = 92.4 bits (228), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 112/275 (40%), Gaps = 63/275 (22%)
Query: 8 YWCYRCNRIIRIQSRTEDAIVCPDCHTGFIEQI-ETI---------------QRPSNERY 51
Y+C+ C I R + CP C +GFIE++ ET RPS E
Sbjct: 11 YFCHSC--TAEITPRLPE-YTCPRCDSGFIEELPETSRNSESNSSNNSGTDQNRPSFENI 67
Query: 52 PAAEMYLEDTQNPETF------------------PTTRFGRTRRNG------GDRSPFNP 87
+A+ L TF TR G +RR G R P
Sbjct: 68 ESAQFTLPSGYGQVTFGIFNEGLDFPMFGTSGPVEETRDGESRREHQSRQRYGARQPRAR 127
Query: 88 VIVLRGPQTPDSGGGNEGTAMERGNFELFYDD------ATGAGLRP---LPASMSDFLMG 138
+ RG G NEG G + + + G+ P L ++ D+ G
Sbjct: 128 MSTRRG------AGRNEGVPTLEGIIQQLVNGIIAPTAMSNLGVGPWGVLHSNPMDYAWG 181
Query: 139 S-GFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQL 197
+ G D ++ QL N PPA I+++P + I E HV C VCKE + +
Sbjct: 182 ANGLDTIITQL----LNQFENTGPPPADTDKIQALPTIQITEEHVGFGLECPVCKEDYTV 237
Query: 198 NSEAREMPCKHIYHGECILPWLSMRNSCPLCRREL 232
R++PC H++H +CI+PWL ++CP+CR+ L
Sbjct: 238 GESVRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSL 272
>sp|Q9BV68|RN126_HUMAN RING finger protein 126 OS=Homo sapiens GN=RNF126 PE=1 SV=1
Length = 326
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 113/276 (40%), Gaps = 64/276 (23%)
Query: 8 YWCYRCNRIIRIQSRTEDAIVCPDCHTGFIEQIETIQR-----------PSNERYPAAEM 56
Y+C+ C+ + I R D I CP C +GFIE++ R P+++ P E
Sbjct: 11 YFCHCCS--VEIVPRLPDYI-CPRCESGFIEELPEETRSTENGSAPSTAPTDQSRPPLEH 67
Query: 57 Y------------------LEDTQNPETFPT--------------TRFGRTRRNGGDRSP 84
+D+ TFP R +R G R P
Sbjct: 68 VDQHLFTLPQGYGQFAFGIFDDSFEIPTFPPGAQADDGRDPESRRERDHPSRHRYGARQP 127
Query: 85 FNPVIVLRGPQTPDSGGGNEGTAMERGNFELFYD----DATGAGLRP---LPASMSDFLM 137
+ R + G +EG G + + AT L P L ++ D+
Sbjct: 128 RARLTTRR------ATGRHEGVPTLEGIIQQLVNGIITPATIPSLGPWGVLHSNPMDYAW 181
Query: 138 GS-GFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQ 196
G+ G D ++ QL N PPA K I+++P V + E HV C VCK+ +
Sbjct: 182 GANGLDAIITQL----LNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYA 237
Query: 197 LNSEAREMPCKHIYHGECILPWLSMRNSCPLCRREL 232
L R++PC H++H CI+PWL +SCP+CR+ L
Sbjct: 238 LGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 273
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 92.0 bits (227), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 54/88 (61%)
Query: 151 LDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIY 210
D + + + PPA+KA ++S+PVV I+ K C VC F+ REMPCKH++
Sbjct: 42 FDLSDWDQRLPPPAAKAVVQSLPVVIISPEQADKGVKCPVCLLEFEEQESVREMPCKHLF 101
Query: 211 HGECILPWLSMRNSCPLCRRELPNEAND 238
H CILPWL+ NSCPLCR ELP + D
Sbjct: 102 HTGCILPWLNKTNSCPLCRLELPTDNAD 129
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 91.7 bits (226), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 112/272 (41%), Gaps = 54/272 (19%)
Query: 8 YWCYRCNRIIRIQSRTEDAIVCPDCHTGFIEQI-ETIQRPSNERYPA------------- 53
Y+C+ C+ + I R D I CP C +GFIE++ E + N P+
Sbjct: 11 YFCHCCS--VEIVPRLPDYI-CPRCESGFIEELPEETRNTENGSAPSTAPTDQNRQPFEN 67
Query: 54 AEMYL---------------EDTQNPETFPT--------------TRFGRTRRNGGDRSP 84
+ +L +D+ TFP R ++R G R P
Sbjct: 68 VDQHLFTLPQGYSQFAFGIFDDSFEIPTFPPGAQADDGRDPESRREREHQSRHRYGARQP 127
Query: 85 FNPVIVLRGPQTPDSGGGNEGTAMERGNFELFYDDATGAGLRP---LPASMSDFLMGS-G 140
+ R + EG + N + GL P L ++ D+ G+ G
Sbjct: 128 RARLTARRATGRHEGVPTLEGIIQQLVNGIISPAAVPSLGLGPWGVLHSNPMDYAWGANG 187
Query: 141 FDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSE 200
D ++ QL N PPA K I+++P V + E HV C VCKE + L
Sbjct: 188 LDTIITQL----LNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKEDYALGES 243
Query: 201 AREMPCKHIYHGECILPWLSMRNSCPLCRREL 232
R++PC H++H CI+PWL +SCP+CR+ L
Sbjct: 244 VRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSL 275
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 90.9 bits (224), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 107/254 (42%), Gaps = 47/254 (18%)
Query: 28 VCPDCHTGFIEQIET-----------IQRPSNERYPAAEMYLEDTQNPETF-------PT 69
+CP C +GFIE++ I + + +L+ T + F P
Sbjct: 37 ICPRCESGFIEEVTDDSSFLGGGGSRIDNTTTTHFAELWGHLDHTMFFQDFRPFLSSSPL 96
Query: 70 TRFGRTRRNGGD-----------RSPFNPVIVLRGPQTPDSGGGNEGTAMERGNFELFYD 118
+ R G R P RG PD EG + + F F+
Sbjct: 97 DQDNRANERGHQTHTDFWGARPPRLPLGRRYRSRGSSRPDRSPAIEG--ILQHIFAGFFA 154
Query: 119 DATGAGLRPLPASMS--------DFLMG-SGFDRVLDQLT-QLDFNGVTRFVNPPASKAA 168
++ G P P S S D+ G +G D ++ QL QL+ G PPA K
Sbjct: 155 NSAIPG-SPHPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGP-----PPADKEK 208
Query: 169 IESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLC 228
I S+P VT+ + V C VCKE + + E R++PC H +H CI+PWL + ++CP+C
Sbjct: 209 ITSLPTVTVTQEQVDMGLECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVC 268
Query: 229 RRELPNEANDRGSN 242
R+ L E + R S
Sbjct: 269 RKSLNGEDSTRQSQ 282
>sp|Q0II22|RN126_BOVIN RING finger protein 126 OS=Bos taurus GN=RNF126 PE=2 SV=1
Length = 313
Score = 90.5 bits (223), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 108/273 (39%), Gaps = 55/273 (20%)
Query: 8 YWCYRCNRIIRIQSRTEDAIVCPDCHTGFIEQI-ETIQRPSNERYPAAEMYLEDTQNP-- 64
Y+C+ C+ + I R D I CP C +GFIE++ E + N P+ + Q P
Sbjct: 11 YFCHCCS--VEIVPRLPDYI-CPRCESGFIEELPEETRSAENGSAPSTASADQSRQQPFE 67
Query: 65 ---------------------------ETFPT--------------TRFGRTRRNGGDRS 83
TFP R +R G R
Sbjct: 68 NVDQPLFTLPQGYGHFAFGIFDDSFEIPTFPPGAQADDSRDPESRREREQHSRHRYGARQ 127
Query: 84 PFNPVIVLRGPQTPDSGGGNEGTAMERGNFELFYDDATGAGLRP---LPASMSDFLMGS- 139
P + R + EG + N + GL P L ++ D+ G+
Sbjct: 128 PRARLTARRATGRHEGVPTLEGIIQQLVNGIITPATIPNLGLGPWGVLHSNPMDYAWGAN 187
Query: 140 GFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNS 199
G D ++ QL N PPA K I+++P V + E HV C VCK+ + L
Sbjct: 188 GLDAIITQL----LNQFENTGPPPADKEKIQALPTVPVTEEHVGSGLECPVCKDDYGLGE 243
Query: 200 EAREMPCKHIYHGECILPWLSMRNSCPLCRREL 232
R++PC H++H CI+PWL +SCP+CR+ L
Sbjct: 244 HVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSL 276
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 79/158 (50%), Gaps = 18/158 (11%)
Query: 92 RGPQTPDSGGGNEGTAMERGNFELFYDDATGAGLRPLPASMS--------DFLMG-SGFD 142
RG PD EG + F F+ ++ G P P S S D+ G +G D
Sbjct: 131 RGSTRPDRSPAIEGIIQQI--FAGFFANSAIPG-SPHPFSWSGMLHSNPGDYAWGQTGLD 187
Query: 143 RVLDQLT-QLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEA 201
++ QL QL+ G PPA K I S+P VT+ + V C VCKE + + +
Sbjct: 188 AIVTQLLGQLENTGP-----PPADKEKITSLPTVTVTQEQVNTGLECPVCKEDYTVEEKV 242
Query: 202 REMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDR 239
R++PC H +H CI+PWL + ++CP+CR+ L E + R
Sbjct: 243 RQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTR 280
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
Query: 137 MGSGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQ 196
+ SG D +D L +DF + + PPASK +ES+P VT+ C VC F+
Sbjct: 31 LLSGMD--ID-LGAVDFTEWDQRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFE 87
Query: 197 LNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEAND 238
R++PC+H++H CILPWL NSCPLCR ELP ++ D
Sbjct: 88 EGETVRQLPCEHLFHSACILPWLGKTNSCPLCRHELPTDSPD 129
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 137 MGSGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQ 196
+ SG D L LDF + + PPA+K +ES+P VT+ C VC F+
Sbjct: 31 LLSGMDI---DLGALDFTEWDQRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFE 87
Query: 197 LNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEA 236
R++PC+H++H CILPWL NSCPLCR ELP ++
Sbjct: 88 EGETVRQLPCEHLFHSSCILPWLGKTNSCPLCRHELPTDS 127
>sp|Q8RXD3|AIP2_ARATH E3 ubiquitin-protein ligase AIP2 OS=Arabidopsis thaliana GN=AIP2
PE=1 SV=1
Length = 310
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 139 SGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAK---ESHCAVCKEPF 195
+G D ++ + LD G R PPASK +E +PV+ E + K E+ C +CKE
Sbjct: 182 NGLDMIIPDI--LDDGGPPR--APPASKEVVEKLPVIIFTEELLKKFGAEAECCICKENL 237
Query: 196 QLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNE 235
+ + +E+PCKH +H C+ PWL NSCP+CR ELP +
Sbjct: 238 VIGDKMQELPCKHTFHPPCLKPWLDEHNSCPICRHELPTD 277
>sp|Q9CY62|RN181_MOUSE E3 ubiquitin-protein ligase RNF181 OS=Mus musculus GN=Rnf181 PE=2
SV=1
Length = 165
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 162 PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSM 221
PPA+KA +ES+P I S + C VC F+ EMPC H++H CILPWLS
Sbjct: 64 PPAAKAVVESLPRTVI--SSAKADLKCPVCLLEFEAEETVIEMPCHHLFHSNCILPWLSK 121
Query: 222 RNSCPLCRRELPNEAN 237
NSCPLCR ELP + +
Sbjct: 122 TNSCPLCRHELPTDDD 137
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 153 FNGVTRFVN-PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYH 211
NG+ + P ASK AI +PV I +S + C+VCKEP + + R +PCKH +H
Sbjct: 34 MNGIDMEIEVPEASKRAILELPVHEIVKSDEGGDLECSVCKEPAEEGQKYRILPCKHEFH 93
Query: 212 GECILPWLSMRNSCPLCRREL 232
ECIL WL NSCPLCR EL
Sbjct: 94 EECILLWLKKTNSCPLCRYEL 114
>sp|Q9SPL2|CIP8_ARATH E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana GN=CIP8
PE=1 SV=1
Length = 334
Score = 78.6 bits (192), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 162 PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSM 221
PPA+K+AIE++ ++ S CAVCK+ + +++PC H YHG+CI+PWL
Sbjct: 231 PPAAKSAIEALETFEVSSSEGEMVMVCAVCKDGMVMGETGKKLPCGHCYHGDCIVPWLGT 290
Query: 222 RNSCPLCRREL 232
RNSCP+CR +L
Sbjct: 291 RNSCPVCRFQL 301
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Query: 7 SYWCYRCNRIIRIQSRTEDAIVCPDCHTGFIEQIE 41
S+WCY CN+ + +++ +D +VC +C+ GF+E I+
Sbjct: 14 SHWCYHCNKRVVVET-LDDFVVCCECNKGFVESIQ 47
>sp|Q3T0W3|RN181_BOVIN E3 ubiquitin-protein ligase RNF181 OS=Bos taurus GN=RNF181 PE=2
SV=1
Length = 153
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 150 QLDFNGVTRFVN------PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEARE 203
++DF + V+ PPA+K A+E++P I S E C VC F+ A E
Sbjct: 34 RMDFEDLGLVVDWDHHLPPPAAKTAVENLPRTVIRGSQA--ELKCPVCLLEFEEEETAIE 91
Query: 204 MPCKHIYHGECILPWLSMRNSCPLCRRELPNEAN 237
MPC H++H CILPWLS NSCPLCR ELP + +
Sbjct: 92 MPCHHLFHSNCILPWLSKTNSCPLCRHELPTDDD 125
>sp|Q6AXU4|RN181_RAT E3 ubiquitin-protein ligase RNF181 OS=Rattus norvegicus GN=Rnf181
PE=1 SV=1
Length = 165
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 162 PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSM 221
PPA+KA +ES+P I S E C VC F+ EMPC H++H CILPWLS
Sbjct: 64 PPAAKAVVESLPRTVIRSS--KAELKCPVCLLEFEEEETVIEMPCHHLFHSNCILPWLSK 121
Query: 222 RNSCPLCRRELPNEAN 237
NSCPLCR ELP + +
Sbjct: 122 TNSCPLCRHELPTDDD 137
>sp|Q9P0P0|RN181_HUMAN E3 ubiquitin-protein ligase RNF181 OS=Homo sapiens GN=RNF181 PE=1
SV=1
Length = 153
Score = 75.5 bits (184), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 150 QLDFNGVTRFVN------PPASKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEARE 203
++DF + V+ PPA+K +E++P I S E C VC F+ A E
Sbjct: 34 RMDFEDLGLVVDWDHHLPPPAAKTVVENLPRTVIRGSQA--ELKCPVCLLEFEEEETAIE 91
Query: 204 MPCKHIYHGECILPWLSMRNSCPLCRRELPNEAN 237
MPC H++H CILPWLS NSCPLCR ELP + +
Sbjct: 92 MPCHHLFHSSCILPWLSKTNSCPLCRYELPTDDD 125
>sp|Q80U04|PJA2_MOUSE E3 ubiquitin-protein ligase Praja-2 OS=Mus musculus GN=Pja2 PE=1
SV=2
Length = 707
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 137 MGSGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVA--KESHCAVCKEP 194
+ + L L L + NPPASK +I+ +P + E H A +E C +C
Sbjct: 582 LAQAMETALAHLESLAVD--VEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSE 639
Query: 195 FQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDRGSNVGGGPD 248
+ + A E+PC H +H C+ WL +CP+CRR P D + PD
Sbjct: 640 YIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIDASAAASSDPD 693
>sp|Q63364|PJA2_RAT E3 ubiquitin-protein ligase Praja-2 OS=Rattus norvegicus GN=Pja2
PE=2 SV=1
Length = 707
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 137 MGSGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVA--KESHCAVCKEP 194
+ + L L L + NPPASK +I+ +P + E H A +E C +C
Sbjct: 582 LAQAMETALAHLESLAVD--VEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSE 639
Query: 195 FQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDRGSNVGGGPD 248
+ + A E+PC H +H C+ WL +CP+CRR P D + PD
Sbjct: 640 YIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPPAVIDASAAASSEPD 693
>sp|Q5R4R1|PJA2_PONAB E3 ubiquitin-protein ligase Praja-2 OS=Pongo abelii GN=PJA2 PE=2
SV=1
Length = 708
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 137 MGSGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVA--KESHCAVCKEP 194
+ + L L L + NPPASK +I+ +P + E H A +E C +C
Sbjct: 583 LAQAMETALAHLESLAVD--VEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSE 640
Query: 195 FQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELP 233
+ + A E+PC H +H C+ WL +CP+CRR P
Sbjct: 641 YIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 679
>sp|O43164|PJA2_HUMAN E3 ubiquitin-protein ligase Praja-2 OS=Homo sapiens GN=PJA2 PE=1
SV=4
Length = 708
Score = 70.9 bits (172), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 137 MGSGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVA--KESHCAVCKEP 194
+ + L L L + NPPASK +I+ +P + E H A +E C +C
Sbjct: 583 LAQAMETALAHLESLAVD--VEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSE 640
Query: 195 FQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELP 233
+ + A E+PC H +H C+ WL +CP+CRR P
Sbjct: 641 YIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFP 679
>sp|O55176|PJA1_MOUSE E3 ubiquitin-protein ligase Praja-1 OS=Mus musculus GN=Pja1 PE=1
SV=3
Length = 578
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 137 MGSGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESH--VAKESHCAVCKEP 194
+ + L L L + NPPASK +I+++P + + E H V +E C +C
Sbjct: 479 LAQAMETALAHLESLAVD--VEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSE 536
Query: 195 FQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELP 233
+ A E+PC H +H C+ WL +CP+CR P
Sbjct: 537 YVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 575
>sp|Q8NG27|PJA1_HUMAN E3 ubiquitin-protein ligase Praja-1 OS=Homo sapiens GN=PJA1 PE=1
SV=2
Length = 643
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 137 MGSGFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESH--VAKESHCAVCKEP 194
+ + L L L + NPPASK +I+++P + + E H V +E C +C
Sbjct: 544 LAQAMETALAHLESLAVD--VEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSE 601
Query: 195 FQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELP 233
+ A E+PC H +H C+ WL +CP+CR P
Sbjct: 602 YVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFP 640
>sp|Q9SN28|ATL7_ARATH RING-H2 finger protein ATL7 OS=Arabidopsis thaliana GN=ATL7 PE=2
SV=1
Length = 236
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 165 SKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMP-CKHIYHGECILPWLSMRN 223
SK E +PVV ES + K+S C+VC +Q + ++MP C H +H ECI WL+
Sbjct: 88 SKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHT 147
Query: 224 SCPLCRREL 232
+CPLCR L
Sbjct: 148 TCPLCRLSL 156
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Query: 134 DFLMGS-GFDRVLDQLTQLDFNGVTRFVNPPASKAAIESMPVVTIAESHVAKESHCAVCK 192
D+ G+ G D ++ QL + PA + I M V + + +E C +C
Sbjct: 344 DYAWGARGLDDIISQLME---QAQGHNAPAPAPEDVIAKMKVQKPPKELIDEEGECTICM 400
Query: 193 EPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCR 229
E F++N + ++PCKH +H CI PWL + +C +CR
Sbjct: 401 EMFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICR 437
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 164 ASKAAIESMPVVTIAESHVAKE---SHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLS 220
A+K AI + T+ + + HCAVC E ++ N R +PCKH++H C+ PWLS
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLS 296
Query: 221 MRNSCPLCRREL 232
+CP+C+ +
Sbjct: 297 EHCTCPMCKLNI 308
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 164 ASKAAIESMPVVTIAESHVAKE---SHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLS 220
A+K AI + T+ + + HCAVC E ++ N R +PCKH++H C+ PWLS
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLS 296
Query: 221 MRNSCPLCRREL 232
+CP+C+ +
Sbjct: 297 EHCTCPMCKLNI 308
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 65.1 bits (157), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 164 ASKAAIESMPVVTIAESHVAKE---SHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLS 220
A+K AI + T+ + + HCAVC E ++ N R +PCKH++H C+ PWLS
Sbjct: 237 AAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLS 296
Query: 221 MRNSCPLCRREL 232
+CP+C+ +
Sbjct: 297 EHCTCPMCKLNI 308
>sp|Q570X5|ATL58_ARATH RING-H2 finger protein ATL58 OS=Arabidopsis thaliana GN=ATL58 PE=2
SV=1
Length = 261
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 165 SKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMP-CKHIYHGECILPWLSMRN 223
SK E +P+V ES +S C+VC +Q N + +++P CKH +H +CI WL+
Sbjct: 77 SKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHT 136
Query: 224 SCPLCRREL 232
+CPLCR L
Sbjct: 137 TCPLCRLAL 145
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 164 ASKAAIESMPVVTIAESHVAKES---HCAVCKEPFQLNSEAREMPCKHIYHGECILPWLS 220
A+K AI + + TI + ES +CAVC E ++ N R +PC+H++H C+ PWL
Sbjct: 251 AAKKAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLL 310
Query: 221 MRNSCPLCRREL 232
+CP+C+ +
Sbjct: 311 DHRTCPMCKMNI 322
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 60.8 bits (146), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 164 ASKAAIESMPVVTIAESHVAKES---HCAVCKEPFQLNSEAREMPCKHIYHGECILPWLS 220
A+K AI + V TI + ES +CAVC E ++ N R +PC+H++H C+ PWL
Sbjct: 250 AAKKAISKLQVRTIRKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLL 309
Query: 221 MRNSCPLCRREL 232
+CP+C+ +
Sbjct: 310 DHRTCPMCKMNI 321
>sp|Q9SN27|ATL59_ARATH E3 ubiquitin-protein ligase ATL59 OS=Arabidopsis thaliana GN=ATL59
PE=1 SV=1
Length = 225
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 165 SKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMP-CKHIYHGECILPWLSMRN 223
SK E +P+V ES ++ C+VC +Q + ++MP C H +H ECI WL+
Sbjct: 74 SKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHT 133
Query: 224 SCPLCRREL 232
+CPLCR L
Sbjct: 134 TCPLCRLSL 142
>sp|Q3U2C5|RN149_MOUSE E3 ubiquitin-protein ligase RNF149 OS=Mus musculus GN=Rnf149 PE=2
SV=3
Length = 394
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 8/116 (6%)
Query: 165 SKAAIESMPVVTIAESHVAKE---SHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSM 221
+K I +P+ T+ + +CAVC E F++ R +PCKHI+H CI PWL
Sbjct: 239 TKKVIGQLPLHTVKHGEKGIDVDAENCAVCIENFKVKDVIRILPCKHIFHRICIDPWLLD 298
Query: 222 RNSCPLCRRELPNEANDRGSNVGGGPDETLGLTIWRLPGGGFAVGRFNGSRRAAER 277
+CP+C+ ++ + G P++T L G +VG + + + ER
Sbjct: 299 HRTCPMCKLDV-----IKALGYWGDPEDTQELPTPEAAPGRVSVGNLSVTSQDEER 349
>sp|Q566M8|RN150_DANRE RING finger protein 150 OS=Danio rerio GN=rnf150 PE=2 SV=1
Length = 419
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 164 ASKAAIESMPVVTIAESHVAKES---HCAVCKEPFQLNSEAREMPCKHIYHGECILPWLS 220
A+K AI + V TI + ES +CAVC E ++ N R +PC+H++H C+ PWL
Sbjct: 240 AAKKAISQLQVRTIRKGDQETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKCCVDPWLV 299
Query: 221 MRNSCPLCRREL 232
+CP+C+ +
Sbjct: 300 DHRTCPMCKMNI 311
>sp|Q20798|HRD1_CAEEL E3 ubiquitin-protein ligase hrd-1 OS=Caenorhabditis elegans
GN=sel-11 PE=3 SV=1
Length = 610
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
Query: 159 FVNPPASKAAIESM----PVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGEC 214
F++ S+ AI +M PVV+ AE A ++ C +C+E +++ + +PC H++H C
Sbjct: 260 FLDVILSRRAINAMNSQFPVVS-AEDLAAMDATCIICREEMTVDASPKRLPCSHVFHAHC 318
Query: 215 ILPWLSMRNSCPLCRREL 232
+ W + +CP CR ++
Sbjct: 319 LRSWFQRQQTCPTCRTDI 336
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 58.5 bits (140), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 7/83 (8%)
Query: 153 FNGVTRFVNPPASKAAIESMPVVTIAESH--VAKESHCAVCKEPFQLNSEAREMP-CKHI 209
F R +NP I S+P T+ + A + CAVC + +ARE+P CKHI
Sbjct: 75 FEMPKRGLNP----TVIASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHI 130
Query: 210 YHGECILPWLSMRNSCPLCRREL 232
+H +C+ WL+ ++CP+CR E+
Sbjct: 131 FHVDCVDTWLTTCSTCPVCRTEV 153
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 58.5 bits (140), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)
Query: 167 AAIESMPVV---TIAESHV-AKESHCAVCKEPFQLNSEAREMP-CKHIYHGECILPWLSM 221
A +ES PV ++ ES + +K+ CA+C + + R +P C H++H +CI WL
Sbjct: 99 AVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYS 158
Query: 222 RNSCPLCRRELPNEANDRGSNVGGGP 247
+CP+CR L ++N G G P
Sbjct: 159 HATCPVCRSNLTAKSNKPGDEDDGVP 184
>sp|Q7TMV1|RN139_MOUSE E3 ubiquitin-protein ligase RNF139 OS=Mus musculus GN=Rnf139 PE=1
SV=1
Length = 668
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 154 NGVTRFVNPPASKAAIESMPVVTIAESHVAK-ESHCAVCKEPFQLNSEAREMPCKHIYHG 212
NG F+N + I S+P I SH+ + + CA+C F + AR PC H +H
Sbjct: 514 NGWKTFMNRRTAVKKINSLP--EIKGSHLQEIDDVCAICYHEF--TTSARITPCNHYFHA 569
Query: 213 ECILPWLSMRNSCPLCRR------ELPNEANDRGSNVGGGPDE 249
C+ WL ++++CP+C + E+ + +N +N P+E
Sbjct: 570 LCLRKWLYIQDTCPMCHQKVYIEDEIKDNSNASNNNGFIAPNE 612
>sp|Q8L649|BB_ARATH E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1
SV=1
Length = 248
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 188 CAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRREL 232
C +C+ +++ +PCKH+YH ECI WLS+ CP+C E+
Sbjct: 197 CVICQLKYKIGERQMNLPCKHVYHSECISKWLSINKVCPVCNSEV 241
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 165 SKAAIESMPVVTI-AESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRN 223
+KA IE +P +SH ++++ C VC F++ R +PC H +H +C+ WL
Sbjct: 331 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 390
Query: 224 SCPLCR---RELPNEAN 237
+CP+CR E+P EA
Sbjct: 391 TCPICRADASEVPREAE 407
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 165 SKAAIESMPVVTI-AESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRN 223
+KA IE +P +SH ++++ C VC F++ R +PC H +H +C+ WL
Sbjct: 274 TKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANR 333
Query: 224 SCPLCR---RELPNEAN 237
+CP+CR E+P EA
Sbjct: 334 TCPICRADASEVPREAE 350
>sp|Q6NRX0|RN149_XENLA E3 ubiquitin-protein ligase RNF149 OS=Xenopus laevis GN=rnf149 PE=2
SV=1
Length = 397
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 187 HCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDRGSNVGGG 246
+CAVC E ++ R +PCKHI+H CI PWL +CP+C+ ++ +
Sbjct: 263 NCAVCIENYKTKDLVRILPCKHIFHRLCIDPWLIEHRTCPMCKLDVI-----KALGFWVE 317
Query: 247 PDETLGLTI-WRLPGGGFAVGRFNGSRRAAERE 278
P+ETL + + + G ++G + ++ + E
Sbjct: 318 PEETLDIHVPDSIAGSSLSIGTVSITQEESRSE 350
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 165 SKAAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNS 224
+K I+++ + + E+ K C+VC + ++ R++PC H YH CI WLS ++
Sbjct: 549 TKEQIDNLAMRSFGENDALKT--CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENST 606
Query: 225 CPLCRREL 232
CP+CRR +
Sbjct: 607 CPICRRAV 614
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 167 AAIESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMP-CKHIYHGECILPWLSMRNSC 225
+ I+S+P+ T + C+VC F+ N R MP CKH +H CI W +SC
Sbjct: 55 SIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSC 114
Query: 226 PLCRREL 232
PLCR ++
Sbjct: 115 PLCRSQI 121
>sp|Q8GUU2|RIE1_ARATH E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1
PE=2 SV=1
Length = 359
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 182 VAKESHCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRRELPNEANDRG 240
+A+++ C +C ++ +E +PC H +H CI+ WL MR +CPLC+ + D+
Sbjct: 301 LAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWLKMRATCPLCKYNILKGTTDQS 359
>sp|Q84TF5|RHA4A_ARATH RING-H2 zinc finger protein RHA4a OS=Arabidopsis thaliana GN=RHA4A
PE=2 SV=1
Length = 174
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 170 ESMPVVTIAESHVAKESHCAVCKEPFQLNSEAREMP-CKHIYHGECILPWLSMRNSCPLC 228
+ + VV E ++S C VC F+L E EMP CKHI+H +CI WL N+CPLC
Sbjct: 87 DKLHVVLFNEELGTRDSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLC 146
Query: 229 R 229
R
Sbjct: 147 R 147
>sp|Q8NC42|RN149_HUMAN E3 ubiquitin-protein ligase RNF149 OS=Homo sapiens GN=RNF149 PE=2
SV=2
Length = 400
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 187 HCAVCKEPFQLNSEAREMPCKHIYHGECILPWLSMRNSCPLCRREL 232
+CAVC E F++ R +PCKHI+H CI PWL +CP+C+ ++
Sbjct: 268 NCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDV 313
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.138 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,670,959
Number of Sequences: 539616
Number of extensions: 7096288
Number of successful extensions: 13946
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 318
Number of HSP's successfully gapped in prelim test: 123
Number of HSP's that attempted gapping in prelim test: 13519
Number of HSP's gapped (non-prelim): 488
length of query: 374
length of database: 191,569,459
effective HSP length: 119
effective length of query: 255
effective length of database: 127,355,155
effective search space: 32475564525
effective search space used: 32475564525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)