Query 017276
Match_columns 374
No_of_seqs 178 out of 804
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 11:50:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017276.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017276hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2gak_A Beta-1,6-N-acetylglucos 100.0 6.3E-52 2.1E-56 415.7 16.2 252 55-356 79-374 (391)
2 4fix_A UDP-galactofuranosyl tr 40.4 34 0.0011 35.8 5.8 112 57-174 177-297 (657)
3 1qg8_A Protein (spore coat pol 39.7 1.8E+02 0.0061 24.9 10.2 111 60-178 1-122 (255)
4 2fy7_A Beta-1,4-galactosyltran 35.3 93 0.0032 28.7 7.5 77 59-163 64-146 (287)
5 3ckj_A Putative uncharacterize 22.0 4.5E+02 0.015 23.9 11.6 111 57-178 45-166 (329)
6 1iio_A Conserved hypothetical 14.4 49 0.0017 25.4 0.7 21 152-172 60-80 (84)
7 2z86_A Chondroitin synthase; G 14.1 7.4E+02 0.025 24.5 9.9 101 60-174 93-203 (625)
8 4hg6_A Cellulose synthase subu 9.2 8.7E+02 0.03 25.4 8.7 43 57-99 137-182 (802)
9 2z86_A Chondroitin synthase; G 8.5 1.4E+03 0.046 22.5 10.1 103 58-174 373-483 (625)
10 3fxd_A Protein ICMQ; helix bun 8.3 1.9E+02 0.0063 20.5 1.9 20 130-149 9-28 (57)
No 1
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=100.00 E-value=6.3e-52 Score=415.70 Aligned_cols=252 Identities=15% Similarity=0.155 Sum_probs=194.2
Q ss_pred CCCCCCeEEEEEEecCCCChHHHHHHHHhHhcCCCeEEEEEeCCCCccc--ccc-ccCccccccc-cCCcceeecCCccH
Q 017276 55 HYDGPAKIAFLFLARRELPLDFLWGSFFEIADVENFSIFIHSAPGFVFD--ELT-TRSKFFYGRQ-LSNSIQVAWGESSM 130 (374)
Q Consensus 55 ~~~~~~KiAfLilah~~~~~~~l~~rl~~~ld~~~~~IyIHvD~k~~~~--~~~-~~s~vf~~r~-i~~rv~V~WG~~Sl 130 (374)
+.+.++||||||++|+++++ |++|+++++++++.||||+|+++... ... ....+|.|+. +++++.|.|||+||
T Consensus 79 ~~e~~~kiAflil~h~d~~~---l~rll~~ly~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~NV~v~~~~~~v~WGg~S~ 155 (391)
T 2gak_A 79 KEEVGFPIAYSIVVHHKIEM---LDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIASCFDNVFVASQLESVVYASWTR 155 (391)
T ss_dssp HHHHTSCEEEEEEECSCHHH---HHHHHHHHCCTTSEEEEEECTTSCHHHHHHHHHHHHTCTTEEECSSCCCCCTTSHHH
T ss_pred ccccCCCEEEEEEecCCHHH---HHHHHHHHhCCCCeEEEEEeCCCCHHHHHHHHHHHhcCCCEEEeccCcccccCCchH
Confidence 34667999999999999877 99999999999999999999997532 111 1122344444 45799999999999
Q ss_pred HHHHHHHHHHHhcC-CCCCEEEEecCCcccCCChHHHHHHHhcC-CCCceeccccC--CcCccc--CC-----C------
Q 017276 131 IAAERLLLEAALED-PANQRFVLLSDSCVPIYNFSYVYKYLMAS-PRSFVDSFLDR--KESRYN--PK-----M------ 193 (374)
Q Consensus 131 V~A~l~Ll~~AL~d-~~~~yfiLLSgsd~PL~s~~~I~~~L~~~-~~sFI~~~~~~--~~~Ry~--~~-----m------ 193 (374)
|+|+++||+.||++ ++|+|||||||+|+||+|+++|++||+.+ ++|||+++.++ +..|+. .. +
T Consensus 156 v~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~~~~~nFIe~~~~~~~~~~R~~~~~~~~~~~l~~~~~~ 235 (391)
T 2gak_A 156 VKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKCSTGENNLETEKMPPNKEERWKKRYAVVDGKLTNTGIV 235 (391)
T ss_dssp HHHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHHTTTCCBCCBEECCGGGSHHHHEEEEEETTEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHhcCCCceeeccCCCcccccceEeeeeccccceeeeccc
Confidence 99999999999985 59999999999999999999999999986 59999987643 234432 11 0
Q ss_pred CCCCC-CCcccccCceeeecHHHHHHhhcccchhHHHHhhhcCCCCCcccccchhhhcccccccccChhHHHHHHhccCC
Q 017276 194 SPTIP-KGKWRKGSQWITLIRRHAEVIVDDEIIFPVFKKCCKRRPPLDARKGKMNMKLQKQHNCIPDEHYVQTLLAMSEL 272 (374)
Q Consensus 194 ~p~ip-~~~~~~GSqW~sLtR~~ae~Il~~~~i~~~f~~~c~~~~~~~~~~~~~~~~~~~~~t~~PDE~ffqTLL~ns~~ 272 (374)
...+| ..++++|||||+|||++|++|++|.. .+.|.+ +++++|+|||+|||||+.++++
T Consensus 236 k~~~P~~~~~~~GSqW~~LtR~~v~~vl~d~~-~~~~~~-------------------~~k~t~~pDE~ffqTll~~~~~ 295 (391)
T 2gak_A 236 KAPPPLKTPLFSGSAYFVVTREYVGYVLENEN-IQKLME-------------------WAQDTYSPDEFLWATIQRIPEV 295 (391)
T ss_dssp CCCCSCSSCCEECCSCCEEEHHHHHHHHHCHH-HHHHHH-------------------HHTTSSSGGGTHHHHHTTSTTS
T ss_pred ccCCccccceecccceeEecHHHHHHHHhCCc-HHHHHH-------------------HHcCCcCCchhHHHHHhhccCC
Confidence 12234 47899999999999999999999743 444544 5667999999999999998765
Q ss_pred cCcc----------ccCCceEEecCCCCCC--CCCCCCc----------ccccCCCChHHHHHHHhccccccccccceee
Q 017276 273 EGEL----------ERRTLTYTQWNLSTTG--NQNWHPL----------TFSYANAGPQQIKEIKSINHVYYETEFRTEW 330 (374)
Q Consensus 273 ~~~i----------~~~~lryi~W~~~~~~--~~~~hP~----------~~~~~D~~~~~l~~i~~~~~~~~~~~~~~~~ 330 (374)
.+.+ +++++|||+|+...|+ .++.||. +|+.+|+ +.|++
T Consensus 296 pg~~~~~~~~~~~~~~~~lr~i~W~~~~g~~~~G~p~p~c~~~~~~~~C~~~~~Dl-----~~l~~-------------- 356 (391)
T 2gak_A 296 PGSFPSSNKYDLSDMNAIARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGAGDL-----SWMLR-------------- 356 (391)
T ss_dssp TTCCCSSGGGCBCTTTSSSEEECBTTTCSCGGGTCSSCCCSSEEETTEEECCGGGH-----HHHTT--------------
T ss_pred CCccccccccccccccCceEEEEecccCCccccCCCCCCCccceecceeeecHHHH-----HHHHh--------------
Confidence 4433 4789999999853221 1134666 7887776 66665
Q ss_pred eecCCcCCCCceEeeCCCchhHHHHH
Q 017276 331 CRSNSIIVPCFLFARKFSRGAAMRLL 356 (374)
Q Consensus 331 c~~~~~~~~~~lFARKFd~~~~~~ll 356 (374)
+++||||||+++++..+|
T Consensus 357 --------s~~lFARKF~~~~d~~~l 374 (391)
T 2gak_A 357 --------QHHLFANKFDMDVDPFAI 374 (391)
T ss_dssp --------SCCSEEECCCTTTCHHHH
T ss_pred --------CCCceEEccCCccCHHHH
Confidence 368999999987776655
No 2
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=40.42 E-value=34 Score=35.77 Aligned_cols=112 Identities=11% Similarity=-0.031 Sum_probs=63.1
Q ss_pred CCCCeEEEEEEecCCCChHHHHHHHHhHhcCC------CeEEEEEeCCCCcccccccc-CccccccccCCcceeec-CCc
Q 017276 57 DGPAKIAFLFLARRELPLDFLWGSFFEIADVE------NFSIFIHSAPGFVFDELTTR-SKFFYGRQLSNSIQVAW-GES 128 (374)
Q Consensus 57 ~~~~KiAfLilah~~~~~~~l~~rl~~~ld~~------~~~IyIHvD~k~~~~~~~~~-s~vf~~r~i~~rv~V~W-G~~ 128 (374)
..++|++.+|.+++.... +.+.++++-.. .+.| |=||.++........ ..+. .....++.+.. +..
T Consensus 177 ~~~pkVSVVIptYN~~~~---L~~~L~SL~~qt~~~~~~~EI-IVVDNgStD~s~~~~~~e~~--~~~~~~I~vI~~~N~ 250 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPAD---CVNALRELTADPLVDQVIGAV-IVPDQGERKVRDHPDFPAAA--ARLGSRLSIHDQPNL 250 (657)
T ss_dssp CSCCCEEEECCBSSCHHH---HHHHHHHHTTSHHHHTTEEEE-EEEECSSSCGGGSTTHHHHH--HHHGGGEEEEECCCC
T ss_pred CCCCeEEEEEEecCCHHH---HHHHHHHHHcCccccCCCCEE-EEEECcCCCccchHHHHHHH--HhcCCCEEEEECCCC
Confidence 456899999999998765 77777776432 2233 556766531100000 0000 00011222222 234
Q ss_pred cHHHHHHHHHHHHhcCCCCCEEEEecCCcccCCC-hHHHHHHHhcCC
Q 017276 129 SMIAAERLLLEAALEDPANQRFVLLSDSCVPIYN-FSYVYKYLMASP 174 (374)
Q Consensus 129 SlV~A~l~Ll~~AL~d~~~~yfiLLSgsd~PL~s-~~~I~~~L~~~~ 174 (374)
+.-.|--.+++.|....+.+|+++|-+.+++-.. .+.+.+++..++
T Consensus 251 G~a~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~ 297 (657)
T 4fix_A 251 GGSGGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAK 297 (657)
T ss_dssp HHHHHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBS
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCC
Confidence 4556777788888876578999999888877532 234555555554
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=39.72 E-value=1.8e+02 Score=24.90 Aligned_cols=111 Identities=10% Similarity=0.154 Sum_probs=58.5
Q ss_pred CeEEEEEEecCCCCh-HHHHHHHHhHhcCCCeEEEEEeCCCCcc-----ccccccCccccccccCCc---ceeecCCccH
Q 017276 60 AKIAFLFLARRELPL-DFLWGSFFEIADVENFSIFIHSAPGFVF-----DELTTRSKFFYGRQLSNS---IQVAWGESSM 130 (374)
Q Consensus 60 ~KiAfLilah~~~~~-~~l~~rl~~~ld~~~~~IyIHvD~k~~~-----~~~~~~s~vf~~r~i~~r---v~V~WG~~Sl 130 (374)
|++..+|.+++.... .+.++.+.+.. .+.+.|.|=-|...+- .......++.+ +... ....+...+.
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~-~~~~eiivvDd~S~d~t~~~~~~~~~~~~i~~---i~~~~~~~~~~~~n~G~ 76 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQT-FSDFELFIMDDNSNEETLNVIRPFLNDNRVRF---YQSDISGVKERTEKTRY 76 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCS-CCCEEEEEEECSCCHHHHHHHGGGGGSTTEEE---EECCCCSHHHHHSSCHH
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhcc-CCceEEEEEECCCCchHHHHHHHHhhcCCEEE---EecccccccccccccCH
Confidence 679999999998765 33444444332 3466766654443321 11001112211 1100 0001134556
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEecCCcccCCC-hHHHHHHHhcCC-CCce
Q 017276 131 IAAERLLLEAALEDPANQRFVLLSDSCVPIYN-FSYVYKYLMASP-RSFV 178 (374)
Q Consensus 131 V~A~l~Ll~~AL~d~~~~yfiLLSgsd~PL~s-~~~I~~~L~~~~-~sFI 178 (374)
..|--.+++.| ..+|+++|.+.|++--. .+.+.+.+.+++ ...+
T Consensus 77 ~~a~N~gi~~a----~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v 122 (255)
T 1qg8_A 77 AALINQAIEMA----EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVI 122 (255)
T ss_dssp HHHHHHHHHHC----CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEE
T ss_pred HHHHHHHHHHc----CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEE
Confidence 66766667665 45899999999887543 344556666654 4444
No 4
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=35.30 E-value=93 Score=28.68 Aligned_cols=77 Identities=14% Similarity=0.159 Sum_probs=46.8
Q ss_pred CCeEEEEEEecCCCChHHHHHHHHhHhc------CCCeEEEEEeCCCCccccccccCccccccccCCcceeecCCccHHH
Q 017276 59 PAKIAFLFLARRELPLDFLWGSFFEIAD------VENFSIFIHSAPGFVFDELTTRSKFFYGRQLSNSIQVAWGESSMIA 132 (374)
Q Consensus 59 ~~KiAfLilah~~~~~~~l~~rl~~~ld------~~~~~IyIHvD~k~~~~~~~~~s~vf~~r~i~~rv~V~WG~~SlV~ 132 (374)
.++++.+|-+++.... +.+.++++. ...+.|+|--| ..+ ++++...
T Consensus 64 ~~~VSIIIP~yN~~~~---L~~~L~sl~~~l~q~~~~~EIiVVdd-s~d------------------------~~f~~a~ 115 (287)
T 2fy7_A 64 PHKVAIIIPFRNRQEH---LKYWLYYLHPVLQRQQLDYGIYVINQ-AGD------------------------TIFNRAK 115 (287)
T ss_dssp SCEEEEEEEESSCHHH---HHHHHHHHHHHHHHTTCEEEEEEEEE-CSS------------------------SCCCHHH
T ss_pred CCcEEEEEeeCCCHHH---HHHHHHHHHHHHHHhcCCceEEEEEe-CCC------------------------Cccchhh
Confidence 4799999999998754 444444432 34666664222 110 1122233
Q ss_pred HHHHHHHHHhcCCCCCEEEEecCCcccCCCh
Q 017276 133 AERLLLEAALEDPANQRFVLLSDSCVPIYNF 163 (374)
Q Consensus 133 A~l~Ll~~AL~d~~~~yfiLLSgsd~PL~s~ 163 (374)
|.=..+..|++....+|++++-+.|+|....
T Consensus 116 a~N~G~~~al~~A~gd~i~flD~D~i~~~d~ 146 (287)
T 2fy7_A 116 LLNVGFQEALKDYDYTCFVFSDVDLIPMNDH 146 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEEECTTEEESBTT
T ss_pred hhhhHHHHHHHhCCCCEEEEECCCcccCCCc
Confidence 3333444455555789999999999998774
No 5
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=22.02 E-value=4.5e+02 Score=23.90 Aligned_cols=111 Identities=13% Similarity=0.018 Sum_probs=58.8
Q ss_pred CCCCeEEEEEEecCCCCh-HHHHHHHHhHhcCCCeEEEEEeCCCCccc--cccc--cCccccccccCCccee---ecCCc
Q 017276 57 DGPAKIAFLFLARRELPL-DFLWGSFFEIADVENFSIFIHSAPGFVFD--ELTT--RSKFFYGRQLSNSIQV---AWGES 128 (374)
Q Consensus 57 ~~~~KiAfLilah~~~~~-~~l~~rl~~~ld~~~~~IyIHvD~k~~~~--~~~~--~s~vf~~r~i~~rv~V---~WG~~ 128 (374)
...|++..+|-+++.... ...++.+.+......+.|.| +|.++.-. +... ...+ + .++.+ .=...
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiiv-VDdgS~D~t~~~~~~~~~~~-----~-~~~~~~~~~~~n~ 117 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIV-LDSGSTDDTEIRAVAAGARV-----V-SREQALPEVPIRP 117 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEE-EECSCCSSHHHHHHHTTCEE-----E-EHHHHCTTSCCCC
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEE-EeCCCCchHHHHHHHhhhhh-----c-cceeeeccCCCCC
Confidence 345899999999998754 44444444443222477777 55544211 0000 0111 0 11111 11223
Q ss_pred cHHHHHHHHHHHHhcCCCCCEEEEecCCcccCC--ChHHHHHHHhcCC-CCce
Q 017276 129 SMIAAERLLLEAALEDPANQRFVLLSDSCVPIY--NFSYVYKYLMASP-RSFV 178 (374)
Q Consensus 129 SlV~A~l~Ll~~AL~d~~~~yfiLLSgsd~PL~--s~~~I~~~L~~~~-~sFI 178 (374)
+...|.-.+++.| .-+|+++|.+.|.++. -...+.+.|.+++ ...+
T Consensus 118 G~~~a~n~g~~~a----~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v 166 (329)
T 3ckj_A 118 GKGEALWRSLAAS----RGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLV 166 (329)
T ss_dssp SHHHHHHHHHHHC----CCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEE
T ss_pred CHHHHHHHHHHhC----CCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEE
Confidence 3566666666665 3478888888887333 2355666665554 4444
No 6
>1iio_A Conserved hypothetical protein MTH865; 4-helical bundle, monomer, structural genomics, unknown function; NMR {Methanothermobacterthermautotrophicus str} SCOP: a.39.4.1
Probab=14.38 E-value=49 Score=25.37 Aligned_cols=21 Identities=14% Similarity=0.175 Sum_probs=17.5
Q ss_pred EecCCcccCCChHHHHHHHhc
Q 017276 152 LLSDSCVPIYNFSYVYKYLMA 172 (374)
Q Consensus 152 LLSgsd~PL~s~~~I~~~L~~ 172 (374)
+|.++|||+++.+++.+-+..
T Consensus 60 ll~~~DFP~ksA~~lAd~iv~ 80 (84)
T 1iio_A 60 VLTADDFPFKSAEEVADTIVN 80 (84)
T ss_dssp GSCGGGSBCSHHHHHHHHHHH
T ss_pred hCCcccCCCCCHHHHHHHHHH
Confidence 577899999999998877653
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=14.08 E-value=7.4e+02 Score=24.52 Aligned_cols=101 Identities=10% Similarity=0.052 Sum_probs=55.3
Q ss_pred CeEEEEEEecCCCChHHHHHHHHhHhc----CCCeEEEEEeCCCCccc-----cccccCccccccccCCcceeecCCccH
Q 017276 60 AKIAFLFLARRELPLDFLWGSFFEIAD----VENFSIFIHSAPGFVFD-----ELTTRSKFFYGRQLSNSIQVAWGESSM 130 (374)
Q Consensus 60 ~KiAfLilah~~~~~~~l~~rl~~~ld----~~~~~IyIHvD~k~~~~-----~~~~~s~vf~~r~i~~rv~V~WG~~Sl 130 (374)
|++..+|.+++.... +.+.++++- ...+.|+|--|...+-. .......+.+ + ...-.+.+.
T Consensus 93 p~vsviIp~~n~~~~---l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~~~i~~---i----~~~~~~~g~ 162 (625)
T 2z86_A 93 DGLSIVIPTYNRAKI---LAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESLLNIKY---V----RQKDYGYQL 162 (625)
T ss_dssp CCEEEEEEESSCHHH---HHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTTSCEEE---E----EECCCSCCH
T ss_pred CcEEEEEecCCcHHH---HHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhcCCeEE---E----EeCCCCcch
Confidence 789999999998643 555555542 23677776555443210 0000111111 1 111234456
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEecCCcccCCCh-HHHHHHHhcCC
Q 017276 131 IAAERLLLEAALEDPANQRFVLLSDSCVPIYNF-SYVYKYLMASP 174 (374)
Q Consensus 131 V~A~l~Ll~~AL~d~~~~yfiLLSgsd~PL~s~-~~I~~~L~~~~ 174 (374)
..|--.+++.| ..++++++-..++|-... ..+.+.+..++
T Consensus 163 ~~a~N~g~~~a----~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~ 203 (625)
T 2z86_A 163 CAVRNLGLRAA----KYNYVAILDCDMAPNPLWVQSYMELLAVDD 203 (625)
T ss_dssp HHHHHHHHHHC----CSSEEEEECTTEEECTTHHHHHHHHHHHCT
T ss_pred hHHHHHHHHhC----CcCEEEEECCCCCCCHHHHHHHHHHHhcCC
Confidence 66666666665 458899998888874332 33555555544
No 8
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=9.22 E-value=8.7e+02 Score=25.41 Aligned_cols=43 Identities=7% Similarity=0.077 Sum_probs=26.0
Q ss_pred CCCCeEEEEEEecCCCC-h-HHHHHHHHhHhc-CCCeEEEEEeCCC
Q 017276 57 DGPAKIAFLFLARRELP-L-DFLWGSFFEIAD-VENFSIFIHSAPG 99 (374)
Q Consensus 57 ~~~~KiAfLilah~~~~-~-~~l~~rl~~~ld-~~~~~IyIHvD~k 99 (374)
+..|++..+|-+++..+ . ++.++.+.+.-+ ++.+.|+|=-|..
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgS 182 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGG 182 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTC
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCC
Confidence 44579999999998774 3 334444443221 1236787766644
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=8.50 E-value=1.4e+03 Score=22.52 Aligned_cols=103 Identities=7% Similarity=-0.068 Sum_probs=54.5
Q ss_pred CCCeEEEEEEecCCCCh-HHHHHHHHhHhcCCCeEEEEEeCCCCccc-----ccc-ccCccccccccCCcceeecCCccH
Q 017276 58 GPAKIAFLFLARRELPL-DFLWGSFFEIADVENFSIFIHSAPGFVFD-----ELT-TRSKFFYGRQLSNSIQVAWGESSM 130 (374)
Q Consensus 58 ~~~KiAfLilah~~~~~-~~l~~rl~~~ld~~~~~IyIHvD~k~~~~-----~~~-~~s~vf~~r~i~~rv~V~WG~~Sl 130 (374)
..|+++.+|.+++.... ...++.+++.. ...+.|.|--|...+-. +.. ....+.+ +. -...+.
T Consensus 373 ~~~~vsiii~~yn~~~~l~~~l~s~~~q~-~~~~eiivvdd~S~d~t~~~~~~~~~~~~~i~~---~~------~~n~G~ 442 (625)
T 2z86_A 373 RVPLVSIYIPAYNCSKYIVRCVESALNQT-ITDLEVCICDDGSTDDTLRILQEHYANHPRVRF---IS------QKNKGI 442 (625)
T ss_dssp SSCSEEEEEEESSCTTTHHHHHHHHHSSS-CCSEEEEEEEESCSSSHHHHHHHHHTTCTTEEE---EE------ECCCCH
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHHHHhCc-CCCeEEEEEECcCChhHHHHHHHHHhhCCcEEE---Ee------CCCCCH
Confidence 35789999999998765 33344444332 35677777555443210 000 1112211 11 122345
Q ss_pred HHHHHHHHHHHhcCCCCCEEEEecCCcccCCCh-HHHHHHHhcCC
Q 017276 131 IAAERLLLEAALEDPANQRFVLLSDSCVPIYNF-SYVYKYLMASP 174 (374)
Q Consensus 131 V~A~l~Ll~~AL~d~~~~yfiLLSgsd~PL~s~-~~I~~~L~~~~ 174 (374)
..|--.+++.| ..+|+++|-+.|++--.. +.+.+.+.+++
T Consensus 443 ~~a~n~g~~~a----~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~ 483 (625)
T 2z86_A 443 GSASNTAVRLC----RGFYIGQLDSDDFLEPDAVELCLDEFRKDL 483 (625)
T ss_dssp HHHHHHHHHHC----CSSEEEECCTTCEECTTHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhc----CCCEEEEECCCcccChhHHHHHHHHHHhCC
Confidence 56666666665 458899998888863332 22344454444
No 10
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=8.30 E-value=1.9e+02 Score=20.46 Aligned_cols=20 Identities=15% Similarity=0.034 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhcCCCCCE
Q 017276 130 MIAAERLLLEAALEDPANQR 149 (374)
Q Consensus 130 lV~A~l~Ll~~AL~d~~~~y 149 (374)
+.+|.|..|.+|++.++|+.
T Consensus 9 q~~aILkaLdeaIe~GPWe~ 28 (57)
T 3fxd_A 9 QKETILKALNDAIEKGPWDK 28 (57)
T ss_dssp HHHHHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHHHHHHcCCchH
Confidence 67899999999999888863
Done!