BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017286
(374 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8W3M7|Y4598_ARATH Uncharacterized protein At4g06598 OS=Arabidopsis thaliana
GN=At4g06598 PE=2 SV=2
Length = 265
Score = 231 bits (588), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/272 (51%), Positives = 177/272 (65%), Gaps = 14/272 (5%)
Query: 1 MANSKGSSNIRNSLFTGKHALLPPKSPFPSISPAYSDYLPTGVIGPKAVQKPREGSVHHQ 60
MA+SKGS N RN GK ALLPPKSPF +D++P+ VIG KAVQK EG+ +H
Sbjct: 1 MASSKGSQNHRNLGCNGKQALLPPKSPFTGGPTFSADFVPSSVIGSKAVQKLGEGNANHH 60
Query: 61 RTSSESFLMEEQPSWLDDLLNEPETPVRRGGHRRSSSDSFAYIDLVNASNLDYAAQDESR 120
RTSSESFL+EEQPSWLDDLLNEPETPVR+GGHRRSSSDSFAY+D+ ++DY D R
Sbjct: 61 RTSSESFLIEEQPSWLDDLLNEPETPVRKGGHRRSSSDSFAYVDVPVGFDVDYTLWDGGR 120
Query: 121 Y--KHLVSVPSWGPQDIDYHKDTRHSPFYAELNSLKLKNRAWDNPINALPHPGNLPSARE 178
Y + S GP++ DY + ++ PFY + K K R WD +LP G P++
Sbjct: 121 YNNNNGFSNHVRGPKESDYLR-SQPVPFYPSAHLSKQKIRPWD----SLPDSGARPNSSS 175
Query: 179 NVVLQNLGSPAQDADGVPSTTSEKLETAEAGPHD-----SKSSSEKKDNSHAKASASDTE 233
+ + + + + + T EK +A D +KSS EK+DN AK++ S+ +
Sbjct: 176 GCLESSSITRSGSSGSLRDT--EKAYSAADSKKDFINNFAKSSFEKRDNPLAKSATSEAD 233
Query: 234 TKRAKQQFAQRSRVRKLQYIAELERNVQSLQA 265
TKRA+QQFAQRSRVRK+QYIAELERNVQ LQ
Sbjct: 234 TKRARQQFAQRSRVRKIQYIAELERNVQMLQV 265
>sp|Q69IL4|RF2A_ORYSJ Transcription factor RF2a OS=Oryza sativa subsp. japonica GN=RF2a
PE=1 SV=1
Length = 380
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 197 STTSEKLETAEAGPHDSKSSSEKKDNSHAK-ASASDTETKRAKQ-----QFAQRSRVRKL 250
S +E+L A G S+ KK S AK A + + KRAK+ Q A RS+ RK+
Sbjct: 144 SIKAEELVGASPGTEGMSSAEAKKAVSAAKLAELALVDPKRAKRIWANRQSAARSKERKM 203
Query: 251 QYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKCLEHE 310
+YIAELER VQ+LQ E T +SA+L L + L+ EN LK RL+++ Q+ ++ ++
Sbjct: 204 RYIAELERKVQTLQTEATTLSAQLALLQRDTSGLTTENSELKLRLQTMEQQVHLQDALND 263
Query: 311 VLEREIGRLRVVYQQ 325
L+ E+ RL+V Q
Sbjct: 264 TLKSEVQRLKVATGQ 278
>sp|Q9MA75|VIP1_ARATH Transcription factor VIP1 OS=Arabidopsis thaliana GN=VIP1 PE=1 SV=1
Length = 341
Score = 69.7 bits (169), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 8/120 (6%)
Query: 237 AKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQRLE 296
A +Q A RS+ RK++Y ELER VQ+LQ E T +SA++ L + L+ ENK LK RL+
Sbjct: 203 ANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQVTMLQRGTSELNTENKHLKMRLQ 262
Query: 297 SLAQEQLIKCLEHEVLEREIGRLRVVYQQQQQQQPPQKPSSSHRR---TSSRDLDSQFAN 353
+L Q+ ++ +E L E+ RL+VV + PQ +S+ R +S + +QF N
Sbjct: 263 ALEQQAELRDALNEALRDELNRLKVVA-----GEIPQGNGNSYNRAQFSSQQSAMNQFGN 317
>sp|Q04088|POF21_ARATH Probable transcription factor PosF21 OS=Arabidopsis thaliana
GN=POSF21 PE=2 SV=1
Length = 398
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 6/128 (4%)
Query: 204 ETAEAGPHDSKSSSEKKDNSHAK-ASASDTETKRAKQ-----QFAQRSRVRKLQYIAELE 257
E +G D + KK S K A + + KRAK+ Q A RS+ RK +YI ELE
Sbjct: 171 EMLMSGNEDDSAIDAKKSMSATKLAELALIDPKRAKRIWANRQSAARSKERKTRYIFELE 230
Query: 258 RNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQRLESLAQEQLIKCLEHEVLEREIG 317
R VQ+LQ E T +SA+L L + L++EN LK RL+++ Q+ ++ +E L+ EI
Sbjct: 231 RKVQTLQTEATTLSAQLTLLQRDTNGLTVENNELKLRLQTMEQQVHLQDELNEALKEEIQ 290
Query: 318 RLRVVYQQ 325
L+V+ Q
Sbjct: 291 HLKVLTGQ 298
>sp|Q6S4P4|RF2B_ORYSJ Transcription factor RF2b OS=Oryza sativa subsp. japonica GN=RF2b
PE=1 SV=1
Length = 329
Score = 65.5 bits (158), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%)
Query: 237 AKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQRLE 296
A +Q A RS+ RK +YI ELER VQ+LQ E T +SA+L + LS EN LK RL+
Sbjct: 141 ANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLSAENAELKIRLQ 200
Query: 297 SLAQEQLIKCLEHEVLEREIGRLRVV 322
++ Q+ ++ ++ L++E+ RL++
Sbjct: 201 AMEQQAQLRDALNDALKQELERLKLA 226
>sp|Q99142|TAF1_TOBAC Transcriptional activator TAF-1 (Fragment) OS=Nicotiana tabacum
GN=TAF1 PE=2 SV=1
Length = 265
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 235 KRAKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQR 294
K++ ++ A+RSR+RK EL VQSL AE + +E+ L + + L +EN AL +R
Sbjct: 201 KQSNRESARRSRLRKQAEAEELAIRVQSLTAENMTLKSEINKLMENSEKLKLENAALMER 260
Query: 295 LE 296
L+
Sbjct: 261 LK 262
>sp|P42776|GBF3_ARATH G-box-binding factor 3 OS=Arabidopsis thaliana GN=GBF3 PE=1 SV=2
Length = 382
Score = 39.3 bits (90), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%)
Query: 235 KRAKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQR 294
K++ ++ A+RSR+RK EL R V++L AE + +EL LN+++ L N L +
Sbjct: 266 KQSNRESARRSRLRKQAETEELARKVEALTAENMALRSELNQLNEKSDKLRGANATLLDK 325
Query: 295 LESLAQEQLI 304
L+ E+ +
Sbjct: 326 LKCSEPEKRV 335
>sp|P12959|OP2_MAIZE Regulatory protein opaque-2 OS=Zea mays GN=O2 PE=1 SV=1
Length = 453
Score = 38.1 bits (87), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 235 KRAKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQR 294
K + ++ A+RSR RK ++ ELE V L+AE + + + LNQ+ +++N+ L+
Sbjct: 232 KESNRESARRSRYRKAAHLKELEDQVAQLKAENSCLLRRIAALNQKYNDANVDNRVLRAD 291
Query: 295 LESL 298
+E+L
Sbjct: 292 METL 295
>sp|P87090|CPC1_CRYPA Cross-pathway control protein 1 OS=Cryphonectria parasitica
GN=CPC-1 PE=3 SV=1
Length = 247
Score = 37.7 bits (86), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 235 KRAKQQFAQR-SRVRKLQYIAELERNVQSLQAEGTEVSAEL 274
KRAK A R SR RK + + ELER V+ L+AE +++AEL
Sbjct: 192 KRAKNTLAARKSRARKAERMDELERQVRELEAEKEKLAAEL 232
>sp|Q9FUD3|BZIP9_ARATH Basic leucine zipper 9 OS=Arabidopsis thaliana GN=BZIP9 PE=1 SV=1
Length = 277
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 128 PSWGPQDIDYHKDTRHSPFYAE----------LNSLKLKNRAWDNPINALPHPGNLPSAR 177
P + + DY + R S ++E S +N + D+P++A N P R
Sbjct: 31 PCFDLMNRDYTCELRDSLLWSEGLFPAGPFRDAQSSICENLSADSPVSA-----NKPEVR 85
Query: 178 ENVVLQNLGSPAQDADGVPSTTSEKLETAEAGPHDSKSSSEKKDNSHAKASASDTETKRA 237
V GS ++D E AE S+ +++ D + S+ E+
Sbjct: 86 GGVRRTTSGSSHVNSDD---------EDAETEAGQSEMTNDPNDLKRIRRMNSNRES--- 133
Query: 238 KQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQRLES 297
A+RSR RK +Y+ +LE V SL+ + + + +L QQ N+ LK +E+
Sbjct: 134 ----AKRSRRRKQEYLVDLETQVDSLKGDNSTLYKQLIDATQQFRSAGTNNRVLKSDVET 189
Query: 298 L 298
L
Sbjct: 190 L 190
>sp|P24068|OCS1_MAIZE Ocs element-binding factor 1 OS=Zea mays GN=OBF1 PE=2 SV=2
Length = 151
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 228 SASDT---ETKR-AKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLI 283
SA+DT E +R + ++ A+RSR+RK Q++ EL + V LQA+ V+A + Q
Sbjct: 20 SAADTHRREKRRLSNRESARRSRLRKQQHLDELVQEVARLQADNARVAARARDIASQYTR 79
Query: 284 LSMENKALKQRLESLA 299
+ EN L+ R L
Sbjct: 80 VEQENTVLRARAAELG 95
>sp|P42774|GBF1_ARATH G-box-binding factor 1 OS=Arabidopsis thaliana GN=GBF1 PE=2 SV=2
Length = 315
Score = 36.2 bits (82), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 44/83 (53%)
Query: 235 KRAKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQR 294
K++ ++ A+RSR+RK +L++ V+SL E + EL+ L+ + L EN +++
Sbjct: 229 KQSNRESARRSRLRKQAECEQLQQRVESLSNENQSLRDELQRLSSECDKLKSENNSIQDE 288
Query: 295 LESLAQEQLIKCLEHEVLEREIG 317
L+ + + + LE + G
Sbjct: 289 LQRVLGAEAVANLEQNAAGSKDG 311
>sp|P42775|GBF2_ARATH G-box-binding factor 2 OS=Arabidopsis thaliana GN=GBF2 PE=1 SV=1
Length = 360
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 15/93 (16%)
Query: 235 KRAKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQR 294
K++ ++ A+RSR+RK +L V +L AE + ++L LN ++ L +EN+A+ +
Sbjct: 256 KQSNRESARRSRLRKQAETEQLSVKVDALVAENMSLRSKLGQLNNESEKLRLENEAILDQ 315
Query: 295 LESLA---QEQLI------------KCLEHEVL 312
L++ A E LI K ++H++L
Sbjct: 316 LKAQATGKTENLISRVDKNNSVSGSKTVQHQLL 348
>sp|P25032|EMBP1_WHEAT DNA-binding protein EMBP-1 OS=Triticum aestivum PE=1 SV=1
Length = 354
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 235 KRAKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQR 294
K++ ++ A+RSR+RK Q EL + V L A + +EL+ L + + ENK L +
Sbjct: 257 KQSNRESARRSRLRKQQECEELAQKVSELTAANGTLRSELDQLKKDCKTMETENKKLMGK 316
Query: 295 L 295
+
Sbjct: 317 I 317
>sp|P05411|JUN_AVIS1 Viral jun-transforming protein OS=Avian sarcoma virus (strain 17)
GN=JUN PE=1 SV=2
Length = 287
Score = 35.0 bits (79), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 233 ETKRAKQQFA-QRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQ 280
E KR + + A +SR RKL+ IA LE V++L+A+ +E+++ L +Q
Sbjct: 212 ERKRMRNRIAASKSRKRKLERIARLEEKVKTLKAQNSELASTANMLREQ 260
>sp|Q8IDX6|RBP2A_PLAF7 Reticulocyte-binding protein 2 homolog a OS=Plasmodium falciparum
(isolate 3D7) GN=PF13_0198 PE=3 SV=1
Length = 3130
Score = 33.9 bits (76), Expect = 2.2, Method: Composition-based stats.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 13/116 (11%)
Query: 235 KRAKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQR 294
KR +Q+ Q+ K Q LER Q ++ E E Q+ L E +Q
Sbjct: 2740 KRQEQERLQKEEELKRQEQERLEREKQE------QLQKEEELKRQEQERLQKEEALKRQE 2793
Query: 295 LESLAQEQLIKCLEHEVLEREIGRLRVVYQQQQQQQPPQKPSSSHRRTSSRDLDSQ 350
E L +E+ +K E E LERE Q+Q Q++ K R L Q
Sbjct: 2794 QERLQKEEELKRQEQERLERE-------KQEQLQKEEELKRQEQERLQKEEALKRQ 2842
>sp|Q08378|GOGA3_HUMAN Golgin subfamily A member 3 OS=Homo sapiens GN=GOLGA3 PE=1 SV=2
Length = 1498
Score = 33.5 bits (75), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 8/81 (9%)
Query: 224 HAKASASDTETKRAKQQFAQRSRVRKLQYIAELERNVQSLQAEGTEVSA---ELEFLNQQ 280
H + ++ E R ++ AQ VR Q++A+LE ++QS Q E E+ L+F +Q
Sbjct: 891 HGEKRTAEAELSRLHREVAQ---VR--QHMADLEGHLQSAQKERDEMETHLQSLQFDKEQ 945
Query: 281 NLILSMENKALKQRLESLAQE 301
+ ++ N+ALK+++E L QE
Sbjct: 946 MVAVTEANEALKKQIEELQQE 966
>sp|Q3SZZ2|XBP1_BOVIN X-box-binding protein 1 OS=Bos taurus GN=XBP1 PE=2 SV=1
Length = 261
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 242 AQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQRL 295
AQ +R RK ++ELE+ V L+ E ++ E + L ++ L +EN+ L+QRL
Sbjct: 84 AQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGLVVENQELRQRL 137
>sp|P19880|YAP1_YEAST AP-1-like transcription factor YAP1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YAP1 PE=1 SV=2
Length = 650
Score = 32.3 bits (72), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Query: 231 DTETKR---AKQQFAQRS-RVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSM 286
D ETK+ A+ + AQR+ R RK + + ELE+ VQSL++ + E FL Q ++++
Sbjct: 63 DPETKQKRTAQNRAAQRAFRERKERKMKELEKKVQSLESIQQQNEVEATFLRDQ--LITL 120
Query: 287 ENKALKQRLESLAQEQLIKCL 307
N+ K R E+ ++++ L
Sbjct: 121 VNELKKYRPETRNDSKVLEYL 141
>sp|P17861|XBP1_HUMAN X-box-binding protein 1 OS=Homo sapiens GN=XBP1 PE=2 SV=2
Length = 261
Score = 31.6 bits (70), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 242 AQRSRVRKLQYIAELERNVQSLQAEGTEVSAELEFLNQQNLILSMENKALKQRL 295
AQ +R RK ++ELE+ V L+ E ++ E + L ++ L +EN+ L+QRL
Sbjct: 84 AQTARDRKKARMSELEQQVVDLEEENQKLLLENQLLREKTHGLVVENQELRQRL 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.125 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 138,776,638
Number of Sequences: 539616
Number of extensions: 5910135
Number of successful extensions: 30169
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 85
Number of HSP's successfully gapped in prelim test: 539
Number of HSP's that attempted gapping in prelim test: 27254
Number of HSP's gapped (non-prelim): 2714
length of query: 374
length of database: 191,569,459
effective HSP length: 119
effective length of query: 255
effective length of database: 127,355,155
effective search space: 32475564525
effective search space used: 32475564525
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)