BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017273
         (374 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q53B70|CF1B2_SOYBN Chalcone--flavonone isomerase 1B-2 OS=Glycine max GN=CHI1B2 PE=2
           SV=1
          Length = 226

 Score = 32.7 bits (73), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 37/153 (24%), Positives = 64/153 (41%), Gaps = 28/153 (18%)

Query: 230 SSSTSEVLVGTGSRTIKIVKIKSLKVYAFAFYVHPRSVCEKLGPKYASISVAELNKCGGF 289
           +S+ S  L G G R + I + + +K      Y+  ++V   LG K+   S AEL     F
Sbjct: 25  ASTKSYFLGGAGVRGLNIQE-EFVKFTGIGVYLEDKAVS-SLGAKWKGKSAAELLDSLDF 82

Query: 290 YEDLLREDIDMTVRLVINCNGMKVNAVKDVFEKSLRARLEKANPNTDYHCLESFGSYFS- 348
           Y D+++   +  +R      G K+  +        R  + K + N   H +ES G+Y   
Sbjct: 83  YRDIIKGPFEKLIR------GSKLRTLDG------REYVRKVSENCVAH-MESVGTYSEA 129

Query: 349 ------------KDIPLPLGTVINFRRTAAGQL 369
                       KD   P G+ + ++++  G L
Sbjct: 130 EEKAIEEFRNAFKDQNFPPGSTVFYKQSPTGTL 162


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.134    0.395 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,732,821
Number of Sequences: 539616
Number of extensions: 5264152
Number of successful extensions: 12360
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 12358
Number of HSP's gapped (non-prelim): 13
length of query: 374
length of database: 191,569,459
effective HSP length: 119
effective length of query: 255
effective length of database: 127,355,155
effective search space: 32475564525
effective search space used: 32475564525
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)