Query 017284
Match_columns 374
No_of_seqs 424 out of 2385
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 07:13:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017284.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017284hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1378 Purple acid phosphatas 100.0 1.4E-71 3.1E-76 524.8 32.1 336 24-371 8-355 (452)
2 PLN02533 probable purple acid 100.0 8E-68 1.7E-72 515.9 38.4 329 26-370 13-344 (427)
3 cd00839 MPP_PAPs purple acid p 100.0 3.3E-37 7.1E-42 289.5 22.0 206 159-370 2-215 (294)
4 COG3540 PhoD Phosphodiesterase 100.0 1.2E-30 2.6E-35 245.3 19.3 285 69-360 45-418 (522)
5 PF09423 PhoD: PhoD-like phosp 100.0 3.2E-30 7E-35 255.7 21.2 287 69-363 5-380 (453)
6 cd07378 MPP_ACP5 Homo sapiens 100.0 2.3E-29 5E-34 234.2 18.5 196 162-373 1-226 (277)
7 PTZ00422 glideosome-associated 100.0 4E-29 8.6E-34 236.8 19.4 199 159-373 24-271 (394)
8 cd07395 MPP_CSTP1 Homo sapiens 100.0 3.6E-27 7.8E-32 217.7 18.2 198 160-373 3-229 (262)
9 cd07396 MPP_Nbla03831 Homo sap 99.9 3E-24 6.4E-29 198.7 18.4 190 162-373 1-239 (267)
10 cd07402 MPP_GpdQ Enterobacter 99.9 9.8E-24 2.1E-28 192.2 16.5 184 163-373 1-205 (240)
11 KOG2679 Purple (tartrate-resis 99.9 7.2E-24 1.6E-28 186.2 12.1 205 149-372 33-267 (336)
12 cd07401 MPP_TMEM62_N Homo sapi 99.9 6.3E-23 1.4E-27 188.4 17.9 190 164-366 2-216 (256)
13 cd07399 MPP_YvnB Bacillus subt 99.9 1.4E-21 3.1E-26 174.7 14.8 150 162-365 1-166 (214)
14 PRK11148 cyclic 3',5'-adenosin 99.9 3.5E-21 7.6E-26 178.9 16.8 192 150-372 5-217 (275)
15 cd00842 MPP_ASMase acid sphing 99.8 3.5E-19 7.7E-24 167.3 13.9 183 177-363 56-264 (296)
16 PF00149 Metallophos: Calcineu 99.8 1.1E-19 2.4E-24 155.0 5.2 192 162-360 1-200 (200)
17 cd08163 MPP_Cdc1 Saccharomyces 99.8 5.7E-18 1.2E-22 155.0 15.3 167 180-362 37-230 (257)
18 cd07383 MPP_Dcr2 Saccharomyces 99.7 4.9E-17 1.1E-21 143.9 14.1 150 161-364 2-180 (199)
19 cd07393 MPP_DR1119 Deinococcus 99.7 3.8E-17 8.3E-22 147.9 13.3 182 165-373 2-221 (232)
20 TIGR03767 P_acnes_RR metalloph 99.7 6.6E-16 1.4E-20 149.1 13.1 94 267-363 290-395 (496)
21 cd07392 MPP_PAE1087 Pyrobaculu 99.7 1.2E-15 2.7E-20 133.2 13.8 168 164-362 1-175 (188)
22 TIGR03729 acc_ester putative p 99.7 2.1E-15 4.5E-20 137.4 14.9 186 163-372 1-232 (239)
23 COG1409 Icc Predicted phosphoh 99.6 8.3E-15 1.8E-19 137.1 15.2 179 162-360 1-193 (301)
24 cd07404 MPP_MS158 Microscilla 99.5 2.4E-14 5.2E-19 123.0 9.3 145 164-362 1-151 (166)
25 cd00840 MPP_Mre11_N Mre11 nucl 99.5 6.7E-14 1.4E-18 125.7 12.6 186 163-362 1-203 (223)
26 cd07388 MPP_Tt1561 Thermus the 99.5 2.2E-13 4.7E-18 121.7 15.1 176 161-358 4-189 (224)
27 cd07400 MPP_YydB Bacillus subt 99.5 7E-14 1.5E-18 117.0 11.3 116 164-363 1-128 (144)
28 cd07385 MPP_YkuE_C Bacillus su 99.5 1.6E-13 3.5E-18 123.4 11.6 169 161-368 1-174 (223)
29 TIGR03768 RPA4764 metallophosp 99.5 4.5E-13 9.7E-18 128.3 15.0 93 267-360 291-411 (492)
30 PRK11340 phosphodiesterase Yae 99.4 3.9E-12 8.5E-17 117.9 15.2 165 160-365 48-219 (271)
31 cd00838 MPP_superfamily metall 99.4 2.9E-12 6.2E-17 104.1 11.7 117 165-365 1-120 (131)
32 cd07389 MPP_PhoD Bacillus subt 99.4 4.1E-12 8.9E-17 114.8 11.0 161 163-361 1-205 (228)
33 KOG1432 Predicted DNA repair e 99.3 3.6E-11 7.9E-16 110.0 15.2 200 159-368 51-319 (379)
34 cd07379 MPP_239FB Homo sapiens 99.2 3.3E-11 7.2E-16 99.7 9.1 117 163-361 1-117 (135)
35 cd08166 MPP_Cdc1_like_1 unchar 99.2 1.4E-10 3E-15 100.8 9.1 105 187-362 42-149 (195)
36 PRK05340 UDP-2,3-diacylglucosa 99.1 4.8E-10 1E-14 102.2 10.3 178 162-362 1-201 (241)
37 PF12850 Metallophos_2: Calcin 99.1 2.6E-10 5.7E-15 96.3 7.9 130 162-372 1-131 (156)
38 cd07397 MPP_DevT Myxococcus xa 99.1 2.7E-09 5.9E-14 95.7 13.3 64 162-239 1-64 (238)
39 COG1408 Predicted phosphohydro 99.1 1.2E-09 2.6E-14 101.2 10.9 82 152-239 35-119 (284)
40 cd07403 MPP_TTHA0053 Thermus t 99.0 1.6E-09 3.5E-14 88.9 9.8 50 314-364 58-107 (129)
41 COG2129 Predicted phosphoester 99.0 1E-08 2.2E-13 89.6 15.1 174 161-362 3-189 (226)
42 PF14582 Metallophos_3: Metall 99.0 2.3E-09 5E-14 93.4 10.9 178 161-361 5-219 (255)
43 cd07384 MPP_Cdc1_like Saccharo 99.0 9E-10 1.9E-14 94.9 7.8 49 187-238 45-100 (171)
44 cd08165 MPP_MPPE1 human MPPE1 99.0 3.5E-09 7.6E-14 89.8 10.9 50 186-238 37-89 (156)
45 cd08164 MPP_Ted1 Saccharomyces 98.9 2.5E-09 5.5E-14 92.8 6.6 56 180-239 36-112 (193)
46 cd00845 MPP_UshA_N_like Escher 98.9 3.8E-08 8.2E-13 90.2 12.8 184 162-371 1-217 (252)
47 TIGR00040 yfcE phosphoesterase 98.8 3.8E-08 8.2E-13 83.7 11.8 61 162-237 1-63 (158)
48 COG1768 Predicted phosphohydro 98.8 4.6E-08 1E-12 81.8 10.6 158 187-373 43-215 (230)
49 TIGR01854 lipid_A_lpxH UDP-2,3 98.8 9.7E-08 2.1E-12 86.4 13.3 73 165-238 2-81 (231)
50 KOG3770 Acid sphingomyelinase 98.7 1.1E-07 2.4E-12 93.6 12.6 177 178-361 199-405 (577)
51 cd00841 MPP_YfcE Escherichia c 98.7 4.1E-08 8.8E-13 83.1 6.6 56 163-237 1-58 (155)
52 cd00844 MPP_Dbr1_N Dbr1 RNA la 98.6 7.8E-07 1.7E-11 81.6 14.1 186 164-367 1-236 (262)
53 cd07410 MPP_CpdB_N Escherichia 98.6 1.2E-06 2.6E-11 81.5 15.5 186 162-362 1-232 (277)
54 cd07406 MPP_CG11883_N Drosophi 98.6 7.4E-07 1.6E-11 82.0 13.7 174 162-361 1-208 (257)
55 TIGR00583 mre11 DNA repair pro 98.6 1.2E-06 2.6E-11 85.2 14.1 43 160-202 2-57 (405)
56 cd07394 MPP_Vps29 Homo sapiens 98.5 2.3E-06 5.1E-11 74.1 13.9 60 163-237 1-64 (178)
57 cd07398 MPP_YbbF-LpxH Escheric 98.5 2.8E-07 6.1E-12 82.4 8.3 184 165-363 1-204 (217)
58 PHA02546 47 endonuclease subun 98.5 2.2E-06 4.8E-11 82.1 14.3 74 162-238 1-89 (340)
59 cd07408 MPP_SA0022_N Staphyloc 98.5 1.6E-06 3.6E-11 79.7 12.4 190 162-370 1-224 (257)
60 COG0420 SbcD DNA repair exonuc 98.5 5.8E-07 1.3E-11 87.8 9.6 74 162-239 1-89 (390)
61 cd07411 MPP_SoxB_N Thermus the 98.4 1.9E-06 4.1E-11 79.6 11.4 154 180-360 42-219 (264)
62 cd07409 MPP_CD73_N CD73 ecto-5 98.4 3.4E-06 7.3E-11 78.7 11.7 155 181-361 42-219 (281)
63 cd07412 MPP_YhcR_N Bacillus su 98.4 5.5E-06 1.2E-10 77.5 12.7 92 269-362 138-243 (288)
64 cd07382 MPP_DR1281 Deinococcus 98.3 2.9E-05 6.3E-10 71.0 15.5 180 163-372 1-191 (255)
65 TIGR00619 sbcd exonuclease Sbc 98.3 2.6E-06 5.6E-11 78.1 7.6 73 162-238 1-88 (253)
66 KOG3662 Cell division control 98.3 7.6E-06 1.7E-10 78.3 10.8 115 159-287 46-182 (410)
67 PRK09419 bifunctional 2',3'-cy 98.2 1.8E-05 3.9E-10 87.4 15.3 190 159-361 658-883 (1163)
68 cd07407 MPP_YHR202W_N Saccharo 98.2 0.00012 2.7E-09 68.1 16.6 184 160-361 4-232 (282)
69 PRK04036 DNA polymerase II sma 98.2 1.9E-05 4.2E-10 79.4 12.0 80 159-238 241-343 (504)
70 cd07405 MPP_UshA_N Escherichia 98.1 3E-05 6.6E-10 72.4 12.2 51 309-361 172-222 (285)
71 COG0737 UshA 5'-nucleotidase/2 98.1 6.1E-05 1.3E-09 76.4 14.2 188 157-360 22-247 (517)
72 cd07390 MPP_AQ1575 Aquifex aeo 98.1 7.4E-06 1.6E-10 70.3 6.2 41 187-238 42-82 (168)
73 cd07425 MPP_Shelphs Shewanella 98.1 5.3E-06 1.1E-10 73.8 5.3 62 166-238 2-80 (208)
74 PRK10966 exonuclease subunit S 98.1 1.3E-05 2.7E-10 78.5 8.3 73 162-238 1-87 (407)
75 COG0622 Predicted phosphoester 98.0 4.5E-05 9.8E-10 65.4 9.8 63 162-238 2-65 (172)
76 TIGR00282 metallophosphoestera 98.0 0.00049 1.1E-08 63.2 16.7 179 162-366 1-187 (266)
77 PRK09453 phosphodiesterase; Pr 98.0 1.9E-05 4E-10 68.7 7.1 75 162-238 1-76 (182)
78 PRK09558 ushA bifunctional UDP 98.0 0.00013 2.9E-09 74.5 14.0 193 159-360 32-257 (551)
79 cd07380 MPP_CWF19_N Schizosacc 97.9 3.3E-05 7.2E-10 64.7 6.2 64 165-236 1-68 (150)
80 TIGR01530 nadN NAD pyrophospha 97.8 0.00026 5.7E-09 72.2 13.0 76 268-361 129-219 (550)
81 cd07391 MPP_PF1019 Pyrococcus 97.7 5.5E-05 1.2E-09 65.2 5.6 49 186-238 40-88 (172)
82 cd08162 MPP_PhoA_N Synechococc 97.7 0.00031 6.7E-09 66.4 11.0 38 309-360 206-244 (313)
83 KOG2863 RNA lariat debranching 97.7 0.00033 7.1E-09 65.2 9.8 176 162-359 1-229 (456)
84 COG2908 Uncharacterized protei 97.6 0.00016 3.5E-09 64.2 6.4 68 166-238 2-80 (237)
85 PRK11907 bifunctional 2',3'-cy 97.6 0.0012 2.6E-08 69.7 13.5 59 297-360 296-354 (814)
86 cd07381 MPP_CapA CapA and rela 97.5 0.0025 5.4E-08 57.9 13.8 99 269-374 122-232 (239)
87 PHA02239 putative protein phos 97.5 0.00027 5.8E-09 64.0 6.6 70 162-238 1-73 (235)
88 PRK09419 bifunctional 2',3'-cy 97.4 0.0015 3.4E-08 72.4 12.5 48 309-361 233-281 (1163)
89 TIGR00024 SbcD_rel_arch putati 97.4 0.00043 9.3E-09 62.2 6.7 70 162-238 15-102 (225)
90 smart00854 PGA_cap Bacterial c 97.4 0.0037 8E-08 56.8 12.8 69 299-374 162-230 (239)
91 cd07423 MPP_PrpE Bacillus subt 97.3 0.00037 8E-09 63.2 5.3 68 163-238 2-80 (234)
92 cd07424 MPP_PrpA_PrpB PrpA and 97.3 0.00037 8E-09 61.9 5.0 61 163-238 2-67 (207)
93 PRK00166 apaH diadenosine tetr 97.2 0.00046 1E-08 63.9 5.5 66 163-238 2-69 (275)
94 cd07386 MPP_DNA_pol_II_small_a 97.1 0.0013 2.8E-08 59.9 7.2 74 165-238 2-94 (243)
95 PRK13625 bis(5'-nucleosyl)-tet 97.1 0.00082 1.8E-08 61.3 5.5 66 162-238 1-79 (245)
96 cd07387 MPP_PolD2_C PolD2 (DNA 97.1 0.015 3.2E-07 53.2 13.3 137 164-305 2-176 (257)
97 PRK09418 bifunctional 2',3'-cy 97.1 0.016 3.5E-07 61.1 15.3 47 309-361 243-290 (780)
98 TIGR01390 CycNucDiestase 2',3' 97.0 0.0059 1.3E-07 63.2 11.4 46 309-360 194-240 (626)
99 PRK09420 cpdB bifunctional 2', 96.9 0.019 4.2E-07 59.7 14.4 46 309-360 217-263 (649)
100 COG4186 Predicted phosphoester 96.9 0.02 4.3E-07 47.5 11.4 65 163-237 5-85 (186)
101 PRK09968 serine/threonine-spec 96.9 0.0013 2.8E-08 59.0 4.9 64 163-238 16-81 (218)
102 cd07413 MPP_PA3087 Pseudomonas 96.9 0.0014 3.1E-08 58.8 5.0 67 164-238 1-76 (222)
103 PF00041 fn3: Fibronectin type 96.8 0.005 1.1E-07 45.5 7.0 70 60-141 2-75 (85)
104 PRK11439 pphA serine/threonine 96.8 0.0017 3.8E-08 58.1 4.8 64 163-238 18-83 (218)
105 cd07422 MPP_ApaH Escherichia c 96.6 0.003 6.6E-08 57.9 5.2 64 165-238 2-67 (257)
106 cd07421 MPP_Rhilphs Rhilph pho 96.6 0.0044 9.6E-08 57.4 5.9 68 163-238 3-80 (304)
107 cd00144 MPP_PPP_family phospho 96.6 0.0039 8.4E-08 55.9 5.5 62 166-238 2-68 (225)
108 COG1407 Predicted ICC-like pho 96.5 0.009 1.9E-07 53.4 6.8 73 162-238 20-110 (235)
109 TIGR00668 apaH bis(5'-nucleosy 96.1 0.0087 1.9E-07 55.2 4.9 66 163-238 2-69 (279)
110 COG5555 Cytolysin, a secreted 95.9 0.0081 1.7E-07 54.5 3.6 174 188-362 127-336 (392)
111 KOG2310 DNA repair exonuclease 95.7 0.038 8.2E-07 54.5 7.5 44 159-202 11-67 (646)
112 PF13277 YmdB: YmdB-like prote 95.6 0.37 7.9E-06 43.6 13.1 168 166-360 2-176 (253)
113 cd07416 MPP_PP2B PP2B, metallo 95.4 0.028 6.1E-07 52.9 5.5 65 163-238 44-114 (305)
114 cd07420 MPP_RdgC Drosophila me 95.4 0.03 6.4E-07 53.0 5.6 65 163-238 52-123 (321)
115 KOG0196 Tyrosine kinase, EPH ( 95.2 0.1 2.2E-06 54.0 8.9 74 71-155 454-537 (996)
116 smart00156 PP2Ac Protein phosp 95.1 0.043 9.4E-07 50.8 5.7 68 163-238 29-99 (271)
117 COG1692 Calcineurin-like phosp 95.1 0.8 1.7E-05 41.1 13.1 174 162-362 1-182 (266)
118 KOG4419 5' nucleotidase [Nucle 95.0 0.19 4.1E-06 50.5 10.2 55 294-359 212-268 (602)
119 cd07415 MPP_PP2A_PP4_PP6 PP2A, 94.7 0.049 1.1E-06 50.7 5.1 68 163-238 43-113 (285)
120 cd07414 MPP_PP1_PPKL PP1, PPKL 94.6 0.055 1.2E-06 50.6 5.2 68 163-238 51-121 (293)
121 PF09587 PGA_cap: Bacterial ca 94.6 0.12 2.7E-06 47.1 7.3 73 295-374 169-241 (250)
122 cd07418 MPP_PP7 PP7, metalloph 94.4 0.064 1.4E-06 51.7 5.3 65 163-238 67-138 (377)
123 PTZ00239 serine/threonine prot 94.2 0.077 1.7E-06 49.9 5.2 65 163-238 44-114 (303)
124 cd00063 FN3 Fibronectin type 3 94.1 0.44 9.6E-06 34.5 8.4 69 61-141 4-76 (93)
125 PTZ00480 serine/threonine-prot 93.9 0.094 2E-06 49.6 5.1 23 337-359 231-253 (320)
126 COG1311 HYS2 Archaeal DNA poly 93.8 0.22 4.8E-06 48.9 7.4 80 159-238 223-321 (481)
127 cd07417 MPP_PP5_C PP5, C-termi 93.3 0.13 2.9E-06 48.6 5.1 23 337-359 233-255 (316)
128 PTZ00244 serine/threonine-prot 93.2 0.099 2.1E-06 48.9 3.9 23 337-359 224-246 (294)
129 smart00060 FN3 Fibronectin typ 93.1 0.88 1.9E-05 31.8 8.3 69 63-141 6-76 (83)
130 cd07419 MPP_Bsu1_C Arabidopsis 93.0 0.2 4.3E-06 47.4 5.8 21 337-357 242-262 (311)
131 KOG4221 Receptor mediating net 88.2 1.3 2.8E-05 48.2 6.9 80 60-154 618-712 (1381)
132 KOG4221 Receptor mediating net 85.8 3.3 7.2E-05 45.2 8.3 80 66-154 527-612 (1381)
133 KOG3947 Phosphoesterases [Gene 82.9 2.7 5.8E-05 38.5 5.3 64 160-240 60-128 (305)
134 PF04042 DNA_pol_E_B: DNA poly 82.8 1 2.2E-05 39.8 2.7 77 164-240 1-93 (209)
135 KOG3513 Neural cell adhesion m 82.0 6.2 0.00013 42.9 8.5 71 59-140 821-895 (1051)
136 PF10179 DUF2369: Uncharacteri 72.6 12 0.00025 35.1 6.5 17 123-139 16-32 (300)
137 KOG0372 Serine/threonine speci 71.7 6.1 0.00013 35.6 4.2 64 164-238 45-114 (303)
138 KOG4258 Insulin/growth factor 71.6 15 0.00032 39.0 7.5 111 59-171 487-624 (1025)
139 PTZ00235 DNA polymerase epsilo 65.3 40 0.00087 31.4 8.4 77 160-238 26-122 (291)
140 KOG0374 Serine/threonine speci 64.6 6 0.00013 37.7 3.0 66 163-238 60-131 (331)
141 KOG0371 Serine/threonine prote 63.4 10 0.00022 34.5 3.9 67 164-238 62-131 (319)
142 COG2248 Predicted hydrolase (m 61.5 25 0.00053 32.1 6.0 77 159-238 174-250 (304)
143 PRK10301 hypothetical protein; 60.2 89 0.0019 25.1 10.3 22 120-141 86-109 (124)
144 PF01108 Tissue_fac: Tissue fa 59.0 69 0.0015 24.7 7.8 71 59-141 23-98 (107)
145 KOG3513 Neural cell adhesion m 56.4 66 0.0014 35.4 9.2 75 58-141 615-693 (1051)
146 KOG3325 Membrane coat complex 55.4 12 0.00026 31.1 2.8 25 339-363 98-122 (183)
147 KOG0373 Serine/threonine speci 53.8 22 0.00048 31.5 4.3 64 164-238 48-117 (306)
148 TIGR02855 spore_yabG sporulati 53.3 12 0.00025 34.4 2.6 50 297-359 115-165 (283)
149 PF05582 Peptidase_U57: YabG p 52.1 15 0.00033 33.8 3.2 50 297-359 116-166 (287)
150 PRK09453 phosphodiesterase; Pr 51.7 14 0.0003 31.7 2.9 14 346-359 116-129 (182)
151 PF10179 DUF2369: Uncharacteri 51.5 81 0.0018 29.6 8.0 19 123-141 261-279 (300)
152 cd02850 Cellulase_N_term Cellu 47.1 1.2E+02 0.0025 22.5 8.4 23 119-141 55-78 (86)
153 PF07353 Uroplakin_II: Uroplak 47.0 25 0.00055 29.4 3.4 33 124-156 104-141 (184)
154 cd02852 Isoamylase_N_term Isoa 43.2 32 0.00068 27.2 3.5 23 119-141 48-70 (119)
155 PF09294 Interfer-bind: Interf 42.6 21 0.00046 27.3 2.4 19 123-141 68-86 (106)
156 cd02856 Glycogen_debranching_e 42.1 35 0.00076 26.2 3.5 23 119-141 44-66 (103)
157 PF08139 LPAM_1: Prokaryotic m 41.9 35 0.00075 19.2 2.4 18 11-28 7-24 (25)
158 KOG0196 Tyrosine kinase, EPH ( 41.8 92 0.002 33.3 7.2 96 34-140 315-416 (996)
159 PF13473 Cupredoxin_1: Cupredo 41.7 38 0.00083 26.0 3.7 65 58-142 31-95 (104)
160 COG2843 PgsA Putative enzyme o 38.1 99 0.0022 30.0 6.5 68 299-374 213-282 (372)
161 cd02853 MTHase_N_term Maltooli 37.9 42 0.00091 24.7 3.3 21 120-141 40-60 (85)
162 PF06874 FBPase_2: Firmicute f 37.7 27 0.00059 35.9 2.8 48 180-238 176-224 (640)
163 cd02860 Pullulanase_N_term Pul 35.8 46 0.001 25.3 3.3 24 118-141 45-68 (100)
164 PRK13792 lysozyme inhibitor; P 35.6 1.5E+02 0.0032 24.0 6.2 22 60-83 43-64 (127)
165 PF03808 Glyco_tran_WecB: Glyc 32.6 1.9E+02 0.0041 24.5 6.9 51 293-355 58-108 (172)
166 KOG2476 Uncharacterized conser 31.7 62 0.0013 32.1 4.0 40 161-200 5-47 (528)
167 KOG0375 Serine-threonine phosp 28.4 66 0.0014 30.8 3.5 67 163-238 89-159 (517)
168 PF09949 DUF2183: Uncharacteri 28.2 1E+02 0.0022 23.8 4.0 27 162-190 65-91 (100)
169 PF01784 NIF3: NIF3 (NGG1p int 25.1 70 0.0015 28.9 3.0 43 315-359 56-98 (241)
170 PF02922 CBM_48: Carbohydrate- 24.7 87 0.0019 22.7 3.0 24 119-142 48-73 (85)
171 PRK10425 DNase TatD; Provision 24.2 82 0.0018 28.8 3.4 68 279-363 90-157 (258)
172 PRK11449 putative deoxyribonuc 23.3 80 0.0017 28.9 3.1 66 279-362 96-161 (258)
173 PRK10799 metal-binding protein 22.9 1.7E+02 0.0037 26.5 5.2 47 310-361 56-102 (247)
174 PF13205 Big_5: Bacterial Ig-l 22.0 1.5E+02 0.0032 22.4 4.0 16 127-142 70-85 (107)
175 PF13258 DUF4049: Domain of un 21.8 85 0.0018 28.3 2.7 15 226-240 128-142 (318)
176 TIGR03000 plancto_dom_1 Planct 21.7 1.9E+02 0.0042 21.0 4.1 24 118-141 25-48 (75)
177 COG3855 Fbp Uncharacterized pr 21.5 1E+02 0.0023 30.6 3.5 41 187-238 190-230 (648)
178 PF02350 Epimerase_2: UDP-N-ac 20.9 1.6E+02 0.0034 28.2 4.7 45 309-356 178-222 (346)
179 PF01764 Lipase_3: Lipase (cla 20.8 1E+02 0.0023 24.4 3.1 23 335-357 49-72 (140)
180 PF00753 Lactamase_B: Metallo- 20.8 1.5E+02 0.0033 24.2 4.3 24 210-233 170-193 (194)
181 PRK10378 inactive ferrous ion 20.4 4.8E+02 0.01 25.4 7.8 18 10-27 4-21 (375)
182 KOG4222 Axon guidance receptor 20.1 1.9E+02 0.0041 32.2 5.4 76 59-140 747-825 (1281)
183 TIGR00486 YbgI_SA1388 dinuclea 20.0 2.1E+02 0.0046 25.9 5.2 42 315-359 60-101 (249)
No 1
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-71 Score=524.85 Aligned_cols=336 Identities=37% Similarity=0.598 Sum_probs=292.7
Q ss_pred hhccCCCcccccccCCCCCcCcCCCCccccCCCCCCCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCC--
Q 017284 24 LNNGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYD-- 101 (374)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~-- 101 (374)
...|..+.++.+.|...++..++....++..|...++|+||||++++... +|+|+|.|.+. ..+.|+||...++..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~peQvhlS~~~~~~-~m~VswvT~~~-~~~~V~Yg~~~~~~~~~ 85 (452)
T KOG1378|consen 8 QSEINPKHTLHDINPLPGTLHLLSESEQLTFPSVVNSPEQVHLSFTDNLN-EMRVSWVTGDG-EENVVRYGEVKDKLDNS 85 (452)
T ss_pred eeeccCCCccccccccCcccccccccccccCcccCCCCCeEEEeccCCCC-cEEEEEeCCCC-CCceEEEeecCCCcccc
Confidence 34566888899999988888888888778888888999999999999864 99999999964 358999998776532
Q ss_pred ---ceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCCC-CCCceEEEECCCCCCCCCCcEEEEEecCCCCCCcH
Q 017284 102 ---SSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGDG-DSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSL 177 (374)
Q Consensus 102 ---~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~~-~~s~~~~F~T~p~~~~~~~~~f~v~gD~~~~~~~~ 177 (374)
..+.+.+..|...+++++++|+|++++|+|+|+||||||++ .||++++|+|+| ++..+.+|+++||+|......
T Consensus 86 ~~~~~~~~~~~~y~~~~~~sg~ih~~~~~~L~~~t~YyY~~Gs~~~wS~~f~F~t~p--~~~~~~~~~i~GDlG~~~~~~ 163 (452)
T KOG1378|consen 86 AARGMTEAWTDGYANGWRDSGYIHDAVMKNLEPNTRYYYQVGSDLKWSEIFSFKTPP--GQDSPTRAAIFGDMGCTEPYT 163 (452)
T ss_pred ccccceEEEecccccccceeeeEeeeeecCCCCCceEEEEeCCCCCcccceEeECCC--CccCceeEEEEcccccccccc
Confidence 22333333444445789999999999999999999999997 579999999999 345799999999999998877
Q ss_pred HHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCccccccccccc
Q 017284 178 STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRI 256 (374)
Q Consensus 178 ~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f 256 (374)
.++....++ ++|+|||.||++|++++.+ .+||+|++++||+++.+|||++.||||+++.+.. .|.+|.+||
T Consensus 164 s~~~~~~~~~k~d~vlhiGDlsYa~~~~n----~~wD~f~r~vEp~As~vPymv~~GNHE~d~~~~~----~F~~y~~Rf 235 (452)
T KOG1378|consen 164 STLRNQEENLKPDAVLHIGDLSYAMGYSN----WQWDEFGRQVEPIASYVPYMVCSGNHEIDWPPQP----CFVPYSARF 235 (452)
T ss_pred chHhHHhcccCCcEEEEecchhhcCCCCc----cchHHHHhhhhhhhccCceEEecccccccCCCcc----cccccceee
Confidence 788877777 5999999999999998732 6999999999999999999999999999876433 689999999
Q ss_pred ccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCC--CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCC-CCCCC
Q 017284 257 ATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYV--KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVV-HYMEG 333 (374)
Q Consensus 257 ~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~--~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~-~~~~~ 333 (374)
.||.+++.+..++||||++|+||||+|+|+.+++ .+.+|++||+++|++++|+++||+||++|.|+|++... +.+++
T Consensus 236 ~mP~~~s~s~~~l~YSfd~G~vhfv~lsse~~~~~~~~~~QY~WL~~dL~~v~r~~tPWlIv~~HrP~Y~S~~~~~~reG 315 (452)
T KOG1378|consen 236 NMPGNSSESDSNLYYSFDVGGVHFVVLSTETYYNFLKGTAQYQWLERDLASVDRKKTPWLIVQGHRPMYCSSNDAHYREG 315 (452)
T ss_pred ccCCCcCCCCCceeEEEeeccEEEEEEeccccccccccchHHHHHHHHHHHhcccCCCeEEEEecccceecCCchhhccC
Confidence 9999988888899999999999999999998863 46899999999999999877999999999999998875 66777
Q ss_pred H--HHHHHHHHHHHHcCCcEEEEcCcccccccccccCCce
Q 017284 334 E--SMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFH 371 (374)
Q Consensus 334 ~--~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h 371 (374)
+ .+|+.|++||.+++||+||.||+|+|||++|++|.+.
T Consensus 316 ~~~~~~~~LE~l~~~~~VDvvf~GHvH~YER~~piyn~~~ 355 (452)
T KOG1378|consen 316 EFESMREGLEPLFVKYKVDVVFWGHVHRYERFCPIYNNTC 355 (452)
T ss_pred cchhhHHHHHHHHHHhceeEEEeccceehhccchhhccee
Confidence 6 8999999999999999999999999999999999875
No 2
>PLN02533 probable purple acid phosphatase
Probab=100.00 E-value=8e-68 Score=515.91 Aligned_cols=329 Identities=36% Similarity=0.609 Sum_probs=277.8
Q ss_pred ccCCCcccccccCCCCCcCcCCCCccccCCCCCCCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEE
Q 017284 26 NGTARITSRFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAE 105 (374)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~ 105 (374)
.|+.+.+..|+|++...+.++... .+..+..|+||||++++ .++|+|+|.|.+. ..+.|+||++++.+..++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~P~qvhls~~~--~~~m~V~W~T~~~-~~~~V~yG~~~~~l~~~a~ 85 (427)
T PLN02533 13 IVLAGNVLSYDRPGTRKNLVIHPD----NEDDPTHPDQVHISLVG--PDKMRISWITQDS-IPPSVVYGTVSGKYEGSAN 85 (427)
T ss_pred hhhccCcccccCCCcccccccccc----CCCCCCCCceEEEEEcC--CCeEEEEEECCCC-CCCEEEEecCCCCCcceEE
Confidence 445668899999954333222211 12345789999999997 4799999999964 5689999999998999999
Q ss_pred eEEEEEEe-ecccccEEEEEEeCCCCCCCEEEEEeCCCCCCceEEEECCCCCCCCCCcEEEEEecCCCCCCcHHHHHHHH
Q 017284 106 GTVTNYTF-YKYKSGYIHHCLVDDLEYDTKYYYKIGDGDSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYM 184 (374)
Q Consensus 106 g~~~~~~~-~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~~~~s~~~~F~T~p~~~~~~~~~f~v~gD~~~~~~~~~~l~~~~ 184 (374)
|++++|+. ..+.++++|+|+|+||+|+|+|+|||+++.+|++++|+|+|.. .+++|+++||+|.......+++++.
T Consensus 86 g~~~~~~~~~~~~~g~iH~v~l~~L~p~T~Y~Yrvg~~~~s~~~~F~T~p~~---~~~~f~v~GDlG~~~~~~~tl~~i~ 162 (427)
T PLN02533 86 GTSSSYHYLLIYRSGQINDVVIGPLKPNTVYYYKCGGPSSTQEFSFRTPPSK---FPIKFAVSGDLGTSEWTKSTLEHVS 162 (427)
T ss_pred EEEEEEeccccccCCeEEEEEeCCCCCCCEEEEEECCCCCccceEEECCCCC---CCeEEEEEEeCCCCcccHHHHHHHH
Confidence 99888875 2356789999999999999999999998777899999999853 6899999999998766667888888
Q ss_pred HhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCC
Q 017284 185 QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASK 264 (374)
Q Consensus 185 ~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~ 264 (374)
+.+|||||++||++|++.. +.+|+.|++.++++.+.+|+|+++||||....+.. ....|..|.++|.||..+.+
T Consensus 163 ~~~pD~vl~~GDl~y~~~~-----~~~wd~f~~~i~~l~s~~P~m~~~GNHE~~~~~~~-~~~~f~~y~~rf~mP~~~~g 236 (427)
T PLN02533 163 KWDYDVFILPGDLSYANFY-----QPLWDTFGRLVQPLASQRPWMVTHGNHELEKIPIL-HPEKFTAYNARWRMPFEESG 236 (427)
T ss_pred hcCCCEEEEcCccccccch-----HHHHHHHHHHhhhHhhcCceEEeCccccccccccc-cCcCccchhhcccCCccccC
Confidence 8899999999999997654 67899999999999999999999999998643321 22357789999999987666
Q ss_pred CCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCC--CHHHHHHHHH
Q 017284 265 STNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYME--GESMRAVFES 342 (374)
Q Consensus 265 ~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~--~~~~r~~l~~ 342 (374)
...+.||||++|++|||+||++.++....+|++||+++|++++|++++|+||++|+|+|++...+... ...+|+.|++
T Consensus 237 ~~~~~yYSfd~g~vhfI~Lds~~~~~~~~~Q~~WLe~dL~~~~r~~~pwiIv~~H~P~y~s~~~~~~~~~~~~~r~~le~ 316 (427)
T PLN02533 237 STSNLYYSFNVYGVHIIMLGSYTDFEPGSEQYQWLENNLKKIDRKTTPWVVAVVHAPWYNSNEAHQGEKESVGMKESMET 316 (427)
T ss_pred CCCCceEEEEECCEEEEEEeCCccccCchHHHHHHHHHHHhhcccCCCEEEEEeCCCeeecccccCCcchhHHHHHHHHH
Confidence 67789999999999999999998887889999999999999887788999999999999987654332 2457889999
Q ss_pred HHHHcCCcEEEEcCcccccccccccCCc
Q 017284 343 WFVHSRVDFIFAGHVHAYERSVRMSFPF 370 (374)
Q Consensus 343 ll~~~~VdlvlsGH~H~yeR~~~~~~~~ 370 (374)
+|++++||++|+||+|.|||++|+++++
T Consensus 317 Ll~~~~VdlvlsGH~H~YeR~~p~~~~~ 344 (427)
T PLN02533 317 LLYKARVDLVFAGHVHAYERFDRVYQGK 344 (427)
T ss_pred HHHHhCCcEEEecceecccccccccCCc
Confidence 9999999999999999999999998864
No 3
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=100.00 E-value=3.3e-37 Score=289.49 Aligned_cols=206 Identities=41% Similarity=0.743 Sum_probs=162.5
Q ss_pred CCCcEEEEEecCCCC-CCcHHHHHHHHH--hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 159 DAPYTFGIIGDLGQT-YNSLSTLKHYMQ--SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~-~~~~~~l~~~~~--~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
+.++||+++||+|.. .....+++++.+ .+|||||++||++|+.+... ..+|+.|++.++++...+|+++++|||
T Consensus 2 ~~~~~f~v~gD~~~~~~~~~~~~~~l~~~~~~~d~vl~~GDl~~~~~~~~---~~~~~~~~~~~~~~~~~~P~~~~~GNH 78 (294)
T cd00839 2 DTPFKFAVFGDMGQNTNNSTNTLDHLEKELGNYDAILHVGDLAYADGYNN---GSRWDTFMRQIEPLASYVPYMVTPGNH 78 (294)
T ss_pred CCcEEEEEEEECCCCCCCcHHHHHHHHhccCCccEEEEcCchhhhcCCcc---chhHHHHHHHHHHHHhcCCcEEcCccc
Confidence 358999999999973 456778888887 49999999999999766421 368999999999998899999999999
Q ss_pred ccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC---CCChHHHHHHHHHHhhccCCCCC
Q 017284 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY---VKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 236 D~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~---~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
|......... ...+..++.++........+.||+|++|++|||+|||+... ....+|++||+++|+++++.+.+
T Consensus 79 D~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~Ysf~~g~v~fi~Lds~~~~~~~~~~~~q~~WL~~~L~~~~~~~~~ 155 (294)
T cd00839 79 EADYNFSFYK---IKAFFPRFRFPHSPSGSTSNLWYSFDVGPVHFVSLSTEVDFYGDGPGSPQYDWLEADLAKVDRSKTP 155 (294)
T ss_pred ccccCCCCcc---cccccccccccCCCCCCCCCceEEEeeCCEEEEEEecccccccCCCCcHHHHHHHHHHHHhcccCCC
Confidence 9864321110 11111123334333444567899999999999999998765 45789999999999997666679
Q ss_pred eEEEEecccceecCCCCCC--CCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCc
Q 017284 313 WLIVLMHVPLYSSNVVHYM--EGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPF 370 (374)
Q Consensus 313 w~iv~~H~P~y~~~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~ 370 (374)
|+||++|+|+|+....... .....++.|+++|++++|++||+||+|.|+|++|+++++
T Consensus 156 ~~iv~~H~P~~~~~~~~~~~~~~~~~~~~l~~ll~~~~v~~vl~GH~H~y~r~~p~~~~~ 215 (294)
T cd00839 156 WIIVMGHRPMYCSNTDHDDCIEGEKMRAALEDLFYKYGVDLVLSGHVHAYERTCPVYNGT 215 (294)
T ss_pred eEEEEeccCcEecCccccccchhHHHHHHHHHHHHHhCCCEEEEccceeeEeechhhCCE
Confidence 9999999999987654322 245788999999999999999999999999999997753
No 4
>COG3540 PhoD Phosphodiesterase/alkaline phosphatase D [Inorganic ion transport and metabolism]
Probab=99.97 E-value=1.2e-30 Score=245.28 Aligned_cols=285 Identities=17% Similarity=0.171 Sum_probs=205.3
Q ss_pred eCCCCCceEEEEEcCCC-------CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 69 GDYDGKAVIISWVTPNE-------LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 69 ~~d~~~~~~v~W~t~~~-------~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.|||..+.+|.|++.+. +.+..+|+++.++..+.+..|+..+. ....+.+++.++||+|++.|+||+..
T Consensus 45 SGDp~~~svviWTRl~P~p~~~g~~v~V~wEvs~~~~f~~ivr~gt~~a~----p~~dhtv~v~~~gL~P~~~yfYRf~~ 120 (522)
T COG3540 45 SGDPTATSVVIWTRLDPEPLNGGRPVPVIWEVSTDENFSNIVRKGTVIAS----PELDHTVHVDLRGLSPDQDYFYRFKA 120 (522)
T ss_pred cCCCCCCeEEEEEccCCccccCCCCcceEEEecCCccHHHHHhcCCccCC----cccCceEEEeccCCCCCceEEEEEee
Confidence 36788999999998751 34556777777664444444443332 24679999999999999999999987
Q ss_pred C-CCCceEEEECCCCCCCCC-CcEEEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCcc-------------
Q 017284 142 G-DSSREFWFQTPPKIHPDA-PYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYN------------- 206 (374)
Q Consensus 142 ~-~~s~~~~F~T~p~~~~~~-~~~f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~------------- 206 (374)
+ ..|++++|||+|+.+... .++|+..+|.+.+.+...+++.|.+.+||||||+||+||+++....
T Consensus 121 ~~~~spvGrtrTapa~~~~i~~~~fa~ascQ~~~~gy~~aY~~ma~~~~D~viH~GDyIYeyg~~~~~~~~~~~~~~~~~ 200 (522)
T COG3540 121 GDERSPVGRTRTAPAPGRAIRFVWFADASCQGWEIGYMTAYKTMAKEEPDFVIHLGDYIYEYGPIPDEVSLNSWKNVVVT 200 (522)
T ss_pred CCccccccccccCCCCCCcchhhhhhhccccccccchhHHHHHHHhcCCCEEEEcCCeeeccCCcccccccccccccccC
Confidence 5 568999999999886543 4677788888888788889999999999999999999998875310
Q ss_pred -----------ccchhhHHHH--HHHHHhhhcCCeEEcCCCcccccCCCCCCcc--c-----------ccccccccc-cC
Q 017284 207 -----------DVGIRWDSWG--RFIEQSAAYQPWIWSAGNHEIEFMPNMGEVI--P-----------FKSYLHRIA-TP 259 (374)
Q Consensus 207 -----------~~~~~w~~~~--~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~--~-----------~~~y~~~f~-~p 259 (374)
++..+|..+. ..++...+..||++.|++||+.+|...+... + ..++++++. ||
T Consensus 201 ~~~~~ei~TLddYR~rya~y~~D~nLqaahA~~Pwi~~WDDHEv~NN~~~~~~~nD~~~~~k~~~~r~a~A~qAyyE~mP 280 (522)
T COG3540 201 QHKSKEIETLDDYRGRYAYYKTDENLQAAHAAFPWIVQWDDHEVANNWSNSIDENDSRYDEKDFVLRAAAARQAYYEHMP 280 (522)
T ss_pred CCCCcceeeHHHHhhHHhhhcccHHHHHhhccCCEEEEeccccccccccccccccCCCCChHHHHHHHHHHHHHHHHhCc
Confidence 1222332221 3366777889999999999998654221111 0 113334333 77
Q ss_pred cCCCCC--CCCceEEEecCC-EEEEEEeCCCCC----------------------CCChHHHHHHHHHHhhccCCCCCeE
Q 017284 260 YTASKS--TNPLWYAIRRAS-AHIIVLSSYSPY----------------------VKYTPQWWWLREELKKVDREKTPWL 314 (374)
Q Consensus 260 ~~~~~~--~~~~~ysf~~g~-v~fi~Ldt~~~~----------------------~~~~~Q~~WL~~~L~~~~~~~~~w~ 314 (374)
.+.... ....|.+|.+|+ +.|.+||+.+.- ..|.+|.+||++.|.+ +++.|+
T Consensus 281 iR~~~~p~~~~lYR~~tyG~La~~~~LDtR~YR~dqp~~dg~~~~~q~~~~~~~~mlG~~QeqWLk~~L~~---SkatWn 357 (522)
T COG3540 281 IRYSSLPTDGRLYRSFTYGPLADLFVLDTRSYRTDQPCGDGNPPNCQAVAGSAATMLGEQQEQWLKRGLGA---SKATWN 357 (522)
T ss_pred cccccCCccceeeeeeccccccceeeeehhhhccccccCCCCcchhhhhhCccccchhhHHHHHHHhhhhh---cchhhh
Confidence 765432 357999999999 789999995311 2478999999999999 899999
Q ss_pred EEEecccceec---CC----------CCCCCCHHHHHHHHHHHHHcCCc--EEEEcCcccc
Q 017284 315 IVLMHVPLYSS---NV----------VHYMEGESMRAVFESWFVHSRVD--FIFAGHVHAY 360 (374)
Q Consensus 315 iv~~H~P~y~~---~~----------~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~y 360 (374)
|+..-.|+--. +. ..+.....-|+.|...+...++. +||+|++|..
T Consensus 358 Via~q~~~~~~~~d~~~a~~~~~a~~D~wdGy~~~RerLl~fi~~~~~~N~V~LtgDvH~~ 418 (522)
T COG3540 358 VIAQQMPLGLVVFDGSPATEGQEANADGWDGYPAGRERLLRFIADRKIRNTVVLTGDVHYS 418 (522)
T ss_pred hhhhhcceeEeecCCCccccCccccccCcCCCcccHHHHHHHHHhcCCCCcEEEechhHHH
Confidence 99988887321 11 01122244688999999999886 8999999974
No 5
>PF09423 PhoD: PhoD-like phosphatase; InterPro: IPR018946 This entry contains a number of putative proteins as well as Alkaline phosphatase D which catalyses the reaction: A phosphate monoester + H(2)O = an alcohol + phosphate ; PDB: 2YEQ_B.
Probab=99.97 E-value=3.2e-30 Score=255.66 Aligned_cols=287 Identities=20% Similarity=0.268 Sum_probs=152.9
Q ss_pred eCCCCCceEEEEEcCCC--------CCCceEEEeecCCCCCc--eEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEE
Q 017284 69 GDYDGKAVIISWVTPNE--------LGSNRVQYGKLEKKYDS--SAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYK 138 (374)
Q Consensus 69 ~~d~~~~~~v~W~t~~~--------~~~~~V~y~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~ 138 (374)
.|||..+.+|.|++... ..+..|++..+.+.... ...+...+ ....++++++.++||+|+|+|+||
T Consensus 5 sGdp~~~svilWtR~~~~~~~~~~~~~~~~V~~~va~d~~~~~~~~~~~~~~----~~~~d~t~~v~v~gL~p~t~Y~Y~ 80 (453)
T PF09423_consen 5 SGDPTPDSVILWTRVTPPAAAGGMPKAPVPVRWEVATDPEFSNVVRSGTVTT----TAERDFTVKVDVTGLQPGTRYYYR 80 (453)
T ss_dssp EE---SS-EEEEEE--SBGGTB---SS-EEEEEEEESSTTSSSEEEEEEEEE-----GGGTTEEEEEE-S--TT-EEEEE
T ss_pred ccCCCCCEEEEEEEecCcccCCCCCCCcEEEEEEEECCCCccceEEecceec----ccCCCeEeecccCCCCCCceEEEE
Confidence 45678899999999865 12445666665544332 33333322 235679999999999999999999
Q ss_pred eCCC---CCCceEEEECCCCCCCCCCcEEEEEecCCCCCCcHHHHHHHHH-hCCCeEEecccccccCCCC---c------
Q 017284 139 IGDG---DSSREFWFQTPPKIHPDAPYTFGIIGDLGQTYNSLSTLKHYMQ-SGGQSVLFLGDLSYADRYE---Y------ 205 (374)
Q Consensus 139 v~~~---~~s~~~~F~T~p~~~~~~~~~f~v~gD~~~~~~~~~~l~~~~~-~~~d~vl~~GD~~y~~~~~---~------ 205 (374)
+..+ ..++.++|+|+|... ...+||+++||.+.......++.++.+ .+|||+||+||++|++... .
T Consensus 81 ~~~~~~~~~s~~g~~rT~p~~~-~~~~r~a~~SC~~~~~~~~~~~~~~a~~~~~D~~l~lGD~IY~d~~~~~~~~~~~~~ 159 (453)
T PF09423_consen 81 FVVDGGGQTSPVGRFRTAPDGD-PDPFRFAFGSCQNYEDGYFPAYRRIAERDDPDFVLHLGDQIYEDGGGGYGNLSRRPI 159 (453)
T ss_dssp EEE--TTEE---EEEE--TT------EEEEEE----CCC---HHHHHHTT-S--SEEEE-S-SS----TTSS--TT---S
T ss_pred EEEecCCCCCCceEEEcCCCCC-CCceEEEEECCCCcccChHHHHHhhhccCCCcEEEEeCCeeeccCCccccccccccc
Confidence 9873 567899999997543 346999999999886666888899988 4999999999999988520 0
Q ss_pred ----------c---ccchhhHHHH--HHHHHhhhcCCeEEcCCCcccccCCCCCCc-------ccc-----cccccccc-
Q 017284 206 ----------N---DVGIRWDSWG--RFIEQSAAYQPWIWSAGNHEIEFMPNMGEV-------IPF-----KSYLHRIA- 257 (374)
Q Consensus 206 ----------~---~~~~~w~~~~--~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~-------~~~-----~~y~~~f~- 257 (374)
. ++..+|..+. ..++.+.+.+|++.+|++||+..+...... ..+ .+++.++.
T Consensus 160 ~r~~~p~~~~~~l~~yR~~y~~~~~~p~l~~~~~~~P~~~iwDDHdi~nn~~~~~~~~~~~~~~~~~~~~~~a~~ay~e~ 239 (453)
T PF09423_consen 160 GRAPEPAHEAETLDDYRRRYRQYRSDPDLRRLHANVPWIMIWDDHDIGNNWWGDGAENHQDTSGDFQDRRRAAYQAYFEY 239 (453)
T ss_dssp -----SSSS--SHHHHHHHHHHHHT-HHHHHHHHHSEEEE---STTTSTT-BTTB-STT---HHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccHHHHHHHHHHHcCCHHHHHHhhcccEEEEccCceecccccCCccccccccccchHHHHHHHHHHHHhh
Confidence 0 0112222221 235677789999999999999644321111 011 12222222
Q ss_pred cCcCC---CCCCCCceEEEecCC-EEEEEEeCCCC---------------------CCCChHHHHHHHHHHhhccCCCCC
Q 017284 258 TPYTA---SKSTNPLWYAIRRAS-AHIIVLSSYSP---------------------YVKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 258 ~p~~~---~~~~~~~~ysf~~g~-v~fi~Ldt~~~---------------------~~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
+|... .+.....|++|.+|+ +.|++||+... -.++.+|++||++.|++ +.++
T Consensus 240 ~p~r~~~~~~~~~~~y~~~~~G~~~~~~~LD~R~~R~~~~~~~~~~~~~~~~~~~~~mLG~~Q~~wL~~~L~~---s~a~ 316 (453)
T PF09423_consen 240 QPVRNPDPPGDQGRIYRSFRYGDLVEFFMLDTRSYRSPPPCDGPGDTCPAADDPSRTMLGEEQWDWLEDWLAS---SQAT 316 (453)
T ss_dssp S---GGG-BTTB----EEEEETTTEEEEE--SSSS----CCCSSEE--HHHH-TT--SS-HHHHHHHHHHHHH-----SS
T ss_pred cCccCCCccCCCCceEEEEecCCceeEEEEechhccccccccccccccccccCCccCcCCHHHHHHHHHHHhc---CCCc
Confidence 34331 123456899999999 99999999531 12478999999999998 5689
Q ss_pred eEEEEecccceecCC-----------CCCCCCHHHHHHHHHHHHHcCCc--EEEEcCccccccc
Q 017284 313 WLIVLMHVPLYSSNV-----------VHYMEGESMRAVFESWFVHSRVD--FIFAGHVHAYERS 363 (374)
Q Consensus 313 w~iv~~H~P~y~~~~-----------~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H~yeR~ 363 (374)
|+||..-.|+..... ..+......|+.|.++|.+.++. ++|+|++|...-.
T Consensus 317 ~kvi~s~v~~~~~~~~~~~~~~~~~~d~W~g~~~er~~Ll~~l~~~~~~~vV~LSGDvH~~~~~ 380 (453)
T PF09423_consen 317 WKVIGSSVPFSPLNFPDAAEGLPFNMDSWDGYPAERQRLLDFLRESGIRNVVFLSGDVHASAAS 380 (453)
T ss_dssp EEEEE-SS--S---SS-SS-S--EETTSGGGSHHHHHHHHHHHHHTT---EEEEE-SSSSEEEE
T ss_pred EEEEEeCCceecccccccccccccCCCchhhCHHHHHHHHHHHHhhCCCCEEEEecCcchheee
Confidence 999998887744321 12333466799999999998875 7899999996543
No 6
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=99.97 E-value=2.3e-29 Score=234.24 Aligned_cols=196 Identities=21% Similarity=0.311 Sum_probs=139.3
Q ss_pred cEEEEEecCCCC-CCcHH----HHHHHHH-hCCCeEEecccccccCCCCccccchhh-HHHHHHHHHhhhcCCeEEcCCC
Q 017284 162 YTFGIIGDLGQT-YNSLS----TLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRW-DSWGRFIEQSAAYQPWIWSAGN 234 (374)
Q Consensus 162 ~~f~v~gD~~~~-~~~~~----~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w-~~~~~~~~~~~~~~P~~~v~GN 234 (374)
++|+++||+|.. ..... .+.++.+ .+|||||++||++|+++....+ ...| +.|.+.+..+...+|+++++||
T Consensus 1 ~~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~dfvv~~GD~~y~~g~~~~~-~~~~~~~~~~~~~~~~~~~P~~~v~GN 79 (277)
T cd07378 1 LRFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDFILSLGDNFYDDGVGSVD-DPRFETTFEDVYSAPSLQVPWYLVLGN 79 (277)
T ss_pred CeEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCEEEeCCCccccCCCCCCc-chHHHHHHHHHccchhhcCCeEEecCC
Confidence 489999999986 22222 2333333 4999999999999987643222 2334 3455555444457899999999
Q ss_pred cccccCCCCCCcccccc--cccccccCcCCCCCCCCceEEEecC------CEEEEEEeCCCCC---------------CC
Q 017284 235 HEIEFMPNMGEVIPFKS--YLHRIATPYTASKSTNPLWYAIRRA------SAHIIVLSSYSPY---------------VK 291 (374)
Q Consensus 235 HD~~~~~~~~~~~~~~~--y~~~f~~p~~~~~~~~~~~ysf~~g------~v~fi~Ldt~~~~---------------~~ 291 (374)
||...+. ..+..+.. +..+|.+| ..||+|+++ +++||+|||.... ..
T Consensus 80 HD~~~~~--~~~~~~~~~~~~~~~~~~--------~~~y~~~~~~~~~~~~~~~i~LDt~~~~~~~~~~~~~~~~~~~~~ 149 (277)
T cd07378 80 HDYSGNV--SAQIDYTKRPNSPRWTMP--------AYYYRVSFPFPSSDTTVEFIMIDTVPLCGNSDDIASPYGPPNGKL 149 (277)
T ss_pred cccCCCc--hheeehhccCCCCCccCc--------chheEEEeecCCCCCEEEEEEEeChhHcCccccccccccCcchhh
Confidence 9986321 11111111 12333333 579999998 7999999996421 13
Q ss_pred ChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCce
Q 017284 292 YTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFH 371 (374)
Q Consensus 292 ~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h 371 (374)
+.+|++||+++|+++ ..+|+||++|+|+++..... .....++.|++++++++|++||+||.|.+++..+-..+++
T Consensus 150 ~~~Q~~wL~~~L~~~---~~~~~iv~~H~P~~~~~~~~--~~~~~~~~l~~l~~~~~v~~vl~GH~H~~~~~~~~~~~~~ 224 (277)
T cd07378 150 AEEQLAWLEKTLAAS---TADWKIVVGHHPIYSSGEHG--PTSCLVDRLLPLLKKYKVDAYLSGHDHNLQHIKDDGSGTS 224 (277)
T ss_pred HHHHHHHHHHHHHhc---CCCeEEEEeCccceeCCCCC--CcHHHHHHHHHHHHHcCCCEEEeCCcccceeeecCCCCcE
Confidence 579999999999985 34899999999999765422 2256788999999999999999999999999987656777
Q ss_pred ec
Q 017284 372 FF 373 (374)
Q Consensus 372 ~~ 373 (374)
++
T Consensus 225 ~i 226 (277)
T cd07378 225 FV 226 (277)
T ss_pred EE
Confidence 65
No 7
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=99.97 E-value=4e-29 Score=236.78 Aligned_cols=199 Identities=15% Similarity=0.244 Sum_probs=141.9
Q ss_pred CCCcEEEEEecCCCCCCcHHHHH----HHHHh-CCCeEEecccccccCCCCccccchhhHH-HHHHHHHhh--hcCCeEE
Q 017284 159 DAPYTFGIIGDLGQTYNSLSTLK----HYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQSA--AYQPWIW 230 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~~~~l~----~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~-~~~~~~~~~--~~~P~~~ 230 (374)
+..++|+++||+|.+...+..++ .+.+. ++||||.+||+. .++....+ +.+|.. |.+...+.. ..+||++
T Consensus 24 ~~~l~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~FVls~GDNF-~~Gv~sv~-Dp~f~~~FE~vY~~~s~~L~~Pwy~ 101 (394)
T PTZ00422 24 KAQLRFASLGNWGTGSKQQKLVASYLKQYAKNERVTFLVSPGSNF-PGGVDGLN-DPKWKHCFENVYSEESGDMQIPFFT 101 (394)
T ss_pred CCeEEEEEEecCCCCchhHHHHHHHHHHHHHhCCCCEEEECCccc-cCCCCCcc-chhHHhhHhhhccCcchhhCCCeEE
Confidence 35899999999997655554444 33333 899999999998 45554444 667765 444444433 5789999
Q ss_pred cCCCcccccCCCCCCccccc------------------ccccccccCcCCCCCCCCceEEE----ec-------------
Q 017284 231 SAGNHEIEFMPNMGEVIPFK------------------SYLHRIATPYTASKSTNPLWYAI----RR------------- 275 (374)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~------------------~y~~~f~~p~~~~~~~~~~~ysf----~~------------- 275 (374)
++||||+..+.... ...+. ....||.|| +.||.+ ..
T Consensus 102 vLGNHDy~Gn~~AQ-i~r~~~~y~~~~~~~~~~y~~~~~~~~RW~mP--------~~yY~~~~~f~~~~~~~~~~~~~~~ 172 (394)
T PTZ00422 102 VLGQADWDGNYNAE-LLKGQNVYLNGHGQTDIEYDSNNDIYPKWIMP--------NYWYHYFTHFTDTSGPSLLKSGHKD 172 (394)
T ss_pred eCCcccccCCchhh-hccccccccccccccccccccccccCCCccCC--------chhheeeeeeecccccccccccCCC
Confidence 99999986432210 00010 123588888 467754 22
Q ss_pred CCEEEEEEeCCC-----CCC-CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCC
Q 017284 276 ASAHIIVLSSYS-----PYV-KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRV 349 (374)
Q Consensus 276 g~v~fi~Ldt~~-----~~~-~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~V 349 (374)
..+.||+|||.. ++. ....|++||+++|+.+ ++.++|+||+.|||+|+++..+ ....+++.|+|||++|+|
T Consensus 173 ~~v~fifiDT~~l~~~~~~~~~~~~~w~~L~~~L~~a-~k~a~WkIVvGHhPIySsG~hg--~~~~L~~~L~PLL~ky~V 249 (394)
T PTZ00422 173 MSVAFIFIDTWILSSSFPYKKVSERAWQDLKATLEYA-PKIADYIIVVGDKPIYSSGSSK--GDSYLSYYLLPLLKDAQV 249 (394)
T ss_pred CEEEEEEEECchhcccCCccccCHHHHHHHHHHHHhh-ccCCCeEEEEecCceeecCCCC--CCHHHHHHHHHHHHHcCc
Confidence 228999999953 122 2468999999999754 3567899999999999987642 446789999999999999
Q ss_pred cEEEEcCcccccccccccCCceec
Q 017284 350 DFIFAGHVHAYERSVRMSFPFHFF 373 (374)
Q Consensus 350 dlvlsGH~H~yeR~~~~~~~~h~~ 373 (374)
|++|+||+|+|||..+ ++++|+
T Consensus 250 dlYisGHDH~lq~i~~--~gt~yI 271 (394)
T PTZ00422 250 DLYISGYDRNMEVLTD--EGTAHI 271 (394)
T ss_pred CEEEEccccceEEecC--CCceEE
Confidence 9999999999999864 566665
No 8
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=99.95 E-value=3.6e-27 Score=217.75 Aligned_cols=198 Identities=18% Similarity=0.194 Sum_probs=140.1
Q ss_pred CCcEEEEEecCCCCCC--c---------------HHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHH
Q 017284 160 APYTFGIIGDLGQTYN--S---------------LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIE 220 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~--~---------------~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~ 220 (374)
.+++|+++||+|.+.. . ..+++.+.+. +||+||++||+++...... ....+|+.+.+.++
T Consensus 3 ~~~~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~-~~~~~~~~~~~~~~ 81 (262)
T cd07395 3 GPFYFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDE-LRERQVSDLKDVLS 81 (262)
T ss_pred CCEEEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchh-hHHHHHHHHHHHHh
Confidence 5899999999998731 1 1233445555 8999999999997544311 01234566666666
Q ss_pred HhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC------CCChH
Q 017284 221 QSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY------VKYTP 294 (374)
Q Consensus 221 ~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~------~~~~~ 294 (374)
.+...+|+++++||||+...+. ...+..|...| +..||+|++|+++||+|||.... ....+
T Consensus 82 ~~~~~vp~~~i~GNHD~~~~~~---~~~~~~f~~~~----------g~~~y~~~~~~~~~i~lds~~~~~~~~~~~~~~~ 148 (262)
T cd07395 82 LLDPDIPLVCVCGNHDVGNTPT---EESIKDYRDVF----------GDDYFSFWVGGVFFIVLNSQLFFDPSEVPELAQA 148 (262)
T ss_pred hccCCCcEEEeCCCCCCCCCCC---hhHHHHHHHHh----------CCcceEEEECCEEEEEeccccccCccccccchHH
Confidence 6656789999999999853221 11122233333 24589999999999999996422 23579
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEecccceecCCCCC----CCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCc
Q 017284 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY----MEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPF 370 (374)
Q Consensus 295 Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~----~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~ 370 (374)
|++||+++|+++.+.+.+++||++|+|++....... ......++.+.++|++++|+++||||+|.+++. ...++
T Consensus 149 ql~WL~~~L~~~~~~~~~~~iv~~H~P~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~V~~v~~GH~H~~~~~--~~~g~ 226 (262)
T cd07395 149 QDVWLEEQLEIAKESDCKHVIVFQHIPWFLEDPDEEDSYFNIPKSVRKPLLDKFKKAGVKAVFSGHYHRNAGG--RYGGL 226 (262)
T ss_pred HHHHHHHHHHHHHhccCCcEEEEECcCCccCCCCCCcccCCcCHHHHHHHHHHHHhcCceEEEECccccCCce--EECCE
Confidence 999999999987544677999999999986443211 123567889999999999999999999999874 35676
Q ss_pred eec
Q 017284 371 HFF 373 (374)
Q Consensus 371 h~~ 373 (374)
+++
T Consensus 227 ~~~ 229 (262)
T cd07395 227 EMV 229 (262)
T ss_pred EEE
Confidence 654
No 9
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.92 E-value=3e-24 Score=198.65 Aligned_cols=190 Identities=22% Similarity=0.286 Sum_probs=126.4
Q ss_pred cEEEEEecCCCCCC----------cHH----HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCC
Q 017284 162 YTFGIIGDLGQTYN----------SLS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227 (374)
Q Consensus 162 ~~f~v~gD~~~~~~----------~~~----~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P 227 (374)
|||+++||+|.... ... +++.+++.+||+||++||+++..... ....|+.+.+.+..+ .+|
T Consensus 1 ~r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~vv~~GDlv~~~~~~---~~~~~~~~~~~l~~l--~~p 75 (267)
T cd07396 1 FRFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDFVVQLGDIIDGDNAR---AEEALDAVLAILDRL--KGP 75 (267)
T ss_pred CeEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCEEEECCCeecCCCch---HHHHHHHHHHHHHhc--CCC
Confidence 69999999995532 112 23445455899999999999643310 124455555555443 489
Q ss_pred eEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCC-------------------
Q 017284 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP------------------- 288 (374)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~------------------- 288 (374)
+++++||||..... ..+.. . .. ....+..||+|+.++++||+||+...
T Consensus 76 ~~~v~GNHD~~~~~--------~~~~~-~-~~---~~~~~~~yysf~~~~~~~i~lds~~~~~~~~~~~~~~~~~~~~~~ 142 (267)
T cd07396 76 VHHVLGNHDLYNPS--------REYLL-L-YT---LLGLGAPYYSFSPGGIRFIVLDGYDISALGRPEDTPKAENADDNS 142 (267)
T ss_pred EEEecCcccccccc--------Hhhhh-c-cc---ccCCCCceEEEecCCcEEEEEeCCccccccCCCCChhhhhHHHhc
Confidence 99999999985321 00100 0 00 01134579999999999999999531
Q ss_pred -------------C--CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEE
Q 017284 289 -------------Y--VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFI 352 (374)
Q Consensus 289 -------------~--~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~Vdlv 352 (374)
+ ....+|++||+++|+++.. +..++||++|+|++...... ......++.+.+++.++ +|+++
T Consensus 143 ~~~~~~~~~~~~~~~G~l~~~Ql~WL~~~L~~~~~-~~~~viV~~Hhp~~~~~~~~-~~~~~~~~~~~~ll~~~~~V~~v 220 (267)
T cd07396 143 NLGLYLSEPRFVDWNGGIGEEQLQWLRNELQEADA-NGEKVIIFSHFPLHPESTSP-HGLLWNHEEVLSILRAYGCVKAC 220 (267)
T ss_pred hhhhhccCccceeccCcCCHHHHHHHHHHHHHHHh-cCCeEEEEEeccCCCCCCCc-cccccCHHHHHHHHHhCCCEEEE
Confidence 0 2357999999999998642 33568999999987654311 11112356788999995 79999
Q ss_pred EEcCcccccccccccCCceec
Q 017284 353 FAGHVHAYERSVRMSFPFHFF 373 (374)
Q Consensus 353 lsGH~H~yeR~~~~~~~~h~~ 373 (374)
|+||+|.++... .+|+.++
T Consensus 221 ~~GH~H~~~~~~--~~gi~~~ 239 (267)
T cd07396 221 ISGHDHEGGYAQ--RHGIHFL 239 (267)
T ss_pred EcCCcCCCCccc--cCCeeEE
Confidence 999999997443 5666654
No 10
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=99.91 E-value=9.8e-24 Score=192.18 Aligned_cols=184 Identities=18% Similarity=0.194 Sum_probs=128.4
Q ss_pred EEEEEecCCCCCCc-------------HHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCC
Q 017284 163 TFGIIGDLGQTYNS-------------LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227 (374)
Q Consensus 163 ~f~v~gD~~~~~~~-------------~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P 227 (374)
||+++||+|.+... ..+++.+.+. +||+||++||+++... ...|+.+.+.++.+ .+|
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~l~~~--~~p 72 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDLVLVTGDLTDDGS------PESYERLRELLAAL--PIP 72 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCEEEECccCCCCCC------HHHHHHHHHHHhhc--CCC
Confidence 69999999987431 2234455555 8999999999997532 34455666666655 689
Q ss_pred eEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC----CCChHHHHHHHHHH
Q 017284 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY----VKYTPQWWWLREEL 303 (374)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~----~~~~~Q~~WL~~~L 303 (374)
++.++||||... .+...|..... .....+|+|+.++++||+||+.... ....+|++||++.|
T Consensus 73 ~~~v~GNHD~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~lds~~~~~~~~~~~~~ql~wL~~~L 138 (240)
T cd07402 73 VYLLPGNHDDRA-----------AMRAVFPELPP---APGFVQYVVDLGGWRLILLDSSVPGQHGGELCAAQLDWLEAAL 138 (240)
T ss_pred EEEeCCCCCCHH-----------HHHHhhccccc---cccccceeEecCCEEEEEEeCCCCCCcCCEECHHHHHHHHHHH
Confidence 999999999742 12222211100 1345689999999999999996532 13578999999999
Q ss_pred hhccCCCCCeEEEEecccceecCCCCC-CCCHHHHHHHHHHHHHc-CCcEEEEcCcccccccccccCCceec
Q 017284 304 KKVDREKTPWLIVLMHVPLYSSNVVHY-MEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSVRMSFPFHFF 373 (374)
Q Consensus 304 ~~~~~~~~~w~iv~~H~P~y~~~~~~~-~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~~~~~~h~~ 373 (374)
++.. .+++|+++|+|++....... ......++.+.+++.++ +|+++|+||+|...+.. .+|++++
T Consensus 139 ~~~~---~~~~il~~H~pp~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~~v~~GH~H~~~~~~--~~g~~~~ 205 (240)
T cd07402 139 AEAP---DKPTLVFLHHPPFPVGIAWMDAIGLRNAEALAAVLARHPNVRAILCGHVHRPIDGS--WGGIPLL 205 (240)
T ss_pred HhCC---CCCEEEEECCCCccCCchhhhhhhCCCHHHHHHHHhcCCCeeEEEECCcCchHHeE--ECCEEEE
Confidence 9852 45688999999976532111 01112367899999999 99999999999976553 4777654
No 11
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=99.91 E-value=7.2e-24 Score=186.18 Aligned_cols=205 Identities=19% Similarity=0.291 Sum_probs=135.7
Q ss_pred EEECCCCCCCCCCcEEEEEecCCCCCCcHH-H----HHHHHHh-CCCeEEecccccccCCCCccccchhhH-HHHHHHH-
Q 017284 149 WFQTPPKIHPDAPYTFGIIGDLGQTYNSLS-T----LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWD-SWGRFIE- 220 (374)
Q Consensus 149 ~F~T~p~~~~~~~~~f~v~gD~~~~~~~~~-~----l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~-~~~~~~~- 220 (374)
++.-|+. ++..++|+++||+|..+.... . +..+.+. +.||||.+||++|.++..... +.+++ .|.+...
T Consensus 33 ~l~~p~~--~dgslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~-Dp~Fq~sF~nIYT~ 109 (336)
T KOG2679|consen 33 RLYDPAK--SDGSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSEN-DPRFQDSFENIYTA 109 (336)
T ss_pred hhcCCCC--CCCceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCC-ChhHHhhhhhcccC
Confidence 4555444 357899999999996544322 1 2234444 999999999999988864332 33332 2333322
Q ss_pred HhhhcCCeEEcCCCcccccCCCCCCccc--ccccccccccCcCCCCCCCCceEE------EecCCEEEEEEeCCC-----
Q 017284 221 QSAAYQPWIWSAGNHEIEFMPNMGEVIP--FKSYLHRIATPYTASKSTNPLWYA------IRRASAHIIVLSSYS----- 287 (374)
Q Consensus 221 ~~~~~~P~~~v~GNHD~~~~~~~~~~~~--~~~y~~~f~~p~~~~~~~~~~~ys------f~~g~v~fi~Ldt~~----- 287 (374)
|.+ +.||+.+.||||+..+-. .+.. +.....||..|. .||. +..-++.++|+|+..
T Consensus 110 pSL-QkpWy~vlGNHDyrGnV~--AQls~~l~~~d~RW~c~r--------sf~~~ae~ve~f~v~~~~f~~d~~~~~~~~ 178 (336)
T KOG2679|consen 110 PSL-QKPWYSVLGNHDYRGNVE--AQLSPVLRKIDKRWICPR--------SFYVDAEIVEMFFVDTTPFMDDTFTLCTDD 178 (336)
T ss_pred ccc-ccchhhhccCccccCchh--hhhhHHHHhhccceeccc--------HHhhcceeeeeeccccccchhhheeccccc
Confidence 333 459999999999865421 1111 334455666552 2221 111134445555422
Q ss_pred --CCC-------CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcc
Q 017284 288 --PYV-------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 288 --~~~-------~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 358 (374)
++. ....|+.||+..|++ +.++|+||+.|||+.+.+.+ +...+++++|.|||++++||++++||+|
T Consensus 179 ~ydw~~v~PR~~~~~~~l~~le~~L~~---S~a~wkiVvGHh~i~S~~~H--G~T~eL~~~LlPiL~~n~VdlY~nGHDH 253 (336)
T KOG2679|consen 179 VYDWRGVLPRVKYLRALLSWLEVALKA---SRAKWKIVVGHHPIKSAGHH--GPTKELEKQLLPILEANGVDLYINGHDH 253 (336)
T ss_pred ccccccCChHHHHHHHHHHHHHHHHHH---hhcceEEEecccceehhhcc--CChHHHHHHHHHHHHhcCCcEEEecchh
Confidence 111 125788999999999 78999999999999886643 3567899999999999999999999999
Q ss_pred cccccccccCCcee
Q 017284 359 AYERSVRMSFPFHF 372 (374)
Q Consensus 359 ~yeR~~~~~~~~h~ 372 (374)
+.+...-.-+++.|
T Consensus 254 cLQhis~~e~~iqf 267 (336)
T KOG2679|consen 254 CLQHISSPESGIQF 267 (336)
T ss_pred hhhhccCCCCCeeE
Confidence 99886655666655
No 12
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.90 E-value=6.3e-23 Score=188.36 Aligned_cols=190 Identities=17% Similarity=0.168 Sum_probs=122.6
Q ss_pred EEEEecCCCCCCcHH--------HHHHHHHhCCCeEEecccccccCCCC---ccccchhhHHHHHHHHHhhh--cCCeEE
Q 017284 164 FGIIGDLGQTYNSLS--------TLKHYMQSGGQSVLFLGDLSYADRYE---YNDVGIRWDSWGRFIEQSAA--YQPWIW 230 (374)
Q Consensus 164 f~v~gD~~~~~~~~~--------~l~~~~~~~~d~vl~~GD~~y~~~~~---~~~~~~~w~~~~~~~~~~~~--~~P~~~ 230 (374)
|++++|+|.+....+ .+..+.+.+||++|++||++...... ..+.+.+|+.|.+.+..... ..|++.
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 81 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPALVLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWFD 81 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCEEEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEEE
Confidence 789999998643111 22344445999999999999643211 11125678888777655432 589999
Q ss_pred cCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEE--EecCCEEEEEEeCCCC----------CCCChHHHHH
Q 017284 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYA--IRRASAHIIVLSSYSP----------YVKYTPQWWW 298 (374)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ys--f~~g~v~fi~Ldt~~~----------~~~~~~Q~~W 298 (374)
++||||+........ ....|..+.... .....+|. +..|+++||+|||... .....+|++|
T Consensus 82 v~GNHD~~~~~~~~~--~~~~~~~y~~~~-----~~~~~~~~~~~~~~~~~~I~Ldt~~~~~~~~~~~~~g~l~~~ql~w 154 (256)
T cd07401 82 IRGNHDLFNIPSLDS--ENNYYRKYSATG-----RDGSFSFSHTTRFGNYSFIGVDPTLFPGPKRPFNFFGSLDKKLLDR 154 (256)
T ss_pred eCCCCCcCCCCCccc--hhhHHHHhheec-----CCCccceEEEecCCCEEEEEEcCccCCCCCCCCceeccCCHHHHHH
Confidence 999999853221111 111122211111 01122333 3458999999999642 1235899999
Q ss_pred HHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccc
Q 017284 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRM 366 (374)
Q Consensus 299 L~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~ 366 (374)
|+++|++. .+.+++||++|+|++..... .....+ .+.++|++++|+++||||.|.+++-.|+
T Consensus 155 L~~~L~~~--~~~~~~IV~~HhP~~~~~~~---~~~~~~-~~~~ll~~~~v~~vl~GH~H~~~~~~p~ 216 (256)
T cd07401 155 LEKELEKS--TNSNYTIWFGHYPTSTIISP---SAKSSS-KFKDLLKKYNVTAYLCGHLHPLGGLEPV 216 (256)
T ss_pred HHHHHHhc--ccCCeEEEEEcccchhccCC---CcchhH-HHHHHHHhcCCcEEEeCCccCCCcceee
Confidence 99999975 34568999999998653221 111222 3899999999999999999999985554
No 13
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=99.87 E-value=1.4e-21 Score=174.67 Aligned_cols=150 Identities=20% Similarity=0.242 Sum_probs=109.4
Q ss_pred cEEEEEecCCCCCCc-H----HHHHHH----HHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh-hcCCeEEc
Q 017284 162 YTFGIIGDLGQTYNS-L----STLKHY----MQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQPWIWS 231 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~-~----~~l~~~----~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~-~~~P~~~v 231 (374)
|||+++||+|..... . ..++.+ .+.++|+||++||+++.... ..+|+.+.+.++.+. ..+|++++
T Consensus 1 f~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~iv~~GDl~~~~~~-----~~~~~~~~~~~~~l~~~~~p~~~~ 75 (214)
T cd07399 1 FTLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAFVLHLGDIVDDGDN-----DAEWEAADKAFARLDKAGIPYSVL 75 (214)
T ss_pred CEEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCEEEECCCccCCCCC-----HHHHHHHHHHHHHHHHcCCcEEEE
Confidence 689999999986431 1 222333 33489999999999964432 457888888888876 57999999
Q ss_pred CCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCC
Q 017284 232 AGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311 (374)
Q Consensus 232 ~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~ 311 (374)
+||||. ++.+|+ ....+|++||+++|++. +.
T Consensus 76 ~GNHD~------------------------------------------~~~ld~----~~~~~ql~WL~~~L~~~---~~ 106 (214)
T cd07399 76 AGNHDL------------------------------------------VLALEF----GPRDEVLQWANEVLKKH---PD 106 (214)
T ss_pred CCCCcc------------------------------------------hhhCCC----CCCHHHHHHHHHHHHHC---CC
Confidence 999993 122222 23579999999999984 34
Q ss_pred CeEEEEecccceecCCCCCCC-----CHHHHHHHHHHHHHc-CCcEEEEcCccccccccc
Q 017284 312 PWLIVLMHVPLYSSNVVHYME-----GESMRAVFESWFVHS-RVDFIFAGHVHAYERSVR 365 (374)
Q Consensus 312 ~w~iv~~H~P~y~~~~~~~~~-----~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~ 365 (374)
+++||++|+|++......... .+..++.|.++++++ +|++||+||+|.+.+...
T Consensus 107 ~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V~~v~~GH~H~~~~~~~ 166 (214)
T cd07399 107 RPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNVFMVLSGHVHGAGRTTL 166 (214)
T ss_pred CCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCEEEEEccccCCCceEEE
Confidence 568999999998654322111 123456788999999 799999999999988765
No 14
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=99.87 E-value=3.5e-21 Score=178.95 Aligned_cols=192 Identities=16% Similarity=0.144 Sum_probs=118.5
Q ss_pred EECCCCCCCCCCcEEEEEecCCCCCC---------c----HHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHH
Q 017284 150 FQTPPKIHPDAPYTFGIIGDLGQTYN---------S----LSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDS 214 (374)
Q Consensus 150 F~T~p~~~~~~~~~f~v~gD~~~~~~---------~----~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~ 214 (374)
.+|++.. ..+++|++++|+|.... . ..+++.+++. +||+||++||++.... ...+..
T Consensus 5 ~~~~~~~--~~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~vvitGDl~~~~~------~~~~~~ 76 (275)
T PRK11148 5 LTLPLAG--EARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDLIVATGDLAQDHS------SEAYQH 76 (275)
T ss_pred cccccCC--CCCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCEEEECCCCCCCCC------HHHHHH
Confidence 4565543 36899999999996321 1 1234444443 6999999999996322 334455
Q ss_pred HHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCC---CC-
Q 017284 215 WGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP---YV- 290 (374)
Q Consensus 215 ~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~---~~- 290 (374)
+.+.++.+ .+|+++++||||.... +...+... + ....++.+..++++||+|||... .+
T Consensus 77 ~~~~l~~l--~~Pv~~v~GNHD~~~~-----------~~~~~~~~--~---~~~~~~~~~~~~~~~i~Lds~~~g~~~G~ 138 (275)
T PRK11148 77 FAEGIAPL--RKPCVWLPGNHDFQPA-----------MYSALQDA--G---ISPAKHVLIGEHWQILLLDSQVFGVPHGE 138 (275)
T ss_pred HHHHHhhc--CCcEEEeCCCCCChHH-----------HHHHHhhc--C---CCccceEEecCCEEEEEecCCCCCCcCCE
Confidence 55555544 5799999999997421 11111100 0 11123334445699999999642 12
Q ss_pred CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCC-CCCCHHHHHHHHHHHHHc-CCcEEEEcCcccccccccccC
Q 017284 291 KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVH-YMEGESMRAVFESWFVHS-RVDFIFAGHVHAYERSVRMSF 368 (374)
Q Consensus 291 ~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~-~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~yeR~~~~~~ 368 (374)
.+.+|++||+++|++. +.+..||++|||+....... ........+.+.++++++ +|+++|+||+|..... ..+
T Consensus 139 l~~~ql~wL~~~L~~~---~~~~~vv~~hH~P~~~~~~~~d~~~l~n~~~l~~ll~~~~~v~~vl~GH~H~~~~~--~~~ 213 (275)
T PRK11148 139 LSEYQLEWLERKLADA---PERHTLVLLHHHPLPAGCAWLDQHSLRNAHELAEVLAKFPNVKAILCGHIHQELDL--DWN 213 (275)
T ss_pred eCHHHHHHHHHHHhhC---CCCCeEEEEcCCCCCCCcchhhccCCCCHHHHHHHHhcCCCceEEEecccChHHhc--eEC
Confidence 3689999999999985 23345666666554433211 011112346889999998 8999999999986432 234
Q ss_pred Ccee
Q 017284 369 PFHF 372 (374)
Q Consensus 369 ~~h~ 372 (374)
|+.+
T Consensus 214 gi~~ 217 (275)
T PRK11148 214 GRRL 217 (275)
T ss_pred CEEE
Confidence 5443
No 15
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=99.81 E-value=3.5e-19 Score=167.34 Aligned_cols=183 Identities=17% Similarity=0.196 Sum_probs=119.7
Q ss_pred HHHHHHHHHh--CCCeEEecccccccCCCCccc-cch--hhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCC----Ccc
Q 017284 177 LSTLKHYMQS--GGQSVLFLGDLSYADRYEYND-VGI--RWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMG----EVI 247 (374)
Q Consensus 177 ~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~-~~~--~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~----~~~ 247 (374)
..+++.+.+. +|||||++||++..+...... ... .+..+.+.++.....+|+++++||||........ ...
T Consensus 56 ~s~l~~i~~~~~~~dfii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GNHD~~p~~~~~~~~~~~~ 135 (296)
T cd00842 56 ESALEAIKKNHPKPDFILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGNHDSYPVNQFPPNNSPSW 135 (296)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCCCCCCcccccCCcccccH
Confidence 3456667776 899999999999765432111 011 2445556666666789999999999985321110 111
Q ss_pred cccccccccc--cCcCCC-CCCCCceEEEe-cCCEEEEEEeCCCCC-----------CCChHHHHHHHHHHhhccCCCCC
Q 017284 248 PFKSYLHRIA--TPYTAS-KSTNPLWYAIR-RASAHIIVLSSYSPY-----------VKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 248 ~~~~y~~~f~--~p~~~~-~~~~~~~ysf~-~g~v~fi~Ldt~~~~-----------~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
.+..+...|. +|..+. ....+.||++. .++++||+|||...+ .....|++||+++|+++++. ..
T Consensus 136 ~~~~~~~~w~~~l~~~~~~~~~~ggYY~~~~~~~l~vI~Lnt~~~~~~~~~~~~~~~~~~~~Ql~WL~~~L~~a~~~-~~ 214 (296)
T cd00842 136 LYDALAELWKSWLPEEAEETFKKGGYYSVPVKPGLRVISLNTNLYYKKNFWLLGSNETDPAGQLQWLEDELQEAEQA-GE 214 (296)
T ss_pred HHHHHHHHHHhhcCHHHHHHhhcceEEEEEcCCCeEEEEEeCccccccChhhhccCCCCHHHHHHHHHHHHHHHHHC-CC
Confidence 1222223332 232111 11346789998 788999999996421 12478999999999997432 34
Q ss_pred eEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcCccccccc
Q 017284 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAYERS 363 (374)
Q Consensus 313 w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~yeR~ 363 (374)
.++|++|+|+...... ......+.+.+++++|+ |.++|+||+|..+-.
T Consensus 215 ~v~I~~HiPp~~~~~~---~~~~~~~~~~~ii~~y~~~i~~~~~GH~H~d~~~ 264 (296)
T cd00842 215 KVWIIGHIPPGVNSYD---TLENWSERYLQIINRYSDTIAGQFFGHTHRDEFR 264 (296)
T ss_pred eEEEEeccCCCCcccc---cchHHHHHHHHHHHHHHHhhheeeecccccceEE
Confidence 5788899999764322 11356788999999997 778999999996554
No 16
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.78 E-value=1.1e-19 Score=154.97 Aligned_cols=192 Identities=20% Similarity=0.185 Sum_probs=99.5
Q ss_pred cEEEEEecCCCCCCcH----HHHH-HHHHhCCCeEEecccccccCCCCccccchhhHHHH-HHHHHhhhcCCeEEcCCCc
Q 017284 162 YTFGIIGDLGQTYNSL----STLK-HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWG-RFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~----~~l~-~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~-~~~~~~~~~~P~~~v~GNH 235 (374)
+||+++||+|...... ..+. ...+.++|+||++||+++.... ...+.... ..........|+++++|||
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~GNH 75 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPDFIIFLGDLVDGGNP-----SEEWRAQFWFFIRLLNPKIPVYFILGNH 75 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTSEEEEESTSSSSSSH-----HHHHHHHHHHHHHHHHTTTTEEEEE-TT
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCCEEEeeccccccccc-----cccchhhhccchhhhhcccccccccccc
Confidence 6999999999975433 2222 2333499999999999976543 11111111 1234445679999999999
Q ss_pred ccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEE
Q 017284 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLI 315 (374)
Q Consensus 236 D~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~i 315 (374)
|............................ .... ........................+..|+...+....+...+++|
T Consensus 76 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 153 (200)
T PF00149_consen 76 DYYSGNSFYGFYDYQFEDYYGNYNYYYSY-FNNK-VIFDNDNFWFNSGNNEYPDYGMEAQQEWWLWLLLLLEAKNDDPVI 153 (200)
T ss_dssp SSHHHHHHHHHHHHHHSSEEECSSEEECT-ESSE-EEEEETTEEEEEHCCHTHHSEHHHHHHHHHHHHHHHHEEEESEEE
T ss_pred ccceecccccccccccccccccccccccc-Ccce-eeecccccccccccccccccccccchhccccccccccccccccee
Confidence 98632100000000000000000000000 0000 111112222222211111111222333333322222225678999
Q ss_pred EEecccceecCCCCCC--CCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 316 VLMHVPLYSSNVVHYM--EGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 316 v~~H~P~y~~~~~~~~--~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
|++|+|+++....... .....++.+..++.+++|+++|+||+|.|
T Consensus 154 v~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~GH~H~~ 200 (200)
T PF00149_consen 154 VFTHHPPYSSSSDSSSYGNESKGREALEELLKKYNVDLVLSGHTHRY 200 (200)
T ss_dssp EEESSSSSTTSSSTHHHSSEEEHHHHHHHHHHHTTCSEEEEESSSSE
T ss_pred EEEecCCCCccccccccchhhccHHHHHHHHhhCCCCEEEeCceecC
Confidence 9999999876543210 11346788999999999999999999987
No 17
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=99.77 E-value=5.7e-18 Score=154.96 Aligned_cols=167 Identities=22% Similarity=0.263 Sum_probs=106.3
Q ss_pred HHHHHHh-CCCeEEecccccccCCCCccccchhhHH-HHHHHH---HhhhcCCeEEcCCCcccccCCCCCCccccccccc
Q 017284 180 LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIE---QSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLH 254 (374)
Q Consensus 180 l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~-~~~~~~---~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~ 254 (374)
+..+.+. +||+||++||++..+.. .. ..+|.+ +.++.+ +....+|++.++||||+...... .......|..
T Consensus 37 ~~~~~~~l~PD~vv~lGDL~d~G~~--~~-~~~~~~~~~rf~~i~~~~~~~~pv~~VpGNHDig~~~~~-~~~~~~rf~~ 112 (257)
T cd08163 37 WRYMQKQLKPDSTIFLGDLFDGGRD--WA-DEYWKKEYNRFMRIFDPSPGRKMVESLPGNHDIGFGNGV-VLPVRQRFEK 112 (257)
T ss_pred HHHHHHhcCCCEEEEecccccCCee--Cc-HHHHHHHHHHHHHHhcCCCccceEEEeCCCcccCCCCCC-CHHHHHHHHH
Confidence 3334443 89999999999864321 11 345543 333333 22224799999999998543211 1112234555
Q ss_pred ccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC-----CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCC
Q 017284 255 RIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-----VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVH 329 (374)
Q Consensus 255 ~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~ 329 (374)
+|. ...++|++|+++||+|||..-. ....+|.+||++.|+.. .....+||++|+|+|......
T Consensus 113 ~Fg----------~~~~~~~~~~~~fV~Lds~~l~~~~~~~~~~~~~~~l~~~l~~~--~~~~p~ILl~H~Plyr~~~~~ 180 (257)
T cd08163 113 YFG----------PTSRVIDVGNHTFVILDTISLSNKDDPDVYQPPREFLHSFSAMK--VKSKPRILLTHVPLYRPPNTS 180 (257)
T ss_pred HhC----------CCceEEEECCEEEEEEccccccCCcccccchhHHHHHHhhhhcc--CCCCcEEEEeccccccCCCCC
Confidence 552 2358999999999999996321 23467999999999874 233458999999999653211
Q ss_pred CC------------CCHH----H-HHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 330 YM------------EGES----M-RAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 330 ~~------------~~~~----~-r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
.+ .+.. + .+.-..||.+.++.+||+||+|.|=.
T Consensus 181 cg~~re~~~~~~~~~g~~yq~~l~~~~s~~il~~~~P~~vfsGhdH~~C~ 230 (257)
T cd08163 181 CGPLRESKTPLPYGYGYQYQNLLEPSLSEVILKAVQPVIAFSGDDHDYCE 230 (257)
T ss_pred CCCccccCCCCCCCCCccceeecCHHHHHHHHHhhCCcEEEecCCCccce
Confidence 10 0100 1 23445778888999999999999854
No 18
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=99.73 E-value=4.9e-17 Score=143.92 Aligned_cols=150 Identities=19% Similarity=0.240 Sum_probs=98.1
Q ss_pred CcEEEEEecCCCCCCc---------HHH---HHHHH-HhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cC
Q 017284 161 PYTFGIIGDLGQTYNS---------LST---LKHYM-QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQ 226 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~---------~~~---l~~~~-~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~ 226 (374)
.+||++++|+|..... ..+ +.++. +.+||+||++||+++..... ...+..+.+.++++.. .+
T Consensus 2 ~~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vv~~GDl~~~~~~~----~~~~~~~~~~~~~l~~~~~ 77 (199)
T cd07383 2 KFKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDLVVLTGDLITGENTN----DNSTSALDKAVSPMIDRKI 77 (199)
T ss_pred ceEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCEEEECCccccCCCCc----hHHHHHHHHHHHHHHHcCC
Confidence 5899999999986432 122 33333 33899999999999754431 1123455555565543 69
Q ss_pred CeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhc
Q 017284 227 PWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKV 306 (374)
Q Consensus 227 P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~ 306 (374)
|+++++||||.. -.....|++||+++|++.
T Consensus 78 p~~~~~GNHD~~--------------------------------------------------g~l~~~ql~wL~~~l~~~ 107 (199)
T cd07383 78 PWAATFGNHDGY--------------------------------------------------DWIRPSQIEWFKETSAAL 107 (199)
T ss_pred CEEEECccCCCC--------------------------------------------------CCCCHHHHHHHHHHHHHH
Confidence 999999999910 013468999999999986
Q ss_pred c--CCCCCeEEEEecccceecCCC---------CCCC---CHHHHH-HHHHHHHHcCCcEEEEcCcccccccc
Q 017284 307 D--REKTPWLIVLMHVPLYSSNVV---------HYME---GESMRA-VFESWFVHSRVDFIFAGHVHAYERSV 364 (374)
Q Consensus 307 ~--~~~~~w~iv~~H~P~y~~~~~---------~~~~---~~~~r~-~l~~ll~~~~VdlvlsGH~H~yeR~~ 364 (374)
. +....+.++++|+|+...... ...+ ...... .+..+.+..+|+++|+||+|.++...
T Consensus 108 ~~~~~~~~~~l~f~H~P~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~v~~v~~GH~H~~~~~~ 180 (199)
T cd07383 108 KKKYGKPIPSLAFFHIPLPEYREVWEGKGKVPGINNEKVCCPKINSGLFKALLERGDVKGVFCGHDHGNDFCG 180 (199)
T ss_pred hhccCCCCcceEEEecChHHHHhhhcccCCCCccCCcccCCCcCCcHHHHHHHHcCCeEEEEeCCCCCcceec
Confidence 3 234568999999998653210 0001 011122 33444566789999999999987654
No 19
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=99.73 E-value=3.8e-17 Score=147.95 Aligned_cols=182 Identities=17% Similarity=0.139 Sum_probs=111.9
Q ss_pred EEEecCCCCC--------Cc---HHHHHHHHHh------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCC
Q 017284 165 GIIGDLGQTY--------NS---LSTLKHYMQS------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP 227 (374)
Q Consensus 165 ~v~gD~~~~~--------~~---~~~l~~~~~~------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P 227 (374)
.+++|+|... -. .+.++.+.+. +||+||++||+++... ........+.++.+ ..|
T Consensus 2 ~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D~viiaGDl~~~~~------~~~~~~~l~~l~~l--~~~ 73 (232)
T cd07393 2 FAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPEDIVLIPGDISWAMK------LEEAKLDLAWIDAL--PGT 73 (232)
T ss_pred eEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCCEEEEcCCCccCCC------hHHHHHHHHHHHhC--CCC
Confidence 4689998762 11 3445555554 9999999999984321 11122222333332 347
Q ss_pred eEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCC----CC-------------C
Q 017284 228 WIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS----PY-------------V 290 (374)
Q Consensus 228 ~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~----~~-------------~ 290 (374)
+++|+||||+... . ...+.+.+. ..+. ......++.++++.|++++... .+ .
T Consensus 74 v~~V~GNHD~~~~----~---~~~~~~~l~--~~~~--~~~~n~~~~~~~i~i~G~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (232)
T cd07393 74 KVLLKGNHDYWWG----S---ASKLRKALE--ESRL--ALLFNNAYIDDDVAICGTRGWDNPGNPWPPINETLKVEEDEK 142 (232)
T ss_pred eEEEeCCccccCC----C---HHHHHHHHH--hcCe--EEeccCcEEECCEEEEEEEeeCCCCCccccccccccchhHHH
Confidence 8999999997311 0 011111111 0000 0001234566789999976311 11 0
Q ss_pred CChHHHHHHHHHHhhccCC-CCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccc---
Q 017284 291 KYTPQWWWLREELKKVDRE-KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRM--- 366 (374)
Q Consensus 291 ~~~~Q~~WL~~~L~~~~~~-~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~--- 366 (374)
....|++||++.|+++... ...++|+++|+|++.... . .+.+..++++++++++|+||+|.+++..|+
T Consensus 143 ~~~~~l~~l~~~L~~~~~~~~~~~~i~~~H~p~~~~~~----~----~~~~~~~~~~~~v~~vl~GH~H~~~~~~~~~~~ 214 (232)
T cd07393 143 IFERELERLELSLKAAKKREKEKIKIVMLHYPPANENG----D----DSPISKLIEEYGVDICVYGHLHGVGRDRAINGE 214 (232)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCcCCCC----C----HHHHHHHHHHcCCCEEEECCCCCCcccccccce
Confidence 1256899999999985322 224789999999876432 1 235678889999999999999999988776
Q ss_pred cCCceec
Q 017284 367 SFPFHFF 373 (374)
Q Consensus 367 ~~~~h~~ 373 (374)
.+|++|+
T Consensus 215 ~~gi~~~ 221 (232)
T cd07393 215 RGGIRYQ 221 (232)
T ss_pred ECCEEEE
Confidence 7888765
No 20
>TIGR03767 P_acnes_RR metallophosphoesterase, PPA1498 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149 but with long inserts separating some of the shared motifs such that the homology is apparent only through multiple sequence alignment. Members of this protein family, in general, have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. Members include YP_056203.1 from Propionibacterium acnes KPA171202.
Probab=99.66 E-value=6.6e-16 Score=149.09 Aligned_cols=94 Identities=14% Similarity=0.205 Sum_probs=72.2
Q ss_pred CCceEEEe-cCCEEEEEEeCCCCC-----CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCC-----CCCHH
Q 017284 267 NPLWYAIR-RASAHIIVLSSYSPY-----VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHY-----MEGES 335 (374)
Q Consensus 267 ~~~~ysf~-~g~v~fi~Ldt~~~~-----~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~-----~~~~~ 335 (374)
+..||+|+ .++++||+|||.... ...++|++||+++|++ .+.+++||++|||++....... .....
T Consensus 290 G~~YYSFd~~ggvrfIvLDSt~~~G~~~G~L~eeQL~WLeqeLa~---a~~k~VVVf~HHPp~s~g~~~~Dp~~pg~~~~ 366 (496)
T TIGR03767 290 GTGYYTFDIAGGVRGISMDTTNRAGGDEGSLGQTQFKWIKDTLRA---SSDTLFVLFSHHTSWSMVNELTDPVDPGEKRH 366 (496)
T ss_pred CCceEEEEeECCEEEEEEeCCCcCCCcCCccCHHHHHHHHHHHhc---CCCCCEEEEECCCCcccccccccccccccccc
Confidence 56799999 899999999997431 2368999999999997 3456899999999987543110 01112
Q ss_pred HHHHHHHHHHHc-CCcEEEEcCccccccc
Q 017284 336 MRAVFESWFVHS-RVDFIFAGHVHAYERS 363 (374)
Q Consensus 336 ~r~~l~~ll~~~-~VdlvlsGH~H~yeR~ 363 (374)
..++|.++|.++ +|.++|+||.|....+
T Consensus 367 n~~eLldLL~~ypnV~aVfsGHvH~n~i~ 395 (496)
T TIGR03767 367 LGTELVSLLLEHPNVLAWVNGHTHSNKIT 395 (496)
T ss_pred CHHHHHHHHhcCCCceEEEECCcCCCccc
Confidence 346899999998 7999999999987643
No 21
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=99.66 E-value=1.2e-15 Score=133.22 Aligned_cols=168 Identities=12% Similarity=0.063 Sum_probs=101.4
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCC
Q 017284 164 FGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNM 243 (374)
Q Consensus 164 f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~ 243 (374)
++++||+|........ ..+.+.++|+||++||++.... ......+ +.++. ...|+++++||||.....
T Consensus 1 i~~~sD~H~~~~~~~~-~~~~~~~~D~vv~~GDl~~~~~------~~~~~~~-~~l~~--~~~p~~~v~GNHD~~~~~-- 68 (188)
T cd07392 1 ILAISDIHGDVEKLEA-IILKAEEADAVIVAGDITNFGG------KEAAVEI-NLLLA--IGVPVLAVPGNCDTPEIL-- 68 (188)
T ss_pred CEEEEecCCCHHHHHH-HHhhccCCCEEEECCCccCcCC------HHHHHHH-HHHHh--cCCCEEEEcCCCCCHHHH--
Confidence 5789999986533222 2344458999999999996432 1111111 22322 257999999999964210
Q ss_pred CCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCC------CCCChHHHHHHHHHHhhccCCCCCeEEEE
Q 017284 244 GEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP------YVKYTPQWWWLREELKKVDREKTPWLIVL 317 (374)
Q Consensus 244 ~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~------~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~ 317 (374)
......... ..+ ..+.++++.|+++++... .....+|++|+ +.|+. ...+.+|++
T Consensus 69 ------~~~~~~~~~-------~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~-~~l~~---~~~~~~ilv 129 (188)
T cd07392 69 ------GLLTSAGLN-------LHG--KVVEVGGYTFVGIGGSNPTPFNTPIELSEEEIVSD-GRLNN---LLAKNLILV 129 (188)
T ss_pred ------HhhhcCcEe-------cCC--CEEEECCEEEEEeCCCCCCCCCCccccCHHHHHHh-hhhhc---cCCCCeEEE
Confidence 000000000 011 235578899999987421 12356889998 45543 344568999
Q ss_pred ecccceecCCCC-CCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 318 MHVPLYSSNVVH-YMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 318 ~H~P~y~~~~~~-~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
+|+|++...... ......-.+.+..++++++++++|+||+|.-..
T Consensus 130 ~H~pp~~~~~d~~~~~~~~g~~~l~~li~~~~~~~~l~GH~H~~~~ 175 (188)
T cd07392 130 THAPPYGTAVDRVSGGFHVGSKAIRKFIEERQPLLCICGHIHESRG 175 (188)
T ss_pred ECCCCcCCcccccCCCCccCCHHHHHHHHHhCCcEEEEeccccccc
Confidence 999997631111 111011245788889999999999999999643
No 22
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=99.66 E-value=2.1e-15 Score=137.38 Aligned_cols=186 Identities=13% Similarity=0.081 Sum_probs=108.5
Q ss_pred EEEEEecCCCCCCc---HH----HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 163 TFGIIGDLGQTYNS---LS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 163 ~f~v~gD~~~~~~~---~~----~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
||++++|+|..... .. .+..+.+.++|+||++||++... . +...+.+.+... ...|++.++|||
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~vv~~GDl~~~~-------~-~~~~~~~~l~~~-~~~pv~~v~GNH 71 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDHLHIAGDISNDF-------Q-RSLPFIEKLQEL-KGIKVTFNAGNH 71 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCEEEECCccccch-------h-hHHHHHHHHHHh-cCCcEEEECCCC
Confidence 58999999975322 22 33344555999999999999521 1 112333333332 458999999999
Q ss_pred ccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCC--------------------------
Q 017284 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPY-------------------------- 289 (374)
Q Consensus 236 D~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~-------------------------- 289 (374)
|...... +..+...+. + ....+.++.+..++++|++++...++
T Consensus 72 D~~~~~~------~~~~~~~~~-~----~~l~~~~~~~~~~~~~~ig~~gw~d~~~~~~~~~~~~~~~~~d~~~~~~~~~ 140 (239)
T TIGR03729 72 DMLKDLT------YEEIESNDS-P----LYLHNRFIDIPNTQWRIIGNNGWYDYSFSNDKTSKEILRWKKSFWFDRRIKR 140 (239)
T ss_pred CCCCCCC------HHHHHhccc-h----hhhcccccccCCCceEEEeeccceecccccccCHHHHHHhhhcEEeecccCC
Confidence 9741111 111111110 0 00122333344467888888832111
Q ss_pred C-----CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCC------CCCCCC--HHHHHHHHHHHHHcCCcEEEEcC
Q 017284 290 V-----KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNV------VHYMEG--ESMRAVFESWFVHSRVDFIFAGH 356 (374)
Q Consensus 290 ~-----~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~------~~~~~~--~~~r~~l~~ll~~~~VdlvlsGH 356 (374)
. ...+|++||++.|++. ....+||++|+|+..... ..+... ......+.+++++++|+++|+||
T Consensus 141 ~~~~~~~~~~~l~~l~~~l~~~---~~~~~ivvtH~pP~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~~v~~~i~GH 217 (239)
T TIGR03729 141 PMSDPERTAIVLKQLKKQLNQL---DNKQVIFVTHFVPHRDFIYVPMDHRRFDMFNAFLGSQHFGQLLVKYEIKDVIFGH 217 (239)
T ss_pred CCChHHHHHHHHHHHHHHHHhc---CCCCEEEEEcccchHHHhcCCCCCcchhhhhhccChHHHHHHHHHhCCCEEEECC
Confidence 1 1257899999999875 223478889998865221 111110 11136788999999999999999
Q ss_pred cccccccccccCCcee
Q 017284 357 VHAYERSVRMSFPFHF 372 (374)
Q Consensus 357 ~H~yeR~~~~~~~~h~ 372 (374)
+|.-.... ..+++.+
T Consensus 218 ~H~~~~~~-~i~~~~~ 232 (239)
T TIGR03729 218 LHRRFGPL-TIGGTTY 232 (239)
T ss_pred ccCCCCCE-EECCEEE
Confidence 99965322 2255544
No 23
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=99.62 E-value=8.3e-15 Score=137.13 Aligned_cols=179 Identities=19% Similarity=0.180 Sum_probs=111.8
Q ss_pred cEEEEEecCCCC--CC-cHHH----HHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCC
Q 017284 162 YTFGIIGDLGQT--YN-SLST----LKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (374)
Q Consensus 162 ~~f~v~gD~~~~--~~-~~~~----l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GN 234 (374)
++|++++|.|.. .. .... ++.+...+||+||++||++.. +. ...+....++++......|++++|||
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~~v~tGDl~~~-~~-----~~~~~~~~~~l~~~~~~~~~~~vpGN 74 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDLLVVTGDLTND-GE-----PEEYRRLKELLARLELPAPVIVVPGN 74 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCEEEEccCcCCC-CC-----HHHHHHHHHHHhhccCCCceEeeCCC
Confidence 489999999998 22 2223 344444589999999999975 22 33334455555544456789999999
Q ss_pred cccccCCCCCCcccccccccccccCcCCCCCCCCceEEEec-CCEEEEEEeCCCCC----CCChHHHHHHHHHHhhccCC
Q 017284 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRR-ASAHIIVLSSYSPY----VKYTPQWWWLREELKKVDRE 309 (374)
Q Consensus 235 HD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~-g~v~fi~Ldt~~~~----~~~~~Q~~WL~~~L~~~~~~ 309 (374)
||..... ...+...+.... ..+-.... ++++++.+|+.... ..+..|++||++.|++....
T Consensus 75 HD~~~~~-------~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~d~~~~~~~~G~~~~~q~~~l~~~l~~~~~~ 140 (301)
T COG1409 75 HDARVVN-------GEAFSDQFFNRY-------AVLVGACSSGGWRVIGLDSSVPGVPLGRLGAEQLDWLEEALAAAPER 140 (301)
T ss_pred CcCCchH-------HHHhhhhhcccC-------cceEeeccCCceEEEEecCCCCCCCCCEECHHHHHHHHHHHHhCccc
Confidence 9985311 111211111110 11111112 67899999996542 24789999999999985322
Q ss_pred CCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcCcccc
Q 017284 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAY 360 (374)
Q Consensus 310 ~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~y 360 (374)
....+|+++|+|+.................+..++..++ |+++|+||.|.-
T Consensus 141 ~~~~~v~~~hh~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~vl~GH~H~~ 193 (301)
T COG1409 141 AKDTVVVLHHHPLPSPGTGVDRVALRDAGELLDVLIAHGNDVRLVLSGHIHLA 193 (301)
T ss_pred cCceEEEecCCCCCCCCCccceeeeecchhHHHHHHhcCCceEEEEeCccccc
Confidence 112457777777665443322222223346667888888 999999999986
No 24
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=99.54 E-value=2.4e-14 Score=122.96 Aligned_cols=145 Identities=15% Similarity=0.256 Sum_probs=87.4
Q ss_pred EEEEecCCCCCCcHHHH--HHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCC
Q 017284 164 FGIIGDLGQTYNSLSTL--KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (374)
Q Consensus 164 f~v~gD~~~~~~~~~~l--~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~ 241 (374)
|+++||+|......... ..+.+.++|+++++||+++... . ..+...........|++.++||||...
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d~li~~GDi~~~~~------~---~~~~~~~~~~~~~~~v~~v~GNHD~~~-- 69 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDADILVLAGDIGYLTD------A---PRFAPLLLALKGFEPVIYVPGNHEFYV-- 69 (166)
T ss_pred CceEccccccCccccccccccCCCCCCCEEEECCCCCCCcc------h---HHHHHHHHhhcCCccEEEeCCCcceEE--
Confidence 57899999875432221 1223348999999999996432 1 122222333345689999999999731
Q ss_pred CCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccc
Q 017284 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVP 321 (374)
Q Consensus 242 ~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P 321 (374)
+| . ....|+.+.. ...++.+|+.++++ +.+||++|+|
T Consensus 70 -------------~~--~------G~~~w~~~~~---------------~~~~~~~~~~~d~~-------~~~vv~~Hhp 106 (166)
T cd07404 70 -------------RI--I------GTTLWSDISL---------------FGEAAARMRMNDFR-------GKTVVVTHHA 106 (166)
T ss_pred -------------EE--E------eeecccccCc---------------cchHHHHhCCCCCC-------CCEEEEeCCC
Confidence 00 0 0012332211 12345555555544 3579999999
Q ss_pred ceecCCCC----CCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 322 LYSSNVVH----YMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 322 ~y~~~~~~----~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
++...... .......++.+..++++.+|+++++||+|....
T Consensus 107 P~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~i~GH~H~~~~ 151 (166)
T cd07404 107 PSPLSLAPQYGDSLVNAAFAVDLDDLILADPIDLWIHGHTHFNFD 151 (166)
T ss_pred CCccccCccccCCCcchhhhhccHhHHhhcCCCEEEECCccccce
Confidence 98754321 111224456677888899999999999998743
No 25
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=99.54 E-value=6.7e-14 Score=125.72 Aligned_cols=186 Identities=13% Similarity=0.084 Sum_probs=103.8
Q ss_pred EEEEEecCCCCCCc------------HHHHHH----HHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh-hc
Q 017284 163 TFGIIGDLGQTYNS------------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AY 225 (374)
Q Consensus 163 ~f~v~gD~~~~~~~------------~~~l~~----~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~-~~ 225 (374)
||++++|+|.+... ..++++ +.+.++|+||++||++...... ...+..+.+.++.+. ..
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~GD~~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDFVLIAGDLFDSNNPS----PEALELLIEALRRLKEAG 76 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCEEEECCcccCCCCCC----HHHHHHHHHHHHHHHHCC
Confidence 68999999987421 122333 3344999999999998644311 234455666666654 47
Q ss_pred CCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhh
Q 017284 226 QPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKK 305 (374)
Q Consensus 226 ~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~ 305 (374)
+|+++++||||....... ......+....... ............++.+++.|++++..... ....+.++++..+.+
T Consensus 77 ~~v~~~~GNHD~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~i~g~~~~~~~-~~~~~~~~~~~~~~~ 152 (223)
T cd00840 77 IPVFIIAGNHDSPSRLGA--LSPLLALSGLHLVG-VEEDVLTPLLLPKGGTGVAIYGLPYLRRS-RLRDLLADAELRPRP 152 (223)
T ss_pred CCEEEecCCCCCcccccc--ccchHhhCcEEEEc-ccCcceeEEEeccCCeEEEEEECCCCCHH-HHHHHHHHHHHHhhc
Confidence 899999999998542110 00000011000000 00000112233344556888888654321 123344444555544
Q ss_pred ccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 306 VDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 306 ~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
. .....+|++.|.|+.......... .......+...++|++++||.|....
T Consensus 153 ~--~~~~~~Il~~H~~~~~~~~~~~~~----~~~~~~~~~~~~~d~v~~GH~H~~~~ 203 (223)
T cd00840 153 L--DPDDFNILLLHGGVAGAGPSDSER----APFVPEALLPAGFDYVALGHIHRPQI 203 (223)
T ss_pred c--CCCCcEEEEEeeeeecCCCCcccc----cccCcHhhcCcCCCEEECCCcccCee
Confidence 3 345678999999986543221110 12333455678899999999999653
No 26
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=99.53 E-value=2.2e-13 Score=121.70 Aligned_cols=176 Identities=11% Similarity=0.129 Sum_probs=101.4
Q ss_pred CcEEEEEecCCCCCCcHHHH-HHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cCCeEEcCCCcccc
Q 017284 161 PYTFGIIGDLGQTYNSLSTL-KHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEIE 238 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l-~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~P~~~v~GNHD~~ 238 (374)
..|++++||+|......+.+ +.+.+.++|+||++||+++.... . +.+.++++.+.. ..|+++++||||..
T Consensus 4 ~~kIl~iSDiHgn~~~le~l~~~~~~~~~D~vv~~GDl~~~g~~-----~---~~~~~~l~~l~~l~~pv~~V~GNhD~~ 75 (224)
T cd07388 4 VRYVLATSNPKGDLEALEKLVGLAPETGADAIVLIGNLLPKAAK-----S---EDYAAFFRILGEAHLPTFYVPGPQDAP 75 (224)
T ss_pred eeEEEEEEecCCCHHHHHHHHHHHhhcCCCEEEECCCCCCCCCC-----H---HHHHHHHHHHHhcCCceEEEcCCCChH
Confidence 56899999999754333322 22333489999999999964311 1 334444444433 47999999999963
Q ss_pred cCCCCCCcccccccccccccCcCCCCCCCCceEEEec-CCEEEEEEeCCCCC--CCChHHH----HHHHHH-HhhccCCC
Q 017284 239 FMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRR-ASAHIIVLSSYSPY--VKYTPQW----WWLREE-LKKVDREK 310 (374)
Q Consensus 239 ~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~-g~v~fi~Ldt~~~~--~~~~~Q~----~WL~~~-L~~~~~~~ 310 (374)
...... ..|......|.. .. ..+.+ ..+ |++.|+.|+....+ ...++|. +||.+. |+...+..
T Consensus 76 v~~~l~-----~~~~~~~~~p~~-~~-lh~~~--~~~~g~~~~~GlGGs~~~~~e~sE~e~~~~~~~~~~~~l~~~~~~~ 146 (224)
T cd07388 76 LWEYLR-----EAYNAELVHPEI-RN-VHETF--AFWRGPYLVAGVGGEIADEGEPEEHEALRYPAWVAEYRLKALWELK 146 (224)
T ss_pred HHHHHH-----HHhcccccCccc-ee-cCCCe--EEecCCeEEEEecCCcCCCCCcCHHHHhhhhhhHHHHHHHHHHhCC
Confidence 100000 011100001110 00 11122 334 55999999875433 2344542 665442 22221123
Q ss_pred CCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcc
Q 017284 311 TPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 311 ~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 358 (374)
.+..|+++|+|+|..+..|. -.+.+..++++++..+++|||+|
T Consensus 147 ~~~~VLv~H~PP~g~g~~h~-----GS~alr~~I~~~~P~l~i~GHih 189 (224)
T cd07388 147 DYRKVFLFHTPPYHKGLNEQ-----GSHEVAHLIKTHNPLVVLVGGKG 189 (224)
T ss_pred CCCeEEEECCCCCCCCCCcc-----CHHHHHHHHHHhCCCEEEEcCCc
Confidence 45689999999998743231 23467788999999999999988
No 27
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=99.53 E-value=7e-14 Score=117.04 Aligned_cols=116 Identities=21% Similarity=0.226 Sum_probs=82.9
Q ss_pred EEEEecCCCCCCcHH-----------HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc-CCeEEc
Q 017284 164 FGIIGDLGQTYNSLS-----------TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY-QPWIWS 231 (374)
Q Consensus 164 f~v~gD~~~~~~~~~-----------~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~-~P~~~v 231 (374)
|++++|+|.+..... .++.+.+.++|+|+++||+++... ...|+.+.++++.+... .|++.+
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~vi~~GDl~~~~~------~~~~~~~~~~~~~l~~~~~~~~~v 74 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDLVVITGDLTQRGL------PEEFEEAREFLDALPAPLEPVLVV 74 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCEEEECCCCCCCCC------HHHHHHHHHHHHHccccCCcEEEe
Confidence 578999998754211 122333449999999999997532 34566677777776544 699999
Q ss_pred CCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCC
Q 017284 232 AGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKT 311 (374)
Q Consensus 232 ~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~ 311 (374)
+||||.
T Consensus 75 ~GNHD~-------------------------------------------------------------------------- 80 (144)
T cd07400 75 PGNHDV-------------------------------------------------------------------------- 80 (144)
T ss_pred CCCCeE--------------------------------------------------------------------------
Confidence 999994
Q ss_pred CeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccccc
Q 017284 312 PWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (374)
Q Consensus 312 ~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 363 (374)
|+++|+|++...... ......++.+.+++.+++++++++||+|.....
T Consensus 81 ---iv~~Hhp~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~l~GH~H~~~~~ 128 (144)
T cd07400 81 ---IVVLHHPLVPPPGSG-RERLLDAGDALKLLAEAGVDLVLHGHKHVPYVG 128 (144)
T ss_pred ---EEEecCCCCCCCccc-cccCCCHHHHHHHHHHcCCCEEEECCCCCcCee
Confidence 888899997654321 111114567899999999999999999996543
No 28
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=99.50 E-value=1.6e-13 Score=123.40 Aligned_cols=169 Identities=15% Similarity=0.011 Sum_probs=100.6
Q ss_pred CcEEEEEecCCCCCCc-----HHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCc
Q 017284 161 PYTFGIIGDLGQTYNS-----LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNH 235 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~-----~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNH 235 (374)
++||++++|+|..... ...++.+.+.+||+|+++||+++.... .. +.+.+.++.+....|++.++|||
T Consensus 1 ~~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~vl~~GD~~~~~~~-----~~--~~~~~~l~~l~~~~~v~~v~GNH 73 (223)
T cd07385 1 GLRIAHLSDLHLGPFVSRERLERLVEKINALKPDLVVLTGDLVDGSVD-----VL--ELLLELLKKLKAPLGVYAVLGNH 73 (223)
T ss_pred CCEEEEEeecCCCccCCHHHHHHHHHHHhccCCCEEEEcCcccCCcch-----hh--HHHHHHHhccCCCCCEEEECCCc
Confidence 4799999999987532 223344445599999999999964332 11 34555666666678999999999
Q ss_pred ccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEE
Q 017284 236 EIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLI 315 (374)
Q Consensus 236 D~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~i 315 (374)
|....... .+........+. -..+.+..++.++..+....-.. ......++.+.+++. .+.+..|
T Consensus 74 D~~~~~~~----~~~~~l~~~~v~-----~L~~~~~~~~~~~~~i~i~G~~~----~~~~~~~~~~~~~~~--~~~~~~I 138 (223)
T cd07385 74 DYYSGDEE----NWIEALESAGIT-----VLRNESVEISVGGATIGIAGVDD----GLGRRPDLEKALKGL--DEDDPNI 138 (223)
T ss_pred ccccCchH----HHHHHHHHcCCE-----EeecCcEEeccCCeEEEEEeccC----ccccCCCHHHHHhCC--CCCCCEE
Confidence 98542110 000011100111 01233455666654444332111 122334666677654 3456789
Q ss_pred EEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccC
Q 017284 316 VLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSF 368 (374)
Q Consensus 316 v~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~ 368 (374)
++.|.|.+.. .+.+.++|++++||+|..+...|...
T Consensus 139 ~l~H~P~~~~-----------------~~~~~~~dl~l~GHtHggqi~~~~~~ 174 (223)
T cd07385 139 LLAHQPDTAE-----------------EAAAWGVDLQLSGHTHGGQIRLPGIG 174 (223)
T ss_pred EEecCCChhH-----------------HhcccCccEEEeccCCCCEEeccccc
Confidence 9999875321 11567899999999999887665443
No 29
>TIGR03768 RPA4764 metallophosphoesterase, RPA4764 family. This model describes a small collection of probable metallophosphoresterases, related to pfam00149. Members of this protein family usually have a Sec-independent TAT (twin-arginine translocation) signal sequence, N-terminal to the region modeled by this alignment. This model and TIGR03767 divide a narrow clade of pfam00149-related enzymes.
Probab=99.50 E-value=4.5e-13 Score=128.32 Aligned_cols=93 Identities=18% Similarity=0.309 Sum_probs=65.3
Q ss_pred CCceEEEe-cCCE--EEEEEeCCCC---------C--CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCC---
Q 017284 267 NPLWYAIR-RASA--HIIVLSSYSP---------Y--VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVH--- 329 (374)
Q Consensus 267 ~~~~ysf~-~g~v--~fi~Ldt~~~---------~--~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~--- 329 (374)
+..||+|+ .|++ ++|+|||... + ....+|++||+++|+.+.. +.+++|+++|+|+.+.....
T Consensus 291 G~~yYsFd~~g~vplrvIvLDSt~~~~~~s~pG~~~G~Ld~eQLaWLe~~La~a~a-~~p~VVV~hHpPi~t~gi~~md~ 369 (492)
T TIGR03768 291 DFACYSFVPKSDVPLKVIVLDDTQSEHDGSHDIHGHGSLDAKRWDWLKAELARGQA-DGQLMIIAAHIPIAVSPIGSEME 369 (492)
T ss_pred CcceeEEecCCCcceEEEEECCCccccccCCCCCcceeeCHHHHHHHHHHHHhCcC-CCceEEEEeCCCcccCCccchhh
Confidence 44699999 5855 9999998641 1 1358999999999998632 56788888888877522211
Q ss_pred CC----------CCHHHHHHHHHHHHHc-CCcEEEEcCcccc
Q 017284 330 YM----------EGESMRAVFESWFVHS-RVDFIFAGHVHAY 360 (374)
Q Consensus 330 ~~----------~~~~~r~~l~~ll~~~-~VdlvlsGH~H~y 360 (374)
+. .+...-.+|..+|.+| +|.++||||.|.-
T Consensus 370 w~~~~~~~~~~L~n~~~~~eLlaLL~~hPnVla~LsGHvHrn 411 (492)
T TIGR03768 370 WWLGAADANPDLQNAVSLTGLVTTLQKYPNLLMWIAGHRHLN 411 (492)
T ss_pred hccccccccccccccccHHHHHHHHhcCCCeEEEEcCCcccc
Confidence 00 0011123788999999 5889999999963
No 30
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=99.42 E-value=3.9e-12 Score=117.87 Aligned_cols=165 Identities=15% Similarity=0.123 Sum_probs=93.9
Q ss_pred CCcEEEEEecCCCCCC-cHH----HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCC
Q 017284 160 APYTFGIIGDLGQTYN-SLS----TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~-~~~----~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GN 234 (374)
.++|++++||+|.... ... .++.+++.+||+|+++||+++.+. ...++.+.+.++.+.+..|+++|+||
T Consensus 48 ~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDlVli~GD~~d~~~------~~~~~~~~~~L~~L~~~~pv~~V~GN 121 (271)
T PRK11340 48 APFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDM------PLNFSAFSDVLSPLAECAPTFACFGN 121 (271)
T ss_pred CCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCEEEEccCcCCCCc------cccHHHHHHHHHHHhhcCCEEEecCC
Confidence 4799999999998632 122 233444459999999999986221 12235566677777767899999999
Q ss_pred cccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCC--EEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCC
Q 017284 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRAS--AHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 235 HD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~--v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
||+...... ...+...+. ..+..-..+....+..++ +.++.+|.... +... ..+.++ +..
T Consensus 122 HD~~~~~~~-----~~~~~~~l~--~~gi~lL~n~~~~i~~~~~~i~i~G~~d~~~---~~~~---~~~~~~-----~~~ 183 (271)
T PRK11340 122 HDRPVGTEK-----NHLIGETLK--SAGITVLFNQATVIATPNRQFELVGTGDLWA---GQCK---PPPASE-----ANL 183 (271)
T ss_pred CCcccCccc-----hHHHHHHHH--hcCcEEeeCCeEEEeeCCcEEEEEEecchhc---cCCC---hhHhcC-----CCC
Confidence 997532110 011111110 000001223444555543 56677753211 1101 111222 134
Q ss_pred eEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccccccc
Q 017284 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVR 365 (374)
Q Consensus 313 w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~ 365 (374)
.+|++.|.|-+- +.+.+.++||+||||+|.-+-..|
T Consensus 184 ~~IlL~H~P~~~-----------------~~~~~~~~dL~lsGHTHGGQi~lP 219 (271)
T PRK11340 184 PRLVLAHNPDSK-----------------EVMRDEPWDLMLCGHTHGGQLRVP 219 (271)
T ss_pred CeEEEEcCCChh-----------------HhhccCCCCEEEeccccCCeEEcc
Confidence 578899999531 123467899999999998654433
No 31
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=99.41 E-value=2.9e-12 Score=104.11 Aligned_cols=117 Identities=22% Similarity=0.223 Sum_probs=83.3
Q ss_pred EEEecCCCCCCcHHHHH---HHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCC
Q 017284 165 GIIGDLGQTYNSLSTLK---HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (374)
Q Consensus 165 ~v~gD~~~~~~~~~~l~---~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~ 241 (374)
+++||+|.......... ...+.++|+||++||+++.... ..+..+...........|++.++||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~~vi~~GD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~GNHD----- 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPDFVLVLGDLVGDGPD------PEEVLAAALALLLLLGIPVYVVPGNHD----- 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCCEEEECCcccCCCCC------chHHHHHHHHHhhcCCCCEEEeCCCce-----
Confidence 36899998865443332 3333499999999999985442 222333223334456789999999999
Q ss_pred CCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEeccc
Q 017284 242 NMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVP 321 (374)
Q Consensus 242 ~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P 321 (374)
|+++|.|
T Consensus 70 -------------------------------------------------------------------------i~~~H~~ 76 (131)
T cd00838 70 -------------------------------------------------------------------------ILLTHGP 76 (131)
T ss_pred -------------------------------------------------------------------------EEEeccC
Confidence 8889999
Q ss_pred ceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccccccc
Q 017284 322 LYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVR 365 (374)
Q Consensus 322 ~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~ 365 (374)
++.............++.+..++.+.+++++|+||.|.+.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GH~H~~~~~~~ 120 (131)
T cd00838 77 PYDPLDELSPDEDPGSEALLELLEKYGVDLVLSGHTHVYERREP 120 (131)
T ss_pred CCCCchhhcccchhhHHHHHHHHHHhCCCEEEeCCeeccccccC
Confidence 97765432222222577888999999999999999999998763
No 32
>cd07389 MPP_PhoD Bacillus subtilis PhoD and related proteins, metallophosphatase domain. PhoD (also known as alkaline phosphatase D/APaseD in Bacillus subtilis) is a secreted phosphodiesterase encoded by phoD of the Pho regulon in Bacillus subtilis. PhoD homologs are found in prokaryotes, eukaryotes, and archaea. PhoD contains a twin arginine (RR) motif and is transported by the Tat (Twin-arginine translocation) translocation pathway machinery (TatAyCy). This family also includes the Fusarium oxysporum Fso1 protein. PhoD belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF
Probab=99.36 E-value=4.1e-12 Score=114.77 Aligned_cols=161 Identities=16% Similarity=0.147 Sum_probs=102.2
Q ss_pred EEEEEecCCCCCCcHHHHHHHH----HhCCCeEEecccccccCCCCc-----------------cc---cchhhHHHH--
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYM----QSGGQSVLFLGDLSYADRYEY-----------------ND---VGIRWDSWG-- 216 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~----~~~~d~vl~~GD~~y~~~~~~-----------------~~---~~~~w~~~~-- 216 (374)
||++.||.+...........+. +.++|++|++||.+|++.... .. +...+..+.
T Consensus 1 r~a~~SC~~~~~~~~~~~~~~~~~~~~~~~d~~l~~GD~IY~d~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~Y~~~~~~ 80 (228)
T cd07389 1 RFAFGSCNKYESGYFNAYRALAYDHSEEDPDLFLHLGDQIYADDVGGLMPALIEGRPLEPAHEALTLEEYRERYRQYRSD 80 (228)
T ss_pred CEEEEECCCCCCCCcHHHHHHhhhccccCCCEEEEcCCeecccCCCcccccccCCcCcCCcccccCHHHHHHHHHHHcCC
Confidence 5889999888766656666665 569999999999999886321 01 111111111
Q ss_pred HHHHHhhhcCCeEEcCCCcccccCCCCCC-------c------ccccccccccccCcCCCC--CCCCceEEEecCCE-EE
Q 017284 217 RFIEQSAAYQPWIWSAGNHEIEFMPNMGE-------V------IPFKSYLHRIATPYTASK--STNPLWYAIRRASA-HI 280 (374)
Q Consensus 217 ~~~~~~~~~~P~~~v~GNHD~~~~~~~~~-------~------~~~~~y~~~f~~p~~~~~--~~~~~~ysf~~g~v-~f 280 (374)
..++.+.+.+|++.+|+|||+..+..... . ....+|...+..+..... .....|++|.+|.. .|
T Consensus 81 p~~~~~~~~~p~~~iwDDHDi~~n~~~~~~~~~~~~~~~~~~~~a~~ay~e~~~~~~~~~~~~~~~~~y~~~~~G~~~~~ 160 (228)
T cd07389 81 PDLQRLLAQVPTIGIWDDHDIGDNWGGDGAWVQDSPVFYARKAAARQAYLEFQPVRNPSPRRGGRGGIYRSFRFGDLVDL 160 (228)
T ss_pred HHHHHHhhcCCEEEeccccccccccccccccccCcchHHHHHHHHHHHHHHHcCCCCCCccCCCCceEEEEEecCCcceE
Confidence 22566778899999999999975432210 0 012234444433332222 34678999999995 99
Q ss_pred EEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCc--EEEEcCcc
Q 017284 281 IVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVD--FIFAGHVH 358 (374)
Q Consensus 281 i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~Vd--lvlsGH~H 358 (374)
++||+...- .++......|+.+..++.+.++. ++|||++|
T Consensus 161 ~~lD~R~~R--------------------------------------d~W~~~~~er~~l~~~~~~~~~~~vv~lSGDvH 202 (228)
T cd07389 161 ILLDTRTYR--------------------------------------DSWDGYPAERERLLDLLAKRKIKNVVFLSGDVH 202 (228)
T ss_pred EEEeccccc--------------------------------------ccccccHHHHHHHHHHHHHhCCCCeEEEecHHH
Confidence 999997642 23334455677777776555443 78899999
Q ss_pred ccc
Q 017284 359 AYE 361 (374)
Q Consensus 359 ~ye 361 (374)
.-+
T Consensus 203 ~~~ 205 (228)
T cd07389 203 LAE 205 (228)
T ss_pred HHH
Confidence 743
No 33
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=99.33 E-value=3.6e-11 Score=110.05 Aligned_cols=200 Identities=20% Similarity=0.260 Sum_probs=108.9
Q ss_pred CCCcEEEEEecCCCCCC-----------------c---HHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHH
Q 017284 159 DAPYTFGIIGDLGQTYN-----------------S---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGR 217 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~-----------------~---~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~ 217 (374)
+++||++.++|+|.+.. . .+.+.++.+. +||+|+++||+++.... +..-..+.+
T Consensus 51 ~g~fKIlqvaDlH~g~g~~~~c~d~~p~~~~~csD~nTt~F~~rvL~sE~PDlVVfTGD~i~g~~t-----~Da~~sl~k 125 (379)
T KOG1432|consen 51 DGTFKILQVADLHFGFGRETRCRDVLPSEEACCSDLNTTNFVSRVLASEKPDLVVFTGDNIFGHST-----QDAATSLMK 125 (379)
T ss_pred CCceEEEEeeccccccCCCccccccCcchhhhhcCccHHHHHHHHHhccCCCEEEEeCCccccccc-----HhHHHHHHH
Confidence 46899999999998643 1 1224444444 99999999999986332 222244566
Q ss_pred HHHHhh-hcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCC--CC-CCCceEEEecCC----------------
Q 017284 218 FIEQSA-AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS--KS-TNPLWYAIRRAS---------------- 277 (374)
Q Consensus 218 ~~~~~~-~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~--~~-~~~~~ysf~~g~---------------- 277 (374)
.++|.. .++||.+++||||-...-..-+ ...+.. .+|..-+ .. .+..+--..+|+
T Consensus 126 AvaP~I~~~IPwA~~lGNHDdes~ltr~q---l~~~i~--~lP~s~~~v~p~dg~~~~~~g~gnyn~~i~~~~ds~~~~~ 200 (379)
T KOG1432|consen 126 AVAPAIDRKIPWAAVLGNHDDESDLTRLQ---LMKFIS--KLPYSLSQVNPPDGHMYIIDGFGNYNLQIEGAIDSELENK 200 (379)
T ss_pred HhhhHhhcCCCeEEEecccccccccCHHH---HHHHHh--cCCCccccCCCcccceeeeecccceEEEeccCCCcccccC
Confidence 677654 6899999999999753210000 000000 0111100 00 000110111111
Q ss_pred --EEEEEEeCCCC---------CC-CChHHHHHHHHHHhhc---cCCCCC-eEEEEecccce--ecCCCC------CCCC
Q 017284 278 --AHIIVLSSYSP---------YV-KYTPQWWWLREELKKV---DREKTP-WLIVLMHVPLY--SSNVVH------YMEG 333 (374)
Q Consensus 278 --v~fi~Ldt~~~---------~~-~~~~Q~~WL~~~L~~~---~~~~~~-w~iv~~H~P~y--~~~~~~------~~~~ 333 (374)
..+++||+..+ |+ ..+.|..||+..-.+- +..-.| --++++|.|+- ..-... ..++
T Consensus 201 sv~~lyfld~~~~~s~~~~~~~Ydwik~sq~~wl~~~~~~~~~~~~~~~P~p~La~~HIP~~E~~~~~~~tp~~g~~~E~ 280 (379)
T KOG1432|consen 201 SVFNLYFLDSSSYTSVPPLLPGYDWIKESQLEWLSDTSKEFKEPNSKYNPQPGLAFFHIPLPEFLELESKTPLIGVFQEG 280 (379)
T ss_pred ceeeEEEEecCCcccccccccCccchhhhhHHHHhhhhhhhhcccCccCCCCceEEEEcccHHHhhccCCCcccceeecc
Confidence 23455666331 11 2468999999887331 111123 45788899983 221110 0111
Q ss_pred ---HHHHHHHHHHHH-HcCCcEEEEcCcccccccccccC
Q 017284 334 ---ESMRAVFESWFV-HSRVDFIFAGHVHAYERSVRMSF 368 (374)
Q Consensus 334 ---~~~r~~l~~ll~-~~~VdlvlsGH~H~yeR~~~~~~ 368 (374)
......+...|. ..+|+.||+||+|...--.+.++
T Consensus 281 ~~~~~~~sg~~~~L~~r~~Vk~vf~GHdHvNDfC~~~k~ 319 (379)
T KOG1432|consen 281 VSASKHNSGFLTTLVNRGNVKGVFCGHDHVNDFCGELKG 319 (379)
T ss_pred ccccccccHHHHHHHhccCcceEEeccccccceecccCC
Confidence 112335566666 77899999999999766555554
No 34
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=99.24 E-value=3.3e-11 Score=99.74 Aligned_cols=117 Identities=18% Similarity=0.156 Sum_probs=73.7
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCC
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPN 242 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~ 242 (374)
||+++||+|.... .+...++|+++++||++.... ...++.+.+.++.+. ..+++.++||||...
T Consensus 1 ~i~~isD~H~~~~------~~~~~~~D~vi~~GD~~~~~~------~~~~~~~~~~l~~~~-~~~~~~v~GNHD~~~--- 64 (135)
T cd07379 1 RFVCISDTHSRHR------TISIPDGDVLIHAGDLTERGT------LEELQKFLDWLKSLP-HPHKIVIAGNHDLTL--- 64 (135)
T ss_pred CEEEEeCCCCCCC------cCcCCCCCEEEECCCCCCCCC------HHHHHHHHHHHHhCC-CCeEEEEECCCCCcC---
Confidence 5899999997654 222348999999999985322 222334444444332 123578999999521
Q ss_pred CCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccc
Q 017284 243 MGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPL 322 (374)
Q Consensus 243 ~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~ 322 (374)
. . . .+.|+++|.|+
T Consensus 65 -------~-------------------------------------------------------~--~--~~~ilv~H~~p 78 (135)
T cd07379 65 -------D-------------------------------------------------------P--E--DTDILVTHGPP 78 (135)
T ss_pred -------C-------------------------------------------------------C--C--CCEEEEECCCC
Confidence 0 1 1 24688889999
Q ss_pred eecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 323 YSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 323 y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
+............-.+.+.+++.+.+++++++||+|...
T Consensus 79 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H~~~ 117 (135)
T cd07379 79 YGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIHEGY 117 (135)
T ss_pred CcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcCCcC
Confidence 765432111111112456667788999999999999974
No 35
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=99.16 E-value=1.4e-10 Score=100.81 Aligned_cols=105 Identities=23% Similarity=0.301 Sum_probs=66.5
Q ss_pred CCCeEEecccccccCCCCccccchhhHHHHHHHHHh---hhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCC
Q 017284 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS---AAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS 263 (374)
Q Consensus 187 ~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~---~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~ 263 (374)
+||+|+++||+++.+.... ..+|.+..+.+.++ ...+|++.++||||+..... .....-.+||.
T Consensus 42 ~PD~Vi~lGDL~D~G~~~~---~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~----~~~~~~v~RF~------ 108 (195)
T cd08166 42 QPDIVIFLGDLMDEGSIAN---DDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE----DPIESKIRRFE------ 108 (195)
T ss_pred CCCEEEEeccccCCCCCCC---HHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC----CcCHHHHHHHH------
Confidence 9999999999997654321 33343333223333 24689999999999863210 00011112221
Q ss_pred CCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHH
Q 017284 264 KSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESW 343 (374)
Q Consensus 264 ~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~l 343 (374)
+. | |++.|.|+..... ..+..+
T Consensus 109 -------------------------------------~~----------F-i~lsH~P~~~~~~----------~~~~~~ 130 (195)
T cd08166 109 -------------------------------------KY----------F-IMLSHVPLLAEGG----------QALKHV 130 (195)
T ss_pred -------------------------------------Hh----------h-eeeeccccccccc----------HHHHHH
Confidence 00 1 8899999875432 156678
Q ss_pred HHHcCCcEEEEcCcccccc
Q 017284 344 FVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 344 l~~~~VdlvlsGH~H~yeR 362 (374)
+.+++++++|+||.|.+..
T Consensus 131 ~~~~~p~~Ifs~H~H~s~~ 149 (195)
T cd08166 131 VTDLDPDLIFSAHRHKSSI 149 (195)
T ss_pred HHhcCceEEEEcCccceee
Confidence 8899999999999999754
No 36
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=99.10 E-value=4.8e-10 Score=102.18 Aligned_cols=178 Identities=15% Similarity=0.144 Sum_probs=90.6
Q ss_pred cEEEEEecCCCCCCcHH----HHHHHHH--hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc-CCeEEcCCC
Q 017284 162 YTFGIIGDLGQTYNSLS----TLKHYMQ--SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY-QPWIWSAGN 234 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~----~l~~~~~--~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~-~P~~~v~GN 234 (374)
+|++++||+|.+..... .++.+.. .++|.|+++||++......... ........+.++.+... +|++.++||
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~~~~d~l~i~GDl~d~~~g~~~~-~~~~~~~~~~l~~l~~~g~~v~~v~GN 79 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEARQADALYILGDLFEAWIGDDDP-SPFAREIAAALKALSDSGVPCYFMHGN 79 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhhccCCEEEEccceeccccccCcC-CHHHHHHHHHHHHHHHcCCeEEEEeCC
Confidence 47899999998754322 2233322 3899999999999532111000 11223445556666544 899999999
Q ss_pred cccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeE
Q 017284 235 HEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWL 314 (374)
Q Consensus 235 HD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~ 314 (374)
||.... ..+.+...... -.....++.++.++++.-... +......++++.+.+.. +|.
T Consensus 80 HD~~~~---------~~~~~~~g~~~------l~~~~~~~~~g~~i~l~HGd~-~~~~d~~y~~~r~~~r~------~~~ 137 (241)
T PRK05340 80 RDFLLG---------KRFAKAAGMTL------LPDPSVIDLYGQRVLLLHGDT-LCTDDKAYQRFRRKVRN------PWL 137 (241)
T ss_pred Cchhhh---------HHHHHhCCCEE------eCCcEEEEECCEEEEEECCcc-cccCCHHHHHHHHHHhC------HHH
Confidence 997421 11111111000 011234566676666553321 11123444444444433 122
Q ss_pred EEEecccceecCC------------CCC-CC---CHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 315 IVLMHVPLYSSNV------------VHY-ME---GESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 315 iv~~H~P~y~~~~------------~~~-~~---~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
..++|.+++.... ... .. .....+.+.+++.+++++++++||+|.-..
T Consensus 138 ~~~~~~~p~~~~~~ia~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~ 201 (241)
T PRK05340 138 QWLFLALPLSIRLRIAAKMRAKSKAANQSKSLEIMDVNPEAVAALMEKHGVDTLIHGHTHRPAI 201 (241)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccccCCCHHHHHHHHHHhCCCEEEECcccCcce
Confidence 2223333321100 000 00 000124577888899999999999998654
No 37
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=99.10 E-value=2.6e-10 Score=96.32 Aligned_cols=130 Identities=20% Similarity=0.249 Sum_probs=74.4
Q ss_pred cEEEEEecCCCCCCcH-HHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccC
Q 017284 162 YTFGIIGDLGQTYNSL-STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFM 240 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~-~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~ 240 (374)
+||+++||+|...... +.++.+ +++|+|+++||++.. .++.+.++.+ |++++.||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~--~~~d~vi~~GDi~~~------------~~~~~~~~~~----~~~~v~GNHD~~~- 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYI--NEPDFVIILGDIFDP------------EEVLELLRDI----PVYVVRGNHDNWA- 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHH--TTESEEEEES-SCSH------------HHHHHHHHHH----EEEEE--CCHSTH-
T ss_pred CEEEEEeCCCCChhHHHHHHHHh--cCCCEEEECCCchhH------------HHHHHHHhcC----CEEEEeCCccccc-
Confidence 5899999999964432 233333 479999999999841 3344444443 8999999999531
Q ss_pred CCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecc
Q 017284 241 PNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHV 320 (374)
Q Consensus 241 ~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~ 320 (374)
+...... .. +.+.+.. .-....|+++|.
T Consensus 62 -----------~~~~~~~---------~~-----------------------------~~~~~~~---~~~~~~i~~~H~ 89 (156)
T PF12850_consen 62 -----------FPNENDE---------EY-----------------------------LLDALRL---TIDGFKILLSHG 89 (156)
T ss_dssp -----------HHSEECT---------CS-----------------------------SHSEEEE---EETTEEEEEESS
T ss_pred -----------chhhhhc---------cc-----------------------------cccceee---eecCCeEEEECC
Confidence 1110000 00 1111110 112467888898
Q ss_pred cceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCcee
Q 017284 321 PLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFHF 372 (374)
Q Consensus 321 P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h~ 372 (374)
+.+.... ..+.+..++...+++++++||.|...... .++.++
T Consensus 90 ~~~~~~~--------~~~~~~~~~~~~~~~~~~~GH~H~~~~~~--~~~~~~ 131 (156)
T PF12850_consen 90 HPYDVQW--------DPAELREILSRENVDLVLHGHTHRPQVFK--IGGIHV 131 (156)
T ss_dssp TSSSSTT--------THHHHHHHHHHTTSSEEEESSSSSEEEEE--ETTEEE
T ss_pred CCccccc--------ChhhhhhhhcccCCCEEEcCCcccceEEE--ECCEEE
Confidence 7665321 12345677789999999999999976654 444444
No 38
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=99.06 E-value=2.7e-09 Score=95.73 Aligned_cols=64 Identities=23% Similarity=0.308 Sum_probs=43.3
Q ss_pred cEEEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccccc
Q 017284 162 YTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEF 239 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~ 239 (374)
+|++++||+|..... .....+.+.+||+|+++||++.. . ....+.+..+ ..|++.+.||||...
T Consensus 1 ~rIa~isDiHg~~~~-~~~~~l~~~~pD~Vl~~GDi~~~--------~---~~~~~~l~~l--~~p~~~V~GNHD~~~ 64 (238)
T cd07397 1 LRIAIVGDVHGQWDL-EDIKALHLLQPDLVLFVGDFGNE--------S---VQLVRAISSL--PLPKAVILGNHDAWY 64 (238)
T ss_pred CEEEEEecCCCCchH-HHHHHHhccCCCEEEECCCCCcC--------h---HHHHHHHHhC--CCCeEEEcCCCcccc
Confidence 589999999975432 22334445599999999999831 1 1223333322 369999999999854
No 39
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=99.05 E-value=1.2e-09 Score=101.20 Aligned_cols=82 Identities=17% Similarity=0.070 Sum_probs=59.6
Q ss_pred CCCCCCCCCCcEEEEEecCCCCCCcH---HHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCe
Q 017284 152 TPPKIHPDAPYTFGIIGDLGQTYNSL---STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPW 228 (374)
Q Consensus 152 T~p~~~~~~~~~f~v~gD~~~~~~~~---~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~ 228 (374)
++.......+++++.++|.|...... +.+.++....||+|+++||++.... ...+..+...++++.+..++
T Consensus 35 ~~~~~~~~~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~DlivltGD~~~~~~------~~~~~~~~~~L~~L~~~~gv 108 (284)
T COG1408 35 TPKLPASLQGLKIVQLSDLHSLPFREEKLALLIAIANELPDLIVLTGDYVDGDR------PPGVAALALFLAKLKAPLGV 108 (284)
T ss_pred cCCCCcccCCeEEEEeehhhhchhhHHHHHHHHHHHhcCCCEEEEEeeeecCCC------CCCHHHHHHHHHhhhccCCE
Confidence 33333334688999999999876542 2233444447899999999997411 23446777888889899999
Q ss_pred EEcCCCccccc
Q 017284 229 IWSAGNHEIEF 239 (374)
Q Consensus 229 ~~v~GNHD~~~ 239 (374)
++++||||+..
T Consensus 109 ~av~GNHd~~~ 119 (284)
T COG1408 109 FAVLGNHDYGV 119 (284)
T ss_pred EEEeccccccc
Confidence 99999999863
No 40
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=99.03 E-value=1.6e-09 Score=88.91 Aligned_cols=50 Identities=18% Similarity=0.100 Sum_probs=33.1
Q ss_pred EEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccc
Q 017284 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSV 364 (374)
Q Consensus 314 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~ 364 (374)
+|+++|+|++....... ....-.+.+.+++.+++++++|+||+|......
T Consensus 58 ~Ilv~H~pp~~~~~~~~-~~~~g~~~l~~~l~~~~~~~vl~GH~H~~~~~~ 107 (129)
T cd07403 58 DILLTHAPPAGIGDGED-FAHRGFEAFLDFIDRFRPKLFIHGHTHLNYGYQ 107 (129)
T ss_pred CEEEECCCCCcCcCccc-ccccCHHHHHHHHHHHCCcEEEEcCcCCCcCcc
Confidence 57888888864332110 011124567788889999999999999865554
No 41
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=99.03 E-value=1e-08 Score=89.63 Aligned_cols=174 Identities=16% Similarity=0.157 Sum_probs=102.7
Q ss_pred CcEEEEEecCCCCCCcHHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHH--HHHhh-hcCCeEEcCCCcc
Q 017284 161 PYTFGIIGDLGQTYNSLSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRF--IEQSA-AYQPWIWSAGNHE 236 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~--~~~~~-~~~P~~~v~GNHD 236 (374)
.+|++.++|.|........+..+.+. ++|+++.+||++|..-.+.. .-.+. ++.+. ..+|+++++||-|
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~lviaGDlt~~~~~~~~-------~~~~~~~~e~l~~~~~~v~avpGNcD 75 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADLLVIAGDLTYFHFGPKE-------VAEELNKLEALKELGIPVLAVPGNCD 75 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCEEEEecceehhhcCchH-------HHHhhhHHHHHHhcCCeEEEEcCCCC
Confidence 67999999999987655555444444 89999999999943322111 11111 34444 5789999999988
Q ss_pred cccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCC--CC----CCChHH-HHHHHHHHhhccCC
Q 017284 237 IEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS--PY----VKYTPQ-WWWLREELKKVDRE 309 (374)
Q Consensus 237 ~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~--~~----~~~~~Q-~~WL~~~L~~~~~~ 309 (374)
-..-. ..... .... .. + -..+.|++.|+.+.-.. .+ ...+++ +.-|++-+.+++
T Consensus 76 ~~~v~--------~~l~~-~~~~-----v~-~--~v~~i~~~~~~G~Ggsn~tp~nt~~e~~E~~I~s~l~~~v~~~~-- 136 (226)
T COG2129 76 PPEVI--------DVLKN-AGVN-----VH-G--RVVEIGGYGFVGFGGSNPTPFNTPREFSEDEIYSKLKSLVKKAD-- 136 (226)
T ss_pred hHHHH--------HHHHh-cccc-----cc-c--ceEEecCcEEEEecccCCCCCCCccccCHHHHHHHHHHHHhccc--
Confidence 53210 00000 0000 00 1 45777888888744311 11 122333 233444444432
Q ss_pred CCCeEEEEecccceecCCCCCCCC--HHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 310 KTPWLIVLMHVPLYSSNVVHYMEG--ESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 310 ~~~w~iv~~H~P~y~~~~~~~~~~--~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
..-+|+++|.|+|.+...- ..+ ..-.+.+.+++++.++-+.+|||+|-+.-
T Consensus 137 -~~~~Il~~HaPP~gt~~d~-~~g~~hvGS~~vr~~ieefqP~l~i~GHIHEs~G 189 (226)
T COG2129 137 -NPVNILLTHAPPYGTLLDT-PSGYVHVGSKAVRKLIEEFQPLLGLHGHIHESRG 189 (226)
T ss_pred -CcceEEEecCCCCCccccC-CCCccccchHHHHHHHHHhCCceEEEeeeccccc
Confidence 1122899999999876541 122 22345777889999999999999998543
No 42
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=99.03 E-value=2.3e-09 Score=93.38 Aligned_cols=178 Identities=17% Similarity=0.186 Sum_probs=84.2
Q ss_pred CcEEEEEecCCCCCCcHHHHH-HHHHhCCCeEEecccccccCCCCccccchhhH--------------------------
Q 017284 161 PYTFGIIGDLGQTYNSLSTLK-HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWD-------------------------- 213 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~~~~~l~-~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~-------------------------- 213 (374)
+-+++.++|.+......+.+. .+.+.++|.|+++||+.-.... ...|.
T Consensus 5 ~~kilA~s~~~g~~e~l~~l~~~~~e~~~D~~v~~G~~~~~~a~-----~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~ 79 (255)
T PF14582_consen 5 VRKILAISNFRGDFELLERLVEVIPEKGPDAVVFVGDLLKAEAR-----SDEYERAQEEQREPDKSEINEEECYDSEALD 79 (255)
T ss_dssp --EEEEEE--TT-HHHHHHHHHHHHHHT-SEEEEES-SS-TCHH-----HHHHHHHHHTT----THHHHHHHHHHHHHHH
T ss_pred chhheeecCcchHHHHHHHHHhhccccCCCEEEEeccccccchh-----hhHHHHHhhhccCcchhhhhhhhhhhHHHHH
Confidence 347899999887544433333 3344499999999999853221 22333
Q ss_pred HHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCC-C---
Q 017284 214 SWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSP-Y--- 289 (374)
Q Consensus 214 ~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~-~--- 289 (374)
.|++.+.. ..+|.+++|||||-....... .+|....-.|.-- .-...+.+.-|...++.+..+-. .
T Consensus 80 ~ff~~L~~--~~~p~~~vPG~~Dap~~~~lr-----~a~~~e~v~p~~~---~vH~sf~~~~g~y~v~G~GGeI~~~~~~ 149 (255)
T PF14582_consen 80 KFFRILGE--LGVPVFVVPGNMDAPERFFLR-----EAYNAEIVTPHIH---NVHESFFFWKGEYLVAGMGGEITDDQRE 149 (255)
T ss_dssp HHHHHHHC--C-SEEEEE--TTS-SHHHHHH-----HHHHCCCC-TTEE---E-CTCEEEETTTEEEEEE-SEEESSS-B
T ss_pred HHHHHHHh--cCCcEEEecCCCCchHHHHHH-----HHhccceecccee---eeeeeecccCCcEEEEecCccccCCCcc
Confidence 33443332 368999999999962100000 1111111111100 00112334445577777765311 0
Q ss_pred ---CC--ChHHHHHHHHHHhhccCCCCCeEEEEecccc-eecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 290 ---VK--YTPQWWWLREELKKVDREKTPWLIVLMHVPL-YSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 290 ---~~--~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~-y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
.. ......|..+.|..+ +..-+|+++|.|+ +..+..|. -.+.+..++++++.++|++||+|--.
T Consensus 150 ~~~~LrYP~weaey~lk~l~el---k~~r~IlLfhtpPd~~kg~~h~-----GS~~V~dlIk~~~P~ivl~Ghihe~~ 219 (255)
T PF14582_consen 150 EEFKLRYPAWEAEYSLKFLREL---KDYRKILLFHTPPDLHKGLIHV-----GSAAVRDLIKTYNPDIVLCGHIHESH 219 (255)
T ss_dssp CSSS-EEEHHHHHHHHGGGGGC---TSSEEEEEESS-BTBCTCTBTT-----SBHHHHHHHHHH--SEEEE-SSS-EE
T ss_pred ccccccchHHHHHHHHHHHHhc---ccccEEEEEecCCccCCCcccc-----cHHHHHHHHHhcCCcEEEecccccch
Confidence 00 112345555666664 2345788899999 44332222 12467789999999999999999743
No 43
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=99.01 E-value=9e-10 Score=94.86 Aligned_cols=49 Identities=31% Similarity=0.511 Sum_probs=32.7
Q ss_pred CCCeEEecccccccCCCCccccchhhHHHHHHHHHhh-------hcCCeEEcCCCcccc
Q 017284 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-------AYQPWIWSAGNHEIE 238 (374)
Q Consensus 187 ~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~-------~~~P~~~v~GNHD~~ 238 (374)
+||+||++||++...... + ...|.+..+.+..+. ..+|++.++||||+.
T Consensus 45 ~pd~vi~lGDl~d~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g 100 (171)
T cd07384 45 KPDVVLFLGDLFDGGRIA--D-SEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIG 100 (171)
T ss_pred CCCEEEEeccccCCcEeC--C-HHHHHHHHHHHHHHhcccccccCCceEEEECCccccC
Confidence 999999999999643321 1 234544433333332 268999999999985
No 44
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=99.00 E-value=3.5e-09 Score=89.81 Aligned_cols=50 Identities=22% Similarity=0.362 Sum_probs=33.1
Q ss_pred hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh---hcCCeEEcCCCcccc
Q 017284 186 SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA---AYQPWIWSAGNHEIE 238 (374)
Q Consensus 186 ~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~---~~~P~~~v~GNHD~~ 238 (374)
.+||+|+++||++...... . ...|..+...+.... ...|++.++||||..
T Consensus 37 ~~pd~vv~~GDl~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~ 89 (156)
T cd08165 37 LQPDVVFVLGDLFDEGKWS--T-DEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIG 89 (156)
T ss_pred cCCCEEEECCCCCCCCccC--C-HHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcC
Confidence 3999999999999643321 1 234544433333332 247999999999974
No 45
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=98.91 E-value=2.5e-09 Score=92.80 Aligned_cols=56 Identities=21% Similarity=0.320 Sum_probs=34.3
Q ss_pred HHHHHHh-CCCeEEecccccccCCCCccccchhhHH-HHHHHHHhh-------------------hcCCeEEcCCCcccc
Q 017284 180 LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQSA-------------------AYQPWIWSAGNHEIE 238 (374)
Q Consensus 180 l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~-~~~~~~~~~-------------------~~~P~~~v~GNHD~~ 238 (374)
+..+... +||.|+++||+... +.- . +.+|.+ +.|+.+-+. ..+|++.++||||+.
T Consensus 36 ~~~~~~~l~Pd~V~fLGDLfd~-~w~-~--D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~V~GNHDIG 111 (193)
T cd08164 36 VSMMQFWLKPDAVVVLGDLFSS-QWI-D--DEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLINIAGNHDVG 111 (193)
T ss_pred HHHHHHhcCCCEEEEeccccCC-Ccc-c--HHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEEECCcccCC
Confidence 3444444 99999999999954 221 1 334432 223322221 148999999999986
Q ss_pred c
Q 017284 239 F 239 (374)
Q Consensus 239 ~ 239 (374)
.
T Consensus 112 ~ 112 (193)
T cd08164 112 Y 112 (193)
T ss_pred C
Confidence 4
No 46
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=98.85 E-value=3.8e-08 Score=90.24 Aligned_cols=184 Identities=14% Similarity=0.077 Sum_probs=92.3
Q ss_pred cEEEEEecCCCCC------CcHH----HHHHHHHhCCC-eEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEE
Q 017284 162 YTFGIIGDLGQTY------NSLS----TLKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIW 230 (374)
Q Consensus 162 ~~f~v~gD~~~~~------~~~~----~l~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~ 230 (374)
++|++++|+|... .... .++++.+.++| +++.+||++....... ........+.+.. --.-+.
T Consensus 1 l~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~---~~~~~~~~~~l~~---~g~d~~ 74 (252)
T cd00845 1 LTILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPST---ATKGEANIELMNA---LGYDAV 74 (252)
T ss_pred CEEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchh---ccCCcHHHHHHHh---cCCCEE
Confidence 5899999999553 2232 34445555788 7799999986433211 0011222222322 224567
Q ss_pred cCCCcccccCCCCCCcccccccccccccCc-------CC---CCCCCCceEEEecCCE--EEEEEeCCCCCC--------
Q 017284 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPY-------TA---SKSTNPLWYAIRRASA--HIIVLSSYSPYV-------- 290 (374)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~-------~~---~~~~~~~~ysf~~g~v--~fi~Ldt~~~~~-------- 290 (374)
++||||+..... .+.........|. .+ .......|.-++.+++ -|+.+.+.....
T Consensus 75 ~~GNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~~~i~~~~g~kIgiiG~~~~~~~~~~~~~~~~ 149 (252)
T cd00845 75 TIGNHEFDYGLD-----ALAELYKDANFPVLSANLYDKDTGTGPPWAKPYKIIEVDGVKIGVIGLTTPDTPTYTPLGWII 149 (252)
T ss_pred eeccccccccHH-----HHHHHHHhCCCCEEEEeeeccCCCCCCCCcCCeEEEEECCEEEEEEEeccccceeecCCCccc
Confidence 889999864321 1111111111110 00 0011234556777874 555554422100
Q ss_pred --CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccC
Q 017284 291 --KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSF 368 (374)
Q Consensus 291 --~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~ 368 (374)
......+.+++..+. .+.+...+|++.|.+... ...+...+ .++|+||+||.|.........+
T Consensus 150 ~~~~~~~~~~~~~~~~~-~~~~~D~vIvl~H~g~~~------------~~~la~~~--~giDlvlggH~H~~~~~~~~~~ 214 (252)
T cd00845 150 GLPFEDLAEAVAVAEEL-LAEGADVIILLSHLGLDD------------DEELAEEV--PGIDVILGGHTHHLLEEPEVVN 214 (252)
T ss_pred CceecCHHHHHHHHHHH-HhCCCCEEEEEeccCccc------------hHHHHhcC--CCccEEEcCCcCcccCCCcccC
Confidence 011223334332222 225678899999977532 01111111 5899999999999765433445
Q ss_pred Cce
Q 017284 369 PFH 371 (374)
Q Consensus 369 ~~h 371 (374)
++.
T Consensus 215 ~~~ 217 (252)
T cd00845 215 GTL 217 (252)
T ss_pred CEE
Confidence 544
No 47
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.85 E-value=3.8e-08 Score=83.68 Aligned_cols=61 Identities=16% Similarity=0.073 Sum_probs=41.5
Q ss_pred cEEEEEecCCCCCCcHHHH-HHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 162 YTFGIIGDLGQTYNSLSTL-KHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l-~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+|++++||+|......+.+ +.+... ++|.|+++||++. ....+.++.+ ..|++.|.||||.
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d~ii~~GD~~~-------------~~~~~~l~~~--~~~~~~V~GN~D~ 63 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVDLVIHAGDLTS-------------PFVLKEFEDL--AAKVIAVRGNNDG 63 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCCEEEEcCCCCC-------------HHHHHHHHHh--CCceEEEccCCCc
Confidence 4899999999765443333 334444 8999999999981 1222333322 3589999999995
No 48
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=98.81 E-value=4.6e-08 Score=81.85 Aligned_cols=158 Identities=22% Similarity=0.200 Sum_probs=85.0
Q ss_pred CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCC
Q 017284 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKST 266 (374)
Q Consensus 187 ~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~ 266 (374)
.-|.|++.||++.+...+++. .=++++..+-. + -+.+.||||+.... . +..++. +|.. .
T Consensus 43 ~eDiVllpGDiSWaM~l~ea~------~Dl~~i~~LPG-~-K~m~rGNHDYWw~s-~------skl~n~--lp~~----l 101 (230)
T COG1768 43 PEDIVLLPGDISWAMRLEEAE------EDLRFIGDLPG-T-KYMIRGNHDYWWSS-I------SKLNNA--LPPI----L 101 (230)
T ss_pred hhhEEEecccchhheechhhh------hhhhhhhcCCC-c-EEEEecCCccccch-H------HHHHhh--cCch----H
Confidence 458999999999876653221 11344444322 2 36699999996431 1 111110 1100 0
Q ss_pred CCceEEEecCCEEEEEEe---CC-CCCCCChHH--------HHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCH
Q 017284 267 NPLWYAIRRASAHIIVLS---SY-SPYVKYTPQ--------WWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGE 334 (374)
Q Consensus 267 ~~~~ysf~~g~v~fi~Ld---t~-~~~~~~~~Q--------~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~ 334 (374)
--..-.|.+++.-++..- +. .++....+| ..-|+..+.++-++...-.||+.|.|+++..... +
T Consensus 102 ~~~n~~f~l~n~aI~G~RgW~s~~~~~e~~te~Deki~~RE~~RLrlsa~a~l~k~~~~fivM~HYPP~s~~~t~---~- 177 (230)
T COG1768 102 FYLNNGFELLNYAIVGVRGWDSPSFDSEPLTEQDEKIFLREIGRLRLSADAALPKGVSKFIVMTHYPPFSDDGTP---G- 177 (230)
T ss_pred hhhccceeEeeEEEEEeecccCCCCCcCccchhHHHHHHHHHHHHHHHHHHhcccCcCeEEEEEecCCCCCCCCC---c-
Confidence 000012455554444432 21 122223333 3334442223223455668999999998765432 1
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCcccccc---cccccCCceec
Q 017284 335 SMRAVFESWFVHSRVDFIFAGHVHAYER---SVRMSFPFHFF 373 (374)
Q Consensus 335 ~~r~~l~~ll~~~~VdlvlsGH~H~yeR---~~~~~~~~h~~ 373 (374)
.+.+++++++|+.++.||.|--.| ....-.|+++.
T Consensus 178 ----~~sevlee~rv~~~lyGHlHgv~~p~~~~s~v~Gi~y~ 215 (230)
T COG1768 178 ----PFSEVLEEGRVSKCLYGHLHGVPRPNIGFSNVRGIEYM 215 (230)
T ss_pred ----chHHHHhhcceeeEEeeeccCCCCCCCCcccccCceEE
Confidence 456788899999999999999775 23333355553
No 49
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=98.80 E-value=9.7e-08 Score=86.44 Aligned_cols=73 Identities=21% Similarity=0.128 Sum_probs=45.9
Q ss_pred EEEecCCCCCCcH----HHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cCCeEEcCCCccc
Q 017284 165 GIIGDLGQTYNSL----STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEI 237 (374)
Q Consensus 165 ~v~gD~~~~~~~~----~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~P~~~v~GNHD~ 237 (374)
+++||+|.+.... ..++.+.+. +||+|+++||++......... ....+.+.+.++.+.. ..|++.++||||.
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~~~d~lii~GDi~d~~~~~~~~-~~~~~~~~~~l~~L~~~~~~v~~v~GNHD~ 80 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEARKADALYILGDLFEAWIGDDDP-STLARSVAQAIRQVSDQGVPCYFMHGNRDF 80 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhccCCEEEEcCceeccccCCCCC-CHHHHHHHHHHHHHHHCCCeEEEEcCCCch
Confidence 5789999875422 234444443 799999999999631110000 1122344555666654 4899999999997
Q ss_pred c
Q 017284 238 E 238 (374)
Q Consensus 238 ~ 238 (374)
.
T Consensus 81 ~ 81 (231)
T TIGR01854 81 L 81 (231)
T ss_pred h
Confidence 4
No 50
>KOG3770 consensus Acid sphingomyelinase and PHM5 phosphate metabolism protein [Lipid transport and metabolism]
Probab=98.74 E-value=1.1e-07 Score=93.65 Aligned_cols=177 Identities=18% Similarity=0.204 Sum_probs=100.5
Q ss_pred HHHHHHHHh--CCCeEEecccccccCCCCccccchhh---HHHHHHHHHhhhcCCeEEcCCCcccccCCCCC--C--cc-
Q 017284 178 STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRW---DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMG--E--VI- 247 (374)
Q Consensus 178 ~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w---~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~--~--~~- 247 (374)
.+|.+|.++ ++|||+++||++-.+...... +... ....+.+......+|++++.||||......+. . ..
T Consensus 199 s~L~~ike~~~~iD~I~wTGD~~~H~~w~~t~-~~~l~~~~~l~~~~~e~FpdvpvypalGNhe~~P~N~F~~~~~~~~~ 277 (577)
T KOG3770|consen 199 SALDHIKENHKDIDYIIWTGDNVAHDVWAQTE-EENLSMLSRLTSLLSEYFPDVPVYPALGNHEIHPVNLFAPGSVPKRH 277 (577)
T ss_pred HHHHHHHhcCCCCCEEEEeCCCCcccchhhhH-HHHHHHHHHHHHHHHHhCCCCceeeecccCCCCcHhhcCCCCCcchh
Confidence 456677776 599999999999654322111 1111 12233345556689999999999985321110 0 00
Q ss_pred ----cccccccccc--cCcCCC-CCCCCceEEE-ecCCEEEEEEeCCCCC----------CCChHHHHHHHHHHhhccCC
Q 017284 248 ----PFKSYLHRIA--TPYTAS-KSTNPLWYAI-RRASAHIIVLSSYSPY----------VKYTPQWWWLREELKKVDRE 309 (374)
Q Consensus 248 ----~~~~y~~~f~--~p~~~~-~~~~~~~ysf-~~g~v~fi~Ldt~~~~----------~~~~~Q~~WL~~~L~~~~~~ 309 (374)
.|..+...|. +|.... ....+.+|.- ..++.++|+||+..-+ .....|++|+..+|.+++.
T Consensus 278 ~~~wly~~~~~~W~~wlp~e~~~t~~kga~Y~~~~~~Glr~IslNt~~c~~~N~~L~~n~tdp~~~lqWf~~~L~~ae~- 356 (577)
T KOG3770|consen 278 SQLWLYKHLAGAWSTWLPAEAKETFLKGAYYLVLVIDGLRLISLNTNYCSAPNFWLYANQTDPIDQLQWFVDQLQEAES- 356 (577)
T ss_pred hhhHHHHHHHhhhhccCCHHHHhhhhcCcEEEEeecCCceEEEeccccccccceeeeecCCCchHHhhHHHHHHHHHHh-
Confidence 0011111121 232211 1233455554 4578999999995421 1246789999999998753
Q ss_pred CCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcC--CcEEEEcCccccc
Q 017284 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSR--VDFIFAGHVHAYE 361 (374)
Q Consensus 310 ~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~--VdlvlsGH~H~ye 361 (374)
+..-+=++.|.|+-.. ... +.-...+-.++.++. +...|.||.|.-+
T Consensus 357 ~GekVhil~HIPpG~~---~c~--~~ws~~f~~iv~r~~~tI~gqf~GH~h~d~ 405 (577)
T KOG3770|consen 357 AGEKVHILGHIPPGDG---VCL--EGWSINFYRIVNRFRSTIAGQFYGHTHIDE 405 (577)
T ss_pred cCCEEEEEEeeCCCCc---chh--hhhhHHHHHHHHHHHHhhhhhccccCccee
Confidence 3444667789997431 111 122234445555553 3456999999855
No 51
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=98.68 E-value=4.1e-08 Score=83.09 Aligned_cols=56 Identities=20% Similarity=0.283 Sum_probs=39.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
|++++||+|... ..+.++.+. ++|.|+++||++..... . . +....|++.+.||||.
T Consensus 1 ~i~~isD~H~~~---~~~~~~~~~~~~~d~ii~~GD~~~~~~~-----~----~-------~~~~~~~~~V~GNhD~ 58 (155)
T cd00841 1 KIGVISDTHGSL---ELLEKALELFGDVDLIIHAGDVLYPGPL-----N----E-------LELKAPVIAVRGNCDG 58 (155)
T ss_pred CEEEEecCCCCH---HHHHHHHHHhcCCCEEEECCcccccccc-----c----h-------hhcCCcEEEEeCCCCC
Confidence 589999999764 333433333 49999999999864321 1 1 2345689999999996
No 52
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=98.63 E-value=7.8e-07 Score=81.62 Aligned_cols=186 Identities=17% Similarity=0.130 Sum_probs=98.6
Q ss_pred EEEEecCCCCCCc-HHHHHHHHHh---CCCeEEecccccccCCCCccc---c---chhhHHHHHHHHHhh-hcCCeEEcC
Q 017284 164 FGIIGDLGQTYNS-LSTLKHYMQS---GGQSVLFLGDLSYADRYEYND---V---GIRWDSWGRFIEQSA-AYQPWIWSA 232 (374)
Q Consensus 164 f~v~gD~~~~~~~-~~~l~~~~~~---~~d~vl~~GD~~y~~~~~~~~---~---~~~w~~~~~~~~~~~-~~~P~~~v~ 232 (374)
|+|.||+|..... ...+..+.+. ++|++|++||+.........+ . ...+..|.+.++... ..+|++.+.
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g~~~~p~~t~fi~ 80 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVDLLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSGEKKAPILTIFIG 80 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCcEEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcCCccCCeeEEEEC
Confidence 5789999985322 1223344332 799999999996322111000 0 012333444443322 457789999
Q ss_pred CCcccccCCCCCCcccccccccccccCcCCCCCCCCce-----EEEecCCEEEEEEeCCC---CCC--------CChHHH
Q 017284 233 GNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLW-----YAIRRASAHIIVLSSYS---PYV--------KYTPQW 296 (374)
Q Consensus 233 GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~-----ysf~~g~v~fi~Ldt~~---~~~--------~~~~Q~ 296 (374)
||||... .+.+ ++..+ ....+.+ ..+++++++|..|.... ++. ....++
T Consensus 81 GNHE~~~-----------~l~~---l~~gg-~v~~Ni~~Lg~~~v~~~~GlrIaGLsG~~~~~~~~~~~~~~~~~t~~~~ 145 (262)
T cd00844 81 GNHEASN-----------YLWE---LPYGG-WVAPNIYYLGYAGVVNFGGLRIAGLSGIYKSHDYRKGHFERPPYSEDTK 145 (262)
T ss_pred CCCCCHH-----------HHHh---hcCCC-eecCcEEEecCCCEEEECCeEEEEecccccccccccccccCCCCCHHHH
Confidence 9999521 0110 11100 0012222 24567889999987622 111 112333
Q ss_pred HHHH-------HHHhhccCCCCCeEEEEecccceecCCCCCCC---------------CHHHHHHHHHHHHHcCCcEEEE
Q 017284 297 WWLR-------EELKKVDREKTPWLIVLMHVPLYSSNVVHYME---------------GESMRAVFESWFVHSRVDFIFA 354 (374)
Q Consensus 297 ~WL~-------~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~---------------~~~~r~~l~~ll~~~~Vdlvls 354 (374)
..+. ..|... +.+-=|++.|.|+.......... +..-...+..++++.+...+|+
T Consensus 146 rs~y~~r~~~~~kl~~~---~~~vDIlLSHdWP~gI~~~~~~~~l~~~~~~~~~~~~~~~~Gs~~~~~ll~~lkPryhf~ 222 (262)
T cd00844 146 RSAYHVRNIEVFKLKQL---KQPIDIFLSHDWPRGIYKHGDKKQLLRKKPFFRQDIESGTLGSPAAEELLKHLKPRYWFS 222 (262)
T ss_pred HHhhhhhHHHHHHHHhc---CCCCcEEEeCCCCcchhhccchHHhhhcCccchhcccccCCCCHHHHHHHHHhCCCEEEE
Confidence 3211 112221 11224888999997653321100 0011246778999999999999
Q ss_pred cCccc-cccccccc
Q 017284 355 GHVHA-YERSVRMS 367 (374)
Q Consensus 355 GH~H~-yeR~~~~~ 367 (374)
||.|. |++..|-.
T Consensus 223 gH~H~~f~~~~~~~ 236 (262)
T cd00844 223 AHLHVKFAALVPHE 236 (262)
T ss_pred ecCCcccceecCCc
Confidence 99999 78775543
No 53
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=98.62 E-value=1.2e-06 Score=81.49 Aligned_cols=186 Identities=15% Similarity=0.083 Sum_probs=89.7
Q ss_pred cEEEEEecCCCCC-------------CcHH----HHHHHHHhCCCeEEe-cccccccCCCCccc---cchhhHHHHHHHH
Q 017284 162 YTFGIIGDLGQTY-------------NSLS----TLKHYMQSGGQSVLF-LGDLSYADRYEYND---VGIRWDSWGRFIE 220 (374)
Q Consensus 162 ~~f~v~gD~~~~~-------------~~~~----~l~~~~~~~~d~vl~-~GD~~y~~~~~~~~---~~~~w~~~~~~~~ 220 (374)
++|++++|+|... .... .++++.+.+++.+++ +||++......... .........+.++
T Consensus 1 l~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln 80 (277)
T cd07410 1 LRILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMN 80 (277)
T ss_pred CeEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHH
Confidence 4788888887642 1122 233444447887776 99998643210000 0000112233333
Q ss_pred HhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCcC-------C-CCCCCCceEEEecC-CEE--EEEEeCCCC-
Q 017284 221 QSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT-------A-SKSTNPLWYAIRRA-SAH--IIVLSSYSP- 288 (374)
Q Consensus 221 ~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~-------~-~~~~~~~~ysf~~g-~v~--fi~Ldt~~~- 288 (374)
.+ . +-+.++||||+..... .+.........|.- . .......|.-++.+ +++ ||.+-+...
T Consensus 81 ~~--g-~d~~~lGNHe~d~g~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~~~~i~~~~~g~kVgviG~~~~~~~ 152 (277)
T cd07410 81 AL--G-YDAGTLGNHEFNYGLD-----YLDKVIKQANFPVLSANVIDADTGEPFLKPYVILERDVGVKVGIIGLTTPQIP 152 (277)
T ss_pred hc--C-CCEEeecccCcccCHH-----HHHHHHHhCCCCEEEEEEEeCCCCCcccCCEEEEEecCCCEEEEEecCCcccc
Confidence 32 2 3366789999864321 11111111111110 0 00112346667888 754 555444210
Q ss_pred -C-----------CCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEc
Q 017284 289 -Y-----------VKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAG 355 (374)
Q Consensus 289 -~-----------~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsG 355 (374)
+ ....+..++..++|++ .++..+|+++|.+........ ...+. ....+.++ .+||++|+|
T Consensus 153 ~~~~~~~~~~~~~~d~~~~~~~~v~~lr~---~~~D~IIvl~H~g~~~~~~~~-~~~~~---~~~~la~~~~~vD~IlgG 225 (277)
T cd07410 153 NWEKPNLIGGLKFTDPVETAKKYVPKLRA---EGADVVVVLAHGGFERDLEES-LTGEN---AAYELAEEVPGIDAILTG 225 (277)
T ss_pred cccCcccCCCcEEcCHHHHHHHHHHHHHH---cCCCEEEEEecCCcCCCcccc-cCCcc---HHHHHHhcCCCCcEEEeC
Confidence 0 0011234444555544 467889999998765432100 11111 12233344 589999999
Q ss_pred Ccccccc
Q 017284 356 HVHAYER 362 (374)
Q Consensus 356 H~H~yeR 362 (374)
|.|....
T Consensus 226 HsH~~~~ 232 (277)
T cd07410 226 HQHRRFP 232 (277)
T ss_pred CCccccc
Confidence 9998543
No 54
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=98.62 E-value=7.4e-07 Score=82.01 Aligned_cols=174 Identities=18% Similarity=0.200 Sum_probs=87.7
Q ss_pred cEEEEEecCCCCC-------CcHHH----HHHHHHhCCC-eEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeE
Q 017284 162 YTFGIIGDLGQTY-------NSLST----LKHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWI 229 (374)
Q Consensus 162 ~~f~v~gD~~~~~-------~~~~~----l~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~ 229 (374)
++++++.|.|.-. ..... ++++.+.+++ ++|.+||++...... . ..+.....+.++.+ . .-+
T Consensus 1 ~~il~~nd~~~~~~~~~~~~gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~--~-~~~g~~~~~~l~~l--~-~d~ 74 (257)
T cd07406 1 FTILHFNDVYEIAPLDGGPVGGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLS--T-ATKGKQMVPVLNAL--G-VDL 74 (257)
T ss_pred CeEEEEccceeecccCCCCcCCHHHHHHHHHHHHhcCCCEEEEECCCccCCccch--h-hcCCccHHHHHHhc--C-CcE
Confidence 4778888887311 11223 3344444677 899999998533211 0 01112223333322 1 236
Q ss_pred EcCCCcccccCCCCCCcccccccccccccCcC-------C---CCCCCCceEEEecCC--EEEEEEeCCCCC--------
Q 017284 230 WSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT-------A---SKSTNPLWYAIRRAS--AHIIVLSSYSPY-------- 289 (374)
Q Consensus 230 ~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~-------~---~~~~~~~~ysf~~g~--v~fi~Ldt~~~~-------- 289 (374)
.++||||+..+.. .+.........|.- . ....-..|.-++.++ +-||.+.+....
T Consensus 75 ~~~GNHefd~g~~-----~l~~~~~~~~~~~L~aNi~~~~~~~~~~~~~~~~i~~~~g~kIgviG~~~~~~~~~~~~~~~ 149 (257)
T cd07406 75 ACFGNHEFDFGED-----QLQKRLGESKFPWLSSNVFDATGGGPLPNGKESAIIERAGVKIGLLGLVEEEWLETLTIDPE 149 (257)
T ss_pred EeecccccccCHH-----HHHHHHhhCCCCEEEEEEEECCCCcccCCCCCeEEEEECCeEEEEEEEecccccccccCCCC
Confidence 6899999864321 01111111111110 0 001124677888888 456666553211
Q ss_pred C-CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCccccc
Q 017284 290 V-KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (374)
Q Consensus 290 ~-~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 361 (374)
+ ....-.+.+++.+++..+.++.-+|++.|.+... .. .+.++ .++|++|+||.|...
T Consensus 150 ~~~~~d~~~~~~~~v~~~~~~~~D~iVvl~H~g~~~--------d~-------~la~~~~~iD~IlgGH~H~~~ 208 (257)
T cd07406 150 YVRYRDYVETARELVDELREQGADLIIALTHMRLPN--------DK-------RLAREVPEIDLILGGHDHEYI 208 (257)
T ss_pred cceEcCHHHHHHHHHHHHHhCCCCEEEEEeccCchh--------hH-------HHHHhCCCCceEEecccceeE
Confidence 0 0122233444444333335788899999986421 11 22223 479999999999865
No 55
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=98.57 E-value=1.2e-06 Score=85.15 Aligned_cols=43 Identities=19% Similarity=0.193 Sum_probs=30.5
Q ss_pred CCcEEEEEecCCCCCC---------cHHHHHH----HHHhCCCeEEecccccccCC
Q 017284 160 APYTFGIIGDLGQTYN---------SLSTLKH----YMQSGGQSVLFLGDLSYADR 202 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~---------~~~~l~~----~~~~~~d~vl~~GD~~y~~~ 202 (374)
..+||++++|+|.+.. ...++.+ +.+.++|+||++||+.....
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~VLiaGDLFd~~~ 57 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDMILLGGDLFHENK 57 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCEEEECCccCCCCC
Confidence 3689999999998632 1223333 33449999999999996543
No 56
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.54 E-value=2.3e-06 Score=74.13 Aligned_cols=60 Identities=18% Similarity=0.165 Sum_probs=38.8
Q ss_pred EEEEEecCCCCCCcH---HHHHHHHH-hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 163 TFGIIGDLGQTYNSL---STLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~---~~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+++++||+|.+.... ..+.++.+ .++|.|+|+||++.. ...+.++.+ ..|++.|.||||.
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~~~~d~iih~GDi~~~-------------~~~~~l~~~--~~~~~~V~GN~D~ 64 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVPGKIQHVLCTGNLCSK-------------ETYDYLKTI--APDVHIVRGDFDE 64 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhccCCCCEEEECCCCCCH-------------HHHHHHHhh--CCceEEEECCCCc
Confidence 478999999554322 22333444 379999999999841 112233332 2379999999995
No 57
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=98.54 E-value=2.8e-07 Score=82.37 Aligned_cols=184 Identities=12% Similarity=0.027 Sum_probs=87.7
Q ss_pred EEEecCCCCCCcH---HHHHHHHH----hCCCeEEecccccccCCCCccccchhhHH-HHHHHHHhhhcCCeEEcCCCcc
Q 017284 165 GIIGDLGQTYNSL---STLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDS-WGRFIEQSAAYQPWIWSAGNHE 236 (374)
Q Consensus 165 ~v~gD~~~~~~~~---~~l~~~~~----~~~d~vl~~GD~~y~~~~~~~~~~~~w~~-~~~~~~~~~~~~P~~~v~GNHD 236 (374)
+++||+|.+.... .......+ .++|.++++||++................ +...++......+++.++||||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~v~GNHD 80 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEADALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLADRGTRVYYVPGNHD 80 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCCEEEEeccEEEEEecCCCCCChHHHHHHHHHHHHHHCCCeEEEECCCch
Confidence 3689999875432 22233322 38999999999995322111110111112 2344444556789999999999
Q ss_pred cccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCCCCCCChHHHHHHHHHHhhcc------CCC
Q 017284 237 IEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYSPYVKYTPQWWWLREELKKVD------REK 310 (374)
Q Consensus 237 ~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~------~~~ 310 (374)
..... .+........ .......+.+++.+++++-... +........|+...+.... ..-
T Consensus 81 ~~~~~---------~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~HG~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (217)
T cd07398 81 FLLGD---------FFAEELGLIL-----LPDPLVHLELDGKRILLEHGDQ-FDTDDRAYQLLRRLGRNPYDQLLFLNRP 145 (217)
T ss_pred HHHHh---------HHHHHcCCEE-----eccceEEEeeCCeEEEEECCCc-CchhHHHHHHHHHHhCcHHHHHHHhcch
Confidence 85321 0100000000 0111114667777777775533 2233344445544322100 000
Q ss_pred CCeEEEEecccceec----CCCC--CCCCHHHHHHHHHHHHHcCCcEEEEcCccccccc
Q 017284 311 TPWLIVLMHVPLYSS----NVVH--YMEGESMRAVFESWFVHSRVDFIFAGHVHAYERS 363 (374)
Q Consensus 311 ~~w~iv~~H~P~y~~----~~~~--~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~ 363 (374)
..|..-........+ .... ........+.+..++.+++++++++||+|.....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~GH~H~~~~~ 204 (217)
T cd07398 146 LNRRRGIAGGLRWSSRYLKKKVKKAVAIIDVFEEAVARLARRKGVDGVICGHTHRPALH 204 (217)
T ss_pred HHHHHHHHHhhhhhhHHHHhCccchHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCCeE
Confidence 000000000000000 0000 0011223456667788899999999999986543
No 58
>PHA02546 47 endonuclease subunit; Provisional
Probab=98.51 E-value=2.2e-06 Score=82.08 Aligned_cols=74 Identities=18% Similarity=0.087 Sum_probs=45.9
Q ss_pred cEEEEEecCCCCCCc---------HHHHHH----HHHhCCCeEEecccccccCCCCccccchhhHHHHH-HHHHhh-hcC
Q 017284 162 YTFGIIGDLGQTYNS---------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGR-FIEQSA-AYQ 226 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~---------~~~l~~----~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~-~~~~~~-~~~ 226 (374)
+||+++||+|.+... ...+.+ +.+.++|+||++||+........ ........+ +++.+. ..+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~VliaGDlfD~~~~~~---~~~~~~~~~~l~~~L~~~gi 77 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITTWIQLGDTFDVRKAIT---QNTMNFVREKIFDLLKEAGI 77 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCEEEECCcccCCCCCCC---HHHHHHHHHHHHHHHHHCCC
Confidence 589999999987321 123333 33459999999999985432211 111111222 233343 368
Q ss_pred CeEEcCCCcccc
Q 017284 227 PWIWSAGNHEIE 238 (374)
Q Consensus 227 P~~~v~GNHD~~ 238 (374)
|++.++||||..
T Consensus 78 ~v~~I~GNHD~~ 89 (340)
T PHA02546 78 TLHVLVGNHDMY 89 (340)
T ss_pred eEEEEccCCCcc
Confidence 999999999974
No 59
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=98.50 E-value=1.6e-06 Score=79.71 Aligned_cols=190 Identities=11% Similarity=0.081 Sum_probs=90.4
Q ss_pred cEEEEEecCCCCCC-------cHHHHH----HHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEE
Q 017284 162 YTFGIIGDLGQTYN-------SLSTLK----HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIW 230 (374)
Q Consensus 162 ~~f~v~gD~~~~~~-------~~~~l~----~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~ 230 (374)
++++.++|+|.... ....+. ++.+.+.++++.+||++..... .. ........+.+..+ .+-+ .
T Consensus 1 i~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~~~~l~l~~GD~~~gs~~--~~-~~~g~~~~~~ln~~--g~d~-~ 74 (257)
T cd07408 1 ITILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKLDNDLLVDAGDAIQGLPI--SD-LDKGETIIKIMNAV--GYDA-V 74 (257)
T ss_pred CEEEEeccCcccccCCCCccccHHHHHHHHHHHHhcCCEEEEeCCCcCCCchh--hh-hcCCcHHHHHHHhc--CCcE-E
Confidence 47899999986421 233333 3322256899999999853221 00 01111222223221 2334 5
Q ss_pred cCCCcccccCCCCCCcccccccccccccCcCCC-------CC-CCCceEEEecC-C--EEEEEEeCCCC-C----C----
Q 017284 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTAS-------KS-TNPLWYAIRRA-S--AHIIVLSSYSP-Y----V---- 290 (374)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~-------~~-~~~~~ysf~~g-~--v~fi~Ldt~~~-~----~---- 290 (374)
++||||+++... .+....+.+..|.-.. +. .-..|.-++.+ + +-||.+-+... . .
T Consensus 75 ~~GNHefd~G~~-----~l~~~~~~~~~~~l~aNv~~~~~~~~~~~py~i~~~~~G~kIgviG~~~~~~~~~~~~~~~~~ 149 (257)
T cd07408 75 TPGNHEFDYGLD-----RLKELSKEADFPFLSANVYDNDTGKRVFKPYKIKELGNGVKVGVIGLTTPETATKTHPKNVKD 149 (257)
T ss_pred ccccccccCCHH-----HHHHHHhhCCCCEEEEEEEEcCCCCcccCCEEEEEcCCCCEEEEEeecCcCcccccCccccCC
Confidence 789999864321 1111222222222100 00 11234555677 6 56676665321 0 0
Q ss_pred C-ChHHHHHHHHH-HhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccc-ccc
Q 017284 291 K-YTPQWWWLREE-LKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSV-RMS 367 (374)
Q Consensus 291 ~-~~~Q~~WL~~~-L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~-~~~ 367 (374)
. ...-.+-+++. .....+.++.-+|++.|.+...... ... ...+.. .-.++|++|.||.|...... ...
T Consensus 150 ~~~~d~~~~~~~~~v~~l~~~~~D~iIvl~H~G~~~~~~----~~~--~~~la~--~~~giDvIigGH~H~~~~~~~~~~ 221 (257)
T cd07408 150 VTFEDPIEEAKKVIVAALKAKGADVIVALGHLGVDRTSS----PWT--STELAA--NVTGIDLIIDGHSHTTIEIGKKDG 221 (257)
T ss_pred cEEecHHHHHHHHHHHHHHhCCCCEEEEEeCcCcCCCCC----Ccc--HHHHHH--hCCCceEEEeCCCcccccCccccc
Confidence 0 01112223333 2222225788899999987654311 111 112222 12479999999999965543 233
Q ss_pred CCc
Q 017284 368 FPF 370 (374)
Q Consensus 368 ~~~ 370 (374)
+++
T Consensus 222 ~~~ 224 (257)
T cd07408 222 NNV 224 (257)
T ss_pred CCe
Confidence 444
No 60
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=98.48 E-value=5.8e-07 Score=87.84 Aligned_cols=74 Identities=18% Similarity=0.045 Sum_probs=50.2
Q ss_pred cEEEEEecCCCCC-C--c-------H----HHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh-hcC
Q 017284 162 YTFGIIGDLGQTY-N--S-------L----STLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA-AYQ 226 (374)
Q Consensus 162 ~~f~v~gD~~~~~-~--~-------~----~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~-~~~ 226 (374)
+||++.+|+|.+. . . . ..+..+.+.++||||++||+......+ . ..-..+.+.++.+. ..+
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~vliAGDlFd~~~Ps-~---~a~~~~~~~l~~l~~~~I 76 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDFVLIAGDLFDTNNPS-P---RALKLFLEALRRLKDAGI 76 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCEEEEccccccCCCCC-H---HHHHHHHHHHHHhccCCC
Confidence 5899999999982 1 1 1 233444555999999999999754332 1 12234455555554 479
Q ss_pred CeEEcCCCccccc
Q 017284 227 PWIWSAGNHEIEF 239 (374)
Q Consensus 227 P~~~v~GNHD~~~ 239 (374)
|++++.||||...
T Consensus 77 pv~~I~GNHD~~~ 89 (390)
T COG0420 77 PVVVIAGNHDSPS 89 (390)
T ss_pred cEEEecCCCCchh
Confidence 9999999999753
No 61
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=98.44 E-value=1.9e-06 Score=79.61 Aligned_cols=154 Identities=16% Similarity=0.118 Sum_probs=76.6
Q ss_pred HHHHHHh-CCCeE-EecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccc
Q 017284 180 LKHYMQS-GGQSV-LFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIA 257 (374)
Q Consensus 180 l~~~~~~-~~d~v-l~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~ 257 (374)
++++.+. ++|.+ +.+||+....... . ........+.++ .+++.++.||||++.... .+....+.+.
T Consensus 42 v~~~~~~~~~~~l~l~~GD~~~gs~~~--~-~~~g~~~~~~l~----~~g~da~~GNHefd~g~~-----~l~~~~~~~~ 109 (264)
T cd07411 42 IKRIRAERNPNTLLLDGGDTWQGSGEA--L-YTRGQAMVDALN----ALGVDAMVGHWEFTYGPE-----RVRELFGRLN 109 (264)
T ss_pred HHHHHHhcCCCeEEEeCCCccCCChHH--h-hcCChhHHHHHH----hhCCeEEecccccccCHH-----HHHHHHhhCC
Confidence 3445555 78877 5799999543210 0 111122223332 356665559999864321 1111111111
Q ss_pred cCcCCC--------CCCCCceEEEecCC--EEEEEEeCCCCCC----------CChHHHHHHHHHHhhcc-CCCCCeEEE
Q 017284 258 TPYTAS--------KSTNPLWYAIRRAS--AHIIVLSSYSPYV----------KYTPQWWWLREELKKVD-REKTPWLIV 316 (374)
Q Consensus 258 ~p~~~~--------~~~~~~~ysf~~g~--v~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~-~~~~~w~iv 316 (374)
.|.-.. ......|.-++.++ +.||.+.+..... ......+.+++.+++.. ..+...+|+
T Consensus 110 ~~~l~aN~~~~~~~~~~~~~~~i~~~~g~kVgviG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~iI~ 189 (264)
T cd07411 110 WPFLAANVYDDEAGERVFPPYRIKEVGGVKIGVIGQTFPYVPIANPPRFTPGLTFGIREEELQEVVVKLRREEGVDVVVL 189 (264)
T ss_pred CCEEEEEEEeCCCCCcccCCEEEEEECCEEEEEEEeccCCcccccCcCCCCCcEECCHHHHHHHHHHHHHHhCCCCEEEE
Confidence 121000 00112355667887 5566666532100 01233445555433321 256788999
Q ss_pred EecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCcccc
Q 017284 317 LMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (374)
Q Consensus 317 ~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~y 360 (374)
+.|-+... .. .+.++ .+||++|+||.|..
T Consensus 190 l~H~g~~~--------~~-------~la~~~~~iDlilgGH~H~~ 219 (264)
T cd07411 190 LSHNGLPV--------DV-------ELAERVPGIDVILSGHTHER 219 (264)
T ss_pred EecCCchh--------hH-------HHHhcCCCCcEEEeCccccc
Confidence 99976421 01 12222 57999999999974
No 62
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=98.39 E-value=3.4e-06 Score=78.68 Aligned_cols=155 Identities=16% Similarity=0.116 Sum_probs=77.5
Q ss_pred HHHHHhCCC-eEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccC
Q 017284 181 KHYMQSGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATP 259 (374)
Q Consensus 181 ~~~~~~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p 259 (374)
+++.+.+++ +++.+||+........ ..+.....+.++.+ .+- +.++||||+++... .+..+.+....|
T Consensus 42 ~~~r~~~~~~l~ld~GD~~~gs~~~~---~~~g~~~~~~ln~~--g~D-~~~lGNHefd~G~~-----~l~~~~~~~~~p 110 (281)
T cd07409 42 KELRAENPNVLFLNAGDAFQGTLWYT---LYKGNADAEFMNLL--GYD-AMTLGNHEFDDGVE-----GLAPFLNNLKFP 110 (281)
T ss_pred HHHHhcCCCEEEEeCCCCCCCcchhh---hcCChHHHHHHHhc--CCC-EEEeccccccCCHH-----HHHHHHHhCCCC
Confidence 334434666 5666999986432211 11112222333322 233 45779999975421 111111111112
Q ss_pred cCCC-----------CCCCCceEEEecCC--EEEEEEeCCCCC-------C-CChHHHHHHHHHHhhccCCCCCeEEEEe
Q 017284 260 YTAS-----------KSTNPLWYAIRRAS--AHIIVLSSYSPY-------V-KYTPQWWWLREELKKVDREKTPWLIVLM 318 (374)
Q Consensus 260 ~~~~-----------~~~~~~~ysf~~g~--v~fi~Ldt~~~~-------~-~~~~Q~~WL~~~L~~~~~~~~~w~iv~~ 318 (374)
.-.. ...-..|.-++.++ +-||.+-+.... + ...+..+.+++.+++.+..++.-+|++.
T Consensus 111 ~l~aNv~~~~~~~~~~~~~~p~~i~~~~G~kIgviG~~~~~~~~~~~~~~~~~~~d~~~~~~~~v~~lr~~~~D~II~l~ 190 (281)
T cd07409 111 VLSANIDTSNEPPLLDGLLKPSTILTVGGEKIGIIGYTTPDTTELSSPGGKVKFLDEIEAAQKEADKLKAQGVNKIIALS 190 (281)
T ss_pred EEEEeeecCCCccccccccCCeEEEEECCEEEEEEEEecCcccccccCCCceEECCHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 1100 00123456677888 556666553210 0 0123345566666665435688899999
Q ss_pred cccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCccccc
Q 017284 319 HVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (374)
Q Consensus 319 H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 361 (374)
|...-. . . .+.++ .++|++++||.|..-
T Consensus 191 H~G~~~-----------d-~---~la~~~~giD~IiggH~H~~~ 219 (281)
T cd07409 191 HSGYEV-----------D-K---EIARKVPGVDVIVGGHSHTFL 219 (281)
T ss_pred ccCchh-----------H-H---HHHHcCCCCcEEEeCCcCccc
Confidence 965310 1 1 22223 479999999999953
No 63
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=98.37 E-value=5.5e-06 Score=77.53 Aligned_cols=92 Identities=13% Similarity=0.066 Sum_probs=48.1
Q ss_pred ceEEEecCC--EEEEEEeCCCC-C--------C-CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHH
Q 017284 269 LWYAIRRAS--AHIIVLSSYSP-Y--------V-KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESM 336 (374)
Q Consensus 269 ~~ysf~~g~--v~fi~Ldt~~~-~--------~-~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~ 336 (374)
.|.-++.++ +-||.+-+... . + ....-.+-+++.+++.+..++.-+|++.|........... .+..
T Consensus 138 py~i~~~~G~kIgviGl~~~~~~~~~~~~~~~g~~f~d~~e~~~~~v~~lr~~~~D~IIvL~H~G~~~~~~~~~--~~~~ 215 (288)
T cd07412 138 PYTIKDVGGVKVGFIGAVTKDTPNLVSPDGVAGLEFTDEVEAINAVAPELKAGGVDAIVVLAHEGGSTKGGDDT--CSAA 215 (288)
T ss_pred CEEEEEECCEEEEEEeecCCCccceeccccccCceEcCHHHHHHHHHHHHHHCCCCEEEEEeCCCCCCCCCCcc--cccc
Confidence 455577888 55666643210 0 0 0122233455544444325688899999987643221110 0011
Q ss_pred HHHHHHHHHH--cCCcEEEEcCcccccc
Q 017284 337 RAVFESWFVH--SRVDFIFAGHVHAYER 362 (374)
Q Consensus 337 r~~l~~ll~~--~~VdlvlsGH~H~yeR 362 (374)
......++.+ -++|++|+||.|....
T Consensus 216 ~~~~~~l~~~~~~~iD~IlgGHsH~~~~ 243 (288)
T cd07412 216 SGPIADIVNRLDPDVDVVFAGHTHQAYN 243 (288)
T ss_pred ChhHHHHHhhcCCCCCEEEeCccCcccc
Confidence 1122333444 4799999999998654
No 64
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.31 E-value=2.9e-05 Score=70.96 Aligned_cols=180 Identities=13% Similarity=0.121 Sum_probs=91.7
Q ss_pred EEEEEecCCCCCCc---HHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~---~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
|++++||.=..... ...+.++.+. ++|++|..||.+-....- . ....+.+..+ .+- +.+.|||+++
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl----~---~~~~~~L~~~--G~D-~iTlGNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGI----T---PKIAKELLSA--GVD-VITMGNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCC----C---HHHHHHHHhc--CCC-EEEecccccC
Confidence 57889998554332 2334455444 899999999998643111 1 2222223222 233 4466999986
Q ss_pred cCCCCCCccccccccccc---ccCcCCC-CCCCCceEEEecCCEEE--EEEeCCCCCCCChHHHHHHHHHHhhccCCCCC
Q 017284 239 FMPNMGEVIPFKSYLHRI---ATPYTAS-KSTNPLWYAIRRASAHI--IVLSSYSPYVKYTPQWWWLREELKKVDREKTP 312 (374)
Q Consensus 239 ~~~~~~~~~~~~~y~~~f---~~p~~~~-~~~~~~~ysf~~g~v~f--i~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~ 312 (374)
.. +. ..+.... -.|.+-+ ......|.-++.+++++ |.|-+.........-.+-+++.+++.+. +++
T Consensus 71 ~g----el---~~~l~~~~~~l~~aN~~~~~pg~~~~i~~~~G~kIaVigl~g~~~~~~~~~P~~~~~~~v~~lk~-~~D 142 (255)
T cd07382 71 KK----EI---LDFIDEEPRLLRPANYPPGTPGRGYGVVEVNGKKIAVINLMGRVFMPPLDNPFRAADELLEELKE-EAD 142 (255)
T ss_pred cc----hH---HHHHhcCcCceEeeecCCCCCCCCeEEEEECCEEEEEEEEecccCCCcCCCHHHHHHHHHHHHhc-CCC
Confidence 43 11 1111111 1111111 11233467778887554 4443221111111123345566655432 678
Q ss_pred eEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccccccccc-CCcee
Q 017284 313 WLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS-FPFHF 372 (374)
Q Consensus 313 w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~-~~~h~ 372 (374)
.+||.+|.-.. .+ ...+.. ....+||+++.||+|..---..+. +|..|
T Consensus 143 ~IIV~~H~g~t---------sE--k~ala~-~ldg~VdvIvGtHTHv~t~d~~il~~gTa~ 191 (255)
T cd07382 143 IIFVDFHAEAT---------SE--KIALGW-YLDGRVSAVVGTHTHVQTADERILPGGTAY 191 (255)
T ss_pred EEEEEECCCCC---------HH--HHHHHH-hCCCCceEEEeCCCCccCCccEEeeCCeEE
Confidence 89999996321 11 112221 223469999999999964444333 55544
No 65
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=98.26 E-value=2.6e-06 Score=78.14 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=48.1
Q ss_pred cEEEEEecCCCCCCc---------HHHHHH----HHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-c-C
Q 017284 162 YTFGIIGDLGQTYNS---------LSTLKH----YMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-Y-Q 226 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~---------~~~l~~----~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~-~ 226 (374)
+||++++|+|.+... ...+++ +.+.++|+||++||+....... ......+.++++.+.. . +
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~lli~GDi~d~~~p~----~~~~~~~~~~l~~l~~~~~i 76 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDALLVAGDVFDTANPP----AEAQELFNAFFRNLSDANPI 76 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCC----HHHHHHHHHHHHHHHhcCCc
Confidence 589999999986421 122333 3344899999999999644321 1122334555665543 3 8
Q ss_pred CeEEcCCCcccc
Q 017284 227 PWIWSAGNHEIE 238 (374)
Q Consensus 227 P~~~v~GNHD~~ 238 (374)
|+++++||||..
T Consensus 77 ~v~~i~GNHD~~ 88 (253)
T TIGR00619 77 PIVVISGNHDSA 88 (253)
T ss_pred eEEEEccCCCCh
Confidence 999999999974
No 66
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=98.25 E-value=7.6e-06 Score=78.28 Aligned_cols=115 Identities=18% Similarity=0.227 Sum_probs=70.4
Q ss_pred CCCcEEEEEecCCCCCCc-----HHHH---------HH---HHHh--CCCeEEecccccccCCCCccccchhhHHHHHHH
Q 017284 159 DAPYTFGIIGDLGQTYNS-----LSTL---------KH---YMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~-----~~~l---------~~---~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~ 219 (374)
+..+|++.++|.|.-++. ...+ .+ +... +||.++++||+..++..- + +++|.+..+-+
T Consensus 46 ~n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~--~-~eEf~~~~~Rf 122 (410)
T KOG3662|consen 46 ENSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWA--G-DEEFKKRYERF 122 (410)
T ss_pred CCceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccC--C-hHHHHHHHHHH
Confidence 468999999999976421 0111 11 1111 999999999999744322 1 45564433223
Q ss_pred HHhh---hcCCeEEcCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCC
Q 017284 220 EQSA---AYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS 287 (374)
Q Consensus 220 ~~~~---~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~ 287 (374)
+.+. ..+|.+.++||||+++.... -.....||.-- .++...+|+.|+..|+++|++.
T Consensus 123 kkIf~~k~~~~~~~i~GNhDIGf~~~~-----~~~~i~Rfe~~------fg~~~r~f~v~~~tf~~~d~~~ 182 (410)
T KOG3662|consen 123 KKIFGRKGNIKVIYIAGNHDIGFGNEL-----IPEWIDRFESV------FGPTERRFDVGNLTFVMFDSNA 182 (410)
T ss_pred HHhhCCCCCCeeEEeCCcccccccccc-----chhHHHHHHHh------hcchhhhhccCCceeEEeeehh
Confidence 3332 47899999999999753211 11222333211 1235567999999999999965
No 67
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=98.25 E-value=1.8e-05 Score=87.44 Aligned_cols=190 Identities=15% Similarity=0.118 Sum_probs=94.4
Q ss_pred CCCcEEEEEecCCCCCCcHH----HHHHHHHhCCCeEEe-cccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCC
Q 017284 159 DAPYTFGIIGDLGQTYNSLS----TLKHYMQSGGQSVLF-LGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAG 233 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~~~----~l~~~~~~~~d~vl~-~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~G 233 (374)
...++|++++|+|....... .++++.+.+++.+++ +||++..... .. ...+....+.+..+ -.-+.++|
T Consensus 658 ~~~l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~--~~-~~~g~~~~~~ln~l---g~d~~~~G 731 (1163)
T PRK09419 658 NWELTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLY--SN-LLKGLPVLKMMKEM---GYDASTFG 731 (1163)
T ss_pred ceEEEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcch--hh-hcCChHHHHHHhCc---CCCEEEec
Confidence 34699999999996543333 334444558887765 9999853321 00 11112222333322 23366999
Q ss_pred CcccccCCCC-----CCcc---cccccc-ccccc-------CcCC-CCCCCCceEEEecCC--EEEEEEeCCCC-C----
Q 017284 234 NHEIEFMPNM-----GEVI---PFKSYL-HRIAT-------PYTA-SKSTNPLWYAIRRAS--AHIIVLSSYSP-Y---- 289 (374)
Q Consensus 234 NHD~~~~~~~-----~~~~---~~~~y~-~~f~~-------p~~~-~~~~~~~~ysf~~g~--v~fi~Ldt~~~-~---- 289 (374)
|||++.+... .+.. .-..|. ..|.+ ...+ .......|.-++.++ +-||.+-+... .
T Consensus 732 NHEfd~g~~~l~~~l~~~~~~~~~~~~~~~~fp~l~aNv~~~~~~~~~~~~~py~I~e~~G~kIgiiGltt~~~~~~~~p 811 (1163)
T PRK09419 732 NHEFDWGPDVLPDWLKGGGDPKNRHQFEKPDFPFVASNIYVKKTGKLVSWAKPYILVEVNGKKVGFIGLTTPETAYKTSP 811 (1163)
T ss_pred ccccccChHHHHHHHHhcccccccccccCCCCCEEEEEEEeCCCCccccccCCEEEEEECCEEEEEEEecccccccccCC
Confidence 9998654210 0000 000010 00110 0000 001123466667887 55677655321 0
Q ss_pred C-----CChHHHHHHHHHHhhcc-CCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcCccccc
Q 017284 290 V-----KYTPQWWWLREELKKVD-REKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYE 361 (374)
Q Consensus 290 ~-----~~~~Q~~WL~~~L~~~~-~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ye 361 (374)
. ......+.+++..++.+ ..++.-+|++.|......... .++ ....+.++. +||++|.||.|..-
T Consensus 812 ~~~~~l~f~d~~e~~~~~v~~Lr~~~~~D~VV~LsH~G~~~d~~~--~~~-----~~~~lA~~v~gIDvIigGHsH~~~ 883 (1163)
T PRK09419 812 GNVKNLEFKDPAEAAKKWVKELKEKEKVDAIIALTHLGSNQDRTT--GEI-----TGLELAKKVKGVDAIISAHTHTLV 883 (1163)
T ss_pred CCcCCcEEcCHHHHHHHHHHHHHhhcCCCEEEEEecCCccccccc--ccc-----HHHHHHHhCCCCCEEEeCCCCccc
Confidence 0 01222334444444432 256888999999876432111 111 122344433 79999999999853
No 68
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=98.16 E-value=0.00012 Score=68.09 Aligned_cols=184 Identities=14% Similarity=0.148 Sum_probs=90.1
Q ss_pred CCcEEEEEecCCCCCC----------c----HHHHHHHHH----hCCC-eEEecccccccCCCCccccchhhHHHHHHHH
Q 017284 160 APYTFGIIGDLGQTYN----------S----LSTLKHYMQ----SGGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIE 220 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~----------~----~~~l~~~~~----~~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~ 220 (374)
.+++|++.+|+|.... . ...++++.+ .+++ ++|..||.+........ ....+....+.+.
T Consensus 4 ~~ltILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~-~~~~g~~~~~~mN 82 (282)
T cd07407 4 GDINFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDA-SPPPGSYSNPIFR 82 (282)
T ss_pred ceEEEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceee-ecCCChHHHHHHH
Confidence 4789999999996421 1 122233322 2455 66789999964322110 0012233333333
Q ss_pred HhhhcCCe-EEcCCCcccccCCCCCCcccccccccccccCcC--------CCCC---CCCceEEEecC-C--EEEEEEeC
Q 017284 221 QSAAYQPW-IWSAGNHEIEFMPNMGEVIPFKSYLHRIATPYT--------ASKS---TNPLWYAIRRA-S--AHIIVLSS 285 (374)
Q Consensus 221 ~~~~~~P~-~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~--------~~~~---~~~~~ysf~~g-~--v~fi~Ldt 285 (374)
.+++ ..++||||++..... ...+..+......|.- +.+. ....|.-++.+ + +-||.+-+
T Consensus 83 ----~mgyDa~tlGNHEFd~g~~~--l~~l~~~~~~~~fp~l~aNi~~~~~~~~~~~~~~~y~i~~~~~G~kIgiiGltt 156 (282)
T cd07407 83 ----MMPYDLLTIGNHELYNYEVA--DDEYEGFVPSWGDRYLTSNVDITDDSGLLVPIGSRYRKFTTKHGLRVLAFGFLF 156 (282)
T ss_pred ----hcCCcEEeecccccCccccH--HHHHHHHHhhcCCCEEEEEEEEeCCCCcccccccceEEEEcCCCcEEEEEEEec
Confidence 3333 468999999632210 0000011111111110 0000 11235666765 6 45666655
Q ss_pred CCCC--C-----CC--hHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCc-EEEE
Q 017284 286 YSPY--V-----KY--TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVD-FIFA 354 (374)
Q Consensus 286 ~~~~--~-----~~--~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~Vd-lvls 354 (374)
...- . .. ..+.+|+.+.|++ .++.-+|++.|...-... + ..+....+.++. ++| ++|+
T Consensus 157 ~~~~~~~~~~f~d~~~~~~~~~v~~~l~~---~~~DvIIvlsH~G~~~d~-----~---~~~~~~~la~~~~~id~~Ii~ 225 (282)
T cd07407 157 DFKGAANGVTVQPVADVVQEPWFQDAINN---EDVDLILVLGHMPVRDDA-----E---FKVLHDAIRKIFPDTPIQFLG 225 (282)
T ss_pred ccccCCCCcEEcCHHHHHHHHHHHHHHHh---cCCCEEEEEeCCCCCCCc-----c---HHHHHHHHHHhCCCCCEEEEe
Confidence 3210 0 01 2333588888875 468889999998764221 1 111112233333 567 7999
Q ss_pred cCccccc
Q 017284 355 GHVHAYE 361 (374)
Q Consensus 355 GH~H~ye 361 (374)
||.|...
T Consensus 226 GHsH~~~ 232 (282)
T cd07407 226 GHSHVRD 232 (282)
T ss_pred CCccccc
Confidence 9999743
No 69
>PRK04036 DNA polymerase II small subunit; Validated
Probab=98.16 E-value=1.9e-05 Score=79.37 Aligned_cols=80 Identities=16% Similarity=0.168 Sum_probs=51.2
Q ss_pred CCCcEEEEEecCCCCCCcH--H---H-HHHHH---------HhCCCeEEecccccccCCC-Cccc-------cchhhHHH
Q 017284 159 DAPYTFGIIGDLGQTYNSL--S---T-LKHYM---------QSGGQSVLFLGDLSYADRY-EYND-------VGIRWDSW 215 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~~--~---~-l~~~~---------~~~~d~vl~~GD~~y~~~~-~~~~-------~~~~w~~~ 215 (374)
..+.+++++||+|.+.... . . ++.+. ..+++.+|++||++...+. +..+ ...+.+.+
T Consensus 241 ~~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l 320 (504)
T PRK04036 241 DEKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAA 320 (504)
T ss_pred CCccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHH
Confidence 3578999999999775421 1 1 22233 3478999999999964221 1100 01122345
Q ss_pred HHHHHHhhhcCCeEEcCCCcccc
Q 017284 216 GRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 216 ~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.++++.+...+|++.++||||..
T Consensus 321 ~~~L~~L~~~i~V~~ipGNHD~~ 343 (504)
T PRK04036 321 AEYLKQIPEDIKIIISPGNHDAV 343 (504)
T ss_pred HHHHHhhhcCCeEEEecCCCcch
Confidence 55666666788999999999974
No 70
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=98.14 E-value=3e-05 Score=72.40 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=30.3
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
.++.-+|++.|.......... ........+...+...++|++|.||.|...
T Consensus 172 ~~~D~VI~lsH~G~~~~~~~~--~~~~~~~~lA~~~~~~giD~IigGHsH~~~ 222 (285)
T cd07405 172 EKPDIVIAATHMGHYDNGEHG--SNAPGDVEMARALPAGGLDLIVGGHSQDPV 222 (285)
T ss_pred cCCCEEEEEecccccCCcccc--ccCchHHHHHHhcCCCCCCEEEeCCCCccc
Confidence 467889999998875322110 010111223333323589999999999865
No 71
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=98.09 E-value=6.1e-05 Score=76.37 Aligned_cols=188 Identities=15% Similarity=0.119 Sum_probs=99.9
Q ss_pred CCCCCcEEEEEecCCCCCC------------cHHH----HHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHH
Q 017284 157 HPDAPYTFGIIGDLGQTYN------------SLST----LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFI 219 (374)
Q Consensus 157 ~~~~~~~f~v~gD~~~~~~------------~~~~----l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~ 219 (374)
.....++|++..|+|..-. .... ++++.+. +..++|.+||++........ ......-.+.+
T Consensus 22 ~~~~~l~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~--~~~g~~~~~~m 99 (517)
T COG0737 22 AETVKLTILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDY--LTKGEPTVDLL 99 (517)
T ss_pred cCceeEEEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCcccccc--ccCCChHHHHH
Confidence 3356899999999987533 2222 2333333 44688999999965332111 11222223333
Q ss_pred HHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCc---------CCCCCCCCceEEEecCC--EEEEEEeCCC-
Q 017284 220 EQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPY---------TASKSTNPLWYAIRRAS--AHIIVLSSYS- 287 (374)
Q Consensus 220 ~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~---------~~~~~~~~~~ysf~~g~--v~fi~Ldt~~- 287 (374)
..+. .=..+.||||+.+... .+..+......|. .........|.-++.++ +-+|.+.+..
T Consensus 100 N~m~---yDa~tiGNHEFd~g~~-----~l~~~~~~~~fp~l~aNv~~~~~~~~~~~~Py~I~~~~g~KIgiIG~~~~~~ 171 (517)
T COG0737 100 NALG---YDAMTLGNHEFDYGLE-----ALARLLDEAKFPVLSANVYDKNSTGPPFFKPYAIKEVGGVKIGIIGLTTPTI 171 (517)
T ss_pred hhcC---CcEEeecccccccCHH-----HHHHHHhccCCceEEeeeEecCCCCccCcCCeEEEecCCeEEEEEEecCCcc
Confidence 3321 2256999999975421 0111111111121 00111234678888888 5567766521
Q ss_pred -CC---C-----CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcc
Q 017284 288 -PY---V-----KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 288 -~~---~-----~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 358 (374)
.+ . ......+++++.+.+.+..+..-+|++.|.+........... +....... .++|+++.||.|
T Consensus 172 ~~~~~~~~~~~~~f~d~~e~~~~~i~elk~~~vD~iI~LsH~G~~~d~~~~~~~-~~~~~~~~-----~~iD~i~~GH~H 245 (517)
T COG0737 172 PTWEKPNAIEGVTFRDPIEAAKKYIPELKGEGVDVIIALSHLGIEDDLELASEV-PGDVDVAV-----PGIDLIIGGHSH 245 (517)
T ss_pred cccccccccCCcEEcCHHHHHHHHHHHHHhcCCCEEEEEeccCcCccccccccc-cccccccc-----cCcceEeccCCc
Confidence 11 1 123456677777766543447889999999876543321110 00010001 449999999999
Q ss_pred cc
Q 017284 359 AY 360 (374)
Q Consensus 359 ~y 360 (374)
.+
T Consensus 246 ~~ 247 (517)
T COG0737 246 TV 247 (517)
T ss_pred cc
Confidence 63
No 72
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=98.08 E-value=7.4e-06 Score=70.35 Aligned_cols=41 Identities=20% Similarity=0.272 Sum_probs=27.6
Q ss_pred CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 187 ~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
++|.|+++||++..... ..+.+.++.+ ..|++.++||||..
T Consensus 42 ~~d~vi~~GDl~~~~~~---------~~~~~~l~~~--~~~~~~v~GNHD~~ 82 (168)
T cd07390 42 PDDTVYHLGDFSFGGKA---------GTELELLSRL--NGRKHLIKGNHDSS 82 (168)
T ss_pred CCCEEEEeCCCCCCCCh---------HHHHHHHHhC--CCCeEEEeCCCCch
Confidence 78999999999964321 1112333332 35899999999964
No 73
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=98.06 E-value=5.3e-06 Score=73.77 Aligned_cols=62 Identities=21% Similarity=0.236 Sum_probs=38.9
Q ss_pred EEecCCCCCCcHHHHHHHHH------------hCCCeEEecccccccCCCCccccchhhHHHHHHHHHh-----hhcCCe
Q 017284 166 IIGDLGQTYNSLSTLKHYMQ------------SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS-----AAYQPW 228 (374)
Q Consensus 166 v~gD~~~~~~~~~~l~~~~~------------~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~-----~~~~P~ 228 (374)
++||+|.... .+.++.+ .+.|.++++||++..... . .+..+.+..+ ....++
T Consensus 2 vi~DIHG~~~---~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~-----~---~~vl~~l~~l~~~~~~~~~~v 70 (208)
T cd07425 2 AIGDLHGDLD---AFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPD-----V---IEILWLLYKLEQEAAKAGGKV 70 (208)
T ss_pred EEeCccCCHH---HHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcC-----H---HHHHHHHHHHHHHHHhcCCeE
Confidence 6899998644 3333322 257899999999964321 1 2233333322 234689
Q ss_pred EEcCCCcccc
Q 017284 229 IWSAGNHEIE 238 (374)
Q Consensus 229 ~~v~GNHD~~ 238 (374)
+.+.||||..
T Consensus 71 ~~l~GNHE~~ 80 (208)
T cd07425 71 HFLLGNHELM 80 (208)
T ss_pred EEeeCCCcHH
Confidence 9999999974
No 74
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=98.06 E-value=1.3e-05 Score=78.53 Aligned_cols=73 Identities=15% Similarity=0.109 Sum_probs=46.1
Q ss_pred cEEEEEecCCCCCCc---------HHHHH----HHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cCC
Q 017284 162 YTFGIIGDLGQTYNS---------LSTLK----HYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQP 227 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~---------~~~l~----~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~P 227 (374)
+||++++|+|.+... ...+. .+.+.+||+||++||+...... . ......+.+++..+.. .+|
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~viIaGDifD~~~p-~---~~a~~~~~~~l~~L~~~~~~ 76 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDAIIVAGDIFDTGSP-P---SYARELYNRFVVNLQQTGCQ 76 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCEEEECCccccCCCC-c---HHHHHHHHHHHHHHHhcCCc
Confidence 589999999986321 01122 2334599999999999854321 1 1111223444444433 589
Q ss_pred eEEcCCCcccc
Q 017284 228 WIWSAGNHEIE 238 (374)
Q Consensus 228 ~~~v~GNHD~~ 238 (374)
+++++||||..
T Consensus 77 v~~I~GNHD~~ 87 (407)
T PRK10966 77 LVVLAGNHDSV 87 (407)
T ss_pred EEEEcCCCCCh
Confidence 99999999974
No 75
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.02 E-value=4.5e-05 Score=65.38 Aligned_cols=63 Identities=19% Similarity=0.112 Sum_probs=41.8
Q ss_pred cEEEEEecCCCCCCc-HHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 162 YTFGIIGDLGQTYNS-LSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~-~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.+++++||+|..... ....+.....++|+|||+||.+..... ..+... -..++++|.||.|..
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~vih~GD~~~~~~~---------~~l~~~-----~~~~i~~V~GN~D~~ 65 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDAVIHAGDSTSPFTL---------DALEGG-----LAAKLIAVRGNCDGE 65 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCEEEECCCcCCccch---------HHhhcc-----cccceEEEEccCCCc
Confidence 589999999997642 222233333499999999999963321 111110 135899999999974
No 76
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=97.99 E-value=0.00049 Score=63.15 Aligned_cols=179 Identities=16% Similarity=0.094 Sum_probs=92.5
Q ss_pred cEEEEEecCCCCCCc---HHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 162 YTFGIIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~---~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+|++++||.=....- ...+..+.+. ++||+|..||++-....- . ....+.+. ...+-++ +.|||++
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi----~---~~~~~~L~--~~GvDvi-T~GNH~~ 70 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGL----T---LKIYEFLK--QSGVNYI-TMGNHTW 70 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCC----C---HHHHHHHH--hcCCCEE-Eccchhc
Confidence 479999998543211 2334455554 899999999998532110 1 12222222 1245555 4599999
Q ss_pred ccCCCCCCcccccccccccccCcCCCCCCCCceEEEecCCEEEEEEeCCC-CCC-C--ChHHHHHHHHHHhhccCCCCCe
Q 017284 238 EFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWYAIRRASAHIIVLSSYS-PYV-K--YTPQWWWLREELKKVDREKTPW 313 (374)
Q Consensus 238 ~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~v~fi~Ldt~~-~~~-~--~~~Q~~WL~~~L~~~~~~~~~w 313 (374)
+..................+.|... .+..|..++.++..+-+++-.. .+. . ...-.+-+++.+++.+ .+++.
T Consensus 71 Dkge~~~~i~~~~~~lrpanyp~~~---pG~g~~i~~~nG~kiaVinl~G~~fm~~~~~~~Pf~~~d~~i~~lk-~~~d~ 146 (266)
T TIGR00282 71 FQKLILDVVINQKDLVRPLNFDTSF---AGKGSLVFEFNGAKIAVTNLQGTSVNLPFKTTNPFKVLKELINMLK-KDCDL 146 (266)
T ss_pred cCcHHHHHHhccccccccCCCCCCC---CCCCcEEEEECCEEEEEEECCCcccCCccccCCHHHHHHHHHHhhh-cCCCE
Confidence 6431000000000011111222211 2334566777876655555421 111 1 1111223444444432 24778
Q ss_pred EEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccc
Q 017284 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRM 366 (374)
Q Consensus 314 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~ 366 (374)
+||.+|.-. +.. +.....+.+.+|++|+.-|.|.-.--.++
T Consensus 147 IIVd~Haea-----------tsE-K~a~~~~ldg~vsaVvGtHtHV~TaD~~i 187 (266)
T TIGR00282 147 IFVDFHAET-----------TSE-KNAFGMAFDGYVTAVVGTHTHVPTADLRI 187 (266)
T ss_pred EEEEeCCCC-----------HHH-HHHHHHHhCCCccEEEeCCCCCCCCccee
Confidence 999999432 222 44566777889999999999996444333
No 77
>PRK09453 phosphodiesterase; Provisional
Probab=97.98 E-value=1.9e-05 Score=68.75 Aligned_cols=75 Identities=19% Similarity=0.202 Sum_probs=43.7
Q ss_pred cEEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 162 YTFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+|++++||+|......+ .++.+.+.++|.++++||++...............+..+.++.+ ..+++.+.||||..
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~--~~~v~~V~GNhD~~ 76 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADWLVHLGDVLYHGPRNPLPEGYAPKKVAELLNAY--ADKIIAVRGNCDSE 76 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCEEEEcccccccCcCCCCccccCHHHHHHHHHhc--CCceEEEccCCcch
Confidence 48999999996543222 23334445899999999998532210000000112223333322 35899999999963
No 78
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=97.96 E-value=0.00013 Score=74.46 Aligned_cols=193 Identities=16% Similarity=0.106 Sum_probs=88.1
Q ss_pred CCCcEEEEEecCCCCCC-------cHHH----HHHHHHh----CC-CeEEecccccccCCCCccccchhhHHHHHHHHHh
Q 017284 159 DAPYTFGIIGDLGQTYN-------SLST----LKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQS 222 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~-------~~~~----l~~~~~~----~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~ 222 (374)
...++|++++|+|.... .... ++++.+. ++ -++|.+||+...... .. -.....-.+.+..+
T Consensus 32 ~~~ltil~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~--s~-~~~g~~~i~~mN~~ 108 (551)
T PRK09558 32 TYKITILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPE--SD-LQDAEPDFRGMNLI 108 (551)
T ss_pred ceEEEEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEh--hh-hcCCchhHHHHhcC
Confidence 35799999999997532 2222 2333321 33 478899999853211 00 00111112222222
Q ss_pred hhcCCeEEcCCCcccccCCCC-C---CcccccccccccccCcCCCCCCCCceEEEecCC--EEEEEEeCCCC--C-----
Q 017284 223 AAYQPWIWSAGNHEIEFMPNM-G---EVIPFKSYLHRIATPYTASKSTNPLWYAIRRAS--AHIIVLSSYSP--Y----- 289 (374)
Q Consensus 223 ~~~~P~~~v~GNHD~~~~~~~-~---~~~~~~~y~~~f~~p~~~~~~~~~~~ysf~~g~--v~fi~Ldt~~~--~----- 289 (374)
.+- +.++||||++++... . ....|.-..........+. ..-..|.-++.++ +-||.+-+... +
T Consensus 109 --g~D-a~tlGNHEFD~G~~~L~~~~~~a~fp~l~aNv~~~~~g~-~~~~py~i~~~~G~kIgiiG~~t~~~~~~~~~~~ 184 (551)
T PRK09558 109 --GYD-AMAVGNHEFDNPLSVLRKQEKWAKFPFLSANIYQKSTGE-RLFKPYAIFDRQGLKIAVIGLTTEDTAKIGNPEY 184 (551)
T ss_pred --CCC-EEcccccccCcCHHHHHHhhccCCCCEEEEEEEECCCCC-cccCCeEEEEECCEEEEEEEEeccccccccCCCC
Confidence 222 457899999764310 0 0001110000000000010 1123466678888 55666654221 0
Q ss_pred -C--CChHHHHHHHHHHhhccC-CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 290 -V--KYTPQWWWLREELKKVDR-EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 290 -~--~~~~Q~~WL~~~L~~~~~-~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
. ......+-+++..++.+. .+..-+|++.|.......... ...... ..+..-+...+||++|.||.|..
T Consensus 185 ~~~~~f~d~~e~a~~~v~~Lk~~~~~D~IV~LsH~G~~~~~~~~-~~~~~d-~~la~~~~~~~IDvIlgGHsH~~ 257 (551)
T PRK09558 185 FTDIEFRDPAEEAKKVIPELKQTEKPDVIIALTHMGHYDDGEHG-SNAPGD-VEMARSLPAGGLDMIVGGHSQDP 257 (551)
T ss_pred cCCceECCHHHHHHHHHHHHHhccCCCEEEEEeccccccCCccC-CCCccH-HHHHHhCCccCceEEEeCCCCcc
Confidence 0 011122223333333321 468889999998875322110 000000 12222222237999999999974
No 79
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.86 E-value=3.3e-05 Score=64.74 Aligned_cols=64 Identities=14% Similarity=0.207 Sum_probs=38.5
Q ss_pred EEEecCCCCCC-cHHHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHH-hhhcCCeEEcCCCcc
Q 017284 165 GIIGDLGQTYN-SLSTLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQ-SAAYQPWIWSAGNHE 236 (374)
Q Consensus 165 ~v~gD~~~~~~-~~~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~-~~~~~P~~~v~GNHD 236 (374)
+++||.+..-. ....++.+.+. ..|++|++||+.-.+.. . +.|...... ....+|.|.+-|||+
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~-----~---~~~~~y~~g~~~~pipTyf~ggn~~ 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDED-----D---EELEAYKDGSKKVPIPTYFLGGNNP 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccc-----h---hhHHHHhcCCccCCCCEEEECCCCC
Confidence 36788876532 12333333333 78999999999853321 1 233333332 234679999999996
No 80
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=97.81 E-value=0.00026 Score=72.19 Aligned_cols=76 Identities=18% Similarity=0.115 Sum_probs=43.0
Q ss_pred CceEEEecCC--EEEEEEeCCCC-C---CCC-----hHHHHHHH---HHHhhccCCCCCeEEEEecccceecCCCCCCCC
Q 017284 268 PLWYAIRRAS--AHIIVLSSYSP-Y---VKY-----TPQWWWLR---EELKKVDREKTPWLIVLMHVPLYSSNVVHYMEG 333 (374)
Q Consensus 268 ~~~ysf~~g~--v~fi~Ldt~~~-~---~~~-----~~Q~~WL~---~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~ 333 (374)
..|.-++.++ +-||.|.+... . ... ....+=++ ++|++ .+..-+|++.|..... .
T Consensus 129 ~p~~i~~~~g~kIgiiGl~~~~~~~~~~~~~~~~~f~d~~~~~~~~v~~Lk~---~g~D~II~lsH~g~~~--------d 197 (550)
T TIGR01530 129 KPSAIFERAGEKIAIIGLDTVKKTVESSSPGKDIKFIDEIAAAQIAANALKQ---QGINKIILLSHAGFEK--------N 197 (550)
T ss_pred CceEEEEECCeEEEEEEeecCcccccccCCCCceEECCHHHHHHHHHHHHHh---CCCCEEEEEecCCcHH--------H
Confidence 3466677887 67888865211 0 000 11111122 34443 5678899999964310 0
Q ss_pred HHHHHHHHHHHHH-cCCcEEEEcCccccc
Q 017284 334 ESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (374)
Q Consensus 334 ~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 361 (374)
..+.++ .+||++|+||.|..-
T Consensus 198 -------~~la~~~~~iD~IigGHsH~~~ 219 (550)
T TIGR01530 198 -------CEIAQKINDIDVIVSGDSHYLL 219 (550)
T ss_pred -------HHHHhcCCCCCEEEeCCCCccc
Confidence 123333 379999999999953
No 81
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.72 E-value=5.5e-05 Score=65.17 Aligned_cols=49 Identities=22% Similarity=0.218 Sum_probs=31.4
Q ss_pred hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 186 SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 186 ~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.+||.++++||++....... ...+.... ........+|++.++||||..
T Consensus 40 ~~~d~lii~GDl~~~~~~~~---~~~~~~~~-~~~~~~~~~~v~~i~GNHD~~ 88 (172)
T cd07391 40 YGPERLIILGDLKHSFGGLS---RQEFEEVA-FLRLLAKDVDVILIRGNHDGG 88 (172)
T ss_pred cCCCEEEEeCcccccccccC---HHHHHHHH-HHHhccCCCeEEEEcccCccc
Confidence 49999999999996433211 11122211 233334578999999999974
No 82
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=97.72 E-value=0.00031 Score=66.43 Aligned_cols=38 Identities=24% Similarity=0.241 Sum_probs=25.6
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcCcccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAY 360 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~y 360 (374)
.+..-+|++.|..-+. .. ..+.++. ++|++|.||.|.+
T Consensus 206 ~gvD~II~LsH~g~~~-------~d-------~~lA~~v~gIDvIigGHsH~~ 244 (313)
T cd08162 206 QGINKIILLSHLQQIS-------IE-------QALAALLSGVDVIIAGGSNTL 244 (313)
T ss_pred CCCCEEEEEecccccc-------hH-------HHHHhcCCCCCEEEeCCCCcc
Confidence 5678899999963111 11 1234443 7999999999986
No 83
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=97.66 E-value=0.00033 Score=65.20 Aligned_cols=176 Identities=20% Similarity=0.235 Sum_probs=98.0
Q ss_pred cEEEEEecCCCCCC-cHHHHHHHHHh---CCCeEEecccccccCCCCc-c--ccchhhHHHHHHHH----HhhhcCCeEE
Q 017284 162 YTFGIIGDLGQTYN-SLSTLKHYMQS---GGQSVLFLGDLSYADRYEY-N--DVGIRWDSWGRFIE----QSAAYQPWIW 230 (374)
Q Consensus 162 ~~f~v~gD~~~~~~-~~~~l~~~~~~---~~d~vl~~GD~~y~~~~~~-~--~~~~~w~~~~~~~~----~~~~~~P~~~ 230 (374)
+|+||-||+|..-+ ...++..+.+. +.|++|++||+---.+... . .+...+.....+.. ...+.+|.+.
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDLLlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTIF 80 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDLLLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTIF 80 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccEEEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEEE
Confidence 48999999998643 34566666666 8999999999964222110 0 01222333333332 3346688999
Q ss_pred cCCCcccccCCCCCCcccccccccccccCcCCCCCCCCceE-----EEecCCEEEEEEeC---CCCCCCC----------
Q 017284 231 SAGNHEIEFMPNMGEVIPFKSYLHRIATPYTASKSTNPLWY-----AIRRASAHIIVLSS---YSPYVKY---------- 292 (374)
Q Consensus 231 v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~~~~~~~~~~~y-----sf~~g~v~fi~Ldt---~~~~~~~---------- 292 (374)
+=||||.. +|. +.+|+.+= ...+.|| ..++|+|++-.|+. ..+|..+
T Consensus 81 IGGNHEAs------------nyL--~eLpyGGw-VApNIyYlG~agVv~~~gvRIggiSGI~k~~dy~kgh~E~ppyn~s 145 (456)
T KOG2863|consen 81 IGGNHEAS------------NYL--QELPYGGW-VAPNIYYLGYAGVVNFGGVRIGGISGIYKEHDYRKGHFEWPPYNNS 145 (456)
T ss_pred ecCchHHH------------HHH--HhcccCce-eccceEEeeecceEEECCEEEeeccchhhhhhcccCCCCCCCccch
Confidence 99999963 121 12333211 1234555 46789999998877 2222110
Q ss_pred -------hHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHH-------H----------HHHHHHHHHHcC
Q 017284 293 -------TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGES-------M----------RAVFESWFVHSR 348 (374)
Q Consensus 293 -------~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~-------~----------r~~l~~ll~~~~ 348 (374)
-.+.+ ...|.+. +.+-=|.+.|-=+-.-. ++++... . ...+++||++-+
T Consensus 146 tiRsiYHvR~~d--V~~Lkql---k~piDIfLSHDWP~GI~--~yGd~~~LLr~KPFFrqeie~~~LGSp~~~eLL~~Lk 218 (456)
T KOG2863|consen 146 TIRSIYHVRISD--VAKLKQL---KHPIDIFLSHDWPRGIY--YYGDKKQLLRLKPFFRQEIEEGKLGSPALEELLEDLK 218 (456)
T ss_pred hhhhhhhhhhhh--hHHHHhh---cCcceEEeecCCCcchh--hcCCHHHHHhcCcHHHHHHhcCCcCChHHHHHHHHhC
Confidence 11111 1223332 23334666775332211 1111111 1 236778999999
Q ss_pred CcEEEEcCccc
Q 017284 349 VDFIFAGHVHA 359 (374)
Q Consensus 349 VdlvlsGH~H~ 359 (374)
...+|+.|.|+
T Consensus 219 P~yWfsAHLH~ 229 (456)
T KOG2863|consen 219 PQYWFSAHLHV 229 (456)
T ss_pred cchhhhhhHhh
Confidence 99999999998
No 84
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.58 E-value=0.00016 Score=64.24 Aligned_cols=68 Identities=16% Similarity=0.065 Sum_probs=41.7
Q ss_pred EEecCCCCCCcH---HHHHH-HHHh--CCCeEEecccccccCCCCccccchhhHHHHH----HHHHhh-hcCCeEEcCCC
Q 017284 166 IIGDLGQTYNSL---STLKH-YMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGR----FIEQSA-AYQPWIWSAGN 234 (374)
Q Consensus 166 v~gD~~~~~~~~---~~l~~-~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~----~~~~~~-~~~P~~~v~GN 234 (374)
.+||.|.+.... ..+.. +... +.|.+.++||++..-.. ...|.+.-+ .+..+. +..|++.+.||
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a~~ad~lyilGDifd~w~g-----~~~~~~~~~~V~~~l~~~a~~G~~v~~i~GN 76 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEAAQADALYILGDIFDGWIG-----DDEPPQLHRQVAQKLLRLARKGTRVYYIHGN 76 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhccccCcEEEEechhhhhhhc-----CCcccHHHHHHHHHHHHHHhcCCeEEEecCc
Confidence 589999984322 22333 3333 45999999999964332 223444332 223333 45899999999
Q ss_pred cccc
Q 017284 235 HEIE 238 (374)
Q Consensus 235 HD~~ 238 (374)
||.-
T Consensus 77 ~Dfl 80 (237)
T COG2908 77 HDFL 80 (237)
T ss_pred hHHH
Confidence 9974
No 85
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.56 E-value=0.0012 Score=69.68 Aligned_cols=59 Identities=20% Similarity=0.145 Sum_probs=33.2
Q ss_pred HHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
+-+++...+.+..++.-+|++.|..+-........++ .. ..+..--+||+++.||.|..
T Consensus 296 eaa~~~v~~Lr~~GaDvIIaLsH~G~~~d~~~~~~En--~~---~~LA~v~GIDaIvgGHsH~~ 354 (814)
T PRK11907 296 EAVRDIIPTMRAAGADIVLVLSHSGIGDDQYEVGEEN--VG---YQIASLSGVDAVVTGHSHAE 354 (814)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCcccccccccccc--hh---hHHhcCCCCCEEEECCCCCc
Confidence 3344444333325788899999987643211111111 11 12222357999999999994
No 86
>cd07381 MPP_CapA CapA and related proteins, metallophosphatase domain. CapA is one of three membrane-associated enzymes in Bacillus anthracis that is required for synthesis of gamma-polyglutamic acid (PGA), a major component of the bacterial capsule. The YwtB and PgsA proteins of Bacillus subtilis are closely related to CapA and are also included in this alignment model. CapA belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal
Probab=97.53 E-value=0.0025 Score=57.91 Aligned_cols=99 Identities=10% Similarity=0.083 Sum_probs=56.6
Q ss_pred ceEEEecCC--EEEEEEeCCCCCC----------CChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHH
Q 017284 269 LWYAIRRAS--AHIIVLSSYSPYV----------KYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESM 336 (374)
Q Consensus 269 ~~ysf~~g~--v~fi~Ldt~~~~~----------~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~ 336 (374)
.+.-++.++ +.|+.+.+...-. ....-.+-+++.++++++ ++..+||+.|-..-... .....
T Consensus 122 ~~~i~~~~g~kVg~ig~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lr~-~~D~vIv~~H~G~e~~~-----~p~~~ 195 (239)
T cd07381 122 RPAILEVNGIKVAFLAYTYGTNGIPLAAGARPGGVNPLDLERIAADIAEAKK-KADIVIVSLHWGVEYSY-----YPTPE 195 (239)
T ss_pred CcEEEEECCEEEEEEEEECCCCCCcCcccCCccccCccCHHHHHHHHHHHhh-cCCEEEEEecCcccCCC-----CCCHH
Confidence 445567777 5666665532100 111123445666665532 48899999995432111 11122
Q ss_pred HHHHHHHHHHcCCcEEEEcCcccccccccccCCceecC
Q 017284 337 RAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFHFFY 374 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h~~~ 374 (374)
...+...+...++|+|+.||.|..+-. .+++++-+||
T Consensus 196 ~~~la~~l~~~G~D~IiG~H~Hv~q~~-E~~~~~~I~Y 232 (239)
T cd07381 196 QRELARALIDAGADLVIGHHPHVLQGI-EIYKGKLIFY 232 (239)
T ss_pred HHHHHHHHHHCCCCEEEcCCCCcCCCe-EEECCEEEEE
Confidence 335555556689999999999997543 4566666554
No 87
>PHA02239 putative protein phosphatase
Probab=97.47 E-value=0.00027 Score=64.02 Aligned_cols=70 Identities=17% Similarity=0.268 Sum_probs=41.7
Q ss_pred cEEEEEecCCCCCCcH-HHHHHHHHh--CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 162 YTFGIIGDLGQTYNSL-STLKHYMQS--GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~-~~l~~~~~~--~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
++++++||+|...... ..++.+... ..|.++++||++..... . . +.....++......+++.+.||||..
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d~li~lGD~iDrG~~-s---~---~v~~~l~~~~~~~~~~~~l~GNHE~~ 73 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEETIVFLGDYVDRGKR-S---K---DVVNYIFDLMSNDDNVVTLLGNHDDE 73 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCCEEEEecCcCCCCCC-h---H---HHHHHHHHHhhcCCCeEEEECCcHHH
Confidence 3789999999653322 233334332 25999999999964321 0 1 22222222222345789999999974
No 88
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.39 E-value=0.0015 Score=72.42 Aligned_cols=48 Identities=21% Similarity=0.189 Sum_probs=30.8
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCccccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAYE 361 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~ye 361 (374)
.++.-+|++.|...-...... ..+ ....+|.++ -+||+++.||.|..-
T Consensus 233 ~gaDvII~l~H~G~~~~~~~~--~~e---n~~~~la~~~~gID~Il~GHsH~~~ 281 (1163)
T PRK09419 233 GGADVIVALAHSGIESEYQSS--GAE---DSVYDLAEKTKGIDAIVAGHQHGLF 281 (1163)
T ss_pred cCCCEEEEEeccCcCCCCCCC--Ccc---hHHHHHHHhCCCCcEEEeCCCcccc
Confidence 578889999998864332111 111 122334434 479999999999964
No 89
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.38 E-value=0.00043 Score=62.24 Aligned_cols=70 Identities=23% Similarity=0.399 Sum_probs=45.5
Q ss_pred cEEEEEecCCCCCCc--------------HHHHHHHHH----hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh
Q 017284 162 YTFGIIGDLGQTYNS--------------LSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~--------------~~~l~~~~~----~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~ 223 (374)
-+.++++|+|.+... .++++++.+ .+||.+|++||+...... ...|..+.+.++.+
T Consensus 15 ~~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~vIi~GDl~h~~~~-----~~~~~~~~~~l~~~- 88 (225)
T TIGR00024 15 GDKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEALIINGDLKHEFKK-----GLEWRFIREFIEVT- 88 (225)
T ss_pred cCeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCEEEEcCccccccCC-----hHHHHHHHHHHHhc-
Confidence 468899999987421 134444433 389999999999964332 12344444445443
Q ss_pred hcCCeEEcCCCcccc
Q 017284 224 AYQPWIWSAGNHEIE 238 (374)
Q Consensus 224 ~~~P~~~v~GNHD~~ 238 (374)
..+++.+.||||..
T Consensus 89 -~~~v~~V~GNHD~~ 102 (225)
T TIGR00024 89 -FRDLILIRGNHDAL 102 (225)
T ss_pred -CCcEEEECCCCCCc
Confidence 35899999999963
No 90
>smart00854 PGA_cap Bacterial capsule synthesis protein PGA_cap. This protein is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein.
Probab=97.37 E-value=0.0037 Score=56.79 Aligned_cols=69 Identities=12% Similarity=0.157 Sum_probs=41.5
Q ss_pred HHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCceecC
Q 017284 299 LREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFHFFY 374 (374)
Q Consensus 299 L~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h~~~ 374 (374)
+++.+++++ .++..+||+.|-..-.... -.... ..+...+.+.++|+|+.||.|..+.. .+++++-++|
T Consensus 162 i~~~i~~lr-~~~D~vIv~~H~G~e~~~~----p~~~~-~~~A~~l~~~G~DvIiG~H~H~~~~~-e~~~~~~I~Y 230 (239)
T smart00854 162 ILADIARAR-KKADVVIVSLHWGVEYQYE----PTDEQ-RELAHALIDAGADVVIGHHPHVLQPI-EIYKGKLIAY 230 (239)
T ss_pred HHHHHHHHh-ccCCEEEEEecCccccCCC----CCHHH-HHHHHHHHHcCCCEEEcCCCCcCCce-EEECCEEEEE
Confidence 445555543 3588999999965421110 11222 34444455579999999999998644 3555655543
No 91
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=97.29 E-value=0.00037 Score=63.15 Aligned_cols=68 Identities=26% Similarity=0.382 Sum_probs=41.7
Q ss_pred EEEEEecCCCCCCcHH-HHHHHH---Hh-------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYM---QS-------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWS 231 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~---~~-------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v 231 (374)
|++++||+|....... .++.+. +. +.|.++++||++..+.. -.+..+.+..+...-.++.+
T Consensus 2 ~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~--------s~evl~~l~~l~~~~~~~~v 73 (234)
T cd07423 2 PFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPD--------SPEVLRLVMSMVAAGAALCV 73 (234)
T ss_pred CeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCC--------HHHHHHHHHHHhhCCcEEEE
Confidence 7899999998654322 223321 00 25899999999964321 12333444444333467899
Q ss_pred CCCcccc
Q 017284 232 AGNHEIE 238 (374)
Q Consensus 232 ~GNHD~~ 238 (374)
.||||..
T Consensus 74 ~GNHE~~ 80 (234)
T cd07423 74 PGNHDNK 80 (234)
T ss_pred ECCcHHH
Confidence 9999963
No 92
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=97.27 E-value=0.00037 Score=61.91 Aligned_cols=61 Identities=21% Similarity=0.221 Sum_probs=39.2
Q ss_pred EEEEEecCCCCCCcHHHHHHHHH----h-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQ----S-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~----~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
|++++||+|... ..+.++.+ . ++|.++++||+++.... . .+ .++.+.. .+++.+.||||.
T Consensus 2 ri~~isDiHg~~---~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~-----~---~~---~~~~l~~-~~~~~v~GNhe~ 66 (207)
T cd07424 2 RDFVVGDIHGHY---SLLQKALDAVGFDPARDRLISVGDLIDRGPE-----S---LA---CLELLLE-PWFHAVRGNHEQ 66 (207)
T ss_pred CEEEEECCCCCH---HHHHHHHHHcCCCCCCCEEEEeCCcccCCCC-----H---HH---HHHHHhc-CCEEEeECCChH
Confidence 689999999653 33333322 1 58999999999964321 1 12 2222222 468899999996
Q ss_pred c
Q 017284 238 E 238 (374)
Q Consensus 238 ~ 238 (374)
.
T Consensus 67 ~ 67 (207)
T cd07424 67 M 67 (207)
T ss_pred H
Confidence 4
No 93
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=97.24 E-value=0.00046 Score=63.89 Aligned_cols=66 Identities=21% Similarity=0.278 Sum_probs=41.2
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHH-hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+++++||+|....... .++.+.- .+.|.++++||++..+.. . .+..+.+..+ ..+++.+.||||..
T Consensus 2 ~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~-----s---~~vl~~l~~l--~~~~~~VlGNHD~~ 69 (275)
T PRK00166 2 ATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPD-----S---LEVLRFVKSL--GDSAVTVLGNHDLH 69 (275)
T ss_pred cEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcC-----H---HHHHHHHHhc--CCCeEEEecChhHH
Confidence 6789999998654332 2233321 257999999999964321 1 2233333333 34688999999974
No 94
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=97.13 E-value=0.0013 Score=59.91 Aligned_cols=74 Identities=14% Similarity=0.183 Sum_probs=45.1
Q ss_pred EEEecCCCCCCc--HHHHHHHH----Hh-----CCCeEEecccccccCCCCcc--------ccchhhHHHHHHHHHhhhc
Q 017284 165 GIIGDLGQTYNS--LSTLKHYM----QS-----GGQSVLFLGDLSYADRYEYN--------DVGIRWDSWGRFIEQSAAY 225 (374)
Q Consensus 165 ~v~gD~~~~~~~--~~~l~~~~----~~-----~~d~vl~~GD~~y~~~~~~~--------~~~~~w~~~~~~~~~~~~~ 225 (374)
+++||+|.+... ...+..+. .. ++|.++++||++........ .....+..+.+.++.+...
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~~ 81 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPSH 81 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhcccC
Confidence 578999976432 12222222 22 45999999999964211000 0012234455666677677
Q ss_pred CCeEEcCCCcccc
Q 017284 226 QPWIWSAGNHEIE 238 (374)
Q Consensus 226 ~P~~~v~GNHD~~ 238 (374)
+|++.++||||..
T Consensus 82 ~~v~~ipGNHD~~ 94 (243)
T cd07386 82 IKIIIIPGNHDAV 94 (243)
T ss_pred CeEEEeCCCCCcc
Confidence 9999999999974
No 95
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=97.10 E-value=0.00082 Score=61.33 Aligned_cols=66 Identities=18% Similarity=0.298 Sum_probs=40.9
Q ss_pred cEEEEEecCCCCCCcHHHHHHHHHh-------------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCe
Q 017284 162 YTFGIIGDLGQTYNSLSTLKHYMQS-------------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPW 228 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l~~~~~~-------------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~ 228 (374)
.|++++||+|..... +.++.+. +-|.++++||++..+.. . .+..+.+..+...-.+
T Consensus 1 ~~~~vIGDIHG~~~~---L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~-----S---~~vl~~~~~~~~~~~~ 69 (245)
T PRK13625 1 MKYDIIGDIHGCYQE---FQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPH-----S---LRMIEIVWELVEKKAA 69 (245)
T ss_pred CceEEEEECccCHHH---HHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcC-----h---HHHHHHHHHHhhCCCE
Confidence 368999999986433 3333322 23689999999964321 1 2223333333334578
Q ss_pred EEcCCCcccc
Q 017284 229 IWSAGNHEIE 238 (374)
Q Consensus 229 ~~v~GNHD~~ 238 (374)
+++.||||..
T Consensus 70 ~~l~GNHE~~ 79 (245)
T PRK13625 70 YYVPGNHCNK 79 (245)
T ss_pred EEEeCccHHH
Confidence 9999999963
No 96
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=97.07 E-value=0.015 Score=53.21 Aligned_cols=137 Identities=12% Similarity=0.098 Sum_probs=75.1
Q ss_pred EEEEecCCCCCCcH--HHHHHHHHh---------------CCCeEEecccccccCCCCcc--------------ccchhh
Q 017284 164 FGIIGDLGQTYNSL--STLKHYMQS---------------GGQSVLFLGDLSYADRYEYN--------------DVGIRW 212 (374)
Q Consensus 164 f~v~gD~~~~~~~~--~~l~~~~~~---------------~~d~vl~~GD~~y~~~~~~~--------------~~~~~w 212 (374)
++++||.+.+.... ..++.+.+. +...+|++||.+...+.... +.....
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Confidence 67889998775532 122222111 33479999999974432110 112334
Q ss_pred HHHHHHHHHhhhcCCeEEcCCCcccccCCCCCCcccccccccccccCc--CCCCCCCCceEEEecCCEEEEEEeCCC---
Q 017284 213 DSWGRFIEQSAAYQPWIWSAGNHEIEFMPNMGEVIPFKSYLHRIATPY--TASKSTNPLWYAIRRASAHIIVLSSYS--- 287 (374)
Q Consensus 213 ~~~~~~~~~~~~~~P~~~v~GNHD~~~~~~~~~~~~~~~y~~~f~~p~--~~~~~~~~~~ysf~~g~v~fi~Ldt~~--- 287 (374)
+.+..++..+.+.+|+...|||||-... .... .++. ...|.... ..-....+- |.|++++++|++.....
T Consensus 82 ~~ld~~l~~l~~~i~V~imPG~~Dp~~~-~lPQ-qplh--~~lfp~s~~~~~~~~vtNP-~~~~i~g~~vLgtsGqni~D 156 (257)
T cd07387 82 KELDNFLSQLASSVPVDLMPGEFDPANH-SLPQ-QPLH--RCLFPKSSNYSTLNLVTNP-YEFSIDGVRVLGTSGQNVDD 156 (257)
T ss_pred HHHHHHHHhhhcCCeEEECCCCCCcccc-cCCC-CCCC--HHHhhcccccCCcEEeCCC-eEEEECCEEEEEECCCCHHH
Confidence 5566677788889999999999997432 1111 1110 01111000 000011122 46899999999887743
Q ss_pred --CCCCChHHHHHHHHHHhh
Q 017284 288 --PYVKYTPQWWWLREELKK 305 (374)
Q Consensus 288 --~~~~~~~Q~~WL~~~L~~ 305 (374)
.|...+.-.+.|++.|+.
T Consensus 157 i~ky~~~~~~l~~me~~L~w 176 (257)
T cd07387 157 ILKYSSLESRLDILERTLKW 176 (257)
T ss_pred HHHhCCCCCHHHHHHHHHHh
Confidence 233344456778888765
No 97
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=97.06 E-value=0.016 Score=61.13 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=28.5
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcEEEEcCccccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDFIFAGHVHAYE 361 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~VdlvlsGH~H~ye 361 (374)
.++.-+|++.|...-..... .+.+. .-. .+.+. +||++|+||.|..-
T Consensus 243 ~GaDvIIaLsH~G~~~d~~~---~~~en--a~~-~l~~v~gID~IlgGHsH~~~ 290 (780)
T PRK09418 243 EGADVIVALAHSGVDKSGYN---VGMEN--ASY-YLTEVPGVDAVLMGHSHTEV 290 (780)
T ss_pred cCCCEEEEEeccCccccccc---ccchh--hhH-HHhcCCCCCEEEECCCCCcc
Confidence 56888999999876432111 11111 111 13443 79999999999864
No 98
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=97.00 E-value=0.0059 Score=63.25 Aligned_cols=46 Identities=17% Similarity=0.309 Sum_probs=28.4
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCcccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~y 360 (374)
.++.-+|++.|...-...... ..+... ..+.+ -+||++++||.|..
T Consensus 194 ~gaDvII~LsH~G~~~d~~~~--~~en~~----~~l~~v~gID~Il~GHsH~~ 240 (626)
T TIGR01390 194 KGADIIVALAHSGISADPYQP--GAENSA----YYLTKVPGIDAVLFGHSHAV 240 (626)
T ss_pred cCCCEEEEEeccCcCCCcccc--ccchHH----HHHhcCCCCCEEEcCCCCcc
Confidence 568889999998764321100 111111 12334 47999999999994
No 99
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=96.93 E-value=0.019 Score=59.67 Aligned_cols=46 Identities=17% Similarity=0.208 Sum_probs=27.8
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHH-cCCcEEEEcCcccc
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVH-SRVDFIFAGHVHAY 360 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~-~~VdlvlsGH~H~y 360 (374)
.++.-+|++.|...-...... ..+... .. +.+ -+||+++.||.|..
T Consensus 217 ~gaDvII~LsH~G~~~d~~~~--~aen~~---~~-l~~v~gID~Il~GHsH~~ 263 (649)
T PRK09420 217 KGADIVVAIPHSGISADPYKA--MAENSV---YY-LSEVPGIDAIMFGHSHAV 263 (649)
T ss_pred cCCCEEEEEecCCcCCCCccc--cccchh---HH-HhcCCCCCEEEeCCCCcc
Confidence 568889999998763221100 111111 11 233 47999999999985
No 100
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.93 E-value=0.02 Score=47.46 Aligned_cols=65 Identities=22% Similarity=0.232 Sum_probs=40.4
Q ss_pred EEEEEecCCCCCC--------------cHHHHHHHHHh-CC-CeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC
Q 017284 163 TFGIIGDLGQTYN--------------SLSTLKHYMQS-GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ 226 (374)
Q Consensus 163 ~f~v~gD~~~~~~--------------~~~~l~~~~~~-~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~ 226 (374)
.+-.+||+|.+.. ....+..+++. +| |.+.++||++..... + ....+.++.+-..
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D~lwhLGDl~~~~n~-----~---~~a~~IlerLnGr- 75 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDDVLWHLGDLSSGANR-----E---RAAGLILERLNGR- 75 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccceEEEecccccccch-----h---hHHHHHHHHcCCc-
Confidence 3566788887632 11234455554 44 789999999954321 1 3455556665443
Q ss_pred CeEEcCCCccc
Q 017284 227 PWIWSAGNHEI 237 (374)
Q Consensus 227 P~~~v~GNHD~ 237 (374)
...++||||-
T Consensus 76 -khlv~GNhDk 85 (186)
T COG4186 76 -KHLVPGNHDK 85 (186)
T ss_pred -EEEeeCCCCC
Confidence 3789999995
No 101
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=96.91 E-value=0.0013 Score=58.96 Aligned_cols=64 Identities=20% Similarity=0.216 Sum_probs=39.4
Q ss_pred EEEEEecCCCCCCcHH-HHHHHH-HhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYM-QSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~-~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
|++++||+|....... .++.+. ..+.|.++++||++..+..+ .+..+.+. ...++.+.||||..
T Consensus 16 ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~--------~~~l~~l~----~~~~~~v~GNHE~~ 81 (218)
T PRK09968 16 HIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPES--------LNVLRLLN----QPWFISVKGNHEAM 81 (218)
T ss_pred eEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCH--------HHHHHHHh----hCCcEEEECchHHH
Confidence 8999999998643322 222222 12679999999999643221 12222222 22567899999963
No 102
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=96.88 E-value=0.0014 Score=58.81 Aligned_cols=67 Identities=22% Similarity=0.272 Sum_probs=39.5
Q ss_pred EEEEecCCCCCCcHH-HHHHHHHh--------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCC
Q 017284 164 FGIIGDLGQTYNSLS-TLKHYMQS--------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGN 234 (374)
Q Consensus 164 f~v~gD~~~~~~~~~-~l~~~~~~--------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GN 234 (374)
+.++||+|....... .++++... ..|.++++||++..+.. + .+..+.+..+...-.++.+.||
T Consensus 1 ~~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~-S-------~~vl~~l~~l~~~~~~~~l~GN 72 (222)
T cd07413 1 YDFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPE-I-------RELLEIVKSMVDAGHALAVMGN 72 (222)
T ss_pred CEEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCC-H-------HHHHHHHHHhhcCCCEEEEEcc
Confidence 357999998654322 22332111 25799999999964321 1 2233334333333468889999
Q ss_pred cccc
Q 017284 235 HEIE 238 (374)
Q Consensus 235 HD~~ 238 (374)
||..
T Consensus 73 HE~~ 76 (222)
T cd07413 73 HEFN 76 (222)
T ss_pred CcHH
Confidence 9964
No 103
>PF00041 fn3: Fibronectin type III domain; InterPro: IPR003961 Fibronectins are multi-domain glycoproteins found in a soluble form in plasma, and in an insoluble form in loose connective tissue and basement membranes []. They contain multiple copies of 3 repeat regions (types I, II and III), which bind to a variety of substances including heparin, collagen, DNA, actin, fibrin and fibronectin receptors on cell surfaces. The wide variety of these substances means that fibronectins are involved in a number of important functions: e.g., wound healing; cell adhesion; blood coagulation; cell differentiation and migration; maintenance of the cellular cytoskeleton; and tumour metastasis []. The role of fibronectin in cell differentiation is demonstrated by the marked reduction in the expression of its gene when neoplastic transformation occurs. Cell attachment has been found to be mediated by the binding of the tetrapeptide RGDS to integrins on the cell surface [], although related sequences can also display cell adhesion activity. Plasma fibronectin occurs as a dimer of 2 different subunits, linked together by 2 disulphide bonds near the C terminus. The difference in the 2 chains occurs in the type III repeat region and is caused by alternative splicing of the mRNA from one gene []. The observation that, in a given protein, an individual repeat of one of the 3 types (e.g., the first FnIII repeat) shows much less similarity to its subsequent tandem repeats within that protein than to its equivalent repeat between fibronectins from other species, has suggested that the repeating structure of fibronectin arose at an early stage of evolution. It also seems to suggest that the structure is subject to high selective pressure []. The fibronectin type III repeat region is an approximately 100 amino acid domain, different tandem repeats of which contain binding sites for DNA, heparin and the cell surface []. The superfamily of sequences believed to contain FnIII repeats represents 45 different families, the majority of which are involved in cell surface binding in some manner, or are receptor protein tyrosine kinases, or cytokine receptors.; GO: 0005515 protein binding; PDB: 1UEM_A 1TDQ_A 1X5I_A 2IC2_B 2IBG_C 2IBB_A 3R8Q_A 2FNB_A 1FNH_A 2EDB_A ....
Probab=96.84 E-value=0.005 Score=45.49 Aligned_cols=70 Identities=20% Similarity=0.385 Sum_probs=44.8
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
+|+.++++.-. .+++.|.|..+.... .-.|+|....+.. ....... ..-...++++||+|+|.|
T Consensus 2 ~P~~l~v~~~~--~~sv~v~W~~~~~~~~~~~~y~v~~~~~~~~~------~~~~~~~----~~~~~~~~i~~L~p~t~Y 69 (85)
T PF00041_consen 2 APENLSVSNIS--PTSVTVSWKPPSSGNGPITGYRVEYRSVNSTS------DWQEVTV----PGNETSYTITGLQPGTTY 69 (85)
T ss_dssp SSEEEEEEEEC--SSEEEEEEEESSSTSSSESEEEEEEEETTSSS------EEEEEEE----ETTSSEEEEESCCTTSEE
T ss_pred cCcCeEEEECC--CCEEEEEEECCCCCCCCeeEEEEEEEecccce------eeeeeee----eeeeeeeeeccCCCCCEE
Confidence 57788888654 589999999984221 2357776665432 0111110 111236789999999999
Q ss_pred EEEeCC
Q 017284 136 YYKIGD 141 (374)
Q Consensus 136 ~Y~v~~ 141 (374)
.++|..
T Consensus 70 ~~~v~a 75 (85)
T PF00041_consen 70 EFRVRA 75 (85)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999864
No 104
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=96.80 E-value=0.0017 Score=58.09 Aligned_cols=64 Identities=20% Similarity=0.196 Sum_probs=39.5
Q ss_pred EEEEEecCCCCCCcH-HHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSL-STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~-~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
|++++||+|...... ..++.+... +.|-++++||++..+..+ .+-.+.+. ...+..+.||||..
T Consensus 18 ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s--------~~vl~~l~----~~~~~~v~GNHE~~ 83 (218)
T PRK11439 18 HIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQS--------LRCLQLLE----EHWVRAVRGNHEQM 83 (218)
T ss_pred eEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCH--------HHHHHHHH----cCCceEeeCchHHH
Confidence 899999999865432 233333222 578999999999643211 12222222 23467899999964
No 105
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=96.63 E-value=0.003 Score=57.85 Aligned_cols=64 Identities=22% Similarity=0.282 Sum_probs=39.6
Q ss_pred EEEecCCCCCCcHH-HHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 165 GIIGDLGQTYNSLS-TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 165 ~v~gD~~~~~~~~~-~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.++||+|....... .++++... +.|.++++||++..+.. . .+..+++..+. ..+..+.||||..
T Consensus 2 yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~-----s---~evl~~l~~l~--~~v~~VlGNHD~~ 67 (257)
T cd07422 2 YAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPD-----S---LETLRFVKSLG--DSAKTVLGNHDLH 67 (257)
T ss_pred EEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcC-----H---HHHHHHHHhcC--CCeEEEcCCchHH
Confidence 47899998654322 23333222 57999999999964321 1 23334444332 3678999999974
No 106
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=96.59 E-value=0.0044 Score=57.36 Aligned_cols=68 Identities=18% Similarity=0.245 Sum_probs=41.0
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHh------CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC---CeEEcC
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQS------GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ---PWIWSA 232 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~~------~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~---P~~~v~ 232 (374)
++.++||+|....... .++.+.+. ..+.+|++||++..... . .+..+++..+.... .++.+.
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPd-----S---~eVld~L~~l~~~~~~~~vv~Lr 74 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPE-----T---RKVIDFLISLPEKHPKQRHVFLC 74 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCC-----H---HHHHHHHHHhhhcccccceEEEe
Confidence 6889999998754332 33444332 24689999999964321 1 22333333333222 478899
Q ss_pred CCcccc
Q 017284 233 GNHEIE 238 (374)
Q Consensus 233 GNHD~~ 238 (374)
||||..
T Consensus 75 GNHE~~ 80 (304)
T cd07421 75 GNHDFA 80 (304)
T ss_pred cCChHH
Confidence 999953
No 107
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=96.57 E-value=0.0039 Score=55.86 Aligned_cols=62 Identities=21% Similarity=0.241 Sum_probs=38.2
Q ss_pred EEecCCCCCCcHHHHHHHHH----hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhh-cCCeEEcCCCcccc
Q 017284 166 IIGDLGQTYNSLSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA-YQPWIWSAGNHEIE 238 (374)
Q Consensus 166 v~gD~~~~~~~~~~l~~~~~----~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~-~~P~~~v~GNHD~~ 238 (374)
++||+|.... .+.++.+ .+.|.+|++||++..... . .+..+.+..+.. ..+++.+.||||..
T Consensus 2 ~igDiHg~~~---~l~~~l~~~~~~~~d~li~lGD~vdrg~~-----~---~~~l~~l~~~~~~~~~~~~l~GNHe~~ 68 (225)
T cd00144 2 VIGDIHGCLD---DLLRLLEKIGFPPNDKLIFLGDYVDRGPD-----S---VEVIDLLLALKILPDNVILLRGNHEDM 68 (225)
T ss_pred EEeCCCCCHH---HHHHHHHHhCCCCCCEEEEECCEeCCCCC-----c---HHHHHHHHHhcCCCCcEEEEccCchhh
Confidence 6899997533 3333333 378999999999964321 1 222233332221 34799999999974
No 108
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=96.45 E-value=0.009 Score=53.43 Aligned_cols=73 Identities=22% Similarity=0.269 Sum_probs=46.6
Q ss_pred cEEEEEecCCCCCCc-----------------HHHHHHHHH-hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhh
Q 017284 162 YTFGIIGDLGQTYNS-----------------LSTLKHYMQ-SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSA 223 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~-----------------~~~l~~~~~-~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~ 223 (374)
-+.++++|.|.+... ...+.++.+ .+|+-+|.+||+--+-+... ...|+....+++.+.
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~~lIilGD~KH~~~~~~---~~e~~~~~~f~~~~~ 96 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPKRLIILGDLKHEFGKSL---RQEKEEVREFLELLD 96 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCCEEEEcCccccccCccc---cccHHHHHHHHHHhc
Confidence 378899999987431 112333333 39999999999986544211 334444445555443
Q ss_pred hcCCeEEcCCCcccc
Q 017284 224 AYQPWIWSAGNHEIE 238 (374)
Q Consensus 224 ~~~P~~~v~GNHD~~ 238 (374)
. .-|+++.||||-.
T Consensus 97 ~-~evi~i~GNHD~~ 110 (235)
T COG1407 97 E-REVIIIRGNHDNG 110 (235)
T ss_pred c-CcEEEEeccCCCc
Confidence 3 2599999999975
No 109
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=96.09 E-value=0.0087 Score=55.22 Aligned_cols=66 Identities=23% Similarity=0.312 Sum_probs=40.0
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+..++||+|....... .++++.-. +.|-++++||++..+... .+..+++..+. -.+..+.||||..
T Consensus 2 ~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~s--------levL~~l~~l~--~~~~~VlGNHD~~ 69 (279)
T TIGR00668 2 ATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGS--------LEVLRYVKSLG--DAVRLVLGNHDLH 69 (279)
T ss_pred cEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCH--------HHHHHHHHhcC--CCeEEEEChhHHH
Confidence 4678999998754332 33333322 568999999999643211 22333443332 1356899999973
No 110
>COG5555 Cytolysin, a secreted calcineurin-like phosphatase [Cell motility and secretion]
Probab=95.88 E-value=0.0081 Score=54.52 Aligned_cols=174 Identities=14% Similarity=0.139 Sum_probs=95.1
Q ss_pred CCeEEecccccccCCCCcccc--chhhHHHH-H---HHHHhhhcCCeEEcCCCcccccCCCCCC----cccccccccc--
Q 017284 188 GQSVLFLGDLSYADRYEYNDV--GIRWDSWG-R---FIEQSAAYQPWIWSAGNHEIEFMPNMGE----VIPFKSYLHR-- 255 (374)
Q Consensus 188 ~d~vl~~GD~~y~~~~~~~~~--~~~w~~~~-~---~~~~~~~~~P~~~v~GNHD~~~~~~~~~----~~~~~~y~~~-- 255 (374)
|--++..||++...+....+. ..+..+|. + .+.+....+|+++-.||||.+-+.-.-. .+....|...
T Consensus 127 plGlV~ggDitddgggq~~qprEg~ql~qf~~RYsq~vG~~h~H~PvYvGlgnhdldq~gpph~~DWyRrElrdyve~~H 206 (392)
T COG5555 127 PLGLVEGGDITDDGGGQSFQPREGNQLKQFELRYSQDVGNIHMHYPVYVGLGNHDLDQKGPPHSLDWYRRELRDYVENYH 206 (392)
T ss_pred ceeEEeecceeccCCCcccCccccchhhchHhhhccCCCCceeeeeeEeccCchhhcccCCCCchhHHHHHHHHHHHhhc
Confidence 445677789997665433221 11112221 1 1223345689999999999863210000 0000111111
Q ss_pred -----cccCcC-CCCCCCCceEEEecCCEEEEEEeCCCCC-CC-ChHHHHHHHHHHhhccCCCCCeEEEEecccc--eec
Q 017284 256 -----IATPYT-ASKSTNPLWYAIRRASAHIIVLSSYSPY-VK-YTPQWWWLREELKKVDREKTPWLIVLMHVPL--YSS 325 (374)
Q Consensus 256 -----f~~p~~-~~~~~~~~~ysf~~g~v~fi~Ldt~~~~-~~-~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~--y~~ 325 (374)
|..|.. ..-+....-||+++|++|.+-+-+...- .. ...-+-||+.+|.... +..+-++++.|.-+ +++
T Consensus 207 r~~vf~Kppvp~atYd~l~d~ySwdwgglhlvh~hrf~Gd~~~ga~sslpwlk~dl~~~a-adgrpv~LfqhyGwdtfst 285 (392)
T COG5555 207 RSDVFWKPPVPPATYDQLKDRYSWDWGGLHLVHYHRFIGDAEPGANSSLPWLKVDLIYSA-ADGRPVYLFQHYGWDTFST 285 (392)
T ss_pred CcCcccCCCCCcccccccchheeccccceeEEEEeeeccccCCCccccCcceeccceeec-cCCCceeehhhhCccceec
Confidence 111111 1112334568999999999887663210 11 1233579999998743 23344788888765 333
Q ss_pred CCCC--------CCC------CHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 326 NVVH--------YME------GESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 326 ~~~~--------~~~------~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
..+. .++ ....|..+...+.-|+|--.|.||.|....
T Consensus 286 eawdpAsrT~Dd~Gsgaphww~a~er~all~~lqGYNvvg~fhGhkhd~~m 336 (392)
T COG5555 286 EAWDPASRTLDDTGSGAPHWWPAPERGALLFFLQGYNVVGTFHGHKHDFNM 336 (392)
T ss_pred cccCchhcccccCCCCCCCCCCCCCcchHHHhhcCceeEEeccccccccce
Confidence 2221 001 134577888888899999999999998543
No 111
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=95.65 E-value=0.038 Score=54.55 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=32.7
Q ss_pred CCCcEEEEEecCCCCCC---------cHHHHHH---HHHh-CCCeEEecccccccCC
Q 017284 159 DAPYTFGIIGDLGQTYN---------SLSTLKH---YMQS-GGQSVLFLGDLSYADR 202 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~---------~~~~l~~---~~~~-~~d~vl~~GD~~y~~~ 202 (374)
...+||++..|.|.++. ++.++.. |++. ++|+||..||+.-++.
T Consensus 11 entirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDmiLlGGDLFHeNk 67 (646)
T KOG2310|consen 11 ENTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDMILLGGDLFHENK 67 (646)
T ss_pred ccceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcEEEecCcccccCC
Confidence 35799999999998753 3444443 3333 9999999999997654
No 112
>PF13277 YmdB: YmdB-like protein; PDB: 2CV9_B 2Z06_C.
Probab=95.61 E-value=0.37 Score=43.64 Aligned_cols=168 Identities=17% Similarity=0.183 Sum_probs=76.5
Q ss_pred EEecCCCCCCc---HHHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccccCC
Q 017284 166 IIGDLGQTYNS---LSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIEFMP 241 (374)
Q Consensus 166 v~gD~~~~~~~---~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~~~~ 241 (374)
++||.=....- ...|..+.+. ++||||..|.++-....-. . ..+.+++ ...+- ..+.|||=+...
T Consensus 2 fiGDIvG~~Gr~~v~~~Lp~L~~~~~~DfVIaNgENaa~G~Git---~---~~~~~L~---~~GvD-viT~GNH~wdkk- 70 (253)
T PF13277_consen 2 FIGDIVGKPGRRAVKEHLPELKEEYGIDFVIANGENAAGGFGIT---P---KIAEELF---KAGVD-VITMGNHIWDKK- 70 (253)
T ss_dssp EE-EBBCHHHHHHHHHHHHHHGG--G-SEEEEE-TTTTTTSS-----H---HHHHHHH---HHT-S-EEE--TTTTSST-
T ss_pred eEEecCCHHHHHHHHHHHHHHHhhcCCCEEEECCcccCCCCCCC---H---HHHHHHH---hcCCC-EEecCcccccCc-
Confidence 56776332211 1223444444 9999999999985432211 1 2222222 22344 348999987521
Q ss_pred CCCCcccccccccccccCcCCCC-CCCCceEEEecCCEEEEEEeCC--CCCCCChHHHHHHHHHHhhccCCCCCeEEEEe
Q 017284 242 NMGEVIPFKSYLHRIATPYTASK-STNPLWYAIRRASAHIIVLSSY--SPYVKYTPQWWWLREELKKVDREKTPWLIVLM 318 (374)
Q Consensus 242 ~~~~~~~~~~y~~~f~~p~~~~~-~~~~~~ysf~~g~v~fi~Ldt~--~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~ 318 (374)
+...+-.-..+.-.|.|-+. ..+.-|..++.++..+-+++-. .-.....--..-+++.|++. +.+++.+||=+
T Consensus 71 ---ei~~~i~~~~~ilRPaN~p~~~pG~G~~i~~~~g~kv~ViNl~Gr~fm~~~~~PF~~~d~~l~~l-~~~~~~iiVDF 146 (253)
T PF13277_consen 71 ---EIFDFIDKEPRILRPANYPPGTPGRGYRIFEKNGKKVAVINLMGRVFMPPIDCPFRAADRLLEEL-KEETDIIIVDF 146 (253)
T ss_dssp ---THHHHHHH-SSEE--TTS-TT-SSBSEEEEEETTEEEEEEEEE--TTS---S-HHHHHHHHHHH------SEEEEEE
T ss_pred ---HHHHHHhcCCCcEECCCCCCCCCcCcEEEEEECCEEEEEEECcccccCCCCCChHHHHHHHHHhc-cccCCEEEEEe
Confidence 11011011122234555333 3456788899988777666652 21111112233344444443 24778899999
Q ss_pred cccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccc
Q 017284 319 HVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAY 360 (374)
Q Consensus 319 H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~y 360 (374)
|.= ..... .-.-++-.-+|.+|+.-|+|.-
T Consensus 147 HAE-----------aTSEK-~A~g~~lDGrvsaV~GTHTHVq 176 (253)
T PF13277_consen 147 HAE-----------ATSEK-QAMGWYLDGRVSAVVGTHTHVQ 176 (253)
T ss_dssp E-S------------HHHH-HHHHHHHBTTBSEEEEESSSS-
T ss_pred ecC-----------cHHHH-HHHHHHhCCcEEEEEeCCCCcc
Confidence 942 11112 2234556778999999999984
No 113
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=95.38 E-value=0.028 Score=52.90 Aligned_cols=65 Identities=18% Similarity=0.266 Sum_probs=38.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCcc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHE 236 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNHD 236 (374)
+++++||+|..... +.++.+. ..+-++++||++..+... -+-...+..+.-.. -++.+.||||
T Consensus 44 ~i~ViGDIHG~~~d---L~~l~~~~g~~~~~~ylFLGDyVDRG~~s--------~Evi~lL~~lki~~p~~v~lLRGNHE 112 (305)
T cd07416 44 PVTVCGDIHGQFYD---LLKLFEVGGSPANTRYLFLGDYVDRGYFS--------IECVLYLWALKILYPKTLFLLRGNHE 112 (305)
T ss_pred CEEEEEeCCCCHHH---HHHHHHhcCCCCCceEEEECCccCCCCCh--------HHHHHHHHHHHhhcCCCEEEEeCCCc
Confidence 58899999976432 3323222 348899999999643210 12222233333333 4788999999
Q ss_pred cc
Q 017284 237 IE 238 (374)
Q Consensus 237 ~~ 238 (374)
..
T Consensus 113 ~~ 114 (305)
T cd07416 113 CR 114 (305)
T ss_pred HH
Confidence 75
No 114
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=95.37 E-value=0.03 Score=52.98 Aligned_cols=65 Identities=18% Similarity=0.095 Sum_probs=38.3
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh-----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS-----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~-----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNH 235 (374)
++.++||+|.... .+.++.+. .-+-+|++||++..+... -+-...+-.+.... -++.+.|||
T Consensus 52 ~~~vvGDiHG~~~---dL~~il~~~g~~~~~~~~lFLGDyVDRG~~s--------~Evl~ll~~lk~~~p~~v~llRGNH 120 (321)
T cd07420 52 QVTICGDLHGKLD---DLFLIFYKNGLPSPENPYVFNGDFVDRGKRS--------IEILIILFAFFLVYPNEVHLNRGNH 120 (321)
T ss_pred CeEEEEeCCCCHH---HHHHHHHHcCCCCccceEEEeccccCCCCCc--------HHHHHHHHHHhhcCCCcEEEecCch
Confidence 6789999998643 23333332 226799999999643221 11222222232222 378899999
Q ss_pred ccc
Q 017284 236 EIE 238 (374)
Q Consensus 236 D~~ 238 (374)
|..
T Consensus 121 E~~ 123 (321)
T cd07420 121 EDH 123 (321)
T ss_pred hhh
Confidence 975
No 115
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=95.15 E-value=0.1 Score=54.05 Aligned_cols=74 Identities=19% Similarity=0.355 Sum_probs=49.6
Q ss_pred CCCCceEEEEEcCCCCCCceEEEe----ecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeCC-----
Q 017284 71 YDGKAVIISWVTPNELGSNRVQYG----KLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIGD----- 141 (374)
Q Consensus 71 d~~~~~~v~W~t~~~~~~~~V~y~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~~----- 141 (374)
-..++++++|..++.+....++|- ++.. ...+|.. -..-...++++||+|||.|-+||..
T Consensus 454 ~~~~sitlsW~~p~~png~ildYEvky~ek~~--------~e~~~~~---~~t~~~~~ti~gL~p~t~YvfqVRarT~aG 522 (996)
T KOG0196|consen 454 RTSDSITLSWSEPDQPNGVILDYEVKYYEKDE--------DERSYST---LKTKTTTATITGLKPGTVYVFQVRARTAAG 522 (996)
T ss_pred eccCceEEecCCCCCCCCcceeEEEEEeeccc--------cccceeE---EecccceEEeeccCCCcEEEEEEEEecccC
Confidence 346899999999876665544443 3321 1111111 1113557899999999999999853
Q ss_pred -CCCCceEEEECCCC
Q 017284 142 -GDSSREFWFQTPPK 155 (374)
Q Consensus 142 -~~~s~~~~F~T~p~ 155 (374)
|..|....|.|.|.
T Consensus 523 ~G~~S~~~~fqT~~~ 537 (996)
T KOG0196|consen 523 YGPYSGKHEFQTLPS 537 (996)
T ss_pred CCCCCCceeeeecCc
Confidence 45788899999886
No 116
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=95.07 E-value=0.043 Score=50.80 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=38.8
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc--CCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY--QPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~--~P~~~v~GNHD~~ 238 (374)
+++++||+|....... .+..+.....+-++++||++..+... -+....+..+... --++.+.||||..
T Consensus 29 ~i~vvGDiHG~~~~l~~ll~~~~~~~~~~~vfLGD~VDrG~~s--------~e~l~~l~~lk~~~p~~v~llrGNHE~~ 99 (271)
T smart00156 29 PVTVCGDIHGQFDDLLRLFDLNGPPPDTNYVFLGDYVDRGPFS--------IEVILLLFALKILYPNRVVLLRGNHESR 99 (271)
T ss_pred CEEEEEeCcCCHHHHHHHHHHcCCCCCceEEEeCCccCCCCCh--------HHHHHHHHHHHhcCCCCEEEEeccccHH
Confidence 6889999997543221 22222112567899999999633211 1222222222222 2478899999984
No 117
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=95.06 E-value=0.8 Score=41.10 Aligned_cols=174 Identities=17% Similarity=0.213 Sum_probs=92.5
Q ss_pred cEEEEEecCCCCCCcH---HHHHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCccc
Q 017284 162 YTFGIIGDLGQTYNSL---STLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEI 237 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~---~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~ 237 (374)
+|++++||.=....-. +-|..+.+. ++||||..|-++-... .-.|+-+..+++. .+- +.+.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~------Git~k~y~~l~~~---G~d-viT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGF------GITEKIYKELLEA---GAD-VITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCc------CCCHHHHHHHHHh---CCC-EEecccccc
Confidence 5899999985543322 234445555 8999999999885432 2233444444332 233 459999987
Q ss_pred ccCCCCCCcccccccccccccCcCCCCC-CCCceEEEecCCEEEEEEeCCCC--CC-CChHHHHHHHHHHhhccCCCCCe
Q 017284 238 EFMPNMGEVIPFKSYLHRIATPYTASKS-TNPLWYAIRRASAHIIVLSSYSP--YV-KYTPQWWWLREELKKVDREKTPW 313 (374)
Q Consensus 238 ~~~~~~~~~~~~~~y~~~f~~p~~~~~~-~~~~~ysf~~g~v~fi~Ldt~~~--~~-~~~~Q~~WL~~~L~~~~~~~~~w 313 (374)
... + ...|-.-..++-.|.+-+.. .+..|+-|+..+..+.+.+-.-. .. ....-.+=+++.|.+.+ .+++.
T Consensus 71 d~~-e---i~~~i~~~~~ilRP~N~p~~~~G~G~~~f~~ng~ki~V~Nl~Grv~m~~~~d~PF~~~d~l~~~~~-~~~~~ 145 (266)
T COG1692 71 DQK-E---ILDFIDNADRILRPANYPDGTPGKGSRIFKINGKKLAVINLMGRVFMPPALDNPFKAADKLLDEIK-LGTDL 145 (266)
T ss_pred cch-H---HHHHhhcccceeccCCCCCCCCcceEEEEEeCCcEEEEEEeeccccCccccCCHHHHHHHHHHhCc-cCCce
Confidence 421 1 00111112233345543332 23456667776655555543211 11 01122333556666543 35678
Q ss_pred EEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccc
Q 017284 314 LIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYER 362 (374)
Q Consensus 314 ~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR 362 (374)
+||-+|.-.-+. ...| -++-+-+|.+|+.=|+|.-.-
T Consensus 146 iiVDFHAEtTSE-----------K~a~-g~yldGrvsavvGTHTHV~Ta 182 (266)
T COG1692 146 IIVDFHAETTSE-----------KNAF-GWYLDGRVSAVVGTHTHVPTA 182 (266)
T ss_pred EEEEccccchhh-----------hhhh-heEEcCeEEEEEeccCccccc
Confidence 999999532211 1111 233355789999999998543
No 118
>KOG4419 consensus 5' nucleotidase [Nucleotide transport and metabolism]
Probab=95.04 E-value=0.19 Score=50.45 Aligned_cols=55 Identities=18% Similarity=0.305 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHc-CCcE-EEEcCccc
Q 017284 294 PQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHS-RVDF-IFAGHVHA 359 (374)
Q Consensus 294 ~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~-~Vdl-vlsGH~H~ 359 (374)
.|.+|-.+.++. .+.+-+|++.|.|.-... +.+ ..+..+...+ ++++ ||.||.|.
T Consensus 212 ~~~~~~~~m~~~---~~idlii~lgH~~~~~~~-----e~~---~~~~~ir~~~p~t~IqviGGHshi 268 (602)
T KOG4419|consen 212 TQSEWEQDMVNT---TDIDLIIALGHSPVRDDD-----EWK---SLHAEIRKVHPNTPIQVIGGHSHI 268 (602)
T ss_pred hccchHHHHhhc---cCccEEEEecccccccch-----hhh---hHHHHHhhhCCCCceEEECchhhh
Confidence 567888887776 677888999998863211 111 1334444444 4778 99999998
No 119
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=94.71 E-value=0.049 Score=50.74 Aligned_cols=68 Identities=19% Similarity=0.186 Sum_probs=37.8
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhc--CCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAY--QPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~--~P~~~v~GNHD~~ 238 (374)
.+.++||+|....... .+........+-+|++||++..+.. . -+....+..+.-. -.++.+.||||..
T Consensus 43 ~i~vvGDIHG~~~dL~~ll~~~~~~~~~~~lfLGDyVDRG~~-----s---~evl~ll~~lk~~~p~~v~llrGNHE~~ 113 (285)
T cd07415 43 PVTVCGDIHGQFYDLLELFRVGGDPPDTNYLFLGDYVDRGYY-----S---VETFLLLLALKVRYPDRITLLRGNHESR 113 (285)
T ss_pred CEEEEEeCCCCHHHHHHHHHHcCCCCCCeEEEEeEECCCCcC-----H---HHHHHHHHHHhhcCCCcEEEEecccchH
Confidence 4888999997543221 2221111144678999999964321 1 1222222233222 3588999999974
No 120
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=94.65 E-value=0.055 Score=50.65 Aligned_cols=68 Identities=21% Similarity=0.175 Sum_probs=37.8
Q ss_pred EEEEEecCCCCCCcHH-HHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLS-TLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~-~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNHD~~ 238 (374)
.++++||+|....... .+........+-+|++||++..+... -+....+..+.-.. -++.+.||||..
T Consensus 51 ~i~viGDIHG~~~~L~~l~~~~~~~~~~~~lfLGDyVDRG~~s--------~e~i~ll~~lk~~~p~~i~llrGNHE~~ 121 (293)
T cd07414 51 PLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS--------LETICLLLAYKIKYPENFFLLRGNHECA 121 (293)
T ss_pred ceEEEEecCCCHHHHHHHHHhcCCCCcceEEEEeeEecCCCCc--------HHHHHHHHHhhhhCCCcEEEEecccchh
Confidence 5888999997543221 22221111456788999999643211 11222222222222 378899999984
No 121
>PF09587 PGA_cap: Bacterial capsule synthesis protein PGA_cap; InterPro: IPR019079 CapA is a putative poly-gamma-glutamate capsule biosynthesis protein found in bacteria. Poly-gamma-glutamate is a natural polymer that may be involved in virulence and may help bacteria survive in high salt concentrations. It is a surface-associated protein [].
Probab=94.57 E-value=0.12 Score=47.12 Aligned_cols=73 Identities=16% Similarity=0.222 Sum_probs=48.3
Q ss_pred HHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcccccccccccCCceecC
Q 017284 295 QWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMSFPFHFFY 374 (374)
Q Consensus 295 Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~~~~h~~~ 374 (374)
+.+.+++++++++ +++.++||++|--.-. ...-.+.++ .+...+.+.|+|+|+.+|.|..+-.. +++++-+||
T Consensus 169 ~~~~i~~~i~~~r-~~~D~vIv~~HwG~e~----~~~p~~~q~-~~a~~lidaGaDiIiG~HpHv~q~~E-~y~~~~I~Y 241 (250)
T PF09587_consen 169 GIERIKEDIREAR-KKADVVIVSLHWGIEY----ENYPTPEQR-ELARALIDAGADIIIGHHPHVIQPVE-IYKGKPIFY 241 (250)
T ss_pred hHHHHHHHHHHHh-cCCCEEEEEeccCCCC----CCCCCHHHH-HHHHHHHHcCCCEEEeCCCCcccceE-EECCEEEEE
Confidence 4588888888875 5789999999963211 111123333 45555556899999999999976543 456665554
No 122
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=94.45 E-value=0.064 Score=51.70 Aligned_cols=65 Identities=14% Similarity=0.118 Sum_probs=38.0
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh----CC-CeEEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS----GG-QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNH 235 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~----~~-d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNH 235 (374)
++.++||+|.... .+..+.+. .. +.+|++||++..+.. . -+....+..+.-.. -++.+.|||
T Consensus 67 ~i~VvGDIHG~~~---dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~-S-------lEvl~lL~~lki~~p~~v~lLRGNH 135 (377)
T cd07418 67 EVVVVGDVHGQLH---DVLFLLEDAGFPDQNRFYVFNGDYVDRGAW-G-------LETFLLLLSWKVLLPDRVYLLRGNH 135 (377)
T ss_pred CEEEEEecCCCHH---HHHHHHHHhCCCCCCceEEEeccccCCCCC-h-------HHHHHHHHHHhhccCCeEEEEeeec
Confidence 6899999998643 33333332 22 458999999953321 1 12222222332222 378899999
Q ss_pred ccc
Q 017284 236 EIE 238 (374)
Q Consensus 236 D~~ 238 (374)
|..
T Consensus 136 E~~ 138 (377)
T cd07418 136 ESK 138 (377)
T ss_pred ccc
Confidence 975
No 123
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=94.23 E-value=0.077 Score=49.86 Aligned_cols=65 Identities=17% Similarity=0.252 Sum_probs=37.9
Q ss_pred EEEEEecCCCCCCcHHHHHHHHH----hCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCC--eEEcCCCcc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQ----SGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP--WIWSAGNHE 236 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~----~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P--~~~v~GNHD 236 (374)
.+.++||+|.... .+.++.+ ...+-+|++||++..+.. . -+....+-.+.-..| ++.+.||||
T Consensus 44 ~i~vvGDIHG~~~---~L~~l~~~~~~~~~~~~lfLGDyVDRG~~-----s---~evl~ll~~lk~~~p~~v~llrGNHE 112 (303)
T PTZ00239 44 PVNVCGDIHGQFY---DLQALFKEGGDIPNANYIFIGDFVDRGYN-----S---VETMEYLLCLKVKYPGNITLLRGNHE 112 (303)
T ss_pred CEEEEEeCCCCHH---HHHHHHHhcCCCCCceEEEeeeEcCCCCC-----H---HHHHHHHHHhhhcCCCcEEEEecccc
Confidence 3788999997543 2333322 245678999999964321 1 112222222322333 788999999
Q ss_pred cc
Q 017284 237 IE 238 (374)
Q Consensus 237 ~~ 238 (374)
..
T Consensus 113 ~~ 114 (303)
T PTZ00239 113 SR 114 (303)
T ss_pred hH
Confidence 74
No 124
>cd00063 FN3 Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Probab=94.15 E-value=0.44 Score=34.50 Aligned_cols=69 Identities=20% Similarity=0.370 Sum_probs=38.0
Q ss_pred CceEEEEeeCCCCCceEEEEEcCCCCC----CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEE
Q 017284 61 PQQVRITQGDYDGKAVIISWVTPNELG----SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYY 136 (374)
Q Consensus 61 p~~v~lt~~~d~~~~~~v~W~t~~~~~----~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~ 136 (374)
|..+.+.... ..++.|.|....... .-.|+|........ ..+.. ...-..++.+.+|.|++.|.
T Consensus 4 p~~~~~~~~~--~~~~~v~W~~~~~~~~~~~~y~v~~~~~~~~~~-------~~~~~---~~~~~~~~~i~~l~p~~~Y~ 71 (93)
T cd00063 4 PTNLRVTDVT--STSVTLSWTPPEDDGGPITGYVVEYREKGSGDW-------KEVEV---TPGSETSYTLTGLKPGTEYE 71 (93)
T ss_pred CCCcEEEEec--CCEEEEEECCCCCCCCcceeEEEEEeeCCCCCC-------EEeec---cCCcccEEEEccccCCCEEE
Confidence 4445444333 478999998864321 12344444321111 11110 11245677899999999999
Q ss_pred EEeCC
Q 017284 137 YKIGD 141 (374)
Q Consensus 137 Y~v~~ 141 (374)
++|..
T Consensus 72 ~~v~a 76 (93)
T cd00063 72 FRVRA 76 (93)
T ss_pred EEEEE
Confidence 99853
No 125
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=93.92 E-value=0.094 Score=49.58 Aligned_cols=23 Identities=13% Similarity=0.353 Sum_probs=19.9
Q ss_pred HHHHHHHHHHcCCcEEEEcCccc
Q 017284 337 RAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
.+.+...+++++.++++=||.-.
T Consensus 231 ~~~~~~Fl~~n~l~~IiR~Hq~v 253 (320)
T PTZ00480 231 QEIVQVFLKKHELDLICRAHQVV 253 (320)
T ss_pred HHHHHHHHHhCCCcEEEEcCccc
Confidence 46778889999999999999855
No 126
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=93.77 E-value=0.22 Score=48.91 Aligned_cols=80 Identities=14% Similarity=0.234 Sum_probs=52.3
Q ss_pred CCCcEEEEEecCCCCCCcH--HHHHHHHHh---------CCCeEEecccccccCCCCcc--------ccchhhHHHHHHH
Q 017284 159 DAPYTFGIIGDLGQTYNSL--STLKHYMQS---------GGQSVLFLGDLSYADRYEYN--------DVGIRWDSWGRFI 219 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~~--~~l~~~~~~---------~~d~vl~~GD~~y~~~~~~~--------~~~~~w~~~~~~~ 219 (374)
...++.++++|.|.+...+ ..+....+. +..+++.+||.+..-+...+ +...+++++.+++
T Consensus 223 ~e~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L 302 (481)
T COG1311 223 DERVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFL 302 (481)
T ss_pred CcceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHH
Confidence 3578899999999875322 112222221 34789999999974332111 2234566666777
Q ss_pred HHhhhcCCeEEcCCCcccc
Q 017284 220 EQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 220 ~~~~~~~P~~~v~GNHD~~ 238 (374)
..+-..+-++..|||||..
T Consensus 303 ~~vp~~I~v~i~PGnhDa~ 321 (481)
T COG1311 303 DQVPEHIKVFIMPGNHDAV 321 (481)
T ss_pred hhCCCCceEEEecCCCCcc
Confidence 7777778899999999974
No 127
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=93.32 E-value=0.13 Score=48.58 Aligned_cols=23 Identities=13% Similarity=0.326 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCCcEEEEcCccc
Q 017284 337 RAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
.+.+...+++.+.++++-||.=.
T Consensus 233 ~~~~~~Fl~~n~l~~iiR~He~~ 255 (316)
T cd07417 233 PDVTKRFLEENNLEYIIRSHEVK 255 (316)
T ss_pred HHHHHHHHHHcCCcEEEECCccc
Confidence 45777889999999999999854
No 128
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=93.18 E-value=0.099 Score=48.94 Aligned_cols=23 Identities=13% Similarity=0.275 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCcEEEEcCccc
Q 017284 337 RAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
.+.+...+++.+.++++=||.-.
T Consensus 224 ~~~~~~Fl~~n~l~~iiR~Hq~~ 246 (294)
T PTZ00244 224 EDIVNDFLDMVDMDLIVRAHQVM 246 (294)
T ss_pred HHHHHHHHHHcCCcEEEEcCccc
Confidence 45778889999999999999854
No 129
>smart00060 FN3 Fibronectin type 3 domain. One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Probab=93.09 E-value=0.88 Score=31.79 Aligned_cols=69 Identities=17% Similarity=0.284 Sum_probs=38.6
Q ss_pred eEEEEeeCCCCCceEEEEEcCCCCC--CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeC
Q 017284 63 QVRITQGDYDGKAVIISWVTPNELG--SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG 140 (374)
Q Consensus 63 ~v~lt~~~d~~~~~~v~W~t~~~~~--~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~ 140 (374)
.+++.... .+++.|+|..+.... .-.++|........ ....... .........+.+|+|+++|.++|.
T Consensus 6 ~~~~~~~~--~~~~~v~W~~~~~~~~~~y~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~i~~L~~~~~Y~v~v~ 75 (83)
T smart00060 6 NLRVTDVT--STSVTLSWEPPPDDGITGYIVGYRVEYREEG----SSWKEVN----VTPSSTSYTLTGLKPGTEYEFRVR 75 (83)
T ss_pred cEEEEEEe--CCEEEEEECCCCCCCCCccEEEEEEEEecCC----CccEEEE----ecCCccEEEEeCcCCCCEEEEEEE
Confidence 35555444 248999998553221 23566655433211 0001110 011146788999999999999985
Q ss_pred C
Q 017284 141 D 141 (374)
Q Consensus 141 ~ 141 (374)
.
T Consensus 76 a 76 (83)
T smart00060 76 A 76 (83)
T ss_pred E
Confidence 4
No 130
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=93.01 E-value=0.2 Score=47.38 Aligned_cols=21 Identities=10% Similarity=0.241 Sum_probs=18.9
Q ss_pred HHHHHHHHHHcCCcEEEEcCc
Q 017284 337 RAVFESWFVHSRVDFIFAGHV 357 (374)
Q Consensus 337 r~~l~~ll~~~~VdlvlsGH~ 357 (374)
.+.+...+++.+.++++=||.
T Consensus 242 ~~~~~~Fl~~n~l~~iiRgHe 262 (311)
T cd07419 242 PDRVHRFLEENDLQMIIRAHE 262 (311)
T ss_pred HHHHHHHHHHCCCeEEEEech
Confidence 467888999999999999998
No 131
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=88.19 E-value=1.3 Score=48.19 Aligned_cols=80 Identities=25% Similarity=0.472 Sum_probs=47.1
Q ss_pred CCceEEEEeeCCCCCceEEEEEcCCCCCC--c----eEEEeecCCCCC---ceEEeEEEEEEeecccccEEEEEEeCCCC
Q 017284 60 APQQVRITQGDYDGKAVIISWVTPNELGS--N----RVQYGKLEKKYD---SSAEGTVTNYTFYKYKSGYIHHCLVDDLE 130 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~~~~~~--~----~V~y~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~v~l~gL~ 130 (374)
.|+.|.+-... +++++|.|..+.+... . .++|+..+.... ..+.|. ...-.+++|+
T Consensus 618 PP~Nl~lev~s--StsVrVsW~pP~~~t~ng~itgYkIRy~~~~~~~~~~~t~v~~n-------------~~~~l~~~Le 682 (1381)
T KOG4221|consen 618 PPQNLSLEVVS--STSVRVSWLPPPSETQNGQITGYKIRYRKLSREDEVNETVVKGN-------------TTQYLFNGLE 682 (1381)
T ss_pred CCcceEEEecC--CCeEEEEccCCCcccccceEEEEEEEecccCcccccceeecccc-------------hhhhHhhcCC
Confidence 45557776654 7999999999853221 1 234444332211 111111 1112467899
Q ss_pred CCCEEEEEeCC------CCCCceEEEECCC
Q 017284 131 YDTKYYYKIGD------GDSSREFWFQTPP 154 (374)
Q Consensus 131 p~t~Y~Y~v~~------~~~s~~~~F~T~p 154 (374)
|+|.|.+||.. |..|.+.++.|+-
T Consensus 683 p~T~Y~vrIsa~t~nGtGpaS~w~~aeT~~ 712 (1381)
T KOG4221|consen 683 PNTQYRVRISAMTVNGTGPASEWVSAETPE 712 (1381)
T ss_pred CCceEEEEEEEeccCCCCCcccceeccCcc
Confidence 99999999843 3456777888763
No 132
>KOG4221 consensus Receptor mediating netrin-dependent axon guidance [Signal transduction mechanisms]
Probab=85.77 E-value=3.3 Score=45.25 Aligned_cols=80 Identities=16% Similarity=0.211 Sum_probs=46.9
Q ss_pred EEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEEEeC-----
Q 017284 66 ITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG----- 140 (374)
Q Consensus 66 lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~----- 140 (374)
+..+.-...++.|.|..+.-.+.....|..--.... .|....+ +.-.++.+|.||+|.|.|.|||.
T Consensus 527 ~~a~ats~~ti~v~WepP~~~n~~I~~yk~~ys~~~---~~~~~~~------~~n~~e~ti~gL~k~TeY~~~vvA~N~~ 597 (1381)
T KOG4221|consen 527 LQAYATSPTTILVTWEPPPFGNGPITGYKLFYSEDD---TGKELRV------ENNATEYTINGLEKYTEYSIRVVAYNSA 597 (1381)
T ss_pred ccccccCcceEEEEecCCCCCCCCceEEEEEEEcCC---CCceEEE------ecCccEEEeecCCCccceEEEEEEecCC
Confidence 443333468899999998644444444443211000 1111111 11345567889999999999984
Q ss_pred -CCCCCceEEEECCC
Q 017284 141 -DGDSSREFWFQTPP 154 (374)
Q Consensus 141 -~~~~s~~~~F~T~p 154 (374)
.+..|...+++|+.
T Consensus 598 G~g~sS~~i~V~Tls 612 (1381)
T KOG4221|consen 598 GSGVSSADITVRTLS 612 (1381)
T ss_pred CCCCCCCceEEEecc
Confidence 34567778888863
No 133
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=82.89 E-value=2.7 Score=38.46 Aligned_cols=64 Identities=22% Similarity=0.190 Sum_probs=40.4
Q ss_pred CCcEEEEEecCCCCCCcHHHHHHHHHh-CCCeEEecccccccCCCCccccchhh-HHHHHHHHHhhhcCCe---EEcCCC
Q 017284 160 APYTFGIIGDLGQTYNSLSTLKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRW-DSWGRFIEQSAAYQPW---IWSAGN 234 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~~~~l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w-~~~~~~~~~~~~~~P~---~~v~GN 234 (374)
...||+.++|.|.-... +... +-|+++++||.+.-. ..+| ..|.+ ...+.|. +++.||
T Consensus 60 ~~~r~VcisdtH~~~~~------i~~~p~gDvlihagdfT~~g-------~~~ev~~fn~----~~gslph~yKIVIaGN 122 (305)
T KOG3947|consen 60 GYARFVCISDTHELTFD------INDIPDGDVLIHAGDFTNLG-------LPEEVIKFNE----WLGSLPHEYKIVIAGN 122 (305)
T ss_pred CceEEEEecCcccccCc------cccCCCCceEEeccCCcccc-------CHHHHHhhhH----HhccCcceeeEEEeec
Confidence 46799999999875332 2222 779999999999522 2222 22222 2233342 679999
Q ss_pred cccccC
Q 017284 235 HEIEFM 240 (374)
Q Consensus 235 HD~~~~ 240 (374)
||...+
T Consensus 123 HELtFd 128 (305)
T KOG3947|consen 123 HELTFD 128 (305)
T ss_pred cceeec
Confidence 999754
No 134
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=82.75 E-value=1 Score=39.75 Aligned_cols=77 Identities=10% Similarity=0.104 Sum_probs=39.5
Q ss_pred EEEEecCCCCCCc--HHHHHHHH-----HhCCCeEEecccccccCCCCcc------ccchhhH---HHHHHHHHhhhcCC
Q 017284 164 FGIIGDLGQTYNS--LSTLKHYM-----QSGGQSVLFLGDLSYADRYEYN------DVGIRWD---SWGRFIEQSAAYQP 227 (374)
Q Consensus 164 f~v~gD~~~~~~~--~~~l~~~~-----~~~~d~vl~~GD~~y~~~~~~~------~~~~~w~---~~~~~~~~~~~~~P 227 (374)
|++++|.+.+.+. .+.+..+. +.+|+.+|++|+++........ ......+ .+.+.+..+...++
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPDVLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPSTQ 80 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTECEEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCSE
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCcEEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhcccccE
Confidence 5778888887442 33444443 2369999999999974332110 0010011 11222334456789
Q ss_pred eEEcCCCcccccC
Q 017284 228 WIWSAGNHEIEFM 240 (374)
Q Consensus 228 ~~~v~GNHD~~~~ 240 (374)
++.+||+||....
T Consensus 81 vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 81 VVLVPGPNDPTSS 93 (209)
T ss_dssp EEEE--TTCTT-S
T ss_pred EEEeCCCcccccc
Confidence 9999999998643
No 135
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=82.05 E-value=6.2 Score=42.89 Aligned_cols=71 Identities=24% Similarity=0.341 Sum_probs=45.6
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCC----CCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNE----LGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTK 134 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~----~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~ 134 (374)
.+|+.+.+...+ .+++.|.|..... ...-.|+|+...++.. ...... ..+-.-.+.|+||+|+|.
T Consensus 821 ~ap~~~~~~~~s--~s~~~v~W~~~~~~nG~l~gY~v~Y~~~~~~~~-----~~~~~~----i~~~~~~~~ltgL~~~T~ 889 (1051)
T KOG3513|consen 821 VAPTKLSAKPLS--SSEVNLSWKPPLWDNGKLTGYEVKYWKINEKEG-----SLSRVQ----IAGNRTSWRLTGLEPNTK 889 (1051)
T ss_pred CCCccceeeccc--CceEEEEecCcCccCCccceeEEEEEEcCCCcc-----ccccee----ecCCcceEeeeCCCCCce
Confidence 567777776554 5889999955422 1234688988876531 111110 012334568999999999
Q ss_pred EEEEeC
Q 017284 135 YYYKIG 140 (374)
Q Consensus 135 Y~Y~v~ 140 (374)
|+..+.
T Consensus 890 Y~~~vr 895 (1051)
T KOG3513|consen 890 YRFYVR 895 (1051)
T ss_pred EEEEEE
Confidence 999985
No 136
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=72.55 E-value=12 Score=35.09 Aligned_cols=17 Identities=29% Similarity=0.659 Sum_probs=14.7
Q ss_pred EEEeCCCCCCCEEEEEe
Q 017284 123 HCLVDDLEYDTKYYYKI 139 (374)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v 139 (374)
+.+|.+|+|+|+||+-|
T Consensus 16 ~~t~~~L~p~t~YyfdV 32 (300)
T PF10179_consen 16 NQTLSGLKPDTTYYFDV 32 (300)
T ss_pred eEEeccCCCCCeEEEEE
Confidence 45788999999999997
No 137
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=71.73 E-value=6.1 Score=35.63 Aligned_cols=64 Identities=20% Similarity=0.281 Sum_probs=34.5
Q ss_pred EEEEecCCCCCCcHHHHHHHHHh----CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCC--eEEcCCCccc
Q 017284 164 FGIIGDLGQTYNSLSTLKHYMQS----GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP--WIWSAGNHEI 237 (374)
Q Consensus 164 f~v~gD~~~~~~~~~~l~~~~~~----~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P--~~~v~GNHD~ 237 (374)
+.+.||+|.... .. -.+-+. .-.--|++||++..+-+ .-+.|.- +-.++...| +..+.||||.
T Consensus 45 vtvcGDIHGQf~--Dl-lelf~igG~~~~t~YLFLGDyVDRG~~-------SvEt~lL-Ll~lK~rYP~ritLiRGNHEs 113 (303)
T KOG0372|consen 45 VTVCGDIHGQFY--DL-LELFRIGGDVPETNYLFLGDYVDRGYY-------SVETFLL-LLALKVRYPDRITLIRGNHES 113 (303)
T ss_pred cEEeecccchHH--HH-HHHHHhCCCCCCCceEeecchhccccc-------hHHHHHH-HHHHhhcCcceeEEeeccchh
Confidence 446799987532 22 223232 22346889999964322 1133322 222333333 6779999997
Q ss_pred c
Q 017284 238 E 238 (374)
Q Consensus 238 ~ 238 (374)
.
T Consensus 114 R 114 (303)
T KOG0372|consen 114 R 114 (303)
T ss_pred h
Confidence 5
No 138
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=71.63 E-value=15 Score=39.01 Aligned_cols=111 Identities=15% Similarity=0.168 Sum_probs=69.5
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC-----CceEEEeecCCCCCc-----eEEeEEEEEEe------ecccccEEE
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG-----SNRVQYGKLEKKYDS-----SAEGTVTNYTF------YKYKSGYIH 122 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~-----~~~V~y~~~~~~~~~-----~~~g~~~~~~~------~~~~~~~~~ 122 (374)
..+.-++++......+++.++|..-..+. .-.+.|...+..... .+=|. ..+.. ....+.-.|
T Consensus 487 Ce~~~l~~~~~~~~~dsi~lrW~~~~~~d~r~llg~~~~yKEaP~qNvT~~dg~~aCg~-~~W~~~~v~~~~~~p~~~~~ 565 (1025)
T KOG4258|consen 487 CEDLVLQFSSTVTSADSILLRWERYQPPDMRDLLGFLLHYKEAPFQNVTEEDGRDACGS-NSWNVVDVDPPDLIPNDGTH 565 (1025)
T ss_pred cccceeeeeeEEeecceeEEEecccCCcchhhhheeeEeeccCCccccceecCcccccc-CcceEEeccCCcCCCccccc
Confidence 56777888877666899999999875431 235677777642111 11111 11111 011122344
Q ss_pred -EEEeCCCCCCCEEEEEeCCC----------CCCceEEEECCCCCCCCCCcEEEEEecCC
Q 017284 123 -HCLVDDLEYDTKYYYKIGDG----------DSSREFWFQTPPKIHPDAPYTFGIIGDLG 171 (374)
Q Consensus 123 -~v~l~gL~p~t~Y~Y~v~~~----------~~s~~~~F~T~p~~~~~~~~~f~v~gD~~ 171 (374)
-..+.||+|.|.|-|-|..- ..|+++.++|.|.. ++-++..+.-++..
T Consensus 566 ~~~~l~~LkP~TqYAvfVkT~t~t~~~~~~~A~S~I~YvqT~~~~-PspPl~~ls~snsS 624 (1025)
T KOG4258|consen 566 PGFLLDGLKPWTQYAVFVKTLTVTEAHEAYEAKSKIGYVQTLPDI-PSPPLDVLSKSNSS 624 (1025)
T ss_pred cceehhcCCccceeEEEEeeeehhhhccccccccceEEEEecCCC-CCCcchhhhccCcc
Confidence 78899999999999998531 46899999998854 34567766666654
No 139
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=65.32 E-value=40 Score=31.40 Aligned_cols=77 Identities=12% Similarity=0.055 Sum_probs=44.4
Q ss_pred CCcEEEEEecCCCCCCcHHHHHHHHH---h---------CCCeEEecccccccCC---CCccc-cchhhHHHHHH-H---
Q 017284 160 APYTFGIIGDLGQTYNSLSTLKHYMQ---S---------GGQSVLFLGDLSYADR---YEYND-VGIRWDSWGRF-I--- 219 (374)
Q Consensus 160 ~~~~f~v~gD~~~~~~~~~~l~~~~~---~---------~~d~vl~~GD~~y~~~---~~~~~-~~~~w~~~~~~-~--- 219 (374)
...+|+++||.+.... .+++++.+ . -|-.+|++|+.+...- ..... +.+..+.+... +
T Consensus 26 ~~~~~VilSDV~LD~p--~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~f 103 (291)
T PTZ00235 26 KRHNWIIMHDVYLDSP--YTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKF 103 (291)
T ss_pred CceEEEEEEeeccCCH--HHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhC
Confidence 4678999999998643 33333322 1 2889999999985421 00000 12222333221 1
Q ss_pred HHhhhcCCeEEcCCCcccc
Q 017284 220 EQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 220 ~~~~~~~P~~~v~GNHD~~ 238 (374)
..+.++.-++.|||..|-.
T Consensus 104 p~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 104 KLILEHCYLIFIPGINDPC 122 (291)
T ss_pred hHHHhcCeEEEECCCCCCC
Confidence 1244566789999999974
No 140
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=64.65 E-value=6 Score=37.70 Aligned_cols=66 Identities=18% Similarity=0.272 Sum_probs=36.2
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh---CCC-eEEecccccccCCCCccccchhhHHHHHHHHHhhh--cCCeEEcCCCcc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS---GGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAA--YQPWIWSAGNHE 236 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~---~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~--~~P~~~v~GNHD 236 (374)
-+.++||+|.... ..+.-+... .|+ -.+++||+++.+...- +.. -.+-.+.. .--++...||||
T Consensus 60 PV~i~GDiHGq~~--DLlrlf~~~g~~pp~~~ylFLGDYVDRG~~sl-------E~i-~LL~a~Ki~yp~~~~lLRGNHE 129 (331)
T KOG0374|consen 60 PVKIVGDIHGQFG--DLLRLFDLLGSFPPDQNYVFLGDYVDRGKQSL-------ETI-CLLFALKIKYPENVFLLRGNHE 129 (331)
T ss_pred CEEEEccCcCCHH--HHHHHHHhcCCCCCcccEEEecccccCCccce-------EEe-ehhhhhhhhCCceEEEeccccc
Confidence 4667899998654 223322222 254 5789999996443210 110 01111111 234889999999
Q ss_pred cc
Q 017284 237 IE 238 (374)
Q Consensus 237 ~~ 238 (374)
..
T Consensus 130 ~~ 131 (331)
T KOG0374|consen 130 CA 131 (331)
T ss_pred cc
Confidence 85
No 141
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=63.42 E-value=10 Score=34.53 Aligned_cols=67 Identities=19% Similarity=0.195 Sum_probs=35.3
Q ss_pred EEEEecCCCCCCcHHHHHHHHHhCCCe-EEecccccccCCCCccccchhhHHHHHHHHHhhhcC--CeEEcCCCcccc
Q 017284 164 FGIIGDLGQTYNSLSTLKHYMQSGGQS-VLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQ--PWIWSAGNHEIE 238 (374)
Q Consensus 164 f~v~gD~~~~~~~~~~l~~~~~~~~d~-vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~--P~~~v~GNHD~~ 238 (374)
..+.||.|......-.+-++....||. .|++||++..+.+. ++--..+-.+.-.. -+-.+.||||..
T Consensus 62 vtvcGDvHGqf~dl~ELfkiGG~~pdtnylfmGDyvdrGy~S--------vetVS~lva~Kvry~~rvtilrGNHEsr 131 (319)
T KOG0371|consen 62 VTVCGDVHGQFHDLIELFKIGGLAPDTNYLFMGDYVDRGYYS--------VETVSLLVALKVRYPDRVTILRGNHESR 131 (319)
T ss_pred eEEecCcchhHHHHHHHHHccCCCCCcceeeeeeecccccch--------HHHHHHHHHhhccccceeEEecCchHHH
Confidence 556799987643222222232235553 67899999643221 22222222222222 355689999974
No 142
>COG2248 Predicted hydrolase (metallo-beta-lactamase superfamily) [General function prediction only]
Probab=61.46 E-value=25 Score=32.06 Aligned_cols=77 Identities=13% Similarity=0.100 Sum_probs=50.6
Q ss_pred CCCcEEEEEecCCCCCCcHHHHHHHHHhCCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 159 DAPYTFGIIGDLGQTYNSLSTLKHYMQSGGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 159 ~~~~~f~v~gD~~~~~~~~~~l~~~~~~~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+...+|++.+|.+...+ ...++.+.+.+|+.+|+.|=.+|-.++... ....+.-.+-++.+....+--.+.+-|=..
T Consensus 174 dg~~~i~faSDvqGp~~-~~~l~~i~e~~P~v~ii~GPpty~lg~r~~--~~~~E~~irNl~~ii~~~~~~lViDHHllR 250 (304)
T COG2248 174 DGKSSIVFASDVQGPIN-DEALEFILEKRPDVLIIGGPPTYLLGYRVG--PKSLEKGIRNLERIIEETNATLVIDHHLLR 250 (304)
T ss_pred cCCeEEEEcccccCCCc-cHHHHHHHhcCCCEEEecCCchhHhhhhcC--hHHHHHHHHHHHHHHHhCcceEEEeehhhc
Confidence 35679999999987643 467888888899999999999976554321 111122234455555555555566666553
No 143
>PRK10301 hypothetical protein; Provisional
Probab=60.17 E-value=89 Score=25.11 Aligned_cols=22 Identities=9% Similarity=-0.035 Sum_probs=14.6
Q ss_pred EEEEEEeC-CCCCCC-EEEEEeCC
Q 017284 120 YIHHCLVD-DLEYDT-KYYYKIGD 141 (374)
Q Consensus 120 ~~~~v~l~-gL~p~t-~Y~Y~v~~ 141 (374)
....+.+. +|.||+ +-.||+-+
T Consensus 86 ~~~~v~l~~~L~~G~YtV~Wrvvs 109 (124)
T PRK10301 86 KQLIVPLADSLKPGTYTVDWHVVS 109 (124)
T ss_pred cEEEEECCCCCCCccEEEEEEEEe
Confidence 45577785 699996 45666543
No 144
>PF01108 Tissue_fac: Tissue factor; PDB: 3OG4_B 3OG6_B 1FYH_E 1FG9_D 1JRH_I 3DGC_R 3DLQ_R 1LQS_R 1Y6M_R 1J7V_R ....
Probab=59.03 E-value=69 Score=24.67 Aligned_cols=71 Identities=21% Similarity=0.261 Sum_probs=43.1
Q ss_pred CCCceEEEEeeCCCCCceEEEEEcCCCCC---CceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCC--CCC
Q 017284 59 NAPQQVRITQGDYDGKAVIISWVTPNELG---SNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLE--YDT 133 (374)
Q Consensus 59 ~~p~~v~lt~~~d~~~~~~v~W~t~~~~~---~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~--p~t 133 (374)
.+|+.|.+.... -..++.|.-..... .-.|+|....+..+..+.+-... ...++.|+... +..
T Consensus 23 p~P~nv~~~s~n---f~~iL~W~~~~~~~~~~~ytVq~~~~~~~~W~~v~~C~~i---------~~~~Cdlt~~~~~~~~ 90 (107)
T PF01108_consen 23 PAPQNVTVDSVN---FKHILRWDPGPGSPPNVTYTVQYKKYGSSSWKDVPGCQNI---------TETSCDLTDETSDPSE 90 (107)
T ss_dssp SSCEEEEEEEET---TEEEEEEEESTTSSSTEEEEEEEEESSTSCEEEECCEEEE---------SSSEEECTTCCTTTTS
T ss_pred CCCCeeEEEEEC---CceEEEeCCCCCCCCCeEEEEEEEecCCcceeeccceecc---------cccceeCcchhhcCcC
Confidence 357778887664 46899999843222 23688885444444444332111 12466777744 788
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|+.||..
T Consensus 91 ~Y~~rV~A 98 (107)
T PF01108_consen 91 SYYARVRA 98 (107)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEE
Confidence 99999865
No 145
>KOG3513 consensus Neural cell adhesion molecule L1 [Signal transduction mechanisms]
Probab=56.38 E-value=66 Score=35.36 Aligned_cols=75 Identities=16% Similarity=0.163 Sum_probs=47.2
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecC----CCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCC
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLE----KKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDT 133 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t 133 (374)
+..|.+|++.--. .+++.++|.......++...|.... ...|..+. +.. ....+- +.+++-+|.|-.
T Consensus 615 PgpP~~v~~~~i~--~t~~~lsW~~g~dn~SpI~~Y~iq~rt~~~~~W~~v~-~vp-----~~~~~~-~sa~vv~L~Pwv 685 (1051)
T KOG3513|consen 615 PGPPPDVHVDDIS--DTTARLSWSPGSDNNSPIEKYTIQFRTPFPGKWKAVT-TVP-----GNITGD-ESATVVNLSPWV 685 (1051)
T ss_pred CCCCCceeEeeec--cceEEEEeecCCCCCCCceEEeEEecCCCCCcceEee-ECC-----CcccCc-cceeEEccCCCc
Confidence 3567788886444 4789999998865545555555432 22333332 211 112223 568899999999
Q ss_pred EEEEEeCC
Q 017284 134 KYYYKIGD 141 (374)
Q Consensus 134 ~Y~Y~v~~ 141 (374)
.|.+||..
T Consensus 686 ~YeFRV~A 693 (1051)
T KOG3513|consen 686 EYEFRVVA 693 (1051)
T ss_pred ceEEEEEE
Confidence 99999853
No 146
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=55.41 E-value=12 Score=31.08 Aligned_cols=25 Identities=24% Similarity=0.422 Sum_probs=20.3
Q ss_pred HHHHHHHHcCCcEEEEcCccccccc
Q 017284 339 VFESWFVHSRVDFIFAGHVHAYERS 363 (374)
Q Consensus 339 ~l~~ll~~~~VdlvlsGH~H~yeR~ 363 (374)
.|.-+-++.+||+.+.||+|.+|-.
T Consensus 98 sL~~LaRqldvDILl~G~Th~f~Ay 122 (183)
T KOG3325|consen 98 SLALLARQLDVDILLTGHTHKFEAY 122 (183)
T ss_pred HHHHHHHhcCCcEEEeCCceeEEEE
Confidence 5555667889999999999997764
No 147
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=53.76 E-value=22 Score=31.53 Aligned_cols=64 Identities=20% Similarity=0.336 Sum_probs=35.2
Q ss_pred EEEEecCCCCCCcHHHHHHHHHh---CCC-eEEecccccccCCCCccccchhhHHHHHHHHHhhhcCC--eEEcCCCccc
Q 017284 164 FGIIGDLGQTYNSLSTLKHYMQS---GGQ-SVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQP--WIWSAGNHEI 237 (374)
Q Consensus 164 f~v~gD~~~~~~~~~~l~~~~~~---~~d-~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P--~~~v~GNHD~ 237 (374)
+-+.||+|... --+..+-+. -|| --|++||++..+-+ ..+.|..+ --++.+.| +-...||||.
T Consensus 48 VTvCGDIHGQF---yDL~eLFrtgG~vP~tnYiFmGDfVDRGyy-------SLEtfT~l-~~LkaryP~~ITLlRGNHEs 116 (306)
T KOG0373|consen 48 VTVCGDIHGQF---YDLLELFRTGGQVPDTNYIFMGDFVDRGYY-------SLETFTLL-LLLKARYPAKITLLRGNHES 116 (306)
T ss_pred eeEeeccchhH---HHHHHHHHhcCCCCCcceEEeccccccccc-------cHHHHHHH-HHHhhcCCceeEEeeccchh
Confidence 44679998742 122333333 344 35789999964322 11333332 23444444 5678999997
Q ss_pred c
Q 017284 238 E 238 (374)
Q Consensus 238 ~ 238 (374)
.
T Consensus 117 R 117 (306)
T KOG0373|consen 117 R 117 (306)
T ss_pred h
Confidence 4
No 148
>TIGR02855 spore_yabG sporulation peptidase YabG. Members of this family are the protein YabG, demonstrated for Bacillus subtilis to be an endopeptidase able to release N-terminal peptides from a number of sporulation proteins, including CotT, CotF, and SpoIVA. It appears to be expressed under control of sigma-K.
Probab=53.34 E-value=12 Score=34.42 Aligned_cols=50 Identities=24% Similarity=0.312 Sum_probs=33.7
Q ss_pred HHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCc-EEEEcCccc
Q 017284 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVD-FIFAGHVHA 359 (374)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~Vd-lvlsGH~H~ 359 (374)
+.|+..|+.-++-+.+ ++-.|.| ..++-+.+.+|+++++.| ||++||+-.
T Consensus 115 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 165 (283)
T TIGR02855 115 EYLRKCLKLYKKIGVP--VVGIHCK-----------EKEMPEKVLDLIEEVRPDILVITGHDAY 165 (283)
T ss_pred HHHHHHHHHHHHhCCc--eEEEEec-----------chhchHHHHHHHHHhCCCEEEEeCchhh
Confidence 4688888775433333 3333432 134567889999999999 589999944
No 149
>PF05582 Peptidase_U57: YabG peptidase U57; InterPro: IPR008764 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. The peptidases families associated with clan U- have an unknown catalytic mechanism as the protein fold of the active site domain and the active site residues have not been reported. This is a group of peptidases belong to MEROPS peptidase family U57 (clan U-). The type example is the YabG protein of Bacillus subtilis. This is a protease involved in the synthesis and maturation of the spore coat proteins SpoIVA and YrbA of B. subtilis [].
Probab=52.09 E-value=15 Score=33.84 Aligned_cols=50 Identities=24% Similarity=0.288 Sum_probs=34.0
Q ss_pred HHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCc-EEEEcCccc
Q 017284 297 WWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVD-FIFAGHVHA 359 (374)
Q Consensus 297 ~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~Vd-lvlsGH~H~ 359 (374)
+.|+..|+.-+.-+.+ +...|.| ..++-+.+.+|+.+++.| +||+||+=.
T Consensus 116 ~YL~~Cl~~Ykql~i~--a~G~~~~-----------E~eqp~~i~~Ll~~~~PDIlViTGHD~~ 166 (287)
T PF05582_consen 116 EYLNKCLKVYKQLGIP--AVGIHVP-----------EKEQPEKIYRLLEEYRPDILVITGHDGY 166 (287)
T ss_pred HHHHHHHHHHHHcCCc--eEEEEec-----------hHHhhHHHHHHHHHcCCCEEEEeCchhh
Confidence 4688888765333333 3333432 235677889999999999 589999964
No 150
>PRK09453 phosphodiesterase; Provisional
Probab=51.75 E-value=14 Score=31.69 Aligned_cols=14 Identities=29% Similarity=0.420 Sum_probs=12.1
Q ss_pred HcCCcEEEEcCccc
Q 017284 346 HSRVDFIFAGHVHA 359 (374)
Q Consensus 346 ~~~VdlvlsGH~H~ 359 (374)
..++|++++||+|.
T Consensus 116 ~~~~d~vi~GHtH~ 129 (182)
T PRK09453 116 LHDGDVLVYGHTHI 129 (182)
T ss_pred ccCCCEEEECCCCC
Confidence 45689999999997
No 151
>PF10179 DUF2369: Uncharacterised conserved protein (DUF2369); InterPro: IPR019326 This is a proline-rich region of a group of proteins found from plants to fungi. The function is largely unknown, although the entry contains Fibronectin type-III domain-containing protein C4orf31, which promotes matrix assembly and cell adhesiveness.
Probab=51.54 E-value=81 Score=29.60 Aligned_cols=19 Identities=16% Similarity=0.238 Sum_probs=16.0
Q ss_pred EEEeCCCCCCCEEEEEeCC
Q 017284 123 HCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~ 141 (374)
..+|.||+||+.|-..|..
T Consensus 261 tetI~~L~PG~~Yl~dV~~ 279 (300)
T PF10179_consen 261 TETIKGLKPGTTYLFDVYV 279 (300)
T ss_pred eeecccCCCCcEEEEEEEE
Confidence 4479999999999888754
No 152
>cd02850 Cellulase_N_term Cellulase N-terminus domain. Cellulases are O-glycosyl hydrolases (GHs) that hydrolyze beta 1-4 glucosidic bonds in cellulose. They are usually catagorized into either exoglucanases which sequentially release sugar units from the cellulose chain and endoglucanases which also attack the chain internally. The N-terminus of cellulase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=47.12 E-value=1.2e+02 Score=22.53 Aligned_cols=23 Identities=17% Similarity=0.281 Sum_probs=19.8
Q ss_pred cEEEEEEeCCC-CCCCEEEEEeCC
Q 017284 119 GYIHHCLVDDL-EYDTKYYYKIGD 141 (374)
Q Consensus 119 ~~~~~v~l~gL-~p~t~Y~Y~v~~ 141 (374)
...+++.++.| +|||+|+-+++.
T Consensus 55 ~~~~~~DFS~~~~pG~~Y~l~~~~ 78 (86)
T cd02850 55 DNVHIIDFSSYRTEGTGYYLSVDG 78 (86)
T ss_pred CeEEEEEcCCCcCCCCeEEEEECC
Confidence 37889999999 889899888876
No 153
>PF07353 Uroplakin_II: Uroplakin II; InterPro: IPR009952 This family contains uroplakin II, which is approximately 180 residues long and seems to be restricted to mammals. Uroplakin II is an integral membrane protein, and is one of the components of the apical plaques of mammalian urothelium formed by the asymmetric unit membrane - this is believed to play a role in strengthening the urothelial apical surface to prevent the cells from rupturing during bladder distension [].; GO: 0016044 cellular membrane organization, 0030176 integral to endoplasmic reticulum membrane
Probab=46.98 E-value=25 Score=29.42 Aligned_cols=33 Identities=33% Similarity=0.452 Sum_probs=21.7
Q ss_pred EEeCCCCCCCEEEEE--eCCC---CCCceEEEECCCCC
Q 017284 124 CLVDDLEYDTKYYYK--IGDG---DSSREFWFQTPPKI 156 (374)
Q Consensus 124 v~l~gL~p~t~Y~Y~--v~~~---~~s~~~~F~T~p~~ 156 (374)
-.+++|.|||+|+.+ |..+ ..|.+..-.|.|..
T Consensus 104 YqVtNL~pGTkY~isY~VtkgtstESS~~i~msT~n~~ 141 (184)
T PF07353_consen 104 YQVTNLQPGTKYYISYLVTKGTSTESSNEIPMSTLNRK 141 (184)
T ss_pred EEeeccCCCcEEEEEEEEecCccceecceecccccccc
Confidence 368899999999866 4444 23445555666654
No 154
>cd02852 Isoamylase_N_term Isoamylase N-terminus domain. Isoamylase (aka glycogen 6-glucanohydrolase) is one of the starch-debranching enzymes that catalyzes the hydrolysis of alpha-1,6-glucosidic linkages specific in alpha-glucans such as amylopectin or glycogen. Isoamylase contains a bound calcium ion, but this is not in the same position as the conserved calcium ion that has been reported in other alpha-amylase family enzymes. The N-terminus of isoamylase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=43.22 E-value=32 Score=27.21 Aligned_cols=23 Identities=26% Similarity=0.551 Sum_probs=20.5
Q ss_pred cEEEEEEeCCCCCCCEEEEEeCC
Q 017284 119 GYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 119 ~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
+-++++.+.++.+|+.|.|||..
T Consensus 48 ~gvW~~~v~~~~~g~~Y~y~v~g 70 (119)
T cd02852 48 GDVWHVFVEGLKPGQLYGYRVDG 70 (119)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 46888999999999999999974
No 155
>PF09294 Interfer-bind: Interferon-alpha/beta receptor, fibronectin type III; InterPro: IPR015373 Members of this family adopt a secondary structure consisting of seven beta-strands arranged in an immunoglobulin-like beta-sandwich, in a Greek-key topology. They are required for binding to interferon-alpha []. ; PDB: 1A21_A 3LQM_B 3ELA_T 1AHW_C 2A2Q_T 1TFH_B 1FAK_T 1WSS_T 1W2K_T 2FIR_T ....
Probab=42.59 E-value=21 Score=27.30 Aligned_cols=19 Identities=21% Similarity=0.336 Sum_probs=14.7
Q ss_pred EEEeCCCCCCCEEEEEeCC
Q 017284 123 HCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 123 ~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.++|.+|+|+|.|.-+|..
T Consensus 68 ~~~l~~L~p~t~YCv~V~~ 86 (106)
T PF09294_consen 68 SVTLSDLKPGTNYCVSVQA 86 (106)
T ss_dssp EEEEES--TTSEEEEEEEE
T ss_pred EEEEeCCCCCCCEEEEEEE
Confidence 3579999999999999865
No 156
>cd02856 Glycogen_debranching_enzyme_N_term Glycogen_debranching_enzyme N-terminal domain. Glycogen debranching enzymes have both 4-alpha-glucanotransferase and amylo-1,6-glucosidase activities. As a transferase it transfers a segment of a 1,4-alpha-D-glucan to a new 4-position in an acceptor, which may be glucose or another 1,4-alpha-D-glucan. As a glucosidase it catalyzes the endohydrolysis of 1,6-alpha-D-glucoside linkages at points of branching in chains of 1,4-linked alpha-D-glucose residues. The N-terminus of the glycogen debranching enzyme may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=42.10 E-value=35 Score=26.21 Aligned_cols=23 Identities=13% Similarity=0.437 Sum_probs=20.3
Q ss_pred cEEEEEEeCCCCCCCEEEEEeCC
Q 017284 119 GYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 119 ~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
+-+.++.+.++.+|+.|.|+|..
T Consensus 44 ~GvW~~~v~~~~~g~~Y~y~i~g 66 (103)
T cd02856 44 GGVWHGFLPGIKAGQRYGFRVHG 66 (103)
T ss_pred CCEEEEEECCCCCCCEEEEEECC
Confidence 46788899999999999999975
No 157
>PF08139 LPAM_1: Prokaryotic membrane lipoprotein lipid attachment site; InterPro: IPR012640 In prokaryotes, membrane lipoproteins are synthesized with a precursor signal peptide, which is cleaved by a specific lipoprotein signal peptidase (signal peptidase II). The peptidase recognises a conserved sequence and cuts upstream of a cysteine residue to which a glyceride-fatty acid lipid is attached [,]. This lipid attachment site is found in homologues of the VirB proteins of type IV secretion systems (T4SS). Conjugal transfer across the cell envelope of Gram-negative bacteria is mediated by a supramolecular structure termed mating pair formation (Mpf) complex. Collectively, secretion pathways ancestrally related to bacterial conjugation systems are now known as T4SS. T4SS are involved in the delivery of effector molecules to eukaryotic target cells; each of these systems exports distinct DNA or protein substrates to effect a myriad of changes in host cell physiology during infection [].
Probab=41.89 E-value=35 Score=19.21 Aligned_cols=18 Identities=22% Similarity=0.305 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHhhccC
Q 017284 11 LFQIMLYLTLLLSLNNGT 28 (374)
Q Consensus 11 ~~~~~~~~~~l~~~~~~~ 28 (374)
+.+|+....+++.|++|+
T Consensus 7 mKkil~~l~a~~~LagCs 24 (25)
T PF08139_consen 7 MKKILFPLLALFMLAGCS 24 (25)
T ss_pred HHHHHHHHHHHHHHhhcc
Confidence 345666666666677774
No 158
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=41.83 E-value=92 Score=33.32 Aligned_cols=96 Identities=20% Similarity=0.379 Sum_probs=56.4
Q ss_pred ccccCCCCCcCcCCCCccccCCCCCCCCceEEEEeeCCCCCceEEEEEcCCCC-CCceEEEeecCCC----C-CceEEeE
Q 017284 34 RFIRTEWPSADIPLHNKVFDIPKGHNAPQQVRITQGDYDGKAVIISWVTPNEL-GSNRVQYGKLEKK----Y-DSSAEGT 107 (374)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~lt~~~d~~~~~~v~W~t~~~~-~~~~V~y~~~~~~----~-~~~~~g~ 107 (374)
.|-|....+++||=..+ +.+|..+..... .+++.+.|.-+.+. +..-|.|...=.+ . .-..=|.
T Consensus 315 gyyRA~~Dp~~mpCT~P-------PSaP~nlis~vn---~Ts~~L~W~~P~d~GGR~Di~y~v~Ck~c~~~~~~C~~Cg~ 384 (996)
T KOG0196|consen 315 GYYRADSDPPSMPCTRP-------PSAPRNLISNVN---GTSLILEWSPPADTGGREDITYNVICKKCGGGRGACEPCGD 384 (996)
T ss_pred CcccCCCCCCCCCCCCC-------CCccceeeeecc---cceEEEEecCCcccCCCcceEEEEEeeccCCCCCccccCCC
Confidence 56677666777765542 256766666643 58999999988543 3556666553211 0 0011122
Q ss_pred EEEEEeecccccEEEEEEeCCCCCCCEEEEEeC
Q 017284 108 VTNYTFYKYKSGYIHHCLVDDLEYDTKYYYKIG 140 (374)
Q Consensus 108 ~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y~v~ 140 (374)
...|.... ..-..-+|.++||.|-|.|.+.|.
T Consensus 385 ~V~f~P~q-~gLt~~~V~v~~L~ah~~YTFeV~ 416 (996)
T KOG0196|consen 385 NVRFTPRQ-RGLTETSVTVSDLLAHTNYTFEVE 416 (996)
T ss_pred CceECCCC-CCcccceEEEeccccccccEEEEE
Confidence 22332110 111345789999999999999984
No 159
>PF13473 Cupredoxin_1: Cupredoxin-like domain; PDB: 1IBZ_D 1IC0_E 1IBY_D.
Probab=41.72 E-value=38 Score=25.99 Aligned_cols=65 Identities=11% Similarity=0.156 Sum_probs=32.0
Q ss_pred CCCCceEEEEeeCCCCCceEEEEEcCCCCCCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEEEE
Q 017284 58 HNAPQQVRITQGDYDGKAVIISWVTPNELGSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKYYY 137 (374)
Q Consensus 58 ~~~p~~v~lt~~~d~~~~~~v~W~t~~~~~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y~Y 137 (374)
...|..|.+-.| ..++|.|...+.. ...+.... +... ... ..+-.-.++++-++||+ |.|
T Consensus 31 ~f~P~~i~v~~G----~~v~l~~~N~~~~-~h~~~i~~----~~~~-----~~l-----~~g~~~~~~f~~~~~G~-y~~ 90 (104)
T PF13473_consen 31 GFSPSTITVKAG----QPVTLTFTNNDSR-PHEFVIPD----LGIS-----KVL-----PPGETATVTFTPLKPGE-YEF 90 (104)
T ss_dssp EEES-EEEEETT----CEEEEEEEE-SSS--EEEEEGG----GTEE-----EEE------TT-EEEEEEEE-S-EE-EEE
T ss_pred eEecCEEEEcCC----CeEEEEEEECCCC-cEEEEECC----CceE-----EEE-----CCCCEEEEEEcCCCCEE-EEE
Confidence 367888888765 4588999876432 22332222 1110 111 22344456677889986 888
Q ss_pred EeCCC
Q 017284 138 KIGDG 142 (374)
Q Consensus 138 ~v~~~ 142 (374)
.|...
T Consensus 91 ~C~~~ 95 (104)
T PF13473_consen 91 YCTMH 95 (104)
T ss_dssp B-SSS
T ss_pred EcCCC
Confidence 88754
No 160
>COG2843 PgsA Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) [Cell envelope biogenesis, outer membrane]
Probab=38.13 E-value=99 Score=29.99 Aligned_cols=68 Identities=13% Similarity=0.162 Sum_probs=41.5
Q ss_pred HHHHHhhccCCCCCeEEEEeccc-ceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccccccccc-CCceecC
Q 017284 299 LREELKKVDREKTPWLIVLMHVP-LYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYERSVRMS-FPFHFFY 374 (374)
Q Consensus 299 L~~~L~~~~~~~~~w~iv~~H~P-~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~yeR~~~~~-~~~h~~~ 374 (374)
.+.+++.++ +++.-+||+.|+- -|.... ...+.++..-+...+++++..+|-|.-+=.. ++ +++-+||
T Consensus 213 ~~~~v~~a~-k~adlviv~~HwG~ey~~~p------~~~q~~~a~~lidAGa~iIvGhhpHvlqpiE-~~~~~~~I~Y 282 (372)
T COG2843 213 VLAAVLAAK-KGADLVIVQPHWGVEYAYEP------AAGQRALARRLIDAGADIIVGHHPHVLQPIE-IYIQGKPILY 282 (372)
T ss_pred hHHHHHhhh-ccCCEEEEeccccccccCCC------cHHHHHHHHHHHhcCcCeEecCCCCcCcceE-EecCCcEEEE
Confidence 444555544 4677789999973 232221 1224455555666999999999999976553 33 4554443
No 161
>cd02853 MTHase_N_term Maltooligosyl trehalose synthase (MTSase) N-terminus domain. MTSase and maltooligosyl trehalose trehalohydrolase (MTHase) work together to produce trehalose. MTSase is responsible for converting the alpha-1,4-glucosidic linkage to an alpha,alpha-1,1-glucosidic linkage at the reducing end of the maltooligosaccharide through an intramolecular transglucosylation reaction, while MTHase hydrolyzes the penultimate alpha-1,4 linkage of the reducing end, resulting in the release of trehalose. The N-terminus of MTSase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=37.87 E-value=42 Score=24.69 Aligned_cols=21 Identities=24% Similarity=0.335 Sum_probs=18.3
Q ss_pred EEEEEEeCCCCCCCEEEEEeCC
Q 017284 120 YIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 120 ~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
-++++.+.++ +|+.|.|++..
T Consensus 40 G~W~~~v~~~-~g~~Y~y~v~~ 60 (85)
T cd02853 40 GWFEAEVPGA-AGTRYRYRLDD 60 (85)
T ss_pred cEEEEEeCCC-CCCeEEEEECC
Confidence 4677899999 99999999974
No 162
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=37.65 E-value=27 Score=35.89 Aligned_cols=48 Identities=21% Similarity=0.283 Sum_probs=29.0
Q ss_pred HHHHHHh-CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 180 LKHYMQS-GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 180 l~~~~~~-~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
+..+.++ -.|-+=++||+.+.+..+ +.. ++.+...--+=.-|||||+-
T Consensus 176 l~~lIqrL~VDhLHIvGDIyDRGp~p--------d~I---mD~Lm~~hsvDIQWGNHDIl 224 (640)
T PF06874_consen 176 LSELIQRLAVDHLHIVGDIYDRGPRP--------DKI---MDRLMNYHSVDIQWGNHDIL 224 (640)
T ss_pred HHHHHHHHhhhheeecccccCCCCCh--------hHH---HHHHhcCCCccccccchHHH
Confidence 3444444 889999999998543321 333 33333333445689999984
No 163
>cd02860 Pullulanase_N_term Pullulanase domain N-terminus. Pullulanase (AKA dextrinase; alpha-dextrin endo-1,6-alpha glucosidase) is an enzyme with action similar to that of isoamylase; it cleaves 1,6-alpha-glucosidic linkages in pullulan, amylopectin, and glycogen, and in alpha-and beta-amylase limit-dextrins of amylopectin and glycogen. The N-terminus of pullulanase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase.
Probab=35.84 E-value=46 Score=25.28 Aligned_cols=24 Identities=13% Similarity=0.093 Sum_probs=20.6
Q ss_pred ccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 118 SGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 118 ~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.+-++++.+.++.+|+.|.|++..
T Consensus 45 ~~gvw~~~v~~~~~g~~Y~y~i~~ 68 (100)
T cd02860 45 ENGVWSVTLDGDLEGYYYLYEVKV 68 (100)
T ss_pred CCCEEEEEeCCccCCcEEEEEEEE
Confidence 346788999999999999999964
No 164
>PRK13792 lysozyme inhibitor; Provisional
Probab=35.55 E-value=1.5e+02 Score=24.03 Aligned_cols=22 Identities=9% Similarity=0.312 Sum_probs=10.8
Q ss_pred CCceEEEEeeCCCCCceEEEEEcC
Q 017284 60 APQQVRITQGDYDGKAVIISWVTP 83 (374)
Q Consensus 60 ~p~~v~lt~~~d~~~~~~v~W~t~ 83 (374)
.++-++..=.+ ...++|.....
T Consensus 43 ~~~tv~YqC~~--~~~~tV~y~n~ 64 (127)
T PRK13792 43 DTRSVDYKCEN--GRKFTVQYLNK 64 (127)
T ss_pred ccceEEEECCC--CCEEEEEEeCC
Confidence 34445554432 23466666644
No 165
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=32.57 E-value=1.9e+02 Score=24.47 Aligned_cols=51 Identities=18% Similarity=0.149 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEc
Q 017284 293 TPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAG 355 (374)
Q Consensus 293 ~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsG 355 (374)
++..+=+.+.|++ .--.-.|+..|+|.+. +...+.+...+.+.+.|+++.|
T Consensus 58 ~~~~~~~~~~l~~---~yP~l~ivg~~~g~f~---------~~~~~~i~~~I~~~~pdiv~vg 108 (172)
T PF03808_consen 58 EEVLEKAAANLRR---RYPGLRIVGYHHGYFD---------EEEEEAIINRINASGPDIVFVG 108 (172)
T ss_pred HHHHHHHHHHHHH---HCCCeEEEEecCCCCC---------hhhHHHHHHHHHHcCCCEEEEE
Confidence 3444545556655 2223356666666651 2233466667778888888765
No 166
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.69 E-value=62 Score=32.06 Aligned_cols=40 Identities=8% Similarity=0.159 Sum_probs=26.8
Q ss_pred CcEEEEEecCCCCCC-cHHHHHHHHHh--CCCeEEeccccccc
Q 017284 161 PYTFGIIGDLGQTYN-SLSTLKHYMQS--GGQSVLFLGDLSYA 200 (374)
Q Consensus 161 ~~~f~v~gD~~~~~~-~~~~l~~~~~~--~~d~vl~~GD~~y~ 200 (374)
+.+++++||...... ....++.+.+. ..|++|..|++...
T Consensus 5 ~~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~ 47 (528)
T KOG2476|consen 5 DAKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGH 47 (528)
T ss_pred CceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCC
Confidence 369999999865321 12333444444 57999999999854
No 167
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=28.42 E-value=66 Score=30.82 Aligned_cols=67 Identities=18% Similarity=0.301 Sum_probs=33.1
Q ss_pred EEEEEecCCCCCCcHHHHHHHHHh--CC--CeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 163 TFGIIGDLGQTYNSLSTLKHYMQS--GG--QSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 163 ~f~v~gD~~~~~~~~~~l~~~~~~--~~--d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
-+-|.||+|... .+.+ ++-+- +| ---|++||++..+.. +- +...-.| .++ +.-..-.+...||||..
T Consensus 89 PiTVCGDIHGQf--~DLm-KLFEVGG~PA~t~YLFLGDYVDRGyF-Si--ECvlYLw--sLK-i~yp~tl~lLRGNHECr 159 (517)
T KOG0375|consen 89 PITVCGDIHGQF--FDLM-KLFEVGGSPANTRYLFLGDYVDRGYF-SI--ECVLYLW--SLK-INYPKTLFLLRGNHECR 159 (517)
T ss_pred CeeEecccchHH--HHHH-HHHHccCCcccceeEeecccccccee-ee--ehHHHHH--HHh-cCCCCeEEEecCCcchh
Confidence 355789998742 2222 22222 33 246789999964322 11 1110111 111 11123467799999974
No 168
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=28.24 E-value=1e+02 Score=23.75 Aligned_cols=27 Identities=22% Similarity=0.153 Sum_probs=14.5
Q ss_pred cEEEEEecCCCCCCcHHHHHHHHHhCCCe
Q 017284 162 YTFGIIGDLGQTYNSLSTLKHYMQSGGQS 190 (374)
Q Consensus 162 ~~f~v~gD~~~~~~~~~~l~~~~~~~~d~ 190 (374)
.+|+.+||.+... .+++.++.+.-|+-
T Consensus 65 ~kfiLIGDsgq~D--peiY~~ia~~~P~~ 91 (100)
T PF09949_consen 65 RKFILIGDSGQHD--PEIYAEIARRFPGR 91 (100)
T ss_pred CcEEEEeeCCCcC--HHHHHHHHHHCCCC
Confidence 4666666665532 45555555554443
No 169
>PF01784 NIF3: NIF3 (NGG1p interacting factor 3); InterPro: IPR002678 This family contains several NIF3 (NGG1p interacting factor 3) protein homologues. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown [][].; PDB: 1NMO_F 1NMP_B 2GX8_C 2FYW_B 2NYD_A 3LNL_A 2YYB_A 3RXY_F.
Probab=25.10 E-value=70 Score=28.90 Aligned_cols=43 Identities=12% Similarity=0.458 Sum_probs=21.7
Q ss_pred EEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccc
Q 017284 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 315 iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
+++.|||++-..... .............+.++++. +++-|+..
T Consensus 56 lIItHHP~~f~~~~~-~~~~~~~~~~~~~li~~~I~-vy~~Ht~l 98 (241)
T PF01784_consen 56 LIITHHPLFFKPLKS-LTGDDYKGKIIEKLIKNGIS-VYSAHTNL 98 (241)
T ss_dssp EEEESS-SSSSTSSH-CHCHSHHHHHHHHHHHTT-E-EEEESHHH
T ss_pred EEEEcCchhhcCCcc-ccccchhhHHHHHHHHCCCE-EEEecccc
Confidence 677899986533221 11222333444445557774 47888765
No 170
>PF02922 CBM_48: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro: IPR004193 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. This domain is found in a range of enzymes that act on branched substrates ie. isoamylase, pullulanase and branching enzyme. Isoamylase hydrolyses 1,6-alpha-D-glucosidic branch linkages in glycogen, amylopectin and dextrin; 1,4-alpha-glucan branching enzyme functions in the formation of 1,6-glucosidic linkages of glycogen; and pullulanase is a starch-debranching enzyme.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 2BHZ_A 2BY2_A 2BY3_A 2BXY_A 2BY1_A 2BHY_A 2BHU_A 2BXZ_A 2BY0_A 2FHB_A ....
Probab=24.71 E-value=87 Score=22.67 Aligned_cols=24 Identities=25% Similarity=0.317 Sum_probs=19.2
Q ss_pred cEEEEEEeC-CCCCCC-EEEEEeCCC
Q 017284 119 GYIHHCLVD-DLEYDT-KYYYKIGDG 142 (374)
Q Consensus 119 ~~~~~v~l~-gL~p~t-~Y~Y~v~~~ 142 (374)
.-+.++++. +|++|+ .|.|+|...
T Consensus 48 ~G~w~~~~~~~~~~g~~~Y~y~i~~~ 73 (85)
T PF02922_consen 48 DGVWEVTVPGDLPPGGYYYKYRIDGD 73 (85)
T ss_dssp TTEEEEEEEGCGTTTT-EEEEEEEET
T ss_pred CCEEEEEEcCCcCCCCEEEEEEEEeC
Confidence 357777888 899985 999999765
No 171
>PRK10425 DNase TatD; Provisional
Probab=24.23 E-value=82 Score=28.82 Aligned_cols=68 Identities=13% Similarity=0.071 Sum_probs=38.2
Q ss_pred EEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcc
Q 017284 279 HIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 279 ~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 358 (374)
-=|+||-.........|.++++++|+-+.+-+.| |+.|.+ .. . +.+.++|+++.... -.|+.|
T Consensus 90 GEiGLDy~~~~~~~~~Q~~vF~~ql~lA~~~~~P---v~iH~r----~a-----~----~~~l~iL~~~~~~~-~~~i~H 152 (258)
T PRK10425 90 GECGLDFNRNFSTPEEQERAFVAQLAIAAELNMP---VFMHCR----DA-----H----ERFMALLEPWLDKL-PGAVLH 152 (258)
T ss_pred eeeeeccccCCCCHHHHHHHHHHHHHHHHHhCCC---eEEEEe----Cc-----h----HHHHHHHHHhccCC-CCeEEE
Confidence 3466775432233468999999999876444444 345765 11 0 34556666652111 135568
Q ss_pred ccccc
Q 017284 359 AYERS 363 (374)
Q Consensus 359 ~yeR~ 363 (374)
+|.-+
T Consensus 153 ~fsG~ 157 (258)
T PRK10425 153 CFTGT 157 (258)
T ss_pred ecCCC
Confidence 87654
No 172
>PRK11449 putative deoxyribonuclease YjjV; Provisional
Probab=23.34 E-value=80 Score=28.86 Aligned_cols=66 Identities=23% Similarity=0.349 Sum_probs=38.2
Q ss_pred EEEEEeCCCCCCCChHHHHHHHHHHhhccCCCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCcc
Q 017284 279 HIIVLSSYSPYVKYTPQWWWLREELKKVDREKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVH 358 (374)
Q Consensus 279 ~fi~Ldt~~~~~~~~~Q~~WL~~~L~~~~~~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H 358 (374)
-=|+||-.........|.++|+++|+-+.+-+.| |+.|..- . .+.+.+++.++++. ..|..|
T Consensus 96 GEiGLD~~~~~~~~~~Q~~vf~~ql~lA~~~~~P---v~iH~r~----a---------~~~~~~il~~~~~~--~~~i~H 157 (258)
T PRK11449 96 GEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLP---VILHSRR----T---------HDKLAMHLKRHDLP--RTGVVH 157 (258)
T ss_pred EecccCCCCCCCCHHHHHHHHHHHHHHHHHhCCC---EEEEecC----c---------cHHHHHHHHhcCCC--CCeEEE
Confidence 3456774322223468999999999876544444 3457541 1 12555666776542 245677
Q ss_pred cccc
Q 017284 359 AYER 362 (374)
Q Consensus 359 ~yeR 362 (374)
+|.-
T Consensus 158 ~fsG 161 (258)
T PRK11449 158 GFSG 161 (258)
T ss_pred cCCC
Confidence 7754
No 173
>PRK10799 metal-binding protein; Provisional
Probab=22.94 E-value=1.7e+02 Score=26.48 Aligned_cols=47 Identities=9% Similarity=0.109 Sum_probs=25.6
Q ss_pred CCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccccc
Q 017284 310 KTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHAYE 361 (374)
Q Consensus 310 ~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ye 361 (374)
++. +++.|||++-...... ...........+.++++. +++-|++.-.
T Consensus 56 ~~d--lIitHHP~~~~~~~~~--~~~~~~~~~~~li~~~i~-vy~~Htn~D~ 102 (247)
T PRK10799 56 QAD--AVIVHHGYFWKGESPV--IRGMKRNRLKTLLANDIN-LYGWHLPLDA 102 (247)
T ss_pred CCC--EEEECCchhccCCCcc--ccchHHHHHHHHHHCCCe-EEEEecchhh
Confidence 454 5567999864332111 111233444555667764 4788887743
No 174
>PF13205 Big_5: Bacterial Ig-like domain
Probab=22.05 E-value=1.5e+02 Score=22.39 Aligned_cols=16 Identities=31% Similarity=0.441 Sum_probs=13.6
Q ss_pred CCCCCCCEEEEEeCCC
Q 017284 127 DDLEYDTKYYYKIGDG 142 (374)
Q Consensus 127 ~gL~p~t~Y~Y~v~~~ 142 (374)
..|+||++|.-.+..+
T Consensus 70 ~~L~~~t~Y~v~i~~~ 85 (107)
T PF13205_consen 70 QPLKPGTTYTVTIDSG 85 (107)
T ss_pred CcCCCCCEEEEEECCC
Confidence 4599999999999664
No 175
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=21.78 E-value=85 Score=28.28 Aligned_cols=15 Identities=47% Similarity=0.634 Sum_probs=12.4
Q ss_pred CCeEEcCCCcccccC
Q 017284 226 QPWIWSAGNHEIEFM 240 (374)
Q Consensus 226 ~P~~~v~GNHD~~~~ 240 (374)
.-+.+..||||+..+
T Consensus 128 knvvvlagnhein~n 142 (318)
T PF13258_consen 128 KNVVVLAGNHEINFN 142 (318)
T ss_pred cceEEEecCceeccC
Confidence 468899999999765
No 176
>TIGR03000 plancto_dom_1 Planctomycetes uncharacterized domain TIGR03000. Domains described by this model are found, so far, only in the Planctomycetes (Pirellula sp. strain 1 and Gemmata obscuriglobus), in up to six proteins per genome, and may be duplicated within a protein. The function is unknown.
Probab=21.73 E-value=1.9e+02 Score=21.04 Aligned_cols=24 Identities=21% Similarity=0.385 Sum_probs=18.9
Q ss_pred ccEEEEEEeCCCCCCCEEEEEeCC
Q 017284 118 SGYIHHCLVDDLEYDTKYYYKIGD 141 (374)
Q Consensus 118 ~~~~~~v~l~gL~p~t~Y~Y~v~~ 141 (374)
.+-.+...=.+|++|..|.|++..
T Consensus 25 ~G~~R~F~T~~L~~G~~y~Y~v~a 48 (75)
T TIGR03000 25 TGTVRTFTTPPLEAGKEYEYTVTA 48 (75)
T ss_pred CccEEEEECCCCCCCCEEEEEEEE
Confidence 345556667899999999999865
No 177
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=21.51 E-value=1e+02 Score=30.61 Aligned_cols=41 Identities=22% Similarity=0.215 Sum_probs=25.0
Q ss_pred CCCeEEecccccccCCCCccccchhhHHHHHHHHHhhhcCCeEEcCCCcccc
Q 017284 187 GGQSVLFLGDLSYADRYEYNDVGIRWDSWGRFIEQSAAYQPWIWSAGNHEIE 238 (374)
Q Consensus 187 ~~d~vl~~GD~~y~~~~~~~~~~~~w~~~~~~~~~~~~~~P~~~v~GNHD~~ 238 (374)
.+|-+=..||+-..+.++ |..++ .+...-.+=.-|||||+-
T Consensus 190 vVDhLHiVGDIyDRGP~p--------d~Imd---~L~~yhsvDiQWGNHDil 230 (648)
T COG3855 190 VVDHLHIVGDIYDRGPYP--------DKIMD---TLINYHSVDIQWGNHDIL 230 (648)
T ss_pred hhhheeeecccccCCCCc--------hHHHH---HHhhcccccccccCcceE
Confidence 788888999987543322 33333 333222344579999984
No 178
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=20.93 E-value=1.6e+02 Score=28.21 Aligned_cols=45 Identities=20% Similarity=0.287 Sum_probs=23.8
Q ss_pred CCCCeEEEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcC
Q 017284 309 EKTPWLIVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGH 356 (374)
Q Consensus 309 ~~~~w~iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH 356 (374)
...++++|.+|..-..... .....+.+.+..+.+..++.+++..|
T Consensus 178 ~~~~~iLvt~H~~t~~~~~---~~~~~i~~~l~~L~~~~~~~vi~~~h 222 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNP---ERLEQILEALKALAERQNVPVIFPLH 222 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH-----HHHHHHHHHHHHHHTTEEEEEE--
T ss_pred cCCCEEEEEeCcchhcCCh---HHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 4567888888755321100 01234555666666666888999988
No 179
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=20.80 E-value=1e+02 Score=24.44 Aligned_cols=23 Identities=9% Similarity=0.229 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHcC-CcEEEEcCc
Q 017284 335 SMRAVFESWFVHSR-VDFIFAGHV 357 (374)
Q Consensus 335 ~~r~~l~~ll~~~~-VdlvlsGH~ 357 (374)
.+.+.+..+.++++ ..++++||.
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHS 72 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHS 72 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEET
T ss_pred HHHHHHHHHHhcccCccchhhccc
Confidence 45667777888886 679999994
No 180
>PF00753 Lactamase_B: Metallo-beta-lactamase superfamily; InterPro: IPR001279 Apart from the beta-lactamases and metallo-beta-lactamases, a number of other proteins contain this domain []. These proteins include thiolesterases, members of the glyoxalase II family, that catalyse the hydrolysis of S-D-lactoyl-glutathione to form glutathione and D-lactic acid and a competence protein that is essential for natural transformation in Neisseria gonorrhoeae and could be a transporter involved in DNA uptake. Except for the competence protein these proteins bind two zinc ions per molecule as cofactor.; GO: 0016787 hydrolase activity; PDB: 3H3E_A 3Q6V_B 3SD9_B 3IOF_A 2GKL_A 1X8I_A 3FAI_A 2QDS_A 3IOG_A 3F9O_A ....
Probab=20.79 E-value=1.5e+02 Score=24.22 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=12.4
Q ss_pred hhhHHHHHHHHHhhhcCCeEEcCC
Q 017284 210 IRWDSWGRFIEQSAAYQPWIWSAG 233 (374)
Q Consensus 210 ~~w~~~~~~~~~~~~~~P~~~v~G 233 (374)
..|..+.+.++.+...-|-+.++|
T Consensus 170 ~~~~~~~~~l~~~~~~~~~~ii~g 193 (194)
T PF00753_consen 170 SNWEESIEALRRLEALDPEVIIPG 193 (194)
T ss_dssp THHHHHHHHHHHHHTSTTSEEEES
T ss_pred HHHHHHHHHHHHHHCCCCCEEEeC
Confidence 344555555555555445555553
No 181
>PRK10378 inactive ferrous ion transporter periplasmic protein EfeO; Provisional
Probab=20.40 E-value=4.8e+02 Score=25.39 Aligned_cols=18 Identities=17% Similarity=0.124 Sum_probs=11.1
Q ss_pred hhHHHHHHHHHHHHhhcc
Q 017284 10 PLFQIMLYLTLLLSLNNG 27 (374)
Q Consensus 10 ~~~~~~~~~~~l~~~~~~ 27 (374)
++++-.+...+|+.+.+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~ 21 (375)
T PRK10378 4 NFRRNALQLALAALFSSA 21 (375)
T ss_pred hhhhhHHHHHHHHhccCC
Confidence 455656666666666665
No 182
>KOG4222 consensus Axon guidance receptor Dscam [Signal transduction mechanisms]
Probab=20.13 E-value=1.9e+02 Score=32.25 Aligned_cols=76 Identities=21% Similarity=0.318 Sum_probs=41.5
Q ss_pred CCCceE-EEEeeCCCCCceEEEEEcCCCC--CCceEEEeecCCCCCceEEeEEEEEEeecccccEEEEEEeCCCCCCCEE
Q 017284 59 NAPQQV-RITQGDYDGKAVIISWVTPNEL--GSNRVQYGKLEKKYDSSAEGTVTNYTFYKYKSGYIHHCLVDDLEYDTKY 135 (374)
Q Consensus 59 ~~p~~v-~lt~~~d~~~~~~v~W~t~~~~--~~~~V~y~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~l~gL~p~t~Y 135 (374)
..|+.+ |++.+....++..|+|.-+-.. +...+.|...- ..++.+.+.........+-.|+|.+|.+|+.|
T Consensus 747 app~~~~~~s~~~~n~Ta~~Vsw~~pp~d~~ng~~qg~ki~~------~~~e~tr~h~n~t~~a~~~sv~i~~l~~g~ay 820 (1281)
T KOG4222|consen 747 APPQGVQHVSKGSYNGTAGSVSWAPPPADVQNGILQGYKIEC------SGGEKTRIHINKTTNARTGSVTIGNLVTGIAY 820 (1281)
T ss_pred CCCCCccccccccCCCceeeEEecCCcccccCCcccceeEEe------ecCccccccccccccCCCCceEeccccccceE
Confidence 345554 6777766678899999876210 11122222211 01110111100001235667899999999999
Q ss_pred EEEeC
Q 017284 136 YYKIG 140 (374)
Q Consensus 136 ~Y~v~ 140 (374)
.|+|.
T Consensus 821 ~vtv~ 825 (1281)
T KOG4222|consen 821 SVTVA 825 (1281)
T ss_pred EEEEe
Confidence 99984
No 183
>TIGR00486 YbgI_SA1388 dinuclear metal center protein, YbgI/SA1388 family. The characterization of this family of uncharacterized proteins as orthologous is tentative. Members are found in all three domains of life. Several members (from Bacillus subtilis, Listeria monocytogenes, and Mycobacterium tuberculosis - all classified as Firmicutes within the Eubacteria) share a long insert relative to other members.
Probab=20.02 E-value=2.1e+02 Score=25.92 Aligned_cols=42 Identities=10% Similarity=0.237 Sum_probs=22.0
Q ss_pred EEEecccceecCCCCCCCCHHHHHHHHHHHHHcCCcEEEEcCccc
Q 017284 315 IVLMHVPLYSSNVVHYMEGESMRAVFESWFVHSRVDFIFAGHVHA 359 (374)
Q Consensus 315 iv~~H~P~y~~~~~~~~~~~~~r~~l~~ll~~~~VdlvlsGH~H~ 359 (374)
+++.|||++-.....- ......+. ...+.++++. +++-|+..
T Consensus 60 lIitHHP~~f~~~~~~-~~~~~~~~-~~~li~~~I~-vy~~Ht~l 101 (249)
T TIGR00486 60 LIITHHPLIWKPLKRL-IRGIKPGR-LKILLQNDIS-LYSAHTNL 101 (249)
T ss_pred EEEEcCccccCCcccc-cCCCHHHH-HHHHHHCCCe-EEEeecch
Confidence 6667999864332111 11112233 3456677774 47777754
Done!