Query 017287
Match_columns 374
No_of_seqs 186 out of 1387
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 07:14:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017287.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017287hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0748 Predicted membrane pro 100.0 2E-70 4.4E-75 524.2 22.3 273 45-373 5-278 (286)
2 PF03006 HlyIII: Haemolysin-II 100.0 1E-54 2.2E-59 402.4 19.1 221 85-358 1-222 (222)
3 COG1272 Predicted membrane pro 100.0 1.1E-42 2.5E-47 320.6 18.6 225 61-367 1-225 (226)
4 TIGR01065 hlyIII channel prote 100.0 4.6E-41 1E-45 308.8 19.8 171 174-364 33-203 (204)
5 PRK15087 hemolysin; Provisiona 100.0 5.3E-39 1.2E-43 297.8 20.6 166 176-365 50-216 (219)
6 KOG4243 Macrophage maturation- 99.8 2.8E-20 6E-25 168.3 4.3 170 174-366 114-289 (298)
7 PF05875 Ceramidase: Ceramidas 97.2 0.044 9.4E-07 52.3 18.7 166 181-361 57-234 (262)
8 PF04080 Per1: Per1-like ; In 96.3 0.42 9.2E-06 45.8 18.0 165 181-364 90-265 (267)
9 KOG2970 Predicted membrane pro 95.6 0.28 6E-06 47.3 13.1 171 181-370 142-315 (319)
10 PF13965 SID-1_RNA_chan: dsRNA 91.0 4.3 9.2E-05 43.2 13.5 53 306-362 487-553 (570)
11 PF12036 DUF3522: Protein of u 84.2 4.6 0.0001 36.6 7.6 36 189-224 39-77 (186)
12 KOG4255 Uncharacterized conser 84.0 18 0.00039 36.0 11.9 24 273-296 144-167 (439)
13 COG5237 PER1 Predicted membran 62.7 1.5E+02 0.0032 28.5 12.4 47 53-106 78-124 (319)
14 PF06609 TRI12: Fungal trichot 36.3 1.4E+02 0.003 32.2 8.0 22 207-228 232-253 (599)
15 PF10348 DUF2427: Domain of un 31.3 2.9E+02 0.0063 22.5 8.0 31 322-359 67-97 (105)
16 PF03839 Sec62: Translocation 29.2 1.5E+02 0.0032 27.8 6.0 17 272-288 134-151 (224)
17 TIGR00869 sec62 protein transl 28.1 1.2E+02 0.0026 28.6 5.2 14 275-288 146-159 (232)
18 PF14619 SnAC: Snf2-ATP coupli 27.1 25 0.00053 26.9 0.4 18 48-65 17-34 (74)
19 KOG2927 Membrane component of 25.8 1.2E+02 0.0025 30.4 4.8 18 271-288 212-230 (372)
20 KOG3059 N-acetylglucosaminyltr 24.1 6.8E+02 0.015 24.4 11.9 83 273-370 118-219 (292)
21 COG4323 Predicted membrane pro 22.8 68 0.0015 25.5 2.1 67 205-282 22-90 (105)
22 PF02694 UPF0060: Uncharacteri 21.4 1.7E+02 0.0036 24.3 4.2 26 315-341 66-91 (107)
23 PRK02237 hypothetical protein; 21.3 1.8E+02 0.004 24.1 4.4 25 316-341 69-93 (109)
No 1
>KOG0748 consensus Predicted membrane proteins, contain hemolysin III domain [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=2e-70 Score=524.18 Aligned_cols=273 Identities=45% Similarity=0.827 Sum_probs=243.1
Q ss_pred hcccccceecccCCchhhcCCcccCCccCCCCHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccccccccccc
Q 017287 45 KSKRYGLVSFWELPEYMKDNEYVLHYYRANWPIKEALFSIFRWHNETLNVWTHLIGFIIFVALTVANLMEVPQVAGLISF 124 (374)
Q Consensus 45 ~~~~~~L~~~~elP~~l~dN~yI~~GYR~~~s~~~cl~SlF~~HNETvNIWTHlig~i~f~~l~~~~~~~~~~~~~~~~~ 124 (374)
..+.++++++||+|+|+||||||++|||+..|.++|++|+|++||||+||||||+|+++|+.+.+......
T Consensus 5 ~~~~~~l~~~~~lP~~~~dn~yi~~gyR~~~s~~~c~~S~f~~hNEt~NiwTHLlg~i~f~~~~~~~~~~~--------- 75 (286)
T KOG0748|consen 5 LLKRPRLLPWDELPEWLKDNEYILTGYRPGSSFRACFKSIFQWHNETLNIWTHLLGFILFLFLLILFMPRV--------- 75 (286)
T ss_pred cccccccCChhhCCHHHhcCcceeCccCCCCCHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHcccc---------
Confidence 45678899999999999999999999997799999999999999999999999999999999887654321
Q ss_pred cccCCCCCCCCccCCCCCCccccCCCcccchhhhhhhcccccCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhcccCc
Q 017287 125 FTRSFPNSGDTNVSHGSNGFFTGGGATNLVDLKQIASSEMGANITPATTPVTRWPFLVFLAGSMFCLLSSSICHLFCCHS 204 (374)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~~~~~~~St~yH~f~~hS 204 (374)
..+.. . . ..+. +.+|.++ ++++|++||+++|||
T Consensus 76 ------------~~~~~--------------~--------------~--~~~~--~~lf~~~---~~~~S~~~H~~~~~s 108 (286)
T KOG0748|consen 76 ------------LLPVD--------------S--------------H--LSEK--IFLFFLG---CLLLSSLYHLFSCHS 108 (286)
T ss_pred ------------ccccc--------------c--------------c--chHH--HHHHHHH---HHHHHHHHHHHhccc
Confidence 00000 0 0 0001 4555555 444499999999999
Q ss_pred HHHHHHHHhhchhhhHHHhhhcchhHhhHhhccCchhHHHHHHHHHHHHHHHHHHHhccccccCcccchhhhhhhhccch
Q 017287 205 RRLNILLLRIDYSGITVMIITSFFPPIYYIFQCEPRWHFIYLGGVTALGIFTIVTLLSPALSAGKFRAFRALLFCSMGFF 284 (374)
Q Consensus 205 ~~~~~~~~~lDy~GI~llI~gs~~p~~yy~f~c~~~~~~~y~~~i~~l~l~~i~~~l~~~~~~~~~r~~R~~~f~~~g~~ 284 (374)
+++++.|.++||+||+++|.||++|.+||+|+|.+.++.+|+.++.+++++++++++.+++.++++|.+|+.+|+.+|.+
T Consensus 109 ~~~~~~~~~lDY~GIs~li~gS~~~~~yy~f~c~~~~~~iy~~~~~~lgi~~~~~~l~~~~~~~~~r~~R~~~f~~~~~~ 188 (286)
T KOG0748|consen 109 EKVSRFFLKLDYAGISLLIIGSFLPIIYYAFYCHPFFRLIYLPIILVLGLLAIFVSLSDKFRTPKRRPLRAGVFLLLGLS 188 (286)
T ss_pred HHHHHHHHHccHHhhHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHheeechhhhCCccchhhHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHhcCC-CcchhHHHHHHHHHHHHHHhHhhhhccCCccCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHH
Q 017287 285 GFVPAIHAAIVNWSN-PKRDITLAYESAMALFYLTGTMFYVTRIPERWKPGWFDLAGHSHQIFHVFVVFGALAHYSATLV 363 (374)
Q Consensus 285 ~~~Pi~h~i~~~~~~-~~~~~~l~~~l~~~~~y~~G~~fY~~r~PEr~~PG~FD~~G~SHqiwHi~Vv~g~~~h~~a~~~ 363 (374)
+++|++|+++..++. +.+...+.++..++++|++|++||++|+||||+|||||+|||||||||++|++|+++|+.++..
T Consensus 189 ~i~P~~h~~~~~g~~~~~~~~~~~~~~~~~~~yi~ga~fY~~riPER~~PGkfD~~G~SHQifHv~vv~~a~~~~~a~~~ 268 (286)
T KOG0748|consen 189 GILPLLHRLILFGGRGPEVVIALGYVILMAVLYLLGALFYATRIPERWFPGKFDIWGHSHQIFHVLVVLAALFHLEAVLL 268 (286)
T ss_pred hccHhhhheeeecCCccceehhhhHHHHHHHHHHHHHHHhhcCCCcccCCCccceeCChhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887654 4567889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCC
Q 017287 364 FLEWRDRFGC 373 (374)
Q Consensus 364 ~~~~r~~~~C 373 (374)
++++|++..|
T Consensus 269 ~~~~~~~~~~ 278 (286)
T KOG0748|consen 269 DYEWRHSHLC 278 (286)
T ss_pred HHHHHHhccC
Confidence 9999999844
No 2
>PF03006 HlyIII: Haemolysin-III related; InterPro: IPR004254 Members of this family are integral membrane proteins. This family includes proteins that are hemolysin-III homologs.; GO: 0016021 integral to membrane
Probab=100.00 E-value=1e-54 Score=402.41 Aligned_cols=221 Identities=43% Similarity=0.803 Sum_probs=194.5
Q ss_pred hhhcchhHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCccCCCCCCccccCCCcccchhhhhhhccc
Q 017287 85 FRWHNETLNVWTHLIGFIIFVALTVANLMEVPQVAGLISFFTRSFPNSGDTNVSHGSNGFFTGGGATNLVDLKQIASSEM 164 (374)
Q Consensus 85 F~~HNETvNIWTHlig~i~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 164 (374)
|++||||+|||||++|+++++.+........ ..
T Consensus 1 F~~hNEt~NiwtHll~~~~~~~~~~~l~~~~-----------------------~~------------------------ 33 (222)
T PF03006_consen 1 FQLHNETVNIWTHLLGAILFLALLIFLLSLA-----------------------SS------------------------ 33 (222)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------hc------------------------
Confidence 7899999999999999999987665433210 00
Q ss_pred ccCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhcccCcH-HHHHHHHhhchhhhHHHhhhcchhHhhHhhccCchhHH
Q 017287 165 GANITPATTPVTRWPFLVFLAGSMFCLLSSSICHLFCCHSR-RLNILLLRIDYSGITVMIITSFFPPIYYIFQCEPRWHF 243 (374)
Q Consensus 165 ~~~~~~~~~~~~~~~~~if~~~~~~~~~~St~yH~f~~hS~-~~~~~~~~lDy~GI~llI~gs~~p~~yy~f~c~~~~~~ 243 (374)
+..++.+++++.+|++|+++|+++|++||+++|||+ +++++|+++||+||+++|+||++|.+||+++|++.+++
T Consensus 34 -----~~~~~~~~~~~~~~~~~~~~~~~~St~yH~f~~~s~~~~~~~~~~lD~~gI~l~i~gs~~p~~~~~~~~~~~~~~ 108 (222)
T PF03006_consen 34 -----PSFSPWDYIPFLIYLLSAILCFLCSTLYHLFSCHSEGKVYHIFLRLDYAGIFLLIAGSYTPFIYYGFYCHPWLGW 108 (222)
T ss_pred -----cCCCHHHHHHHHHHHHHHHHHHHhHHHhhCCCcCCcHHHHHHHHhcchhhhhHhHhhhhhhHHHhhccccchHHH
Confidence 000245688999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccccCcccchhhhhhhhccchhhHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhHhhh
Q 017287 244 IYLGGVTALGIFTIVTLLSPALSAGKFRAFRALLFCSMGFFGFVPAIHAAIVNWSNPKRDITLAYESAMALFYLTGTMFY 323 (374)
Q Consensus 244 ~y~~~i~~l~l~~i~~~l~~~~~~~~~r~~R~~~f~~~g~~~~~Pi~h~i~~~~~~~~~~~~l~~~l~~~~~y~~G~~fY 323 (374)
.|+..+++++++++...+.+.+.++|+|.+|+..|+++|+++++|+.|+.....+...... +.+++.++++|++|++||
T Consensus 109 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~y~~G~~fy 187 (222)
T PF03006_consen 109 FYLAFIWILALIGIVLSLFPCFSSPRFRWLRTIFFLLLGWSGIIPIFHRIFFLGGWGSPDP-LWLLILGGVLYLLGAVFY 187 (222)
T ss_pred HHHHHHHHHHHHhHHhhcchhhcCCccceeeehHhHHHHHHHHhhhHHHHHHhccccchHH-HHHHHHHHHHHHHhHHHh
Confidence 9999999999999999888888889999999999999999999999996544322111224 888999999999999999
Q ss_pred hccCCccCCCCcccCCCCchhHHHHHHHHHHHHHH
Q 017287 324 VTRIPERWKPGWFDLAGHSHQIFHVFVVFGALAHY 358 (374)
Q Consensus 324 ~~r~PEr~~PG~FD~~G~SHqiwHi~Vv~g~~~h~ 358 (374)
++|+|||++||+||+||+||||||++|++|+++||
T Consensus 188 ~~~~PEr~~pg~fD~~g~sHqi~Hi~v~~~~~~h~ 222 (222)
T PF03006_consen 188 ATRIPERWFPGKFDIWGHSHQIWHIFVVLAALCHY 222 (222)
T ss_pred hhccccccCCCCcCCCCccHHHHHHHHHHHHHHHC
Confidence 99999999999999999999999999999999996
No 3
>COG1272 Predicted membrane protein, hemolysin III homolog [General function prediction only]
Probab=100.00 E-value=1.1e-42 Score=320.57 Aligned_cols=225 Identities=28% Similarity=0.414 Sum_probs=192.3
Q ss_pred hhcCCcccCCccCCCCHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCCccCCC
Q 017287 61 MKDNEYVLHYYRANWPIKEALFSIFRWHNETLNVWTHLIGFIIFVALTVANLMEVPQVAGLISFFTRSFPNSGDTNVSHG 140 (374)
Q Consensus 61 l~dN~yI~~GYR~~~s~~~cl~SlF~~HNETvNIWTHlig~i~f~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (374)
++||+++.+|||.. .+++|||+.|+|||++|+++.+..+....... +.
T Consensus 1 ~~d~~~~~~~~~~~---------~~~~~~e~~n~~tHlvGail~i~~l~~l~~~a-----------------------~~ 48 (226)
T COG1272 1 QRDNNYIAEGKRSK---------SYSWHEEIANAITHLIGAILAIVGLVLLLVYA-----------------------LI 48 (226)
T ss_pred CCCchhhhcccccc---------cccccccHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------Hh
Confidence 47899999999987 88999999999999999999987766543210 00
Q ss_pred CCCccccCCCcccchhhhhhhcccccCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHhhchhhhH
Q 017287 141 SNGFFTGGGATNLVDLKQIASSEMGANITPATTPVTRWPFLVFLAGSMFCLLSSSICHLFCCHSRRLNILLLRIDYSGIT 220 (374)
Q Consensus 141 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~~~~~~~~St~yH~f~~hS~~~~~~~~~lDy~GI~ 220 (374)
..+..+.+++.+|+++++.|+++|++||.++.+ ++.+.+++|+||+||+
T Consensus 49 ------------------------------~~~~~~~~~~~iy~~sl~~l~~~St~YH~~~~~-~~~k~~~rk~DH~~I~ 97 (226)
T COG1272 49 ------------------------------TGSALAVIVFSIYGLSLFLLFLVSTLYHSIPNG-QKAKAILRKFDHSGIY 97 (226)
T ss_pred ------------------------------cCChhHhhhhhHHHHHHHHHHHHHHHHHcCCCc-hHHHHHHHHccHHHHH
Confidence 123456778999999999999999999999976 8999999999999999
Q ss_pred HHhhhcchhHhhHhhccCchhHHHHHHHHHHHHHHHHHHHhccccccCcccchhhhhhhhccchhhHHHHHHHHHhcCCC
Q 017287 221 VMIITSFFPPIYYIFQCEPRWHFIYLGGVTALGIFTIVTLLSPALSAGKFRAFRALLFCSMGFFGFVPAIHAAIVNWSNP 300 (374)
Q Consensus 221 llI~gs~~p~~yy~f~c~~~~~~~y~~~i~~l~l~~i~~~l~~~~~~~~~r~~R~~~f~~~g~~~~~Pi~h~i~~~~~~~ 300 (374)
++|+|||+|.+++.++|. +++.++.++|.+|++|+...+. ..+|+|++++.+|++|||+++.|+.+.+ ...
T Consensus 98 vLIAgSyTP~~l~~l~~~--~~~~~~~iiW~lal~Gi~~kl~---~~~~~r~ls~~~yl~mGw~~v~~~~~l~-~~l--- 168 (226)
T COG1272 98 VLIAGSYTPFLLVGLYGP--LGWILLGLIWGLALAGILFKLF---FKKRFRKLSLVLYLAMGWLGLIVIKPLI-AKL--- 168 (226)
T ss_pred HHHHHhhHHHhHHHhccc--hHHHHHHHHHHHHHHHHhhhhh---ccCcCceeeehhhHHHHHHHHHHHHHHH-HhC---
Confidence 999999999999999764 8888999999999999987654 4488999999999999999998875433 322
Q ss_pred cchhHHHHHHHHHHHHHHhHhhhhccCCccCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHH
Q 017287 301 KRDITLAYESAMALFYLTGTMFYVTRIPERWKPGWFDLAGHSHQIFHVFVVFGALAHYSATLVFLEW 367 (374)
Q Consensus 301 ~~~~~l~~~l~~~~~y~~G~~fY~~r~PEr~~PG~FD~~G~SHqiwHi~Vv~g~~~h~~a~~~~~~~ 367 (374)
....+.++++||++|.+|++||+.|+ |.++++|||||+||++|+.+||.+++.++..
T Consensus 169 -~~~~~~~l~~GGv~YsvG~ifY~~~~---------~~~~~~H~iwH~fVv~ga~~Hf~ai~~~~~~ 225 (226)
T COG1272 169 -GLIGLVLLALGGVLYSVGAIFYVLRI---------DRIPYSHAIWHLFVVGGAACHFIAILFYVIL 225 (226)
T ss_pred -chHHHHHHHHHhHHheeeeEEEEEee---------ccCCchHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 24678999999999999999999997 5555899999999999999999999987753
No 4
>TIGR01065 hlyIII channel protein, hemolysin III family. This family includes proteins from pathogenic and non-pathogenic bacteria, Homo sapiens and Drosophila. In Bacillus cereus, a pathogen, it has been show to function as a channel-forming cytolysin. The human protein is expressed preferentially in mature macrophages, consistent with a role cytolytic role.
Probab=100.00 E-value=4.6e-41 Score=308.79 Aligned_cols=171 Identities=22% Similarity=0.300 Sum_probs=147.5
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHhhchhhhHHHhhhcchhHhhHhhccCchhHHHHHHHHHHHH
Q 017287 174 PVTRWPFLVFLAGSMFCLLSSSICHLFCCHSRRLNILLLRIDYSGITVMIITSFFPPIYYIFQCEPRWHFIYLGGVTALG 253 (374)
Q Consensus 174 ~~~~~~~~if~~~~~~~~~~St~yH~f~~hS~~~~~~~~~lDy~GI~llI~gs~~p~~yy~f~c~~~~~~~y~~~i~~l~ 253 (374)
..+++++.+|++|+++|+++|++||+++ ||++++++++|+||+||+++|+||++|++|++++|.+ ++.++..+|.++
T Consensus 33 ~~~~~~~~vy~~~~~~~~~~St~yH~~~-~s~~~~~~~~rlD~~gI~~lIaGsytP~~~~~~~~~~--~~~~~~~iw~la 109 (204)
T TIGR01065 33 AVAVLGFSIYGISLILLFLVSTLYHSIP-KGSKAKNWLRKIDHSMIYVLIAGTYTPFLLLALPGPL--GWTVLWIIWGLA 109 (204)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCc-CchhHHHHHHHccHHHHHHHHHHhhHHHHHHHcCCcH--HHHHHHHHHHHH
Confidence 3467889999999999999999999999 8999999999999999999999999999999997654 445566788888
Q ss_pred HHHHHHHhccccccCcccchhhhhhhhccchhhHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhHhhhhccCCccCCC
Q 017287 254 IFTIVTLLSPALSAGKFRAFRALLFCSMGFFGFVPAIHAAIVNWSNPKRDITLAYESAMALFYLTGTMFYVTRIPERWKP 333 (374)
Q Consensus 254 l~~i~~~l~~~~~~~~~r~~R~~~f~~~g~~~~~Pi~h~i~~~~~~~~~~~~l~~~l~~~~~y~~G~~fY~~r~PEr~~P 333 (374)
++|+. .+.+..+++|++|+.+|++|||++++|+.+ +... .....+.+++.|+++|++|++||+.|+|||+.|
T Consensus 110 ~~gi~---~~~~~~~~~r~~r~~~y~~~G~~~v~~~~~-~~~~----~~~~~~~~l~~gg~~Y~~G~~fY~~~~p~~~~~ 181 (204)
T TIGR01065 110 IGGII---YKLFFHKRPRWLSLFLYLIMGWLVVLVIKP-LYHN----LPGAGFSLLAAGGLLYTVGAIFYALKWPIPFTY 181 (204)
T ss_pred HHHHH---HHHHccCCCchhHHHHHHHHHHHHHHHHHH-HHHh----CCHHHHHHHHHHhHHHHcchHheeecCCCCCCc
Confidence 77765 456778899999999999999999876533 2222 234578899999999999999999999999744
Q ss_pred CcccCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 017287 334 GWFDLAGHSHQIFHVFVVFGALAHYSATLVF 364 (374)
Q Consensus 334 G~FD~~G~SHqiwHi~Vv~g~~~h~~a~~~~ 364 (374)
|||||+||++|+.+|+.+++.+
T Consensus 182 ---------H~iwH~fV~~g~~~h~~~i~~~ 203 (204)
T TIGR01065 182 ---------HAIWHLFVLGASACHFVAILFY 203 (204)
T ss_pred ---------ChHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999865
No 5
>PRK15087 hemolysin; Provisional
Probab=100.00 E-value=5.3e-39 Score=297.77 Aligned_cols=166 Identities=19% Similarity=0.329 Sum_probs=143.6
Q ss_pred cchhHHHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHhhchhhhHHHhhhcchhHhhHhhccCchhHHHHHHHHHHHHHH
Q 017287 176 TRWPFLVFLAGSMFCLLSSSICHLFCCHSRRLNILLLRIDYSGITVMIITSFFPPIYYIFQCEPRWHFIYLGGVTALGIF 255 (374)
Q Consensus 176 ~~~~~~if~~~~~~~~~~St~yH~f~~hS~~~~~~~~~lDy~GI~llI~gs~~p~~yy~f~c~~~~~~~y~~~i~~l~l~ 255 (374)
+..++.+|++|+++|+++||+||+++ +++.+++++|+||+||+++|+|||+|++|+++.| .+.+.++..+|.++++
T Consensus 50 ~~~~~~vy~~s~~~l~~~StlYH~~~--~~~~~~~~~rlDh~~I~llIaGsytP~~~~~~~~--~~~~~l~~~iW~~a~~ 125 (219)
T PRK15087 50 AITSYSLYGGSMILLFLASTLYHAIP--HQRAKRWLKKFDHCAIYLLIAGTYTPFLLVGLDS--PLARGLMIVIWSLALL 125 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCC--chHHHHHHHHccHHHHHHHHHHhhHHHHHHHccC--HHHHHHHHHHHHHHHH
Confidence 45678999999999999999999998 4788999999999999999999999999999854 4566677788988888
Q ss_pred HHHHHhccccccCcccchhhhhhhhccchhhHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhHhhhhcc-CCccCCCC
Q 017287 256 TIVTLLSPALSAGKFRAFRALLFCSMGFFGFVPAIHAAIVNWSNPKRDITLAYESAMALFYLTGTMFYVTR-IPERWKPG 334 (374)
Q Consensus 256 ~i~~~l~~~~~~~~~r~~R~~~f~~~g~~~~~Pi~h~i~~~~~~~~~~~~l~~~l~~~~~y~~G~~fY~~r-~PEr~~PG 334 (374)
|++.. .+..+|+|++|+.+|++|||++++|+.+..... ...++.++++||++|++|++||+.| +||
T Consensus 126 Gi~~~---~~~~~~~r~l~~~~Yl~mGw~~v~~~~~l~~~~-----~~~~l~~l~~GG~~Y~~G~~fY~~~~~p~----- 192 (219)
T PRK15087 126 GILFK---LAFAHRFKVLSLVTYLAMGWLSLIVIYQLAIKL-----AIGGVTLLAVGGVVYSLGVIFYVCKRIPY----- 192 (219)
T ss_pred HHHHH---HHhcCCCchHHHHHHHHHHHHHHHHHHHHHHhC-----CHHHHHHHHHHhHHHHhhHHHHccCCCCC-----
Confidence 88653 456788999999999999999999987654321 2567889999999999999999985 553
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHHHHHHHH
Q 017287 335 WFDLAGHSHQIFHVFVVFGALAHYSATLVFL 365 (374)
Q Consensus 335 ~FD~~G~SHqiwHi~Vv~g~~~h~~a~~~~~ 365 (374)
||||||+||++|+.+|+.+++.++
T Consensus 193 -------~H~IwH~fVl~ga~~H~~ai~~~~ 216 (219)
T PRK15087 193 -------NHAIWHGFVLGGSVCHFLAIYLYV 216 (219)
T ss_pred -------chhHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999998765
No 6
>KOG4243 consensus Macrophage maturation-associated protein [Defense mechanisms]
Probab=99.80 E-value=2.8e-20 Score=168.26 Aligned_cols=170 Identities=20% Similarity=0.225 Sum_probs=133.1
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHhhhcccC-c-----HHHHHHHHhhchhhhHHHhhhcchhHhhHhhccCchhHHHHHH
Q 017287 174 PVTRWPFLVFLAGSMFCLLSSSICHLFCCH-S-----RRLNILLLRIDYSGITVMIITSFFPPIYYIFQCEPRWHFIYLG 247 (374)
Q Consensus 174 ~~~~~~~~if~~~~~~~~~~St~yH~f~~h-S-----~~~~~~~~~lDy~GI~llI~gs~~p~~yy~f~c~~~~~~~y~~ 247 (374)
+.+++..++|+++.+.+|..||.||+.+.. | +..++.+.++|-+.|+++|++||.|++-.- ....+..-+-.
T Consensus 114 d~q~i~awIYG~~lc~LFt~STvfH~~~~~~~hqn~~r~l~~~lH~cDRa~IY~FIAaSY~PWLtLr--~~g~~~~~m~W 191 (298)
T KOG4243|consen 114 DWQKITAWIYGMGLCALFTVSTVFHIVSWKKSHQNKLRTLEHCLHMCDRAVIYFFIAASYAPWLTLR--ELGPLASHMRW 191 (298)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhhhhhhcccccccHH--hhCcHHHHHHH
Confidence 445667899999999999999999998742 2 347888999999999999999999987543 23334444455
Q ss_pred HHHHHHHHHHHHHhccccccCcccchhhhhhhhccchhhHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhHhhhhccC
Q 017287 248 GVTALGIFTIVTLLSPALSAGKFRAFRALLFCSMGFFGFVPAIHAAIVNWSNPKRDITLAYESAMALFYLTGTMFYVTRI 327 (374)
Q Consensus 248 ~i~~l~l~~i~~~l~~~~~~~~~r~~R~~~f~~~g~~~~~Pi~h~i~~~~~~~~~~~~l~~~l~~~~~y~~G~~fY~~r~ 327 (374)
++|+++.+|++.. .+..+||+.+.+.+|+.||+.-.+-+ . . .....++..+..||.+|++|++|+.+.
T Consensus 192 ~IWlmA~~Gi~Yq---~~fHErYK~lEt~~Ylvmg~gPalvv---~--s---m~~~~Gl~~l~~GG~~Y~lGvvFFK~D- 259 (298)
T KOG4243|consen 192 FIWLMAAGGIIYQ---FLFHERYKVLETFFYLVMGFGPALVV---T--S---MNNTDGLQELATGGLFYCLGVVFFKSD- 259 (298)
T ss_pred HHHHHHhcchhhh---hhHHHHHHHHHHHHHHHHhcCceEEE---E--E---eCCchhHHHHHhCCEEEEEEEEEEecC-
Confidence 6899999998754 45668999999999999998633211 1 1 113567889999999999999999875
Q ss_pred CccCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 017287 328 PERWKPGWFDLAGHSHQIFHVFVVFGALAHYSATLVFLE 366 (374)
Q Consensus 328 PEr~~PG~FD~~G~SHqiwHi~Vv~g~~~h~~a~~~~~~ 366 (374)
.-.| ..|.|||+||++|+.|||.|++.++-
T Consensus 260 --G~ip-------fAHAIWHLFV~l~A~cHyYAi~~~Ly 289 (298)
T KOG4243|consen 260 --GIIP-------FAHAIWHLFVALAAGCHYYAIWKYLY 289 (298)
T ss_pred --Ccee-------hHHHHHHHHHHHHcchhHHHHHHHHh
Confidence 2223 59999999999999999999997763
No 7
>PF05875 Ceramidase: Ceramidase; InterPro: IPR008901 This entry consists of several ceramidases. Ceramidases are enzymes involved in regulating cellular levels of ceramides, sphingoid bases, and their phosphates.; GO: 0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, 0006672 ceramide metabolic process, 0016021 integral to membrane
Probab=97.20 E-value=0.044 Score=52.27 Aligned_cols=166 Identities=11% Similarity=0.104 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHhhchhhhHHHhhhcchhHhhHhhccC---chhHHHHHHHHHHHHHHHH
Q 017287 181 LVFLAGSMFCLLSSSICHLFCCHSRRLNILLLRIDYSGITVMIITSFFPPIYYIFQCE---PRWHFIYLGGVTALGIFTI 257 (374)
Q Consensus 181 ~if~~~~~~~~~~St~yH~f~~hS~~~~~~~~~lDy~GI~llI~gs~~p~~yy~f~c~---~~~~~~y~~~i~~l~l~~i 257 (374)
.+..++.++.-+.|+.||+... ...+.+|-..|...+.. .+|..+... +..+......+.+.+++..
T Consensus 57 ~l~~~~l~~VGiGS~~FHaTl~------~~~ql~DelPMl~~~~~----~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~t 126 (262)
T PF05875_consen 57 ALLYLGLALVGIGSFLFHATLS------YWTQLLDELPMLWATLL----FLYIVLTRRYSSPRYRLALPLLLFIYAVVVT 126 (262)
T ss_pred HHHHHHHHHHHHhHHHHHhChh------hhHHHhhhhhHHHHHHH----HHHHHhcccccCchhhHHHHHHHHHHHHHHH
Confidence 4445566666789999998653 34567798777655432 223333222 2233332222222222222
Q ss_pred HHHhccccccCcccchhhhhhhhccchhhHHHHHHHHHhcCC-CcchhHHHHHHHHHHHHHHhHhhhhccCC--ccCCCC
Q 017287 258 VTLLSPALSAGKFRAFRALLFCSMGFFGFVPAIHAAIVNWSN-PKRDITLAYESAMALFYLTGTMFYVTRIP--ERWKPG 334 (374)
Q Consensus 258 ~~~l~~~~~~~~~r~~R~~~f~~~g~~~~~Pi~h~i~~~~~~-~~~~~~l~~~l~~~~~y~~G~~fY~~r~P--Er~~PG 334 (374)
+.. +..++ .......|..+....++.....+.....+ ......-.+...+.+.+++|.++.....+ +.+...
T Consensus 127 ~~~----~~~~~-p~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~f~~a~~~W~iD~~~C~~~~~~ 201 (262)
T PF05875_consen 127 VLY----FVLDN-PVFHQIAFASLVLLVILRSIYLIRRRVRDACRRRRARRLLLFGLALFLVAFFFWNIDRIFCSSLRAI 201 (262)
T ss_pred HHH----hhhcc-chhhhhhHHHHHHHHHHHHHHHHHHhcCchhhchHHHHHHHHHHHHHHHHHHHHHhHHHHHcccccc
Confidence 211 11111 12223334444433322221111111111 11223344556677888888888776532 111111
Q ss_pred c------ccCCCCchhHHHHHHHHHHHHHHHHH
Q 017287 335 W------FDLAGHSHQIFHVFVVFGALAHYSAT 361 (374)
Q Consensus 335 ~------FD~~G~SHqiwHi~Vv~g~~~h~~a~ 361 (374)
+ +.+.-+-|-+||+++.+|++......
T Consensus 202 ~~~~g~p~~~~le~H~~WHilt~ig~Y~~~~~~ 234 (262)
T PF05875_consen 202 RFPYGLPLGFLLELHAWWHILTGIGAYLLIVFV 234 (262)
T ss_pred ccccCCcchhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 2 22233589999999999997776543
No 8
>PF04080 Per1: Per1-like ; InterPro: IPR007217 A member of this family has been implemented in protein processing in the endoplasmic reticulum [].
Probab=96.33 E-value=0.42 Score=45.84 Aligned_cols=165 Identities=15% Similarity=0.191 Sum_probs=82.9
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHhhchhhhHHHhhhcchhHhhHhhcc--CchhHHHHHHHHHHHHHHHHH
Q 017287 181 LVFLAGSMFCLLSSSICHLFCCHSRRLNILLLRIDYSGITVMIITSFFPPIYYIFQC--EPRWHFIYLGGVTALGIFTIV 258 (374)
Q Consensus 181 ~if~~~~~~~~~~St~yH~f~~hS~~~~~~~~~lDy~GI~llI~gs~~p~~yy~f~c--~~~~~~~y~~~i~~l~l~~i~ 258 (374)
.++.+..+.-.+.|+++|+=-. ..--|+||.+=...+..+....+...|.- ++..+......+.+ ..+
T Consensus 90 ~~~~~v~~naW~wStvFH~RD~------~~TE~lDYf~A~a~vl~~l~~~~~R~f~l~~~~~~~~~~~~~~~~----~~~ 159 (267)
T PF04080_consen 90 IIYAIVSMNAWIWSTVFHTRDT------PLTEKLDYFSAGATVLFGLYAAIVRIFRLYRRRRLRRIFTALCIA----FYI 159 (267)
T ss_pred ehHHHHHHHHHHHHHHHHHhcc------cHhhHhHHhhhHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHH----HHH
Confidence 4466666777889999999653 35569999998888887766555444432 11222211111111 111
Q ss_pred HHhccccccCccc---chhhhhhhhccchhhH-HHHHHHHHhcCCCcc---hhH-HH-HHHHHHHHHHHhHhhhhccCCc
Q 017287 259 TLLSPALSAGKFR---AFRALLFCSMGFFGFV-PAIHAAIVNWSNPKR---DIT-LA-YESAMALFYLTGTMFYVTRIPE 329 (374)
Q Consensus 259 ~~l~~~~~~~~~r---~~R~~~f~~~g~~~~~-Pi~h~i~~~~~~~~~---~~~-l~-~~l~~~~~y~~G~~fY~~r~PE 329 (374)
.-+.. ....++. ..++- +++|+...+ =+.......-..+.. ... .. +.++-.+...+++.+=...+|-
T Consensus 160 ~Hv~y-L~~~~fdY~YNM~~n--v~~G~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~p~~~v~~~~lam~LEl~DFpP 236 (267)
T PF04080_consen 160 AHVSY-LSFVRFDYGYNMKAN--VAVGLLQNILWLLWSFRNYRRYPSVKKSYSKRWKLWPILFVVLTILAMSLELFDFPP 236 (267)
T ss_pred HHHHH-ccccccccHhHHHHH--HHHHHHHHHHHHHHHHHhcccccccccchhHHHHHHHHHHHHHHHHHHHHHhhccCc
Confidence 11111 1111221 23332 333332221 111111111000100 000 11 1112334445666666777774
Q ss_pred cCCCCcccCCCCchhHHHHHHHHHHHHHHHHHHHH
Q 017287 330 RWKPGWFDLAGHSHQIFHVFVVFGALAHYSATLVF 364 (374)
Q Consensus 330 r~~PG~FD~~G~SHqiwHi~Vv~g~~~h~~a~~~~ 364 (374)
-+ |.+| +|.+||+..+.-+...|.-+..+
T Consensus 237 ~~--~~lD----AHALWHl~Tip~~~~wy~Fl~~D 265 (267)
T PF04080_consen 237 IF--WLLD----AHALWHLATIPPTYLWYDFLIDD 265 (267)
T ss_pred cc--ccch----HHHHHHHHHhhHHHHHHHHHHHh
Confidence 32 6789 99999999999988888766654
No 9
>KOG2970 consensus Predicted membrane protein [Function unknown]
Probab=95.65 E-value=0.28 Score=47.32 Aligned_cols=171 Identities=12% Similarity=0.190 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHHHHHhhhcccCcHHHHHHHHhhchhhhHHHhhhcchhHhhHhhc--cCchhHHHHHHHHHHHHHHHH-
Q 017287 181 LVFLAGSMFCLLSSSICHLFCCHSRRLNILLLRIDYSGITVMIITSFFPPIYYIFQ--CEPRWHFIYLGGVTALGIFTI- 257 (374)
Q Consensus 181 ~if~~~~~~~~~~St~yH~f~~hS~~~~~~~~~lDy~GI~llI~gs~~p~~yy~f~--c~~~~~~~y~~~i~~l~l~~i- 257 (374)
.+|..-.+.-..-|+++|..-+ .+-.|+||++-++.+..+..-.+-..+. ..|.. ..++..+ ++++.+.
T Consensus 142 ~I~a~i~mnawiwSsvFH~rD~------~lTEklDYf~A~~~vlf~ly~a~ir~~~i~~~~~~-~~~ita~-fla~ya~H 213 (319)
T KOG2970|consen 142 LIYAYIGMNAWIWSSVFHIRDV------PLTEKLDYFSAYLTVLFGLYVALIRMLSIQSLPAL-RGMITAI-FLAFYANH 213 (319)
T ss_pred hhHHHHHHHHHHHHHhhhhcCC------chHhhhhHHHHHHHHHHHHHHHHHHHHHHhcchhh-hHHHHHH-HHHHHHHH
Confidence 4455556667788999999876 3566999998887776554433322221 11212 2222211 1111111
Q ss_pred HHHhccccccCcccchhhhhhhhccchhhHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHhHhhhhccCCccCCCCccc
Q 017287 258 VTLLSPALSAGKFRAFRALLFCSMGFFGFVPAIHAAIVNWSNPKRDITLAYESAMALFYLTGTMFYVTRIPERWKPGWFD 337 (374)
Q Consensus 258 ~~~l~~~~~~~~~r~~R~~~f~~~g~~~~~Pi~h~i~~~~~~~~~~~~l~~~l~~~~~y~~G~~fY~~r~PEr~~PG~FD 337 (374)
+.-+ .+..=.+ .....+=+++|..-.+--++..+..-..|....-...++. .+..++..+=...+|- .-|.+|
T Consensus 214 i~yl--s~~~fdY-gyNm~~~v~~g~iq~vlw~~~~~~~~~~~s~~~i~~~~i~--~~~~LA~sLEi~DFpP--y~~~iD 286 (319)
T KOG2970|consen 214 ILYL--SFYNFDY-GYNMIVCVAIGVIQLVLWLVWSFKKRNLPSFWRIWPILIV--IFFFLAMSLEIFDFPP--YAWLID 286 (319)
T ss_pred HHHH--hheeccc-ccceeeehhhHHHHHHHHHHHHHHhhcCcchhhhhHHHHH--HHHHHHHHHHhhcCCc--hhhhcc
Confidence 1111 0111111 1111222334433322222222211111211111111222 2223334444445552 137789
Q ss_pred CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017287 338 LAGHSHQIFHVFVVFGALAHYSATLVFLEWRDR 370 (374)
Q Consensus 338 ~~G~SHqiwHi~Vv~g~~~h~~a~~~~~~~r~~ 370 (374)
+|.+||+..+--+...+..+..+.+.+..
T Consensus 287 ----AHALWHlaTIplt~~~~~Fv~~d~~~~t~ 315 (319)
T KOG2970|consen 287 ----AHALWHLATIPLTILWYDFVSDDYDFATG 315 (319)
T ss_pred ----hHHHHHhhcCccHHHHHHHhhchhhhhcc
Confidence 99999999998888888888777766643
No 10
>PF13965 SID-1_RNA_chan: dsRNA-gated channel SID-1
Probab=91.04 E-value=4.3 Score=43.24 Aligned_cols=53 Identities=19% Similarity=0.314 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHHhHhhhhccC--------------CccCCCCcccCCCCchhHHHHHHHHHHHHHHHHHH
Q 017287 306 LAYESAMALFYLTGTMFYVTRI--------------PERWKPGWFDLAGHSHQIFHVFVVFGALAHYSATL 362 (374)
Q Consensus 306 l~~~l~~~~~y~~G~~fY~~r~--------------PEr~~PG~FD~~G~SHqiwHi~Vv~g~~~h~~a~~ 362 (374)
..++++..++...+..||-.+. =|+..||-|| +|.+||.+..+|..+-+..++
T Consensus 487 ~~~~~~~~~~W~~a~yff~~~~t~w~~tpA~SR~lN~~Cil~~f~D----~HDiwH~~SA~alffsf~~l~ 553 (570)
T PF13965_consen 487 IIYLVLAFVSWGFALYFFFQNTTDWTLTPAESRELNKECILLGFFD----WHDIWHFLSAIALFFSFLVLL 553 (570)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCccccChHhHHhcCCCCcCcCccc----cHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555666666663321 1334567788 999999999999877655544
No 11
>PF12036 DUF3522: Protein of unknown function (DUF3522); InterPro: IPR021910 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 220 to 787 amino acids in length.
Probab=84.24 E-value=4.6 Score=36.64 Aligned_cols=36 Identities=11% Similarity=0.069 Sum_probs=19.6
Q ss_pred HHHHHHHHhhhcccCc-H--HHHHHHHhhchhhhHHHhh
Q 017287 189 FCLLSSSICHLFCCHS-R--RLNILLLRIDYSGITVMII 224 (374)
Q Consensus 189 ~~~~~St~yH~f~~hS-~--~~~~~~~~lDy~GI~llI~ 224 (374)
..++.|+.||+-..-. + -.-.-|.++|+......+.
T Consensus 39 ~tm~~S~~YHacd~~~~~~~lc~~~~~~L~~~~~~~s~~ 77 (186)
T PF12036_consen 39 FTMFFSTFYHACDSGPGEIFLCIMDWHRLQNIDFIGSFL 77 (186)
T ss_pred HHHHHHHhcccccCCCCceEEeechHHHHHHHHHHHHHH
Confidence 5667999999975110 0 1223445556655444433
No 12
>KOG4255 consensus Uncharacterized conserved protein [Function unknown]
Probab=83.99 E-value=18 Score=36.05 Aligned_cols=24 Identities=25% Similarity=0.501 Sum_probs=18.6
Q ss_pred hhhhhhhhccchhhHHHHHHHHHh
Q 017287 273 FRALLFCSMGFFGFVPAIHAAIVN 296 (374)
Q Consensus 273 ~R~~~f~~~g~~~~~Pi~h~i~~~ 296 (374)
+-..+|+.||+++++|-+-.+..+
T Consensus 144 fL~afFvG~GLSaLlPsllaLaQG 167 (439)
T KOG4255|consen 144 FLNAFFVGMGLSALLPSLLALAQG 167 (439)
T ss_pred HHHHHHHhccHHHHHHHHHHHHcc
Confidence 345689999999999987666544
No 13
>COG5237 PER1 Predicted membrane protein [Function unknown]
Probab=62.74 E-value=1.5e+02 Score=28.45 Aligned_cols=47 Identities=19% Similarity=0.395 Sum_probs=29.8
Q ss_pred ecccCCchhhcCCcccCCccCCCCHHHHHHHhhhhcchhHHHHHHHHHHHHHHH
Q 017287 53 SFWELPEYMKDNEYVLHYYRANWPIKEALFSIFRWHNETLNVWTHLIGFIIFVA 106 (374)
Q Consensus 53 ~~~elP~~l~dN~yI~~GYR~~~s~~~cl~SlF~~HNETvNIWTHlig~i~f~~ 106 (374)
.-+++|.+++.-++ |+-+-....|=+--+|.+ +|.=+|.+|+..+.-
T Consensus 78 ~~~n~~~~q~hGkW---~F~rVlG~qEfFS~~FS~----~Nfi~hy~gfh~m~r 124 (319)
T COG5237 78 NSGNIKIYQRHGKW---GFQRVLGMQEFFSALFSF----MNFITHYIGFHRMLR 124 (319)
T ss_pred ccCCchhhhhcCcc---ceeeehhHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 34566666655322 333335566666667776 788899999887653
No 14
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=36.34 E-value=1.4e+02 Score=32.16 Aligned_cols=22 Identities=23% Similarity=0.267 Sum_probs=18.6
Q ss_pred HHHHHHhhchhhhHHHhhhcch
Q 017287 207 LNILLLRIDYSGITVMIITSFF 228 (374)
Q Consensus 207 ~~~~~~~lDy~GI~llI~gs~~ 228 (374)
.++.+.++|+.|++++++|-..
T Consensus 232 ~~~~l~~lD~IG~~L~~~Gl~L 253 (599)
T PF06609_consen 232 KREQLKELDWIGIFLFIAGLAL 253 (599)
T ss_pred HHHHHHHhhHHHHHHHHHHHHH
Confidence 4677999999999999998644
No 15
>PF10348 DUF2427: Domain of unknown function (DUF2427); InterPro: IPR018825 This entry represents the N-terminal region of a family of proteins conserved in fungi. Several of these proteins are annotated as being Ftp1 but this could not be confirmed. Their function is not known.
Probab=31.26 E-value=2.9e+02 Score=22.52 Aligned_cols=31 Identities=13% Similarity=0.230 Sum_probs=22.3
Q ss_pred hhhccCCccCCCCcccCCCCchhHHHHHHHHHHHHHHH
Q 017287 322 FYVTRIPERWKPGWFDLAGHSHQIFHVFVVFGALAHYS 359 (374)
Q Consensus 322 fY~~r~PEr~~PG~FD~~G~SHqiwHi~Vv~g~~~h~~ 359 (374)
.|..+.|| +.|| +.|+.+=..+..-.+.|..
T Consensus 67 ~~~~~~p~-lyp~------n~H~k~g~il~~l~~~q~~ 97 (105)
T PF10348_consen 67 VYNGSTPD-LYPN------NAHGKMGWILFVLMIVQVI 97 (105)
T ss_pred HHhcCCCC-CCCC------CHHHHHHHHHHHHHHHHHH
Confidence 47778898 6675 7888887777666666655
No 16
>PF03839 Sec62: Translocation protein Sec62; InterPro: IPR004728 Members of the NSCC2 family have been sequenced from various yeast, fungal and animals species including Saccharomyces cerevisiae, Drosophila melanogaster and Homo sapiens. These proteins are the Sec62 proteins, believed to be associated with the Sec61 and Sec63 constituents of the general protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins have been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.; GO: 0008565 protein transporter activity, 0015031 protein transport, 0016021 integral to membrane
Probab=29.17 E-value=1.5e+02 Score=27.80 Aligned_cols=17 Identities=24% Similarity=0.540 Sum_probs=10.1
Q ss_pred chh-hhhhhhccchhhHH
Q 017287 272 AFR-ALLFCSMGFFGFVP 288 (374)
Q Consensus 272 ~~R-~~~f~~~g~~~~~P 288 (374)
++| .+.|+++|+.|++-
T Consensus 134 ~~r~gv~YlS~~~lgll~ 151 (224)
T PF03839_consen 134 WMRQGVYYLSVGALGLLG 151 (224)
T ss_pred HHhheeehhHHHHHHHHH
Confidence 444 45677777666553
No 17
>TIGR00869 sec62 protein translocation protein, Sec62 family. protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins has been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.
Probab=28.13 E-value=1.2e+02 Score=28.61 Aligned_cols=14 Identities=21% Similarity=0.517 Sum_probs=9.2
Q ss_pred hhhhhhccchhhHH
Q 017287 275 ALLFCSMGFFGFVP 288 (374)
Q Consensus 275 ~~~f~~~g~~~~~P 288 (374)
.+.|+++|+.|++-
T Consensus 146 gv~YlS~~~lgll~ 159 (232)
T TIGR00869 146 GSWYLSLGALGIIG 159 (232)
T ss_pred hHHHHHHHHHHHHH
Confidence 46678887766553
No 18
>PF14619 SnAC: Snf2-ATP coupling, chromatin remodelling complex
Probab=27.07 E-value=25 Score=26.94 Aligned_cols=18 Identities=28% Similarity=0.416 Sum_probs=15.1
Q ss_pred cccceecccCCchhhcCC
Q 017287 48 RYGLVSFWELPEYMKDNE 65 (374)
Q Consensus 48 ~~~L~~~~elP~~l~dN~ 65 (374)
..+|+.-+|||+|++.+.
T Consensus 17 p~RLm~e~ELPe~~~~d~ 34 (74)
T PF14619_consen 17 PSRLMEESELPEWYREDI 34 (74)
T ss_pred CccccchhhchHHHHhcc
Confidence 459999999999988643
No 19
>KOG2927 consensus Membrane component of ER protein translocation complex [Intracellular trafficking, secretion, and vesicular transport]
Probab=25.80 E-value=1.2e+02 Score=30.43 Aligned_cols=18 Identities=33% Similarity=0.663 Sum_probs=11.5
Q ss_pred cchh-hhhhhhccchhhHH
Q 017287 271 RAFR-ALLFCSMGFFGFVP 288 (374)
Q Consensus 271 r~~R-~~~f~~~g~~~~~P 288 (374)
+++| .+.|+.+|..|++-
T Consensus 212 ~~mR~gvyY~sig~~gfl~ 230 (372)
T KOG2927|consen 212 RRMRQGVYYLSIGAGGFLA 230 (372)
T ss_pred HHHhcceeeeecchhHHHH
Confidence 4455 46677777777664
No 20
>KOG3059 consensus N-acetylglucosaminyltransferase complex, subunit PIG-C/GPI2, required for phosphatidylinositol biosynthesis [Lipid transport and metabolism]
Probab=24.10 E-value=6.8e+02 Score=24.41 Aligned_cols=83 Identities=12% Similarity=0.183 Sum_probs=46.9
Q ss_pred hhhhhhhhccchhhHHHHHHHHHhcCCCc-chhHHHHHHHH------------------HHHHHHhHhhhhccCCccCCC
Q 017287 273 FRALLFCSMGFFGFVPAIHAAIVNWSNPK-RDITLAYESAM------------------ALFYLTGTMFYVTRIPERWKP 333 (374)
Q Consensus 273 ~R~~~f~~~g~~~~~Pi~h~i~~~~~~~~-~~~~l~~~l~~------------------~~~y~~G~~fY~~r~PEr~~P 333 (374)
++..+.+..++.++-|+++.+........ -..+++..+.. .-.+..+.+++++|.|.+
T Consensus 118 lks~~~vt~~ly~lsPVl~TLt~SiSsDsI~a~sv~l~L~~~ff~~y~~s~~~vs~~lS~na~v~~sv~LaSRl~~~--- 194 (292)
T KOG3059|consen 118 LKSIFTVTLFLYGLSPVLKTLTKSISSDSIWAMSVWLLLGNLFFHDYGISTIRVSGPLSLNAAVSASVLLASRLEKS--- 194 (292)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHhcCCcchHHHHHHHHHHHHHhcccccccccccCCcchHHHHHHHHHHHHHhcCCc---
Confidence 45566666667777777765543321110 01112222111 134567889999998753
Q ss_pred CcccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 017287 334 GWFDLAGHSHQIFHVFVVFGALAHYSATLVFLEWRDR 370 (374)
Q Consensus 334 G~FD~~G~SHqiwHi~Vv~g~~~h~~a~~~~~~~r~~ 370 (374)
+|+|.++-..+|..+++-.+..|-.
T Consensus 195 ------------~~vF~fllfai~~~al~p~~~~~i~ 219 (292)
T KOG3059|consen 195 ------------IHVFNFLLFAIQLFALLPNFRKRIK 219 (292)
T ss_pred ------------hHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4566666666677777766666654
No 21
>COG4323 Predicted membrane protein [Function unknown]
Probab=22.77 E-value=68 Score=25.49 Aligned_cols=67 Identities=13% Similarity=0.289 Sum_probs=39.6
Q ss_pred HHHHHHHHhhchhhhHHHhhhcchhHhhHhhccCchhHHHHHHHHHHHHHHHHHHHhccccc--cCcccchhhhhhhhcc
Q 017287 205 RRLNILLLRIDYSGITVMIITSFFPPIYYIFQCEPRWHFIYLGGVTALGIFTIVTLLSPALS--AGKFRAFRALLFCSMG 282 (374)
Q Consensus 205 ~~~~~~~~~lDy~GI~llI~gs~~p~~yy~f~c~~~~~~~y~~~i~~l~l~~i~~~l~~~~~--~~~~r~~R~~~f~~~g 282 (374)
+....+|+|+.+.|-.+.++.-.. -.| .+.|+|.. ...++|....+.--|- +.|...+|.-+|..||
T Consensus 22 EH~N~vcRRLH~vGs~LvlvcL~~----~Vf--~~~w~wll-----Aapv~GYgFAWvGHFvFEKNRPATFkyPvySlMG 90 (105)
T COG4323 22 EHANPVCRRLHVVGSSLVLVCLVL----GVF--RGDWRWLL-----AAPVIGYGFAWVGHFVFEKNRPATFKYPVYSLMG 90 (105)
T ss_pred hccchhHhhhhhhhhHHHHHHHHH----HHH--hcchHHHH-----HhhhhcccceeeeeeeeecCCCccccccHHHhhc
Confidence 455678999999998888765322 223 34565532 3444555444443333 3344457777787777
No 22
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=21.41 E-value=1.7e+02 Score=24.26 Aligned_cols=26 Identities=12% Similarity=0.368 Sum_probs=15.2
Q ss_pred HHHHhHhhhhccCCccCCCCcccCCCC
Q 017287 315 FYLTGTMFYVTRIPERWKPGWFDLAGH 341 (374)
Q Consensus 315 ~y~~G~~fY~~r~PEr~~PG~FD~~G~ 341 (374)
.|++..++.... =|+..|-++|+.|.
T Consensus 66 vfI~~Sl~W~w~-vdg~~Pd~~D~iGa 91 (107)
T PF02694_consen 66 VFIVASLLWGWL-VDGVRPDRWDWIGA 91 (107)
T ss_pred hHHHHHHHHHhh-hcCcCCChHHHHhH
Confidence 345555555443 35666777787774
No 23
>PRK02237 hypothetical protein; Provisional
Probab=21.28 E-value=1.8e+02 Score=24.08 Aligned_cols=25 Identities=20% Similarity=0.563 Sum_probs=12.3
Q ss_pred HHHhHhhhhccCCccCCCCcccCCCC
Q 017287 316 YLTGTMFYVTRIPERWKPGWFDLAGH 341 (374)
Q Consensus 316 y~~G~~fY~~r~PEr~~PG~FD~~G~ 341 (374)
|++..++.... =|+..|-+.|+.|.
T Consensus 69 yI~~Sl~W~w~-vdg~~Pd~~D~iGa 93 (109)
T PRK02237 69 YVAGSLLWLWV-VDGVRPDRWDWIGA 93 (109)
T ss_pred HHHHHHHHHHH-hcCcCCChhHHHhH
Confidence 44444444332 24555666666663
Done!