Your job contains 1 sequence.
>017290
MGSTEGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKK
NEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTM
ISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASE
ELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTR
SFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGV
RGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQA
PVQLGSLRAADGKE
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 017290
(374 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2150441 - symbol:GME ""GDP-D-mannose 3',5'-epi... 1834 3.3e-189 1
TIGR_CMR|GSU_1815 - symbol:GSU_1815 "NAD-dependent epimer... 300 1.2e-26 1
ZFIN|ZDB-GENE-020419-37 - symbol:uxs1 "UDP-glucuronic aci... 300 1.2e-26 1
UNIPROTKB|E1BMI4 - symbol:UXS1 "Uncharacterized protein" ... 292 8.4e-26 1
UNIPROTKB|B3KV61 - symbol:UXS1 "UDP-glucuronate decarboxy... 292 8.4e-26 1
UNIPROTKB|Q8NBZ7 - symbol:UXS1 "UDP-glucuronic acid decar... 292 8.4e-26 1
UNIPROTKB|F1SU22 - symbol:UXS1 "Uncharacterized protein" ... 292 8.4e-26 1
MGI|MGI:1915133 - symbol:Uxs1 "UDP-glucuronate decarboxyl... 292 8.4e-26 1
RGD|628680 - symbol:Uxs1 "UDP-glucuronate decarboxylase 1... 292 8.4e-26 1
UNIPROTKB|Q5PQX0 - symbol:Uxs1 "UDP-glucuronic acid decar... 292 8.4e-26 1
UNIPROTKB|E1BV28 - symbol:UXS1 "Uncharacterized protein" ... 290 1.4e-25 1
TIGR_CMR|BA_0507 - symbol:BA_0507 "NAD-dependent epimeras... 290 1.4e-25 1
TAIR|locus:2081675 - symbol:AUD1 "AT3G62830" species:3702... 291 1.6e-25 1
UNIPROTKB|F1PU61 - symbol:UXS1 "Uncharacterized protein" ... 287 2.9e-25 1
TIGR_CMR|GSU_0627 - symbol:GSU_0627 "GDP-fucose synthetas... 280 1.6e-24 1
TAIR|locus:2053275 - symbol:UXS6 "UDP-XYL synthase 6" spe... 272 1.1e-23 1
TAIR|locus:2078206 - symbol:UXS5 "UDP-XYL synthase 5" spe... 271 1.4e-23 1
TIGR_CMR|CJE_1513 - symbol:CJE_1513 "NAD-dependent epimer... 270 1.8e-23 1
TAIR|locus:2168539 - symbol:UXS3 "UDP-glucuronic acid dec... 262 1.3e-22 1
FB|FBgn0035848 - symbol:CG7979 species:7227 "Drosophila m... 270 3.2e-22 1
WB|WBGene00005019 - symbol:sqv-1 species:6239 "Caenorhabd... 268 9.1e-22 1
TAIR|locus:2030973 - symbol:GER2 species:3702 "Arabidopsi... 251 1.9e-21 1
TIGR_CMR|CHY_0979 - symbol:CHY_0979 "dTDP-glucose 4,6-deh... 241 3.0e-20 1
TIGR_CMR|DET_0204 - symbol:DET_0204 "NAD-dependent epimer... 241 3.0e-20 1
TAIR|locus:2197264 - symbol:GER1 ""GDP-4-keto-6-deoxymann... 239 5.2e-20 1
UNIPROTKB|Q6MWV3 - symbol:galE1 "UDP-glucose 4-epimerase"... 234 2.0e-19 1
UNIPROTKB|P32055 - symbol:fcl "Fcl" species:83333 "Escher... 235 3.0e-19 1
TIGR_CMR|CBU_0829 - symbol:CBU_0829 "NAD dependent epimer... 236 1.3e-18 1
TIGR_CMR|CBU_0677 - symbol:CBU_0677 "NAD dependent epimer... 222 2.1e-16 1
TAIR|locus:2202960 - symbol:RHM1 "rhamnose biosynthesis 1... 218 5.1e-15 1
TAIR|locus:2050921 - symbol:GAE4 "UDP-D-glucuronate 4-epi... 213 7.5e-15 1
TIGR_CMR|CJE_1612 - symbol:CJE_1612 "GDP-L-fucose synthet... 142 1.2e-14 2
TAIR|locus:2099372 - symbol:RHM3 "rhamnose biosynthesis 3... 214 1.4e-14 1
UNIPROTKB|P95780 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 204 3.7e-14 1
UNIPROTKB|Q489C2 - symbol:CPS_0592 "Capsular polysacchari... 193 3.9e-14 2
TIGR_CMR|CPS_0592 - symbol:CPS_0592 "capsular polysacchar... 193 3.9e-14 2
TIGR_CMR|CBU_0844 - symbol:CBU_0844 "capsular polysacchar... 202 5.7e-14 1
UNIPROTKB|F1RP60 - symbol:TGDS "Uncharacterized protein" ... 201 9.2e-14 1
TAIR|locus:2024902 - symbol:MUM4 "MUCILAGE-MODIFIED 4" sp... 203 2.6e-13 1
UNIPROTKB|Q0BYW6 - symbol:HNE_2639 "UDP-glucuronate 5'-ep... 192 8.2e-13 1
TAIR|locus:2126846 - symbol:GAE3 "UDP-D-glucuronate 4-epi... 195 8.6e-13 1
TAIR|locus:2139134 - symbol:GAE5 "UDP-D-glucuronate 4-epi... 194 1.2e-12 1
UNIPROTKB|P29782 - symbol:strE "dTDP-glucose 4,6-dehydrat... 178 1.7e-12 2
UNIPROTKB|Q47WH1 - symbol:CPS_4200 "NAD-dependent epimera... 188 1.8e-12 1
TIGR_CMR|CPS_4200 - symbol:CPS_4200 "NAD-dependent epimer... 188 1.8e-12 1
TIGR_CMR|GSU_2241 - symbol:GSU_2241 "capsular polysacchar... 189 1.9e-12 1
TAIR|locus:2025472 - symbol:GAE2 "UDP-D-glucuronate 4-epi... 192 2.0e-12 1
UNIPROTKB|E2QWQ8 - symbol:TGDS "Uncharacterized protein" ... 189 2.4e-12 1
WB|WBGene00015298 - symbol:C01F1.3 species:6239 "Caenorha... 192 4.2e-12 1
UNIPROTKB|O95455 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 184 8.7e-12 1
UNIPROTKB|Q8E8H8 - symbol:wcvA "UDP-glucuronate 4-epimera... 182 1.3e-11 1
TIGR_CMR|SO_4686 - symbol:SO_4686 "NAD dependent epimeras... 182 1.3e-11 1
MGI|MGI:1923605 - symbol:Tgds "TDP-glucose 4,6-dehydratas... 182 1.6e-11 1
DICTYBASE|DDB_G0279465 - symbol:tgds "putative dTDP-D-glu... 172 1.6e-11 2
UNIPROTKB|A6QLW2 - symbol:TGDS "dTDP-D-glucose 4,6-dehydr... 181 2.0e-11 1
TIGR_CMR|BA_5505 - symbol:BA_5505 "UDP-glucose 4-epimeras... 180 2.1e-11 1
UNIPROTKB|Q8ECF3 - symbol:wbpP "UDP-GlkcNAc C4 epimerase ... 179 3.0e-11 1
TIGR_CMR|SO_3189 - symbol:SO_3189 "polysaccharide biosynt... 179 3.0e-11 1
UNIPROTKB|Q47Y09 - symbol:CPS_3643 "NAD-dependent epimera... 179 3.1e-11 1
TIGR_CMR|CPS_3643 - symbol:CPS_3643 "NAD-dependent epimer... 179 3.1e-11 1
TIGR_CMR|CBU_0688 - symbol:CBU_0688 "GDP-fucose synthetas... 178 3.6e-11 1
UNIPROTKB|F1P029 - symbol:TGDS "Uncharacterized protein" ... 174 1.4e-10 1
TIGR_CMR|CJE_1287 - symbol:CJE_1287 "ADP-L-glycero-D-mann... 172 1.5e-10 1
TAIR|locus:2118711 - symbol:GAE1 "UDP-D-glucuronate 4-epi... 175 1.6e-10 1
TIGR_CMR|GSU_1975 - symbol:GSU_1975 "NAD-dependent epimer... 171 2.5e-10 1
WB|WBGene00018737 - symbol:F53B1.4 species:6239 "Caenorha... 171 2.6e-10 1
RGD|1306544 - symbol:Tgds "TDP-glucose 4,6-dehydratase" s... 170 3.8e-10 1
TIGR_CMR|GSU_2240 - symbol:GSU_2240 "UDP-glucose 4-epimer... 165 1.1e-09 1
ZFIN|ZDB-GENE-030131-5718 - symbol:tgds "TDP-glucose 4,6-... 164 1.7e-09 1
UNIPROTKB|B4E3U7 - symbol:UXS1 "cDNA FLJ57788, highly sim... 144 2.2e-09 1
UNIPROTKB|C9JE50 - symbol:UXS1 "UDP-glucuronic acid decar... 144 2.2e-09 1
TAIR|locus:2076066 - symbol:GAE6 "UDP-D-glucuronate 4-epi... 163 4.3e-09 1
UNIPROTKB|B0RVL0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 157 1.1e-08 1
UNIPROTKB|A0QSK6 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 154 2.1e-08 1
UNIPROTKB|Q9S642 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 151 5.1e-08 1
UNIPROTKB|P0C7J0 - symbol:rfbB "dTDP-glucose 4,6-dehydrat... 151 5.4e-08 1
UNIPROTKB|O06329 - symbol:rmlB "dTDP-glucose 4,6-dehydrat... 150 6.1e-08 1
UNIPROTKB|P55294 - symbol:rfbB1 "dTDP-glucose 4,6-dehydra... 150 7.2e-08 1
TIGR_CMR|BA_1230 - symbol:BA_1230 "dTDP-glucose 4,6-dehyd... 143 3.6e-07 1
UNIPROTKB|Q83DM2 - symbol:CBU_0681 "NAD dependent epimera... 128 4.5e-07 2
TIGR_CMR|CBU_0681 - symbol:CBU_0681 "conserved hypothetic... 128 4.5e-07 2
UNIPROTKB|Q888H1 - symbol:udh "Uncharacterized protein" s... 140 5.1e-07 1
UNIPROTKB|Q48N10 - symbol:PSPPH_0937 "Uncharacterized pro... 139 6.6e-07 1
UNIPROTKB|P44914 - symbol:rffG "dTDP-glucose 4,6-dehydrat... 141 6.7e-07 1
UNIPROTKB|C9JW33 - symbol:UXS1 "UDP-glucuronic acid decar... 131 6.8e-07 1
UNIPROTKB|C9JCB7 - symbol:UXS1 "UDP-glucuronic acid decar... 121 7.0e-07 1
TIGR_CMR|SO_3167 - symbol:SO_3167 "dTDP-glucose 4,6-dehyd... 140 9.1e-07 1
DICTYBASE|DDB_G0281487 - symbol:DDB_G0281487 "3-beta-hydr... 131 9.7e-07 2
CGD|CAL0000450 - symbol:GAL102 species:5476 "Candida albi... 139 1.0e-06 1
UNIPROTKB|Q59VY4 - symbol:TGD99 "Putative uncharacterized... 139 1.0e-06 1
TIGR_CMR|CBU_0676 - symbol:CBU_0676 "NAD dependent epimer... 139 1.1e-06 1
UNIPROTKB|Q9HTB6 - symbol:rmd "GDP-6-deoxy-D-mannose redu... 131 1.7e-06 2
TAIR|locus:2057786 - symbol:3BETAHSD/D2 "3beta-hydroxyste... 120 2.3e-06 2
GENEDB_PFALCIPARUM|PF10_0137 - symbol:PF10_0137 "GDP-fuco... 136 2.3e-06 1
UNIPROTKB|Q8IJQ5 - symbol:PF10_0137 "GDP-fucose synthase,... 136 2.3e-06 1
WB|WBGene00022498 - symbol:hsd-2 species:6239 "Caenorhabd... 134 3.0e-06 2
UNIPROTKB|P67910 - symbol:rfaD "ADP-L-glycero-D-mannohept... 134 3.4e-06 1
ZFIN|ZDB-GENE-050417-317 - symbol:zgc:110348 "zgc:110348"... 135 3.6e-06 1
TIGR_CMR|BA_3248 - symbol:BA_3248 "3-beta hydroxysteroid ... 119 4.4e-06 2
UNIPROTKB|Q9ZAE8 - symbol:acbB "dTDP-glucose 4,6-dehydrat... 121 4.7e-06 2
WARNING: Descriptions of 51 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2150441 [details] [associations]
symbol:GME ""GDP-D-mannose 3',5'-epimerase"" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0047918 "GDP-mannose 3,5-epimerase activity" evidence=ISS;IDA]
[GO:0019853 "L-ascorbic acid biosynthetic process" evidence=TAS]
[GO:0051287 "NAD binding" evidence=TAS] [GO:0005829 "cytosol"
evidence=IDA] UniPathway:UPA00990 InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0451 Gene3D:3.40.50.720
GO:GO:0051287 GO:GO:0019853 EMBL:AF272706 EMBL:AY057660
EMBL:AY057694 EMBL:AY116953 IPI:IPI00536932 RefSeq:NP_001190417.1
RefSeq:NP_198236.1 UniGene:At.21733 PDB:2C54 PDB:2C59 PDB:2C5A
PDB:2C5E PDBsum:2C54 PDBsum:2C59 PDBsum:2C5A PDBsum:2C5E
ProteinModelPortal:Q93VR3 SMR:Q93VR3 STRING:Q93VR3 PaxDb:Q93VR3
PRIDE:Q93VR3 EnsemblPlants:AT5G28840.1 EnsemblPlants:AT5G28840.2
GeneID:833002 KEGG:ath:AT5G28840 TAIR:At5g28840
HOGENOM:HOG000168017 InParanoid:Q93VR3 KO:K10046 OMA:RKAQTST
PhylomeDB:Q93VR3 ProtClustDB:PLN02695 BioCyc:ARA:AT5G28840-MONOMER
BioCyc:MetaCyc:AT5G28840-MONOMER EvolutionaryTrace:Q93VR3
Genevestigator:Q93VR3 GermOnline:AT5G28840 GO:GO:0047918
Uniprot:Q93VR3
Length = 377
Score = 1834 (650.7 bits), Expect = 3.3e-189, P = 3.3e-189
Identities = 341/377 (90%), Positives = 363/377 (96%)
Query: 1 MGSTEGT-YGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWK 59
MG+T GT YGAYTY+ELERE YWPSE L+IS+TGAGGFIASHIARRLK EGHY+IASDWK
Sbjct: 1 MGTTNGTDYGAYTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWK 60
Query: 60 KNEHMTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 119
KNEHMTEDMFC EFHLVDLRVM+NCLKVT+GVDHVFNLAADMGGMGFIQSNHSVIMYNNT
Sbjct: 61 KNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNT 120
Query: 120 MISFNMLEASRISGVKRFFYASSACIYPEFKQLET-NVSLKESDAWPAEPQDAYGLEKLA 178
MISFNM+EA+RI+G+KRFFYASSACIYPEFKQLET NVSLKESDAWPAEPQDAYGLEKLA
Sbjct: 121 MISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLA 180
Query: 179 SEELCKHYTKDFGIECRVGRFHNIYGPFGTWKG-MEKAPAAFCRKALTSTDKFEMWGDGL 237
+EELCKHY KDFGIECR+GRFHNIYGPFGTWKG EKAPAAFCRKA TSTD+FEMWGDGL
Sbjct: 181 TEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL 240
Query: 238 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP 297
QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAE+VLSFE+KKLPIHHIPGP
Sbjct: 241 QTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGP 300
Query: 298 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVG 357
EGVRGRNSDN LIKEKLGWAP+M+LK+GLRITYFWIKEQIEKEK +G D+S+YGSSKVVG
Sbjct: 301 EGVRGRNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQIEKEKAKGSDVSLYGSSKVVG 360
Query: 358 TQAPVQLGSLRAADGKE 374
TQAPVQLGSLRAADGKE
Sbjct: 361 TQAPVQLGSLRAADGKE 377
>TIGR_CMR|GSU_1815 [details] [associations]
symbol:GSU_1815 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 KO:K01710
HOGENOM:HOG000168004 OMA:LGHENFE RefSeq:NP_952865.1
ProteinModelPortal:Q74C60 GeneID:2686299 KEGG:gsu:GSU1815
PATRIC:22026487 ProtClustDB:CLSK828578
BioCyc:GSUL243231:GH27-1866-MONOMER Uniprot:Q74C60
Length = 311
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 92/312 (29%), Positives = 146/312 (46%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD-WKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
+RI VTG GFI SH+ RL +GH ++ D + D +FH ++ D
Sbjct: 1 MRILVTGGAGFIGSHLCERLLEQGHDVLCLDNFFTGSKRNIDRLM-DFHRFEVIRHDIIE 59
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLE-ASRISGVKRFFYASSAC 144
+ VD ++NLA + + Q N + + M + NML A R+ R AS++
Sbjct: 60 PILLEVDRIYNLACPASPVHY-QYNPVKTIKTSVMGTINMLGLAKRVRA--RILQASTSE 116
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+Y + + + P + Y K +E L Y + G++ R+ R N YG
Sbjct: 117 VYGD-PTIHPQPESYWGNVNPIGIRSCYDEGKRVAETLLMDYHRQNGVDIRIARIFNTYG 175
Query: 205 P-FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD-FRE 262
P G + + F +AL D ++GDG QTRSF ++D+ ++G++ L + D F
Sbjct: 176 PRMAEHDG--RVVSNFVVQALRGED-LTVYGDGSQTRSFCYVDDLLDGLVTLMEHDQFCG 232
Query: 263 PVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGP-EGVRGRNSDNTLIKEKLGWAPSMK 321
PVN+G+ E + E A +++ I + P P + R R D TL + LGW P +
Sbjct: 233 PVNLGNPEETPIIEFARRIIAMTGSSSQIIYRPLPSDDPRQRQPDITLARTILGWEPRVS 292
Query: 322 LKDGLR--ITYF 331
L +GL I YF
Sbjct: 293 LDEGLAKTIEYF 304
>ZFIN|ZDB-GENE-020419-37 [details] [associations]
symbol:uxs1 "UDP-glucuronic acid decarboxylase 1"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0051216 "cartilage
development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
[GO:0030206 "chondroitin sulfate biosynthetic process"
evidence=IMP] [GO:0015012 "heparan sulfate proteoglycan
biosynthetic process" evidence=IGI;IMP] [GO:0030198 "extracellular
matrix organization" evidence=IGI;IMP] [GO:0050650 "chondroitin
sulfate proteoglycan biosynthetic process" evidence=IGI;IMP]
[GO:0016831 "carboxy-lyase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0032580
"Golgi cisterna membrane" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 ZFIN:ZDB-GENE-020419-37 GO:GO:0016021
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0030198 GO:GO:0032580 GO:GO:0051216 GO:GO:0001503
GO:GO:0015012 GO:GO:0030206 GeneTree:ENSGT00530000063128
EMBL:AF506235 EMBL:BC074058 IPI:IPI00494152 RefSeq:NP_775349.1
UniGene:Dr.79684 ProteinModelPortal:Q6GMI9 SMR:Q6GMI9 STRING:Q6GMI9
Ensembl:ENSDART00000078525 GeneID:192315 KEGG:dre:192315 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 InParanoid:Q6GMI9 KO:K08678
OrthoDB:EOG4ZW5B0 NextBio:20797152 ArrayExpress:Q6GMI9 Bgee:Q6GMI9
GO:GO:0048040 GO:GO:0033320 Uniprot:Q6GMI9
Length = 418
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 89/326 (27%), Positives = 157/326 (48%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 85 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 144
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 145 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 199
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 200 TSEVYGD-----PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 254
Query: 198 RFHNIYGPFGTWKGME--KAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
R I+ FG+ M + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 255 R---IFNTFGSRMHMNDGRVVSNFILQALQG-EALTVYGSGSQTRAFQYVSDLVNGLVSL 310
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKL 314
S+ PVN+G+ E ++ E A+++ S + I +P + + R D K L
Sbjct: 311 MNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQRRRPDIRKAKLLL 370
Query: 315 GWAPSMKLKDGLRITYFWIKEQIEKE 340
GW P + L++GL T + ++E +
Sbjct: 371 GWEPVVPLEEGLNKTIQYFSRELEHQ 396
>UNIPROTKB|E1BMI4 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 GeneTree:ENSGT00530000063128 CTD:80146
KO:K08678 GO:GO:0048040 OMA:LGHENFE EMBL:DAAA02031058
EMBL:DAAA02031059 EMBL:DAAA02031060 IPI:IPI00712240
RefSeq:NP_001192993.1 UniGene:Bt.57545 ProteinModelPortal:E1BMI4
Ensembl:ENSBTAT00000007374 GeneID:534788 KEGG:bta:534788
NextBio:20876532 Uniprot:E1BMI4
Length = 420
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 86/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI VTG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILVTGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQTEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 314
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 315 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 375 EPVVPLEEGLNKAIHYFRKELE 396
>UNIPROTKB|B3KV61 [details] [associations]
symbol:UXS1 "UDP-glucuronate decarboxylase 1, isoform
CRA_a" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CH471127 GO:GO:0044237 EMBL:AC018878 HOVERGEN:HBG094144
GO:GO:0048040 IPI:IPI00658111 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK122696 SMR:B3KV61 STRING:B3KV61 Ensembl:ENST00000540130
Uniprot:B3KV61
Length = 363
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 30 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 89
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 90 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 144
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 145 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 199
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 200 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 257
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 258 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 317
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 318 EPVVPLEEGLNKAIHYFRKELE 339
>UNIPROTKB|Q8NBZ7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032580 "Golgi cisterna membrane"
evidence=IEA] [GO:0033320 "UDP-D-xylose biosynthetic process"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 UniPathway:UPA00796 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005739 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0032580 EMBL:AC018878 CTD:80146
HOGENOM:HOG000168004 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AY147934 EMBL:AY358541 EMBL:AK027244
EMBL:AK075120 EMBL:AK075170 EMBL:BC009819 IPI:IPI00410544
IPI:IPI00657807 IPI:IPI00658111 RefSeq:NP_001240804.1
RefSeq:NP_001240805.1 RefSeq:NP_079352.2 UniGene:Hs.469561 PDB:2B69
PDB:4GLL PDBsum:2B69 PDBsum:4GLL ProteinModelPortal:Q8NBZ7
SMR:Q8NBZ7 IntAct:Q8NBZ7 STRING:Q8NBZ7 PhosphoSite:Q8NBZ7
DMDM:74730150 PaxDb:Q8NBZ7 PRIDE:Q8NBZ7 DNASU:80146
Ensembl:ENST00000283148 Ensembl:ENST00000409032
Ensembl:ENST00000409501 GeneID:80146 KEGG:hsa:80146 UCSC:uc002tdl.3
UCSC:uc002tdn.3 GeneCards:GC02M106709 H-InvDB:HIX0030285
HGNC:HGNC:17729 HPA:HPA008825 MIM:609749 neXtProt:NX_Q8NBZ7
PharmGKB:PA38465 OMA:LGHENFE EvolutionaryTrace:Q8NBZ7
GenomeRNAi:80146 NextBio:70422 ArrayExpress:Q8NBZ7 Bgee:Q8NBZ7
CleanEx:HS_UXS1 Genevestigator:Q8NBZ7 GermOnline:ENSG00000115652
Uniprot:Q8NBZ7
Length = 420
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 314
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 315 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 375 EPVVPLEEGLNKAIHYFRKELE 396
>UNIPROTKB|F1SU22 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0048040 "UDP-glucuronate
decarboxylase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:CU929826 Ensembl:ENSSSCT00000008920 Uniprot:F1SU22
Length = 397
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 64 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 123
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 124 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 178
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 179 TSEVYGD-----PEVHPQTEDYWGHVNPVGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 233
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 234 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 291
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 292 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 351
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 352 EPVVPLEEGLNKAIHYFRKELE 373
>MGI|MGI:1915133 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016829 "lyase activity"
evidence=IEA] [GO:0016831 "carboxy-lyase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 MGI:MGI:1915133 GO:GO:0016021 GO:GO:0005739
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 GeneTree:ENSGT00530000063128 CTD:80146
HOVERGEN:HBG094144 KO:K08678 OrthoDB:EOG4ZW5B0 GO:GO:0048040
GO:GO:0033320 OMA:LGHENFE EMBL:AF399958 EMBL:AK075806 EMBL:AK152376
EMBL:BC037049 IPI:IPI00129252 RefSeq:NP_080706.1 UniGene:Mm.387202
ProteinModelPortal:Q91XL3 SMR:Q91XL3 STRING:Q91XL3
PhosphoSite:Q91XL3 PaxDb:Q91XL3 PRIDE:Q91XL3
Ensembl:ENSMUST00000126008 GeneID:67883 KEGG:mmu:67883
UCSC:uc007avq.1 InParanoid:Q91XL3 NextBio:325829 Bgee:Q91XL3
CleanEx:MM_UXS1 Genevestigator:Q91XL3 GermOnline:ENSMUSG00000057363
Uniprot:Q91XL3
Length = 420
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 314
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 315 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 375 EPVVPLEEGLNKAIHYFRKELE 396
>RGD|628680 [details] [associations]
symbol:Uxs1 "UDP-glucuronate decarboxylase 1" species:10116
"Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0032580 "Golgi cisterna membrane" evidence=IEA] [GO:0033320
"UDP-D-xylose biosynthetic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IDA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 UniPathway:UPA00796
InterPro:IPR016040 RGD:628680 GO:GO:0016021 GO:GO:0005794
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0032580
CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040 GO:GO:0033320
EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702 RefSeq:NP_647552.1
UniGene:Rn.3037 ProteinModelPortal:Q5PQX0 SMR:Q5PQX0 PRIDE:Q5PQX0
GeneID:246232 KEGG:rno:246232 NextBio:623518 Genevestigator:Q5PQX0
Uniprot:Q5PQX0
Length = 420
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 314
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 315 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 375 EPVVPLEEGLNKAIHYFRKELE 396
>UNIPROTKB|Q5PQX0 [details] [associations]
symbol:Uxs1 "UDP-glucuronic acid decarboxylase 1"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
UniPathway:UPA00796 InterPro:IPR016040 RGD:628680 GO:GO:0016021
GO:GO:0005794 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0032580 CTD:80146 HOVERGEN:HBG094144 KO:K08678 GO:GO:0048040
GO:GO:0033320 EMBL:AF482705 EMBL:BC086988 IPI:IPI00480702
RefSeq:NP_647552.1 UniGene:Rn.3037 ProteinModelPortal:Q5PQX0
SMR:Q5PQX0 PRIDE:Q5PQX0 GeneID:246232 KEGG:rno:246232
NextBio:623518 Genevestigator:Q5PQX0 Uniprot:Q5PQX0
Length = 420
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 85/322 (26%), Positives = 153/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 147 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 201
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 202 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 256
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 257 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 314
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K LGW
Sbjct: 315 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIKKAKLMLGW 374
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 375 EPVVPLEEGLNKAIHYFRKELE 396
>UNIPROTKB|E1BV28 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370
Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 CTD:80146 KO:K08678 GO:GO:0048040
OMA:LGHENFE EMBL:AADN02017868 IPI:IPI00574801 RefSeq:XP_416926.1
ProteinModelPortal:E1BV28 Ensembl:ENSGALT00000027123 GeneID:418728
KEGG:gga:418728 NextBio:20821874 Uniprot:E1BV28
Length = 421
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 85/322 (26%), Positives = 152/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 88 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 147
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 148 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 202
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 203 TSEVYGD-----PEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 257
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 258 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGPGTQTRAFQYVSDLVNGLVALMN 315
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ I + + + R D K LGW
Sbjct: 316 SNVSSPVNLGNPEEHTILEFAQLIKKLVGSGSEIQFLSEAQDDPQKRKPDIRKAKLLLGW 375
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 376 EPVVPLEEGLNKAIHYFRKELE 397
>TIGR_CMR|BA_0507 [details] [associations]
symbol:BA_0507 "NAD-dependent epimerase/dehydratase family
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000168004 HSSP:P32054 RefSeq:NP_843043.1
RefSeq:YP_017126.1 RefSeq:YP_026759.1 ProteinModelPortal:Q81YX3
DNASU:1087740 EnsemblBacteria:EBBACT00000010883
EnsemblBacteria:EBBACT00000018378 EnsemblBacteria:EBBACT00000021242
GeneID:1087740 GeneID:2816749 GeneID:2850006 KEGG:ban:BA_0507
KEGG:bar:GBAA_0507 KEGG:bat:BAS0479 OMA:IRWSYAV
ProtClustDB:CLSK915839 BioCyc:BANT260799:GJAJ-522-MONOMER
BioCyc:BANT261594:GJ7F-544-MONOMER Uniprot:Q81YX3
Length = 321
Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
Identities = 91/320 (28%), Positives = 158/320 (49%)
Query: 31 VTGAGGFIASHIARRLKSEGHYI-IASDWKKNEHMTEDMFCHEFHLVDLRVMD-NCL-KV 87
+TG GFI SH+A L G+ + I ++ K ++ D E ++ + V+D N + ++
Sbjct: 7 ITGGAGFIGSHLAEELVGRGYNVTIVDNFYKGKNKYHDELMKEIRVIPISVLDKNSIYEL 66
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
D VF+LAA +G ++ + +I N N+L+A+ + G K+ +AS++ +Y
Sbjct: 67 VNQHDVVFHLAAILGVKTTMEKSIELIETNFDGTR-NILQAA-LKGKKKVVFASTSEVYG 124
Query: 148 EFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF- 206
+ K + + A ++ + +Y + K E LC Y + G+ + R+ NIYGP
Sbjct: 125 KAKPPFSEEGDRLYGA-TSKIRWSYAICKTLEETLCLGYALE-GLPVTIVRYFNIYGPRA 182
Query: 207 --GTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR-EP 263
G + G+ P F AL D ++GDG QTR FT++ + VE +R E
Sbjct: 183 KDGPYAGV--IPR-FISAALQGEDIL-VYGDGEQTRCFTYVSDAVEATIRAMDEKVNGEI 238
Query: 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-------GPEGVRGRNSDNTLIKEKLGW 316
+NIGS+ S+ E+AE++ D I +P G E + R D T +K+ + +
Sbjct: 239 INIGSENEKSIKEVAEVIKKLTDSSSKIVQVPFEEVYPHGFEEIPNRRPDVTKLKDLVQF 298
Query: 317 APSMKLKDGLRITYFWIKEQ 336
+ +DGL+ T W +E+
Sbjct: 299 QAKVTWEDGLKETIKWFREE 318
>TAIR|locus:2081675 [details] [associations]
symbol:AUD1 "AT3G62830" species:3702 "Arabidopsis
thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS] [GO:0016020
"membrane" evidence=TAS] [GO:0042732 "D-xylose metabolic process"
evidence=IDA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IDA] [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005886 EMBL:CP002686 GO:GO:0000139
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005768
EMBL:AL162651 GO:GO:0005802 GO:GO:0042732 GO:GO:0008460
GO:GO:0019305 GO:GO:0048040 OMA:FSEALIM UniGene:At.23561
UniGene:At.27002 UniGene:At.63633 EMBL:AY143897 IPI:IPI00539694
PIR:T48072 RefSeq:NP_001118893.1 RefSeq:NP_191842.1
ProteinModelPortal:Q9LZI2 SMR:Q9LZI2 PRIDE:Q9LZI2
EnsemblPlants:AT3G62830.1 EnsemblPlants:AT3G62830.2 GeneID:825458
KEGG:ath:AT3G62830 TAIR:At3g62830 InParanoid:Q9LZI2
PhylomeDB:Q9LZI2 ProtClustDB:PLN02206 Genevestigator:Q9LZI2
Uniprot:Q9LZI2
Length = 445
Score = 291 (107.5 bits), Expect = 1.6e-25, P = 1.6e-25
Identities = 88/322 (27%), Positives = 149/322 (46%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHLVDLRVMDN 83
LR+ VTG GF+ SH+ RL + G +I D + E++ F ++ V++
Sbjct: 119 LRVVVTGGAGFVGSHLVDRLMARGDTVIVVDNFFTGRKENVMHHFSNPNFEMIRHDVVEP 178
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143
L VD +++LA + + + N + N + + NML ++ G RF S++
Sbjct: 179 ILLE---VDQIYHLACPASPVHY-KFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTS 233
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+Y + Q V + P + Y K +E L Y + +E R+ R N Y
Sbjct: 234 EVYGDPLQ-HPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTY 292
Query: 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREP 263
GP + + F +AL + ++GDG QTRSF F+ + VEG++RL + + P
Sbjct: 293 GPRMCIDD-GRVVSNFVAQALRK-EPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGEHVGP 350
Query: 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKL 322
N+G+ +M E+A++V D I P E R D T KE LGW P + L
Sbjct: 351 FNLGNPGEFTMLELAKVVQETIDPNANIEFRPNTEDDPHKRKPDITKAKELLGWEPKVSL 410
Query: 323 KDGLRITYFWIKEQIEKEKTQG 344
+ GL + ++++ ++ +G
Sbjct: 411 RQGLPLMVKDFRQRVFGDQKEG 432
>UNIPROTKB|F1PU61 [details] [associations]
symbol:UXS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001509 InterPro:IPR021761
Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040 GO:GO:0005739
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0048040 OMA:LGHENFE
EMBL:AAEX03007410 Ensembl:ENSCAFT00000003315 Uniprot:F1PU61
Length = 414
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 84/322 (26%), Positives = 152/322 (47%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 81 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 140
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 141 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 195
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
++ +Y + V + D W P P+ Y K +E +C Y K G+E RV
Sbjct: 196 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVA 250
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N +GP + + F +AL + ++G G QTR+F ++ + V G++ L
Sbjct: 251 RIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQYVSDLVNGLVALMN 308
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
S+ PVN+G+ E ++ E A+++ + I + + + R D K L W
Sbjct: 309 SNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQKRKPDIRKAKMMLAW 368
Query: 317 APSMKLKDGLRITYFWIKEQIE 338
P + L++GL + ++++E
Sbjct: 369 EPVVPLEEGLNKAIHYFRKELE 390
>TIGR_CMR|GSU_0627 [details] [associations]
symbol:GSU_0627 "GDP-fucose synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 OMA:IHCAGRV RefSeq:NP_951685.1 ProteinModelPortal:Q74FI1
SMR:Q74FI1 GeneID:2685221 KEGG:gsu:GSU0627 PATRIC:22024005
ProtClustDB:CLSK827960 BioCyc:GSUL243231:GH27-626-MONOMER
Uniprot:Q74FI1
Length = 314
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 91/320 (28%), Positives = 146/320 (45%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
RI V G G + S I R+L +EG+ + T E L D +
Sbjct: 6 RIYVAGHRGLVGSAIVRKLTAEGYGNLLL-------RTSG----ELDLRDQAAVA-AFFA 53
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
+ D+VF AA +GG+ + + +Y+N MI N++ +S +GV + + S CIYP
Sbjct: 54 AEQPDYVFLAAAKVGGIVANNTYPAEFIYDNLMIEANVIHSSYRTGVSKLLFLGSTCIYP 113
Query: 148 EFKQLETNVSLKESDAWPAEP-QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206
K + + P EP +AY + K+A LC+ Y + +G N+YGP
Sbjct: 114 --KMASQPIREEYLLTGPLEPTNEAYAIAKIAGISLCRSYNRQYGTRFIAAMPTNLYGPN 171
Query: 207 GTWKGMEKA---PAA---FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKS-D 259
+ +EK+ PA F + +WG G R F +D+ + L L + +
Sbjct: 172 DNFD-LEKSHVLPALIRKFHEAKIAGAPTVTVWGTGAPLREFIHVDDVADAALYLMRHHE 230
Query: 260 FREPVNIGSDEMVSMNEMA---EIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGW 316
+ VNIGS E +S+ ++A +IV+ FE + + P+G + SD + + LGW
Sbjct: 231 GNDIVNIGSGEEISIRDLALLVKIVVGFEGEL--VFDASKPDGTPRKLSDVSRL-HSLGW 287
Query: 317 APSMKLKDGLRITYFWIKEQ 336
+ L+DG+R TY W Q
Sbjct: 288 RHRIGLEDGVRETYEWFVGQ 307
>TAIR|locus:2053275 [details] [associations]
symbol:UXS6 "UDP-XYL synthase 6" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005886 GO:GO:0003824 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC005727 HSSP:P27830 HOGENOM:HOG000168004 OMA:LGHENFE
ProtClustDB:CLSN2683686 EMBL:AY099703 EMBL:AY128899 IPI:IPI00536112
PIR:F84688 RefSeq:NP_001077972.1 RefSeq:NP_180443.1
RefSeq:NP_973555.1 UniGene:At.38572 ProteinModelPortal:Q9ZV36
SMR:Q9ZV36 STRING:Q9ZV36 PRIDE:Q9ZV36 EnsemblPlants:AT2G28760.1
EnsemblPlants:AT2G28760.2 EnsemblPlants:AT2G28760.3 GeneID:817426
KEGG:ath:AT2G28760 TAIR:At2g28760 InParanoid:Q9ZV36
PhylomeDB:Q9ZV36 ArrayExpress:Q9ZV36 Genevestigator:Q9ZV36
Uniprot:Q9ZV36
Length = 343
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 91/317 (28%), Positives = 149/317 (47%)
Query: 16 LEREPYWPSEKLRISVTGAGGFIASHIARRL-KSEGHYIIASD--WKKNEHMTEDMFCH- 71
L ++ S +RI VTG GFI SH+ +L ++E + +I +D + ++ + H
Sbjct: 21 LRNSKFFQSN-MRILVTGGAGFIGSHLVDKLMQNEKNEVIVADNYFTGSKDNLKKWIGHP 79
Query: 72 EFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI 131
F L+ V + L V VD +++LA + F + N + N + + NML ++
Sbjct: 80 RFELIRHDVTEP-LFVE--VDQIYHLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKR 135
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG 191
G R S++ +Y + + + P + Y K +E L Y + G
Sbjct: 136 VGA-RILLTSTSEVYGD-PLVHPQTESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHG 193
Query: 192 IECRVGRFHNIYGP-FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250
IE R+ R N YGP G + + F +AL + + G QTRSF ++ + VE
Sbjct: 194 IEIRIARIFNTYGPRMNIDDG--RVVSNFIAQALRG-EALTVQKPGTQTRSFCYVSDMVE 250
Query: 251 GVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTL 309
G++RL + D P+NIG+ +M E+AE V + I + P+ R R D +
Sbjct: 251 GLMRLMEGDQTGPINIGNPGEFTMVELAETVKELIKPDVEIKMVENTPDDPRQRKPDISK 310
Query: 310 IKEKLGWAPSMKLKDGL 326
KE LGW P +KL++GL
Sbjct: 311 AKEVLGWEPKVKLREGL 327
>TAIR|locus:2078206 [details] [associations]
symbol:UXS5 "UDP-XYL synthase 5" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;TAS] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009749 "response to glucose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0005829
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
EMBL:AL133298 HSSP:P27830 HOGENOM:HOG000168004 EMBL:AY072098
EMBL:AY096586 EMBL:AY087118 EMBL:AK228600 EMBL:AK317497
IPI:IPI00534151 PIR:T45701 RefSeq:NP_001030820.1 RefSeq:NP_190228.1
UniGene:At.43598 ProteinModelPortal:Q9SN95 SMR:Q9SN95 STRING:Q9SN95
PRIDE:Q9SN95 EnsemblPlants:AT3G46440.1 EnsemblPlants:AT3G46440.2
GeneID:823794 KEGG:ath:AT3G46440 TAIR:At3g46440 InParanoid:Q9SN95
OMA:QISTQNR PhylomeDB:Q9SN95 ProtClustDB:CLSN2683686
ArrayExpress:Q9SN95 Genevestigator:Q9SN95 Uniprot:Q9SN95
Length = 341
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 86/306 (28%), Positives = 145/306 (47%)
Query: 27 LRISVTGAGGFIASHIARRL-KSEGHYIIASD--WKKNEHMTEDMFCH-EFHLVDLRVMD 82
+RI ++G GFI SH+ +L ++E + +I +D + ++ + H F L+ V +
Sbjct: 29 MRILISGGAGFIGSHLVDKLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTE 88
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
L VD +++LA + F + N + N + + NML ++ G R S+
Sbjct: 89 PLLIE---VDQIYHLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 143
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
+ +Y + + + P + Y K +E L Y + GIE R+ R N
Sbjct: 144 SEVYGD-PLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 202
Query: 203 YGP-FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 261
YGP G + + F +AL + + G QTRSF ++ + V+G++RL + D
Sbjct: 203 YGPRMNIDDG--RVVSNFIAQALRG-EALTVQKPGTQTRSFCYVSDMVDGLMRLMEGDDT 259
Query: 262 EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPSM 320
P+NIG+ +M E+AE V + + I + P+ R R D T KE LGW P +
Sbjct: 260 GPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDITKAKEVLGWEPKV 319
Query: 321 KLKDGL 326
KL++GL
Sbjct: 320 KLREGL 325
>TIGR_CMR|CJE_1513 [details] [associations]
symbol:CJE_1513 "NAD-dependent epimerase/dehydratase
family protein" species:195099 "Campylobacter jejuni RM1221"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
RefSeq:YP_179498.1 ProteinModelPortal:Q5HT87 STRING:Q5HT87
GeneID:3232144 KEGG:cjr:CJE1513 PATRIC:20044818 OMA:EVFRLCC
ProtClustDB:CLSK864552 BioCyc:CJEJ195099:GJC0-1541-MONOMER
Uniprot:Q5HT87
Length = 323
Score = 270 (100.1 bits), Expect = 1.8e-23, P = 1.8e-23
Identities = 87/329 (26%), Positives = 150/329 (45%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIA-SDWKKNE---HMTEDMFCHEFHLV--DLRVMD 82
I VTGA GFI SH+ L +G + A S + H+ + F + +V DLR
Sbjct: 4 ILVTGADGFIGSHLCESLVKKGFKVRALSQYNSFNFWGHLEKSPFLKDMEVVSGDLRDSF 63
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
C K+TK +D +F+L A + + + + + N + NMLEA++ + + F + S+
Sbjct: 64 FCEKITKNIDAIFHLGA-LIAIPYSYTAPQSYVDTNVNGTLNMLEAAKKNEISHFIHTST 122
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
+ +Y T + + P +PQ Y K+A++ + Y F + + R N
Sbjct: 123 SEVYG------TAFYVPIDEKHPLQPQSPYSASKIAADMMALSYYNSFNLNVNIARPFNT 176
Query: 203 YGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK-SDFR 261
YGP + + + P + L+ + ++ GD R F+ + EG + L F
Sbjct: 177 YGPRQSARAI--IPTIITQ-ILSGAKEIKL-GDLSPKRDLNFVLDTCEGFISLLNLKHFG 232
Query: 262 EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS-------DNTLIKEKL 314
E NIGS SM E+ ++ D K+ I I + +R +NS D +K+
Sbjct: 233 EVYNIGSGVEYSMQEVLNLIQKILDSKVKI--IQDEQRLRPKNSEVFRLCCDANKLKKAT 290
Query: 315 GWAPSMKLKDGLRITYFWIKEQIEKEKTQ 343
W + L++GLR + + KE +E K++
Sbjct: 291 NWQSKISLEEGLRQSIEYFKENLENYKSE 319
>TAIR|locus:2168539 [details] [associations]
symbol:UXS3 "UDP-glucuronic acid decarboxylase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0042732 "D-xylose metabolic process"
evidence=RCA;IDA] [GO:0048040 "UDP-glucuronate decarboxylase
activity" evidence=IDA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002688 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0042732
GO:GO:0048040 IPI:IPI00846930 RefSeq:NP_001078768.1
UniGene:At.24136 ProteinModelPortal:F4KHU8 SMR:F4KHU8 PRIDE:F4KHU8
EnsemblPlants:AT5G59290.2 GeneID:836047 KEGG:ath:AT5G59290
OMA:EINMVEN ArrayExpress:F4KHU8 Uniprot:F4KHU8
Length = 357
Score = 262 (97.3 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 83/306 (27%), Positives = 145/306 (47%)
Query: 27 LRISVTGAGGFIASHIARRL-KSEGHYIIASD--WKKNEHMTEDMFCH-EFHLVDLRVMD 82
+RI ++G GFI SH+ +L ++E + ++ +D + ++ + H F L+ V +
Sbjct: 45 MRILISGGAGFIGSHLVDKLMENEKNEVVVADNYFTGSKENLKKWIGHPRFELIRHDVTE 104
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
L VD +++LA + F + N + N + + NML ++ G R S+
Sbjct: 105 PLLIE---VDRIYHLACPASPI-FYKYNPVKTIKTNVIGTLNMLGLAKRVGA-RILLTST 159
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
+ +Y + + + P + Y K +E L Y + GIE R+ R N
Sbjct: 160 SEVYGD-PLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNT 218
Query: 203 YGP-FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFR 261
YGP G + + F +AL + + G QTRSF ++ + V+G++RL + +
Sbjct: 219 YGPRMNIDDG--RVVSNFIAQALRG-EALTVQKPGTQTRSFCYVSDMVDGLIRLMEGNDT 275
Query: 262 EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDNTLIKEKLGWAPSM 320
P+NIG+ +M E+AE V + + I + P+ R R D + KE LGW P +
Sbjct: 276 GPINIGNPGEFTMVELAETVKELINPSIEIKMVENTPDDPRQRKPDISKAKEVLGWEPKV 335
Query: 321 KLKDGL 326
KL++GL
Sbjct: 336 KLREGL 341
>FB|FBgn0035848 [details] [associations]
symbol:CG7979 species:7227 "Drosophila melanogaster"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 EMBL:AE014296 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K08678 OMA:LGHENFE
EMBL:AY051913 RefSeq:NP_648182.1 UniGene:Dm.20044 HSSP:P93031
SMR:Q9VSE8 STRING:Q9VSE8 EnsemblMetazoa:FBtr0076690 GeneID:38911
KEGG:dme:Dmel_CG7979 UCSC:CG7979-RA FlyBase:FBgn0035848
InParanoid:Q9VSE8 OrthoDB:EOG45HQCS GenomeRNAi:38911 NextBio:810971
Uniprot:Q9VSE8
Length = 441
Score = 270 (100.1 bits), Expect = 3.2e-22, P = 3.2e-22
Identities = 84/317 (26%), Positives = 149/317 (47%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVMDNC 84
RI +TG GF+ SH+ L +GH +I D + + E HE F L+ ++ N
Sbjct: 117 RILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGHENFELIHHDIV-NP 175
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLE-ASRISGVKRFFYASSA 143
L + +D +++LA+ ++ + I NTM + N+L A R+ + + AS++
Sbjct: 176 LFIE--IDEIYHLASPASPPHYMYNPVKTIK-TNTMGTINVLGLAKRV--MAKVLIASTS 230
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+Y + + P P+ Y K SE L Y K ++ RV R N Y
Sbjct: 231 EVYGD-PTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTY 289
Query: 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREP 263
GP + + F +AL + + ++G+G QTRSF ++ + V+G++ L S++ +P
Sbjct: 290 GP-RMHMNDGRVVSNFILQALRN-ETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQP 347
Query: 264 VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKL 322
VN+G+ ++ E AEI+ I E + R D T ++ L W P + L
Sbjct: 348 VNLGNPVEQTIGEFAEIIKKLVGGPSVIKQSKAMEDDPQRRKPDITRARQLLHWEPKVPL 407
Query: 323 KDGLRITYFWIKEQIEK 339
+ GL+ T + + ++ +
Sbjct: 408 ETGLQRTISYFRNELAR 424
>WB|WBGene00005019 [details] [associations]
symbol:sqv-1 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040025 "vulval development"
evidence=IMP] [GO:0018991 "oviposition" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0060465 "pharynx development" evidence=IMP]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0009792
GO:GO:0002009 GO:GO:0005737 GO:GO:0018991 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 GO:GO:0040025
GeneTree:ENSGT00530000063128 KO:K08678 GO:GO:0048040 EMBL:FO081016
EMBL:AY147933 PIR:T15892 RefSeq:NP_501418.1 UniGene:Cel.19768
ProteinModelPortal:G5EF65 SMR:G5EF65 EnsemblMetazoa:D2096.4.1
EnsemblMetazoa:D2096.4.2 GeneID:177631 KEGG:cel:CELE_D2096.4
CTD:177631 WormBase:D2096.4 OMA:FSEALIM NextBio:897688
Uniprot:G5EF65
Length = 467
Score = 268 (99.4 bits), Expect = 9.1e-22, P = 9.1e-22
Identities = 88/324 (27%), Positives = 152/324 (46%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCH-EFHLVDLRVMDNC 84
RI +TG GF+ SH+ +L +GH +IA D + + E H F +V V+ N
Sbjct: 138 RILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGRKKNVEHWIGHPNFEMVHHDVV-NP 196
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLE-ASRISGVKRFFYASSA 143
V VD +++LA+ ++ + I NT+ + NML A R+ AS++
Sbjct: 197 YFVE--VDQIYHLASPASPPHYMYNPVKTIK-TNTLGTINMLGLAKRVKAT--VLLASTS 251
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+Y + ++ P+ Y K +E L Y K I+ R+ R N +
Sbjct: 252 EVYGD-PEVHPQPETYWGHVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIFNTF 310
Query: 204 GPFGTWKGMEKAPAAFCRKALTSTDK-FEMWGDGLQTRSFTFIDECVEGVLRLTKSDFRE 262
GP + + F +AL DK ++G+G QTRSF ++ + V+G+++L S++
Sbjct: 311 GP-RMHMNDGRVVSNFIIQALQ--DKPITIYGNGTQTRSFQYVTDLVDGLIKLMNSNYSL 367
Query: 263 PVNIGSDEMVSMNEMAEIVLSF-EDKKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSM 320
PVNIG+ E ++ + A I+ I ++ + + R D E++ WAP +
Sbjct: 368 PVNIGNPEEHTIGQFATIIRDLVPGSTSEIVNLESQQDDPQQRRPDIRRAAEQISWAPQV 427
Query: 321 KLKDGLRITYFWIKEQIEKEKTQG 344
+KDGL T + + +I++ K G
Sbjct: 428 HMKDGLLKTVDYFRAEIDRNKRGG 451
>TAIR|locus:2030973 [details] [associations]
symbol:GER2 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0042350 "GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0006857 "oligopeptide transport" evidence=RCA]
InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AC034106 GO:GO:0016853 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:PLN02725 GO:GO:0050577 GO:GO:0042351 EMBL:AY063880
EMBL:AY096364 IPI:IPI00526329 PIR:B86314 RefSeq:NP_564040.1
UniGene:At.15825 ProteinModelPortal:Q9LMU0 SMR:Q9LMU0 STRING:Q9LMU0
PaxDb:Q9LMU0 PRIDE:Q9LMU0 EnsemblPlants:AT1G17890.1 GeneID:838368
KEGG:ath:AT1G17890 GeneFarm:5163 TAIR:At1g17890 InParanoid:Q9LMU0
OMA:IHCAGRV PhylomeDB:Q9LMU0 Genevestigator:Q9LMU0
GermOnline:AT1G17890 Uniprot:Q9LMU0
Length = 328
Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 90/342 (26%), Positives = 153/342 (44%)
Query: 12 TYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH 71
T E++ + + +I V G G + S I R+L+ +G ++ H
Sbjct: 5 TGSEMKSGSFMLEKSAKIFVAGHRGLVGSAIVRKLQDQGF----TNLVLRTHS------- 53
Query: 72 EFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI 131
E L +++ K V +V AA +GG+ + + + N I N++ ++
Sbjct: 54 ELDLTSQSDVESFFATEKPV-YVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYT 112
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA-YGLEKLASEELCKHYTKDF 190
GVK+ + S+CIYP+F S + P EP + Y + K+A ++C+ Y
Sbjct: 113 HGVKKLLFLGSSCIYPKFAPQPIPESALLTG--PLEPTNEWYAIAKIAGIKMCQAYRLQH 170
Query: 191 GIECRVGRFHNIYGPFGTW--KGMEKAPAAFCR----KALTSTDKFEMWGDGLQTRSFTF 244
+ G N+YG + + PA R KA + D+ +WG G R F
Sbjct: 171 QWDAISGMPTNLYGQNDNFHPENSHVLPALMRRFHEAKA-NNADEVVVWGSGSPLREFLH 229
Query: 245 IDECVEGVLRLTK--SDFREPVNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEG 299
+D+ + + L S F E VN+GS V++ E+AE+V + F+ K + P+G
Sbjct: 230 VDDLADACVFLMDQYSGF-EHVNVGSGVEVTIKELAELVKEVVGFKGKL--VWDTTKPDG 286
Query: 300 VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
+ D++ + LGW P + LKDGL TY W E + ++K
Sbjct: 287 TPRKLMDSSKLAS-LGWTPKISLKDGLSQTYEWYLENVVQKK 327
>TIGR_CMR|CHY_0979 [details] [associations]
symbol:CHY_0979 "dTDP-glucose 4,6-dehydratase"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0019305 "dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0009225 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:YP_359826.1 ProteinModelPortal:Q3ADF8
SMR:Q3ADF8 STRING:Q3ADF8 GeneID:3726804 KEGG:chy:CHY_0979
PATRIC:21275091 OMA:AEFRPEA ProtClustDB:CLSK2310403
BioCyc:CHYD246194:GJCN-978-MONOMER Uniprot:Q3ADF8
Length = 309
Score = 241 (89.9 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 89/320 (27%), Positives = 145/320 (45%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYII------ASDWKKNEHMTEDMFCHEFHLVDLRV 80
++I VTG GFI S R+ + II A D ++ E + + + ++ + D
Sbjct: 1 MKILVTGGAGFIGSAFVRKYAYDHELIIVDKLTYAGDLRRIEEVRDRIKFYKADVADKTA 60
Query: 81 MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN--NTMISFNMLEASRISGVKRFF 138
++ K + V + AA+ IQ I N T + ML+ASR G+++F
Sbjct: 61 IEEIFDKEKP-EAVVHFAAESHVDRSIQDPTPFIETNVKGTQV---MLDASRKYGIEKFV 116
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGR 198
+ S+ +Y E + E + +ES P P Y + K A++ L + Y + +G+ V R
Sbjct: 117 HISTDEVYGELGK-EGQFT-EES---PLRPNSPYSVSKAAADMLARAYHRTYGLPVIVAR 171
Query: 199 FHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRLTK 257
N YGP W+ EK +KAL + + ++G GL R + ++D+C+E V L L K
Sbjct: 172 PCNNYGP---WQYPEKLIPVVIKKALNN-EPIPVYGQGLNVREWLYVDDCIEAVYLLLQK 227
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHHIPGPEGVRGRNSDNTL-IKEKLG 315
E NIGS E E+ + +L K + I + G R S N+ IK
Sbjct: 228 GKPGEAYNIGSGEEKGNIEVVKEILRILGKPESLITFVEDRPGHDFRYSLNSKKIKMNYA 287
Query: 316 WAPSMKLKDGLRITYFWIKE 335
W + +G+R W K+
Sbjct: 288 WKHKVNFNEGIRFVIDWYKK 307
>TIGR_CMR|DET_0204 [details] [associations]
symbol:DET_0204 "NAD-dependent epimerase/dehydratase
family protein" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016491 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0044237
GO:GO:0055114 KO:K01784 HOGENOM:HOG000167994 RefSeq:YP_180952.1
ProteinModelPortal:Q3Z9Z7 STRING:Q3Z9Z7 GeneID:3230493
KEGG:det:DET0204 PATRIC:21607483 OMA:NTLATHN ProtClustDB:CLSK837597
BioCyc:DETH243164:GJNF-204-MONOMER Uniprot:Q3Z9Z7
Length = 312
Score = 241 (89.9 bits), Expect = 3.0e-20, P = 3.0e-20
Identities = 86/324 (26%), Positives = 148/324 (45%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHE---FHLVDLRVMDNCL 85
+ VTG GFI SH+ L S+G + D N + E++ C + +++ + D L
Sbjct: 4 VLVTGGCGFIGSHLVDALLSQGFKVRVMDNLSNGSL-ENLKCGQRDKLEIINGNLTDKFL 62
Query: 86 --KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA 143
KG + VF+LAA + + + NNT+ + N+LEA R + V R +ASSA
Sbjct: 63 LDSAVKGCETVFHLAAHANVQNSAKDT-GIDLENNTLATHNLLEAMRRNRVDRLVFASSA 121
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+Y E + +++ + D P P YG KLA E L Y+ +G++ + RF NI
Sbjct: 122 AVYGE-----SGLTVLDEDYGPLLPISLYGASKLAGEGLISAYSHLYGLKATMFRFANIV 176
Query: 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-LTKSDFRE 262
G + F + + + GDG Q++ + + +CV G+L KS
Sbjct: 177 GS----RRHSGVIYDFVSRLRQNPSSLLVLGDGSQSKPYLHVSDCVAGMLLGFEKSTKNL 232
Query: 263 PV-NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIK------EKLG 315
+ N+G+ + V++ ++A +V S K + G G RG D ++ LG
Sbjct: 233 GLYNLGTPDSVAVRDIACLVASEMGLKNVCYSYSG--GERGWQGDAPQVRFDISRIRTLG 290
Query: 316 WAPSMKLKDGLRITYFWIKEQIEK 339
+ P +++ IKE +++
Sbjct: 291 FKPKFTSLQAVKLA---IKETLKE 311
>TAIR|locus:2197264 [details] [associations]
symbol:GER1
""GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase 1""
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0006005 "L-fucose biosynthetic process"
evidence=IDA] [GO:0019853 "L-ascorbic acid biosynthetic process"
evidence=IMP] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 UniPathway:UPA00128
InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0016853 EMBL:AC010556 EMBL:AK228837 EMBL:BT029480
EMBL:AF045286 EMBL:AB034806 IPI:IPI00540212 PIR:F96758
RefSeq:NP_177468.2 UniGene:At.1531 ProteinModelPortal:O49213
SMR:O49213 STRING:O49213 PaxDb:O49213 PRIDE:O49213
EnsemblPlants:AT1G73250.1 GeneID:843659 KEGG:ath:AT1G73250
GeneFarm:5162 TAIR:At1g73250 HOGENOM:HOG000168011 InParanoid:O49213
KO:K02377 OMA:DFISAMP ProtClustDB:PLN02725
BioCyc:ARA:AT1G73250-MONOMER BioCyc:MetaCyc:AT1G73250-MONOMER
Genevestigator:O49213 GermOnline:AT1G73250 GO:GO:0050577
GO:GO:0042351 GO:GO:0006005 Uniprot:O49213
Length = 323
Score = 239 (89.2 bits), Expect = 5.2e-20, P = 5.2e-20
Identities = 87/325 (26%), Positives = 146/325 (44%)
Query: 24 SEK-LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
S+K +I V G G + S I R+L+ +G ++ H E L ++
Sbjct: 13 SDKSAKIFVAGHRGLVGSAIVRKLQEQGF----TNLVLKTHA-------ELDLTRQADVE 61
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
+ K V +V AA +GG+ + + + N I N++ ++ GVK+ + S
Sbjct: 62 SFFSQEKPV-YVILAAAKVGGIHANNTYPADFIGVNLQIQTNVIHSAYEHGVKKLLFLGS 120
Query: 143 ACIYPEFK-QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
+CIYP+F Q +L + P + Y + K+A + C+ Y G + G N
Sbjct: 121 SCIYPKFAPQPIPESALLTASLEPTN--EWYAIAKIAGIKTCQAYRIQHGWDAISGMPTN 178
Query: 202 IYGPFGTW--KGMEKAPAA---FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-VLRL 255
+YGP + + PA F + ++ +WG G R F +D+ + V L
Sbjct: 179 LYGPNDNFHPENSHVLPALMRRFHEAKVNGAEEVVVWGTGSPLREFLHVDDLADACVFLL 238
Query: 256 TKSDFREPVNIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKE 312
+ E VNIGS + V++ E+AE+V + FE K L P+G + D++ +
Sbjct: 239 DRYSGLEHVNIGSGQEVTIRELAELVKEVVGFEGK-LG-WDCTKPDGTPRKLMDSSKLAS 296
Query: 313 KLGWAPSMKLKDGLRITYFWIKEQI 337
LGW P + L+DGL TY W + +
Sbjct: 297 -LGWTPKVSLRDGLSQTYDWYLKNV 320
>UNIPROTKB|Q6MWV3 [details] [associations]
symbol:galE1 "UDP-glucose 4-epimerase" species:1773
"Mycobacterium tuberculosis" [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0040007 "growth" evidence=IMP] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00214 InterPro:IPR016040 GO:GO:0005886
GO:GO:0040007 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:BX842583 GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 KO:K01784 PIR:C70562 RefSeq:NP_215015.2
RefSeq:NP_338283.1 RefSeq:YP_006517123.1 HSSP:P09147
ProteinModelPortal:Q6MWV3 SMR:Q6MWV3 PRIDE:Q6MWV3
EnsemblBacteria:EBMYCT00000000637 EnsemblBacteria:EBMYCT00000072644
GeneID:13317242 GeneID:885765 GeneID:926502 KEGG:mtu:Rv3634c
KEGG:mtv:RVBD_3634c PATRIC:18129967 PATRIC:18156681
TubercuList:Rv3634c HOGENOM:HOG000167994 OMA:HSVADPQ
ProtClustDB:CLSK881159 BioCyc:MetaCyc:MONOMER-15254 Uniprot:Q6MWV3
Length = 314
Score = 234 (87.4 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 88/321 (27%), Positives = 147/321 (45%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKN-EHMTEDMFCHEFHLVDLRV 80
+R VTGA GFI S + RL ++GH ++ D N EH+ ++ H F D+
Sbjct: 1 MRALVTGAAGFIGSTLVDRLLADGHSVVGLDNFATGRATNLEHLADNS-AHVFVEADIVT 59
Query: 81 MD-NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
D + + + VF+LAA + + ++ N + + + EA+R +GV++ +
Sbjct: 60 ADLHAILEQHRPEVVFHLAAQIDVRRSV-ADPQFDAAVNVIGTVRLAEAARQTGVRKIVH 118
Query: 140 ASSA-CIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
SS IY PE+ ET P +P Y K+A E + +G++C
Sbjct: 119 TSSGGSIYGTPPEYPTPETA---------PTDPASPYAAGKVAGEIYLNTFRHLYGLDCS 169
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
N+YGP G E A +AL S ++GDG TR + F+D+ V+ +R+
Sbjct: 170 HIAPANVYGPRQDPHG-EAGVVAIFAQALLSGKPTRVFGDGTNTRDYVFVDDVVDAFVRV 228
Query: 256 TKSDFREPV--NIGSDEMVSMNEM-AEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKE 312
+ +D + NIG+ + S ++ + + + P H P ++ D L +
Sbjct: 229 S-ADVGGGLRFNIGTGKETSDRQLHSAVAAAVGGPDDPEFHPPRLGDLKRSCLDIGLAER 287
Query: 313 KLGWAPSMKLKDGLRIT--YF 331
LGW P ++L DG+R T YF
Sbjct: 288 VLGWRPQIELADGVRRTVEYF 308
>UNIPROTKB|P32055 [details] [associations]
symbol:fcl "Fcl" species:83333 "Escherichia coli K-12"
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0042351 "'de novo' GDP-L-fucose biosynthetic
process" evidence=IEA] [GO:0009242 "colanic acid biosynthetic
process" evidence=IEA] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016853 "isomerase activity" evidence=IEA]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=IEA]
[GO:0050577 "GDP-L-fucose synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 UniPathway:UPA00980
InterPro:IPR016040 GO:GO:0005737 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0016853
GO:GO:0009103 HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577
GO:GO:0042351 EMBL:U38473 PIR:C64971 RefSeq:NP_416556.1
RefSeq:YP_490294.1 PDB:1BSV PDB:1BWS PDB:1E6U PDB:1E7Q PDB:1E7R
PDB:1E7S PDB:1FXS PDB:1GFS PDBsum:1BSV PDBsum:1BWS PDBsum:1E6U
PDBsum:1E7Q PDBsum:1E7R PDBsum:1E7S PDBsum:1FXS PDBsum:1GFS
ProteinModelPortal:P32055 SMR:P32055 IntAct:P32055
EnsemblBacteria:EBESCT00000000077 EnsemblBacteria:EBESCT00000014550
GeneID:12930697 GeneID:946563 KEGG:ecj:Y75_p2015 KEGG:eco:b2052
PATRIC:32119437 EchoBASE:EB1736 EcoGene:EG11788 OMA:ASVHVMN
ProtClustDB:CLSK880275 BioCyc:EcoCyc:FCL-MONOMER
BioCyc:ECOL316407:JW2037-MONOMER BioCyc:MetaCyc:FCL-MONOMER
EvolutionaryTrace:P32055 Genevestigator:P32055 GO:GO:0009242
Uniprot:P32055
Length = 321
Score = 235 (87.8 bits), Expect = 3.0e-19, P = 3.0e-19
Identities = 81/331 (24%), Positives = 142/331 (42%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL 85
K R+ + G G + S I R+L+ G + T D E +L+D R + +
Sbjct: 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVL-------RTRD----ELNLLDSRAVHDFF 51
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
++ +D V+ AA +GG+ + + +Y N MI N++ A+ + V + + S+CI
Sbjct: 52 -ASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI 110
Query: 146 YPEF-KQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
YP+ KQ L + P + Y + K+A +LC+ Y + +G + R N+YG
Sbjct: 111 YPKLAKQPMAESELLQGTLEPTN--EPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYG 168
Query: 205 PFGTW--KGMEKAPAA---FCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG---VLRLT 256
P + PA F + +WG G R F +D+ V+ L
Sbjct: 169 PHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMAAASIHVMELA 228
Query: 257 KSDFRE---P----VNIGSDEMVSMNEMAEIVLSFEDKK-LPIHHIPGPEGVRGRNSDNT 308
+ E P +N+G+ ++ E+A+ + K + P+G + D T
Sbjct: 229 HEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVT 288
Query: 309 LIKEKLGWAPSMKLKDGLRITYFWIKEQIEK 339
+ + LGW + L+ GL TY W E ++
Sbjct: 289 RLHQ-LGWYHEISLEAGLASTYQWFLENQDR 318
>TIGR_CMR|CBU_0829 [details] [associations]
symbol:CBU_0829 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 KO:K01784
HOGENOM:HOG000167994 RefSeq:NP_819849.2 ProteinModelPortal:Q83DA9
PRIDE:Q83DA9 GeneID:1208722 KEGG:cbu:CBU_0829 PATRIC:17930355
OMA:ANICAMK ProtClustDB:CLSK914342
BioCyc:CBUR227377:GJ7S-824-MONOMER Uniprot:Q83DA9
Length = 331
Score = 236 (88.1 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 90/333 (27%), Positives = 151/333 (45%)
Query: 31 VTGAGGFIASHIARRLKSE--GHYIIASDWKKN--EHMTEDMFCHEFHLVDL----RVMD 82
V G G I SH RL E II ++ + E++ + + + D+ D
Sbjct: 11 VIGGAGLIGSHTVDRLLQEDVAEVIIYDNFVRGTRENLAQALRDPRTKIYDIGGDINQTD 70
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
KGVD VF+ AA + + + S N +FN+LE GVKR ++SS
Sbjct: 71 ILNTALKGVDGVFHFAA-LWLLQCYEYPRSAFQ-TNIQGTFNVLETCVAQGVKRLVFSSS 128
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG-RFHN 201
A +Y + LE ++ +A P + YG K+A E + Y +G+ VG R+ N
Sbjct: 129 ASVYGD--ALEEPMT----EAHPFNSRTFYGATKIAGEAMATAYHHRYGLPF-VGLRYMN 181
Query: 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKFE---MWGDGLQTRSFTFIDECVEGVLRLTKS 258
+YGP ++G A A K L + DK + ++GDG Q F ++++C + K+
Sbjct: 182 VYGPRQDYRG---AYIAVIMKMLDALDKGQPMTLYGDGSQAYDFVYVEDCAAANICAMKA 238
Query: 259 D-FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP-GPEGVRGRNSDNTLIKEKLGW 316
D E N+G+ + S+ E+A+ + I +P G V+ R E++G+
Sbjct: 239 DTVDEYYNVGTGKRTSILELAKEIQKITGTSDNIQFLPQGTTFVKNRIGCPKKAAEQIGF 298
Query: 317 APSMKLKDGLRITYFWIKEQI-EKEKTQGIDLS 348
+ L +GL+ W + I E E+ + + +S
Sbjct: 299 KAEVGLTEGLQRLIEWRRSHIAEVEQRREVAIS 331
>TIGR_CMR|CBU_0677 [details] [associations]
symbol:CBU_0677 "NAD dependent epimerase/dehydratase
family protein" species:227377 "Coxiella burnetii RSA 493"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009243 "O
antigen biosynthetic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HSSP:P09147
EMBL:AF387640 ProteinModelPortal:Q93N66 Uniprot:Q93N66
Length = 344
Score = 222 (83.2 bits), Expect = 2.1e-16, P = 2.1e-16
Identities = 89/309 (28%), Positives = 135/309 (43%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDL--RVMDNC-LKV 87
VTG GFI SH+ L G + D K H H + DL + D C L
Sbjct: 8 VTGGAGFIGSHMVDLLLDCGFQVRVIDNLKGGHRRN--LEHRANNPDLTFEIKDICELSA 65
Query: 88 T----KGVDHVFNLAADMGGMG-FIQSNHSVIMY--NNTMISFNMLEASRISGVKRFFYA 140
+ VD+VF+ A G+G + S + I Y N M + +LE +R + VK+ YA
Sbjct: 66 PHPLFENVDYVFHFA----GIGDIVPSIENPIDYLQTNVMGTVRVLECARAANVKKLVYA 121
Query: 141 SSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFH 200
+S+ Y +V +E P PQ Y L K EE H+ + +G+ R
Sbjct: 122 ASSSCYGL-----ADVPTREDH--PIAPQYPYALSKYLGEEAAFHWFQVYGLPVNSIRIF 174
Query: 201 NIYGPFGTWKGMEKAP-AAFCRKALTSTDK-FEMWGDGLQTRSFTFIDECVEGVLRLTKS 258
N YG G+ A F ++ L DK F + GDG Q R F ++ + L+ ++
Sbjct: 175 NAYGTRVRTTGVYGAVFGVFFKQKLA--DKPFTVVGDGTQRRDFLYVTDVARAFLKAAET 232
Query: 259 -DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWA 317
E N+G+ S+N + E++ E + +P PG +D + IK LGW
Sbjct: 233 RKVGETWNLGAGNPQSINRLVELI-GGEVEYIPKR--PGEPDCTW--ADISKIKRDLGWE 287
Query: 318 PSMKLKDGL 326
P++ DG+
Sbjct: 288 PTITFADGV 296
>TAIR|locus:2202960 [details] [associations]
symbol:RHM1 "rhamnose biosynthesis 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA;IMP] [GO:0050377
"UDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=IDA] [GO:0010315 "auxin
efflux" evidence=IMP] [GO:0051555 "flavonol biosynthetic process"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0009744 "response to sucrose
stimulus" evidence=RCA] [GO:0009813 "flavonoid biosynthetic
process" evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0009506 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010315 EMBL:AC007260
GO:GO:0051555 eggNOG:COG1091 GO:GO:0008831 GO:GO:0045226
EMBL:AY042833 EMBL:AY081471 IPI:IPI00543019 PIR:C96814
RefSeq:NP_177978.1 UniGene:At.198 UniGene:At.71030
ProteinModelPortal:Q9SYM5 SMR:Q9SYM5 IntAct:Q9SYM5 STRING:Q9SYM5
PaxDb:Q9SYM5 PRIDE:Q9SYM5 EnsemblPlants:AT1G78570.1 GeneID:844193
KEGG:ath:AT1G78570 TAIR:At1g78570 HOGENOM:HOG000167988
InParanoid:Q9SYM5 KO:K12450 OMA:IKFVDNR PhylomeDB:Q9SYM5
ProtClustDB:PLN02260 BioCyc:ARA:AT1G78570-MONOMER
BioCyc:MetaCyc:AT1G78570-MONOMER Genevestigator:Q9SYM5
GO:GO:0008460 GO:GO:0050377 GO:GO:0010280 GO:GO:0010253
TIGRFAMs:TIGR01181 Uniprot:Q9SYM5
Length = 669
Score = 218 (81.8 bits), Expect = 5.1e-15, P = 5.1e-15
Identities = 87/325 (26%), Positives = 146/325 (44%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIAS----DWKKN-EHMTEDMFCHEFHLV--DLRV 80
I +TGA GFIASH+A RL +S Y I D+ N +++ F V D+
Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68
Query: 81 MD--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRF 137
D N L +T+G+D + + AA N NN + +LEA +++G ++RF
Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ S+ +Y E + + + +A P + Y K +E L Y + +G+
Sbjct: 128 IHVSTDEVYGE---TDEDALVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRLT 256
R +N+YGP + EK F A+ + GDG RS+ + ++ E + L
Sbjct: 185 RGNNVYGPN---QFPEKLIPKFILLAMRG-QVLPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 257 KSDFREPVNIGSDEMVSMNEMA-EIVLSFE-DKKLPIHHIPG-PEGVRGRNSDNTLIKEK 313
K + NIG+ + +N++A +I F D + I + P + D+ +K K
Sbjct: 241 KGEVGHVYNIGTKKERRVNDVAKDICKLFNMDPEANIKFVDNRPFNDQRYFLDDQKLK-K 299
Query: 314 LGWAPSMKLKDGLRITYFWIKEQIE 338
LGW+ ++GL+ T W + E
Sbjct: 300 LGWSERTTWEEGLKKTMDWYTQNPE 324
>TAIR|locus:2050921 [details] [associations]
symbol:GAE4 "UDP-D-glucuronate 4-epimerase 4"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC002387 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376 EMBL:AY594693
EMBL:BT005652 EMBL:BT004225 IPI:IPI00535089 PIR:A84889
RefSeq:NP_182056.1 UniGene:At.66419 ProteinModelPortal:O22141
SMR:O22141 STRING:O22141 PaxDb:O22141 PRIDE:O22141
EnsemblPlants:AT2G45310.1 GeneID:819139 KEGG:ath:AT2G45310
TAIR:At2g45310 InParanoid:O22141 OMA:IFESANH PhylomeDB:O22141
BioCyc:MetaCyc:AT2G45310-MONOMER Genevestigator:O22141
Uniprot:O22141
Length = 437
Score = 213 (80.0 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 88/338 (26%), Positives = 150/338 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIA----SDW------KKNEHMTE--DMFCHEFH 74
+ + VTGA GF+ +H++ LK G +I +D+ + + E +F E
Sbjct: 97 ITVLVTGAAGFVGTHVSAALKRRGDGVIGLDNFNDYYDPSLKRARRALLERSGIFIVEGD 156
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR-ISG 133
+ D+ ++ K+ HV +LAA G+ + N S +++N N+LE + ++
Sbjct: 157 INDVELLRKLFKIVS-FTHVMHLAAQ-AGVRYAMENPSSYVHSNIAGFVNLLEICKSVNP 214
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+ASS+ +Y L T V E D +P Y K A EE+ Y +G+
Sbjct: 215 QPAIVWASSSSVYG----LNTKVPFSEKDKTD-QPASLYAATKKAGEEIAHTYNHIYGLS 269
Query: 194 CRVGRFHNIYGPFGTWKGMEKAPAAFCRKALT--STDKFEMWGDGLQTRSFTFIDECVEG 251
RF +YGP W + A F + L S FE G R FT+ID+ V+G
Sbjct: 270 LTGLRFFTVYGP---WGRPDMAYFFFTKDILKGKSISIFESANHGTVARDFTYIDDIVKG 326
Query: 252 VL-------RLTKSDFRE--PV-----NIGSDEMVSMNEMAEIV---LSFEDKKLPIHHI 294
L + T S ++ P N+G+ V ++++ I+ L + KK I +
Sbjct: 327 CLAALDTAEKSTGSGGKKRGPAQLRVFNLGNTSPVPVSDLVRILERQLKVKAKKNLIK-M 385
Query: 295 PGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
P V +++ +L + +LG+ P+ L+ GL+ W
Sbjct: 386 PRNGDVPFTHANISLAQRELGYKPTTDLQTGLKKFVRW 423
>TIGR_CMR|CJE_1612 [details] [associations]
symbol:CJE_1612 "GDP-L-fucose synthetase" species:195099
"Campylobacter jejuni RM1221" [GO:0009242 "colanic acid
biosynthetic process" evidence=ISS] [GO:0050577 "GDP-L-fucose
synthase activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000025 GenomeReviews:CP000025_GR
HOGENOM:HOG000168011 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GO:GO:0042350 RefSeq:YP_179593.1 ProteinModelPortal:Q5HSZ2
STRING:Q5HSZ2 GeneID:3232240 KEGG:cjr:CJE1612 PATRIC:20045021
BioCyc:CJEJ195099:GJC0-1642-MONOMER Uniprot:Q5HSZ2
Length = 349
Score = 142 (55.0 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 48/181 (26%), Positives = 81/181 (44%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+I + G G + S I R+LK G+ + +K + E L D + +
Sbjct: 6 KIYIAGHRGLVGSAILRKLKDNGYENLI--YKTHS---------ELDLTDQSAVKFFFEK 54
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
K D VF AA +GGM + + +Y+N I N++ S I+ VK+ + SS +YP
Sbjct: 55 EKP-DFVFLCAAKLGGMDAHRKFRAEFIYDNLQIQNNVIHQSYINNVKKLLFISSTSVYP 113
Query: 148 EFKQLETNVSLKESDAWPAEPQ---DAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
E L +KE + Q + Y + K+A ++C+ Y+ +G+ +YG
Sbjct: 114 EHASLP----IKEECLLSGKLQYLHEPYAIAKIAGMKMCEAYSDRYGVNFISVCPTTLYG 169
Query: 205 P 205
P
Sbjct: 170 P 170
Score = 113 (44.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 33/120 (27%), Positives = 59/120 (49%)
Query: 228 DKFEMWGDGLQTRSFTFIDE----CVE-----GVLRLTKSDFREP-VNIGSDEMVSMNEM 277
+ E+WG G R F + D+ C+ + + K D P +NIG ++ S+ E+
Sbjct: 227 NSIEIWGSGNPKREFLYSDDLANACIHIMQNINIEHINKIDRDNPHINIGPEKNYSIKEL 286
Query: 278 AEI---VLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 334
A + V+ FE + +++ P+G + + IK+ + W KL+DG+R T+ W K
Sbjct: 287 AYLLKTVIQFEGEFR--YNLSKPDGTYEKLTCCDKIKQ-MNWQAYTKLEDGIRSTFHWYK 343
>TAIR|locus:2099372 [details] [associations]
symbol:RHM3 "rhamnose biosynthesis 3" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010280
"UDP-L-rhamnose synthase activity" evidence=ISS;IDA] [GO:0010253
"UDP-rhamnose biosynthetic process" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005913 Pfam:PF01370 Pfam:PF04321
InterPro:IPR016040 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016829 EMBL:AP002061 GO:GO:0008831
GO:GO:0045226 HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260
GO:GO:0010280 GO:GO:0010253 eggNOG:COG1088 EMBL:AY078958
EMBL:AY142060 IPI:IPI00525100 RefSeq:NP_188097.1 UniGene:At.27812
ProteinModelPortal:Q9LH76 SMR:Q9LH76 IntAct:Q9LH76 STRING:Q9LH76
PaxDb:Q9LH76 PRIDE:Q9LH76 EnsemblPlants:AT3G14790.1 GeneID:820707
KEGG:ath:AT3G14790 TAIR:At3g14790 InParanoid:Q9LH76 OMA:TARMNNI
PhylomeDB:Q9LH76 Genevestigator:Q9LH76 GermOnline:AT3G14790
Uniprot:Q9LH76
Length = 664
Score = 214 (80.4 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 88/325 (27%), Positives = 143/325 (44%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIAS----DWKKN-EHMTEDMFCHEFHLV--DLRV 80
I +TGA GFIASH+A RL +S Y I D+ N +++ F V D+
Sbjct: 9 ILITGAAGFIASHVANRLVRSYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIAS 68
Query: 81 MD--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRF 137
D N L +T+ +D + + AA N NN + +LEA +++G ++RF
Sbjct: 69 ADLVNYLLITEEIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKVTGQIRRF 127
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ S+ +Y E + + S+ +A P + Y K +E L Y + +G+
Sbjct: 128 IHVSTDEVYGE---TDEDASVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 184
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRLT 256
R +N+YGP + EK F A+ + GDG RS+ + ++ E + L
Sbjct: 185 RGNNVYGPN---QFPEKLIPKFILLAMNGKP-LPIHGDGSNVRSYLYCEDVAEAFEVVLH 240
Query: 257 KSDFREPVNIGSDEMVSMNEMA-EIVLSFE-DKKLPIHHIPG-PEGVRGRNSDNTLIKEK 313
K + NIG+ + ++A +I F D I ++ P + D+ +K K
Sbjct: 241 KGEVNHVYNIGTTRERRVIDVANDISKLFGIDPDSTIQYVENRPFNDQRYFLDDQKLK-K 299
Query: 314 LGWAPSMKLKDGLRITYFWIKEQIE 338
LGW ++GLR T W E E
Sbjct: 300 LGWCERTNWEEGLRKTMEWYTENPE 324
>UNIPROTKB|P95780 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:210007
"Streptococcus mutans UA159" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103 EMBL:AE014133
GenomeReviews:AE014133_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305 KO:K01710
PANTHER:PTHR10366:SF41 EMBL:D78182 RefSeq:NP_721810.1 PDB:1KEP
PDB:1KET PDBsum:1KEP PDBsum:1KET ProteinModelPortal:P95780
SMR:P95780 EnsemblBacteria:EBSTRT00000013418 GeneID:1028708
KEGG:smu:SMU_1457 PATRIC:19664935 OMA:HEDWWKA
ProtClustDB:CLSK877134 EvolutionaryTrace:P95780 Uniprot:P95780
Length = 348
Score = 204 (76.9 bits), Expect = 3.7e-14, P = 3.7e-14
Identities = 86/353 (24%), Positives = 154/353 (43%)
Query: 24 SEKLRISVTGAGGFIAS---HIARRLKSEGHYIIASD--WKKNEHMTEDMFCHEFHLVDL 78
+E I VTG GFI S H + H + + N E++ LV
Sbjct: 2 TEYKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNRANLEEILGDRVELVVG 61
Query: 79 RVMDNCL--KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR 136
+ D+ L K+ D + + AA+ ++ + S +Y N + ++ +LEA+R + R
Sbjct: 62 DIADSELVDKLAAKADAIVHYAAESHNDNSLK-DPSPFIYTNFVGTYILLEAARKYDI-R 119
Query: 137 FFYASSACIYPEFKQLETNVSLKES--DAWPAE----PQDAYGLEKLASEELCKHYTKDF 190
F + S+ +Y + E E + + AE P Y K AS+ + K + + F
Sbjct: 120 FHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETKYNPSSPYSSTKAASDLIVKAWVRSF 179
Query: 191 GIECRVGRFHNIYGPFGTWKGMEK-APAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249
G++ + N YGP+ + +EK P + S K +++G+G R + ++
Sbjct: 180 GVKATISNCSNNYGPY---QHIEKFIPRQITN--ILSGIKPKLYGEGKNVRDWIHTNDHS 234
Query: 250 EGVLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLS-FEDKKLPIHHIPGPEGVRGRNS-D 306
GV LTK E IG+D + E+ E++L K H+ G R + D
Sbjct: 235 TGVWAILTKGRIGETYLIGADGEKNNKEVLELILEKMSQPKNAYDHVTDRAGHDLRYAID 294
Query: 307 NTLIKEKLGWAPSM-KLKDGLRITYFWIKEQIE--KEKTQGIDLSVYGSSKVV 356
+T ++E+LGW P ++GL T W E + K + + ++ + + K++
Sbjct: 295 STKLREELGWKPQFTNFEEGLEDTIKWYTEHEDWWKAEKEAVEANYAKTQKIL 347
>UNIPROTKB|Q489C2 [details] [associations]
symbol:CPS_0592 "Capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 193 (73.0 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 67/241 (27%), Positives = 107/241 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH----MTEDMFC---H-EFHLVDL 78
++ VTGA GFI S + RL + GH ++ D N++ + + H F + +
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGID-NINDYYDIALKQARLARIEHASFSFIKM 59
Query: 79 RVMD-NCLK---VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
+ D N + + D V +LAA G+ + N +N + N+LE R + V
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQ-AGVRYSIENPMAYADSNLIGHLNVLEGCRNNQV 118
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
K YASS+ +Y L V D P Y K ++E + Y+ + I
Sbjct: 119 KHLIYASSSSVYG----LNNKVPFSTKDTVD-HPVSLYAATKKSNELMAHSYSHLYNIPT 173
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254
RF +YG +W + AP F +K L D ++ +G R FT +D+ VEGV+R
Sbjct: 174 TGLRFFTVYG---SWGRPDMAPYIFTKKILNG-DTIDINNNGDMWRDFTHVDDIVEGVIR 229
Query: 255 L 255
+
Sbjct: 230 I 230
Score = 47 (21.6 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 265 NIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMK 321
NIG +S+ + + + L E KK PG V +D + + + P +
Sbjct: 259 NIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGD--VYQTYADTQDLFKATNYVPKIS 316
Query: 322 LKDGLRITYFWIKE 335
+K+G+ W K+
Sbjct: 317 VKEGVAELVVWFKD 330
>TIGR_CMR|CPS_0592 [details] [associations]
symbol:CPS_0592 "capsular polysaccharide biosynthesis
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] [GO:0045227 "capsule polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0045227 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:YP_267342.1
ProteinModelPortal:Q489C2 STRING:Q489C2 GeneID:3519977
KEGG:cps:CPS_0592 PATRIC:21464513 ProtClustDB:CLSK2396596
BioCyc:CPSY167879:GI48-679-MONOMER Uniprot:Q489C2
Length = 334
Score = 193 (73.0 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 67/241 (27%), Positives = 107/241 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH----MTEDMFC---H-EFHLVDL 78
++ VTGA GFI S + RL + GH ++ D N++ + + H F + +
Sbjct: 1 MKYLVTGAAGFIGSAVVERLCAAGHDVVGID-NINDYYDIALKQARLARIEHASFSFIKM 59
Query: 79 RVMD-NCLK---VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
+ D N + + D V +LAA G+ + N +N + N+LE R + V
Sbjct: 60 DIADRNVMAELFTAQQFDKVVHLAAQ-AGVRYSIENPMAYADSNLIGHLNVLEGCRNNQV 118
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
K YASS+ +Y L V D P Y K ++E + Y+ + I
Sbjct: 119 KHLIYASSSSVYG----LNNKVPFSTKDTVD-HPVSLYAATKKSNELMAHSYSHLYNIPT 173
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254
RF +YG +W + AP F +K L D ++ +G R FT +D+ VEGV+R
Sbjct: 174 TGLRFFTVYG---SWGRPDMAPYIFTKKILNG-DTIDINNNGDMWRDFTHVDDIVEGVIR 229
Query: 255 L 255
+
Sbjct: 230 I 230
Score = 47 (21.6 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 265 NIGSDEMVSMNEMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMK 321
NIG +S+ + + + L E KK PG V +D + + + P +
Sbjct: 259 NIGHGSPISLMDFVKAIEDELGIEAKKNFREMQPGD--VYQTYADTQDLFKATNYVPKIS 316
Query: 322 LKDGLRITYFWIKE 335
+K+G+ W K+
Sbjct: 317 VKEGVAELVVWFKD 330
>TIGR_CMR|CBU_0844 [details] [associations]
symbol:CBU_0844 "capsular polysaccharide biosynthesis
protein I" species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 HOGENOM:HOG000168000
KO:K08679 OMA:NSAYSAN RefSeq:NP_819864.2 ProteinModelPortal:Q83D94
GeneID:1208737 KEGG:cbu:CBU_0844 PATRIC:17930385
ProtClustDB:CLSK914357 BioCyc:CBUR227377:GJ7S-839-MONOMER
GO:GO:0003974 Uniprot:Q83D94
Length = 339
Score = 202 (76.2 bits), Expect = 5.7e-14, P = 5.7e-14
Identities = 75/253 (29%), Positives = 116/253 (45%)
Query: 26 KLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM----------FCH-EFH 74
K+R VTG GFI H+ +RL + G +I+ D N++ ++ F H FH
Sbjct: 5 KMRTLVTGCAGFIGFHLTKRLLARGDHILGLD-NLNDYYDVNLKEARLAQLKEFPHFSFH 63
Query: 75 LVDLRVMDNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF-NMLEASRI 131
+DL + + D V +LAA G+ + +N + +N ++ F ++LE R
Sbjct: 64 KLDLADRQGMTDLFQKHLFDTVVHLAAQ-AGVRYSLTNPYAYVDSN-LVGFAHILEGCRH 121
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG 191
VK +ASS+ +Y ++ ESD P Y K A+E + Y F
Sbjct: 122 QSVKHLVFASSSSVYGANEKYP----FSESDNVD-HPIALYAASKKANELMAHSYAHLFQ 176
Query: 192 IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDK-FEMWGDGLQTRSFTFIDECVE 250
+ C RF +YGP W + A F R L DK +++ G +R FT+ID+ V+
Sbjct: 177 LPCTGLRFFTVYGP---WGRPDMALFKFTRNLLA--DKPIDVYNHGKMSRDFTYIDDIVD 231
Query: 251 GVLRLTKSDFREP 263
G+L LT EP
Sbjct: 232 GIL-LTLDHPPEP 243
>UNIPROTKB|F1RP60 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM EMBL:CU986273
RefSeq:XP_003131096.2 Ensembl:ENSSSCT00000010407 GeneID:100517301
KEGG:ssc:100517301 Uniprot:F1RP60
Length = 355
Score = 201 (75.8 bits), Expect = 9.2e-14, P = 9.2e-14
Identities = 92/345 (26%), Positives = 154/345 (44%)
Query: 19 EPYWPSEKL--RISVTGAGGFIASHIARRLKSE-GHYIIAS----DW---KKNEHMTEDM 68
EP P R+ VTG GFIASH+ L + +Y+I + D+ KN D
Sbjct: 8 EPLGPPNSFAKRVLVTGGAGFIASHVIVSLVEDYPNYMIVNLDKLDYCASLKNLETISDK 67
Query: 69 FCHEFHLVDLRVMDNCLKV---TKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFN 124
++F D+ + +K+ T+ +D V + AA + F+++ Y N +
Sbjct: 68 QNYKFIQGDI-CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHV 124
Query: 125 MLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
+L A+ + V++F Y S+ +Y E + ES P +P + Y K A+E +
Sbjct: 125 LLSAAHEARVEKFIYVSTDEVYGGSLDKEFD----ESS--PKQPTNPYASSKAAAECFVQ 178
Query: 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244
Y + + + R N+YGP + EK F L K + G GLQTR+F +
Sbjct: 179 SYWERYKFPVVITRSSNVYGPH---QYPEKVIPKFI-SLLQHNRKCCIHGSGLQTRNFLY 234
Query: 245 IDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRG 302
+ VE L L K E NIG++ +S+ ++A E++ ++ K + V
Sbjct: 235 ATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETKSESEMENWVDYVND 294
Query: 303 RNSDNT---LIKEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 341
R +++ + EK LGW P + K+G++ T W +E K
Sbjct: 295 RPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWK 339
>TAIR|locus:2024902 [details] [associations]
symbol:MUM4 "MUCILAGE-MODIFIED 4" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA;ISS]
[GO:0008152 "metabolic process" evidence=ISS] [GO:0008831
"dTDP-4-dehydrorhamnose reductase activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0010192 "mucilage
biosynthetic process" evidence=IMP] [GO:0010214 "seed coat
development" evidence=IMP] [GO:0010280 "UDP-L-rhamnose synthase
activity" evidence=ISS;IDA] [GO:0010253 "UDP-rhamnose biosynthetic
process" evidence=IDA] [GO:0010489
"UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity" evidence=TAS]
[GO:0010490 "UDP-4-keto-rhamnose-4-keto-reductase activity"
evidence=TAS] [GO:0050377 "UDP-glucose 4,6-dehydratase activity"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 InterPro:IPR005913
Pfam:PF01370 Pfam:PF04321 InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0010214 EMBL:AC018748
EMBL:AC024260 GO:GO:0010192 GO:GO:0008831 GO:GO:0045226
HOGENOM:HOG000167988 KO:K12450 ProtClustDB:PLN02260 GO:GO:0008460
GO:GO:0050377 GO:GO:0010280 GO:GO:0010253 TIGRFAMs:TIGR01181
EMBL:AJ565874 EMBL:AY328518 IPI:IPI00522138 PIR:B96575
RefSeq:NP_564633.2 UniGene:At.20215 ProteinModelPortal:Q9LPG6
SMR:Q9LPG6 STRING:Q9LPG6 PaxDb:Q9LPG6 PRIDE:Q9LPG6
EnsemblPlants:AT1G53500.1 GeneID:841785 KEGG:ath:AT1G53500
TAIR:At1g53500 eggNOG:COG1088 InParanoid:Q9LPG6 OMA:CESHKPE
PhylomeDB:Q9LPG6 BioCyc:MetaCyc:AT1G53500-MONOMER
Genevestigator:Q9LPG6 GermOnline:AT1G53500 GO:GO:0010489
GO:GO:0010490 Uniprot:Q9LPG6
Length = 667
Score = 203 (76.5 bits), Expect = 2.6e-13, P = 2.6e-13
Identities = 85/325 (26%), Positives = 144/325 (44%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIAS----DWKKNEHMTEDMFCH-EFHLV--DLRV 80
I +TGA GFIASH+A RL ++ Y I D+ + + F F V D+
Sbjct: 11 ILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSDLKNLDPSFSSPNFKFVKGDIAS 70
Query: 81 MD--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKRF 137
D N L +T+ +D + + AA N NN + +LEA +++G ++RF
Sbjct: 71 DDLVNYLLITENIDTIMHFAAQTHVDNSF-GNSFEFTKNNIYGTHVLLEACKVTGQIRRF 129
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ S+ +Y E + + ++ +A P + Y K +E L Y + +G+
Sbjct: 130 IHVSTDEVYGE---TDEDAAVGNHEASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITT 186
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV-LRLT 256
R +N+YGP + EK F A+ S + GDG RS+ + ++ E + L
Sbjct: 187 RGNNVYGPN---QFPEKMIPKFILLAM-SGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLH 242
Query: 257 KSDFREPVNIGSDEMVSMNEMA-EIVLSF-EDKKLPIHHIPG-PEGVRGRNSDNTLIKEK 313
K + N+G+ + ++A +I F +D + I + P + D+ +K K
Sbjct: 243 KGEIGHVYNVGTKRERRVIDVARDICKLFGKDPESSIQFVENRPFNDQRYFLDDQKLK-K 301
Query: 314 LGWAPSMKLKDGLRITYFWIKEQIE 338
LGW +DGL+ T W + E
Sbjct: 302 LGWQERTNWEDGLKKTMDWYTQNPE 326
>UNIPROTKB|Q0BYW6 [details] [associations]
symbol:HNE_2639 "UDP-glucuronate 5'-epimerase"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0050379
"UDP-glucuronate 5'-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009103 EMBL:CP000158 GenomeReviews:CP000158_GR
HOGENOM:HOG000168000 KO:K08679 GO:GO:0050379 RefSeq:YP_761327.1
ProteinModelPortal:Q0BYW6 STRING:Q0BYW6 GeneID:4289771
KEGG:hne:HNE_2639 PATRIC:32218139 OMA:NSAYSAN
BioCyc:HNEP228405:GI69-2655-MONOMER Uniprot:Q0BYW6
Length = 334
Score = 192 (72.6 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 82/306 (26%), Positives = 136/306 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKK---NEHMTEDMFCH-----EFHLVDL 78
++I VTGA GFI S +A RL EGH + D + + ED +F L +
Sbjct: 1 MKILVTGAAGFIGSEMALRLLKEGHSVTGVDCFTPYYDPQLKEDRAARLTAFDDFRLERI 60
Query: 79 RVMDN-CLKVTKGVDH---VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
R+ D+ ++ D V + AA G+ + + + N + SFN+++ SR G
Sbjct: 61 RIEDSEAMEAVFQRDTPEMVLHFAAQ-AGVRYSLDHPRDFIDANIVGSFNIIDLSRRHGT 119
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
+ AS++ Y ++ +E D+ P P Y KLASE + + +G+
Sbjct: 120 QHLVMASTSSAYGANQKFP----FEERDSAPY-PLTIYAATKLASELIAHSHAHLYGVPT 174
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254
V RF ++YGP W + A F K +++ G R FT+ID+ VE + R
Sbjct: 175 TVLRFFSVYGP---WGRPDMAFFLFTDKIFKG-QPIDVFNHGDLLRDFTYIDDLVEAIRR 230
Query: 255 LTKSDFREPVNIGSDEMV--SMNEMAEIVLSFEDKKLPIH---HIPGPEGVRGRNSDNTL 309
L + PV +G+ + S++ +A L P+ +I EG GR ++ +
Sbjct: 231 LMDTP---PV-VGNHIIRGDSLSPVAPYRLVNIGNASPVRLMDYIEAIEGAIGRKAEKNM 286
Query: 310 IKEKLG 315
I + G
Sbjct: 287 IDMQPG 292
>TAIR|locus:2126846 [details] [associations]
symbol:GAE3 "UDP-D-glucuronate 4-epimerase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0016020 "membrane" evidence=TAS] [GO:0050378
"UDP-glucuronate 4-epimerase activity" evidence=ISS]
InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713
InterPro:IPR016040 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016020 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
GO:GO:0032580 GO:GO:0044237 EMBL:AL161471 EMBL:AF069299
HOGENOM:HOG000168000 KO:K08679 ProtClustDB:CLSN2679288
GO:GO:0050378 EMBL:BT026487 IPI:IPI00527699 PIR:T01339
RefSeq:NP_191922.1 UniGene:At.27610 HSSP:Q14376
ProteinModelPortal:O81312 SMR:O81312 STRING:O81312 PaxDb:O81312
PRIDE:O81312 EnsemblPlants:AT4G00110.1 GeneID:828145
KEGG:ath:AT4G00110 TAIR:At4g00110 InParanoid:O81312 OMA:KWWSRVL
PhylomeDB:O81312 Genevestigator:O81312 Uniprot:O81312
Length = 430
Score = 195 (73.7 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 84/335 (25%), Positives = 145/335 (43%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIA----SDW------KKNEHMTE--DMFCHEFHLV 76
+ VTGA GF+ +H++ LK G ++ +D+ + + + E +F E +
Sbjct: 93 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDPSLKRARQALLERSGVFVVEGDIN 152
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK- 135
D ++ +V HV +LAA G+ + N S +++N N+LE + + +
Sbjct: 153 DAALLKKLFEVVP-FTHVMHLAAQ-AGVRYAMENPSSYVHSNIAGFVNLLEVCKSANPQP 210
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+ASS+ +Y L T V E D +P Y K A EE+ Y +G+
Sbjct: 211 AIVWASSSSVYG----LNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGLSLT 265
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALT--STDKFEMWGDGLQTRSFTFIDECVEGVL 253
RF +YGP W + A F R L + FE G R FT+ID+ V+G L
Sbjct: 266 GLRFFTVYGP---WGRPDMAYFFFTRDILKGKAISIFEGVNHGTVARDFTYIDDIVKGCL 322
Query: 254 -------RLTKSDFREP-------VNIGSDEMVSMNEMAEIV--LSFEDKKLPIHHIPGP 297
+ T S ++ N+G+ V + ++ I+ L K I +P
Sbjct: 323 GALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVTILERLLKVKAKRNIMKLPRN 382
Query: 298 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
V+ +++ + + +LG+ P+ L+ GL+ W
Sbjct: 383 GDVQFTHANISSAQRELGYKPTTDLQTGLKKFARW 417
>TAIR|locus:2139134 [details] [associations]
symbol:GAE5 "UDP-D-glucuronate 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0016036 "cellular response to phosphate
starvation" evidence=RCA] [GO:0019375 "galactolipid biosynthetic
process" evidence=RCA] [GO:0042631 "cellular response to water
deprivation" evidence=RCA] [GO:0005768 "endosome" evidence=IDA]
[GO:0005802 "trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161533 EMBL:AL080318 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 HSSP:Q14376
EMBL:AY050993 EMBL:AY150403 IPI:IPI00529597 PIR:T48135
RefSeq:NP_192962.1 UniGene:At.48849 UniGene:At.66589
ProteinModelPortal:Q9STI6 SMR:Q9STI6 STRING:Q9STI6 PRIDE:Q9STI6
EnsemblPlants:AT4G12250.1 GeneID:826833 KEGG:ath:AT4G12250
TAIR:At4g12250 InParanoid:Q9STI6 OMA:RAYRQQM PhylomeDB:Q9STI6
Genevestigator:Q9STI6 Uniprot:Q9STI6
Length = 436
Score = 194 (73.4 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 93/360 (25%), Positives = 157/360 (43%)
Query: 8 YGAYTYEELEREPYWPSEK--LRISVTGAGGFIASHIARRLKSEGHYIIASD-------- 57
YG +E+ R+ P L + VTGA GF+ +H++ L+ G ++ D
Sbjct: 75 YGGSHWEKQVRKSARPRSHGGLTVLVTGASGFVGTHVSIALRRRGDGVLGLDNFNRYYDP 134
Query: 58 -WKK-NEHMTE--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSV 113
K+ + + E +F E + D ++ V HV +LAA G +Q+ S
Sbjct: 135 KLKRARQGLLERSGVFVVEGDINDAVLLRKLFDVVL-FTHVMHLAAQAGVRYAMQNPGSY 193
Query: 114 IMYNNTMISF-NMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDA 171
+ N+ + F N+LE S+ + + +ASS+ +Y L + V E D +P
Sbjct: 194 V--NSNIAGFVNLLEVSKSANPQPAIVWASSSSVYG----LNSKVPFSEKDRTD-QPASL 246
Query: 172 YGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALT--STDK 229
Y K A E + Y +G+ RF +YGP W + A F + L +
Sbjct: 247 YAATKKAGEGIAHTYNHIYGLSLTGLRFFTVYGP---WGRPDMAYFFFTKDILKGKTITV 303
Query: 230 FEMWGDGLQTRSFTFIDECVEGVL-------RLTKSDFRE--PV-----NIGSDEMVSMN 275
FE G R FT+ID+ V+G L + T S ++ P N+G+ V +
Sbjct: 304 FESPDKGSVARDFTYIDDIVKGCLGALDTAEKSTGSGGKKKGPAMFRIYNLGNTSPVPVT 363
Query: 276 EMAEIV---LSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
++ I+ L + KK I +P V +++ TL + +LG+ P++ L+ GL+ W
Sbjct: 364 KLVTILEKLLKMKAKK-KIMPLPRNGDVEFTHANITLAQAELGYKPAVDLETGLKKFVKW 422
>UNIPROTKB|P29782 [details] [associations]
symbol:strE "dTDP-glucose 4,6-dehydratase" species:1911
"Streptomyces griseus" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0019872 "streptomycin biosynthetic
process" evidence=IGI] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00066
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0019872 GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 PANTHER:PTHR10366:SF41 EMBL:X62567 PIR:S18617
ProteinModelPortal:P29782 SMR:P29782 Uniprot:P29782
Length = 328
Score = 178 (67.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 68/250 (27%), Positives = 111/250 (44%)
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACI 145
+V G D V +LAA+ + + SV + N + +L+A+ GV F S+ +
Sbjct: 71 RVMAGQDQVVHLAAE-SHVDRSLLDASVFVRTNVHGTQTLLDAATRHGVASFVQVSTDEV 129
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
Y LE S E + P P Y K + + L + G++ RV R N YGP
Sbjct: 130 YGS---LEHG-SWTEDE--PLRPNSPYSASKASGDLLALAHHVSHGLDVRVTRCSNNYGP 183
Query: 206 FGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL-TKSDFREPV 264
+ EK F L + ++GDGL R + +D+ V G+ + T+
Sbjct: 184 R---QFPEKLIPRFIT-LLMDGHRVPLYGDGLNVREWLHVDDHVRGIEAVRTRGRAGRVY 239
Query: 265 NIGSDEMVSMNEMAEIVLSFEDKKL-PIHHIPGPEGVRGRNS-DNTLIKEKLGWAPSMKL 322
NIG +S E+ ++L + ++ +G R + D+T I+ +LG+AP++ L
Sbjct: 240 NIGGGATLSNKELVGLLLEAAGADWGSVEYVEDRKGHDRRYAVDSTRIQRELGFAPAVDL 299
Query: 323 KDGLRITYFW 332
DGL T W
Sbjct: 300 ADGLAATVAW 309
Score = 49 (22.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 11/20 (55%), Positives = 11/20 (55%)
Query: 31 VTGAGGFIASHIARRLKSEG 50
VTGA GFI S R L G
Sbjct: 7 VTGAAGFIGSQYVRTLLGPG 26
>UNIPROTKB|Q47WH1 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase family
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 EMBL:CP000083
GenomeReviews:CP000083_GR HOGENOM:HOG000168011 KO:K02377
OMA:ASVHVMN RefSeq:YP_270851.1 ProteinModelPortal:Q47WH1
STRING:Q47WH1 GeneID:3522019 KEGG:cps:CPS_4200 PATRIC:21471263
ProtClustDB:CLSK2768411 BioCyc:CPSY167879:GI48-4210-MONOMER
Uniprot:Q47WH1
Length = 313
Score = 188 (71.2 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 86/335 (25%), Positives = 149/335 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
++I +TGA G + +I +AS K++H +L+D L
Sbjct: 1 MKILLTGANGMVGKNILE---------LAS---KHQHTFLTPSSKVLNLLDAASTQAYL- 47
Query: 87 VTKGVDHVFNLAADMGGMGFIQSN--HSV-IMYNNTMISFNMLEASRISGVKRFFYASSA 143
V D + + A +GG IQ+N H V + +N + N+L +++ G+K+F SS+
Sbjct: 48 VEHKPDMIIHAAGVVGG---IQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSS 104
Query: 144 CIYPE--FKQLETNVSLKESDAWPAEP-QDAYGLEKLASEELCKHYTKDFG-------IE 193
C+YP L + LK EP + Y L K+AS LC++ + + I
Sbjct: 105 CMYPRDALNPLSEELILKGE----LEPTNEGYALAKIASTRLCEYISHEEPELLYKTIIP 160
Query: 194 CRV-GRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDEC 248
C + GR H+ + P + PA RK + + K ++WGDG R F + +
Sbjct: 161 CNLYGR-HDKFSPHNS----HMIPAVI-RKVIDAKQKDLTEIDIWGDGKARREFMYAGDL 214
Query: 249 VEGVLRLTKSDFREP--VNIGSDEMVSMNE----MAEIVLSFEDKKLPIHHIPGPEGVRG 302
+ + + R P +N+G E ++N+ +AEI+ F H + P G++
Sbjct: 215 ADFIFYAIANFSRMPQNLNVGLGEDFTINDYYQRIAEII-GFSGTFK--HDLTKPVGMKQ 271
Query: 303 RNSDNTLIKEKLGWAPSMKLKDGLRITY-FWIKEQ 336
+ D+ + GW+ L +GL+ T F++ EQ
Sbjct: 272 KLIDDNKLNA-FGWSYKTDLTEGLKNTVQFFLSEQ 305
>TIGR_CMR|CPS_4200 [details] [associations]
symbol:CPS_4200 "NAD-dependent epimerase/dehydratase
family protein" species:167879 "Colwellia psychrerythraea 34H"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0009225
"nucleotide-sugar metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:CP000083 GenomeReviews:CP000083_GR
HOGENOM:HOG000168011 KO:K02377 OMA:ASVHVMN RefSeq:YP_270851.1
ProteinModelPortal:Q47WH1 STRING:Q47WH1 GeneID:3522019
KEGG:cps:CPS_4200 PATRIC:21471263 ProtClustDB:CLSK2768411
BioCyc:CPSY167879:GI48-4210-MONOMER Uniprot:Q47WH1
Length = 313
Score = 188 (71.2 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 86/335 (25%), Positives = 149/335 (44%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
++I +TGA G + +I +AS K++H +L+D L
Sbjct: 1 MKILLTGANGMVGKNILE---------LAS---KHQHTFLTPSSKVLNLLDAASTQAYL- 47
Query: 87 VTKGVDHVFNLAADMGGMGFIQSN--HSV-IMYNNTMISFNMLEASRISGVKRFFYASSA 143
V D + + A +GG IQ+N H V + +N + N+L +++ G+K+F SS+
Sbjct: 48 VEHKPDMIIHAAGVVGG---IQANMAHPVKFLVDNMQMGLNILNSAKNCGIKQFLNLSSS 104
Query: 144 CIYPE--FKQLETNVSLKESDAWPAEP-QDAYGLEKLASEELCKHYTKDFG-------IE 193
C+YP L + LK EP + Y L K+AS LC++ + + I
Sbjct: 105 CMYPRDALNPLSEELILKGE----LEPTNEGYALAKIASTRLCEYISHEEPELLYKTIIP 160
Query: 194 CRV-GRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDK----FEMWGDGLQTRSFTFIDEC 248
C + GR H+ + P + PA RK + + K ++WGDG R F + +
Sbjct: 161 CNLYGR-HDKFSPHNS----HMIPAVI-RKVIDAKQKDLTEIDIWGDGKARREFMYAGDL 214
Query: 249 VEGVLRLTKSDFREP--VNIGSDEMVSMNE----MAEIVLSFEDKKLPIHHIPGPEGVRG 302
+ + + R P +N+G E ++N+ +AEI+ F H + P G++
Sbjct: 215 ADFIFYAIANFSRMPQNLNVGLGEDFTINDYYQRIAEII-GFSGTFK--HDLTKPVGMKQ 271
Query: 303 RNSDNTLIKEKLGWAPSMKLKDGLRITY-FWIKEQ 336
+ D+ + GW+ L +GL+ T F++ EQ
Sbjct: 272 KLIDDNKLNA-FGWSYKTDLTEGLKNTVQFFLSEQ 305
>TIGR_CMR|GSU_2241 [details] [associations]
symbol:GSU_2241 "capsular polysaccharide biosynthesis
protein I" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000271 "polysaccharide biosynthetic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237 GO:GO:0016857
HOGENOM:HOG000168000 KO:K08679 OMA:NTAMPFS RefSeq:NP_953290.1
ProteinModelPortal:Q74AV9 GeneID:2687517 KEGG:gsu:GSU2241
PATRIC:22027337 ProtClustDB:CLSK746800
BioCyc:GSUL243231:GH27-2213-MONOMER Uniprot:Q74AV9
Length = 336
Score = 189 (71.6 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 68/241 (28%), Positives = 106/241 (43%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHE---------FHLVDLR 79
I VTGA GFI H+ +RL G ++ D N++ ++ F V
Sbjct: 4 ILVTGAAGFIGFHLTKRLLDRGDRVVGLD-NLNDYYDVNLKLDRLRQLEGREGFSFVRTS 62
Query: 80 VMDNC----LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISF-NMLEASRISGV 134
+ D L + D V NLAA G I + H+ + ++ ++ F N+LE R GV
Sbjct: 63 LADRPALEDLFAGQRFDVVVNLAAQAGVRYSITNPHAYV--DSNLVGFINILEGCRHHGV 120
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
K YASS+ +Y + ++ D P Y K A+E + Y+ +G+
Sbjct: 121 KHLVYASSSSVYGANTAMPFSIH-HNVD----HPVSLYAATKKANELMAHTYSSLYGLPT 175
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR 254
RF +YGP W + A F KA+ +++ G R FT++D+ VEGV R
Sbjct: 176 TGLRFFTVYGP---WGRPDMALFLFT-KAILEGRPIDVYNFGKMQRDFTYVDDIVEGVTR 231
Query: 255 L 255
+
Sbjct: 232 V 232
>TAIR|locus:2025472 [details] [associations]
symbol:GAE2 "UDP-D-glucuronate 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] InterPro:IPR001509 InterPro:IPR008089 Pfam:PF01370
PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0005975 GO:GO:0032580
GO:GO:0044237 EMBL:AC020622 HOGENOM:HOG000168000 KO:K08679
ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AF334734 EMBL:AY084754
EMBL:AK228396 IPI:IPI00543208 PIR:A86152 RefSeq:NP_171702.1
UniGene:At.17005 ProteinModelPortal:Q9LPC1 SMR:Q9LPC1 STRING:Q9LPC1
PaxDb:Q9LPC1 PRIDE:Q9LPC1 EnsemblPlants:AT1G02000.1 GeneID:839289
KEGG:ath:AT1G02000 TAIR:At1g02000 InParanoid:Q9LPC1 OMA:LFKFVDA
PhylomeDB:Q9LPC1 Genevestigator:Q9LPC1 Uniprot:Q9LPC1
Length = 434
Score = 192 (72.6 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 83/335 (24%), Positives = 143/335 (42%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIA----SDW------KKNEHMTE--DMFCHEFHLV 76
+ VTGA GF+ +H++ LK G ++ +D+ + + + E +F E +
Sbjct: 94 VLVTGAAGFVGTHVSAALKRRGDGVLGLDNFNDYYDTSLKRSRQALLERSGVFIVEGDIN 153
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK- 135
DL ++ +V HV +LAA G+ + N +++N N+LE + + +
Sbjct: 154 DLSLLKKLFEVVP-FTHVMHLAAQ-AGVRYAMENPGSYVHSNIAGFVNLLEVCKSANPQP 211
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+ASS+ +Y L T V E D +P Y K A EE+ Y +G+
Sbjct: 212 AIVWASSSSVYG----LNTKVPFSEKDRTD-QPASLYAATKKAGEEIAHTYNHIYGLSLT 266
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALT--STDKFEMWGDGLQTRSFTFIDECVEGVL 253
RF +YGP W + A F R L + FE G R FT+ID+ V+G L
Sbjct: 267 GLRFFTVYGP---WGRPDMAYFFFTRDILKGKAISIFEGANHGTVARDFTYIDDIVKGCL 323
Query: 254 -------RLTKSDFREP-------VNIGSDEMVSMNEMAEIV--LSFEDKKLPIHHIPGP 297
+ T S ++ N+G+ V + ++ I+ L K + +P
Sbjct: 324 GALDTAEKSTGSGGKKRGAAQLRVFNLGNTSPVPVTDLVSILERLLKVKAKRNMMKLPRN 383
Query: 298 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
V +++ + + + G+ PS L+ GL+ W
Sbjct: 384 GDVPFTHANISSAQREFGYKPSTDLQTGLKKFVRW 418
>UNIPROTKB|E2QWQ8 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 EMBL:AAEX03013308
RefSeq:XP_542640.3 Ensembl:ENSCAFT00000008577 GeneID:485521
KEGG:cfa:485521 Uniprot:E2QWQ8
Length = 355
Score = 189 (71.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 89/345 (25%), Positives = 153/345 (44%)
Query: 19 EPYWPSEKL--RISVTGAGGFIASHIARRLKSE-GHYIIAS----DW---KKNEHMTEDM 68
EP P R+ VTG GFIASH+ L + +Y+I + D+ KN +
Sbjct: 8 EPLGPPSSFAKRLLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLETISNK 67
Query: 69 FCHEFHLVDLRVMDNCLKV---TKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFN 124
++F D+ + +K+ T+ +D V + AA + F+++ Y N +
Sbjct: 68 QNYKFIQGDI-CNSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHV 124
Query: 125 MLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
++ A+ + V++F Y S+ +Y E + ES P +P + Y K A+E +
Sbjct: 125 LVSAAHEARVEKFIYVSTDEVYGGSLDKEFD----ESS--PKQPTNPYASSKAAAECFVQ 178
Query: 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244
Y + + + R N+YGP + EK F L K + G GLQTR+F +
Sbjct: 179 SYWERYKFPAVITRSSNVYGPH---QYPEKVIPKFI-SLLQHNRKCCIHGSGLQTRNFLY 234
Query: 245 IDECVEGVLR-LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRG 302
+ VE L L K E NIG++ +S+ ++A E++ ++ + V
Sbjct: 235 ATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETSSESEMETWVDYVND 294
Query: 303 RNSDNT---LIKEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 341
R +++ + EK LGW P + K+G++ T W +E K
Sbjct: 295 RPTNDMRYPMKSEKIQGLGWRPKVPWKEGIKKTIDWYRENFHNWK 339
>WB|WBGene00015298 [details] [associations]
symbol:C01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0040011 GeneTree:ENSGT00530000063128 KO:K12450 GO:GO:0008460
eggNOG:COG1088 OMA:TARMNNI PANTHER:PTHR10366:SF41 HSSP:P26391
EMBL:FO080258 PIR:T15370 RefSeq:NP_001040727.1
ProteinModelPortal:Q17556 SMR:Q17556 STRING:Q17556
World-2DPAGE:0020:Q17556 PaxDb:Q17556 EnsemblMetazoa:C01F1.3a
GeneID:173762 KEGG:cel:CELE_C01F1.3 UCSC:C01F1.3a CTD:173762
WormBase:C01F1.3a HOGENOM:HOG000017218 InParanoid:Q17556
NextBio:880983 ArrayExpress:Q17556 Uniprot:Q17556
Length = 631
Score = 192 (72.6 bits), Expect = 4.2e-12, P = 4.2e-12
Identities = 84/353 (23%), Positives = 143/353 (40%)
Query: 29 ISVTGAGGFIASHIARRLKSE---------GHYIIASDWKKNEHMTEDMFCHEFHLVDLR 79
+ +TG GFI S+ + I+ SD + + ++ L D++
Sbjct: 8 VVITGGCGFIGSNFVNYIHDAWPTCNFVNIDKLILNSDTQNVAESVRNSPRYKLVLTDIK 67
Query: 80 VMDNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG-VKR 136
L V + +D V + AAD + NN + LE R G +KR
Sbjct: 68 NEAAILNVFEQNEIDTVIHFAADCTSTRCYNETAEAVQ-NNVLSFIQFLETVRTYGKIKR 126
Query: 137 FFYASSACIYPEFKQLETNVSLKE-SDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
F + S+ +Y + E E S P P Y K+A E + Y + +
Sbjct: 127 FVHISTDEVYGDSDLSENEQGKVEFSRLVPGNP---YAATKIAGEAYVRAYQTQYNLPIV 183
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
R +NIYGP W ++ P F A + + + G G Q RS+ F+D+ G+ +
Sbjct: 184 TARMNNIYGP-NQWD-VKVVPR-FIEIAKVRGE-YTIQGSGKQLRSWLFVDDASAGLKAV 239
Query: 256 T-KSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPGPEGVRGR--NSDNTLI- 310
K + E N+G+ ++ ++A+ + D +L H P + + R N LI
Sbjct: 240 CEKGELHEIYNLGTYYEKNVADLAKTIQEEVDLQLGRAHEPPKYKSIPDRPYNDLRYLIS 299
Query: 311 ----KEKLGWAPSMKLKDGLRITYFWIKEQIEKEKTQGIDLSVYGSSKVVGTQ 359
K LGW P+ DG+R T + +++ K + +++YG VG +
Sbjct: 300 IEKAKNDLGWEPTTSFDDGMRHT---VASALKEHKHVKMHVAIYGGKGYVGQE 349
>UNIPROTKB|O95455 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AL359708 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
CTD:23483 HOVERGEN:HBG007741 OrthoDB:EOG4PVP08 EMBL:AJ006068
EMBL:AF048686 EMBL:AL139318 EMBL:BC033675 IPI:IPI00003774
RefSeq:NP_055120.1 UniGene:Hs.12393 ProteinModelPortal:O95455
SMR:O95455 IntAct:O95455 MINT:MINT-4773441 STRING:O95455
PhosphoSite:O95455 PRIDE:O95455 DNASU:23483 Ensembl:ENST00000261296
GeneID:23483 KEGG:hsa:23483 UCSC:uc001vlw.3 GeneCards:GC13M095226
HGNC:HGNC:20324 HPA:HPA039927 HPA:HPA040857 neXtProt:NX_O95455
PharmGKB:PA128395791 InParanoid:O95455 PhylomeDB:O95455
GenomeRNAi:23483 NextBio:45843 ArrayExpress:O95455 Bgee:O95455
CleanEx:HS_TGDS Genevestigator:O95455 GermOnline:ENSG00000088451
Uniprot:O95455
Length = 350
Score = 184 (69.8 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 86/334 (25%), Positives = 150/334 (44%)
Query: 28 RISVTGAGGFIASH-IARRLKSEGHYIIAS----DW---KKNEHMTEDMFCHEFHLVDLR 79
R+ VTG GFIASH I ++ +Y+I + D+ KN + ++F D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI- 77
Query: 80 VMDNCLKV---TKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
+ +K+ T+ +D V + AA + F+++ Y N + ++ A+ + V+
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVSAAHEARVE 135
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+F Y S+ +Y E + ES P +P + Y K A+E + Y + +
Sbjct: 136 KFIYVSTDEVYGGSLDKEFD----ESS--PKQPTNPYASSKAAAECFVQSYWEQYKFPVV 189
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR- 254
+ R N+YGP + EK F L K + G GLQTR+F + + VE L
Sbjct: 190 ITRSSNVYGPH---QYPEKVIPKFI-SLLQHNRKCCIHGSGLQTRNFLYATDVVEAFLTV 245
Query: 255 LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSDNT---LI 310
L K E NIG++ +S+ ++A E++ ++ + V R +++ +
Sbjct: 246 LKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVNDRPTNDMRYPMK 305
Query: 311 KEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 341
EK LGW P + K+G++ T W +E K
Sbjct: 306 SEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWK 339
>UNIPROTKB|Q8E8H8 [details] [associations]
symbol:wcvA "UDP-glucuronate 4-epimerase WcvA"
species:211586 "Shewanella oneidensis MR-1" [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 182 (69.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 62/242 (25%), Positives = 109/242 (45%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM---------FCHEFHLVD 77
++ VTGA GFI +++++RL + GH ++ D N++ + FH +
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGID-NLNDYYDVALKLARLAPLEALSNFHFIK 59
Query: 78 LRVMDN----CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG 133
L + D L +G V +LAA G+ + N +N + +LE R
Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQ-AGVRYSLDNPLAYADSNLVGHLTILEGCRHHK 118
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
++ YASS+ +Y L + D+ P Y K A+E + Y+ + +
Sbjct: 119 IEHLVYASSSSVYG----LNQKMPFSTEDSVD-HPISLYAATKKANELMSHTYSHLYQLP 173
Query: 194 CRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253
RF +YGP W + A F KA+ + + +++ G +R FT+ID+ VEG++
Sbjct: 174 TTGLRFFTVYGP---WGRPDMALFKFT-KAILAGETIDVYNHGDLSRDFTYIDDIVEGII 229
Query: 254 RL 255
R+
Sbjct: 230 RV 231
>TIGR_CMR|SO_4686 [details] [associations]
symbol:SO_4686 "NAD dependent epimerase/dehydratase family
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0003824
"catalytic activity" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0009243 "O antigen
biosynthetic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR HOGENOM:HOG000168000 KO:K08679
GO:GO:0050378 OMA:NTAMPFS GO:GO:0009243 HSSP:P27830
RefSeq:NP_720202.1 ProteinModelPortal:Q8E8H8 GeneID:1172268
KEGG:son:SO_4686 PATRIC:23529037 ProtClustDB:CLSK907767
Uniprot:Q8E8H8
Length = 335
Score = 182 (69.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 62/242 (25%), Positives = 109/242 (45%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDM---------FCHEFHLVD 77
++ VTGA GFI +++++RL + GH ++ D N++ + FH +
Sbjct: 1 MKYLVTGAAGFIGANVSKRLCAMGHEVVGID-NLNDYYDVALKLARLAPLEALSNFHFIK 59
Query: 78 LRVMDN----CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISG 133
L + D L +G V +LAA G+ + N +N + +LE R
Sbjct: 60 LDLADREGIAKLFAQQGFQRVIHLAAQ-AGVRYSLDNPLAYADSNLVGHLTILEGCRHHK 118
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
++ YASS+ +Y L + D+ P Y K A+E + Y+ + +
Sbjct: 119 IEHLVYASSSSVYG----LNQKMPFSTEDSVD-HPISLYAATKKANELMSHTYSHLYQLP 173
Query: 194 CRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVL 253
RF +YGP W + A F KA+ + + +++ G +R FT+ID+ VEG++
Sbjct: 174 TTGLRFFTVYGP---WGRPDMALFKFT-KAILAGETIDVYNHGDLSRDFTYIDDIVEGII 229
Query: 254 RL 255
R+
Sbjct: 230 RV 231
>MGI|MGI:1923605 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0016829 "lyase activity" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 MGI:MGI:1923605 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GeneTree:ENSGT00530000063128
GO:GO:0008460 eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:GFIASHM CTD:23483 HOVERGEN:HBG007741
OrthoDB:EOG4PVP08 EMBL:AK154341 EMBL:BC021419 IPI:IPI00405383
RefSeq:NP_083854.3 UniGene:Mm.251537 ProteinModelPortal:Q8VDR7
SMR:Q8VDR7 STRING:Q8VDR7 PhosphoSite:Q8VDR7 PRIDE:Q8VDR7
Ensembl:ENSMUST00000022727 GeneID:76355 KEGG:mmu:76355
InParanoid:Q3U4A6 NextBio:344957 Bgee:Q8VDR7 CleanEx:MM_TGDS
Genevestigator:Q8VDR7 GermOnline:ENSMUSG00000022130 Uniprot:Q8VDR7
Length = 355
Score = 182 (69.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 85/334 (25%), Positives = 148/334 (44%)
Query: 28 RISVTGAGGFIASHIARRLKSE-GHYIIAS----DW---KKNEHMTEDMFCHEF---HLV 76
R+ VTG GFIASH+ L + Y+I + D+ KN + ++F +
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPDYMIVNLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
D + +V K +D V + AA + F+++ Y N + ++ A+ +GV+
Sbjct: 79 DSHFVKLLFEVEK-IDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVNAAYEAGVE 135
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+F Y S+ +Y E + ES P +P + Y K A+E + Y + +
Sbjct: 136 KFIYVSTDEVYGGSLDQEFD----ESS--PKQPTNPYASSKAAAECFVQSYWERYKFPVV 189
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR- 254
+ R N+YGP + EK F L K + G GLQ R+F + + VE L
Sbjct: 190 ITRSSNVYGPH---QYPEKVIPKFI-SLLQHNRKCCIHGSGLQRRNFLYAADVVEAFLTV 245
Query: 255 LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSDNT---LI 310
LTK + E NIG++ +S+ ++A E++ ++ + V R ++ +
Sbjct: 246 LTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESETESWVDYVSDRPHNDMRYPMK 305
Query: 311 KEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 341
EK LGW P + ++G++ T W ++ K
Sbjct: 306 SEKIHSLGWKPKVPWEEGIKKTVEWYRKNFHNWK 339
>DICTYBASE|DDB_G0279465 [details] [associations]
symbol:tgds "putative dTDP-D-glucose 4,6-dehydratase"
species:44689 "Dictyostelium discoideum" [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0009225 "nucleotide-sugar metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016829 "lyase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 dictyBase:DDB_G0279465 GO:GO:0000166
Gene3D:3.40.50.720 GenomeReviews:CM000152_GR GO:GO:0050662
GO:GO:0009225 EMBL:AAFI02000031 GO:GO:0008460 eggNOG:COG1088
HSSP:P27830 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
RefSeq:XP_641641.1 ProteinModelPortal:Q54WS6 STRING:Q54WS6
EnsemblProtists:DDB0231748 GeneID:8622047 KEGG:ddi:DDB_G0279465
ProtClustDB:CLSZ2430684 Uniprot:Q54WS6
Length = 434
Score = 172 (65.6 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 71/274 (25%), Positives = 128/274 (46%)
Query: 28 RISVTGAGGFIASHIA----RRLKSEGHYIIAS-DWKKNEH-----MTEDMF-CHEFHLV 76
+I +TG GFI SH+A ++ K+ ++ D+ N + + E F ++ +++
Sbjct: 11 KILITGGAGFIGSHLAIYLTKKFKNSKIIVLDKLDYCSNINNLGCVLKELNFKFYKGNIL 70
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
D +++N + K +D V +LAA F QS NN + + +LE + +K
Sbjct: 71 DSELLENIFEKEK-IDIVIHLAAYTHVDNSFKQSIK--FTENNILGTHYLLETCKNYKLK 127
Query: 136 RFFYASSACIYPEF---KQLETNVSLKESDAWPA--EPQDAYGLEKLASEELCKHYTKDF 190
+F Y S+ +Y + N S+ +S + P + Y K +E L + Y K F
Sbjct: 128 KFIYVSTDEVYGSGLIEDNDDNNNSINQSSNEKSILNPTNPYSASKAGAEHLVQSYYKSF 187
Query: 191 GIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVE 250
+ + R +NIYGP + EK F L + K + G G TR++ +ID+ V
Sbjct: 188 KLPVIITRANNIYGPK---QYPEKIIPKFIN-LLLNNKKCTIHGTGKNTRNYLYIDDIVS 243
Query: 251 GV-LRLTKSDFREPVNIGSDEMVSMNEMAEIVLS 283
+ L K + NIG+D +S ++A+ +++
Sbjct: 244 AFDIILRKGEIGNVYNIGTDFEISNLDVAKKIIN 277
Score = 53 (23.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 314 LGWAPSMKLKDGLRITYFWIK 334
LGW S+ ++G+ T+ W K
Sbjct: 343 LGWKKSISWEEGIEKTFIWYK 363
>UNIPROTKB|A6QLW2 [details] [associations]
symbol:TGDS "dTDP-D-glucose 4,6-dehydratase" species:9913
"Bos taurus" [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
EMBL:BC148106 IPI:IPI00704940 RefSeq:NP_001094629.1
UniGene:Bt.41863 ProteinModelPortal:A6QLW2 STRING:A6QLW2
Ensembl:ENSBTAT00000006984 GeneID:534594 KEGG:bta:534594 CTD:23483
HOVERGEN:HBG007741 InParanoid:A6QLW2 OrthoDB:EOG4PVP08
NextBio:20876459 Uniprot:A6QLW2
Length = 355
Score = 181 (68.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 86/334 (25%), Positives = 150/334 (44%)
Query: 28 RISVTGAGGFIASH-IARRLKSEGHYIIAS----DW---KKNEHMTEDMFCHEFHLVDLR 79
R+ VTG GFIASH I ++ +Y+I + D+ KN + ++F D+
Sbjct: 19 RVLVTGGAGFIASHMIVSLVEDYPNYMIINLDKLDYCASLKNLETISNKQNYKFIQGDI- 77
Query: 80 VMDNCLKV---TKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
+ +K+ T+ +D V + AA + F+++ Y N + ++ A+ + V+
Sbjct: 78 CDSHFVKLLFETEKIDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVSAAHEARVE 135
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+F Y S+ +Y E + ES P +P + Y K A+E + Y + +
Sbjct: 136 KFIYVSTDEVYGGSLDKEFD----ESS--PKQPTNPYASSKAAAECFVQSYWEQYKFPVV 189
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR- 254
+ R N+YGP + EK F L K + G GLQTR+F + + VE L
Sbjct: 190 ITRSSNVYGPH---QYPEKVIPKFI-SLLQHNRKCCIHGTGLQTRNFLYATDVVEAFLTV 245
Query: 255 LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSDNT---LI 310
L K E NIG++ +S+ ++A E++ ++ + V R +++ +
Sbjct: 246 LKKGKPGEIYNIGTNFEMSVLQLAKELIQLIKETNSESEMENWVDYVDDRPTNDMRYPMK 305
Query: 311 KEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 341
EK LGW P + K+G++ T W +E K
Sbjct: 306 SEKIHGLGWRPKVPWKEGIKKTIEWYRENFHNWK 339
>TIGR_CMR|BA_5505 [details] [associations]
symbol:BA_5505 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0046872 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0044237 HOGENOM:HOG000168001
OMA:SHPNGYN GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:NP_847665.1 RefSeq:YP_022172.1 RefSeq:YP_031353.1 PDB:2C20
PDBsum:2C20 ProteinModelPortal:Q81K34 SMR:Q81K34 DNASU:1085150
EnsemblBacteria:EBBACT00000011015 EnsemblBacteria:EBBACT00000018769
EnsemblBacteria:EBBACT00000021224 GeneID:1085150 GeneID:2819098
GeneID:2850681 KEGG:ban:BA_5505 KEGG:bar:GBAA_5505 KEGG:bat:BAS5114
ProtClustDB:CLSK917664 BioCyc:BANT260799:GJAJ-5189-MONOMER
BioCyc:BANT261594:GJ7F-5367-MONOMER EvolutionaryTrace:Q81K34
Uniprot:Q81K34
Length = 330
Score = 180 (68.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 79/332 (23%), Positives = 144/332 (43%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH--EFHLVDLRVMDNCLK 86
I + G G+I SH ++L EG ++ D + H ED +F+ DLR
Sbjct: 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGH--EDAITEGAKFYNGDLRDKAFLRD 61
Query: 87 V--TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI-SFNMLEASRISGVKRFFYASSA 143
V + ++ V + AAD + + + YNN + + +LE V +F ++S+A
Sbjct: 62 VFTQENIEAVMHFAAD--SLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTA 119
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
Y E ++ ++ +E+ P + YG KLA E++ Y++ + ++ R+ N+
Sbjct: 120 ATYGE---VDVDLITEET---MTNPTNTYGETKLAIEKMLHWYSQASNLRYKIFRYFNVA 173
Query: 204 G--PFGTWKGMEKAPAAFC-----RKALTSTDKFEMWGDGLQT------RSFTFIDECVE 250
G P G G + P + AL +K M+GD T R + +++ V
Sbjct: 174 GATPNGII-GEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVA 232
Query: 251 ----GVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRN-S 305
G+ L + N+G+ S+ E+ + V + ++P P G R +
Sbjct: 233 AHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPRRAGDPARLVA 292
Query: 306 DNTLIKEKLGWAPS-MKLKDGLRITYFWIKEQ 336
+ KEKLGW P + +K + + W ++Q
Sbjct: 293 SSQKAKEKLGWDPRYVNVKTIIEHAWNWHQKQ 324
>UNIPROTKB|Q8ECF3 [details] [associations]
symbol:wbpP "UDP-GlkcNAc C4 epimerase WbpP" species:211586
"Shewanella oneidensis MR-1" [GO:0000271 "polysaccharide
biosynthetic process" evidence=ISS] [GO:0003824 "catalytic
activity" evidence=ISS] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 179 (68.1 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 92/352 (26%), Positives = 156/352 (44%)
Query: 13 YEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKNEHMTED 67
YE++++E S K + +TG GFI S++ +L +I D + N +
Sbjct: 4 YEQIKQE-LLNSPKTWL-ITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQS 61
Query: 68 MFCHE----FHLV--DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI 121
+ E F + D+R C V GVD+V + AA +G + +S I N I
Sbjct: 62 LVTSEQWMRFSFINGDIRDYAICEAVVNGVDYVLHQAA-LGSVP--RSIADPITTNAANI 118
Query: 122 S--FNMLEASRISGVKRFFYASSACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEK 176
+ NML+A++ + VK F YA+S+ Y P ++E N+ P Y + K
Sbjct: 119 TGFLNMLQAAKEAEVKSFTYAASSSTYGDHPALPKVEQNIG---------NPLSPYAVTK 169
Query: 177 LASEELCKHYTKDFGIECRVG-RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFE---M 232
+E Y + +G E +G R+ N+ FG + A AA K +S K E +
Sbjct: 170 YVNELYASVYARTYGFET-IGLRYFNV---FGRRQDPNGAYAAVIPKWTSSMIKGEDVFI 225
Query: 233 WGDGLQTRSFTFIDECVE-GVLRLTK-SDFREPV-NIGSDEMVSMNEMAEIVL-SFEDKK 288
GDG +R F +ID V+ +L T S+ + V N+ + ++N++ + S
Sbjct: 226 NGDGETSRDFCYIDNVVQMNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANG 285
Query: 289 LPIHHIPGPEGVRG---RNSDNTLIKE--KLGWAPSMKLKDGLRITYFWIKE 335
+ ++ P R R+S + K +LG+ + K+ +G+ W KE
Sbjct: 286 INVNQNPNYRDFRAGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKE 337
>TIGR_CMR|SO_3189 [details] [associations]
symbol:SO_3189 "polysaccharide biosynthesis protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0044237 GO:GO:0000271
HOGENOM:HOG000167994 HSSP:P32054 KO:K02473 GO:GO:0003974
RefSeq:NP_718745.1 ProteinModelPortal:Q8ECF3 SMR:Q8ECF3
GeneID:1170882 KEGG:son:SO_3189 PATRIC:23526060 OMA:NEVYNVA
ProtClustDB:CLSK2304490 Uniprot:Q8ECF3
Length = 340
Score = 179 (68.1 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 92/352 (26%), Positives = 156/352 (44%)
Query: 13 YEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASD-----WKKNEHMTED 67
YE++++E S K + +TG GFI S++ +L +I D + N +
Sbjct: 4 YEQIKQE-LLNSPKTWL-ITGVAGFIGSNLLEQLLKLNQTVIGLDNFATGRQHNLDEVQS 61
Query: 68 MFCHE----FHLV--DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI 121
+ E F + D+R C V GVD+V + AA +G + +S I N I
Sbjct: 62 LVTSEQWMRFSFINGDIRDYAICEAVVNGVDYVLHQAA-LGSVP--RSIADPITTNAANI 118
Query: 122 S--FNMLEASRISGVKRFFYASSACIY---PEFKQLETNVSLKESDAWPAEPQDAYGLEK 176
+ NML+A++ + VK F YA+S+ Y P ++E N+ P Y + K
Sbjct: 119 TGFLNMLQAAKEAEVKSFTYAASSSTYGDHPALPKVEQNIG---------NPLSPYAVTK 169
Query: 177 LASEELCKHYTKDFGIECRVG-RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFE---M 232
+E Y + +G E +G R+ N+ FG + A AA K +S K E +
Sbjct: 170 YVNELYASVYARTYGFET-IGLRYFNV---FGRRQDPNGAYAAVIPKWTSSMIKGEDVFI 225
Query: 233 WGDGLQTRSFTFIDECVE-GVLRLTK-SDFREPV-NIGSDEMVSMNEMAEIVL-SFEDKK 288
GDG +R F +ID V+ +L T S+ + V N+ + ++N++ + S
Sbjct: 226 NGDGETSRDFCYIDNVVQMNILAATAASEAKNEVYNVAVGDRTTLNDLYFAIKDSLNANG 285
Query: 289 LPIHHIPGPEGVRG---RNSDNTLIKE--KLGWAPSMKLKDGLRITYFWIKE 335
+ ++ P R R+S + K +LG+ + K+ +G+ W KE
Sbjct: 286 INVNQNPNYRDFRAGDVRHSQADVSKAVTRLGYQYTHKILEGISEAMPWYKE 337
>UNIPROTKB|Q47Y09 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 179 (68.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 77/328 (23%), Positives = 145/328 (44%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCH-------EFHLV--DLR 79
+TG GFI S++ L ++ D ++H +++ F+ V D+R
Sbjct: 20 ITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDIR 79
Query: 80 VMDNC---LKVTK-GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS--FNMLEASRISG 133
+++C L K GVD++ + AA +G + +S ++ N+ I+ ML A++ +
Sbjct: 80 QLEDCQTALSHYKSGVDYILHQAA-LGSVP--RSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
VK F YA+S+ Y + L K DA +P Y + K +E + K +G+
Sbjct: 137 VKSFVYAASSSTYGDHPALP-----KVEDAI-GKPLSPYAVTKYVNELYADVFHKTYGLN 190
Query: 194 CRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-V 252
C R+ N++G G A A+ + ++ + GDG +R F F++ V+ +
Sbjct: 191 CTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANI 250
Query: 253 LRLTKSDF--REPVNIGSDEMVSMNEM---AEIVLS---FEDKKLPIHHIPGPEGVRGRN 304
L T +D + N+ + S+N + ++ L + +K P + VR
Sbjct: 251 LAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVRHSQ 310
Query: 305 SDNTLIKEKLGWAPSMKLKDGLRITYFW 332
+D + K +G+ P K++ G+ W
Sbjct: 311 ADISKAKSLIGFEPEFKIQQGIDKAMPW 338
>TIGR_CMR|CPS_3643 [details] [associations]
symbol:CPS_3643 "NAD-dependent epimerase/dehydratase
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0044237
GO:GO:0000271 GO:GO:0016857 HOGENOM:HOG000167994 RefSeq:YP_270311.1
ProteinModelPortal:Q47Y09 SMR:Q47Y09 STRING:Q47Y09 GeneID:3519571
KEGG:cps:CPS_3643 PATRIC:21470213 KO:K02473 OMA:MIANEEL
BioCyc:CPSY167879:GI48-3665-MONOMER Uniprot:Q47Y09
Length = 344
Score = 179 (68.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 77/328 (23%), Positives = 145/328 (44%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCH-------EFHLV--DLR 79
+TG GFI S++ L ++ D ++H +++ F+ V D+R
Sbjct: 20 ITGCAGFIGSNLLETLLLLNQKVVGLDNFATGHQHNFDEVQTQVSAEQWQNFYFVKGDIR 79
Query: 80 VMDNC---LKVTK-GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMIS--FNMLEASRISG 133
+++C L K GVD++ + AA +G + +S ++ N+ I+ ML A++ +
Sbjct: 80 QLEDCQTALSHYKSGVDYILHQAA-LGSVP--RSIADPLLTNSANITGFLTMLTAAKETQ 136
Query: 134 VKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
VK F YA+S+ Y + L K DA +P Y + K +E + K +G+
Sbjct: 137 VKSFVYAASSSTYGDHPALP-----KVEDAI-GKPLSPYAVTKYVNELYADVFHKTYGLN 190
Query: 194 CRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-V 252
C R+ N++G G A A+ + ++ + GDG +R F F++ V+ +
Sbjct: 191 CTGLRYFNVFGKRQDPDGAYAAVIPKWTVAMIANEELLINGDGETSRDFCFVENAVQANI 250
Query: 253 LRLTKSDF--REPVNIGSDEMVSMNEM---AEIVLS---FEDKKLPIHHIPGPEGVRGRN 304
L T +D + N+ + S+N + ++ L + +K P + VR
Sbjct: 251 LAATANDAGKNQVYNVALGDRTSLNTLFNSLKVALQANGVDYQKSPTYQDFRAGDVRHSQ 310
Query: 305 SDNTLIKEKLGWAPSMKLKDGLRITYFW 332
+D + K +G+ P K++ G+ W
Sbjct: 311 ADISKAKSLIGFEPEFKIQQGIDKAMPW 338
>TIGR_CMR|CBU_0688 [details] [associations]
symbol:CBU_0688 "GDP-fucose synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009242 "colanic acid biosynthetic
process" evidence=ISS] [GO:0016491 "oxidoreductase activity"
evidence=ISS] [GO:0016857 "racemase and epimerase activity, acting
on carbohydrates and derivatives" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GenomeReviews:AE016828_GR
GO:GO:0044237 HOGENOM:HOG000168011 HSSP:P32055 EMBL:AF387640
ProteinModelPortal:Q93N55 PATRIC:17930059 ProtClustDB:CLSK914241
BioCyc:CBUR227377:GJ7S-686-MONOMER Uniprot:Q93N55
Length = 332
Score = 178 (67.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 87/325 (26%), Positives = 138/325 (42%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT 88
I VTG G S I RRLK +G+ + + + +T EF +NC
Sbjct: 7 IFVTGHRGLAGSAILRRLKKQGYSSLITRTHQELDLTNKEKVFEFFA------NNC---- 56
Query: 89 KGVDHVFNLAADMGGMGFIQSN-HSV-IMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
++VF AA +GG+ SN H V + +N I +N++EAS VKR + S+CIY
Sbjct: 57 --PEYVFLAAARVGGIN--DSNLHPVDFIRDNLAIQWNVIEASFRYKVKRLLFLGSSCIY 112
Query: 147 PEFKQLETNVSLKES--DAWPAEPQD-AYGLEKLASEELCKHYTKDFGIECRVGRFHNIY 203
+ LKE ++ EP + AY K+A E C Y + + + N++
Sbjct: 113 SN----DAPRPLKEIYFNSGKLEPTNRAYSTAKIAGIEHCWAYNRQYKTQYLCAMPTNLF 168
Query: 204 GPFGTWKGMEKAP--AAFCRKALTSTDK----FEMWGDGLQTRSFTFIDECVEGVLRL-- 255
GP + +E A+ K + ++ F +WG G R F + D+ E L
Sbjct: 169 GPNDNYD-LENGHVVASLISKIHQAKEQKKPNFVLWGSGKAKREFLYSDDLAEACCHLMN 227
Query: 256 -----TKSDFRE----P-VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS 305
KS F + P VNIGS + +S+ E+A ++ + I
Sbjct: 228 LPDDIVKSVFGQDDQPPIVNIGSGKEISIYELALLIQDIIGYQGDIIWDHSKPDGALTKV 287
Query: 306 DNTLIKEKLGWAPSMKLKDGLRITY 330
+ + + LGW+ L G++ TY
Sbjct: 288 MDVSLMQYLGWSAREGLVSGIKKTY 312
>UNIPROTKB|F1P029 [details] [associations]
symbol:TGDS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GeneTree:ENSGT00530000063128 GO:GO:0008460 PANTHER:PTHR10366:SF41
OMA:GFIASHM EMBL:AADN02029320 IPI:IPI00594682
Ensembl:ENSGALT00000027315 Uniprot:F1P029
Length = 365
Score = 174 (66.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 87/340 (25%), Positives = 151/340 (44%)
Query: 23 PSEKLRISVTGAGGFIASHIARRL-KSEGHYIIAS----DW---KKNEHMTEDMFCHEFH 74
P + R+ VTG GFIASH+ L ++ +Y+I + D+ KN + ++F
Sbjct: 19 PRFEKRLLVTGGAGFIASHVVVSLVRNYPNYLIINLDKLDYCASLKNLETVSEKENYKFI 78
Query: 75 LVDLRVMDNCLKV---TKGVDHVFNLAADMG-GMGFIQSNHSV-IMYNNTMISFNMLEAS 129
D+ + +K T+ +D V + AA + F H++ Y N + ++ A+
Sbjct: 79 QGDI-CEPHFIKQLFETEKIDIVLHFAAQTHVDLSFW---HALEFTYVNVYGTNVLVAAA 134
Query: 130 RISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD 189
+ V++F Y S+ +Y T+ ES P P + Y K A+E + Y +
Sbjct: 135 HEANVEKFVYVSTDEVYGG----STDQEFDESS--PKCPTNPYASSKAAAECFVQSYWER 188
Query: 190 FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249
+ + R N+YGP + EK F L K + G GLQ R+F + + V
Sbjct: 189 YQFPVVITRSSNVYGPH---QYPEKVIPKFI-SLLQQNRKCCIHGSGLQRRNFLYATDVV 244
Query: 250 EGVLRLTKSDFR-EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSDN 307
E L + K E NIG++ +S+ ++A+ ++ K + + V+ R +++
Sbjct: 245 EAFLTVLKEGKPGEIYNIGTNFEMSIVQLAKELIHLIKKTSSESEMEHWMDYVKDRPTND 304
Query: 308 T---LIKEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 341
+ EK LGW P + K+G++ T W KE K
Sbjct: 305 LRYPMSSEKMHNLGWRPKVPWKEGIKKTIEWYKENFHNWK 344
>TIGR_CMR|CJE_1287 [details] [associations]
symbol:CJE_1287 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:195099 "Campylobacter jejuni RM1221" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 GO:GO:0005975 GO:GO:0050661 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0097171 HOGENOM:HOG000167987
KO:K03274 GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
RefSeq:YP_179275.1 ProteinModelPortal:Q5HTW0 STRING:Q5HTW0
GeneID:3231794 KEGG:cjr:CJE1287 PATRIC:20044370 OMA:GSYQFHT
ProtClustDB:CLSK871664 BioCyc:CJEJ195099:GJC0-1313-MONOMER
Uniprot:Q5HTW0
Length = 317
Score = 172 (65.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 87/332 (26%), Positives = 140/332 (42%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEF-HLVDLRVMDNCL 85
+R+++TG GFI S +A L+ E H I+ D ++ E+ F H +L D L
Sbjct: 1 MRVAITGGAGFIGSQLALNLQ-EKHEILIIDKMRSSATFENGNLQSFGHFKNLLEFDGEL 59
Query: 86 --------KVTKGVDH-----VFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRI 131
KV K ++ +F+ AA F Q+ V+ N NT F +E S I
Sbjct: 60 FAGDINDEKVLKKIEDFKPEIIFHQAAISDTTVFDQTK--VLQTNLNTFKDF--IELS-I 114
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG 191
+ YASSA +Y + K +T V E EP++ Y KL ++L K Y
Sbjct: 115 DLNAKLIYASSASVYGDAKSPQT-VGKDE------EPKNPYAFSKLMMDKLAKKYYDKAH 167
Query: 192 IECRVG-RFHNIYGPFGTWKGMEKAPAA-FCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249
+ VG R+ N+YG +K + F + L + G R FT+I + +
Sbjct: 168 L---VGLRYFNVYGKGEFYKNKTASMVLQFGHQILAGKNPRLFEGSDQIYRDFTYIKDVI 224
Query: 250 EGVLRLTKSDFREPV-NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNT 308
L D + V N+GS + + ++ +I+ LP +IP P +
Sbjct: 225 NA--NLIALDSKCGVYNVGSGKARTFQDIVDILQKELKTDLPCEYIPNPYVKSYQFHTEA 282
Query: 309 LIKEKLGWAPSMKLKDGLRITYFWIKEQIEKE 340
+ + + P L++G++ IK EKE
Sbjct: 283 KLDQTWDYQPKFSLEEGIKDYLDEIKRLFEKE 314
>TAIR|locus:2118711 [details] [associations]
symbol:GAE1 "UDP-D-glucuronate 4-epimerase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] InterPro:IPR001509
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0016021 GO:GO:0005794 EMBL:CP002687 GenomeReviews:CT486007_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AL161577 EMBL:AY661562 EMBL:AY056303
EMBL:AY099855 EMBL:BT000308 EMBL:AY085505 IPI:IPI00530645
PIR:A85356 RefSeq:NP_194773.1 UniGene:At.20969 UniGene:At.67043
HSSP:P04397 ProteinModelPortal:Q9M0B6 SMR:Q9M0B6 STRING:Q9M0B6
PaxDb:Q9M0B6 PRIDE:Q9M0B6 EnsemblPlants:AT4G30440.1 GeneID:829167
KEGG:ath:AT4G30440 TAIR:At4g30440 HOGENOM:HOG000168000
InParanoid:Q9M0B6 KO:K08679 OMA:DELMSET PhylomeDB:Q9M0B6
ProtClustDB:CLSN2679288 Genevestigator:Q9M0B6 GO:GO:0050378
Uniprot:Q9M0B6
Length = 429
Score = 175 (66.7 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 82/338 (24%), Positives = 143/338 (42%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH------------MTEDMFCHEFH 74
+ + VTGA GF+ SH++ L+ G ++ D N + + +F E
Sbjct: 88 ISVLVTGATGFVGSHVSLALRKRGDGVVGLDNFNNYYDPSLKRARRSLLSSRGIFVVEGD 147
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGV 134
L D +++ V HV +LAA G+ + N +++N N+LE + +
Sbjct: 148 LNDAKLLAKLFDVV-AFTHVMHLAAQ-AGVRYALENPQSYVHSNIAGLVNLLEICKAANP 205
Query: 135 K-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+ +ASS+ +Y L V ESD +P Y K A EE+ Y +G+
Sbjct: 206 QPAIVWASSSSVYG----LNEKVPFSESDRTD-QPASLYAATKKAGEEITHTYNHIYGLA 260
Query: 194 CRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQ--TRSFTFIDECVEG 251
RF +YGP W + A +F R L G R FT+ID+ V+G
Sbjct: 261 ITGLRFFTVYGP---WGRPDMAYFSFTRNILQGKPITIYRGKNRVDLARDFTYIDDIVKG 317
Query: 252 VL-------RLTKSDFRE----PV---NIGSDEMVSMNEMAEIV---LSFEDKKLPIHHI 294
L + T S ++ P N+G+ V++ + +I+ L + K+ + +
Sbjct: 318 CLGSLDSSGKSTGSGGKKRGAAPYRIFNLGNTSPVTVPILVDILEKHLKVKAKRNFVE-M 376
Query: 295 PGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
PG V +++ + + + G+ P+ L+ GL+ W
Sbjct: 377 PGNGDVPFTHANISSARNEFGYKPTTDLETGLKKFVRW 414
>TIGR_CMR|GSU_1975 [details] [associations]
symbol:GSU_1975 "NAD-dependent epimerase/dehydratase
family protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016829 "lyase activity" evidence=ISS] [GO:0016857 "racemase
and epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE017180 GenomeReviews:AE017180_GR
HOGENOM:HOG000167994 GO:GO:0008460 PANTHER:PTHR10366:SF41
HSSP:P95780 ProtClustDB:CLSK864552 RefSeq:NP_953024.1
ProteinModelPortal:Q74BR6 GeneID:2685764 KEGG:gsu:GSU1975
PATRIC:22026813 OMA:AMKGCDV BioCyc:GSUL243231:GH27-1926-MONOMER
InterPro:IPR026390 TIGRFAMs:TIGR04180 Uniprot:Q74BR6
Length = 336
Score = 171 (65.3 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 75/308 (24%), Positives = 133/308 (43%)
Query: 28 RISVTGAGGFIASHIARRLKSEGH-------YIIASDWKKNEHMTEDMFCH-EFHLVDLR 79
+I VTGA GFI SH+ L G+ Y + W +H+ ++ + D+R
Sbjct: 7 KILVTGADGFIGSHLTEALLMRGYDTRAFVYYNSFNSWGWLDHLDPELLKSLDVFAGDIR 66
Query: 80 VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI--SFNMLEASRISGVKRF 137
+ KG D V +LAA + S HS Y +T + + N+++A+R GV +
Sbjct: 67 DPHGVREAMKGCDVVLHLAALIA---IPYSYHSPDTYVDTNVKGTLNVVQAARELGVAKV 123
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG 197
+ S++ +Y + V + E P + Q Y K+ ++++ + F +
Sbjct: 124 VHTSTSEVYGTARF----VPITEEH--PLQGQSPYSASKIGADQIAMSFYSSFDTPVAII 177
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
R N YGP + + P + + S + G TR ++ + V G + + +
Sbjct: 178 RPFNTYGPRQSARAF--IPTVITQ--IASGARTLRLGALHPTRDLNYVADTVAGFIAVAE 233
Query: 258 SD--FREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLG 315
S+ E +NIGS+ +SM E A ++ + I + E +R S+ E+L
Sbjct: 234 SEKSVGEVINIGSNFEISMGETARMIADVMGADVEI--VTDAERLRPDKSE----VERL- 286
Query: 316 WAPSMKLK 323
WA + K K
Sbjct: 287 WADTSKAK 294
>WB|WBGene00018737 [details] [associations]
symbol:F53B1.4 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0040017
GeneTree:ENSGT00530000063128 EMBL:FO081052 GO:GO:0008460
eggNOG:COG1088 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 OMA:AYNDARY HSSP:P26391 PIR:T16444
RefSeq:NP_508390.1 UniGene:Cel.908 ProteinModelPortal:Q20697
SMR:Q20697 STRING:Q20697 PaxDb:Q20697 EnsemblMetazoa:F53B1.4
GeneID:180525 KEGG:cel:CELE_F53B1.4 UCSC:F53B1.4 CTD:180525
WormBase:F53B1.4 InParanoid:Q20697 NextBio:909738 Uniprot:Q20697
Length = 342
Score = 171 (65.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 68/264 (25%), Positives = 116/264 (43%)
Query: 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFK 150
+ HV +D +G IQ N I+ T++ + S GVK+ + S+ +Y +
Sbjct: 93 ITHVDESYSDR--IGTIQDN---IISTTTLLE--SIVNSPYKGVKKLVHISTDEVYGD-- 143
Query: 151 QLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWK 210
E ES + P P + Y K A E + + Y + + + R +N+YGP
Sbjct: 144 SFEDTTPKSESASLP-NPTNPYAASKAACEMVIRSYWHSYKLPYVMVRMNNVYGPRQIHT 202
Query: 211 GMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLT-KSDFREPVNIGSD 269
K F + AL + + GDGL TRS+ ++++C E + R+ + E NIG+D
Sbjct: 203 ---KLIPKFTKLALDGKP-YPLMGDGLHTRSWMYVEDCSEAITRVALEGTLGEIYNIGTD 258
Query: 270 -EM--VSMNEMAEIVLSFEDKKLP----IHHIPG-PEGVRGRNSDNTLIKEKLGWAPSMK 321
EM + + +M +S + P IP P R D + I+ +GW +
Sbjct: 259 FEMTNIELTKMIHFTVSKLLNREPTAPTFAPIPDRPYHDRRYYIDFSKIRNAMGWQCTTP 318
Query: 322 LKDGLRITY-FWIKEQIEKEKTQG 344
+GL T +++K + + QG
Sbjct: 319 FSEGLMKTIDYYVKLHVATARLQG 342
>RGD|1306544 [details] [associations]
symbol:Tgds "TDP-glucose 4,6-dehydratase" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 RGD:1306544
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0008460 PANTHER:PTHR10366:SF41 OMA:GFIASHM IPI:IPI00373689
Ensembl:ENSRNOT00000012925 UCSC:RGD:1306544 Uniprot:F1M7R7
Length = 355
Score = 170 (64.9 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 83/334 (24%), Positives = 146/334 (43%)
Query: 28 RISVTGAGGFIASHIARRLKSE-GHYIIAS----DW---KKNEHMTEDMFCHEF---HLV 76
R+ VTG GFIASH+ L + +Y+I + D+ KN + ++F +
Sbjct: 19 RVLVTGGAGFIASHVIVSLVEDYPNYMIINLDKLDYCASLKNLEPVSNKQNYKFIQGDIC 78
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRISGVK 135
D + + K +D V + AA + F+++ Y N + ++ + + V+
Sbjct: 79 DSHFVKRLFESEK-IDIVLHFAAQTHVDLSFVRAFE--FTYVNVYGTHVLVNTAYEARVE 135
Query: 136 RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+F Y S+ +Y E + ES P +P + Y K A+E + Y + +
Sbjct: 136 KFIYVSTDEVYGGSLDQEFD----ESS--PKQPTNPYASSKAAAECFVQSYWERYKFPVV 189
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR- 254
+ R N+YGP + EK F L K + G GLQ R+F + + VE L
Sbjct: 190 ITRSSNVYGPH---QYPEKVIPKFI-SLLQHDRKCCIHGSGLQRRNFLYAADVVEAFLTV 245
Query: 255 LTKSDFREPVNIGSDEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNSDNT---LI 310
LTK + E NIG++ +S+ ++A E++ ++ + V R ++ +
Sbjct: 246 LTKGEPGEIYNIGTNFEMSVVQLAKELIQLIKETNSDSETERWVDYVSDRPHNDMRYPMK 305
Query: 311 KEK---LGWAPSMKLKDGLRITYFWIKEQIEKEK 341
EK LGW P + ++G++ T W +E K
Sbjct: 306 SEKIHSLGWKPKVPWEEGIKKTVEWYRENFHNWK 339
>TIGR_CMR|GSU_2240 [details] [associations]
symbol:GSU_2240 "UDP-glucose 4-epimerase" species:243231
"Geobacter sulfurreducens PCA" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:P09147 RefSeq:NP_953289.1 ProteinModelPortal:Q74AW0
GeneID:2687202 KEGG:gsu:GSU2240 PATRIC:22027335 OMA:VEHARQG
ProtClustDB:CLSK828777 BioCyc:GSUL243231:GH27-2212-MONOMER
Uniprot:Q74AW0
Length = 326
Score = 165 (63.1 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 82/318 (25%), Positives = 134/318 (42%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD----NC 84
+ VTG G+I SH+ R+L G+ ++ D D H LV + D +
Sbjct: 3 VLVTGGAGYIGSHVVRQLSEAGYTVVVYDNLSTGF--PDALVHGERLVTGDLSDTARLDA 60
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEASRISGVKRFFYASS 142
L V G V + AA + +S + + Y NNT + N+L A GV+RF ++S+
Sbjct: 61 LFVEYGFSTVLHFAASIIAP---ESVTAPLKYYGNNTRNTLNLLGACVKHGVERFIFSST 117
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
A +Y ++ V+ +ES P P YG KL SE + + G+ R+ N+
Sbjct: 118 AAVYGI---PDSGVAAEESATVPINP---YGTSKLMSEWMLRDVCAAHGMRSVALRYFNV 171
Query: 203 YGPFGTWKGMEKAPAAF------CRKALTSTDKFEMWG------DGLQTRSFTFIDECVE 250
G + ++ P A C+ AL DK ++G DG R + +++
Sbjct: 172 AGADPQARMGQRTPEATHLIKVSCQAALGLRDKVCIFGTDYPTPDGTGIRDYIHVEDLAS 231
Query: 251 GVLR----LTKSDFREPVNIGSDEMVSMNEMAEIV-----LSFEDKKLPIHHIPG-PEGV 300
L L K +N+G S+ E+ ++V + F ++ P PG P +
Sbjct: 232 AHLAALSYLEKGGESTRINVGYGSGSSVREVIDMVRRVSGVHFLAEEAPRR--PGDPPSL 289
Query: 301 RGRNSDNTLIKEKLGWAP 318
R +D + LGW P
Sbjct: 290 VAR-ADRA--RTLLGWTP 304
>ZFIN|ZDB-GENE-030131-5718 [details] [associations]
symbol:tgds "TDP-glucose 4,6-dehydratase"
species:7955 "Danio rerio" [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-030131-5718 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0008460 PANTHER:PTHR10366:SF41
HOVERGEN:HBG007741 HSSP:P26391 EMBL:BC066615 IPI:IPI00496965
UniGene:Dr.80538 ProteinModelPortal:Q6NYF5 Uniprot:Q6NYF5
Length = 347
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 80/332 (24%), Positives = 137/332 (41%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSE-GHY-IIASD---WKKN-EHMTEDMFCHEFHLVD 77
S++ + VTG GFI SH+ L H+ II D + N +++ + +
Sbjct: 4 SDRRTVLVTGGAGFIGSHLICALAGRFPHWRIINVDNLQYCSNLKNLRSVQASSSYSFIP 63
Query: 78 LRVMDNC----LKVTKGVDHVFNLAADMG-GMGFI-QSNHSVIMYNNTMISFNMLEASRI 131
V D L T+ +D VF+ AA+ F+ S + + T + ++ AS
Sbjct: 64 GDVCDPLFIKHLFSTEHIDVVFHCAAETHVENSFVCPSRFMRVNVDGTAV---LVRASLE 120
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG 191
+ V+RF Y S+ +Y + +V + P P + Y K A+E + Y
Sbjct: 121 ASVQRFIYISTDEVYGD------SVDQPFDELSPKRPTNPYSRSKAAAESIVTSYWLKHK 174
Query: 192 IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251
+ R N+YGP + EK F L K + G GLQ+R F ++ + +
Sbjct: 175 FPAVITRSSNVYGPR---QHHEKVIPRFL-SLLQQQQKCTIQGSGLQSRHFLYVSDVTDA 230
Query: 252 VLR-LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG-PEGVRGRNSD--- 306
L + K E NIG+ + + ++A ++ K + + E V R
Sbjct: 231 FLTVMEKGILGEIYNIGTGFEIPIIQLARELVQMTVKSVSAESLDDWLEFVEDRPVTELR 290
Query: 307 ---NTLIKEKLGWAPSMKLKDGLRITYFWIKE 335
N++ +LGW P + +G+R T W +E
Sbjct: 291 YPMNSVKLHRLGWRPKVAWTEGIRRTVQWYEE 322
>UNIPROTKB|B4E3U7 [details] [associations]
symbol:UXS1 "cDNA FLJ57788, highly similar to
UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0048040
"UDP-glucuronate decarboxylase activity" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AC018878 GO:GO:0048040 UniGene:Hs.469561 HGNC:HGNC:17729
EMBL:AK304872 IPI:IPI00910001 SMR:B4E3U7 STRING:B4E3U7
Ensembl:ENST00000428048 UCSC:uc010ywh.2 Uniprot:B4E3U7
Length = 185
Score = 144 (55.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 128 ASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELC 183
A R+ R AS++ +Y + V + D W P P+ Y K +E +C
Sbjct: 34 AKRVGA--RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMC 86
Query: 184 KHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243
Y K G+E RV R N +GP + + F +AL + ++G G QTR+F
Sbjct: 87 YAYMKQEGVEVRVARIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQ 144
Query: 244 FIDECVEGVLRLTKSDFREPVNIGS 268
++ + V G++ L S+ PVN+ S
Sbjct: 145 YVSDLVNGLVALMNSNVSSPVNLVS 169
>UNIPROTKB|C9JE50 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 GO:GO:0048040 HGNC:HGNC:17729
IPI:IPI00910001 ProteinModelPortal:C9JE50 SMR:C9JE50 STRING:C9JE50
PRIDE:C9JE50 Ensembl:ENST00000441952 ArrayExpress:C9JE50
Bgee:C9JE50 Uniprot:C9JE50
Length = 171
Score = 144 (55.7 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 42/145 (28%), Positives = 67/145 (46%)
Query: 128 ASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELC 183
A R+ R AS++ +Y + V + D W P P+ Y K +E +C
Sbjct: 34 AKRVGA--RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMC 86
Query: 184 KHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFT 243
Y K G+E RV R N +GP + + F +AL + ++G G QTR+F
Sbjct: 87 YAYMKQEGVEVRVARIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVYGSGSQTRAFQ 144
Query: 244 FIDECVEGVLRLTKSDFREPVNIGS 268
++ + V G++ L S+ PVN+ S
Sbjct: 145 YVSDLVNGLVALMNSNVSSPVNLVS 169
>TAIR|locus:2076066 [details] [associations]
symbol:GAE6 "UDP-D-glucuronate 4-epimerase 6"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA;ISS] [GO:0005794 "Golgi apparatus" evidence=ISM;IDA]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IEA] [GO:0044237 "cellular
metabolic process" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0050378 "UDP-glucuronate 4-epimerase activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006569 "tryptophan catabolic process" evidence=RCA]
[GO:0009684 "indoleacetic acid biosynthetic process" evidence=RCA]
[GO:0005768 "endosome" evidence=IDA] [GO:0005802 "trans-Golgi
network" evidence=IDA] InterPro:IPR001509 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040 GO:GO:0016021
GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005975 GO:GO:0005768 GO:GO:0032580 GO:GO:0044237
GO:GO:0005802 EMBL:AP001297 HSSP:P04397 HOGENOM:HOG000168000
KO:K08679 ProtClustDB:CLSN2679288 GO:GO:0050378 EMBL:AJ879893
EMBL:AF083691 EMBL:AF370210 EMBL:AY056117 EMBL:AY062625
EMBL:AY133771 IPI:IPI00538638 RefSeq:NP_189024.1 UniGene:At.24934
UniGene:At.67131 UniGene:At.71799 ProteinModelPortal:Q9LIS3
SMR:Q9LIS3 IntAct:Q9LIS3 STRING:Q9LIS3 PaxDb:Q9LIS3 PRIDE:Q9LIS3
EnsemblPlants:AT3G23820.1 GeneID:821965 KEGG:ath:AT3G23820
TAIR:At3g23820 InParanoid:Q9LIS3 OMA:NTAMPFS PhylomeDB:Q9LIS3
BRENDA:5.1.3.6 Genevestigator:Q9LIS3 Uniprot:Q9LIS3
Length = 460
Score = 163 (62.4 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 84/363 (23%), Positives = 145/363 (39%)
Query: 3 STEGTYGAYTYEELEREPYWPSEK--LRISVTGAGGFIASHIARRLKSEGHYIIA----S 56
S+ + G +E+ R+ L + VTGA GF+ SH + L+ G ++ +
Sbjct: 86 SSSSSIGGAAWEKRVRQSSTAKRPHGLSVLVTGAAGFVGSHCSLALRKRGDGVLGFDNFN 145
Query: 57 DW------KKNEHMTE--DMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQ 108
D+ + + + E +F E L D ++ V H+ +LAA G+ +
Sbjct: 146 DYYDPSLKRARQELLEKQQVFIVEGDLNDGPLLRKLFDVVP-FTHILHLAAQ-AGVRYAM 203
Query: 109 SNHSVIMYNNTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAE 167
N + +N N+LE ++ + + +ASS+ +Y L T E +
Sbjct: 204 KNPQSYIASNIAGFVNLLEVAKAANPQPAIVWASSSSVYG----LNTENPFSEEHRTD-Q 258
Query: 168 PQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKAL--T 225
P Y K A EE+ Y +G+ RF +YGP W + A F + L
Sbjct: 259 PASLYAATKKAGEEIAHTYNHIYGLSLTGLRFFTVYGP---WGRPDMAYFFFTKDILHGK 315
Query: 226 STDKFEMWGDGLQTRSFTFIDECVEGVL-------RLTKSDFREP-------VNIGSDEM 271
S D + + R FT+ID+ V+G + + T S ++ N+G+
Sbjct: 316 SIDIYRTQDNQEVARDFTYIDDIVKGCVGALDTAEKSTGSGGKKRGQAQLRVYNLGNTSP 375
Query: 272 VSMNEMAEIVLSFEDKKLPIHHIPGPEG--VRGRNSDNTLIKEKLGWAPSMKLKDGLRIT 329
V + + I+ K H I P V +++ +L + G+ P+ L GLR
Sbjct: 376 VPVGRLVSILEGLLGTKAKKHLIKMPRNGDVPYTHANVSLAYKDFGYKPTTDLAAGLRKF 435
Query: 330 YFW 332
W
Sbjct: 436 VKW 438
>UNIPROTKB|B0RVL0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:509169
"Xanthomonas campestris pv. campestris str. B100" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AM920689 GenomeReviews:AM920689_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:AF204145
RefSeq:YP_001905139.1 ProteinModelPortal:B0RVL0 SMR:B0RVL0
STRING:B0RVL0 GeneID:6324993 KEGG:xca:xccb100_3734 PATRIC:24087420
OMA:GFIASHM ProtClustDB:CLSK445958 Uniprot:B0RVL0
Length = 351
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 80/332 (24%), Positives = 135/332 (40%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHL-VDLRVMDNCLK 86
VTG GFI + S G ++ D + N + + + H+ V + D L
Sbjct: 6 VTGGAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGAL- 64
Query: 87 VTKGV-----DHVFNLAAD------MGGMG-FIQSN--HSVIMYNNTMISFNMLEASRIS 132
VT+ + D V N AA+ + G G FIQ+N ++ + + L +R
Sbjct: 65 VTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRD 124
Query: 133 GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI 192
RF + S+ +Y ET K ++ P P Y K AS+ L + + +G+
Sbjct: 125 AF-RFLHVSTDEVYGTLG--ETG---KFTETTPYAPNSPYSASKAASDHLVRAFHHTYGL 178
Query: 193 ECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 252
N YGP+ EK KAL + ++GDG Q R + F+ + E +
Sbjct: 179 PVLTTNCSNNYGPYHF---PEKLIPLVIAKALAG-EPLPVYGDGKQVRDWLFVSDHCEAI 234
Query: 253 LR-LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP----------IHHIPGPEGVR 301
L K E N+G + E+ + + + D+ P I ++ G
Sbjct: 235 RTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHD 294
Query: 302 GRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 332
R + D + +K++LGW P+ + G+ +T W
Sbjct: 295 RRYAIDASKLKDELGWEPAYTFEQGIALTVDW 326
>UNIPROTKB|A0QSK6 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:246196
"Mycobacterium smegmatis str. MC2 155" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IGI] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=IGI]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000480 EMBL:CP001663
GenomeReviews:CP000480_GR GO:GO:0045226 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:YP_006566244.1 RefSeq:YP_885894.1 ProteinModelPortal:A0QSK6
SMR:A0QSK6 STRING:A0QSK6 EnsemblBacteria:EBMYCT00000041385
GeneID:13429291 GeneID:4531259 KEGG:msg:MSMEI_1476
KEGG:msm:MSMEG_1512 PATRIC:18075481 OMA:AYNDARY
BioCyc:MSME246196:GJ4Y-1512-MONOMER Uniprot:A0QSK6
Length = 331
Score = 154 (59.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 73/319 (22%), Positives = 134/319 (42%)
Query: 27 LRISVTGAGGFIAS---HIARRLKSEGHYIIASDWKKNEHMTEDM--FCHEFHLVDLRVM 81
+R+ VTG GFI + H+A R ++ I D E + LV +
Sbjct: 1 MRLLVTGGAGFIGANFVHLALR-EARTSSITVLDALTYAGSRESLAPVADRIRLVQGDIT 59
Query: 82 DNCL--KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
D L + D V + AA+ + ++ +++N + ++ +LEA R V R +
Sbjct: 60 DAALVGDLVAESDAVVHFAAETHVDNAL-ADPEPFLHSNVVGTYTILEAVRRHNV-RLHH 117
Query: 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRF 199
S+ +Y + LE + + ++ P P Y K A++ L + + + +G+ +
Sbjct: 118 VSTDEVYGD---LELDNPARFNETTPYNPSSPYSSTKAAADLLVRAWVRSYGVRATISNC 174
Query: 200 HNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-LTKS 258
N YGP+ + +EK LT + +++G G R + +D+ V R LT
Sbjct: 175 SNNYGPY---QHVEKFIPRQITNVLTGR-RPKLYGAGANVRDWIHVDDHNSAVWRILTDG 230
Query: 259 DFREPVNIGSD-EMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS-DNTLIKEKLGW 316
IG++ E ++ M I+ H+ G R + D + ++++LGW
Sbjct: 231 TIGRTYLIGAECERNNLTVMRTILKLMGRDPDDFDHVTDRAGHDLRYAIDPSTLQDELGW 290
Query: 317 APS-MKLKDGLRITYFWIK 334
AP + GL T W +
Sbjct: 291 APKHTDFEAGLTDTIDWYR 309
>UNIPROTKB|Q9S642 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122587
"Neisseria meningitidis Z2491" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
OMA:RAYRQQM EMBL:AL157959 GenomeReviews:AL157959_GR GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
EMBL:AF083467 PIR:G82014 RefSeq:YP_002341735.1
RefSeq:YP_002341747.1 ProteinModelPortal:Q9S642 SMR:Q9S642
EnsemblBacteria:EBNEIT00000000158 EnsemblBacteria:EBNEIT00000001121
GeneID:906204 GeneID:906218 KEGG:nma:NMA0189 KEGG:nma:NMA0204
PATRIC:20360960 ProtClustDB:CLSK877380
BioCyc:NMEN122587:GI3Q-220-MONOMER
BioCyc:NMEN122587:GI3Q-233-MONOMER Uniprot:Q9S642
Length = 341
Score = 151 (58.2 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 83/337 (24%), Positives = 139/337 (41%)
Query: 28 RISVTGAGGFIASHIARRL-KSEGHYIIASD---WKKN-EHMTE--DMFCHEFHLVDL-- 78
+I VTG GFI S + R + ++ ++ D + N E +T+ D + F VD+
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTQDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDICD 62
Query: 79 RVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR-----ISG 133
R + + D V +LAA+ I S I N + +FN+LEA+R +
Sbjct: 63 RAELDRVFAQHRPDAVMHLAAESHVDRSIGSAGEFIQ-TNIVGTFNLLEAARAYRQQMPS 121
Query: 134 VK----RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKD 189
K RF + S+ +Y + + L A P P Y K +S+ L + + +
Sbjct: 122 EKHEAFRFHHISTDEVYGDLSGTD---DLFTETA-PYAPSSPYSASKASSDHLVRAWLRT 177
Query: 190 FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249
+G+ V N YGP+ EK AL ++GDG+Q R + F+++
Sbjct: 178 YGLPTIVTNCSNNYGPYHF---PEKLIPLMILNALDGKP-LPVYGDGMQIRDWLFVEDHA 233
Query: 250 EGVLRL-TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP------------IHHIPG 296
+ ++ T+ E NIG + E+ + + + ++ P I +
Sbjct: 234 RALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQD 293
Query: 297 PEGVRGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 332
G R + D I+ LGW P + GLR T W
Sbjct: 294 RPGHDARYAVDTAKIRRDLGWQPLETFESGLRKTVQW 330
>UNIPROTKB|P0C7J0 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:190485
"Xanthomonas campestris pv. campestris str. ATCC 33913" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE008922 GenomeReviews:AE008922_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM
ProtClustDB:CLSK445958 RefSeq:NP_636013.1 ProteinModelPortal:P0C7J0
SMR:P0C7J0 GeneID:1001158 KEGG:xcc:XCC0621 PATRIC:24071892
Uniprot:P0C7J0
Length = 351
Score = 151 (58.2 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 80/332 (24%), Positives = 134/332 (40%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASD---WKKNEHMTEDMFCHEFHL-VDLRVMDNCLK 86
VTG GFI + S G ++ D + N + + + H+ V + D L
Sbjct: 6 VTGRAGFIGGNFVLEAVSRGIRVVNLDALTYAGNLNTLASLEGNADHIFVKGDIGDGAL- 64
Query: 87 VTKGV-----DHVFNLAAD------MGGMG-FIQSN--HSVIMYNNTMISFNMLEASRIS 132
VT+ + D V N AA+ + G G FIQ+N ++ + + L +R
Sbjct: 65 VTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPDTRRD 124
Query: 133 GVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI 192
RF + S+ +Y ET K ++ P P Y K AS+ L + + +G+
Sbjct: 125 AF-RFLHVSTDEVYGTLG--ETG---KFTETTPYAPNSPYSASKAASDHLVRAFHHTYGL 178
Query: 193 ECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV 252
N YGP+ EK KAL + ++GDG Q R + F+ + E +
Sbjct: 179 PVLTTNCSNNYGPYHF---PEKLIPLVIAKALAG-EPLPVYGDGKQVRDWLFVSDHCEAI 234
Query: 253 LR-LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP----------IHHIPGPEGVR 301
L K E N+G + E+ + + + D+ P I ++ G
Sbjct: 235 RTVLAKGRVGETYNVGGNSERQNIEVVQAICALLDQHRPREDGKPRESQIAYVTDRPGHD 294
Query: 302 GRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 332
R + D + +K++LGW P+ + G+ T W
Sbjct: 295 RRYAIDASKLKDELGWEPAYTFEQGIAQTVDW 326
>UNIPROTKB|O06329 [details] [associations]
symbol:rmlB "dTDP-glucose 4,6-dehydratase" species:1773
"Mycobacterium tuberculosis" [GO:0005618 "cell wall" evidence=IDA]
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity"
evidence=IGI;IDA] [GO:0019305 "dTDP-rhamnose biosynthetic process"
evidence=IDA] [GO:0040007 "growth" evidence=IDA;IMP] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=IGI]
[GO:0070404 "NADH binding" evidence=ISS] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 UniPathway:UPA00124
InterPro:IPR016040 GO:GO:0040007 GO:GO:0005618 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
Gene3D:3.40.50.720 EMBL:BX842583 GO:GO:0070404 GO:GO:0045226
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41 OMA:AYNDARY
PIR:E70566 RefSeq:NP_217981.1 RefSeq:NP_338096.1
RefSeq:YP_006516953.1 HSSP:P95780 ProteinModelPortal:O06329
SMR:O06329 PRIDE:O06329 EnsemblBacteria:EBMYCT00000003518
EnsemblBacteria:EBMYCT00000071206 GeneID:13317071 GeneID:887332
GeneID:926625 KEGG:mtc:MT3570 KEGG:mtu:Rv3464 KEGG:mtv:RVBD_3464
PATRIC:18129579 TubercuList:Rv3464 ProtClustDB:CLSK792508
Uniprot:O06329
Length = 331
Score = 150 (57.9 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 72/320 (22%), Positives = 132/320 (41%)
Query: 27 LRISVTGAGGFIAS---HIARRLKSEGHYII--ASDWKKNEHMTEDMFCHEFHLVDLRVM 81
+R+ VTG GFI + H A R + + A + D+ LV +
Sbjct: 1 MRLLVTGGAGFIGTNFVHSAVREHPDDAVTVLDALTYAGRRESLADVE-DAIRLVQGDIT 59
Query: 82 DNCL--KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
D L ++ D V + AA+ + N ++ N + +F +LEA R GV R +
Sbjct: 60 DAELVSQLVAESDAVVHFAAE-SHVDNALDNPEPFLHTNVIGTFTILEAVRRHGV-RLHH 117
Query: 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRF 199
S+ +Y + +L+ ES P P Y K ++ L + + + +G+ +
Sbjct: 118 ISTDEVYGDL-ELDDRARFTEST--PYNPSSPYSATKAGADMLVRAWVRSYGVRATISNC 174
Query: 200 HNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLR-LTKS 258
N YGP+ + +EK LT + +++G G R + +D+ V R L +
Sbjct: 175 SNNYGPY---QHVEKFIPRQITNVLTGR-RPKLYGAGANVRDWIHVDDHNSAVRRILDRG 230
Query: 259 DFREPVNIGSD-EMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNS-DNTLIKEKLGW 316
I S+ E ++ + ++ + H+ G R + D + + ++L W
Sbjct: 231 RIGRTYLISSEGERDNLTVLRTLLRLMDRDPDDFDHVTDRVGHDLRYAIDPSTLYDELCW 290
Query: 317 APS-MKLKDGLRITYFWIKE 335
AP ++GLR T W ++
Sbjct: 291 APKHTDFEEGLRTTIDWYRD 310
>UNIPROTKB|P55294 [details] [associations]
symbol:rfbB1 "dTDP-glucose 4,6-dehydratase" species:122586
"Neisseria meningitidis MC58" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
EMBL:AE002098 GenomeReviews:AE002098_GR GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
ProtClustDB:CLSK877380 EMBL:L09188 PIR:G81242 PIR:S42431
RefSeq:NP_273127.1 RefSeq:NP_273142.1 ProteinModelPortal:P55294
SMR:P55294 EnsemblBacteria:EBNEIT00000009034
EnsemblBacteria:EBNEIT00000009474 GeneID:902170 GeneID:902183
KEGG:nme:NMB0063 KEGG:nme:NMB0079 PATRIC:20355131 OMA:ARSWWNT
BioCyc:NMEN122586:GHGG-64-MONOMER BioCyc:NMEN122586:GHGG-80-MONOMER
Uniprot:P55294
Length = 355
Score = 150 (57.9 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 90/340 (26%), Positives = 142/340 (41%)
Query: 28 RISVTGAGGFIASHIARRL-KSEGHYIIASD---WKKN-EHMTE--DMFCHEFHLVDL-- 78
+I VTG GFI S + R + ++ ++ D + N E +TE D + F VD+
Sbjct: 3 KILVTGGAGFIGSAVVRHIIRNTRDAVVNVDKLTYAGNLESLTEVADNPRYAFEQVDICD 62
Query: 79 RV-MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-- 135
R +D + D V +LAA+ I S I N + +FN+LEA+R +
Sbjct: 63 RAELDRVFAQYRP-DAVMHLAAESHVDRSIGSAGEFIQ-TNIVGTFNLLEAARAYWQQMP 120
Query: 136 -------RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK 188
RF + S+ +Y + + L A P P Y K +S+ L + + +
Sbjct: 121 SEQHEAFRFHHISTDEVYGDLGGTD---DLFTETA-PYAPSSPYSASKASSDHLVRAWLR 176
Query: 189 DFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248
+G+ V N YGP+ EK AL ++GDG+Q R + F+++
Sbjct: 177 TYGLPTIVTNCSNNYGPYHF---PEKLIPLMILNALDGKP-LPVYGDGMQIRDWLFVEDH 232
Query: 249 VEGVLRL-TKSDFREPVNIGSD------EMVS-----MNEMAEI----VLSFEDKKLPIH 292
+ ++ T+ E NIG E+V + E+A V +ED +
Sbjct: 233 ARALYQVVTEGVVGETYNIGGHNEKANIEVVKTICALLEELAPEKPAGVARYEDLITFVQ 292
Query: 293 HIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
PG + VR D I+ LGW P + GLR T W
Sbjct: 293 DRPGHD-VRYA-VDAAKIRRDLGWLPLETFESGLRKTVQW 330
>TIGR_CMR|BA_1230 [details] [associations]
symbol:BA_1230 "dTDP-glucose 4,6-dehydratase"
species:198094 "Bacillus anthracis str. Ames" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009243
"O antigen biosynthetic process" evidence=ISS] [GO:0019305
"dTDP-rhamnose biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0009225
GO:GO:0008460 TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006
KO:K01710 PANTHER:PTHR10366:SF41 OMA:GFIASHM RefSeq:NP_843702.1
RefSeq:YP_017844.1 RefSeq:YP_027409.1 PDB:4EGB PDBsum:4EGB
ProteinModelPortal:Q81TP0 SMR:Q81TP0 DNASU:1085406
EnsemblBacteria:EBBACT00000011863 EnsemblBacteria:EBBACT00000016310
EnsemblBacteria:EBBACT00000023983 GeneID:1085406 GeneID:2815086
GeneID:2848339 KEGG:ban:BA_1230 KEGG:bar:GBAA_1230 KEGG:bat:BAS1137
ProtClustDB:CLSK916141 BioCyc:BANT260799:GJAJ-1213-MONOMER
BioCyc:BANT261594:GJ7F-1267-MONOMER Uniprot:Q81TP0
Length = 322
Score = 143 (55.4 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 77/327 (23%), Positives = 140/327 (42%)
Query: 27 LRISVTGAGGFIASHIAR-RLKS-EGHYIIASD---WKKNEHMTEDMFCH-EFHLV--DL 78
+ I VTG GFI S+ L+S E + II D + N + + + H ++ V ++
Sbjct: 1 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEI 60
Query: 79 R---VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI-SFNMLEASRISGV 134
+ ++++ +K + V + N AA+ I++ + Y+ +I + +LE +
Sbjct: 61 QNGELLEHVIK-ERDVQVIVNFAAESHVDRSIEN--PIPFYDTNVIGTVTLLELVKKYPH 117
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIEC 194
+ S+ +Y + T +E+ P P Y K +++ + Y K + +
Sbjct: 118 IKLVQVSTDEVYGSLGK--TGRFTEET---PLAPNSPYSSSKASADMIALAYYKTYQLPV 172
Query: 195 RVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI-DECVEGVL 253
V R N YGP+ + EK AL K ++GDGL R + + D C +
Sbjct: 173 IVTRCSNNYGPY---QYPEKLIPLMVTNALEGK-KLPLYGDGLNVRDWLHVTDHCSAIDV 228
Query: 254 RLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDK-KLPIHHIPGPEGVRGRNSDNT-LIK 311
L K E NIG + + E+ E +++ K K I ++ G R + N +K
Sbjct: 229 VLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMK 288
Query: 312 EKLGWAPSMKLKDGLRITYFWIKEQIE 338
+ W P + GL+ T W ++ E
Sbjct: 289 NEFDWEPKYTFEQGLQETVQWYEKNEE 315
>UNIPROTKB|Q83DM2 [details] [associations]
symbol:CBU_0681 "NAD dependent epimerase/dehydratase
family" species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 128 (50.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 50/234 (21%), Positives = 103/234 (44%)
Query: 111 HSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170
++ ++Y N + + E + +++ Y SS +Y + Q T S+ P
Sbjct: 78 NAAMLYRNVRMMNVVCEVLQKQAIQQVIYISSDAVYADSDQPLTETSV-------TAPTS 130
Query: 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKF 230
+G+ LA E + + + I + R +YG G P F R+ + +
Sbjct: 131 LHGVMHLAREMMLQSVCSENNISLAILRPSLLYGAEDPHNGY--GPNRF-RRLADNHESI 187
Query: 231 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP 290
++G+G + R +ID+ E + R+ + R +NI + +++S ++AE V+ + ++
Sbjct: 188 ILFGEGEEQRDHVYIDDVAEIITRVIQRCSRGVLNIATGQVISFKQLAEKVVQLSNNEVA 247
Query: 291 IHHIP--GPEGVRG-RNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
I P G G R D T ++ ++DGL+ Y +K ++ K++
Sbjct: 248 IQPSPRQGSMPHNGYRPFDITDCQKAFPDFSYTSIEDGLQ--YSQLKMKVFKKE 299
Score = 53 (23.7 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 28 RISVTGAGGFIASHIARRLKSE 49
R+ V GA GF+ + +RLK E
Sbjct: 13 RVVVLGANGFVGRALCQRLKQE 34
>TIGR_CMR|CBU_0681 [details] [associations]
symbol:CBU_0681 "conserved hypothetical protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0044237 RefSeq:NP_819711.1
ProteinModelPortal:Q83DM2 GeneID:1208570 KEGG:cbu:CBU_0681
PATRIC:17930045 HOGENOM:HOG000026895 OMA:VSKISHR
ProtClustDB:CLSK914235 BioCyc:CBUR227377:GJ7S-679-MONOMER
Uniprot:Q83DM2
Length = 301
Score = 128 (50.1 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 50/234 (21%), Positives = 103/234 (44%)
Query: 111 HSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQD 170
++ ++Y N + + E + +++ Y SS +Y + Q T S+ P
Sbjct: 78 NAAMLYRNVRMMNVVCEVLQKQAIQQVIYISSDAVYADSDQPLTETSV-------TAPTS 130
Query: 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKF 230
+G+ LA E + + + I + R +YG G P F R+ + +
Sbjct: 131 LHGVMHLAREMMLQSVCSENNISLAILRPSLLYGAEDPHNGY--GPNRF-RRLADNHESI 187
Query: 231 EMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP 290
++G+G + R +ID+ E + R+ + R +NI + +++S ++AE V+ + ++
Sbjct: 188 ILFGEGEEQRDHVYIDDVAEIITRVIQRCSRGVLNIATGQVISFKQLAEKVVQLSNNEVA 247
Query: 291 IHHIP--GPEGVRG-RNSDNTLIKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
I P G G R D T ++ ++DGL+ Y +K ++ K++
Sbjct: 248 IQPSPRQGSMPHNGYRPFDITDCQKAFPDFSYTSIEDGLQ--YSQLKMKVFKKE 299
Score = 53 (23.7 bits), Expect = 4.5e-07, Sum P(2) = 4.5e-07
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 28 RISVTGAGGFIASHIARRLKSE 49
R+ V GA GF+ + +RLK E
Sbjct: 13 RVVVLGANGFVGRALCQRLKQE 34
>UNIPROTKB|Q888H1 [details] [associations]
symbol:udh "Uncharacterized protein" species:223283
"Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE016853 GenomeReviews:AE016853_GR HOGENOM:HOG000129432
OMA:GEDMASF ProtClustDB:CLSK908641 EMBL:EU377538 RefSeq:NP_790889.1
ProteinModelPortal:Q888H1 GeneID:1182687 KEGG:pst:PSPTO_1053
PATRIC:19993323 BioCyc:PSYR223283:GJIX-1075-MONOMER GO:GO:0050388
Uniprot:Q888H1
Length = 275
Score = 140 (54.3 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 49/167 (29%), Positives = 75/167 (44%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
R+ +TGA G + + L+ H + SD + D E + DL D ++
Sbjct: 13 RLLLTGAAGGLGKVLRETLRPYSHILRLSDIAEMAPAVGDH--EEVQVCDLADKDAVHRL 70
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
+GVD + + GG+ ++ I+ N F++ EA+R GVKR +ASS +
Sbjct: 71 VEGVDAILHF----GGVS-VERPFEEILGANICGVFHIYEAARRHGVKRVIFASSNHVIG 125
Query: 148 EFKQLETNVSLKESDAW-PAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+KQ ET DA P P YGL K E++ Y +GIE
Sbjct: 126 FYKQNET------IDAHSPRRPDSYYGLSKSYGEDMASFYFDRYGIE 166
>UNIPROTKB|Q48N10 [details] [associations]
symbol:PSPPH_0937 "Uncharacterized protein" species:264730
"Pseudomonas syringae pv. phaseolicola 1448A" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CP000058 GenomeReviews:CP000058_GR
RefSeq:YP_273211.1 ProteinModelPortal:Q48N10 STRING:Q48N10
GeneID:3557031 KEGG:psp:PSPPH_0937 PATRIC:19970959
HOGENOM:HOG000129432 OMA:GEDMASF ProtClustDB:CLSK908641
Uniprot:Q48N10
Length = 275
Score = 139 (54.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 47/167 (28%), Positives = 77/167 (46%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
R+ +TGA G + + + L+ + + SD + +D E + DL D ++
Sbjct: 13 RLLLTGAAGGLGKVLRKTLRPYANVLRLSDIAEMAPAVDDS--EEVQVCDLADKDAVYRL 70
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYP 147
+GVD + + GG+ ++ I+ N F++ EA+R GVKR +ASS +
Sbjct: 71 IEGVDAIVHF----GGVS-VERPFEEILGANICGVFHIYEAARRHGVKRVIFASSNHVIG 125
Query: 148 EFKQLETNVSLKESDAW-PAEPQDAYGLEKLASEELCKHYTKDFGIE 193
+KQ ET DA P P YGL K E++ Y +GI+
Sbjct: 126 FYKQTET------IDAHSPRRPDSYYGLSKSYGEDMASFYFDRYGIQ 166
>UNIPROTKB|P44914 [details] [associations]
symbol:rffG "dTDP-glucose 4,6-dehydratase" species:71421
"Haemophilus influenzae Rd KW20" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS] [GO:0045226
"extracellular polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:L42023
GenomeReviews:L42023_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
KO:K01710 PANTHER:PTHR10366:SF41 PIR:C64099 RefSeq:NP_439034.2
ProteinModelPortal:P44914 SMR:P44914 GeneID:949510 KEGG:hin:HI0873
PATRIC:20190401 OMA:AKKAFRF ProtClustDB:CLSK824762 Uniprot:P44914
Length = 338
Score = 141 (54.7 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 73/284 (25%), Positives = 124/284 (43%)
Query: 75 LVDLRVMDNCLKVTKGVDHVFNLAADM-------GGMGFIQSNHSVIMYNNTMISFNM-- 125
+ DL V++N + + D V +LAA+ G F+Q+N V Y ++ N
Sbjct: 60 ICDLNVIENIFEKYQP-DAVMHLAAESHVDRSISGAADFVQTN-IVGTYTLLEVAKNYWH 117
Query: 126 -LEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
L+ ++ + RF + S+ +Y + E + ++S P P Y K AS L +
Sbjct: 118 TLDEAKKTTF-RFHHISTDEVYGDLSLSEPAFT-EQS---PYHPSSPYSASKAASNHLVQ 172
Query: 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244
+ + +G+ + N YG + + EK A+ ++GDG Q R + F
Sbjct: 173 AWHRTYGLPVIITNSSNNYGAY---QHAEKLIPLMISNAVMGKP-LPIYGDGQQIRDWLF 228
Query: 245 IDECVEG-VLRLTKSDFREPVNIGSD------EMVS-----MNEMAEI----VLSFEDKK 288
+++ V+ L LTK E NIG + E+V + E+A + +ED
Sbjct: 229 VEDHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEELAPSKPNHIKYYEDLM 288
Query: 289 LPIHHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
+ PG + VR + D + I +LGW P + + GLR T W
Sbjct: 289 TFVKDRPGHD-VR-YSLDCSKIHAELGWQPQITFEQGLRQTVKW 330
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 65/282 (23%), Positives = 120/282 (42%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGH-YIIASD---WKKNEHMTEDM-----FCHE-FHLV 76
+ I VTG GFI S + R + + ++I D + N+ ++ + E +
Sbjct: 2 MNILVTGGSGFIGSALIRYIINHTQDFVINIDKLTYAANQSALREVENNPRYVFEKVDIC 61
Query: 77 DLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKR 136
DL V++N + + D V +LAA+ I S + + N + ++ +LE + K
Sbjct: 62 DLNVIENIFEKYQP-DAVMHLAAESHVDRSI-SGAADFVQTNIVGTYTLLEVA-----KN 114
Query: 137 FFYASSACIYPEFK--QLETN-----VSLKE---SDAWPAEPQDAYGLEKLASEELCKHY 186
+++ F+ + T+ +SL E ++ P P Y K AS L + +
Sbjct: 115 YWHTLDEAKKTTFRFHHISTDEVYGDLSLSEPAFTEQSPYHPSSPYSASKAASNHLVQAW 174
Query: 187 TKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246
+ +G+ + N YG + + EK A+ ++GDG Q R + F++
Sbjct: 175 HRTYGLPVIITNSSNNYGAY---QHAEKLIPLMISNAVMGKP-LPIYGDGQQIRDWLFVE 230
Query: 247 ECVEG-VLRLTKSDFREPVNIGSD-EMVSMNEMAEIVLSFED 286
+ V+ L LTK E NIG + E ++ + I E+
Sbjct: 231 DHVQASYLVLTKGRVGENYNIGGNCEKTNLEVVKRICQLLEE 272
>UNIPROTKB|C9JW33 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0048040 "UDP-glucuronate decarboxylase activity"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001509
InterPro:IPR021761 Pfam:PF01370 Pfam:PF11803 InterPro:IPR016040
GO:GO:0005739 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004 GO:GO:0048040
HGNC:HGNC:17729 IPI:IPI00916527 ProteinModelPortal:C9JW33
SMR:C9JW33 STRING:C9JW33 Ensembl:ENST00000457835
ArrayExpress:C9JW33 Bgee:C9JW33 Uniprot:C9JW33
Length = 190
Score = 131 (51.2 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASD--WKKNEHMTEDMFCHE-FHLVDLRVM 81
++ RI +TG GF+ SH+ +L +GH + D + + E HE F L++ V+
Sbjct: 30 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 89
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ L + VD +++LA+ ++ N + NT+ + NML ++ G R AS
Sbjct: 90 EP-LYIE--VDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGA-RLLLAS 144
Query: 142 SACIYPEFKQLETNVSLKESDAW----PAEPQDAYGLEKLASEELCKHYTK 188
++ +Y + V + D W P P+ Y K +E +C Y K
Sbjct: 145 TSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMK 190
>UNIPROTKB|C9JCB7 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HOGENOM:HOG000168004
HGNC:HGNC:17729 IPI:IPI00916638 ProteinModelPortal:C9JCB7
SMR:C9JCB7 STRING:C9JCB7 PRIDE:C9JCB7 Ensembl:ENST00000416298
ArrayExpress:C9JCB7 Bgee:C9JCB7 Uniprot:C9JCB7
Length = 134
Score = 121 (47.7 bits), Expect = 7.0e-07, P = 7.0e-07
Identities = 38/132 (28%), Positives = 61/132 (46%)
Query: 118 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYG 173
NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y
Sbjct: 11 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYD 64
Query: 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW 233
K +E +C Y K G+E RV R N +GP + + F +AL + ++
Sbjct: 65 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGP-RMHMNDGRVVSNFILQALQG-EPLTVY 122
Query: 234 GDGLQTRSFTFI 245
G G QTR+F ++
Sbjct: 123 GSGSQTRAFQYV 134
>TIGR_CMR|SO_3167 [details] [associations]
symbol:SO_3167 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
TIGRFAMs:TIGR01181 HSSP:P27830 HOGENOM:HOG000168006 KO:K01710
PANTHER:PTHR10366:SF41 RefSeq:NP_718723.1 ProteinModelPortal:Q8ECH5
SMR:Q8ECH5 GeneID:1170861 KEGG:son:SO_3167 PATRIC:23526018
OMA:IDLIIHK ProtClustDB:CLSK907039 Uniprot:Q8ECH5
Length = 343
Score = 140 (54.3 bits), Expect = 9.1e-07, P = 9.1e-07
Identities = 80/344 (23%), Positives = 139/344 (40%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIAS-D---WKKNEHMTEDMFCHE-FHLVDLRVM 81
+RI VTG GFI S + R L + ++ + D + + + +E +H V +
Sbjct: 1 MRILVTGGAGFIGSALVRMLIEQTESVVLNFDKLTYASHPESLAGVADNERYHFVQADIC 60
Query: 82 DNCL--KVTKGV--DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI------ 131
D +V + D + +LAA+ I I N + ++ +LEA R
Sbjct: 61 DRARLEQVLQQFQPDLMMHLAAESHVDRSIDGPAEFIQ-TNIVGTYTLLEACRSYYQTLG 119
Query: 132 SGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFG 191
+R F F L E+ A+ +P Y K +++ L + + + +
Sbjct: 120 QAQQRRFRLHHISTDEVFGSLTETGLFSETSAY--DPSSPYSASKASADHLVRAWHRTYA 177
Query: 192 IECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251
+ + N YGPF + EK AL S ++G+G Q R + ++D+ V+
Sbjct: 178 LPIVITNCSNNYGPF---QYPEKLIPLMVSNALQSKP-LPIYGNGQQVRDWLYVDDHVKA 233
Query: 252 V-LRLTKSDFREPVNIG-SDEMVSMNEMAEIVLSFEDKKLPIH----------------H 293
+ L T+ + NIG S E ++ + I S ++ +P H +
Sbjct: 234 LYLVATQGQLGQTYNIGGSCEQTNLTVVRHIC-SLLEELVPTHPQSLAMGNAGFADLIQY 292
Query: 294 IPGPEGVRGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFWIKEQ 336
+ G R + D + I+ +LGW P + GLR T WI Q
Sbjct: 293 VVDRPGHDVRYAIDASKIQRELGWRPQESFESGLRKTVEWIINQ 336
>DICTYBASE|DDB_G0281487 [details] [associations]
symbol:DDB_G0281487 "3-beta-hydroxysteroid
dehydrogenase" species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 dictyBase:DDB_G0281487 eggNOG:COG0451
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
EMBL:AAFI02000041 KO:K07748 RefSeq:XP_640712.1
ProteinModelPortal:Q54TU9 STRING:Q54TU9 PRIDE:Q54TU9
EnsemblProtists:DDB0233059 GeneID:8623099 KEGG:ddi:DDB_G0281487
InParanoid:Q54TU9 OMA:HIVWGPG ProtClustDB:CLSZ2729041
Uniprot:Q54TU9
Length = 349
Score = 131 (51.2 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 64/249 (25%), Positives = 111/249 (44%)
Query: 31 VTGAGGFIASHIARRLKSEGHYII-ASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTK 89
V G GF+ +I L + G + D +K+ +D FH+ D+R ++ K
Sbjct: 7 VVGGCGFLGRYIVESLLARGEKNVHVFDIRKS--FEDDRVT--FHIGDIRKTEDLESACK 62
Query: 90 GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEF 149
G+ VF+ A+ GMG+ +SV N + + ++EA GVK+ Y SS+ +
Sbjct: 63 GITTVFHTASPTHGMGY-DIYYSV----NVIGTERLIEACIKCGVKQLVYTSSSSVVFNG 117
Query: 150 KQLETNVSLKESDAWPAEPQDAYGLEK-LASEELCKHYTKDFGIECRVGRFHNIYGPFGT 208
K + V+ E+ + + D Y K L + K + + C + R I+GP
Sbjct: 118 KDI---VNGDETLPYVDKHIDPYNKTKELGERAVLKAKGSNL-LVCAL-RPAGIFGP--- 169
Query: 209 WKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-VLRLTKSDFREPVNIG 267
+ ++ P F + A +KF M+GDG +T+ID V +L P++ G
Sbjct: 170 -REVQGWPQ-FLKAAKEGKNKF-MFGDGNNLCDWTYIDNVVHAHILAADNMTTNSPIS-G 225
Query: 268 SDEMVSMNE 276
S ++ +E
Sbjct: 226 SVYFITNDE 234
Score = 49 (22.3 bits), Expect = 9.7e-07, Sum P(2) = 9.7e-07
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 311 KEKLGWAPSMKLKDGLRITYFWIKEQ 336
K++L + P + L+DG+ T W +Q
Sbjct: 307 KKELKYKPIVSLRDGMEKTKEWFLQQ 332
>CGD|CAL0000450 [details] [associations]
symbol:GAL102 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 71/318 (22%), Positives = 134/318 (42%)
Query: 28 RISVTGAGGFIASH-IARRLKS--EGHY--IIASDWKKNEHMTEDMFCHE-FHLVDLRVM 81
RI V+G GFI H + +K H+ I ++ N E++ F V L +
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLS 67
Query: 82 DNC---LKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKR 136
DN LK+TK + N AA+ F + NN + + N+LE R++ +
Sbjct: 68 DNLEYLLKITKNTTDIINFAAESSVDRSF--KDPVYFTKNNILATQNLLECHRLNPSIGY 125
Query: 137 FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRV 196
F + S+ +Y + + + KE+ P + Y K A + + K Y + + +
Sbjct: 126 FLHISTDEVYGDVYEGDN----KENAVM--NPTNPYSASKAAIDLIIKSYQYSYKLPITI 179
Query: 197 GRFHNIYGPFGTWKGMEKA-PAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV--- 252
R +N+YGP + EK P + + + G G R + ++ + V +
Sbjct: 180 LRPNNVYGPL---QYPEKIIPLTI--QCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETV 234
Query: 253 -LRLTKSDFREPVNIG-SDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLI 310
++ + + NIG +DE+ +++ + ++++ + I I S +T
Sbjct: 235 WIKNPMTTVNQIYNIGGTDELDNLS-LIKLIMEIFGRG-EIQFIKDRNYNDTNYSIDTTK 292
Query: 311 KEKLGWAPSMKLKDGLRI 328
LGW+P + L GL++
Sbjct: 293 IHNLGWSPKISLVQGLQL 310
>UNIPROTKB|Q59VY4 [details] [associations]
symbol:TGD99 "Putative uncharacterized protein TGD99"
species:237561 "Candida albicans SC5314" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=IDA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IC] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0035690
"cellular response to drug" evidence=IMP] InterPro:IPR001509
InterPro:IPR005888 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000450
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
GO:GO:0035690 GO:GO:0009272 EMBL:AACQ01000118 EMBL:AACQ01000119
GO:GO:0008460 eggNOG:COG1088 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:XP_713734.1 RefSeq:XP_713768.1 ProteinModelPortal:Q59VY4
STRING:Q59VY4 GeneID:3644585 GeneID:3644611 KEGG:cal:CaO19.11158
KEGG:cal:CaO19.3674 Uniprot:Q59VY4
Length = 320
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 71/318 (22%), Positives = 134/318 (42%)
Query: 28 RISVTGAGGFIASH-IARRLKS--EGHY--IIASDWKKNEHMTEDMFCHE-FHLVDLRVM 81
RI V+G GFI H + +K H+ I ++ N E++ F V L +
Sbjct: 8 RIVVSGGAGFIGIHFLCYMVKKYPNFHFTCIDKLNYASNATEIENLKSFSNFEFVHLDLS 67
Query: 82 DNC---LKVTKGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKR 136
DN LK+TK + N AA+ F + NN + + N+LE R++ +
Sbjct: 68 DNLEYLLKITKNTTDIINFAAESSVDRSF--KDPVYFTKNNILATQNLLECHRLNPSIGY 125
Query: 137 FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRV 196
F + S+ +Y + + + KE+ P + Y K A + + K Y + + +
Sbjct: 126 FLHISTDEVYGDVYEGDN----KENAVM--NPTNPYSASKAAIDLIIKSYQYSYKLPITI 179
Query: 197 GRFHNIYGPFGTWKGMEKA-PAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGV--- 252
R +N+YGP + EK P + + + G G R + ++ + V +
Sbjct: 180 LRPNNVYGPL---QYPEKIIPLTI--QCINEKKPIPVHGKGTNKRKYLYVLDIVLAIETV 234
Query: 253 -LRLTKSDFREPVNIG-SDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNTLI 310
++ + + NIG +DE+ +++ + ++++ + I I S +T
Sbjct: 235 WIKNPMTTVNQIYNIGGTDELDNLS-LIKLIMEIFGRG-EIQFIKDRNYNDTNYSIDTTK 292
Query: 311 KEKLGWAPSMKLKDGLRI 328
LGW+P + L GL++
Sbjct: 293 IHNLGWSPKISLVQGLQL 310
>TIGR_CMR|CBU_0676 [details] [associations]
symbol:CBU_0676 "NAD dependent epimerase/dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0000271
"polysaccharide biosynthetic process" evidence=ISS] [GO:0003824
"catalytic activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GenomeReviews:AE016828_GR GO:GO:0044237 EMBL:AF387640
ProteinModelPortal:Q93N67 PRIDE:Q93N67 PATRIC:17930035
HOGENOM:HOG000168002 ProtClustDB:CLSK905415
BioCyc:CBUR227377:GJ7S-674-MONOMER Uniprot:Q93N67
Length = 337
Score = 139 (54.0 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 79/315 (25%), Positives = 136/315 (43%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHE---FHLV--DLRVMD 82
RI VTG G++ S + +L G+ + D +D E ++V D+R +
Sbjct: 7 RILVTGGAGYVGSALVPQLLELGYRVTVYD---TLFFGDDFLPKENPYLNIVEGDIRDTE 63
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
+ K D V +LA F + + ++ N M++A++ +GVKRF YASS
Sbjct: 64 RLKQCFKDADAVISLACISNDASF-ELDETLSTSINLEAFEPMVKAAKAAGVKRFIYASS 122
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC-KHYTKDFGIECRVGRFHN 201
+ +Y ET +E P P Y K E L KH + +F C R
Sbjct: 123 SSVYGVS---ETKDVTEEH---PLVPLTLYNKYKGMCEPLLFKHQSPEF--VCVTIRPAT 174
Query: 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFI-DECVEGVLRLTKSDF 260
+ G + + ++ + A+ + +K ++G G Q R + D C L L D
Sbjct: 175 LCG-YAPRQRLDLSVNILTNHAVNN-NKITVFG-GSQLRPNLHVQDMCDLYKLLLVVPDE 231
Query: 261 R---EPVNIGSDEMVSMNEMAEIVLSFEDK----KLPIHHIPGP-EGVRGRNSDNTLIKE 312
+ E N+G + S+ E+A IV + ++ K PI + P + +R + ++ IK
Sbjct: 232 KIAGETFNVGYENK-SIMEIAHIVKNIVEEEFPEKAPIDIVTAPTDDIRSYHINSDKIKR 290
Query: 313 KLGWAPSMKLKDGLR 327
LG+ ++D +R
Sbjct: 291 CLGFEAKYSIEDAVR 305
>UNIPROTKB|Q9HTB6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:208964
"Pseudomonas aeruginosa PAO1" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 PseudoCAP:PA5454
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:AE004091 GenomeReviews:AE004091_GR GO:GO:0033705 EMBL:AF009955
PIR:H82964 RefSeq:NP_254141.1 HSSP:P27830 ProteinModelPortal:Q9HTB6
SMR:Q9HTB6 GeneID:883037 KEGG:pae:PA5454 PATRIC:19845791
HOGENOM:HOG000167992 OMA:NLLEACA ProtClustDB:CLSK869364
Uniprot:Q9HTB6
Length = 304
Score = 131 (51.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 62/233 (26%), Positives = 100/233 (42%)
Query: 118 NTMISFNMLEASRISGVK-RFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEK 176
N + + N+L+A + G F Y SS +Y + E + + E + P P++ Y + K
Sbjct: 80 NLLGTLNLLQALKARGFSGTFLYISSGDVYGQVA--EAALPIHE-ELIP-HPRNPYAVSK 135
Query: 177 LASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAA--FCR-KALTSTDKFEMW 233
LA+E LC + G V R N GP G A AA R K ++ E+
Sbjct: 136 LAAESLCLQWGITEGWRVLVARPFNHIGP-GQKDSFVIASAARQIARMKQGLQANRLEV- 193
Query: 234 GDGLQTRSFTFIDECVEGVLRLTKSDFREPV-NIGSDEMVSMNEMAEIVLSFEDKKLPIH 292
GD +R F + + + LRL V N+ S + + E+ E++ +L I
Sbjct: 194 GDIDVSRDFLDVQDVLSAYLRLLSHGEAGAVYNVCSGQEQKIRELIELLADIAQVELEIV 253
Query: 293 HIPG----PEGVRGRNSDNTLIKEKLGWAPSMKLKDGLR-ITYFWIKEQIEKE 340
P E R R S + + + GW P + +K LR I W + ++ +E
Sbjct: 254 QDPARMRRAEQRRVRGS-HARLHDTTGWKPEITIKQSLRAILSDW-ESRVREE 304
Score = 44 (20.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 28 RISVTGAGGFIASHI 42
R+ VTG GF+ H+
Sbjct: 4 RLFVTGLSGFVGKHL 18
>TAIR|locus:2057786 [details] [associations]
symbol:3BETAHSD/D2
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA;ISS] [GO:0016616 "oxidoreductase activity, acting on
the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0016020
"membrane" evidence=IDA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IGI;IDA]
[GO:0016126 "sterol biosynthetic process" evidence=RCA] [GO:0019745
"pentacyclic triterpenoid biosynthetic process" evidence=RCA]
UniPathway:UPA00770 InterPro:IPR002225 InterPro:IPR003388
Pfam:PF01073 Pfam:PF02453 PROSITE:PS50845 InterPro:IPR016040
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC004484
GO:GO:0047012 EMBL:DQ302749 EMBL:BX818951 EMBL:AK176177
IPI:IPI00540500 IPI:IPI00657508 IPI:IPI00929941 PIR:C84658
RefSeq:NP_001031422.1 RefSeq:NP_180194.2 UniGene:At.38921
ProteinModelPortal:Q67ZE1 SMR:Q67ZE1 PaxDb:Q67ZE1 PRIDE:Q67ZE1
EnsemblPlants:AT2G26260.1 GeneID:817166 KEGG:ath:AT2G26260
TAIR:At2g26260 InParanoid:Q67ZE1 OMA:DTLLWKD PhylomeDB:Q67ZE1
ProtClustDB:CLSN2716544 Genevestigator:Q67ZE1 Uniprot:Q67ZE1
Length = 564
Score = 120 (47.3 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 59/229 (25%), Positives = 93/229 (40%)
Query: 31 VTGAGGFIASHIAR----------RLKSEGHYIIASDWKKNEHMTEDMFCHEFHLV--DL 78
VTG GF A H+ R+ I+ + N + E + + DL
Sbjct: 14 VTGGRGFAARHLVEMLVRYEMFCVRIADLAPAIMLDPQEGNGVLDEGLRSGRVQYISADL 73
Query: 79 RVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138
R +K +G + VF++AA + Q +SV N + N+++A GVKR
Sbjct: 74 RDKSQVVKAFQGAEVVFHMAAPDSSINNHQLQYSV----NVQGTQNVIDACVDVGVKRLI 129
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI-ECRVG 197
Y SS + F + ++ ES A+P + D+Y K EEL G+ C +
Sbjct: 130 YTSSPSVV--FDGVHGILNGTESMAYPIKHNDSYSATKAEGEELIMKANGRNGLLTCCI- 186
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246
R +I+GP G + A KF + GDG FT+++
Sbjct: 187 RPSSIFGP-----GDRLLVPSLVAAARAGKSKFII-GDGNNLYDFTYVE 229
Score = 64 (27.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 303 RNSDNTLIKEKLGWAPSMKLKDGLRIT 329
R D+T K++LG+AP + L++G+R T
Sbjct: 328 RTFDSTKAKDRLGYAPVVPLQEGIRRT 354
>GENEDB_PFALCIPARUM|PF10_0137 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase,
putative" species:5833 "Plasmodium falciparum" [GO:0016491
"oxidoreductase activity" evidence=ISS] [GO:0016857 "racemase and
epimerase activity, acting on carbohydrates and derivatives"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=ISS]
[GO:0009225 "nucleotide-sugar metabolic process" evidence=ISS]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0009225 GO:GO:0016491 GO:GO:0006486
EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 57/233 (24%), Positives = 101/233 (43%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWK----KNEH---MTEDMFCHEFHLVDLRVMDN 83
VTG G + S + +K+E II + + NE+ +T+ +F + DL+ D
Sbjct: 7 VTGGTGLLGSSLREVIKNENKNIIEKENEIIVNSNENKNIITKYIFLSS-EMCDLKDYDK 65
Query: 84 CLKVTKGVDH--VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
V + + + + AA +GG+ ++N+ + NN IS N+++ + R +
Sbjct: 66 SKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISRGIFTL 125
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE--CRVGRF 199
S CI+P L K D + + Y + K E L + Y + + E C +
Sbjct: 126 STCIFPVNCSLPLTEE-KIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWICIIPT- 183
Query: 200 HNIYGPFGTWKGMEKA---PAAFCRKALTSTDKFEMW--GDGLQTRSFTF-ID 246
NIYG + + +E A P+ + L + ++ GDG R F + ID
Sbjct: 184 -NIYGKYDNFN-LENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAVRQFIYNID 234
>UNIPROTKB|Q8IJQ5 [details] [associations]
symbol:PF10_0137 "GDP-fucose synthase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0006486 "protein
glycosylation" evidence=ISS] [GO:0009225 "nucleotide-sugar
metabolic process" evidence=ISS] [GO:0016491 "oxidoreductase
activity" evidence=ISS] [GO:0016857 "racemase and epimerase
activity, acting on carbohydrates and derivatives" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225 GO:GO:0016491
GO:GO:0006486 EMBL:AE014185 HOGENOM:HOG000168011 KO:K02377
ProtClustDB:CLSZ2431446 GO:GO:0016857 RefSeq:XP_001347422.1
ProteinModelPortal:Q8IJQ5 GeneID:810295 KEGG:pfa:PF10_0137
EuPathDB:PlasmoDB:PF3D7_1014000 OMA:IRETCEW Uniprot:Q8IJQ5
Length = 329
Score = 136 (52.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 57/233 (24%), Positives = 101/233 (43%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWK----KNEH---MTEDMFCHEFHLVDLRVMDN 83
VTG G + S + +K+E II + + NE+ +T+ +F + DL+ D
Sbjct: 7 VTGGTGLLGSSLREVIKNENKNIIEKENEIIVNSNENKNIITKYIFLSS-EMCDLKDYDK 65
Query: 84 CLKVTKGVDH--VFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
V + + + + AA +GG+ ++N+ + NN IS N+++ + R +
Sbjct: 66 SKLVFEKYNFTDIIHFAAHVGGLYANKNNNLDFLINNLEISMNVIKLCHKYSISRGIFTL 125
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIE--CRVGRF 199
S CI+P L K D + + Y + K E L + Y + + E C +
Sbjct: 126 STCIFPVNCSLPLTEE-KIHDGKCHQSNEGYSVSKRVLEVLVRFYREKYNYEWICIIPT- 183
Query: 200 HNIYGPFGTWKGMEKA---PAAFCRKALTSTDKFEMW--GDGLQTRSFTF-ID 246
NIYG + + +E A P+ + L + ++ GDG R F + ID
Sbjct: 184 -NIYGKYDNFN-LENAHVIPSIIHKMYLAKVNNTNVYLLGDGSAVRQFIYNID 234
>WB|WBGene00022498 [details] [associations]
symbol:hsd-2 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
HOGENOM:HOG000266975 EMBL:FO081655 PIR:T30003 RefSeq:NP_508851.1
ProteinModelPortal:Q23086 SMR:Q23086 EnsemblMetazoa:ZC8.1
GeneID:191049 KEGG:cel:CELE_ZC8.1 CTD:191049 WormBase:ZC8.1
InParanoid:Q23086 OMA:FERANIT NextBio:947784 Uniprot:Q23086
Length = 374
Score = 134 (52.2 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 52/183 (28%), Positives = 80/183 (43%)
Query: 31 VTGAGGFIASHIARRLKSEG--HYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL--K 86
+ G GGF+ +H+ L+ G II D E T + + +D+ +
Sbjct: 6 IVGGGGFLGAHVISALQKIGCKERIIVVDPCPQEFKTIKIDKSNISYIKASFLDDKVLEN 65
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
+ G V +LAA +G G I + + N + +++ + GVKRF YASS +
Sbjct: 66 ILNGASAVVHLAA-VGHTGLIAGDRKSVHNFNVNGTKQLIKQCKALGVKRFLYASSVAVS 124
Query: 147 PEFKQLETNVSLKESDAWPAEPQ---DAYGLEKLASEE-LCKHYTKDFGIECRVGRFHNI 202
+ L+ NV+ E D P +P+ D Y K +E + T DF C RF I
Sbjct: 125 FIGEPLD-NVT--EDDPLP-DPKKYLDFYSASKAEAETYVLSQSTPDFKTVCL--RFRGI 178
Query: 203 YGP 205
YGP
Sbjct: 179 YGP 181
Score = 42 (19.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 220 CRKALTSTDKFEMWGDGLQTRSFTFID 246
C KA D+ DGL R++ +D
Sbjct: 220 CAKAFALADQMLQNPDGLHGRAYYILD 246
>UNIPROTKB|P67910 [details] [associations]
symbol:rfaD "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:83333 "Escherichia coli K-12" [GO:0097171
"ADP-L-glycero-beta-D-manno-heptose biosynthetic process"
evidence=IEA] [GO:0070401 "NADP+ binding" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006950 "response to stress" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008712 "ADP-glyceromanno-heptose
6-epimerase activity" evidence=IEA;IDA] [GO:0009244
"lipopolysaccharide core region biosynthetic process"
evidence=IEA;IMP] UniPathway:UPA00356 HAMAP:MF_01601
InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 GO:GO:0005829 GO:GO:0006950
GO:GO:0016020 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:U00039
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0009244 GO:GO:0070401 GO:GO:0097171
EMBL:M33577 EMBL:X54492 PIR:JU0299 RefSeq:NP_418076.1
RefSeq:YP_491814.1 PDB:1EQ2 PDB:2X6T PDBsum:1EQ2 PDBsum:2X6T
ProteinModelPortal:P67910 SMR:P67910 DIP:DIP-35958N IntAct:P67910
SWISS-2DPAGE:P67910 PaxDb:P67910 PRIDE:P67910
EnsemblBacteria:EBESCT00000000716 EnsemblBacteria:EBESCT00000000717
EnsemblBacteria:EBESCT00000000718 EnsemblBacteria:EBESCT00000000719
EnsemblBacteria:EBESCT00000016472 GeneID:12934299 GeneID:948134
KEGG:ecj:Y75_p3555 KEGG:eco:b3619 PATRIC:32122725 EchoBASE:EB0831
EcoGene:EG10838 HOGENOM:HOG000167987 KO:K03274 OMA:AVNLWFW
ProtClustDB:PRK11150 BioCyc:EcoCyc:EG10838-MONOMER
BioCyc:ECOL316407:JW3594-MONOMER BioCyc:MetaCyc:EG10838-MONOMER
SABIO-RK:P67910 EvolutionaryTrace:P67910 Genevestigator:P67910
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197
Uniprot:P67910
Length = 310
Score = 134 (52.2 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 67/285 (23%), Positives = 125/285 (43%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMFCHEFHLVD-LRVMDNCLK 86
I VTG GFI S+I + L +G I+ D K+ T+ + + ++ D + D ++
Sbjct: 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDG--TKFVNLVDLNIADYMDKEDFLIQ 59
Query: 87 VTKG-----VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYAS 141
+ G V+ +F+ A + + +M NN S +L + F YAS
Sbjct: 60 IMAGEEFGDVEAIFHEGACSSTTEW---DGKYMMDNNYQYSKELLHYCLEREIP-FLYAS 115
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVG-RFH 200
SA Y + + +E + +P + YG K +E + + + VG R+
Sbjct: 116 SAATYGG--RTSDFIESREYE----KPLNVYGYSKFLFDEYVRQILPEANSQI-VGFRYF 168
Query: 201 NIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT--RSFTFIDECVEGVLRLTKS 258
N+YGP KG + A L + + +++ +G + R F ++ + + L ++
Sbjct: 169 NVYGPREGHKGSMASVAFHLNTQLNNGESPKLF-EGSENFKRDFVYVGDVADVNLWFLEN 227
Query: 259 DFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGR 303
N+G+ S +A+ L++ KK I +IP P+ ++GR
Sbjct: 228 GVSGIFNLGTGRAESFQAVADATLAYH-KKGQIEYIPFPDKLKGR 271
>ZFIN|ZDB-GENE-050417-317 [details] [associations]
symbol:zgc:110348 "zgc:110348" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 ZFIN:ZDB-GENE-050417-317
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 HOGENOM:HOG000168011 GeneTree:ENSGT00390000004681
HOVERGEN:HBG000059 OMA:KNTHINI EMBL:BX663521 IPI:IPI00851573
Ensembl:ENSDART00000100262 Uniprot:B0S7C9
Length = 354
Score = 135 (52.6 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 60/270 (22%), Positives = 114/270 (42%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC 84
E +R+ VTG G + I R +K EG +W ++ + + R +
Sbjct: 40 EPMRVLVTGGSGLVGRAIERVVKEEGRG--GEEWTFLSSKEANLLSAK----ETRAIFEK 93
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMY-NNTMISFNMLEASRISGVKRFFYASSA 143
+ T HV +LAA +GG+ F ++ + NN I+ N+L+ + GV + S
Sbjct: 94 YRPT----HVIHLAAMVGGL-FRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLST 148
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGRFH 200
CI+P+ +T + E+ P D+ Y K + + K +G G
Sbjct: 149 CIFPD----KTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAGILT 204
Query: 201 NIYGPFGTWKGMEKA---PAAFCRKALTSTD--KFEMWGDGLQTRSFTF-IDECVEGVLR 254
N++G + +E P + L + ++WG G R F + +D +
Sbjct: 205 NVFGAHDNFN-IEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWV 263
Query: 255 LTKSDFREPV--NIGSDEMVSMNEMAEIVL 282
L + D +P+ ++G ++ +S+ + A+ V+
Sbjct: 264 LREYDEVDPIILSVGEEDELSIKDCADAVV 293
>TIGR_CMR|BA_3248 [details] [associations]
symbol:BA_3248 "3-beta hydroxysteroid
dehydrogenase/isomerase family protein" species:198094 "Bacillus
anthracis str. Ames" [GO:0006694 "steroid biosynthetic process"
evidence=ISS] [GO:0030283 "testosterone dehydrogenase [NAD(P)]
activity" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 HOGENOM:HOG000167989 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016853 GO:GO:0044237 OMA:ERFGNKS
RefSeq:NP_845549.1 RefSeq:YP_019886.1 RefSeq:YP_029273.1
ProteinModelPortal:Q81NF3 DNASU:1084046
EnsemblBacteria:EBBACT00000013025 EnsemblBacteria:EBBACT00000016605
EnsemblBacteria:EBBACT00000023035 GeneID:1084046 GeneID:2820109
GeneID:2852271 KEGG:ban:BA_3248 KEGG:bar:GBAA_3248 KEGG:bat:BAS3016
ProtClustDB:CLSK918137 BioCyc:BANT260799:GJAJ-3078-MONOMER
BioCyc:BANT261594:GJ7F-3182-MONOMER Uniprot:Q81NF3
Length = 328
Score = 119 (46.9 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 61/268 (22%), Positives = 114/268 (42%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
+++ VTG GF+ +A RLK+ G+ + A+ K + +F L + L+
Sbjct: 1 MKMLVTGGTGFLGQKLAFRLKNMGYEVTATGRNKTIGKVLEQNGIKFVHCPLEDRERVLQ 60
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASSACI 145
V K D++F+ A G + YN N + + +++E S+ G+KR + S+ I
Sbjct: 61 VCKDKDYIFHSGAHSSPWGKYED-----FYNANVLGTKHIIEGSQKYGIKRLIHVSTPSI 115
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
Y + + + V E+ P + Y K +E+ G+ R ++GP
Sbjct: 116 YFYYDERQNVV---ENAKLPDTFVNHYATTKYMAEQAIDQAFAH-GLPVITIRPRALFGP 171
Query: 206 FGTWKGMEKAPAAFCRK-ALTSTDKFEMWGDGLQTRSFTFIDECVEGVL---RLTKSDFR 261
G + + C K AL + D T+++ V+ +L K
Sbjct: 172 -GDNAILPRL-IKVCEKGALPRIGTENVLVD------ITYVENVVDALLLCMHSPKHTLG 223
Query: 262 EPVNIGSDEMVSMNEMAEIVLSFEDKKL 289
+ NI +DE +++ E+ E V+ DK++
Sbjct: 224 QKYNITNDERINLYEVIENVMKRLDKEV 251
Score = 55 (24.4 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 311 KEKLGWAPSMKLKDGLRITYFWIKEQ 336
KE+LG+AP + +++G+ W K Q
Sbjct: 303 KEELGYAPKVSIEEGITKFVDWWKTQ 328
>UNIPROTKB|Q9ZAE8 [details] [associations]
symbol:acbB "dTDP-glucose 4,6-dehydratase" species:134676
"Actinoplanes sp. SE50/110" [GO:0008460 "dTDP-glucose
4,6-dehydratase activity" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 GO:GO:0045226 GO:GO:0008460 TIGRFAMs:TIGR01181
KO:K01710 PANTHER:PTHR10366:SF41 EMBL:Y18523 EMBL:CP003170
RefSeq:YP_006266644.1 ProteinModelPortal:Q9ZAE8 SMR:Q9ZAE8
GeneID:12821023 KEGG:ase:ACPL_3681 Uniprot:Q9ZAE8
Length = 320
Score = 121 (47.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 54/213 (25%), Positives = 87/213 (40%)
Query: 125 MLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
+L+A+ + RF + S+ +Y ++T ++ P P Y K S+ L
Sbjct: 111 LLDAALRHHIGRFLHVSTDEVYGS---IDTG---SWAEGHPLAPNSPYAASKAGSDLLAL 164
Query: 185 HYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTF 244
Y + G++ V R N YGP + EK F + L D ++GDG R +
Sbjct: 165 AYHQTHGMDVVVTRCSNNYGPR---QFPEKMIPLFVTRLLDGLD-VPVYGDGRNIRDWLH 220
Query: 245 I-DECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP-IHHIPGPEGVRG 302
+ D C L L E +IG + E+ EI+L I + +G
Sbjct: 221 VSDHCRGLALALGAGRAGEVYHIGGGWEATNLELTEILLEACGAPASRISFVTDRKGHDR 280
Query: 303 RNS-DNTLIKEKLGWAPSMKLKDGLRITYFWIK 334
R S D + I +LG+ P + DG+ T W +
Sbjct: 281 RYSLDYSKIAGELGYRPRVDFTDGIAETVAWYR 313
Score = 52 (23.4 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 27 LRISVTGAGGFIASHIARRLKS 48
++I VTG GFI SH L S
Sbjct: 1 MKILVTGGAGFIGSHFVTSLIS 22
>UNIPROTKB|F1S2D0 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0008203 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224
EMBL:CU468868 Ensembl:ENSSSCT00000013948 Uniprot:F1S2D0
Length = 361
Score = 134 (52.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 69/283 (24%), Positives = 120/283 (42%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P ++ + +V G GF+ H+ +L G+ + D K + +F L DL
Sbjct: 23 PKDR-KCTVIGGSGFLGQHMVEQLLERGYAVNVFD--KRQGFDNPRV--QFFLGDLCNQQ 77
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
+ KGV VF+ A+ SN+ + Y N + + N++E R +GV++ S
Sbjct: 78 DLYPALKGVSTVFHCASPAPS-----SNNKELFYRVNYIGTKNVIETCREAGVQKLILTS 132
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL---CKHYTKDFGIECRVGR 198
SA + E ++ E + +P D Y K+ E+ K+F + + R
Sbjct: 133 SASVIFEGVDIKNGT---EDLPYAMKPIDYYTETKILQEKTVLGANDPDKNF-LTTAI-R 187
Query: 199 FHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-VL---R 254
H I+GP + + P A KF + G+G FTF++ V G +L R
Sbjct: 188 PHGIFGP----RDPQLVPILI-EAARKGKMKFVI-GNGKNLVDFTFVENVVHGHILAAER 241
Query: 255 LTKSDFR--EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295
L++ + +I +DE V +L+ + + P +HIP
Sbjct: 242 LSRDTGLGGKAFHITNDEPVPFWTFLSRILTGLNYEAPKYHIP 284
>UNIPROTKB|P37761 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:485
"Neisseria gonorrhoeae" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009103
GO:GO:0045226 GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181
GO:GO:0019305 PANTHER:PTHR10366:SF41 EMBL:Z32742 EMBL:Z21508
PIR:S47045 ProteinModelPortal:P37761 SMR:P37761 Uniprot:P37761
Length = 346
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 84/340 (24%), Positives = 140/340 (41%)
Query: 26 KLRISVTGAGGFIASHIARRL-KSEGHYIIASD---WKKN-EHMTE--DMFCHEFHLVDL 78
K I VTG GFI S + R + ++ ++ D + N E +T+ D + F VD+
Sbjct: 6 KKNILVTGGAGFIGSAVVRHIIQNTRDSVVNLDKLTYAGNLESLTDIADNPRYAFEQVDI 65
Query: 79 --RV-MDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR----- 130
R +D + D V +LAA+ I S I N + +F++LEA+R
Sbjct: 66 CDRAELDRVFAQYRP-DAVMHLAAESHVDRAIGSAGEFIR-TNIVGTFDLLEAARAYWQQ 123
Query: 131 ISGVKR----FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY 186
+ KR F + S+ +Y + T+ E+ P P Y K A++ L + +
Sbjct: 124 MPSEKREAFRFHHISTDEVYGDLHG--TDDLFTETT--PYAPSSPYSASKAAADHLVRAW 179
Query: 187 TKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFID 246
+ + + V N YGP + EK AL S ++GDG Q R + F++
Sbjct: 180 QRTYRLPSIVSNCSNNYGPR---QFPEKLIPLMILNAL-SGKPLPVYGDGAQIRDWLFVE 235
Query: 247 ECVEGVLRL-TKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLP------------IHH 293
+ + ++ T+ E NIG + E+ + + + ++ P I
Sbjct: 236 DHARALYQVVTEGVVGETYNIGGHNEKTNLEVVKTICALLEELAPEKPAGVARYEDLITF 295
Query: 294 IPGPEGVRGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 332
+ G R + D I+ LGW P + GLR T W
Sbjct: 296 VQDRPGHDARYAVDAAKIRRDLGWLPLETFESGLRKTVQW 335
>TAIR|locus:2203771 [details] [associations]
symbol:3BETAHSD/D1
"3beta-hydroxysteroid-dehydrogenase/decarboxylase isoform 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA;ISS] [GO:0006694 "steroid
biosynthetic process" evidence=IEA;ISS] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0047012
"sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating)
activity" evidence=IGI;IDA] [GO:0006084 "acetyl-CoA metabolic
process" evidence=RCA] [GO:0016126 "sterol biosynthetic process"
evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic process"
evidence=RCA] [GO:0019745 "pentacyclic triterpenoid biosynthetic
process" evidence=RCA] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 PROSITE:PS50845 InterPro:IPR016040 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016020
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0005789 GO:GO:0016126 EMBL:AC015449
KO:K07748 GO:GO:0047012 EMBL:AY957470 EMBL:AK117478 EMBL:BT005166
EMBL:AY085272 IPI:IPI00543327 IPI:IPI00545978 PIR:F96513
RefSeq:NP_564502.1 RefSeq:NP_849779.1 UniGene:At.38654
ProteinModelPortal:Q9FX01 SMR:Q9FX01 IntAct:Q9FX01 PaxDb:Q9FX01
PRIDE:Q9FX01 EnsemblPlants:AT1G47290.2 GeneID:841132
KEGG:ath:AT1G47290 TAIR:At1g47290 InParanoid:Q9FX01 OMA:YLVELAY
PhylomeDB:Q9FX01 ProtClustDB:CLSN2688501 Genevestigator:Q9FX01
Uniprot:Q9FX01
Length = 439
Score = 118 (46.6 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 58/232 (25%), Positives = 95/232 (40%)
Query: 31 VTGAGGFIASHIARRL-KSEGHYIIASDWKK----NEHMTEDMFCH-------EFHLVDL 78
VTG GF A H+ L + + ++ +D N H + ++ DL
Sbjct: 14 VTGGRGFAARHLVEMLVRYQMFHVRIADLAPAIVLNPHEETGILGEAIRSGRVQYVSADL 73
Query: 79 RVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFF 138
R +K +G + VF++AA + Q +SV + T N+++A GVKR
Sbjct: 74 RNKTQVVKGFQGAEVVFHMAAPDSSINNHQLQYSVNVQGTT----NVIDACIEVGVKRLI 129
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGI-ECRVG 197
Y SS + F + ++ ES +P + D+Y K E L G+ C +
Sbjct: 130 YTSSPSVV--FDGVHGTLNADESLPYPPKHNDSYSATKAEGEALILKANGRSGLLTCCI- 186
Query: 198 RFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249
R +I+GP G + + A KF + GDG FT+++ V
Sbjct: 187 RPSSIFGP-----GDKLMVPSLVTAARAGKSKFII-GDGSNFYDFTYVENVV 232
Score = 59 (25.8 bits), Expect = 6.0e-06, Sum P(2) = 6.0e-06
Identities = 22/90 (24%), Positives = 46/90 (51%)
Query: 244 FIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVR-- 301
F+ + +EG L + + P ++ + + E+A +L K+P+ P VR
Sbjct: 270 FMSQLLEG-LGYERPSIKIPASLMMP-IAYLVELAYKLLGPYGMKVPVLT---PSRVRLL 324
Query: 302 --GRNSDNTLIKEKLGWAPSMKLKDGLRIT 329
R D++ K++LG++P + L++G++ T
Sbjct: 325 SCNRTFDSSKAKDRLGYSPVVPLQEGIKRT 354
>TIGR_CMR|CJE_1273 [details] [associations]
symbol:CJE_1273 "UDP-glucose 4-epimerase" species:195099
"Campylobacter jejuni RM1221" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0044237
eggNOG:COG1087 HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012
InterPro:IPR025308 PANTHER:PTHR10366:SF39 Pfam:PF13950
TIGRFAMs:TIGR01179 KO:K01784 RefSeq:YP_179261.1
ProteinModelPortal:Q5HTX4 STRING:Q5HTX4 GeneID:3231780
KEGG:cjr:CJE1273 PATRIC:20044342 OMA:MMSERIL ProtClustDB:CLSK879103
BioCyc:CJEJ195099:GJC0-1299-MONOMER Uniprot:Q5HTX4
Length = 328
Score = 132 (51.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 76/320 (23%), Positives = 131/320 (40%)
Query: 27 LRISVTGAGGFIASHIARR-LKSEGHYIIASDWKKNEHMT-EDMF---CHEFHLVDLRVM 81
++I ++G G+I SH R+ LK++ + + K + ED+ +F DL
Sbjct: 1 MKILISGGAGYIGSHTLRQFLKTDHEICVLDNLSKGSKIAIEDLQKIRAFKFFEQDLSDF 60
Query: 82 D--NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
L + D + + AA + +Q+ M NNT+ + N++E +GV +F +
Sbjct: 61 QGVKALFEREKFDAIVHFAASIEVFESMQNPLKYYM-NNTVNTTNLIETCLQTGVNKFIF 119
Query: 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK---DFGIECRV 196
+S+A Y E +T V S+ P P + YG KL SEE+ + + +F C +
Sbjct: 120 SSTAATYGE---PQTPVV---SETSPLAPINPYGRSKLMSEEVLRDASMANPEFK-HC-I 171
Query: 197 GRFHNIYGPFGTWKGMEKAP--------AAFCRKALTSTDKFEMWGDGLQTRSFTFIDEC 248
R+ N+ G + ++ P AA C A DK ++GD T+ T I +
Sbjct: 172 LRYFNVAGACMDYTLGQRYPKATLLIKVAAEC--AAGKRDKLFIFGDDYDTKDGTCIRDF 229
Query: 249 VE----GVLRLTKSDFREP-----VNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEG 299
+ L D+ + N+G S+ E+ E + + P G
Sbjct: 230 IHVDDISSAHLATLDYLQENESNVFNVGYGHGFSVKEVIEAMKKVSGVDFKVELAPRRAG 289
Query: 300 VRG-RNSDNTLIKEKLGWAP 318
SD + I+ W P
Sbjct: 290 DPSVLISDASKIRNLTSWQP 309
>UNIPROTKB|Q9KV94 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237
GO:GO:0003978 GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS
PIR:D82345 RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94
DNASU:2614880 GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 131 (51.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
L+I VTGA GF+ + + ++ G+ ++A + + E + L+D+ + +
Sbjct: 9 LKILVTGASGFVGLRVLTQAQNIGYALVAQSRSQQPYSFEQV------LLDITPNTDWER 62
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYN--NTMISFNMLEASRISGVKRFFYASSAC 144
GVD V + AA + M +++ ++ Y NT + N+ + + +GVKRF + SS
Sbjct: 63 ALVGVDCVVHCAARVHQMQETEAD-ALKAYRDVNTQGTLNLAKQAVSAGVKRFIFLSSIK 121
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+ E Q + + + D P D YGL K +E+ + G+E + R +YG
Sbjct: 122 VNGE--QTKAGSAFQHDDQHI--PSDPYGLSKYEAEQQLLELAAETGLEVVIIRPPLVYG 177
>TIGR_CMR|VC_0262 [details] [associations]
symbol:VC_0262 "UDP-glucose 4-epimerase" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0044237 GO:GO:0003978
GO:GO:0006012 HOGENOM:HOG000167991 OMA:RRFVFIS PIR:D82345
RefSeq:NP_229918.1 ProteinModelPortal:Q9KV94 DNASU:2614880
GeneID:2614880 KEGG:vch:VC0262 PATRIC:20079564
ProtClustDB:CLSK793549 Uniprot:Q9KV94
Length = 323
Score = 131 (51.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 46/180 (25%), Positives = 85/180 (47%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
L+I VTGA GF+ + + ++ G+ ++A + + E + L+D+ + +
Sbjct: 9 LKILVTGASGFVGLRVLTQAQNIGYALVAQSRSQQPYSFEQV------LLDITPNTDWER 62
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMYN--NTMISFNMLEASRISGVKRFFYASSAC 144
GVD V + AA + M +++ ++ Y NT + N+ + + +GVKRF + SS
Sbjct: 63 ALVGVDCVVHCAARVHQMQETEAD-ALKAYRDVNTQGTLNLAKQAVSAGVKRFIFLSSIK 121
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG 204
+ E Q + + + D P D YGL K +E+ + G+E + R +YG
Sbjct: 122 VNGE--QTKAGSAFQHDDQHI--PSDPYGLSKYEAEQQLLELAAETGLEVVIIRPPLVYG 177
>CGD|CAL0000448 [details] [associations]
symbol:GAL10 species:5476 "Candida albicans" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0019388
"galactose catabolic process" evidence=IEP;IGI;IMP] [GO:0001403
"invasive growth in response to glucose limitation" evidence=IMP]
[GO:0009272 "fungal-type cell wall biogenesis" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0034599
"cellular response to oxidative stress" evidence=IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0042149 "cellular response to glucose starvation" evidence=IMP]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:0060257 "negative regulation of
flocculation" evidence=IMP] [GO:1900429 "negative regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0033499 "galactose catabolic process via
UDP-galactose" evidence=IEA] [GO:0042125 "protein galactosylation"
evidence=IEA] [GO:0004034 "aldose 1-epimerase activity"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008183 InterPro:IPR011013 InterPro:IPR014718
Pfam:PF01263 Pfam:PF01370 InterPro:IPR016040 CGD:CAL0000448
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0034599
GO:GO:0030246 GO:GO:0042149 GO:GO:0009272 GO:GO:0044237
SUPFAM:SSF74650 GO:GO:0001403 GO:GO:0003978 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AACQ01000118 EMBL:AACQ01000119 Gene3D:2.70.98.10 GO:GO:0019388
GO:GO:0060257 GO:GO:1900429 eggNOG:COG2017 KO:K15917
RefSeq:XP_713732.1 RefSeq:XP_713766.1 ProteinModelPortal:Q59VY6
SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583 GeneID:3644609
KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672 Uniprot:Q59VY6
Length = 675
Score = 138 (53.6 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 50/188 (26%), Positives = 84/188 (44%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKN---EHMTEDMFCHEFHL----VDLRVM 81
I VTG G+I SH L S G+ ++ D N + + F + H+ VD+R
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIRNY 65
Query: 82 DNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEASRISGVKRF 137
+ KV + + V + AA + +G +S + Y NN + N+LE + + VK
Sbjct: 66 EQLNKVFQDYKISGVIHFAA-LKAVG--ESTKIPLAYYDNNVSGTVNLLEVCKANDVKTI 122
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH-YTKDFGIECRV 196
++SSA +Y + + N + + P +P + YG K E + K Y D + +
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 197 GRFHNIYG 204
R+ N G
Sbjct: 183 LRYFNPIG 190
Score = 41 (19.5 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 349 VYGS-SKVVGTQAPVQLGSLRAAD 371
VY + SKVVG + P ++ RA D
Sbjct: 283 VYHAFSKVVGRELPHEVVGRRAGD 306
>UNIPROTKB|Q59VY6 [details] [associations]
symbol:GAL10 "Putative uncharacterized protein GAL10"
species:237561 "Candida albicans SC5314" [GO:0001403 "invasive
growth in response to glucose limitation" evidence=IMP] [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=IGI] [GO:0009272
"fungal-type cell wall biogenesis" evidence=IMP] [GO:0019388
"galactose catabolic process" evidence=IGI;IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0034599 "cellular response
to oxidative stress" evidence=IMP] [GO:0042149 "cellular response
to glucose starvation" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0060257 "negative regulation of flocculation" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008183
InterPro:IPR011013 InterPro:IPR014718 Pfam:PF01263 Pfam:PF01370
InterPro:IPR016040 CGD:CAL0000448 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0034599 GO:GO:0030246 GO:GO:0042149
GO:GO:0009272 GO:GO:0044237 SUPFAM:SSF74650 GO:GO:0001403
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 EMBL:AACQ01000118 EMBL:AACQ01000119
Gene3D:2.70.98.10 GO:GO:0019388 GO:GO:0060257 GO:GO:1900429
eggNOG:COG2017 KO:K15917 RefSeq:XP_713732.1 RefSeq:XP_713766.1
ProteinModelPortal:Q59VY6 SMR:Q59VY6 STRING:Q59VY6 GeneID:3644583
GeneID:3644609 KEGG:cal:CaO19.11156 KEGG:cal:CaO19.3672
Uniprot:Q59VY6
Length = 675
Score = 138 (53.6 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 50/188 (26%), Positives = 84/188 (44%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKN---EHMTEDMFCHEFHL----VDLRVM 81
I VTG G+I SH L S G+ ++ D N + + F + H+ VD+R
Sbjct: 6 ILVTGGAGYIGSHTVIELISNGYKVVIVDNLSNSSYDAVARIEFIVKQHVPFYDVDIRNY 65
Query: 82 DNCLKVTKG--VDHVFNLAADMGGMGFIQSNHSVIMY--NNTMISFNMLEASRISGVKRF 137
+ KV + + V + AA + +G +S + Y NN + N+LE + + VK
Sbjct: 66 EQLNKVFQDYKISGVIHFAA-LKAVG--ESTKIPLAYYDNNVSGTVNLLEVCKANDVKTI 122
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH-YTKDFGIECRV 196
++SSA +Y + + N + + P +P + YG K E + K Y D + +
Sbjct: 123 VFSSSATVYGDVTRFGDNSMIPIPEHCPMDPTNPYGRTKFIIESILKDIYNSDDAWKVAI 182
Query: 197 GRFHNIYG 204
R+ N G
Sbjct: 183 LRYFNPIG 190
Score = 41 (19.5 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 349 VYGS-SKVVGTQAPVQLGSLRAAD 371
VY + SKVVG + P ++ RA D
Sbjct: 283 VYHAFSKVVGRELPHEVVGRRAGD 306
>UNIPROTKB|Q6T1X6 [details] [associations]
symbol:rmd "GDP-6-deoxy-D-mannose reductase" species:143495
"Aneurinibacillus thermoaerophilus" [GO:0033705
"GDP-4-dehydro-6-deoxy-D-mannose reductase activity" evidence=IDA]
[GO:0055114 "oxidation-reduction process" evidence=IDA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 EMBL:AY442352
PDB:2PK3 PDBsum:2PK3 ProteinModelPortal:Q6T1X6 SMR:Q6T1X6
BRENDA:1.1.1.281 EvolutionaryTrace:Q6T1X6 GO:GO:0033705
Uniprot:Q6T1X6
Length = 309
Score = 130 (50.8 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 71/313 (22%), Positives = 130/313 (41%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN--C 84
+R +TG GF+ ++A L + + + + NE ++ ++ L +MD+
Sbjct: 1 MRALITGVAGFVGKYLANHLTEQNVEVFGTS-RNNEAKLPNV-----EMISLDIMDSQRV 54
Query: 85 LKVTKGV--DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVK-RFFYAS 141
KV + D++F+LAA + N N + ++L+A R S + R
Sbjct: 55 KKVISDIKPDYIFHLAAK-SSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIG 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S+ Y E+ VS +E+ P P YG+ K + L + Y K +G++ R N
Sbjct: 114 SSEEYGMILPEESPVS-EENQLRPMSP---YGVSKASVGMLARQYVKAYGMDIIHTRTFN 169
Query: 202 IYGPFGTWKGMEKAPAAFCRKALT-STDKFE---MWGDGLQTRSFTFIDECVEGVLRLTK 257
GP G G F ++ + +K E G+ R FT + + V+ L++
Sbjct: 170 HIGP-GQSLGF--VTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQ 226
Query: 258 SDFREPV-NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP---GPEGVRGRNSDNTLIKEK 313
V N+ S + ++ +++L+ + K+ P P V N +K+
Sbjct: 227 YGKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQLRPSEVPTLIGSNKRLKDS 286
Query: 314 LGWAPSMKLKDGL 326
GW P + L+ L
Sbjct: 287 TGWKPRIPLEKSL 299
>TAIR|locus:2123466 [details] [associations]
symbol:UGE5 "UDP-D-glucose/UDP-D-galactose 4-epimerase 5"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IDA] [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0005975 "carbohydrate metabolic process" evidence=IEA]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0016857
"racemase and epimerase activity, acting on carbohydrates and
derivatives" evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
InterPro:IPR001509 InterPro:IPR005886 InterPro:IPR008089
Pfam:PF01370 PRINTS:PR01713 UniPathway:UPA00214 InterPro:IPR016040
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
EMBL:AL161518 ProtClustDB:PLN02240 EMBL:AF080118 EMBL:AL049525
EMBL:AY065354 EMBL:AY117180 EMBL:AY140073 EMBL:AY085528
IPI:IPI00540537 PIR:T01881 PIR:T04291 RefSeq:NP_192834.1
UniGene:At.48845 ProteinModelPortal:Q9SN58 SMR:Q9SN58 IntAct:Q9SN58
STRING:Q9SN58 PaxDb:Q9SN58 PRIDE:Q9SN58 EnsemblPlants:AT4G10960.1
GeneID:826696 KEGG:ath:AT4G10960 TAIR:At4g10960 InParanoid:Q9SN58
OMA:ADKAWNA PhylomeDB:Q9SN58 Genevestigator:Q9SN58 Uniprot:Q9SN58
Length = 351
Score = 131 (51.2 bits), Expect = 9.8e-06, P = 9.8e-06
Identities = 77/340 (22%), Positives = 139/340 (40%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNE-----HMTEDMFC-H----EFHLVDL 78
+ V+G G+I SH +L G+ ++ D N + + H FH VDL
Sbjct: 6 VLVSGGAGYIGSHTVLQLLLGGYSVVVVDNLDNSSAVSLQRVKKLAAEHGERLSFHQVDL 65
Query: 79 R---VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI-SFNMLEASRISGV 134
R ++ TK D V + A + +G ++ YNN ++ + +LE G
Sbjct: 66 RDRSALEKIFSETK-FDAVIHFAG-LKAVGE-SVEKPLLYYNNNLVGTITLLEVMAQHGC 122
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKH-YTKDFGIE 193
K ++SSA +Y K++ ++ +P + YG KL EE+C+ Y D +
Sbjct: 123 KNLVFSSSATVYGSPKEVPC------TEEFPISALNPYGRTKLFIEEICRDVYGSDPEWK 176
Query: 194 CRVGRFHNIYG--PFGTW----KGMEKAPAAFCRK-ALTSTDKFEMWG------DGLQTR 240
+ R+ N G P G +G+ F ++ A+ ++G DG R
Sbjct: 177 IILLRYFNPVGAHPSGDIGEDPRGIPNNLMPFVQQVAVGRRPHLTVFGNDYNTKDGTGVR 236
Query: 241 SFTFIDECVEG-VLRLTK-SDFR---EPVNIGSDEMVSMNEMAEIVLSFEDKKLPI---H 292
+ + + +G + L K D + E N+G+ S+ EM + KK+P+
Sbjct: 237 DYIHVIDLADGHIAALRKLEDCKIGCEVYNLGTGNGTSVLEMVDAFEKASGKKIPLVIAG 296
Query: 293 HIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
PG V +++ + +L W +++ R + W
Sbjct: 297 RRPGDAEVVYASTERA--ESELNWKAKYGIEEMCRDLWNW 334
>TIGR_CMR|CHY_0545 [details] [associations]
symbol:CHY_0545 "UDP-glucose 4-epimerase" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=ISS] [GO:0006012 "galactose
metabolic process" evidence=ISS] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 InterPro:IPR016040 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0044237 eggNOG:COG1087
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
RefSeq:YP_359403.1 ProteinModelPortal:Q3AEN1 SMR:Q3AEN1
STRING:Q3AEN1 GeneID:3728483 KEGG:chy:CHY_0545 PATRIC:21274237
OMA:DTEDGSC BioCyc:CHYD246194:GJCN-546-MONOMER Uniprot:Q3AEN1
Length = 327
Score = 130 (50.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 71/328 (21%), Positives = 137/328 (41%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT 88
I VTG G+I SHI R+L + ++ D H + + D + L++
Sbjct: 2 ILVTGGAGYIGSHIVRQLCLKNEKVLVVDNLSKGHKKAVDTRAKLIVGDFGDENLLLEIF 61
Query: 89 KGVD--HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIY 146
K D V ++AA +G S N + ++L+ + VK+ ++S+A +Y
Sbjct: 62 KKYDIKAVIHMAAQ-SLVGESMSQPEKYFEENISKTLSLLKVMLKANVKKMVFSSTAAVY 120
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG-- 204
E ++ ++ +P +P + YG KL E+ + Y + G R+ N G
Sbjct: 121 GEPEKWPI------TEDFPQKPTNVYGYSKLVIEQCLEWYRQIHGFNYVSLRYFNAAGAD 174
Query: 205 PFGTWKGMEKAPAAFC-----RKALTSTDKFEMWG------DGLQTRSFTFIDECVEG-V 252
P G G + P + L ++ ++G DG R + +++ E +
Sbjct: 175 PSGDI-GEDHNPETHLIPLIFKVILGEQEELTVFGTDYPTPDGTCIRDYIHVNDLAEAHI 233
Query: 253 LRLTKSDFREP--VNIGSDEMVSMNEMAEIVLSFEDKKLPIHH---IPGPEGVRGRNSDN 307
L L K + E N+G+ + S+ E+ ++ K+ + + PG V +S+
Sbjct: 234 LALNKLNKDESGVYNLGNQKGFSVKEIIKVAEEVTGVKVKVRYGQRRPGDPAVLVASSEK 293
Query: 308 TLIKEKLGWAPSM-KLKDGLRITYFWIK 334
I+++L + P +K ++ + W K
Sbjct: 294 --IQKELNFTPKFGDIKTIVQTAWEWHK 319
>TAIR|locus:2041974 [details] [associations]
symbol:AXS1 "UDP-D-apiose/UDP-D-xylose synthase 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=IDA]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=IDA]
[GO:0051287 "NAD binding" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.40.50.720 GO:GO:0051287 EMBL:AC005824 GO:GO:0048040
KO:K12449 ProtClustDB:PLN02427 EMBL:AF361574 EMBL:AY086830
EMBL:BT001016 EMBL:AY442191 EMBL:AY735589 EMBL:AY924751
IPI:IPI00541963 PIR:G84677 RefSeq:NP_180353.1 UniGene:At.23574
ProteinModelPortal:Q9ZUY6 SMR:Q9ZUY6 STRING:Q9ZUY6 PRIDE:Q9ZUY6
EnsemblPlants:AT2G27860.1 GeneID:817332 KEGG:ath:AT2G27860
TAIR:At2g27860 HOGENOM:HOG000261188 InParanoid:Q9ZUY6 OMA:EYKENAQ
PhylomeDB:Q9ZUY6 BioCyc:ARA:AT2G27860-MONOMER
BioCyc:MetaCyc:AT2G27860-MONOMER ArrayExpress:Q9ZUY6
Genevestigator:Q9ZUY6 GO:GO:0009226 Uniprot:Q9ZUY6
Length = 389
Score = 92 (37.4 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 29/86 (33%), Positives = 47/86 (54%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDW--KKNEHMTEDMFCH-----EFH 74
P + L I + GAGGFI SH+ +L +E H ++A D K +H+ E +FH
Sbjct: 14 PIQPLTICMIGAGGFIGSHLCEKLLTETPHKVLALDVYNDKIKHLLEPDTVEWSGRIQFH 73
Query: 75 LVDLRVMDNCLK-VTKGVDHVFNLAA 99
++++ D+ L+ + K D + NLAA
Sbjct: 74 RINIK-HDSRLEGLVKMADLIINLAA 98
Score = 65 (27.9 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 29/123 (23%), Positives = 56/123 (45%)
Query: 171 AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP---F-----GTWKGMEKAPAAFCRK 222
+Y K E L + G+E + R N GP F G +G+ + A F
Sbjct: 184 SYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNN 243
Query: 223 ALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREP---VNIGS-DEMVSMNEMA 278
L + ++ G R+F +I++ +E VL + ++ R N+G+ + V++ ++A
Sbjct: 244 LLRR-EPLKLVDGGESQRTFVYINDAIEAVLLMIENPERANGHIFNVGNPNNEVTVRQLA 302
Query: 279 EIV 281
E++
Sbjct: 303 EMM 305
Score = 52 (23.4 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 303 RNSDNTLIKEKLGWAPSMKLKDGLRIT 329
R D T+I +LGW P L D L T
Sbjct: 341 RIPDMTIINRQLGWNPKTSLWDLLEST 367
>ZFIN|ZDB-GENE-061013-348 [details] [associations]
symbol:zgc:153776 "zgc:153776" species:7955 "Danio
rerio" [GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0044237 "cellular metabolic process"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-061013-348 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
UniGene:Dr.92565 EMBL:BC124732 IPI:IPI00805523
RefSeq:NP_001070752.1 ProteinModelPortal:Q08BG6 PRIDE:Q08BG6
GeneID:768139 KEGG:dre:768139 InParanoid:Q08BG6 NextBio:20918459
Bgee:Q08BG6 Uniprot:Q08BG6
Length = 320
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 66/320 (20%), Positives = 130/320 (40%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC 84
E +R+ VTG G + I R +K EG +W ++ E + R +
Sbjct: 6 EPMRVLVTGGSGLVGRAIERVVKDEGRE--GEEWTFLSSKDANLLSAE----ETRAIFQK 59
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMY-NNTMISFNMLEASRISGVKRFFYASSA 143
+ T HV +LAA +GG+ F ++ + NN I+ N+L+ + GV + S
Sbjct: 60 YRPT----HVIHLAAMVGGL-FRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLST 114
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGRFH 200
CI+P+ +T + E+ P D+ Y K + + K +G
Sbjct: 115 CIFPD----KTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTSVIPT 170
Query: 201 NIYGPFGTWK--GMEKAPAAFCRKALTSTD--KFEMWGDGLQTRSFTF-IDECVEGVLRL 255
N++G + P + L + ++WG G R F + +D + L
Sbjct: 171 NVFGAHDNFNIDDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWVL 230
Query: 256 TKSDFREPV--NIGSDEMVSMNEMAEIVL-SFEDKKLPIHHIPGPEGVRGRNSDNTLIKE 312
+ D +P+ ++G ++ +S+ + A+ V+ + K I+ +G + + N +++
Sbjct: 231 REYDEVDPIILSVGEEDELSIKDCADAVVDALGFKGDVIYDTSKADGQFKKTASNAKLRQ 290
Query: 313 KLGWAPSMKLKDGLRITYFW 332
L ++ ++ T W
Sbjct: 291 YLPDFQFTPFREAIKETCDW 310
>UNIPROTKB|Q2KIT8 [details] [associations]
symbol:TSTA3 "Tissue specific transplantation antigen P35B"
species:9913 "Bos taurus" [GO:0050577 "GDP-L-fucose synthase
activity" evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA]
[GO:0019673 "GDP-mannose metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0019835 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 OMA:IHCAGRV GeneTree:ENSGT00390000004681
CTD:7264 HOVERGEN:HBG000059 OrthoDB:EOG4VT5XR GO:GO:0042350
EMBL:DAAA02037463 EMBL:BC112514 IPI:IPI00728290
RefSeq:NP_001039604.1 UniGene:Bt.64492 STRING:Q2KIT8
Ensembl:ENSBTAT00000049133 GeneID:513158 KEGG:bta:513158
InParanoid:Q2KIT8 NextBio:20870730 Uniprot:Q2KIT8
Length = 321
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 69/329 (20%), Positives = 130/329 (39%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P RI VTG G + I +++ +G + DW D+ R +
Sbjct: 4 PRGTRRILVTGGSGLVGRAI-QKVVEDGARLPGEDWVFVSSKDADLT----DAAQTRALF 58
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
++ T HV +LAA +GG+ F +++ + N I+ N+L ++ GV++
Sbjct: 59 QQVQPT----HVIHLAAMVGGL-FRNIKYNLDFWRKNIHINDNVLHSAFEVGVRKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S CI+P+ + ++ + P Y K + + Y + G N
Sbjct: 114 STCIFPDKTTYPIDETMIHNGP-PHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTN 172
Query: 202 IYGPFGTWKGMEKA---PAAFCRKAL--TSTDKFEMWGDGLQTRSFTF-IDECVEGVLRL 255
++GP + +E P + L +S +WG G R F + +D + L
Sbjct: 173 VFGPHDNFS-IEDGHVLPGLIHKVHLAKSSGSALTVWGTGRPRRQFIYSLDLARLFIWAL 231
Query: 256 TKSDFREPV--NIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGVRGRNSDNTLIKE 312
+ D EP+ ++G ++ VS+ E AE V+ D + +G + + N ++
Sbjct: 232 REYDEVEPIILSVGEEDEVSVQEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNAKLRA 291
Query: 313 KLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
L K ++ T W + E+ +
Sbjct: 292 YLPDFRFTPFKQAVKETCAWFTDNYEQAR 320
>UNIPROTKB|E2RM30 [details] [associations]
symbol:TSTA3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0019673
"GDP-mannose metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0019673 KO:K02377 GO:GO:0050577 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 GO:GO:0042350
EMBL:AAEX03008935 RefSeq:XP_532346.2 ProteinModelPortal:E2RM30
Ensembl:ENSCAFT00000002068 GeneID:475116 KEGG:cfa:475116
NextBio:20851008 Uniprot:E2RM30
Length = 321
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 63/276 (22%), Positives = 117/276 (42%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P +RI VTG G + I +++ ++G + DW D+ R +
Sbjct: 4 PGGSVRILVTGGSGLVGRAI-QKVVADGAGLPGEDWVFVSSKDADLT----DAAQTRALF 58
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
++ T HV +LAA +GG+ F +++ + N I+ N+L ++ GV++
Sbjct: 59 EKVRPT----HVIHLAAMVGGL-FRNIKYNLDFWRKNVHINDNVLHSAFEVGVRKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGR 198
S CI+P+ +T + E+ P ++ Y K + + Y + G
Sbjct: 114 STCIFPD----KTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVI 169
Query: 199 FHNIYGPFGTWKGMEKA---PAAFCRKAL--TSTDKFEMWGDGLQTRSFTF-IDECVEGV 252
N++GP + +E P + L +S +WG G R F + +D +
Sbjct: 170 PTNVFGPHDNFN-IEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFI 228
Query: 253 LRLTKSDFREPV--NIGSDEMVSMNEMAEIVLSFED 286
L + + EP+ ++G ++ VS+ E AE V+ D
Sbjct: 229 WVLREYNEVEPIILSVGEEDEVSIQEAAEAVVEAMD 264
>UNIPROTKB|Q13630 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0019835 "cytolysis" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=TAS] [GO:0042351 "'de novo'
GDP-L-fucose biosynthetic process" evidence=IEA;IDA;TAS]
[GO:0042356 "GDP-4-dehydro-D-rhamnose reductase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IC] [GO:0007159
"leukocyte cell-cell adhesion" evidence=NAS] [GO:0019673
"GDP-mannose metabolic process" evidence=IDA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] InterPro:IPR001509
Pfam:PF01370 UniPathway:UPA00128 InterPro:IPR016040 GO:GO:0005737
eggNOG:COG0451 DrugBank:DB00157 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0009055 GO:GO:0050662 GO:GO:0019835 GO:GO:0016853
EMBL:CH471162 GO:GO:0007159 GO:GO:0019673 HOGENOM:HOG000168011
KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV EMBL:U58766
EMBL:AK313560 EMBL:BC001941 EMBL:BC093061 IPI:IPI00014361
RefSeq:NP_003304.1 UniGene:Hs.404119 PDB:4B8W PDBsum:4B8W
ProteinModelPortal:Q13630 SMR:Q13630 IntAct:Q13630 STRING:Q13630
PhosphoSite:Q13630 DMDM:13124123 REPRODUCTION-2DPAGE:IPI00014361
PaxDb:Q13630 PeptideAtlas:Q13630 PRIDE:Q13630 DNASU:7264
Ensembl:ENST00000425753 Ensembl:ENST00000529064 GeneID:7264
KEGG:hsa:7264 UCSC:uc003yza.2 CTD:7264 GeneCards:GC08M144694
HGNC:HGNC:12390 HPA:HPA023361 MIM:137020 neXtProt:NX_Q13630
PharmGKB:PA37056 HOVERGEN:HBG000059 InParanoid:Q13630
OrthoDB:EOG4VT5XR PhylomeDB:Q13630 GenomeRNAi:7264 NextBio:28399
ArrayExpress:Q13630 Bgee:Q13630 CleanEx:HS_TSTA3
Genevestigator:Q13630 GermOnline:ENSG00000104522 GO:GO:0042356
Uniprot:Q13630
Length = 321
Score = 127 (49.8 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 68/332 (20%), Positives = 136/332 (40%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P +RI VTG G + I +++ ++G + DW D+ R +
Sbjct: 4 PQGSMRILVTGGSGLVGKAI-QKVVADGAGLPGEDWVFVSSKDADLT----DTAQTRALF 58
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
++ T HV +LAA +GG+ F +++ + N ++ N+L ++ G ++
Sbjct: 59 EKVQPT----HVIHLAAMVGGL-FRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGR 198
S CI+P+ +T + E+ P ++ Y K + + Y + +G
Sbjct: 114 STCIFPD----KTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVI 169
Query: 199 FHNIYGPFGTWKGMEKA---PAAFCRKAL--TSTDKFEMWGDGLQTRSFTF-IDECVEGV 252
N++GP + +E P + L +S +WG G R F + +D +
Sbjct: 170 PTNVFGPHDNFN-IEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFI 228
Query: 253 LRLTKSDFREPV--NIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGVRGRNSDNTL 309
L + + EP+ ++G ++ VS+ E AE V+ D + +G + + N+
Sbjct: 229 WVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTTKSDGQFKKTASNSK 288
Query: 310 IKEKLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
++ L K ++ T W + E+ +
Sbjct: 289 LRTYLPDFRFTPFKQAVKETCAWFTDNYEQAR 320
>UNIPROTKB|E9PKL9 [details] [associations]
symbol:TSTA3 "GDP-L-fucose synthase" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0044237 "cellular metabolic
process" evidence=IEA] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0019835 "cytolysis" evidence=IEA] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835 GO:GO:0044237
EMBL:AC067930 HGNC:HGNC:12390 IPI:IPI00981359
ProteinModelPortal:E9PKL9 SMR:E9PKL9 Ensembl:ENST00000529048
ArrayExpress:E9PKL9 Bgee:E9PKL9 Uniprot:E9PKL9
Length = 268
Score = 125 (49.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 61/276 (22%), Positives = 117/276 (42%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P +RI VTG G + I +++ ++G + DW D+ R +
Sbjct: 4 PQGSMRILVTGGSGLVGKAI-QKVVADGAGLPGEDWVFVSSKDADLT----DTAQTRALF 58
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
++ T HV +LAA +GG+ F +++ + N ++ N+L ++ G ++
Sbjct: 59 EKVQPT----HVIHLAAMVGGL-FRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGR 198
S CI+P+ +T + E+ P ++ Y K + + Y + +G
Sbjct: 114 STCIFPD----KTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVI 169
Query: 199 FHNIYGPFGTWKGMEKA---PAAFCRKAL--TSTDKFEMWGDGLQTRSFTF-IDECVEGV 252
N++GP + +E P + L +S +WG G R F + +D +
Sbjct: 170 PTNVFGPHDNFN-IEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLFI 228
Query: 253 LRLTKSDFREPV--NIGSDEMVSMNEMAEIVLSFED 286
L + + EP+ ++G ++ VS+ E AE V+ D
Sbjct: 229 WVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMD 264
>ZFIN|ZDB-GENE-050417-163 [details] [associations]
symbol:nsdhl "NAD(P) dependent steroid
dehydrogenase-like" species:7955 "Danio rerio" [GO:0016616
"oxidoreductase activity, acting on the CH-OH group of donors, NAD
or NADP as acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 ZFIN:ZDB-GENE-050417-163 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 KO:K07748 CTD:50814 HOVERGEN:HBG054675 EMBL:BC093332
IPI:IPI00570211 RefSeq:NP_001017674.1 UniGene:Dr.84494
ProteinModelPortal:Q566U2 STRING:Q566U2 GeneID:550369
KEGG:dre:550369 InParanoid:Q566U2 NextBio:20879621
ArrayExpress:Q566U2 Uniprot:Q566U2
Length = 345
Score = 127 (49.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 69/281 (24%), Positives = 121/281 (43%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
PS K R +V G GF+ H+ RL G+ + D ++ + F ++ L D +
Sbjct: 7 PSSK-RCTVIGGSGFLGRHLVERLVDRGYTVNVFDIRQAYELPGVTF-YQGDLCDKLALV 64
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASS 142
LK V VF+ A+ G + ++ N + +++A +GV++ SS
Sbjct: 65 MALKE---VSIVFHCASPAPG----SDDGALFQRVNIDGTRTVIQACHEAGVQKLILTSS 117
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELC-KHYTKDFGIECRVGRFHN 201
A + E ++ KE + +P D Y K+ E+L + +K+ G R H
Sbjct: 118 ASVVFEGTDIKNG---KEDLPYAKKPIDYYTETKIKQEKLVLEACSKEKGFLTVAIRPHG 174
Query: 202 IYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-VLRLT--KS 258
I+GP + + P A KF + GDG FT+++ V G +L K+
Sbjct: 175 IFGP----RDPQLVPI-LVDTARRGKMKFII-GDGSNLVDFTYVENVVHGHILAAEHLKA 228
Query: 259 DFR---EPVNIGSDEMVSMNE-MAEIVLSFEDKKLPIHHIP 295
D + +I +DE V + M++I++ P +H+P
Sbjct: 229 DSPLCGQAYHITNDEPVRFWDFMSQILVGL-GYSAPRYHLP 268
>UNIPROTKB|Q15738 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0047012 "sterol-4-alpha-carboxylate 3-dehydrogenase
(decarboxylating) activity" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA] [GO:0060716 "labyrinthine layer
blood vessel development" evidence=IEA] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=TAS] [GO:0006695 "cholesterol biosynthetic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] UniPathway:UPA00770 Reactome:REACT_111217
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 DrugBank:DB00157 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0005789 OMA:IQLQPTF
GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:CH471172 EMBL:U82671 KO:K07748 GO:GO:0047012
CTD:50814 HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:U47105
EMBL:BC000245 EMBL:BC007816 IPI:IPI00019407 RefSeq:NP_001123237.1
RefSeq:NP_057006.1 UniGene:Hs.57698 ProteinModelPortal:Q15738
SMR:Q15738 IntAct:Q15738 STRING:Q15738 PhosphoSite:Q15738
DMDM:8488997 REPRODUCTION-2DPAGE:Q15738 PaxDb:Q15738
PeptideAtlas:Q15738 PRIDE:Q15738 DNASU:50814
Ensembl:ENST00000370274 Ensembl:ENST00000440023 GeneID:50814
KEGG:hsa:50814 UCSC:uc004fgs.1 GeneCards:GC0XP151999
HGNC:HGNC:13398 HPA:HPA000248 HPA:HPA000571 MIM:300275 MIM:300831
MIM:308050 neXtProt:NX_Q15738 Orphanet:139 Orphanet:251383
PharmGKB:PA134959020 InParanoid:Q15738 PhylomeDB:Q15738
BioCyc:MetaCyc:HS07423-MONOMER GenomeRNAi:50814 NextBio:53261
ArrayExpress:Q15738 Bgee:Q15738 CleanEx:HS_NSDHL
Genevestigator:Q15738 GermOnline:ENSG00000147383 Uniprot:Q15738
Length = 373
Score = 126 (49.4 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 64/278 (23%), Positives = 115/278 (41%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
R +V G GF+ H+ +L + G+ + D ++ + F L DL +
Sbjct: 39 RCTVIGGSGFLGQHMVEQLLARGYAVNVFDIQQGFDNPQV----RFFLGDLCSRQDLYPA 94
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASSACIY 146
KGV+ VF+ A+ SN+ + Y N + + N++E + +GV++ SSA +
Sbjct: 95 LKGVNTVFHCASPPPS-----SNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVI 149
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL---CKHYTKDFGIECRVGRFHNIY 203
E ++ E + +P D Y K+ E K+F + + R H I+
Sbjct: 150 FEGVDIKNGT---EDLPYAMKPIDYYTETKILQERAVLGANDPEKNF-LTTAI-RPHGIF 204
Query: 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREP 263
GP + + P A KF + G+G FTF++ V G + + R+
Sbjct: 205 GP----RDPQLVPILI-EAARNGKMKFVI-GNGKNLVDFTFVENVVHGHILAAEQLSRDS 258
Query: 264 V------NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295
+I +DE + +L+ + + P +HIP
Sbjct: 259 TLGGKAFHITNDEPIPFWTFLSRILTGLNYEAPKYHIP 296
>UNIPROTKB|Q3ZBE9 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9913 "Bos taurus" [GO:0060716
"labyrinthine layer blood vessel development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0016021 eggNOG:COG0451
HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GeneTree:ENSGT00550000074557 OMA:IQLQPTF GO:GO:0005811
GO:GO:0006695 GO:GO:0001942 GO:GO:0060716 GO:GO:0007224 KO:K07748
GO:GO:0047012 EMBL:BC103389 IPI:IPI00716133 RefSeq:NP_001030559.1
UniGene:Bt.49296 ProteinModelPortal:Q3ZBE9 STRING:Q3ZBE9
PRIDE:Q3ZBE9 Ensembl:ENSBTAT00000012167 GeneID:616694
KEGG:bta:616694 CTD:50814 HOVERGEN:HBG054675 InParanoid:Q3ZBE9
OrthoDB:EOG4NKBVW NextBio:20900265 Uniprot:Q3ZBE9
Length = 356
Score = 125 (49.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 69/282 (24%), Positives = 120/282 (42%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P K R +V G GF+ H+ +L + G+ + D ++ D +F L DL
Sbjct: 18 PKAK-RCTVIGGCGFLGQHMVEQLLARGYAVNVFDIRQGF----DNPRVQFFLGDLCSQQ 72
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
+ KGV VF+ A+ F +N+ + Y N + + N++E + +GV++ S
Sbjct: 73 DLYPALKGVSTVFHCASPPP---F--NNNKELFYRVNYIGTKNVIETCKEAGVQKLILTS 127
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE--LCKHYTKDFGIECRVGRF 199
SA + E ++ E + +P D Y K+ E L H + + + R
Sbjct: 128 SASVIFEGVDIKNGT---EDLPYATKPIDYYTETKILQERAVLGAHDPEKNFLTTAI-RP 183
Query: 200 HNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-VL---RL 255
H I+GP + + P A KF M G+G FTF++ V G +L L
Sbjct: 184 HGIFGP----RDPQLVPILI-EAAKKGKMKF-MIGNGKNLVDFTFVENVVHGHILAAEHL 237
Query: 256 TKSDFR--EPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295
++ + +I +DE + +L+ + + P +HIP
Sbjct: 238 SQDTALGGKAFHITNDEPIPFWTFLSRILTGLNYEAPKYHIP 279
>RGD|1359337 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005783 "endoplasmic reticulum" evidence=IEA;ISO] [GO:0005811
"lipid particle" evidence=IEA;ISO] [GO:0006695 "cholesterol
biosynthetic process" evidence=IEA] [GO:0007224 "smoothened
signaling pathway" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008203 "cholesterol
metabolic process" evidence=ISO] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA;ISO] UniPathway:UPA00770 InterPro:IPR002225
Pfam:PF01073 InterPro:IPR016040 RGD:1359337 GO:GO:0005783
GO:GO:0016021 eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854
GO:GO:0000166 Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 KO:K07748 GO:GO:0047012 CTD:50814 HOVERGEN:HBG054675
OrthoDB:EOG4NKBVW EMBL:BC087626 IPI:IPI00360954
RefSeq:NP_001009399.1 UniGene:Rn.23620 ProteinModelPortal:Q5PPL3
STRING:Q5PPL3 PRIDE:Q5PPL3 Ensembl:ENSRNOT00000022985 GeneID:309262
KEGG:rno:309262 InParanoid:Q5PPL3 SABIO-RK:Q5PPL3 NextBio:660517
Genevestigator:Q5PPL3 Uniprot:Q5PPL3
Length = 362
Score = 125 (49.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 70/302 (23%), Positives = 123/302 (40%)
Query: 4 TEGTYGAYTYEELEREPYWPSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEH 63
+E G T +L E S+ + +V G GF+ H+ +L S G+ + D ++
Sbjct: 7 SESKKGQVTGTDLINEV---SKAKKCTVIGGSGFLGQHMVEQLLSRGYAVNVFDVRQGF- 62
Query: 64 MTEDMFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMIS 122
D +F + DL + KGV VF+ A+ SN+ + Y N+ +
Sbjct: 63 ---DNPRVQFFIGDLCNQQDLYPALKGVSTVFHCASPPSN-----SNNKELFYRVNSTGT 114
Query: 123 FNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL 182
++E + +GV++ SSA + E ++ E + +P D Y K+ E
Sbjct: 115 KTVIETCKEAGVQKLILTSSASVVFEGVDIKNGT---EDLPYAMKPIDYYTETKILQERA 171
Query: 183 ---CKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQT 239
K+F + + R H I+GP + + P A KF M G+G
Sbjct: 172 VLDANDPKKNF-LTAAI-RPHGIFGP----RDPQLVPVLI-DAARKGKMKF-MIGNGKNL 223
Query: 240 RSFTFIDECVEGVLRLTKSDFREP------VNIGSDEMVSMNEMAEIVLSFEDKKLPIHH 293
FTF++ V G + + R+ +I +DE + +L+ + + P +H
Sbjct: 224 VDFTFVENVVHGHILAAEHLSRDAGLGGKAFHITNDEPIPFWTFLSRILTGLNYEAPKYH 283
Query: 294 IP 295
IP
Sbjct: 284 IP 285
>UNIPROTKB|P55293 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:562
"Escherichia coli" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AF125322
GO:GO:0009103 GO:GO:0045226 GO:GO:0009243 GO:GO:0008460
TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
PANTHER:PTHR10366:SF41 PIR:S78542 ProteinModelPortal:P55293
SMR:P55293 PRIDE:P55293 SABIO-RK:P55293 Uniprot:P55293
Length = 361
Score = 116 (45.9 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 63/267 (23%), Positives = 116/267 (43%)
Query: 91 VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRI--SGVK-------RFFYAS 141
+D V +LAA+ I + + + N + ++ +LEA+R SG+ RF + S
Sbjct: 74 LDAVMHLAAESHVDRSI-TGPAAFIETNIVGTYVLLEAARNYWSGLDDEKKKNFRFHHIS 132
Query: 142 SACIY---PEFKQLETNVSLK---ESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECR 195
+ +Y P ++ +N +L+ E+ A+ P Y K +S+ L + + + +G+
Sbjct: 133 TDEVYGDLPHPDEVNSNETLQLFTETTAYA--PSSPYSASKASSDHLVRAWKRTYGLPTI 190
Query: 196 VGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL 255
V N YGP+ EK AL ++G G Q R + ++++ + +
Sbjct: 191 VSNCSNNYGPYHF---PEKLIPLVILNALEGK-ALPIYGKGDQIRDWLYVEDHARALYTV 246
Query: 256 -TKSDFREPVNIGS-------DEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNS- 305
T+ E NIG D + ++ ++ EIV + + I ++ G R +
Sbjct: 247 VTEGKAGETYNIGGHNEKKNIDVVFTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAI 306
Query: 306 DNTLIKEKLGWAPSMKLKDGLRITYFW 332
D I +LGW P + G+R T W
Sbjct: 307 DADKISRELGWKPQETFESGIRKTVEW 333
Score = 49 (22.3 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 27 LRISVTGAGGFIASHIARRL 46
++I VTG GFI S + R +
Sbjct: 1 MKILVTGGAGFIGSAVVRHI 20
>UNIPROTKB|G4MX57 [details] [associations]
symbol:MGG_08012 "UDP-glucose 4-epimerase" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:CM001232 KO:K01784 RefSeq:XP_003714962.1
ProteinModelPortal:G4MX57 SMR:G4MX57 EnsemblFungi:MGG_08012T0
GeneID:2678278 KEGG:mgr:MGG_08012 Uniprot:G4MX57
Length = 369
Score = 87 (35.7 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 39/195 (20%), Positives = 76/195 (38%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----DMFCHE---FHLVDLR-- 79
+ +TG G+I S + L + ++ D N ++ C + FH VD+
Sbjct: 6 VLITGGTGYIGSFTSLALLENDYDVVIVDNLYNSSAVAIDRIELICGKRPAFHNVDITDE 65
Query: 80 -VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI--SFNMLEASRISGVKR 136
+D +D V + AA + +G +S + Y + S ++L + + V
Sbjct: 66 AALDKVFDAHPEIDSVIHFAA-LKAVG--ESGEIPLEYYRVNVGGSISLLRSMQKHNVCN 122
Query: 137 FFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRV 196
++SSA +Y + ++ + + E P P + YG K E++ + + +
Sbjct: 123 IVFSSSATVYGDATRVPNMIPIPEH--CPIGPTNTYGRTKSTIEDVISDH-----VNAQR 175
Query: 197 GRFHNIYGPFGTWKG 211
PF W G
Sbjct: 176 NNLKKADKPFDMWNG 190
Score = 81 (33.6 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 25/106 (23%), Positives = 48/106 (45%)
Query: 235 DGLQTRSFTFIDECVEGVLRLTK--SDFREPV---NIGSDEMVSMNEMAEIVLSFEDKKL 289
DG R + + + +G L D + V N+GS ++ EM + S + L
Sbjct: 244 DGTAIRDYIHVLDLAKGHLAALNYLRDNKPGVKAWNLGSGRGSTVFEMIKAFSSVVGRDL 303
Query: 290 PIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFWIK 334
P +P +G V ++ L ++LGW ++++D + + W+K
Sbjct: 304 PYEVVPRRQGDVLDLTANPALANKELGWKTELRMEDACQDLWKWVK 349
>ZFIN|ZDB-GENE-071004-107 [details] [associations]
symbol:zgc:173683 "zgc:173683" species:7955 "Danio
rerio" [GO:0044237 "cellular metabolic process" evidence=IEA]
[GO:0050662 "coenzyme binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-071004-107 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:BC153420 IPI:IPI00997417
RefSeq:NP_001103317.1 UniGene:Dr.92565 ProteinModelPortal:A8E513
GeneID:100126119 KEGG:dre:100126119 NextBio:20788981 Uniprot:A8E513
Length = 320
Score = 123 (48.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 59/270 (21%), Positives = 113/270 (41%)
Query: 25 EKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNC 84
E +R+ VTG G + I R +K EG +W ++ + + R +
Sbjct: 6 EPMRVLVTGGSGLVGRAIERVVKEEGRE--GEEWTFLSSKEANLLSAK----ETRAIFEK 59
Query: 85 LKVTKGVDHVFNLAADMGGMGFIQSNHSVIMY-NNTMISFNMLEASRISGVKRFFYASSA 143
+ T HV +LAA +GG+ F ++ + NN I+ N+L+ + GV + S
Sbjct: 60 YRPT----HVIHLAAMVGGL-FRNMRQNLDFWRNNVFINDNVLQTANEFGVVKVVSCLST 114
Query: 144 CIYPEFKQLETNVSLKESDAWPAEPQDA---YGLEKLASEELCKHYTKDFGIECRVGRFH 200
CI+P+ +T + E+ P D+ Y K + + K +G
Sbjct: 115 CIFPD----KTTYPIDETMIHNGPPHDSNFGYAFAKRMIDVQNRTCFKQYGRRYTAVIPT 170
Query: 201 NIYGPFGTWKGMEKA---PAAFCRKALTSTD--KFEMWGDGLQTRSFTF-IDECVEGVLR 254
N++G + +E P + L + ++WG G R F + +D +
Sbjct: 171 NVFGAHDNFN-IEDGHVLPGLIHKTYLAKKEGKPLQVWGSGKPLRQFIYSLDLARLFLWV 229
Query: 255 LTKSDFREPV--NIGSDEMVSMNEMAEIVL 282
L + D +P+ ++G ++ +S+ + A+ V+
Sbjct: 230 LREYDEVDPIILSVGEEDELSIKDCADAVV 259
>UNIPROTKB|F6XJP3 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0006694 GeneTree:ENSGT00550000074557 OMA:IQLQPTF
Ensembl:ENSCAFT00000030435 EMBL:AAEX03027066
ProteinModelPortal:F6XJP3 Uniprot:F6XJP3
Length = 361
Score = 123 (48.4 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 66/277 (23%), Positives = 117/277 (42%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+ +V G GF+ H+ +L + G+ + D ++ D +F L DL +
Sbjct: 27 KCTVIGGSGFLGQHMVEQLLARGYTVNVFDMRQGF----DNPRVQFFLGDLCSQQDLYPA 82
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASSACIY 146
KGV VF+ A+ SN+ + Y N + + N++E + +GV++ SSA +
Sbjct: 83 LKGVSTVFHCASPPPS-----SNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVI 137
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE--LCKHYTKDFGIECRVGRFHNIYG 204
E ++ E + +P D Y K+ E L + K + + R H I+G
Sbjct: 138 FEGVNIKNGT---EDLPYAMKPIDYYTETKILQERAVLDANDPKRNFLTMAI-RPHGIFG 193
Query: 205 PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-VL---RLTKSDF 260
P + + P A KF M G+G FTF++ V G +L L++
Sbjct: 194 P----RDPQLVPILI-EAARKGKMKF-MIGNGENLVDFTFVENVVHGHILAAEHLSQDTA 247
Query: 261 --REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295
+ +I +DE + +L+ + + P +HIP
Sbjct: 248 VSGKAFHITNDEPIPFWTFLSRILTGLNYEAPKYHIP 284
>UNIPROTKB|E2QVH4 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0001942 "hair
follicle development" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040 GO:GO:0005783
GO:GO:0003854 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0006694
GO:GO:0005811 GO:GO:0008203 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 ProteinModelPortal:E2QVH4 Ensembl:ENSCAFT00000030435
Uniprot:E2QVH4
Length = 373
Score = 123 (48.4 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 66/277 (23%), Positives = 117/277 (42%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+ +V G GF+ H+ +L + G+ + D ++ D +F L DL +
Sbjct: 39 KCTVIGGSGFLGQHMVEQLLARGYTVNVFDMRQGF----DNPRVQFFLGDLCSQQDLYPA 94
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASSACIY 146
KGV VF+ A+ SN+ + Y N + + N++E + +GV++ SSA +
Sbjct: 95 LKGVSTVFHCASPPPS-----SNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVI 149
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEE--LCKHYTKDFGIECRVGRFHNIYG 204
E ++ E + +P D Y K+ E L + K + + R H I+G
Sbjct: 150 FEGVNIKNGT---EDLPYAMKPIDYYTETKILQERAVLDANDPKRNFLTMAI-RPHGIFG 205
Query: 205 PFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-VL---RLTKSDF 260
P + + P A KF M G+G FTF++ V G +L L++
Sbjct: 206 P----RDPQLVPILI-EAARKGKMKF-MIGNGENLVDFTFVENVVHGHILAAEHLSQDTA 259
Query: 261 --REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295
+ +I +DE + +L+ + + P +HIP
Sbjct: 260 VSGKAFHITNDEPIPFWTFLSRILTGLNYEAPKYHIP 296
>TAIR|locus:2200018 [details] [associations]
symbol:AXS2 "UDP-D-apiose/UDP-D-xylose synthase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0009226 "nucleotide-sugar biosynthetic process" evidence=ISS]
[GO:0048040 "UDP-glucuronate decarboxylase activity" evidence=ISS]
[GO:0048046 "apoplast" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
EMBL:CP002684 GO:GO:0005829 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0048046 GO:GO:0044237
EMBL:AC011438 EMBL:BT001220 IPI:IPI00543705 PIR:C86216
RefSeq:NP_563807.1 UniGene:At.20110 ProteinModelPortal:Q9SGE0
SMR:Q9SGE0 STRING:Q9SGE0 PRIDE:Q9SGE0 ProMEX:Q9SGE0
EnsemblPlants:AT1G08200.1 GeneID:837341 KEGG:ath:AT1G08200
TAIR:At1g08200 InParanoid:Q9SGE0 KO:K12449 OMA:RAFTDID
PhylomeDB:Q9SGE0 ProtClustDB:PLN02427 Genevestigator:Q9SGE0
Uniprot:Q9SGE0
Length = 389
Score = 86 (35.3 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEG-HYIIASDW--KKNEHMTEDMFCH-----EFH 74
P + + I + GAGGFI SH+ +L +E H ++A D K +H+ E +FH
Sbjct: 14 PIKPMTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVQWAGRIQFH 73
Query: 75 LVDLRVMDNCLK-VTKGVDHVFNLAA 99
++++ D+ L+ + K D NLAA
Sbjct: 74 RINIK-HDSRLEGLIKMADLTINLAA 98
Score = 64 (27.6 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 36/148 (24%), Positives = 65/148 (43%)
Query: 147 PEFKQLETNVSLKESDAWPAEPQD-AYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
PEF L+ ++S E Q +Y K E L + G+E + R N GP
Sbjct: 161 PEFYVLKEDIS--PCIFGSIEKQRWSYACAKQLIERLVYAEGAENGLEFTIVRPFNWIGP 218
Query: 206 ---F-----GTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTK 257
F G +G+ + A F L + ++ G R+F +I + +E VL + +
Sbjct: 219 RMDFIPGIDGPSEGVPRVLACFSNNLLRR-EPLKLVDGGESQRTFIYIKDAIEAVLLMIE 277
Query: 258 SDFREP---VNIGS-DEMVSMNEMAEIV 281
+ R N+G+ + V++ ++AE++
Sbjct: 278 NPERANGHIFNVGNPNNEVTVRQLAEMM 305
Score = 52 (23.4 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 303 RNSDNTLIKEKLGWAPSMKLKDGLRIT 329
R D T+I +LGW P L D L T
Sbjct: 341 RIPDMTIINRQLGWNPKTSLWDLLEST 367
>TIGR_CMR|CBU_0689 [details] [associations]
symbol:CBU_0689 "GDP-mannose 4,6-dehydratase"
species:227377 "Coxiella burnetii RSA 493" [GO:0008446 "GDP-mannose
4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR006368 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0005622 GenomeReviews:AE016828_GR GO:GO:0019673 GO:GO:0008446
TIGRFAMs:TIGR01472 HOGENOM:HOG000168003 HSSP:P93031 EMBL:AF387640
ProteinModelPortal:Q93N54 SMR:Q93N54 PRIDE:Q93N54 PATRIC:17930061
ProtClustDB:CLSK914242 BioCyc:CBUR227377:GJ7S-687-MONOMER
Uniprot:Q93N54
Length = 348
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 62/285 (21%), Positives = 117/285 (41%)
Query: 56 SDWKKNEHMTED-MFCHEFHLVDLRVMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVI 114
SD + +H +F H + D V++ + K + V+NLAA ++ + +
Sbjct: 45 SDIYEEKHKENARLFLHYGDITDGLVLNKLIHEIKPHE-VYNLAAQ----SHVRVSFDIP 99
Query: 115 MYNNTMI---SFNMLEASR-ISGVK--RFFYASSACIYPEFKQLETNVSLKESDAWPAEP 168
+Y I + N+LEA + K RF+ ASS+ +Y + K S+ ++++ P P
Sbjct: 100 VYTMETIGLGTLNILEAIKNADNAKEIRFYQASSSEMYGDVK------SVPQTESTPFNP 153
Query: 169 QDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTD 228
+ Y K+ + +Y + +G+ G N P + + + K L +
Sbjct: 154 RSPYACAKVFAHYQTINYRESYGLHASTGILFNHESPRRGETFVTRKITSGIAKILAGLE 213
Query: 229 KFEMWGDGLQTRSFTFIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKK 288
K G+ R + + + VE + + + D + I + E S+ E+ E + +
Sbjct: 214 KKIYLGNLEAKRDWGYAKDYVEAMWLMLQQDTPDDYVIATGETWSVKELLEYSFNLVNLN 273
Query: 289 LPIHHIPGPEGVRGRNSDNTL-----IKEKLGWAPSMKLKDGLRI 328
+ P+ R D L KEKLGW P+ ++I
Sbjct: 274 WRDFVVIDPKYYRPAEVDLLLGEPKKAKEKLGWQPNTSFHKLIKI 318
>UNIPROTKB|C9JFU6 [details] [associations]
symbol:UXS1 "UDP-glucuronic acid decarboxylase 1"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
GO:GO:0005739 GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 EMBL:AC018878 HGNC:HGNC:17729
IPI:IPI00916816 ProteinModelPortal:C9JFU6 SMR:C9JFU6 STRING:C9JFU6
Ensembl:ENST00000444193 ArrayExpress:C9JFU6 Bgee:C9JFU6
Uniprot:C9JFU6
Length = 121
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 29/92 (31%), Positives = 43/92 (46%)
Query: 118 NTMISFNMLEASRISGVKRFFYASSACIYPEFKQLETNVSLKESDAW----PAEPQDAYG 173
NT+ + NML ++ G R AS++ +Y + V + D W P P+ Y
Sbjct: 11 NTIGTLNMLGLAKRVGA-RLLLASTSEVYGD-----PEVHPQSEDYWGHVNPIGPRACYD 64
Query: 174 LEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
K +E +C Y K G+E RV R N +GP
Sbjct: 65 EGKRVAETMCYAYMKQEGVEVRVARIFNTFGP 96
>TIGR_CMR|SO_3188 [details] [associations]
symbol:SO_3188 "dTDP-glucose 4,6-dehydratase"
species:211586 "Shewanella oneidensis MR-1" [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=ISS] [GO:0009103
"lipopolysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0009225 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0008460
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 HSSP:P26391 RefSeq:NP_718744.1
ProteinModelPortal:Q8ECF4 SMR:Q8ECF4 GeneID:1170881
KEGG:son:SO_3188 PATRIC:23526058 OMA:NAARATW Uniprot:Q8ECF4
Length = 375
Score = 113 (44.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 42/182 (23%), Positives = 72/182 (39%)
Query: 161 SDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPFGTWKGMEKAPAAFC 220
++ P P Y K +S+ L + + + +G V N YGP+ EK
Sbjct: 174 TETTPYTPSSPYSASKASSDHLVRAWLRTYGFPTIVTNCSNNYGPYHF---PEKLIPLVI 230
Query: 221 RKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL-TKSDFREPVNIGSDEMVSMNEMAE 279
AL ++G G Q R + ++++ + ++ T+ E NIG E+ +
Sbjct: 231 LNALEGKP-LPIYGKGDQIRDWLYVEDHARALFKVVTEGKVGETYNIGGHNEKRNLEVVQ 289
Query: 280 IVLSFEDKKLP--------IHHIPGPEGVRGRNS-DNTLIKEKLGWAPSMKLKDGLRITY 330
+ S D +P I ++ G R + D T + +L W P + GLR T
Sbjct: 290 TICSILDSLVPKNTPYAEQIAYVADRPGHDRRYAIDATKMSAELDWQPQETFETGLRKTV 349
Query: 331 FW 332
W
Sbjct: 350 EW 351
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 27 LRISVTGAGGFIASHIARRL 46
++I VTG GFI S + R +
Sbjct: 1 MKILVTGGAGFIGSAVVRHI 20
>FB|FBgn0034794 [details] [associations]
symbol:Gmer "GDP-4-keto-6-deoxy-D-mannose
3,5-epimerase/4-reductase" species:7227 "Drosophila melanogaster"
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISS] [GO:0042356 "GDP-4-dehydro-D-rhamnose reductase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0050662 "coenzyme binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=IDA] [GO:0042350
"GDP-L-fucose biosynthetic process" evidence=IDA] [GO:0033227
"dsRNA transport" evidence=IMP] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 EMBL:AE013599 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0016853
GO:GO:0033227 KO:K02377 GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV
EMBL:AM231688 EMBL:AY060873 EMBL:AY119148 RefSeq:NP_611734.1
UniGene:Dm.739 ProteinModelPortal:Q9W1X8 SMR:Q9W1X8 STRING:Q9W1X8
PaxDb:Q9W1X8 PRIDE:Q9W1X8 EnsemblMetazoa:FBtr0071905 GeneID:37638
KEGG:dme:Dmel_CG3495 CTD:37638 FlyBase:FBgn0034794
GeneTree:ENSGT00390000004681 InParanoid:Q9W1X8 OrthoDB:EOG4XWDDK
PhylomeDB:Q9W1X8 GenomeRNAi:37638 NextBio:804682 Bgee:Q9W1X8
GermOnline:CG3495 Uniprot:Q9W1X8
Length = 321
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 48/204 (23%), Positives = 93/204 (45%)
Query: 93 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSACIYPEFKQL 152
HV +LAA +GG+ +N+ + NN +I+ N+L+ + G + S CI+P+
Sbjct: 58 HVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFPDKTSY 117
Query: 153 ETNVSLKESDAWPAEPQD-AYGLEKLASEELCKHYTKDFG------IECRVGRFHNIYGP 205
+ ++ + P P + Y K + Y +G I C + H+ Y P
Sbjct: 118 PIDETMVHNG--PPHPSNYGYSYAKRLIDVQNHAYHDKYGRVYTSVIPCNIFGPHDNYNP 175
Query: 206 FGTW--KGM-EKAPAAFCRKA-LTSTDK-FEMWGDGLQTRSFTFIDECVEGVLRLTKS-D 259
+ GM + K + DK F ++G G+ R F + + E ++ + ++ +
Sbjct: 176 EVSHVIPGMIYRMHQLVTEKTDVPENDKVFTVFGSGMPLRQFVYSRDLAELMIWVLRNYE 235
Query: 260 FREPVNIGSDEM--VSMNEMAEIV 281
EP+ + +DE+ V++ E+A+ V
Sbjct: 236 SVEPIILSADEVQEVTIFEVAQAV 259
>MGI|MGI:98857 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0008152 "metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016853 "isomerase
activity" evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=ISO] [GO:0019835 "cytolysis" evidence=IMP] [GO:0042351
"'de novo' GDP-L-fucose biosynthetic process" evidence=ISO]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050577
"GDP-L-fucose synthase activity" evidence=ISO] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001509 Pfam:PF01370
UniPathway:UPA00128 InterPro:IPR016040 MGI:MGI:98857 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0019835
GO:GO:0016853 GO:GO:0019673 HOGENOM:HOG000168011 KO:K02377
GO:GO:0050577 GO:GO:0042351 OMA:IHCAGRV CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:X53620 EMBL:X53621 EMBL:X53622 EMBL:X53623
EMBL:X53624 EMBL:X53625 EMBL:X53626 EMBL:X53627 EMBL:X53628
EMBL:M30127 EMBL:M30128 EMBL:AK029632 IPI:IPI00133690 PIR:S12516
RefSeq:NP_112478.1 UniGene:Mm.22596 ProteinModelPortal:P23591
SMR:P23591 STRING:P23591 PhosphoSite:P23591 PaxDb:P23591
PRIDE:P23591 Ensembl:ENSMUST00000023231 GeneID:22122 KEGG:mmu:22122
InParanoid:P23591 NextBio:301985 Bgee:P23591 CleanEx:MM_TSTA3
Genevestigator:P23591 GermOnline:ENSMUSG00000022570 Uniprot:P23591
Length = 321
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 67/329 (20%), Positives = 130/329 (39%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P +RI VTG G + I +++ ++G + +W D L D
Sbjct: 4 PHGSMRILVTGGSGLVGRAI-QKVVADGAGLPGEEWVFVSSKDAD-------LTDAAQTQ 55
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
+ + HV +LAA +GG+ F +++ + N I+ N+L ++ G ++
Sbjct: 56 ALFQKVQPT-HVIHLAAMVGGL-FRNIKYNLDFWRKNVHINDNVLHSAFEVGARKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S CI+P+ + ++ + P Y K + + Y + G N
Sbjct: 114 STCIFPDKTTYPIDETMIHNGP-PHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTAVIPTN 172
Query: 202 IYGPFGTWKGMEKA---PAAFCRKALT-STDK-FEMWGDGLQTRSFTF-IDECVEGVLRL 255
++GP+ + +E P + L S+D +WG G R F + +D + L
Sbjct: 173 VFGPYDNFN-IEDGHVLPGLIHKVHLAKSSDSALTVWGTGKPRRQFIYSLDLARLFIWVL 231
Query: 256 TKSDFREPV--NIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGVRGRNSDNTLIKE 312
+ EP+ ++G ++ VS+ E AE V+ D + +G + + N ++
Sbjct: 232 REYSEVEPIILSVGEEDEVSIKEAAEAVVEAMDFNGEVTFDSTKSDGQYKKTASNGKLRS 291
Query: 313 KLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
L K ++ T W + E+ +
Sbjct: 292 YLPDFRFTPFKQAVKETCTWFTDNYEQAR 320
>TIGR_CMR|BA_5700 [details] [associations]
symbol:BA_5700 "UDP-glucose 4-epimerase" species:198094
"Bacillus anthracis str. Ames" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=ISS] [GO:0006012 "galactose metabolic process"
evidence=ISS] InterPro:IPR001509 InterPro:IPR005886
InterPro:IPR008089 Pfam:PF01370 PRINTS:PR01713 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0044237
HOGENOM:HOG000168001 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784
HSSP:Q14376 RefSeq:NP_847846.1 RefSeq:YP_022385.1
RefSeq:YP_031541.1 ProteinModelPortal:Q81JK4 SMR:Q81JK4
DNASU:1085447 EnsemblBacteria:EBBACT00000009571
EnsemblBacteria:EBBACT00000018180 EnsemblBacteria:EBBACT00000022977
GeneID:1085447 GeneID:2816576 GeneID:2853003 KEGG:ban:BA_5700
KEGG:bar:GBAA_5700 KEGG:bat:BAS5304 OMA:TENNIDW
ProtClustDB:CLSK888129 BioCyc:BANT260799:GJAJ-5377-MONOMER
BioCyc:BANT261594:GJ7F-5553-MONOMER Uniprot:Q81JK4
Length = 338
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 68/335 (20%), Positives = 137/335 (40%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHM-----TEDMFCHEFHLVDLRVM 81
+ I +TG G+I SH L + + II D N + +++ +F V+
Sbjct: 1 MAILITGGAGYIGSHTCVELLNNNYKIIVVDNLSNSSIESLNRVKEITGKQFEFYKENVL 60
Query: 82 D----NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRF 137
+ N + + ++ V + A +G + YNN + + + + + VK F
Sbjct: 61 NREKMNEIFLENNIEAVIHFAG-FKAVGESTTTPLAYYYNNIISAIVLCDVMQKHNVKNF 119
Query: 138 FYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTK-DFGIECRV 196
++SSA +Y K L ++ +P + YG KL E++ + K D +
Sbjct: 120 IFSSSATVYGIPKTLPI------TEEFPLSVTNPYGQTKLMIEQIMRDVAKADDEWSIAL 173
Query: 197 GRFHNIYGPFGTWK------GMEKAPAAFCRK-ALTSTDKFEMWG------DGLQTRSFT 243
R+ N +G + + G+ + + A+ + ++G DG R +
Sbjct: 174 LRYFNPFGAHQSGRIGEDPNGIPNNLMPYVTQVAVGKLKELNIFGNDYPTKDGTGVRDYI 233
Query: 244 FIDECVEGVLR----LTKSDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPG--P 297
+ + +G ++ + K+ E N+G+ + S+ EM + KK+P + + G P
Sbjct: 234 HVVDLAKGHVKALEKVLKTKGIEAYNLGTGKGYSVLEMVKAFEKVSGKKIP-YKVIGRRP 292
Query: 298 EGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
V +D + K +LGW L++ ++ W
Sbjct: 293 GDVAICFADVSKAKRELGWEAEYGLEEMCVDSWRW 327
>UNIPROTKB|O53634 [details] [associations]
symbol:gca "POSSIBLE GDP-MANNOSE 4,6-DEHYDRATASE GCA
(GDP-D-MANNOSE DEHYDRATASE)" species:83332 "Mycobacterium
tuberculosis H37Rv" [GO:0040007 "growth" evidence=IMP]
InterPro:IPR001509 InterPro:IPR020904 Pfam:PF01370 PROSITE:PS00061
InterPro:IPR016040 GO:GO:0040007 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0016491 EMBL:BX842572 GO:GO:0044237
GO:GO:0055114 KO:K01711 GO:GO:0008446 HOGENOM:HOG000167992
HSSP:P32054 EMBL:CP003248 PIR:C70840 RefSeq:NP_214626.1
RefSeq:NP_334530.1 RefSeq:YP_006513430.1 SMR:O53634 DNASU:886907
EnsemblBacteria:EBMYCT00000003264 EnsemblBacteria:EBMYCT00000070103
GeneID:13316094 GeneID:886907 GeneID:922974 KEGG:mtc:MT0121
KEGG:mtu:Rv0112 KEGG:mtv:RVBD_0112 PATRIC:18121990
TubercuList:Rv0112 OMA:CSGVATR ProtClustDB:CLSK790272
Uniprot:O53634
Length = 318
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 48/183 (26%), Positives = 80/183 (43%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCH-EFHLVD-LRVMDNC 84
+++ +TGAGG + SH+A L + GH + A+ + ++ F E + D V D+
Sbjct: 1 MKVWITGAGGMMGSHLAEMLLAAGHDVYATYCRPTIDPSDLQFNGAEVDITDWCSVYDSI 60
Query: 85 LKVTKGVDHVFNLAADM-GGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASS 142
T D VF+LAA + + + ++ T I F L R+ + A S
Sbjct: 61 --ATFRPDAVFHLAAQSYPAVSWARPVETLTTNMVGTAIVFEALR--RVRPHAKIIVAGS 116
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNI 202
+ Y E ++ + + P P YG+ K A++ L Y K +G+ V R N
Sbjct: 117 SAEYGFVDPSEVPIN-ERRELRPLHP---YGVSKAATDMLAYQYHKSYGMHTVVARIFNC 172
Query: 203 YGP 205
GP
Sbjct: 173 TGP 175
>RGD|1307028 [details] [associations]
symbol:Tsta3 "tissue specific transplantation antigen P35B"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0019673 "GDP-mannose metabolic process"
evidence=IEA;ISO] [GO:0019835 "cytolysis" evidence=IEA;ISO]
[GO:0042351 "'de novo' GDP-L-fucose biosynthetic process"
evidence=ISO] [GO:0050577 "GDP-L-fucose synthase activity"
evidence=IEA;ISO] [GO:0050662 "coenzyme binding" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 RGD:1307028
GO:GO:0003824 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 EMBL:CH473950 KO:K02377 OMA:IHCAGRV
GeneTree:ENSGT00390000004681 CTD:7264 RefSeq:NP_001120927.1
RefSeq:NP_001257718.1 UniGene:Rn.6606 Ensembl:ENSRNOT00000012306
GeneID:300036 KEGG:rno:300036 NextBio:646179 Uniprot:G3V762
Length = 321
Score = 119 (46.9 bits), Expect = 0.00018, P = 0.00018
Identities = 67/329 (20%), Positives = 130/329 (39%)
Query: 23 PSEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMD 82
P +RI VTG G + I +++ ++G + +W D L D
Sbjct: 4 PHGSMRILVTGGSGLVGRAI-QKVVADGAGLPGEEWVFVSSKDAD-------LTDAAQTQ 55
Query: 83 NCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYAS 141
+ + HV +LAA +GG+ F +++ + N I+ N+L ++ G ++
Sbjct: 56 ALFQKVQPT-HVIHLAAMVGGL-FRNIKYNLDFWRKNVHINDNVLHSAFEVGTRKVVSCL 113
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
S CI+P+ + ++ + P Y K + + Y + G N
Sbjct: 114 STCIFPDKTTYPIDETMIHNGP-PHSSNFGYSYAKRMIDVQNRAYFQQHGCTFTSVIPTN 172
Query: 202 IYGPFGTWKGMEKA---PAAFCRKAL--TSTDKFEMWGDGLQTRSFTF-IDECVEGVLRL 255
++GP+ + +E P + L +S +WG G R F + +D + L
Sbjct: 173 VFGPYDNFN-IEDGHVLPGLIHKVHLAKSSGSALTVWGTGKPRRQFIYSLDLARLFIWVL 231
Query: 256 TKSDFREPV--NIGSDEMVSMNEMAEIVLSFEDKKLPI-HHIPGPEGVRGRNSDNTLIKE 312
+ + EP+ ++G ++ VS+ E AE V+ D + +G + + N ++
Sbjct: 232 REYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFSGEVTFDSTKSDGQYKKTASNGKLRS 291
Query: 313 KLGWAPSMKLKDGLRITYFWIKEQIEKEK 341
L K ++ T W E E+ +
Sbjct: 292 YLPDFCFTPFKQAVKETCAWFTENYEQAR 320
>UNIPROTKB|Q06963 [details] [associations]
symbol:hldD "ADP-L-glycero-D-manno-heptose-6-epimerase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008712 "ADP-glyceromanno-heptose 6-epimerase activity"
evidence=ISS] [GO:0009244 "lipopolysaccharide core region
biosynthetic process" evidence=ISS] UniPathway:UPA00356
HAMAP:MF_01601 InterPro:IPR001509 InterPro:IPR011912 Pfam:PF01370
UniPathway:UPA00958 InterPro:IPR016040 eggNOG:COG0451
Gene3D:3.40.50.720 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0050661 GO:GO:0009244 EMBL:X59554 GO:GO:0097171 KO:K03274
OMA:AVNLWFW ProtClustDB:PRK11150 GO:GO:0008712
PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547 EMBL:U47542
EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 68/291 (23%), Positives = 115/291 (39%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL-K 86
I VTG G I S+I + L G I+ D KN +++ + + D D+ L +
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLV--DLQIADYMDRDDFLAQ 59
Query: 87 VTKGVDHVFNLAADMGGM--GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
+ G D F A G + + +M NN S +L + F YASSA
Sbjct: 60 IMAGDDFGFIDAIFHEGACSATTEWDGKYVMLNNYEYSKELLHYCLDREIP-FLYASSAA 118
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY-----TKDFGIECRVG-R 198
Y E T+ ++E A + YG K + + D + G R
Sbjct: 119 TYGE-----TDTFIEEPQYEGA--LNVYGYSKQQFDNYVRRLWLDAKQHDETLSQITGFR 171
Query: 199 FHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW-GDGLQTRSFTFIDECVEGVLRLTK 257
+ N+YGP KG + A + + + +++ G R F ++ + L
Sbjct: 172 YFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWFLD 231
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNT 308
N G+ + S NE+A+ V++F + + IP P+ ++G + T
Sbjct: 232 HGVSGIFNCGTGKAESFNEVAKAVIAFHGRG-EVETIPFPDHLKGAYQEFT 281
>TIGR_CMR|VC_0240 [details] [associations]
symbol:VC_0240 "ADP-L-glycero-D-mannoheptose-6-epimerase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008712
"ADP-glyceromanno-heptose 6-epimerase activity" evidence=ISS]
[GO:0009244 "lipopolysaccharide core region biosynthetic process"
evidence=ISS] UniPathway:UPA00356 HAMAP:MF_01601 InterPro:IPR001509
InterPro:IPR011912 Pfam:PF01370 UniPathway:UPA00958
InterPro:IPR016040 eggNOG:COG0451 Gene3D:3.40.50.720 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0050661 GO:GO:0009244 EMBL:X59554
GO:GO:0097171 KO:K03274 OMA:AVNLWFW ProtClustDB:PRK11150
GO:GO:0008712 PANTHER:PTHR10366:SF29 TIGRFAMs:TIGR02197 EMBL:X90547
EMBL:U47542 EMBL:AB012956 EMBL:AB012957 PIR:JC4066 PIR:T44311
RefSeq:NP_229897.1 ProteinModelPortal:Q06963 SMR:Q06963
DNASU:2614708 GeneID:2614708 KEGG:vch:VC0240 PATRIC:20079524
Uniprot:Q06963
Length = 314
Score = 118 (46.6 bits), Expect = 0.00023, P = 0.00023
Identities = 68/291 (23%), Positives = 115/291 (39%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHY-IIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCL-K 86
I VTG G I S+I + L G I+ D KN +++ + + D D+ L +
Sbjct: 2 IIVTGGAGMIGSNIIKALNERGITDILVVDHLKNGRKFKNLV--DLQIADYMDRDDFLAQ 59
Query: 87 VTKGVDHVFNLAADMGGM--GFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSAC 144
+ G D F A G + + +M NN S +L + F YASSA
Sbjct: 60 IMAGDDFGFIDAIFHEGACSATTEWDGKYVMLNNYEYSKELLHYCLDREIP-FLYASSAA 118
Query: 145 IYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHY-----TKDFGIECRVG-R 198
Y E T+ ++E A + YG K + + D + G R
Sbjct: 119 TYGE-----TDTFIEEPQYEGA--LNVYGYSKQQFDNYVRRLWLDAKQHDETLSQITGFR 171
Query: 199 FHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMW-GDGLQTRSFTFIDECVEGVLRLTK 257
+ N+YGP KG + A + + + +++ G R F ++ + L
Sbjct: 172 YFNVYGPREQHKGSMASVAFHLNNQMNAGENPKLFAGSENFKRDFVYVGDVAAVNLWFLD 231
Query: 258 SDFREPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHIPGPEGVRGRNSDNT 308
N G+ + S NE+A+ V++F + + IP P+ ++G + T
Sbjct: 232 HGVSGIFNCGTGKAESFNEVAKAVIAFHGRG-EVETIPFPDHLKGAYQEFT 281
>UNIPROTKB|C9JDR0 [details] [associations]
symbol:NSDHL "Sterol-4-alpha-carboxylate 3-dehydrogenase,
decarboxylating" species:9606 "Homo sapiens" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0007224 "smoothened signaling pathway" evidence=IEA]
[GO:0008203 "cholesterol metabolic process" evidence=IEA]
[GO:0060716 "labyrinthine layer blood vessel development"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR002225 Pfam:PF01073 InterPro:IPR016040
GO:GO:0005783 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GO:GO:0008203 GO:GO:0001942
GO:GO:0060716 GO:GO:0007224 EMBL:U82671 HGNC:HGNC:13398
IPI:IPI00646262 ProteinModelPortal:C9JDR0 SMR:C9JDR0 STRING:C9JDR0
PRIDE:C9JDR0 Ensembl:ENST00000432467 ArrayExpress:C9JDR0
Bgee:C9JDR0 Uniprot:C9JDR0
Length = 254
Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
Identities = 55/228 (24%), Positives = 95/228 (41%)
Query: 28 RISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
R +V G GF+ H+ +L + G+ + D ++ + F L DL +
Sbjct: 39 RCTVIGGSGFLGQHMVEQLLARGYAVNVFDIQQGFDNPQV----RFFLGDLCSRQDLYPA 94
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASSACIY 146
KGV+ VF+ A+ SN+ + Y N + + N++E + +GV++ SSA +
Sbjct: 95 LKGVNTVFHCASPPPS-----SNNKELFYRVNYIGTKNVIETCKEAGVQKLILTSSASVI 149
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL---CKHYTKDFGIECRVGRFHNIY 203
E ++ E + +P D Y K+ E K+F + + R H I+
Sbjct: 150 FEGVDIKNGT---EDLPYAMKPIDYYTETKILQERAVLGANDPEKNF-LTTAI-RPHGIF 204
Query: 204 GPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG 251
GP + + P A KF + G+G FTF++ V G
Sbjct: 205 GP----RDPQLVPILI-EAARNGKMKFVI-GNGKNLVDFTFVENVVHG 246
>UNIPROTKB|Q48FN6 [details] [associations]
symbol:PSPPH_3658 "UDP-glucose 4-epimerase, putative"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0003978 "UDP-glucose 4-epimerase activity" evidence=ISS]
[GO:0006012 "galactose metabolic process" evidence=ISS]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 eggNOG:COG0451
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0003978 GO:GO:0006012
HOGENOM:HOG000167991 RefSeq:YP_275800.1 ProteinModelPortal:Q48FN6
STRING:Q48FN6 GeneID:3557056 KEGG:psp:PSPPH_3658 PATRIC:19976742
OMA:LEGWCAM ProtClustDB:CLSK458037 Uniprot:Q48FN6
Length = 326
Score = 118 (46.6 bits), Expect = 0.00025, P = 0.00025
Identities = 43/179 (24%), Positives = 74/179 (41%)
Query: 29 ISVTGAGGFIASHIARRL-KSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKV 87
+++TGA GF+ S + RRL K GH + + + + + L + +
Sbjct: 8 VAITGATGFVGSAVVRRLIKHTGHSVRVA--VRGAYSCSSERINVVSAESLAPDNQWSDL 65
Query: 88 TKGVDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASSACIY 146
G V + AA + + + N + N+ E + +GV+RF + SS
Sbjct: 66 VTGAHVVIHCAARVHVLNETADEPDQEYFRANVTATLNLAEQAAAAGVRRFIFLSSIKAN 125
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGP 205
EF + D P P DAYG+ K +EE + + G++ + R +YGP
Sbjct: 126 GEFTH--PGAPFRADD--PCNPLDAYGVSKQKAEEGLRELSARSGMQVVIIRPVLVYGP 180
>UNIPROTKB|P09147 [details] [associations]
symbol:galE species:83333 "Escherichia coli K-12"
[GO:0006012 "galactose metabolic process" evidence=IDA;IMP]
[GO:0005975 "carbohydrate metabolic process" evidence=IMP]
[GO:0016857 "racemase and epimerase activity, acting on
carbohydrates and derivatives" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0070403 "NAD+ binding" evidence=IDA] [GO:0033499
"galactose catabolic process via UDP-galactose" evidence=IMP]
[GO:0005829 "cytosol" evidence=IDA] [GO:0003978 "UDP-glucose
4-epimerase activity" evidence=IEA;IDA] [GO:0009242 "colanic acid
biosynthetic process" evidence=IEP;IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 Gene3D:3.40.50.720 GO:GO:0070403
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 InterPro:IPR025308 PANTHER:PTHR10366:SF39
Pfam:PF13950 TIGRFAMs:TIGR01179 KO:K01784 GO:GO:0009242
GO:GO:0033499 EMBL:X06226 OMA:THAPIDA EMBL:X51449 EMBL:U07867
EMBL:J01613 PIR:S02089 RefSeq:NP_415280.3 RefSeq:YP_489032.1
PDB:1A9Y PDB:1A9Z PDB:1KVQ PDB:1KVR PDB:1KVS PDB:1KVT PDB:1KVU
PDB:1LRJ PDB:1LRK PDB:1LRL PDB:1NAH PDB:1NAI PDB:1UDA PDB:1UDB
PDB:1UDC PDB:1XEL PDB:2UDP PDBsum:1A9Y PDBsum:1A9Z PDBsum:1KVQ
PDBsum:1KVR PDBsum:1KVS PDBsum:1KVT PDBsum:1KVU PDBsum:1LRJ
PDBsum:1LRK PDBsum:1LRL PDBsum:1NAH PDBsum:1NAI PDBsum:1UDA
PDBsum:1UDB PDBsum:1UDC PDBsum:1XEL PDBsum:2UDP
ProteinModelPortal:P09147 SMR:P09147 DIP:DIP-9728N IntAct:P09147
SWISS-2DPAGE:P09147 PRIDE:P09147 EnsemblBacteria:EBESCT00000004431
EnsemblBacteria:EBESCT00000004432 EnsemblBacteria:EBESCT00000004433
EnsemblBacteria:EBESCT00000014770 GeneID:12932906 GeneID:945354
KEGG:ecj:Y75_p0732 KEGG:eco:b0759 PATRIC:32116719 EchoBASE:EB0357
EcoGene:EG10362 ProtClustDB:PRK10675
BioCyc:EcoCyc:UDPGLUCEPIM-MONOMER BioCyc:ECOL316407:JW0742-MONOMER
BioCyc:MetaCyc:UDPGLUCEPIM-MONOMER SABIO-RK:P09147
EvolutionaryTrace:P09147 Genevestigator:P09147 Uniprot:P09147
Length = 338
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 43/165 (26%), Positives = 71/165 (43%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----EDMFCHEFHLVDLRVM 81
+R+ VTG G+I SH +L GH +I D N + E + V+ +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFI-QSNHSVIMY--NNTMISFNMLEASRISGVKRFF 138
+ L DH + G+ + +S + Y NN + ++ A R + VK F
Sbjct: 61 NEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPA-EPQDAYGLEKLASEEL 182
++SSA +Y + + + ES +P PQ YG KL E++
Sbjct: 121 FSSSATVYGD----QPKIPYVES--FPTGTPQSPYGKSKLMVEQI 159
>WB|WBGene00022616 [details] [associations]
symbol:hsd-3 species:6239 "Caenorhabditis elegans"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0003854 "3-beta-hydroxy-delta5-steroid
dehydrogenase activity" evidence=IEA] [GO:0006694 "steroid
biosynthetic process" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0009058 "biosynthetic process" evidence=IEA]
[GO:0008831 "dTDP-4-dehydrorhamnose reductase activity"
evidence=IEA] [GO:0045226 "extracellular polysaccharide
biosynthetic process" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 eggNOG:COG0451 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
EMBL:FO081547 RefSeq:NP_508852.3 ProteinModelPortal:A4UVJ7
EnsemblMetazoa:ZC449.6 GeneID:260026 KEGG:cel:CELE_ZC449.6
CTD:260026 WormBase:ZC449.6 HOGENOM:HOG000266975 InParanoid:A4UVJ7
OMA:IVVDPNP NextBio:952782 Uniprot:A4UVJ7
Length = 359
Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
Identities = 50/189 (26%), Positives = 80/189 (42%)
Query: 31 VTGAGGFIASHIARRLKSEGHY---IIASDWKKNEHMTE---DMFCHEFH---LVDLRVM 81
+TG GGF+ +H+ L+ G I+ + H + D E+ +D +V+
Sbjct: 9 ITGGGGFLGAHLIAALQKNGDRTKCIVVDPNPRLSHFSAIDFDKSLVEYEKGSFLDRKVL 68
Query: 82 DNCLKVTKGVDHVFNLAA--DMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFY 139
+ +V VF+L A G G + V +N T F ++E + GV RF Y
Sbjct: 69 E---RVLPNAITVFHLCAIGHTGWFGAQKHREYVYAFNVTGTKF-LIEKCKFFGVPRFIY 124
Query: 140 ASSACIYPEFKQLETNVSLKESDAWPAEPQ--DAYGLEKLASEELCKHY-TKDFGIECRV 196
+SS + K + + ES+ +P + + D Y K +E + T F C
Sbjct: 125 SSSIAVVFVGKPI---YNCDESEPYPLKSEYLDIYSSSKAEAEAFVRSQSTIQFKTTCL- 180
Query: 197 GRFHNIYGP 205
RF IYGP
Sbjct: 181 -RFRAIYGP 188
>ASPGD|ASPL0000003882 [details] [associations]
symbol:AN6398 species:162425 "Emericella nidulans"
[GO:0005622 "intracellular" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0050662 "coenzyme binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA]
InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:BN001301
GO:GO:0044237 ProteinModelPortal:C8V0N8
EnsemblFungi:CADANIAT00006581 OMA:KEEHDWR Uniprot:C8V0N8
Length = 280
Score = 116 (45.9 bits), Expect = 0.00030, P = 0.00030
Identities = 70/303 (23%), Positives = 115/303 (37%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDL-RVMDNCL 85
++I++TGA G + + GH + D + E + E D+ D +
Sbjct: 1 MKIAITGARGTVGRACVKLCSKAGHATVQID--RTEQDFDGTPNSEMRTADVANDYDAVV 58
Query: 86 KVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASRISGVKRFFYASSA-- 143
K KG D + +LAA +G + ++ NN +FN A+ G+ R YASS
Sbjct: 59 KAFKGCDALIHLAALPDPVG---KDDWMVHNNNVNAAFNGFHAAATLGINRVCYASSVNA 115
Query: 144 --CIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDF-GIECRVGRFH 200
Y + L+ + + +A P P D+Y L K +E + + F G+ R H
Sbjct: 116 VGLAYAN-RPLKFDYLPLDEEA-PQRPTDSYALAKEEAEAQARSFVNWFPGMNIACLRIH 173
Query: 201 NIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF 260
+ P K ++K + +A ++WG C+ V R
Sbjct: 174 EV-APL---KDVQKEHESNWEEAAVK----QLWG---WVNPEAVARACLLSVERAENLKG 222
Query: 261 REPVNIGSDEMVSMNEMAEIVLSFEDKKLPIHHI-PGPEGVRGR-NSDNTLIKEKLGWAP 318
+ +NI + AE+ K P I PG EG + +D K +GW
Sbjct: 223 CQVLNIAAPTTTQSTPSAELA----KKYYPNAEIRPGLEGNKAFWTTDKA--KRIIGWVH 276
Query: 319 SMK 321
K
Sbjct: 277 EEK 279
>UNIPROTKB|P26391 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:99287
"Salmonella enterica subsp. enterica serovar Typhimurium str. LT2"
[GO:0008460 "dTDP-glucose 4,6-dehydratase activity" evidence=ISS]
[GO:0009103 "lipopolysaccharide biosynthetic process" evidence=ISS]
[GO:0045226 "extracellular polysaccharide biosynthetic process"
evidence=ISS] [GO:0070404 "NADH binding" evidence=IDA]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
Gene3D:3.40.50.720 EMBL:AE006468 EMBL:X56793
GenomeReviews:AE006468_GR GO:GO:0009103 GO:GO:0070404 GO:GO:0045226
GO:GO:0009243 GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088
GO:GO:0019305 HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF PIR:S15299 RefSeq:NP_461042.1
PDB:1G1A PDB:1KEU PDB:1KEW PDBsum:1G1A PDBsum:1KEU PDBsum:1KEW
ProteinModelPortal:P26391 SMR:P26391 PRIDE:P26391 GeneID:1253618
KEGG:stm:STM2097 PATRIC:32382777 EvolutionaryTrace:P26391
Uniprot:P26391
Length = 361
Score = 110 (43.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 51/213 (23%), Positives = 91/213 (42%)
Query: 136 RFFYASSACIY---PEFKQLETNVSLK---ESDAWPAEPQDAYGLEKLASEELCKHYTKD 189
RF + S+ +Y P ++E +V+L E+ A+ P Y K +S+ L + + +
Sbjct: 127 RFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYA--PSSPYSASKASSDHLVRAWRRT 184
Query: 190 FGIECRVGRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECV 249
+G+ V N YGP+ EK AL ++G G Q R + ++++
Sbjct: 185 YGLPTIVTNCSNNYGPYHF---PEKLIPLVILNALEGKP-LPIYGKGDQIRDWLYVEDHA 240
Query: 250 EGV-LRLTKSDFREPVNIGS-------DEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGV 300
+ + +T+ E NIG D + ++ ++ EIV + I ++ G
Sbjct: 241 RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH 300
Query: 301 RGRNS-DNTLIKEKLGWAPSMKLKDGLRITYFW 332
R + D I +LGW P + G+R T W
Sbjct: 301 DRRYAIDAGKISRELGWKPLETFESGIRKTVEW 333
Score = 48 (22.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 27 LRISVTGAGGFIASHIARRL 46
++I +TG GFI S + R +
Sbjct: 1 MKILITGGAGFIGSAVVRHI 20
>UNIPROTKB|E1C279 [details] [associations]
symbol:NSDHL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0005811
"lipid particle" evidence=IEA] [GO:0007224 "smoothened signaling
pathway" evidence=IEA] [GO:0008203 "cholesterol metabolic process"
evidence=IEA] [GO:0060716 "labyrinthine layer blood vessel
development" evidence=IEA] InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 GO:GO:0005783 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006694 GeneTree:ENSGT00550000074557
OMA:IQLQPTF GO:GO:0005811 GO:GO:0008203 GO:GO:0007224 KO:K07748
CTD:50814 EMBL:AADN02013506 IPI:IPI00684598 RefSeq:XP_420279.1
ProteinModelPortal:E1C279 Ensembl:ENSGALT00000032336 GeneID:422302
KEGG:gga:422302 NextBio:20824951 Uniprot:E1C279
Length = 346
Score = 117 (46.2 bits), Expect = 0.00036, P = 0.00036
Identities = 64/273 (23%), Positives = 111/273 (40%)
Query: 31 VTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVTKG 90
V G GF+ H+ +L +G+ + D +K D +F L DL + L +
Sbjct: 14 VIGGSGFLGQHMVEKLLDKGYSVNVFDIQKR--FDHDRV--QFFLGDLCNKEALLPALQD 69
Query: 91 VDHVFNLAADMGGMGFIQSNHSVIMYN-NTMISFNMLEASRISGVKRFFYASSACIYPEF 149
V F+ A+ S++ + Y N M + ++EA + +GV++ SSA + E
Sbjct: 70 VSVAFHCASPAPS-----SDNKELFYKVNFMGTKAVIEACKEAGVQKLVLTSSASVVFEG 124
Query: 150 KQLETNVSLKESDAWPAEPQDAYGLEKLASE-ELCKHYTKDFGIECRVGRFHNIYGPFGT 208
++ E + +P D Y K+ E E+ D R H I+GP
Sbjct: 125 TDIKNGT---EDLPYAKKPIDYYTETKILQEKEVLSANDPDNNFFTTAIRPHGIFGP--- 178
Query: 209 WKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEG-VLRLTKSDFREPV--- 264
+ + P + A + KF + GDG FT+++ V G +L PV
Sbjct: 179 -RDPQLVPILI-QAAKSGKMKFII-GDGKNLVDFTYVENVVHGHILAAEHLRKDSPVCGK 235
Query: 265 --NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295
+I +DE + +L+ + P ++IP
Sbjct: 236 AFHITNDEPIPFWAFMSRILTGLNYDAPKYYIP 268
>UNIPROTKB|Q6A1A4 [details] [associations]
symbol:galE "UDP-galactose 4-epimerase" species:644
"Aeromonas hydrophila" [GO:0003978 "UDP-glucose 4-epimerase
activity" evidence=IDA] [GO:0006012 "galactose metabolic process"
evidence=IC] [GO:0042803 "protein homodimerization activity"
evidence=IDA] InterPro:IPR001509 InterPro:IPR005886 Pfam:PF01370
InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662
GO:GO:0044237 GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AJ785765 ProteinModelPortal:Q6A1A4 SMR:Q6A1A4 Uniprot:Q6A1A4
Length = 338
Score = 117 (46.2 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 42/165 (25%), Positives = 71/165 (43%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMT-----EDMFCHEFHLVDLRVM 81
+R+ VTG G+I SH +L GH ++ D N + E + + V+ +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQSGHDVVILDNLCNSKRSVLPVIERLSGKQPTFVEGDIR 60
Query: 82 DNCLKVTKGVDHVFNLAADMGGMGFI-QSNHSVIMY--NNTMISFNMLEASRISGVKRFF 138
+ L DH G+ + +S + Y NN + ++ A R + VK F
Sbjct: 61 NEALMTEILHDHAIETVIHFAGLKAVGESVAKPLEYYDNNVNGTLRLISAMRAANVKNFI 120
Query: 139 YASSACIYPEFKQLETNVSLKESDAWPA-EPQDAYGLEKLASEEL 182
++SSA +Y + + + ES +P PQ YG KL E++
Sbjct: 121 FSSSATVYGD----QPKIPYVES--FPTGTPQSPYGKSKLMVEQI 159
Score = 39 (18.8 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 287 KKLPIHHIPGPEG-VRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
K + H P +G + +D T ++L W + L + + T+ W
Sbjct: 282 KPVKYHFAPRRDGDLPAYWADATKADKELNWRVTRTLDEMAQDTWHW 328
>MGI|MGI:1099438 [details] [associations]
symbol:Nsdhl "NAD(P) dependent steroid dehydrogenase-like"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001942 "hair follicle development" evidence=IMP]
[GO:0003854 "3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0005811 "lipid particle" evidence=ISO]
[GO:0006629 "lipid metabolic process" evidence=IEA] [GO:0006694
"steroid biosynthetic process" evidence=IEA] [GO:0006695
"cholesterol biosynthetic process" evidence=IEA] [GO:0007224
"smoothened signaling pathway" evidence=IGI] [GO:0008202 "steroid
metabolic process" evidence=IEA] [GO:0008203 "cholesterol metabolic
process" evidence=IMP] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016126
"sterol biosynthetic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016616 "oxidoreductase
activity, acting on the CH-OH group of donors, NAD or NADP as
acceptor" evidence=IEA] [GO:0047012 "sterol-4-alpha-carboxylate
3-dehydrogenase (decarboxylating) activity" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0060716
"labyrinthine layer blood vessel development" evidence=IMP]
UniPathway:UPA00770 InterPro:IPR002225 Pfam:PF01073
InterPro:IPR016040 MGI:MGI:1099438 GO:GO:0005783 GO:GO:0016021
eggNOG:COG0451 HOGENOM:HOG000167989 GO:GO:0003854 GO:GO:0000166
Gene3D:3.40.50.720 GeneTree:ENSGT00550000074557 GO:GO:0005811
GO:GO:0008203 GO:GO:0006695 GO:GO:0001942 GO:GO:0060716
GO:GO:0007224 EMBL:AL021127 KO:K07748 GO:GO:0047012 CTD:50814
HOVERGEN:HBG054675 OrthoDB:EOG4NKBVW EMBL:AF100198 IPI:IPI00128692
RefSeq:NP_035071.3 UniGene:Mm.38792 ProteinModelPortal:Q9R1J0
SMR:Q9R1J0 STRING:Q9R1J0 PhosphoSite:Q9R1J0 PaxDb:Q9R1J0
PRIDE:Q9R1J0 Ensembl:ENSMUST00000033715 GeneID:18194 KEGG:mmu:18194
InParanoid:Q9R1J0 ChiTaRS:NSDHL NextBio:293544 Bgee:Q9R1J0
CleanEx:MM_NSDHL Genevestigator:Q9R1J0
GermOnline:ENSMUSG00000031349 Uniprot:Q9R1J0
Length = 362
Score = 117 (46.2 bits), Expect = 0.00039, P = 0.00039
Identities = 65/282 (23%), Positives = 112/282 (39%)
Query: 24 SEKLRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDN 83
S+ + +V G GF+ H+ +L G+ + D H D +F + DL +
Sbjct: 24 SKAKKCTVIGGSGFLGQHMVEQLLERGYTVNVFDI----HQGFDNPRVQFFIGDLCNQQD 79
Query: 84 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN-MLEASRISGVKRFFYASS 142
KGV VF+ A+ SN+ + Y I ++E R +GV++ SS
Sbjct: 80 LYPALKGVSTVFHCASPPP-----YSNNKELFYRVNFIGTKTVIETCREAGVQKLILTSS 134
Query: 143 ACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEEL---CKHYTKDFGIECRVGRF 199
A + E ++ E + +P D Y K+ E K+F + + R
Sbjct: 135 ASVVFEGVDIKNGT---EDLPYAMKPIDYYTETKILQERAVLDANDPKKNF-LTAAI-RP 189
Query: 200 HNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRLTKSD 259
H I+GP + + P A KF M G+G FTF++ V G + +
Sbjct: 190 HGIFGP----RDPQLVPILI-DAARKGKMKF-MIGNGENLVDFTFVENVVHGHILAAEHL 243
Query: 260 FREPV------NIGSDEMVSMNEMAEIVLSFEDKKLPIHHIP 295
++ +I +DE + +L+ + + P +HIP
Sbjct: 244 SQDAALGGKAFHITNDEPIPFWTFLSRILTGLNYEAPKYHIP 285
>TAIR|locus:2138121 [details] [associations]
symbol:UGE2 "UDP-D-glucose/UDP-D-galactose 4-epimerase 2"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0003978 "UDP-glucose 4-epimerase activity"
evidence=IEA;IGI;IDA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006012 "galactose metabolic process" evidence=IEA] [GO:0044237
"cellular metabolic process" evidence=IEA] [GO:0050662 "coenzyme
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0046983 "protein dimerization activity" evidence=IPI]
[GO:0042546 "cell wall biogenesis" evidence=IMP] InterPro:IPR001509
InterPro:IPR005886 Pfam:PF01370 UniPathway:UPA00214
InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
GO:GO:0050662 GO:GO:0044237 eggNOG:COG1087 HOGENOM:HOG000168001
GO:GO:0003978 GO:GO:0006012 InterPro:IPR025308
PANTHER:PTHR10366:SF39 Pfam:PF13950 TIGRFAMs:TIGR01179
EMBL:AL078468 EMBL:AL161560 KO:K01784 GO:GO:0042546
ProtClustDB:PLN02240 EMBL:BT008539 IPI:IPI00516246 PIR:T08911
RefSeq:NP_194123.1 UniGene:At.3390 ProteinModelPortal:Q9T0A7
SMR:Q9T0A7 IntAct:Q9T0A7 STRING:Q9T0A7 PaxDb:Q9T0A7 PRIDE:Q9T0A7
EnsemblPlants:AT4G23920.1 GeneID:828492 KEGG:ath:AT4G23920
TAIR:At4g23920 InParanoid:Q9T0A7 OMA:THAPIDA PhylomeDB:Q9T0A7
Genevestigator:Q9T0A7 GermOnline:AT4G23920 Uniprot:Q9T0A7
Length = 350
Score = 106 (42.4 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 46/170 (27%), Positives = 71/170 (41%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTE----DMFCHE------FHLVDL 78
+ VTG G+I SH +L G+ + D N E FH VDL
Sbjct: 5 VLVTGGAGYIGSHTVLQLLEGGYSAVVVDNYDNSSAASLQRVKKLAGENGNRLSFHQVDL 64
Query: 79 R---VMDNCLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMI-SFNMLEASRISGV 134
R ++ TK D V + A + +G ++ YNN ++ + +LE G
Sbjct: 65 RDRPALEKIFSETK-FDAVIHFAG-LKAVGE-SVEKPLLYYNNNIVGTVTLLEVMAQYGC 121
Query: 135 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCK 184
K ++SSA +Y K++ +ES P + YG KL EE+C+
Sbjct: 122 KNLVFSSSATVYGWPKEVPCT---EES---PISATNPYGRTKLFIEEICR 165
Score = 51 (23.0 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 23/106 (21%), Positives = 43/106 (40%)
Query: 235 DGLQTRSFTFIDECVEG-VLRLTK-SDFR---EPVNIGSDEMVSMNEMAEIVLSFEDKKL 289
DG R + + + +G + L K D + E N+G+ S+ EM KK+
Sbjct: 230 DGTGVRDYIHVMDLADGHIAALRKLDDLKISCEVYNLGTGNGTSVLEMVAAFEKASGKKI 289
Query: 290 PI---HHIPGPEGVRGRNSDNTLIKEKLGWAPSMKLKDGLRITYFW 332
P+ PG V +++ + +L W +++ R + W
Sbjct: 290 PLVMAGRRPGDAEVVYASTEKA--ERELNWKAKNGIEEMCRDLWNW 333
>UNIPROTKB|P37777 [details] [associations]
symbol:rfbB "dTDP-glucose 4,6-dehydratase" species:623
"Shigella flexneri" [GO:0008460 "dTDP-glucose 4,6-dehydratase
activity" evidence=ISS] [GO:0009103 "lipopolysaccharide
biosynthetic process" evidence=ISS] [GO:0045226 "extracellular
polysaccharide biosynthetic process" evidence=ISS]
InterPro:IPR001509 InterPro:IPR005888 Pfam:PF01370
UniPathway:UPA00124 UniPathway:UPA00281 InterPro:IPR016040
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 EMBL:X71970
EMBL:AE005674 EMBL:AE014073 GenomeReviews:AE005674_GR
GenomeReviews:AE014073_GR GO:GO:0009103 GO:GO:0045226 GO:GO:0009243
GO:GO:0008460 TIGRFAMs:TIGR01181 eggNOG:COG1088 GO:GO:0019305
HOGENOM:HOG000168006 KO:K01710 ProtClustDB:PRK10084
PANTHER:PTHR10366:SF41 OMA:AKKAFRF EMBL:L14842 PIR:S41534
RefSeq:NP_707936.1 RefSeq:NP_837663.1 ProteinModelPortal:P37777
SMR:P37777 EnsemblBacteria:EBESCT00000086479
EnsemblBacteria:EBESCT00000092444 GeneID:1025931 GeneID:1078528
KEGG:sfl:SF2104 KEGG:sfx:S2227 PATRIC:18705961 Uniprot:P37777
Length = 361
Score = 108 (43.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 62/266 (23%), Positives = 113/266 (42%)
Query: 92 DHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEASR-----ISGVK----RFFYASS 142
D V +LAA+ I + + + N + ++ +LEA+R ++ K RF + S+
Sbjct: 75 DAVMHLAAESHVDRSI-TGPAAFIETNIVGTYVLLEAARNYWSALNDEKKKSFRFHHIST 133
Query: 143 ACIY---PEFKQLETNVSLK---ESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRV 196
+Y P + N +L E+ A+ P Y K +S+ L + + + +G+ V
Sbjct: 134 DEVYGDLPHPDEANNNEALPLFTETTAYA--PSSPYSASKASSDHLVRAWKRTYGLPTIV 191
Query: 197 GRFHNIYGPFGTWKGMEKAPAAFCRKALTSTDKFEMWGDGLQTRSFTFIDECVEGVLRL- 255
N YGP+ EK AL ++G G Q R + ++++ + +
Sbjct: 192 TNCSNNYGPYHF---PEKLIPLVILNALEGK-ALPIYGKGDQIRDWLYVEDHARALYTVV 247
Query: 256 TKSDFREPVNIGS-------DEMVSMNEMA-EIVLSFEDKKLPIHHIPGPEGVRGRNS-D 306
T+ E NIG D ++++ ++ EIV + + I ++ G R + D
Sbjct: 248 TEGKAGETYNIGGHNEKKNIDVVLTICDLLDEIVPKEKSYREQITYVADRPGHDRRYAID 307
Query: 307 NTLIKEKLGWAPSMKLKDGLRITYFW 332
I +LGW P + G+R T W
Sbjct: 308 ADKISRELGWKPQETFESGIRKTVEW 333
Score = 49 (22.3 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 27 LRISVTGAGGFIASHIARRL 46
++I VTG GFI S + R +
Sbjct: 1 MKILVTGGAGFIGSAVVRHI 20
>TIGR_CMR|SO_3173 [details] [associations]
symbol:SO_3173 "UDP-galactose 4-epimerase, putative"
species:211586 "Shewanella oneidensis MR-1" [GO:0003978
"UDP-glucose 4-epimerase activity" evidence=ISS] [GO:0006012
"galactose metabolic process" evidence=ISS] InterPro:IPR001509
Pfam:PF01370 InterPro:IPR016040 GO:GO:0003824 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0044237 HOGENOM:HOG000167991
RefSeq:NP_718729.1 ProteinModelPortal:Q8ECG9 GeneID:1170867
KEGG:son:SO_3173 PATRIC:23526030 OMA:HAMSGAP Uniprot:Q8ECG9
Length = 309
Score = 114 (45.2 bits), Expect = 0.00062, P = 0.00062
Identities = 77/328 (23%), Positives = 133/328 (40%)
Query: 29 ISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLKVT 88
I +TGA GF+ I R+L + + K D CH F +L +
Sbjct: 6 ILLTGATGFVGQQILRQLPQDTR--VFGRTKP----ARD--CH-FFAGELTANTDYRSAL 56
Query: 89 KGVDHVFNLAADMGGMGFIQSNHSVIMYN--NTMISFNMLEASRISGVKRFFYASSACIY 146
GVD V + AA M +N++ +Y NT+++ + E + +GVKRF + S+ +
Sbjct: 57 SGVDVVIHCAARAHVMNET-ANNAAQLYQEVNTLVTLALAEQAAAAGVKRFIFISTIKVN 115
Query: 147 PEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYGPF 206
E + + + SDA +P D YG K +E + IE + R +YGP
Sbjct: 116 GE-ATIAGQL-FRASDA--RQPLDHYGESKAKAEIGLFDIARKTEIEVVIIRPPLVYGP- 170
Query: 207 GTWKGMEKAPAAFCRKALTSTDKFEM-WGDGLQTRSFTFIDECVEGVLR-LTKSDFREPV 264
A F + + +G RS +D V+ ++ + + +
Sbjct: 171 -------NVKANFATMLNLAKKNLPLPFGAIHNKRSMVALDNLVDLIVTCIEHPNAANQI 223
Query: 265 NIGSDEM-VSMNEMAEIVLSFEDKK---LPIH--------HIPGPEGVRGRNSDN----- 307
+ SD+ VS E+ +++ KK LP+ + G + + R N
Sbjct: 224 FLVSDDQDVSTTELLKLMTGAAGKKPRLLPVPMAWLILAGKVTGNQAIIDRLCGNLQVDI 283
Query: 308 TLIKEKLGWAPSMKLKDGLRITYFWIKE 335
T K L W P + +++G+R + +KE
Sbjct: 284 THTKNTLSWQPPITVEEGVRRCF--VKE 309
>ZFIN|ZDB-GENE-040722-1 [details] [associations]
symbol:tsta3 "tissue specific transplantation antigen
P35B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0044237 "cellular metabolic process" evidence=IEA] [GO:0050662
"coenzyme binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001509 Pfam:PF01370 InterPro:IPR016040
ZFIN:ZDB-GENE-040722-1 GO:GO:0003824 eggNOG:COG0451 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0044237 HOGENOM:HOG000168011
KO:K02377 GeneTree:ENSGT00390000004681 CTD:7264 HOVERGEN:HBG000059
OrthoDB:EOG4VT5XR EMBL:AL929003 OMA:IRETCEW EMBL:BC086741
IPI:IPI00509474 RefSeq:NP_001008620.1 UniGene:Dr.83537
STRING:Q5SPD5 Ensembl:ENSDART00000057980 GeneID:494077
KEGG:dre:494077 InParanoid:Q5SPD5 NextBio:20865585 Uniprot:Q5SPD5
Length = 318
Score = 114 (45.2 bits), Expect = 0.00066, P = 0.00066
Identities = 65/316 (20%), Positives = 129/316 (40%)
Query: 27 LRISVTGAGGFIASHIARRLKSEGHYIIASDWKKNEHMTEDMFCHEFHLVDLRVMDNCLK 86
+R+ VTG G + I R +K EG +W ++ E + + + +
Sbjct: 5 MRVLVTGGSGLVGRAIERVVK-EGEGREGEEWIFLSSKDANLLSPE----ETKAVFEKHR 59
Query: 87 VTKGVDHVFNLAADMGGMGFIQSNHSVIMY-NNTMISFNMLEASRISGVKRFFYASSACI 145
T HV +LAA +GG+ F ++ + +N I+ N+L+A+ SGV + S CI
Sbjct: 60 PT----HVIHLAAMVGGL-FRNMRQNLDFWRSNVFINDNVLQAAHDSGVVKVVSCLSTCI 114
Query: 146 YPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHNIYG- 204
+P+ + ++ + P E Y K + + + + F N++G
Sbjct: 115 FPDKTTYPIDETMIHNGP-PHESNFGYAYAKRMIDVQNRAFFQQFNRRYTAVIPTNVFGC 173
Query: 205 --PFGTWKGMEKAPAAFCRKALTSTD--KFEMWGDGLQTRSFTF-IDECVEGVLRLTKSD 259
F G P + + + +WG G R F + +D V L + D
Sbjct: 174 HDNFNIEDG-HVLPGLIHKTYIAKKEGKPLVVWGSGRPLRQFIYSLDLARLFVWVLREYD 232
Query: 260 FREPV--NIGSDEMVSMNEMAEIVL-SFEDKKLPIHHIPGPEGVRGRNSDNTLIKEKLGW 316
EP+ ++G ++ +S+ + A+ V+ + E I+ +G + + N +++ L
Sbjct: 233 EVEPIILSVGEEDELSIKDAADAVVEALEFTGDVIYDTSKADGQFKKTASNAKLRKYLPD 292
Query: 317 APSMKLKDGLRITYFW 332
++ ++ T W
Sbjct: 293 FKFTPFREAIKETCDW 308
>POMBASE|SPBPB2B2.11 [details] [associations]
symbol:SPBPB2B2.11 "nucleotide-sugar 4,6-dehydratase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006012 "galactose metabolic process" evidence=IEP] [GO:0008460
"dTDP-glucose 4,6-dehydratase activity" evidence=IEA] [GO:0009225
"nucleotide-sugar metabolic process" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0031506 "cell wall
glycoprotein biosynthetic process" evidence=NAS] [GO:0033554
"cellular response to stress" evidence=IEP] [GO:0042125 "protein
galactosylation" evidence=NAS] [GO:0050662 "coenzyme binding"
evidence=IEA] InterPro:IPR001509 InterPro:IPR005888
InterPro:IPR020904 Pfam:PF01370 InterPro:IPR016040
PomBase:SPBPB2B2.11 GO:GO:0005829 GO:GO:0005634 GO:GO:0033554
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0050662 GO:GO:0009225
EMBL:CU329671 GO:GO:0016491 GO:GO:0055114 GO:GO:0006012
GO:GO:0042125 GO:GO:0031506 GO:GO:0008460 eggNOG:COG1088
HOGENOM:HOG000168006 KO:K01710 PANTHER:PTHR10366:SF41
RefSeq:NP_596857.1 HSSP:P26391 ProteinModelPortal:Q9HDU4
STRING:Q9HDU4 EnsemblFungi:SPBPB2B2.11.1 GeneID:2541398
KEGG:spo:SPBPB2B2.11 OMA:IQYVKDR OrthoDB:EOG4VX5DN NextBio:20802505
Uniprot:Q9HDU4
Length = 365
Score = 96 (38.9 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 45/177 (25%), Positives = 71/177 (40%)
Query: 91 VDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEASRIS-GVKR-------FFYAS 141
+ H+ N AA+ FI + NN + + N+LE RI G K F + S
Sbjct: 91 ITHIINFAAESSVDRSFIDPLY--FTKNNILSTQNLLECVRILLGKKEELRNRLNFVHVS 148
Query: 142 SACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLASEELCKHYTKDFGIECRVGRFHN 201
+ +Y E Q E N S+ E P Y K A + + + Y + I V R +N
Sbjct: 149 TDEVYGE--QDE-NASVDEKSK--LNPTSPYAASKAAVDLIIQSYRYSYKISVTVIRANN 203
Query: 202 IYGPFGTWKGMEKAPAAFCRKALTST------DKFEMWGDGLQTRSFTFIDECVEGV 252
+YGP + + +K + DK + GDGL R + I + + +
Sbjct: 204 VYGPRQYEEKLIPMTLGKLKKFINQKSQKIMQDKITLHGDGLHKRKYLHIYDFINAI 260
Score = 60 (26.2 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 265 NIGSDEMVSMNEMAEIVLS-FEDKKLPIHHIPGPEG---VRGRN-SDN--TLIKEK---L 314
NIGSD+ + + + + F +KL + ++ + V+ RN +D+ +L EK L
Sbjct: 286 NIGSDDEIDNLSLVKFICDYFLYRKLSLKNLDYSKYITFVQDRNYNDSRYSLNYEKIKSL 345
Query: 315 GWAPSMKLKDGLR 327
GW P + L+ GLR
Sbjct: 346 GWRPQIPLETGLR 358
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.410 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 374 374 0.00087 117 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 151
No. of states in DFA: 620 (66 KB)
Total size of DFA: 266 KB (2141 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.61u 0.20s 29.81t Elapsed: 00:00:02
Total cpu time: 29.65u 0.20s 29.85t Elapsed: 00:00:02
Start: Sat May 11 03:02:41 2013 End: Sat May 11 03:02:43 2013
WARNINGS ISSUED: 1