Query 017296
Match_columns 374
No_of_seqs 143 out of 1683
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 12:08:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017296.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017296hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1got_B GT-beta; complex (GTP-b 100.0 1.6E-43 5.6E-48 321.9 40.7 296 8-368 45-340 (340)
2 3iz6_a 40S ribosomal protein R 100.0 2E-44 6.8E-49 332.9 35.0 317 4-371 52-375 (380)
3 1vyh_C Platelet-activating fac 100.0 2E-43 6.8E-48 329.5 36.7 291 9-369 99-409 (410)
4 2pbi_B Guanine nucleotide-bind 100.0 1.7E-42 5.9E-47 316.9 41.4 303 6-368 52-354 (354)
5 3ow8_A WD repeat-containing pr 100.0 8.6E-42 2.9E-46 308.0 38.3 290 10-369 24-319 (321)
6 2ynn_A Coatomer subunit beta'; 100.0 4.8E-40 1.6E-44 294.3 39.8 295 8-371 3-302 (304)
7 3frx_A Guanine nucleotide-bind 100.0 1.1E-39 3.8E-44 293.9 35.9 295 8-371 7-317 (319)
8 4g56_B MGC81050 protein; prote 100.0 2E-39 6.7E-44 296.9 33.7 295 10-371 34-343 (357)
9 4ery_A WD repeat-containing pr 100.0 2.8E-38 9.5E-43 283.6 38.9 292 9-370 14-311 (312)
10 4aow_A Guanine nucleotide-bind 100.0 2.2E-38 7.5E-43 286.8 38.0 295 9-372 29-338 (340)
11 4gqb_B Methylosome protein 50; 100.0 4.2E-39 1.4E-43 293.0 32.9 290 15-371 27-331 (344)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.4E-39 1.8E-43 292.6 33.3 301 9-372 6-336 (345)
13 1erj_A Transcriptional repress 100.0 7.7E-39 2.6E-43 296.8 34.9 291 15-370 61-388 (393)
14 1nr0_A Actin interacting prote 100.0 6.6E-39 2.3E-43 313.8 32.1 343 8-369 180-609 (611)
15 2xzm_R RACK1; ribosome, transl 100.0 6.9E-38 2.4E-42 285.1 36.4 297 9-371 12-340 (343)
16 2hes_X YDR267CP; beta-propelle 100.0 1.6E-37 5.5E-42 281.2 36.4 304 7-371 3-328 (330)
17 1nr0_A Actin interacting prote 100.0 7.1E-38 2.4E-42 306.5 36.6 312 9-372 138-568 (611)
18 2pm7_B Protein transport prote 100.0 2.7E-37 9.3E-42 275.5 33.9 259 11-370 2-284 (297)
19 3zwl_B Eukaryotic translation 100.0 2.6E-36 8.9E-41 275.7 37.2 303 10-371 24-346 (369)
20 4h5i_A Guanine nucleotide-exch 100.0 4.4E-37 1.5E-41 282.1 31.4 299 18-370 14-342 (365)
21 2ymu_A WD-40 repeat protein; u 100.0 4.8E-36 1.6E-40 291.2 39.5 285 8-368 293-577 (577)
22 2ymu_A WD-40 repeat protein; u 100.0 1.3E-35 4.6E-40 288.0 38.0 301 9-371 7-334 (577)
23 3dm0_A Maltose-binding peripla 100.0 1.1E-35 3.8E-40 295.3 36.8 295 9-370 373-692 (694)
24 4ggc_A P55CDC, cell division c 100.0 5.8E-35 2E-39 261.8 37.7 298 4-373 7-317 (318)
25 1sq9_A Antiviral protein SKI8; 100.0 1.2E-35 4.2E-40 274.8 32.8 314 9-371 7-395 (397)
26 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-34 5E-39 258.4 38.6 294 3-372 2-297 (313)
27 3i2n_A WD repeat-containing pr 100.0 5.8E-35 2E-39 265.9 36.5 317 7-373 7-355 (357)
28 3bg1_A Protein SEC13 homolog; 100.0 5.4E-36 1.9E-40 269.5 27.1 257 12-370 7-292 (316)
29 3ei3_B DNA damage-binding prot 100.0 5.3E-35 1.8E-39 269.6 32.3 301 7-371 62-382 (383)
30 4e54_B DNA damage-binding prot 100.0 2E-35 6.7E-40 277.6 29.4 301 9-372 110-431 (435)
31 3k26_A Polycomb protein EED; W 100.0 7E-35 2.4E-39 266.1 32.2 299 12-370 12-365 (366)
32 4gga_A P55CDC, cell division c 100.0 6.8E-34 2.3E-38 265.8 38.5 294 7-372 90-396 (420)
33 2ynn_A Coatomer subunit beta'; 100.0 4.1E-34 1.4E-38 255.8 35.4 252 53-372 6-260 (304)
34 3gre_A Serine/threonine-protei 100.0 3.3E-35 1.1E-39 275.8 29.6 310 8-368 52-437 (437)
35 2pm9_A Protein WEB1, protein t 100.0 3.6E-35 1.2E-39 273.2 27.2 304 16-372 65-415 (416)
36 1gxr_A ESG1, transducin-like e 100.0 2.4E-33 8.3E-38 252.9 37.2 288 12-369 45-335 (337)
37 3mmy_A MRNA export factor; mRN 100.0 4.2E-34 1.4E-38 260.9 32.4 297 6-371 27-346 (368)
38 1r5m_A SIR4-interacting protei 100.0 1.2E-33 4.2E-38 262.9 35.2 297 16-370 106-424 (425)
39 4a11_B DNA excision repair pro 100.0 1.7E-33 5.8E-38 260.7 35.9 304 8-372 33-366 (408)
40 1k8k_C P40, ARP2/3 complex 41 100.0 5.7E-34 1.9E-38 261.0 30.0 291 13-370 3-360 (372)
41 3v7d_B Cell division control p 100.0 3.3E-33 1.1E-37 264.2 35.0 305 6-372 109-422 (464)
42 1vyh_C Platelet-activating fac 100.0 1.3E-33 4.5E-38 263.1 31.0 255 8-328 140-410 (410)
43 3jrp_A Fusion protein of prote 100.0 2.9E-33 1E-37 256.5 32.5 261 9-370 2-286 (379)
44 3f3f_A Nucleoporin SEH1; struc 100.0 8.7E-34 3E-38 256.3 28.0 319 9-372 2-338 (351)
45 4gqb_B Methylosome protein 50; 100.0 2.6E-33 8.8E-38 254.8 31.1 250 13-330 77-332 (344)
46 1r5m_A SIR4-interacting protei 100.0 6.1E-33 2.1E-37 258.2 34.2 300 10-370 35-360 (425)
47 3dwl_C Actin-related protein 2 100.0 3.8E-34 1.3E-38 263.1 25.3 296 11-369 4-377 (377)
48 2pm9_A Protein WEB1, protein t 100.0 6.9E-34 2.4E-38 264.5 27.3 295 17-372 11-338 (416)
49 4aez_A CDC20, WD repeat-contai 100.0 1.4E-32 4.8E-37 255.3 36.0 297 4-372 75-381 (401)
50 2j04_B YDR362CP, TAU91; beta p 100.0 2.9E-34 9.8E-39 274.3 24.7 297 12-373 201-519 (524)
51 1p22_A F-BOX/WD-repeat protein 100.0 1E-32 3.5E-37 259.0 33.2 280 9-372 124-415 (435)
52 3sfz_A APAF-1, apoptotic pepti 100.0 1.8E-32 6.2E-37 288.6 38.0 297 9-372 606-1035(1249)
53 3ow8_A WD repeat-containing pr 100.0 1.4E-32 4.7E-37 247.7 31.3 248 10-327 72-319 (321)
54 1yfq_A Cell cycle arrest prote 100.0 2E-33 6.7E-38 254.6 25.9 282 11-368 4-321 (342)
55 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.6E-32 1.9E-36 254.6 36.0 281 8-372 108-392 (445)
56 3vl1_A 26S proteasome regulato 100.0 3.1E-32 1.1E-36 253.9 33.7 299 14-372 94-420 (420)
57 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.2E-31 4.1E-36 252.4 37.3 283 7-371 148-442 (445)
58 3v7d_B Cell division control p 100.0 4.6E-32 1.6E-36 256.4 33.8 309 8-369 152-461 (464)
59 2oaj_A Protein SNI1; WD40 repe 100.0 2.6E-32 8.9E-37 277.3 32.8 346 15-372 55-606 (902)
60 1pgu_A Actin interacting prote 100.0 6.8E-33 2.3E-37 270.5 27.5 340 8-371 193-614 (615)
61 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-32 3.8E-37 280.0 29.9 345 13-369 146-659 (902)
62 1pgu_A Actin interacting prote 100.0 1.6E-31 5.5E-36 260.8 37.0 304 9-372 151-573 (615)
63 2j04_B YDR362CP, TAU91; beta p 100.0 5.9E-33 2E-37 265.2 24.1 266 8-371 124-428 (524)
64 3frx_A Guanine nucleotide-bind 100.0 1.5E-31 5.1E-36 240.8 30.6 259 9-330 56-318 (319)
65 3mkq_A Coatomer beta'-subunit; 100.0 6.1E-31 2.1E-35 265.3 37.7 294 9-371 4-302 (814)
66 3vl1_A 26S proteasome regulato 100.0 2.5E-32 8.6E-37 254.5 24.8 283 19-372 57-366 (420)
67 3vu4_A KMHSV2; beta-propeller 100.0 3.9E-31 1.3E-35 241.6 32.2 284 7-371 8-336 (355)
68 3sfz_A APAF-1, apoptotic pepti 100.0 3E-32 1E-36 286.9 28.4 352 8-372 647-1159(1249)
69 1got_B GT-beta; complex (GTP-b 100.0 2.1E-30 7.1E-35 235.4 35.2 250 52-372 47-302 (340)
70 1gxr_A ESG1, transducin-like e 100.0 2.3E-30 7.8E-35 233.4 35.1 288 17-372 8-297 (337)
71 4g56_B MGC81050 protein; prote 100.0 9.9E-32 3.4E-36 245.8 25.1 282 25-372 12-302 (357)
72 3iz6_a 40S ribosomal protein R 100.0 2.7E-31 9.1E-36 245.0 27.8 272 39-371 45-329 (380)
73 3jro_A Fusion protein of prote 100.0 1.3E-31 4.6E-36 268.0 27.3 260 11-371 2-285 (753)
74 3fm0_A Protein CIAO1; WDR39,SG 100.0 7E-30 2.4E-34 232.4 32.2 261 14-336 57-342 (345)
75 2hes_X YDR267CP; beta-propelle 100.0 3.1E-30 1.1E-34 233.3 29.6 259 10-329 48-328 (330)
76 1erj_A Transcriptional repress 100.0 9.1E-30 3.1E-34 235.8 33.3 248 20-329 125-389 (393)
77 3dw8_B Serine/threonine-protei 100.0 3.5E-31 1.2E-35 248.7 24.0 291 17-372 27-374 (447)
78 2xzm_R RACK1; ribosome, transl 100.0 5.2E-30 1.8E-34 233.0 30.8 266 9-330 67-341 (343)
79 2pbi_B Guanine nucleotide-bind 100.0 5.8E-29 2E-33 227.1 35.5 251 52-372 56-316 (354)
80 2w18_A PALB2, fancn, partner a 100.0 2.8E-29 9.7E-34 222.0 31.8 182 169-369 154-355 (356)
81 2xyi_A Probable histone-bindin 100.0 3.2E-29 1.1E-33 234.9 30.1 258 11-370 121-409 (430)
82 4ery_A WD repeat-containing pr 100.0 1.2E-28 4.2E-33 220.7 31.8 252 8-328 55-311 (312)
83 3lrv_A PRE-mRNA-splicing facto 100.0 1.9E-29 6.4E-34 229.3 24.2 240 26-370 44-291 (343)
84 4aow_A Guanine nucleotide-bind 100.0 5.3E-28 1.8E-32 218.5 31.9 259 9-332 77-340 (340)
85 3mkq_A Coatomer beta'-subunit; 100.0 3.5E-28 1.2E-32 245.2 33.2 296 8-370 45-385 (814)
86 4gga_A P55CDC, cell division c 100.0 3.7E-28 1.3E-32 226.9 29.7 266 13-345 142-411 (420)
87 3gre_A Serine/threonine-protei 100.0 2E-29 6.9E-34 236.4 20.2 304 5-372 4-360 (437)
88 3dm0_A Maltose-binding peripla 100.0 4.2E-28 1.5E-32 240.7 28.5 255 10-328 422-692 (694)
89 4gq1_A NUP37; propeller, trans 100.0 6.1E-29 2.1E-33 230.2 20.9 268 15-363 86-382 (393)
90 3i2n_A WD repeat-containing pr 100.0 5.2E-28 1.8E-32 219.9 26.5 266 14-332 61-356 (357)
91 2aq5_A Coronin-1A; WD40 repeat 100.0 2E-28 6.9E-33 227.2 23.4 254 9-371 72-342 (402)
92 4ggc_A P55CDC, cell division c 100.0 2.7E-27 9.1E-32 211.8 29.6 258 9-331 56-317 (318)
93 1sq9_A Antiviral protein SKI8; 100.0 5E-28 1.7E-32 223.6 25.1 272 9-331 53-397 (397)
94 2pm7_B Protein transport prote 100.0 1.4E-27 4.8E-32 212.5 26.4 229 9-328 44-284 (297)
95 2j04_A TAU60, YPL007P, hypothe 100.0 2.9E-28 9.9E-33 228.8 22.3 272 15-370 12-296 (588)
96 4aez_A CDC20, WD repeat-contai 100.0 1.1E-26 3.9E-31 215.4 32.6 259 9-336 124-387 (401)
97 3k26_A Polycomb protein EED; W 100.0 3.8E-28 1.3E-32 221.4 21.8 259 17-328 68-365 (366)
98 3vu4_A KMHSV2; beta-propeller 100.0 1.6E-27 5.6E-32 217.6 25.7 253 44-372 3-272 (355)
99 3bws_A Protein LP49; two-domai 100.0 1.3E-26 4.5E-31 216.8 31.9 288 9-370 114-431 (433)
100 1p22_A F-BOX/WD-repeat protein 100.0 2.5E-27 8.4E-32 222.3 26.8 266 8-349 163-433 (435)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.9E-26 9.9E-31 216.0 32.7 259 12-371 96-391 (450)
102 3bg1_A Protein SEC13 homolog; 100.0 1.5E-27 5E-32 214.4 22.6 233 10-328 49-292 (316)
103 3dwl_C Actin-related protein 2 100.0 1.1E-27 3.9E-32 219.9 22.2 243 63-370 12-280 (377)
104 1k8k_C P40, ARP2/3 complex 41 100.0 8.6E-27 2.9E-31 213.1 26.9 261 10-331 44-363 (372)
105 3ei3_B DNA damage-binding prot 100.0 5.7E-27 2E-31 215.8 25.3 256 50-372 63-340 (383)
106 3dw8_B Serine/threonine-protei 100.0 1.3E-26 4.6E-31 217.4 28.3 140 223-369 241-444 (447)
107 1l0q_A Surface layer protein; 100.0 7.1E-26 2.4E-30 208.9 32.0 268 31-372 3-276 (391)
108 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.6E-26 3.3E-30 212.4 31.0 189 162-369 115-337 (450)
109 4e54_B DNA damage-binding prot 100.0 2.1E-26 7.3E-31 216.0 25.3 250 63-372 120-388 (435)
110 3mmy_A MRNA export factor; mRN 99.9 1.6E-25 5.6E-30 203.9 28.8 252 11-327 79-344 (368)
111 4h5i_A Guanine nucleotide-exch 99.9 1.6E-25 5.4E-30 205.2 28.6 250 12-329 67-343 (365)
112 4a11_B DNA excision repair pro 99.9 3.2E-25 1.1E-29 204.9 30.9 294 15-369 96-403 (408)
113 3odt_A Protein DOA1; ubiquitin 99.9 6.8E-25 2.3E-29 195.5 31.5 243 51-372 9-256 (313)
114 2aq5_A Coronin-1A; WD40 repeat 99.9 3.2E-25 1.1E-29 205.7 30.0 250 20-372 36-300 (402)
115 3zwl_B Eukaryotic translation 99.9 8.9E-25 3E-29 199.1 32.5 248 55-372 27-305 (369)
116 1l0q_A Surface layer protein; 99.9 2.1E-24 7.2E-29 199.0 32.2 290 9-372 23-343 (391)
117 1yfq_A Cell cycle arrest prote 99.9 2.8E-25 9.4E-30 200.9 22.8 246 63-372 12-283 (342)
118 2j04_A TAU60, YPL007P, hypothe 99.9 1.3E-26 4.3E-31 217.8 13.7 258 16-359 83-349 (588)
119 3jrp_A Fusion protein of prote 99.9 1E-23 3.5E-28 192.9 27.8 148 223-372 71-241 (379)
120 2w18_A PALB2, fancn, partner a 99.9 1.3E-24 4.5E-29 192.3 20.1 97 224-327 253-355 (356)
121 3lrv_A PRE-mRNA-splicing facto 99.9 3.7E-24 1.3E-28 194.3 22.7 184 163-372 49-245 (343)
122 3f3f_A Nucleoporin SEH1; struc 99.9 6.2E-23 2.1E-27 184.9 28.5 280 9-336 48-344 (351)
123 2xyi_A Probable histone-bindin 99.9 1.5E-22 5.1E-27 189.5 27.2 220 8-329 171-410 (430)
124 1nir_A Nitrite reductase; hemo 99.9 7.8E-22 2.7E-26 189.6 32.1 308 8-372 169-515 (543)
125 4gq1_A NUP37; propeller, trans 99.9 5.5E-23 1.9E-27 190.2 22.2 202 163-373 102-350 (393)
126 1nir_A Nitrite reductase; hemo 99.9 7.4E-22 2.5E-26 189.7 29.0 291 25-372 144-459 (543)
127 3bws_A Protein LP49; two-domai 99.9 4E-21 1.4E-25 179.5 31.9 289 16-372 58-391 (433)
128 3jro_A Fusion protein of prote 99.9 5E-22 1.7E-26 198.7 26.3 148 223-372 69-239 (753)
129 1ri6_A Putative isomerase YBHE 99.9 2.7E-20 9.4E-25 167.8 29.6 273 32-370 7-307 (343)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.8E-20 6.2E-25 174.5 25.6 282 17-370 61-386 (415)
131 2ecf_A Dipeptidyl peptidase IV 99.9 4.7E-20 1.6E-24 184.2 28.8 294 18-370 36-412 (741)
132 3u4y_A Uncharacterized protein 99.9 6.2E-19 2.1E-23 158.5 29.9 283 24-372 3-305 (331)
133 2hqs_A Protein TOLB; TOLB, PAL 99.8 2.2E-19 7.7E-24 167.1 24.6 265 12-352 111-409 (415)
134 3vgz_A Uncharacterized protein 99.8 2.3E-17 7.9E-22 149.3 34.9 282 16-361 38-334 (353)
135 2ojh_A Uncharacterized protein 99.8 5.2E-19 1.8E-23 155.5 23.2 244 10-362 33-293 (297)
136 1k32_A Tricorn protease; prote 99.8 1.9E-18 6.3E-23 179.0 28.5 340 9-371 43-461 (1045)
137 3o4h_A Acylamino-acid-releasin 99.8 4.2E-19 1.4E-23 172.5 21.3 271 17-369 20-313 (582)
138 3hfq_A Uncharacterized protein 99.8 3.1E-17 1.1E-21 148.6 32.2 202 161-370 97-316 (347)
139 1pby_B Quinohemoprotein amine 99.8 8E-18 2.7E-22 151.2 27.7 272 31-372 2-311 (337)
140 1k32_A Tricorn protease; prote 99.8 8.7E-18 3E-22 173.9 28.7 295 10-370 195-501 (1045)
141 2z3z_A Dipeptidyl aminopeptida 99.8 6.8E-18 2.3E-22 167.6 26.4 304 3-370 12-390 (706)
142 1xfd_A DIP, dipeptidyl aminope 99.8 2.5E-18 8.4E-23 171.2 22.1 297 19-370 17-392 (723)
143 1ri6_A Putative isomerase YBHE 99.8 8.5E-17 2.9E-21 144.8 28.5 276 15-353 34-335 (343)
144 2oit_A Nucleoporin 214KDA; NH2 99.8 1.1E-17 3.7E-22 156.5 22.3 118 248-370 145-277 (434)
145 3scy_A Hypothetical bacterial 99.8 1.3E-15 4.4E-20 138.7 32.8 202 162-370 110-336 (361)
146 2ojh_A Uncharacterized protein 99.8 2.6E-16 8.9E-21 138.2 25.4 145 224-372 99-259 (297)
147 2ecf_A Dipeptidyl peptidase IV 99.8 1.1E-16 3.7E-21 159.8 25.2 295 20-369 110-457 (741)
148 2z3z_A Dipeptidyl aminopeptida 99.8 1.8E-16 6.2E-21 157.3 26.6 296 19-371 82-435 (706)
149 3scy_A Hypothetical bacterial 99.8 3.7E-15 1.3E-19 135.6 31.8 285 17-349 48-360 (361)
150 1jmx_B Amine dehydrogenase; ox 99.7 9.2E-16 3.1E-20 138.4 25.9 281 23-371 4-325 (349)
151 1pby_B Quinohemoprotein amine 99.7 1.7E-15 5.8E-20 135.9 26.6 269 9-340 22-321 (337)
152 3u4y_A Uncharacterized protein 99.7 2.8E-15 9.6E-20 134.5 28.0 190 162-371 52-252 (331)
153 1jof_A Carboxy-CIS,CIS-muconat 99.7 3.2E-15 1.1E-19 136.5 28.5 142 229-370 165-340 (365)
154 2oit_A Nucleoporin 214KDA; NH2 99.7 3.1E-17 1E-21 153.4 14.4 147 223-370 50-222 (434)
155 3pe7_A Oligogalacturonate lyas 99.7 1.8E-16 6.2E-21 145.6 19.3 317 6-372 18-383 (388)
156 3vgz_A Uncharacterized protein 99.7 1.2E-14 4.2E-19 131.3 27.5 198 162-371 101-303 (353)
157 3hfq_A Uncharacterized protein 99.7 2.4E-14 8.1E-19 129.5 28.3 268 14-333 35-323 (347)
158 1xfd_A DIP, dipeptidyl aminope 99.7 3.6E-15 1.2E-19 148.3 23.9 317 9-358 48-427 (723)
159 1z68_A Fibroblast activation p 99.7 7.9E-16 2.7E-20 153.1 19.1 291 22-370 19-390 (719)
160 3o4h_A Acylamino-acid-releasin 99.7 9.9E-16 3.4E-20 148.7 18.5 136 224-369 125-274 (582)
161 2oiz_A Aromatic amine dehydrog 99.7 5E-14 1.7E-18 128.4 27.0 279 29-372 14-335 (361)
162 1q7f_A NHL, brain tumor CG1071 99.7 2E-13 6.8E-18 120.0 29.6 139 224-371 135-280 (286)
163 3fvz_A Peptidyl-glycine alpha- 99.6 1E-12 3.5E-17 118.1 27.9 115 253-370 196-321 (329)
164 3c5m_A Oligogalacturonate lyas 99.6 9.2E-14 3.2E-18 127.6 21.4 310 6-370 18-381 (396)
165 2oiz_A Aromatic amine dehydrog 99.6 1.1E-12 3.7E-17 119.6 27.7 277 9-353 42-360 (361)
166 1jmx_B Amine dehydrogenase; ox 99.6 2.1E-12 7.2E-17 116.2 28.7 266 9-339 32-335 (349)
167 4a5s_A Dipeptidyl peptidase 4 99.6 1.4E-14 4.8E-19 144.6 15.4 284 17-370 15-352 (740)
168 3azo_A Aminopeptidase; POP fam 99.5 2.3E-12 8E-17 126.7 25.3 290 12-369 17-365 (662)
169 1z68_A Fibroblast activation p 99.5 9.6E-13 3.3E-17 130.8 22.2 314 9-371 47-443 (719)
170 3e5z_A Putative gluconolactona 99.5 1.6E-11 5.3E-16 108.4 27.3 262 9-366 18-282 (296)
171 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.9E-11 6.6E-16 111.3 25.4 141 229-370 117-290 (365)
172 2xdw_A Prolyl endopeptidase; a 99.4 2.9E-11 1E-15 120.0 25.7 139 230-372 258-415 (710)
173 2dg1_A DRP35, lactonase; beta 99.4 1.6E-09 5.5E-14 97.0 31.1 245 9-361 35-300 (333)
174 2bkl_A Prolyl endopeptidase; m 99.4 2.5E-11 8.4E-16 120.3 20.1 122 246-372 265-398 (695)
175 1rwi_B Serine/threonine-protei 99.4 4.7E-10 1.6E-14 97.2 24.8 141 227-372 125-265 (270)
176 2gop_A Trilobed protease; beta 99.4 3.2E-10 1.1E-14 102.1 24.4 162 172-370 152-330 (347)
177 1qks_A Cytochrome CD1 nitrite 99.3 3.3E-09 1.1E-13 101.8 32.0 286 28-371 165-477 (567)
178 2z2n_A Virginiamycin B lyase; 99.3 2E-08 6.7E-13 88.0 34.0 284 13-369 9-293 (299)
179 4a5s_A Dipeptidyl peptidase 4 99.3 1.5E-10 5E-15 115.6 18.8 183 171-371 35-294 (740)
180 3dsm_A Uncharacterized protein 99.3 3.1E-09 1.1E-13 95.2 25.3 265 37-370 14-301 (328)
181 3no2_A Uncharacterized protein 99.3 4.5E-09 1.5E-13 91.7 25.5 100 254-359 126-231 (276)
182 3sjl_D Methylamine dehydrogena 99.2 4.6E-09 1.6E-13 95.1 25.2 283 23-371 37-363 (386)
183 2dg1_A DRP35, lactonase; beta 99.2 5E-09 1.7E-13 93.7 24.5 134 231-369 112-261 (333)
184 3azo_A Aminopeptidase; POP fam 99.2 9.3E-10 3.2E-14 108.2 21.2 294 10-371 59-411 (662)
185 2mad_H Methylamine dehydrogena 99.2 8.7E-08 3E-12 87.3 32.3 282 25-372 27-351 (373)
186 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 4.1E-08 1.4E-12 86.8 29.2 119 252-371 171-299 (314)
187 1q7f_A NHL, brain tumor CG1071 99.2 8.1E-09 2.8E-13 90.3 24.2 190 164-370 43-237 (286)
188 3dsm_A Uncharacterized protein 99.2 6.9E-09 2.3E-13 93.0 23.5 258 20-348 45-319 (328)
189 1qks_A Cytochrome CD1 nitrite 99.2 1.6E-07 5.6E-12 90.1 34.4 307 10-371 189-538 (567)
190 1yr2_A Prolyl oligopeptidase; 99.2 5.2E-09 1.8E-13 104.3 25.0 137 231-371 294-441 (741)
191 3fvz_A Peptidyl-glycine alpha- 99.2 2.9E-09 1E-13 95.4 19.6 181 172-371 69-277 (329)
192 3pe7_A Oligogalacturonate lyas 99.2 4.2E-09 1.4E-13 96.2 20.8 189 160-372 46-274 (388)
193 3hrp_A Uncharacterized protein 99.1 2.5E-07 8.7E-12 85.3 30.8 141 224-369 233-408 (409)
194 3no2_A Uncharacterized protein 99.1 1.8E-08 6.1E-13 87.9 21.0 185 163-372 6-196 (276)
195 2qc5_A Streptogramin B lactona 99.1 2.5E-07 8.7E-12 80.8 28.7 280 16-368 17-297 (300)
196 3iuj_A Prolyl endopeptidase; h 99.0 4.4E-08 1.5E-12 96.9 21.5 93 274-371 305-405 (693)
197 3g4e_A Regucalcin; six bladed 99.0 2.9E-06 9.9E-11 74.5 31.2 108 252-359 148-261 (297)
198 3c75_H MADH, methylamine dehyd 99.0 1.4E-07 4.9E-12 86.8 22.8 280 28-371 82-402 (426)
199 3e5z_A Putative gluconolactona 99.0 1.4E-08 4.8E-13 89.3 15.2 143 223-370 42-201 (296)
200 3c5m_A Oligogalacturonate lyas 99.0 1.3E-08 4.4E-13 93.0 15.2 143 223-372 94-274 (396)
201 3sjl_D Methylamine dehydrogena 98.9 1.8E-06 6.2E-11 78.2 26.6 272 11-351 72-384 (386)
202 3dr2_A Exported gluconolactona 98.9 2.1E-06 7.1E-11 75.8 26.3 110 251-366 186-302 (305)
203 2qe8_A Uncharacterized protein 98.9 2.7E-07 9.1E-12 83.1 20.3 280 13-364 11-314 (343)
204 1xip_A Nucleoporin NUP159; bet 98.9 9.2E-08 3.1E-12 86.9 17.1 121 223-357 99-230 (388)
205 1xip_A Nucleoporin NUP159; bet 98.9 4E-08 1.4E-12 89.3 14.5 129 223-369 51-189 (388)
206 2xdw_A Prolyl endopeptidase; a 98.8 2.4E-07 8.4E-12 91.8 21.0 188 160-369 135-364 (710)
207 1rwi_B Serine/threonine-protei 98.8 7.4E-07 2.5E-11 76.8 21.2 141 224-370 80-221 (270)
208 2bkl_A Prolyl endopeptidase; m 98.8 4.7E-07 1.6E-11 89.5 21.8 179 167-370 142-348 (695)
209 2z2n_A Virginiamycin B lyase; 98.8 5.4E-06 1.8E-10 72.2 26.3 141 223-369 112-253 (299)
210 1yiq_A Quinohemoprotein alcoho 98.8 3.7E-06 1.3E-10 82.8 27.4 54 319-373 454-507 (689)
211 2gop_A Trilobed protease; beta 98.8 2.1E-07 7.2E-12 83.5 16.9 123 231-370 152-290 (347)
212 1kb0_A Quinohemoprotein alcoho 98.8 2.7E-06 9.3E-11 83.6 24.9 52 320-372 457-508 (677)
213 2ghs_A AGR_C_1268P; regucalcin 98.8 3.4E-05 1.2E-09 68.6 30.0 107 253-361 179-293 (326)
214 1mda_H Methylamine dehydrogena 98.7 1.3E-06 4.4E-11 79.0 19.8 267 32-371 34-346 (368)
215 2hz6_A Endoplasmic reticulum t 98.7 3.5E-08 1.2E-12 89.8 9.6 63 29-97 8-70 (369)
216 2mad_H Methylamine dehydrogena 98.7 5.2E-05 1.8E-09 68.9 30.6 259 10-336 59-357 (373)
217 1kb0_A Quinohemoprotein alcoho 98.7 1.1E-05 3.6E-10 79.4 26.8 79 274-357 457-537 (677)
218 1yiq_A Quinohemoprotein alcoho 98.7 4.8E-06 1.6E-10 82.0 24.1 82 273-359 454-537 (689)
219 2hz6_A Endoplasmic reticulum t 98.7 1.1E-08 3.7E-13 93.2 4.1 177 165-372 12-193 (369)
220 3hrp_A Uncharacterized protein 98.6 6.9E-06 2.4E-10 75.7 22.5 183 164-370 144-353 (409)
221 1yr2_A Prolyl oligopeptidase; 98.6 7.1E-06 2.4E-10 81.7 22.9 134 232-370 244-392 (741)
222 2qc5_A Streptogramin B lactona 98.6 0.00015 5.3E-09 62.8 28.8 141 223-369 117-258 (300)
223 3q7m_A Lipoprotein YFGL, BAMB; 98.6 0.00024 8.2E-09 64.3 30.6 268 29-372 52-338 (376)
224 3g4e_A Regucalcin; six bladed 98.5 3.8E-05 1.3E-09 67.3 23.2 182 163-371 26-229 (297)
225 3q7m_A Lipoprotein YFGL, BAMB; 98.5 0.0001 3.5E-09 66.7 26.8 274 29-368 102-375 (376)
226 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 3.3E-05 1.1E-09 67.8 20.9 138 224-370 85-255 (314)
227 3c75_H MADH, methylamine dehyd 98.4 0.00022 7.7E-09 65.5 26.1 248 23-336 122-409 (426)
228 1mda_H Methylamine dehydrogena 98.3 8.3E-05 2.8E-09 67.1 20.7 264 9-350 57-366 (368)
229 3iuj_A Prolyl endopeptidase; h 98.3 6.1E-05 2.1E-09 74.3 21.0 134 231-370 208-358 (693)
230 3dr2_A Exported gluconolactona 98.3 1.8E-05 6.1E-10 69.7 15.6 141 223-370 59-223 (305)
231 3hxj_A Pyrrolo-quinoline quino 98.3 0.0003 1E-08 62.1 23.3 171 168-370 153-323 (330)
232 2ghs_A AGR_C_1268P; regucalcin 98.2 6E-05 2E-09 67.0 16.6 140 223-370 63-209 (326)
233 2ece_A 462AA long hypothetical 98.2 0.0018 6E-08 59.4 26.1 128 229-359 226-399 (462)
234 2iwa_A Glutamine cyclotransfer 98.1 0.0013 4.6E-08 56.2 22.9 185 162-370 33-236 (266)
235 1kv9_A Type II quinohemoprotei 98.1 0.0024 8E-08 62.6 26.5 54 318-372 436-489 (668)
236 2ece_A 462AA long hypothetical 98.1 0.00099 3.4E-08 61.1 21.7 198 159-372 93-353 (462)
237 1k3i_A Galactose oxidase precu 98.1 0.001 3.5E-08 65.1 23.3 57 303-360 460-530 (656)
238 3nol_A Glutamine cyclotransfer 98.0 0.002 7E-08 54.6 20.9 164 172-359 65-243 (262)
239 1fwx_A Nitrous oxide reductase 98.0 0.00032 1.1E-08 66.5 16.8 69 301-370 279-360 (595)
240 3hxj_A Pyrrolo-quinoline quino 98.0 0.0021 7.3E-08 56.5 21.7 134 223-369 149-282 (330)
241 2ad6_A Methanol dehydrogenase 97.9 0.013 4.5E-07 56.2 28.4 53 319-372 443-495 (571)
242 2qe8_A Uncharacterized protein 97.9 0.00028 9.4E-09 63.2 15.4 117 250-369 64-222 (343)
243 3nok_A Glutaminyl cyclase; bet 97.9 0.0015 5E-08 55.5 17.6 171 163-358 66-253 (268)
244 2ad6_A Methanol dehydrogenase 97.9 0.019 6.6E-07 55.0 27.8 80 272-356 442-522 (571)
245 1kv9_A Type II quinohemoprotei 97.8 0.0082 2.8E-07 58.8 25.0 82 273-359 437-520 (668)
246 2iwa_A Glutamine cyclotransfer 97.8 0.0073 2.5E-07 51.6 21.3 103 224-330 119-238 (266)
247 1flg_A Protein (quinoprotein e 97.8 0.018 6.3E-07 55.3 26.1 81 273-358 465-547 (582)
248 1fwx_A Nitrous oxide reductase 97.7 0.0021 7.1E-08 61.0 17.9 131 231-363 254-413 (595)
249 1w6s_A Methanol dehydrogenase 97.6 0.065 2.2E-06 51.5 29.5 82 272-358 451-534 (599)
250 3mbr_X Glutamine cyclotransfer 97.5 0.029 9.9E-07 47.0 23.1 164 172-359 43-222 (243)
251 1w6s_A Methanol dehydrogenase 97.4 0.094 3.2E-06 50.4 27.5 55 318-373 451-505 (599)
252 1flg_A Protein (quinoprotein e 97.4 0.096 3.3E-06 50.2 28.7 54 319-373 465-518 (582)
253 2p4o_A Hypothetical protein; p 97.3 0.071 2.4E-06 46.4 27.5 96 261-359 175-276 (306)
254 1npe_A Nidogen, entactin; glyc 97.2 0.079 2.7E-06 44.9 21.6 142 223-370 50-197 (267)
255 2fp8_A Strictosidine synthase; 97.0 0.037 1.3E-06 48.5 16.9 142 224-370 33-215 (322)
256 3tc9_A Hypothetical hydrolase; 96.9 0.083 2.8E-06 48.6 18.9 141 223-370 151-300 (430)
257 3sre_A PON1, serum paraoxonase 96.9 0.092 3.2E-06 46.8 17.8 141 229-370 81-251 (355)
258 3nok_A Glutaminyl cyclase; bet 96.8 0.13 4.3E-06 43.7 17.6 138 223-371 67-210 (268)
259 2fp8_A Strictosidine synthase; 96.8 0.23 7.7E-06 43.4 24.5 111 254-370 186-312 (322)
260 1k3i_A Galactose oxidase precu 96.8 0.45 1.5E-05 46.3 24.3 71 23-96 247-324 (656)
261 1ijq_A LDL receptor, low-densi 96.7 0.27 9.3E-06 42.9 21.2 143 223-370 44-194 (316)
262 3nol_A Glutamine cyclotransfer 96.6 0.11 3.8E-06 43.9 15.6 139 223-371 55-201 (262)
263 4a2l_A BT_4663, two-component 96.5 0.8 2.7E-05 45.6 31.9 138 223-369 369-524 (795)
264 3amr_A 3-phytase; beta-propell 96.4 0.41 1.4E-05 42.3 18.5 140 223-369 42-206 (355)
265 2xe4_A Oligopeptidase B; hydro 96.4 0.093 3.2E-06 52.1 15.9 132 232-367 202-348 (751)
266 2xe4_A Oligopeptidase B; hydro 96.2 0.02 6.9E-07 56.9 10.4 113 254-372 175-305 (751)
267 2p9w_A MAL S 1 allergenic prot 96.2 0.56 1.9E-05 41.1 22.1 137 230-368 99-262 (334)
268 3sov_A LRP-6, low-density lipo 96.1 0.5 1.7E-05 41.4 17.5 142 224-370 50-196 (318)
269 3v65_B Low-density lipoprotein 96.1 0.68 2.3E-05 41.7 18.8 142 224-370 131-276 (386)
270 4a2l_A BT_4663, two-component 96.0 1.5 5E-05 43.6 32.8 139 223-369 322-478 (795)
271 3v64_C Agrin; beta propeller, 95.9 0.45 1.5E-05 42.2 16.7 141 224-370 88-233 (349)
272 3amr_A 3-phytase; beta-propell 95.7 1 3.5E-05 39.8 25.7 192 165-372 43-264 (355)
273 3p5b_L Low density lipoprotein 95.7 1.1 3.8E-05 40.5 18.6 140 228-369 89-232 (400)
274 3p5b_L Low density lipoprotein 95.7 1.2 4.1E-05 40.3 21.4 143 224-370 127-276 (400)
275 4hw6_A Hypothetical protein, I 95.6 0.41 1.4E-05 44.0 15.6 140 224-370 155-303 (433)
276 2p9w_A MAL S 1 allergenic prot 95.5 0.5 1.7E-05 41.4 14.7 145 225-372 29-216 (334)
277 3mbr_X Glutamine cyclotransfer 95.4 1 3.5E-05 37.6 17.9 138 224-371 34-179 (243)
278 1ijq_A LDL receptor, low-densi 95.3 1.3 4.6E-05 38.4 19.1 135 230-369 9-150 (316)
279 3qqz_A Putative uncharacterize 95.2 1.2 4E-05 37.6 21.2 185 164-367 41-249 (255)
280 2ism_A Putative oxidoreductase 94.9 0.57 1.9E-05 41.6 13.9 102 253-359 31-153 (352)
281 3m0c_C LDL receptor, low-densi 94.8 2.2 7.5E-05 42.4 18.9 141 227-369 400-544 (791)
282 3qqz_A Putative uncharacterize 94.6 1.7 5.9E-05 36.5 16.4 118 248-369 22-149 (255)
283 2p4o_A Hypothetical protein; p 94.6 1.9 6.4E-05 37.2 16.3 110 254-369 33-145 (306)
284 1npe_A Nidogen, entactin; glyc 94.6 1.7 5.9E-05 36.4 27.0 142 223-371 93-238 (267)
285 3m0c_C LDL receptor, low-densi 94.6 2.4 8.3E-05 42.1 18.5 142 224-369 439-587 (791)
286 4hw6_A Hypothetical protein, I 94.5 1.9 6.6E-05 39.4 16.6 143 226-370 245-432 (433)
287 3v64_C Agrin; beta propeller, 94.1 2.9 9.9E-05 36.9 28.2 112 252-368 158-272 (349)
288 3pbp_A Nucleoporin NUP82; beta 93.9 1.3 4.5E-05 40.1 13.7 71 300-371 67-158 (452)
289 1n7d_A LDL receptor, low-densi 93.9 0.32 1.1E-05 47.8 10.7 141 225-370 422-570 (699)
290 3v65_B Low-density lipoprotein 93.8 3.6 0.00012 36.9 23.7 140 223-368 173-315 (386)
291 3a9g_A Putative uncharacterize 93.7 1.2 4.1E-05 39.6 13.2 102 253-359 29-153 (354)
292 3tc9_A Hypothetical hydrolase; 93.7 2.7 9.4E-05 38.3 16.0 144 224-370 241-429 (430)
293 3pbp_A Nucleoporin NUP82; beta 92.8 5.6 0.00019 36.1 17.6 135 229-366 39-207 (452)
294 3kya_A Putative phosphatase; s 92.6 6.6 0.00023 36.5 17.3 139 224-369 154-339 (496)
295 3a9g_A Putative uncharacterize 92.5 3 0.0001 36.9 13.9 132 224-358 42-215 (354)
296 3sov_A LRP-6, low-density lipo 92.4 5.1 0.00017 34.8 19.4 141 224-370 94-237 (318)
297 1cru_A Protein (soluble quinop 91.8 5.3 0.00018 36.7 15.1 105 254-360 28-163 (454)
298 3s94_A LRP-6, low-density lipo 91.6 10 0.00034 36.5 18.7 141 225-370 56-201 (619)
299 1n7d_A LDL receptor, low-densi 91.3 3.1 0.0001 40.8 13.6 140 224-369 468-612 (699)
300 3s94_A LRP-6, low-density lipo 91.0 9.3 0.00032 36.7 16.4 128 226-357 13-143 (619)
301 3v9f_A Two-component system se 90.8 14 0.00046 36.5 29.6 139 223-369 375-522 (781)
302 1tl2_A L10, protein (tachylect 89.6 3.2 0.00011 34.1 9.9 104 253-364 41-156 (236)
303 3das_A Putative oxidoreductase 89.6 10 0.00035 33.4 14.2 105 253-359 32-158 (347)
304 3v9f_A Two-component system se 89.2 18 0.00062 35.6 30.5 138 223-369 325-476 (781)
305 3kya_A Putative phosphatase; s 88.1 17 0.00057 33.8 17.9 148 223-372 261-476 (496)
306 2g8s_A Glucose/sorbosone dehyd 88.0 5.6 0.00019 35.1 11.6 107 254-360 19-149 (353)
307 2g8s_A Glucose/sorbosone dehyd 87.9 12 0.0004 33.0 13.7 133 224-357 32-214 (353)
308 1cru_A Protein (soluble quinop 87.8 16 0.00056 33.4 17.8 119 252-371 76-259 (454)
309 2wg3_C Hedgehog-interacting pr 87.7 14 0.00048 34.0 14.4 109 254-362 15-160 (463)
310 4a0p_A LRP6, LRP-6, low-densit 87.6 21 0.00071 34.4 17.6 137 228-368 12-152 (628)
311 3sre_A PON1, serum paraoxonase 87.5 15 0.0005 32.5 18.8 126 230-361 138-287 (355)
312 3das_A Putative oxidoreductase 86.9 16 0.00053 32.2 14.7 137 224-362 45-224 (347)
313 2xbg_A YCF48-like protein; pho 86.4 16 0.00053 31.7 17.7 108 251-364 161-272 (327)
314 3ei3_A DNA damage-binding prot 83.8 44 0.0015 34.7 17.2 111 254-370 515-635 (1158)
315 3ei3_A DNA damage-binding prot 83.6 45 0.0015 34.7 21.0 132 230-371 863-999 (1158)
316 1tl2_A L10, protein (tachylect 83.4 12 0.00042 30.6 10.2 110 255-372 90-209 (236)
317 2ism_A Putative oxidoreductase 81.6 8.7 0.0003 33.8 9.8 67 300-369 32-112 (352)
318 4a0p_A LRP6, LRP-6, low-densit 76.2 56 0.0019 31.3 24.0 141 224-370 52-196 (628)
319 2xbg_A YCF48-like protein; pho 75.9 38 0.0013 29.1 18.1 110 251-368 203-319 (327)
320 3sbq_A Nitrous-oxide reductase 73.6 49 0.0017 31.3 12.2 102 255-358 325-452 (638)
321 2vpj_A Kelch-like protein 12; 73.1 41 0.0014 28.2 14.8 101 265-370 161-277 (301)
322 2xzh_A Clathrin heavy chain 1; 70.9 54 0.0018 28.7 25.0 182 162-365 79-326 (365)
323 4gq2_M Nucleoporin NUP120; bet 70.3 5.1 0.00018 40.7 5.5 37 20-56 237-273 (950)
324 2vpj_A Kelch-like protein 12; 68.8 51 0.0017 27.6 15.6 101 265-370 114-230 (301)
325 2xn4_A Kelch-like protein 2; s 64.5 62 0.0021 27.1 12.8 92 274-370 173-275 (302)
326 4fhn_B Nucleoporin NUP120; pro 64.1 6 0.0002 41.2 4.7 36 20-55 239-274 (1139)
327 4gq2_M Nucleoporin NUP120; bet 63.6 11 0.00038 38.3 6.4 37 300-336 237-273 (950)
328 3sbq_A Nitrous-oxide reductase 63.3 15 0.00051 34.7 6.5 67 303-370 327-407 (638)
329 1bpo_A Protein (clathrin); cla 62.7 93 0.0032 28.5 24.8 183 162-366 78-326 (494)
330 3ii7_A Kelch-like protein 7; p 62.0 37 0.0013 28.6 8.8 94 273-370 23-126 (306)
331 3zwu_A Alkaline phosphatase PH 60.7 32 0.0011 32.7 8.6 58 301-358 478-548 (592)
332 1zgk_A Kelch-like ECH-associat 59.9 78 0.0027 26.6 12.3 100 265-370 170-286 (308)
333 2uvk_A YJHT; unknown function, 58.4 49 0.0017 28.6 9.2 87 274-362 217-327 (357)
334 3f7f_A Nucleoporin NUP120; nuc 57.5 12 0.00042 36.4 5.1 36 19-56 222-257 (729)
335 4asc_A Kelch repeat and BTB do 55.2 94 0.0032 26.2 13.4 61 309-370 98-173 (315)
336 1zgk_A Kelch-like ECH-associat 54.4 96 0.0033 26.0 11.7 90 274-370 137-239 (308)
337 3ii7_A Kelch-like protein 7; p 53.3 99 0.0034 25.8 14.8 96 230-331 23-129 (306)
338 4fhn_B Nucleoporin NUP120; pro 52.7 12 0.0004 39.0 4.5 36 301-336 240-275 (1139)
339 4a9v_A PHOX; hydrolase, beta-p 51.1 66 0.0022 30.4 8.8 58 301-358 478-548 (592)
340 3f7f_A Nucleoporin NUP120; nuc 50.8 29 0.001 33.8 6.5 29 309-337 230-258 (729)
341 2woz_A Kelch repeat and BTB do 49.2 1.2E+02 0.0041 25.5 13.5 61 309-370 109-183 (318)
342 2xn4_A Kelch-like protein 2; s 47.2 1.2E+02 0.0042 25.1 14.1 100 265-370 110-228 (302)
343 2be1_A Serine/threonine-protei 46.9 54 0.0018 28.7 7.2 112 223-337 12-138 (339)
344 4asc_A Kelch repeat and BTB do 46.6 1.3E+02 0.0044 25.2 12.4 83 274-361 165-253 (315)
345 2uvk_A YJHT; unknown function, 46.2 1.1E+02 0.0037 26.3 9.3 85 274-361 31-128 (357)
346 1xi4_A Clathrin heavy chain; a 43.0 3.5E+02 0.012 29.1 16.9 33 303-335 263-295 (1630)
347 2be1_A Serine/threonine-protei 33.6 92 0.0032 27.1 6.6 28 312-339 12-39 (339)
348 2zwa_A Leucine carboxyl methyl 32.9 2.5E+02 0.0086 27.1 10.3 103 264-370 452-576 (695)
349 2woz_A Kelch repeat and BTB do 31.5 2.3E+02 0.0078 23.7 12.6 83 274-361 175-263 (318)
350 2zwa_A Leucine carboxyl methyl 30.7 3.7E+02 0.013 25.9 12.3 106 263-370 500-634 (695)
351 3s25_A Hypothetical 7-bladed b 29.1 2.6E+02 0.0089 23.6 10.9 121 234-370 38-175 (302)
No 1
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.6e-43 Score=321.85 Aligned_cols=296 Identities=19% Similarity=0.283 Sum_probs=229.1
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
.++..+|+||.++|++++|+|++++|+||+.|++|++||..+++.+..+..|. ..+.++++++ +++.+++|+.|++
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~--~~v~~~~~s~--~~~~l~s~~~d~~ 120 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRS--SWVMTCAYAP--SGNYVACGGLDNI 120 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSS--SCEEEEEECT--TSSEEEEEETTCE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCC--ccEEEEEECC--CCCEEEEEeCCCe
Confidence 46778999999999999999999999999999999999999988887777665 3478888887 5689999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
+++||+.++.... ........|.. ...+.. +.+ +. .+++
T Consensus 121 v~iw~~~~~~~~~---~~~~~~~~h~~-----------------~v~~~~------------------~~~-~~--~l~s 159 (340)
T 1got_B 121 CSIYNLKTREGNV---RVSRELAGHTG-----------------YLSCCR------------------FLD-DN--QIVT 159 (340)
T ss_dssp EEEEETTTCSBSC---EEEEEEECCSS-----------------CEEEEE------------------EEE-TT--EEEE
T ss_pred EEEEECccCCCcc---eeEEEecCCCc-----------------cEEEEE------------------ECC-CC--cEEE
Confidence 9999997653110 00000000000 000000 001 11 2556
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
++.|++|++||+++++.+..+..+. ....++ .+.++ ...+++|+.||+|++||+++ ......
T Consensus 160 ~s~d~~i~~wd~~~~~~~~~~~~h~----------~~v~~~---~~~~~----~~~l~sg~~d~~v~~wd~~~-~~~~~~ 221 (340)
T 1got_B 160 SSGDTTCALWDIETGQQTTTFTGHT----------GDVMSL---SLAPD----TRLFVSGACDASAKLWDVRE-GMCRQT 221 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCS----------SCEEEE---EECTT----SSEEEEEETTSCEEEEETTT-CSEEEE
T ss_pred EECCCcEEEEECCCCcEEEEEcCCC----------CceEEE---EECCC----CCEEEEEeCCCcEEEEECCC-CeeEEE
Confidence 7789999999999998877765321 111221 23332 23689999999999999986 456778
Q ss_pred eecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEc
Q 017296 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 327 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~ 327 (374)
+.+|..+|.+++|+|++..+++++.|++|++||++.. ..........+...+.+++|+|++++|++|+.|++|++||+
T Consensus 222 ~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~--~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~ 299 (340)
T 1got_B 222 FTGHESDINAICFFPNGNAFATGSDDATCRLFDLRAD--QELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDA 299 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCC--cEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEc
Confidence 8999999999999999999999999999999999753 22222221222346999999999999999999999999999
Q ss_pred cCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 328 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 328 ~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
.+++.+..+.+|.+.|.+++|+|+|++|||||.|++|+|||
T Consensus 300 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 300 LKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred ccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999999997
No 2
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2e-44 Score=332.89 Aligned_cols=317 Identities=14% Similarity=0.211 Sum_probs=233.5
Q ss_pred CCCCCCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeecc
Q 017296 4 RPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (374)
Q Consensus 4 ~~~~~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (374)
.|....+..+|+||.++|++++|+|++++|+|||.|++|+|||..+++.+..+..|.. .+.+++|++ +++.+++|+
T Consensus 52 ~~~~~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~--~v~~~~~s~--~g~~las~~ 127 (380)
T 3iz6_a 52 NPTDLVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCP--WVMECAFAP--NGQSVACGG 127 (380)
T ss_dssp CCCCCEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCT--TCCCCEECT--TSSEEEECC
T ss_pred ccceeEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCC--CEEEEEECC--CCCEEEEee
Confidence 3555667889999999999999999999999999999999999999988888877754 477888887 678999999
Q ss_pred ccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCce
Q 017296 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (374)
Q Consensus 84 ~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (374)
.|+++++||+.++...............| . +.+. ...+.+.+ ..
T Consensus 128 ~d~~v~iw~~~~~~~~~~~~~~~~~~~gh----------~-----------------~~v~--------~~~~~~~~-~~ 171 (380)
T 3iz6_a 128 LDSACSIFNLSSQADRDGNMPVSRVLTGH----------K-----------------GYAS--------SCQYVPDQ-ET 171 (380)
T ss_dssp SSSCCEEEECCCCSSCCCSSTTCCBCCCC----------S-----------------SCCC--------CCBCCSSS-SS
T ss_pred CCCcEEEEECCCCccccCCccceeeccCC----------C-----------------cceE--------EEEEecCC-CC
Confidence 99999999997642110000000000000 0 0000 00011111 22
Q ss_pred EEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC
Q 017296 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (374)
Q Consensus 164 ~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~ 243 (374)
.+++|+.|++|++||+++++.+..+..... .++ .....++ .+.+ .+...+++|+.||+|++||++....
T Consensus 172 ~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~---~~h--~~~v~~~---~~~~---~~~~~l~sgs~D~~v~~wd~~~~~~ 240 (380)
T 3iz6_a 172 RLITGSGDQTCVLWDVTTGQRISIFGSEFP---SGH--TADVLSL---SINS---LNANMFISGSCDTTVRLWDLRITSR 240 (380)
T ss_dssp CEEEECTTSCEEEECTTTCCEEEEECCCSS---SSC--CSCEEEE---EECS---SSCCEEEEEETTSCEEEEETTTTCC
T ss_pred EEEEECCCCcEEEEEcCCCcEEEEeecccC---CCC--ccCeEEE---Eeec---CCCCEEEEEECCCeEEEEECCCCCc
Confidence 366788899999999999987766532110 011 1111111 1221 1233689999999999999986566
Q ss_pred ceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee---ecCCCCeEEEEECCCCCEEEEEeCCC
Q 017296 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI---NLERPGISGTSIRPDSKIAATAGWDR 320 (374)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~s~~~dg 320 (374)
.+..+.+|..+|.+++|+|++..+++++.|++|++||++.......+.... ..+...+.+++|+|++++|++|+.||
T Consensus 241 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg 320 (380)
T 3iz6_a 241 AVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG 320 (380)
T ss_dssp CCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS
T ss_pred ceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC
Confidence 778889999999999999999999999999999999997542211111110 11123488999999999999999999
Q ss_pred eEEEEEccCCeEEEEe----cccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 321 RVRIYNYRKGSALAIL----KYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 321 ~v~iwd~~~~~~~~~~----~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
.|++||+..++.+..+ .+|.+.|.+++|+|||++|+|||.|++|++|++..
T Consensus 321 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 321 DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCS
T ss_pred CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCC
Confidence 9999999998887776 68999999999999999999999999999999864
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2e-43 Score=329.50 Aligned_cols=291 Identities=17% Similarity=0.273 Sum_probs=230.1
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
.+...+.||.++|++++|+|++.+|+||+.|++|+|||..+++....+.+|.. .+.+++|++ +++.|++|+.|++|
T Consensus 99 ~~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~--~V~~v~~~~--~~~~l~sgs~D~~i 174 (410)
T 1vyh_C 99 PEKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD--SVQDISFDH--SGKLLASCSADMTI 174 (410)
T ss_dssp SCSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSS--CEEEEEECT--TSSEEEEEETTSCC
T ss_pred CceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCC--cEEEEEEcC--CCCEEEEEeCCCeE
Confidence 44678999999999999999999999999999999999999988888888764 478888887 56899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+.++++. .....|...+ .+.. +.+ ++. +++++
T Consensus 175 ~iwd~~~~~~~-------~~~~~h~~~V-----------------~~v~------------------~~p-~~~-~l~s~ 210 (410)
T 1vyh_C 175 KLWDFQGFECI-------RTMHGHDHNV-----------------SSVS------------------IMP-NGD-HIVSA 210 (410)
T ss_dssp CEEETTSSCEE-------ECCCCCSSCE-----------------EEEE------------------ECS-SSS-EEEEE
T ss_pred EEEeCCCCcee-------EEEcCCCCCE-----------------EEEE------------------EeC-CCC-EEEEE
Confidence 99999875421 1111110000 0000 111 122 45677
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~ 248 (374)
+.|++|++||+++++++..+..+. ....+ ..+.+ ....+++|+.||+|++||++. ......+
T Consensus 211 s~D~~i~~wd~~~~~~~~~~~~h~----------~~v~~---~~~~~----~g~~l~s~s~D~~v~vwd~~~-~~~~~~~ 272 (410)
T 1vyh_C 211 SRDKTIKMWEVQTGYCVKTFTGHR----------EWVRM---VRPNQ----DGTLIASCSNDQTVRVWVVAT-KECKAEL 272 (410)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCS----------SCEEE---EEECT----TSSEEEEEETTSCEEEEETTT-CCEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEEeCCC----------ccEEE---EEECC----CCCEEEEEcCCCeEEEEECCC-CceeeEe
Confidence 889999999999998877765421 11111 12322 223689999999999999986 4456778
Q ss_pred ecCccCeEEEEEecC--------------------CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECC
Q 017296 249 KVHLEPVLCLSIDES--------------------CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 308 (374)
Q Consensus 249 ~~h~~~v~~~~~~~~--------------------~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 308 (374)
.+|...|.++.|+|+ +..+++|+.|++|++||++.. .+. ..+..|...|.+++|+|
T Consensus 273 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~--~~~--~~~~~h~~~v~~v~~~~ 348 (410)
T 1vyh_C 273 REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTG--MCL--MTLVGHDNWVRGVLFHS 348 (410)
T ss_dssp CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTT--EEE--EEEECCSSCEEEEEECS
T ss_pred cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCC--ceE--EEEECCCCcEEEEEEcC
Confidence 899999999999875 557899999999999999643 332 34556778899999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 309 DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 309 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
++++|++|+.||+|++||+.+++++.++.+|...|.+++|+|++++|||||.|++|++|++
T Consensus 349 ~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 349 GGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp SSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999999986
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.7e-42 Score=316.87 Aligned_cols=303 Identities=18% Similarity=0.258 Sum_probs=229.8
Q ss_pred CCCCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeecccc
Q 017296 6 PPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (374)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (374)
...++..+|+||.++|++++|+|++.+|+|||.|++|+|||..+++....+..|. ..+.++++++ +++.+++|+.|
T Consensus 52 ~~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~--~~v~~~~~sp--~g~~lasg~~d 127 (354)
T 2pbi_B 52 FVMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPC--TWVMACAYAP--SGCAIACGGLD 127 (354)
T ss_dssp CCCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS--SCCCEEEECT--TSSEEEEESTT
T ss_pred cccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCC--CCEEEEEECC--CCCEEEEeeCC
Confidence 3446788999999999999999999999999999999999998888777666554 3477888887 67899999999
Q ss_pred CeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEE
Q 017296 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (374)
Q Consensus 86 ~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (374)
+++++|++..+....... .......|...+ .+. .+.+.+ . .+
T Consensus 128 ~~i~v~~~~~~~~~~~~~-~~~~~~~h~~~v-----------------~~~------------------~~~~~~-~-~l 169 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAA-KKKSVAMHTNYL-----------------SAC------------------SFTNSD-M-QI 169 (354)
T ss_dssp SEEEEEECCCCTTCCSGG-GCEEEEECSSCE-----------------EEE------------------EECSSS-S-EE
T ss_pred CCEEEEEEeccccccccc-cceeeeccCCcE-----------------EEE------------------EEeCCC-C-EE
Confidence 999999997542111000 000000000000 000 011111 2 35
Q ss_pred EcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCce
Q 017296 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (374)
Q Consensus 166 ~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~ 245 (374)
++++.|++|++||+++++.+..+..+. ....++ .+.+. .....+++|+.||+|++||+++ ...+
T Consensus 170 ~t~s~D~~v~lwd~~~~~~~~~~~~h~----------~~v~~~---~~~~~--~~g~~l~sgs~Dg~v~~wd~~~-~~~~ 233 (354)
T 2pbi_B 170 LTASGDGTCALWDVESGQLLQSFHGHG----------ADVLCL---DLAPS--ETGNTFVSGGCDKKAMVWDMRS-GQCV 233 (354)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCS----------SCEEEE---EECCC--SSCCEEEEEETTSCEEEEETTT-CCEE
T ss_pred EEEeCCCcEEEEeCCCCeEEEEEcCCC----------CCeEEE---EEEeC--CCCCEEEEEeCCCeEEEEECCC-CcEE
Confidence 577789999999999999877775421 112222 23222 1123689999999999999986 4567
Q ss_pred eeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q 017296 246 TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIY 325 (374)
Q Consensus 246 ~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iw 325 (374)
..+.+|..+|.+++|+|++..+++++.|++|++||++... .........+...+.+++|+|++++|++|+.|++|++|
T Consensus 234 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vw 311 (354)
T 2pbi_B 234 QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVW 311 (354)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEE
Confidence 7888999999999999999999999999999999997542 22222112223468899999999999999999999999
Q ss_pred EccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 326 NYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 326 d~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
|+.+++.+..+.+|.+.|.+++|+|||++|||||.|++|++|+
T Consensus 312 d~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 312 DVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred ECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999999999999999999999999999999999999996
No 5
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.6e-42 Score=308.01 Aligned_cols=290 Identities=17% Similarity=0.299 Sum_probs=223.7
Q ss_pred CeEEeecCCCceeEEEEeCC----CCEEEEecCCCcEEEEeCcccce--eeeeeeeeceeeeEEeccCCccccceeeecc
Q 017296 10 PVAVLRGHRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVISQG 83 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~~----~~~l~s~s~D~~v~vWd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (374)
....+++|.++|++|+|+++ +.+|+|||.|++|+|||..+++. ...+.+|. ..+.++.+++ ++..+++++
T Consensus 24 ~~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~--~~v~~~~~~~--~~~~l~s~s 99 (321)
T 3ow8_A 24 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQ--LGVVSVDISH--TLPIAASSS 99 (321)
T ss_dssp EEEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECS--SSSEEEEEE
T ss_pred eeeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCC--CCEEEEEECC--CCCEEEEEe
Confidence 44667799999999999874 56899999999999999876653 23455665 3578888877 567899999
Q ss_pred ccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCce
Q 017296 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (374)
Q Consensus 84 ~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (374)
.|++||+||+.+++... .+..... ...+. .+.++ ..
T Consensus 100 ~D~~i~lWd~~~~~~~~----~~~~~~~--------------------~~~~~------------------~~spd-g~- 135 (321)
T 3ow8_A 100 LDAHIRLWDLENGKQIK----SIDAGPV--------------------DAWTL------------------AFSPD-SQ- 135 (321)
T ss_dssp TTSEEEEEETTTTEEEE----EEECCTT--------------------CCCCE------------------EECTT-SS-
T ss_pred CCCcEEEEECCCCCEEE----EEeCCCc--------------------cEEEE------------------EECCC-CC-
Confidence 99999999998763210 0000000 00000 01122 23
Q ss_pred EEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC
Q 017296 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (374)
Q Consensus 164 ~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~ 243 (374)
++++++.|+.|++||+++++....+..+. ....+ ..+.++ ...+++|+.||.|++||+++ ..
T Consensus 136 ~l~~g~~dg~v~i~~~~~~~~~~~~~~~~----------~~v~~---~~~spd----g~~lasg~~dg~i~iwd~~~-~~ 197 (321)
T 3ow8_A 136 YLATGTHVGKVNIFGVESGKKEYSLDTRG----------KFILS---IAYSPD----GKYLASGAIDGIINIFDIAT-GK 197 (321)
T ss_dssp EEEEECTTSEEEEEETTTCSEEEEEECSS----------SCEEE---EEECTT----SSEEEEEETTSCEEEEETTT-TE
T ss_pred EEEEEcCCCcEEEEEcCCCceeEEecCCC----------ceEEE---EEECCC----CCEEEEEcCCCeEEEEECCC-Cc
Confidence 45677789999999999988766654321 01111 134332 23689999999999999986 45
Q ss_pred ceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEE
Q 017296 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVR 323 (374)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~ 323 (374)
.+..+.+|..+|.+++|+|++..+++++.|++|++||++... ....+..|...|.+++|+|++++|++++.|++|+
T Consensus 198 ~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~----~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~ 273 (321)
T 3ow8_A 198 LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHAN----LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVK 273 (321)
T ss_dssp EEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcc----eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 677888999999999999999999999999999999997543 2234566778899999999999999999999999
Q ss_pred EEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 324 IYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 324 iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
+||+.+++++.++.+|...|.+++|+|++++|++++.|++|++||.
T Consensus 274 iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 274 VWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred EEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 9999999999999999999999999999999999999999999996
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.8e-40 Score=294.29 Aligned_cols=295 Identities=15% Similarity=0.197 Sum_probs=222.6
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
.++..+|++|.+.|++|+|+|++++|+||+.|++|++||+.+++.+..+..|.. .+.++.|++ +++.+++|+.|++
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~--~v~~~~~~~--~~~~l~s~s~d~~ 78 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTET--PVRAGKFIA--RKNWIIVGSDDFR 78 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS--CEEEEEEEG--GGTEEEEEETTSE
T ss_pred ceeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCC--cEEEEEEeC--CCCEEEEECCCCE
Confidence 357889999999999999999999999999999999999999988888776653 477778876 6689999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
||+||+.+++.. ..+..+...... .. +.+. .. ++++
T Consensus 79 i~vwd~~~~~~~----~~~~~h~~~v~~--------------------~~------------------~~~~-~~-~l~s 114 (304)
T 2ynn_A 79 IRVFNYNTGEKV----VDFEAHPDYIRS--------------------IA------------------VHPT-KP-YVLS 114 (304)
T ss_dssp EEEEETTTCCEE----EEEECCSSCEEE--------------------EE------------------ECSS-SS-EEEE
T ss_pred EEEEECCCCcEE----EEEeCCCCcEEE--------------------EE------------------EcCC-CC-EEEE
Confidence 999999887421 011110000000 00 1111 12 4668
Q ss_pred ccCCCeEEEEecCCCceeE-EeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee
Q 017296 168 GEQLSEVEIWDLNTAERCT-RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~ 246 (374)
|+.|++|++||++++..+. .+..+ .....+ ..|.|. +...+++|+.||+|++||++.......
T Consensus 115 gs~D~~v~lWd~~~~~~~~~~~~~h----------~~~v~~---v~~~p~---~~~~l~sgs~D~~v~iwd~~~~~~~~~ 178 (304)
T 2ynn_A 115 GSDDLTVKLWNWENNWALEQTFEGH----------EHFVMC---VAFNPK---DPSTFASGCLDRTVKVWSLGQSTPNFT 178 (304)
T ss_dssp EETTSCEEEEEGGGTTEEEEEECCC----------CSCEEE---EEECTT---CTTEEEEEETTSEEEEEETTCSSCSEE
T ss_pred ECCCCeEEEEECCCCcchhhhhccc----------CCcEEE---EEECCC---CCCEEEEEeCCCeEEEEECCCCCccce
Confidence 8889999999999875433 33321 111122 134332 223689999999999999986544444
Q ss_pred eeecCccCeEEEEEec--CCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q 017296 247 AMKVHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 324 (374)
Q Consensus 247 ~~~~h~~~v~~~~~~~--~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~i 324 (374)
...+|...+..+.+.+ ++..+++++.|++|++||++.. .+ ...+..|...+.+++|+|++++|++|+.||+|++
T Consensus 179 ~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~--~~--~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~i 254 (304)
T 2ynn_A 179 LTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK--SC--VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKI 254 (304)
T ss_dssp EECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTT--EE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred eccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCC--cc--ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEE
Confidence 4456778899999965 6678999999999999999753 33 2445678888999999999999999999999999
Q ss_pred EEccCCeEEEEecccCCceEEEEEeCCCC--EEEEEeCCCcEEEecCCC
Q 017296 325 YNYRKGSALAILKYHHATCNAVSFSSDCK--LMASASEDSTVALWELYP 371 (374)
Q Consensus 325 wd~~~~~~~~~~~~h~~~v~~v~~sp~~~--~las~s~D~~v~~W~~~~ 371 (374)
||..+++.++++..|.+.+++++|+|++. ++|+|+.|+ +.+|++..
T Consensus 255 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~~ 302 (304)
T 2ynn_A 255 WNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLGN 302 (304)
T ss_dssp EETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC-
T ss_pred EECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEecc
Confidence 99999999999999999999999999886 588887665 56777653
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-39 Score=293.94 Aligned_cols=295 Identities=15% Similarity=0.236 Sum_probs=214.5
Q ss_pred CCCeEEeecCCCceeEEEEeCCC-CEEEEecCCCcEEEEeCcc-----cceeeeeeeeeceeeeEEeccCCccccceeee
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQ-----HRTVSSSWVHSAAHGIVSVATGPSIGLNKVIS 81 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~-~~l~s~s~D~~v~vWd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 81 (374)
..+..+|+||+++|++|+|+|++ ++|+|||.|++|++||+.. +.++..+.+|. ..+.++++++ +++++++
T Consensus 7 ~~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~--~~v~~~~~s~--dg~~l~s 82 (319)
T 3frx_A 7 LVLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHS--HIVQDCTLTA--DGAYALS 82 (319)
T ss_dssp EEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCS--SCEEEEEECT--TSSEEEE
T ss_pred EEEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCc--ccEEEEEECC--CCCEEEE
Confidence 35678899999999999999865 8999999999999999864 23455666675 4578888887 6789999
Q ss_pred ccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCC
Q 017296 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGP 161 (374)
Q Consensus 82 ~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (374)
++.|++||+||+.+++.. .....|...+ .+.. +.+ +
T Consensus 83 ~s~D~~v~~wd~~~~~~~-------~~~~~h~~~v-----------------~~~~------------------~~~-~- 118 (319)
T 3frx_A 83 ASWDKTLRLWDVATGETY-------QRFVGHKSDV-----------------MSVD------------------IDK-K- 118 (319)
T ss_dssp EETTSEEEEEETTTTEEE-------EEEECCSSCE-----------------EEEE------------------ECT-T-
T ss_pred EeCCCEEEEEECCCCCee-------EEEccCCCcE-----------------EEEE------------------EcC-C-
Confidence 999999999999887421 1100010000 0000 011 1
Q ss_pred ceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCC--CCceEEEEEecCCcEEEEecc
Q 017296 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS--QGFVNVLAGYEDGSILVWDIR 239 (374)
Q Consensus 162 ~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~gs~dg~i~iwdl~ 239 (374)
..++++++.|++|++||++. +++..+..+. ....++ .+.+... .....+++++.|+.|++||++
T Consensus 119 ~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~----------~~v~~~---~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~ 184 (319)
T 3frx_A 119 ASMIISGSRDKTIKVWTIKG-QCLATLLGHN----------DWVSQV---RVVPNEKADDDSVTIISAGNDKMVKAWNLN 184 (319)
T ss_dssp SCEEEEEETTSCEEEEETTS-CEEEEECCCS----------SCEEEE---EECCC------CCEEEEEETTSCEEEEETT
T ss_pred CCEEEEEeCCCeEEEEECCC-CeEEEEeccC----------CcEEEE---EEccCCCCCCCccEEEEEeCCCEEEEEECC
Confidence 12567888899999999974 4444443221 111111 2222211 122368999999999999997
Q ss_pred CCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC
Q 017296 240 NPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD 319 (374)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d 319 (374)
. ......+.+|..+|.+++|+|++..+++++.|++|++||+... ... ..+.. ...+.+++|+|++.++++++.
T Consensus 185 ~-~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~--~~~--~~~~~-~~~v~~~~~sp~~~~la~~~~- 257 (319)
T 3frx_A 185 Q-FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAK--KAM--YTLSA-QDEVFSLAFSPNRYWLAAATA- 257 (319)
T ss_dssp T-TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTT--EEE--EEEEC-CSCEEEEEECSSSSEEEEEET-
T ss_pred c-chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC--cEE--EEecC-CCcEEEEEEcCCCCEEEEEcC-
Confidence 6 3456678899999999999999999999999999999999754 222 22232 356999999999999998774
Q ss_pred CeEEEEEccCCeEEEEec--------ccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 320 RRVRIYNYRKGSALAILK--------YHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 320 g~v~iwd~~~~~~~~~~~--------~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
+.+++|++.....+..+. .|...+.+++|+|||++|++|+.|++|++|++..
T Consensus 258 ~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 258 TGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp TEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEE
T ss_pred CCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEee
Confidence 569999998777666553 3456799999999999999999999999999854
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2e-39 Score=296.93 Aligned_cols=295 Identities=19% Similarity=0.256 Sum_probs=202.7
Q ss_pred CeEEeecCCCceeEEEEeCCCCEEEEecC------CCcEEEEeCcccceeee----eeeeeceeeeEEeccCCcccccee
Q 017296 10 PVAVLRGHRASVTDVCFHQTKPILFAGTT------GGELRIWDTVQHRTVSS----SWVHSAAHGIVSVATGPSIGLNKV 79 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~~~~~l~s~s~------D~~v~vWd~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l 79 (374)
|.....+|++.|++|+|+|||++|+|||. |++|++|+..++.+... ...|. ..+.+++|++ + ..+
T Consensus 34 p~~~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~--~~V~~~~~s~--d-~~~ 108 (357)
T 4g56_B 34 PVTAPACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTE--AGVTDVAWVS--E-KGI 108 (357)
T ss_dssp ------CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECS--SCEEEEEEET--T-TEE
T ss_pred CCCCcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCC--CCEEEEEEcC--C-CCE
Confidence 33445689999999999999999999998 67899999877654322 22333 3588899987 3 467
Q ss_pred eeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCC
Q 017296 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAE 159 (374)
Q Consensus 80 ~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (374)
++++.|++||+||+.+++...........+.... .+.. +.++
T Consensus 109 l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V--------------------~~v~------------------~spd 150 (357)
T 4g56_B 109 LVASDSGAVELWEILEKESLLVNKFAKYEHDDIV--------------------KTLS------------------VFSD 150 (357)
T ss_dssp EEEETTSCEEEC--------CCCCEEECCCSSCE--------------------EEEE------------------ECSS
T ss_pred EEEECCCEEEEeeccccceeEEEeeccCCCCCCE--------------------EEEE------------------ECCC
Confidence 7889999999999988753221111000000000 0000 1112
Q ss_pred CCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEecc
Q 017296 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (374)
Q Consensus 160 ~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~ 239 (374)
.+ ++++++.|++|++||+++++.+..+..+. ....++ .|.++ +...+++++.||+|++||++
T Consensus 151 -g~-~l~sgs~dg~v~iwd~~~~~~~~~~~~h~----------~~v~~v---~~s~~---~~~~~~s~~~dg~v~~wd~~ 212 (357)
T 4g56_B 151 -GT-QAVSGGKDFSVKVWDLSQKAVLKSYNAHS----------SEVNCV---AACPG---KDTIFLSCGEDGRILLWDTR 212 (357)
T ss_dssp -SS-EEEEEETTSCEEEEETTTTEEEEEECCCS----------SCEEEE---EECTT---CSSCEEEEETTSCEEECCTT
T ss_pred -CC-EEEEEeCCCeEEEEECCCCcEEEEEcCCC----------CCEEEE---EEccC---CCceeeeeccCCceEEEECC
Confidence 22 45677889999999999998877775321 111111 23332 22358899999999999998
Q ss_pred CCCCceee--eecCccCeEEEEEecCC-CceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCC-CEEEE
Q 017296 240 NPGIPLTA--MKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAAT 315 (374)
Q Consensus 240 ~~~~~~~~--~~~h~~~v~~~~~~~~~-~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s 315 (374)
+.. +... +..|...+.+++|+|+. ..+++|+.|+.|++||++..... ..+..+...|.+++|+|++ ++||+
T Consensus 213 ~~~-~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~----~~~~~~~~~v~~l~~sp~~~~~las 287 (357)
T 4g56_B 213 KPK-PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA----QTSAVHSQNITGLAYSYHSSPFLAS 287 (357)
T ss_dssp SSS-CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGC----EEECCCSSCEEEEEECSSSSCCEEE
T ss_pred CCc-eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEe----EEEeccceeEEEEEEcCCCCCEEEE
Confidence 643 2322 34567789999999864 56788999999999999754322 2345567789999999987 57999
Q ss_pred EeCCCeEEEEEccCCeEEEEecccCCceEEEEEeC-CCCEEEEEeCCCcEEEecCCC
Q 017296 316 AGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS-DCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 316 ~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~~W~~~~ 371 (374)
|+.|++|+|||+++++.+..+ +|.+.|.+|+|+| |+++|||+|.|++|++|++..
T Consensus 288 gs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 288 ISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999998877654 7999999999999 789999999999999999843
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.8e-38 Score=283.55 Aligned_cols=292 Identities=21% Similarity=0.289 Sum_probs=219.7
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
.+..++.||.++|++++|+|++++|++|+.|+.|++||..+++....+.+|. ..+.++++++ +++.|++++.|++|
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~s~~~d~~i 89 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK--LGISDVAWSS--DSNLLVSASDDKTL 89 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SCEEEEEECT--TSSEEEEEETTSEE
T ss_pred eeEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCC--CceEEEEEcC--CCCEEEEECCCCEE
Confidence 4678899999999999999999999999999999999999888877777665 3478888887 56899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+++++... .+....... .+.. +.+ ... +++++
T Consensus 90 ~vwd~~~~~~~~----~~~~~~~~v--------------------~~~~------------------~~~-~~~-~l~s~ 125 (312)
T 4ery_A 90 KIWDVSSGKCLK----TLKGHSNYV--------------------FCCN------------------FNP-QSN-LIVSG 125 (312)
T ss_dssp EEEETTTCCEEE----EEECCSSCE--------------------EEEE------------------ECS-SSS-EEEEE
T ss_pred EEEECCCCcEEE----EEcCCCCCE--------------------EEEE------------------EcC-CCC-EEEEE
Confidence 999998764210 110000000 0000 011 112 45677
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee-
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA- 247 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~- 247 (374)
+.|++|++||+++++.+..+..+. ....+ ..+.++ ...+++|+.||.|++||+++.. .+..
T Consensus 126 ~~d~~i~iwd~~~~~~~~~~~~~~----------~~v~~---~~~~~~----~~~l~~~~~d~~i~~wd~~~~~-~~~~~ 187 (312)
T 4ery_A 126 SFDESVRIWDVKTGKCLKTLPAHS----------DPVSA---VHFNRD----GSLIVSSSYDGLCRIWDTASGQ-CLKTL 187 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCS----------SCEEE---EEECTT----SSEEEEEETTSCEEEEETTTCC-EEEEE
T ss_pred eCCCcEEEEECCCCEEEEEecCCC----------CcEEE---EEEcCC----CCEEEEEeCCCcEEEEECCCCc-eeeEE
Confidence 889999999999998777665321 11111 123332 2368999999999999998643 3333
Q ss_pred eecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCC---eEEEEECCCCCEEEEEeCCCeEEE
Q 017296 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG---ISGTSIRPDSKIAATAGWDRRVRI 324 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~---v~~~~~sp~~~~l~s~~~dg~v~i 324 (374)
...+..++.+++|+|++..+++++.|+.|++||++.. ... ..+..+... +......+++++|++|+.||+|++
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~v 263 (312)
T 4ery_A 188 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKG--KCL--KTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYI 263 (312)
T ss_dssp CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTT--EEE--EEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEE
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC--cEE--EEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEE
Confidence 3456778999999999999999999999999999643 322 223333322 223334478889999999999999
Q ss_pred EEccCCeEEEEecccCCceEEEEEeCCCCEEEEEe--CCCcEEEecCC
Q 017296 325 YNYRKGSALAILKYHHATCNAVSFSSDCKLMASAS--EDSTVALWELY 370 (374)
Q Consensus 325 wd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s--~D~~v~~W~~~ 370 (374)
||+.+++.+..+.+|...|.+++|+|++++|++++ .|++|++|+.+
T Consensus 264 wd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 264 WNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred EECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999999999999999999999999999999997 69999999875
No 10
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.2e-38 Score=286.80 Aligned_cols=295 Identities=16% Similarity=0.256 Sum_probs=212.7
Q ss_pred CCeEEeecCCCceeEEEEeCC-CCEEEEecCCCcEEEEeCcccc-----eeeeeeeeeceeeeEEeccCCccccceeeec
Q 017296 9 DPVAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHR-----TVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~-~~~l~s~s~D~~v~vWd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 82 (374)
.+..+|+||++.|++|+|+|+ +++|+|||.|++|+|||+.+.+ +...+.+|. ..+.++++++ +++.++++
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~--~~V~~~~~s~--dg~~l~s~ 104 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHS--HFVSDVVISS--DGQFALSG 104 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCS--SCEEEEEECT--TSSEEEEE
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCC--CCEEEEEECC--CCCEEEEE
Confidence 356689999999999999997 6899999999999999987654 344555564 4588888887 67899999
Q ss_pred cccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCc
Q 017296 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (374)
Q Consensus 83 ~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (374)
+.|+.|++|+...+.... ......... .... . .....
T Consensus 105 ~~d~~i~~~~~~~~~~~~----~~~~~~~~~--------------------~~~~------------------~-~~~~~ 141 (340)
T 4aow_A 105 SWDGTLRLWDLTTGTTTR----RFVGHTKDV--------------------LSVA------------------F-SSDNR 141 (340)
T ss_dssp ETTSEEEEEETTTTEEEE----EEECCSSCE--------------------EEEE------------------E-CTTSS
T ss_pred cccccceEEeecccceee----eecCCCCce--------------------eEEE------------------E-eecCc
Confidence 999999999997652100 000000000 0000 0 01112
Q ss_pred eEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC
Q 017296 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~ 242 (374)
++++++.|+.+++||+............ + .... ....+.+.. ....+++++.|+.|++||++. .
T Consensus 142 -~l~s~s~d~~~~~~d~~~~~~~~~~~~~-------~--~~~v---~~~~~~~~~--~~~~~~s~~~d~~i~i~d~~~-~ 205 (340)
T 4aow_A 142 -QIVSGSRDKTIKLWNTLGVCKYTVQDES-------H--SEWV---SCVRFSPNS--SNPIIVSCGWDKLVKVWNLAN-C 205 (340)
T ss_dssp -CEEEEETTSCEEEECTTSCEEEEECSSS-------C--SSCE---EEEEECSCS--SSCEEEEEETTSCEEEEETTT-T
T ss_pred -cceeecCCCeEEEEEeCCCceEEEEecc-------c--cCcc---cceEEccCC--CCcEEEEEcCCCEEEEEECCC-C
Confidence 3567778999999998876543322111 1 1111 111233222 223578899999999999986 4
Q ss_pred CceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeE
Q 017296 243 IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 322 (374)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v 322 (374)
.....+.+|..+|.+++|+|++..+++++.|++|++||++.. ... ..+.. ...+.+++|+|++.++ +++.|++|
T Consensus 206 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~--~~~--~~~~~-~~~v~~~~~~~~~~~~-~~~~d~~i 279 (340)
T 4aow_A 206 KLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG--KHL--YTLDG-GDIINALCFSPNRYWL-CAATGPSI 279 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT--EEE--EEEEC-SSCEEEEEECSSSSEE-EEEETTEE
T ss_pred ceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC--cee--eeecC-CceEEeeecCCCCcee-eccCCCEE
Confidence 567778899999999999999999999999999999999754 222 22232 3569999999998655 56679999
Q ss_pred EEEEccCCeEEEEe---------cccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 323 RIYNYRKGSALAIL---------KYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 323 ~iwd~~~~~~~~~~---------~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
++||++.+..+..+ .+|...|.+++|+|||++||||+.|++|+||++..+
T Consensus 280 ~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 280 KIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp EEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred EEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 99999887766544 368889999999999999999999999999998765
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=292.97 Aligned_cols=290 Identities=15% Similarity=0.183 Sum_probs=204.0
Q ss_pred ecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCccc-------cee--eeeeeeeceeeeEEeccCCccccceeeecccc
Q 017296 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH-------RTV--SSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (374)
Q Consensus 15 ~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (374)
..|...|.+++|+|||++|++++ |+++++||.... ... .....+.....+.+++|++ + +++++|+.|
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~--d-~~l~~~s~d 102 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG--E-RGILVASDS 102 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET--T-TEEEEEETT
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC--C-CeEEEEECC
Confidence 46788899999999999999988 778889984211 000 0001111223588888887 3 578999999
Q ss_pred CeEEEEecCCCCCCCCCceeeee-cceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceE
Q 017296 86 GTVKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (374)
Q Consensus 86 ~~vrvwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (374)
|+||+||+.+++... ..+. ...|...+ .+.. +.++ ++ +
T Consensus 103 g~v~lWd~~~~~~~~----~~~~~~~~H~~~V-----------------~~v~------------------~spd-g~-~ 141 (344)
T 4gqb_B 103 GAVELWELDENETLI----VSKFCKYEHDDIV-----------------STVS------------------VLSS-GT-Q 141 (344)
T ss_dssp SEEEEEEECTTSSCE----EEEEEEECCSSCE-----------------EEEE------------------ECTT-SS-E
T ss_pred CEEEEEeccCCCcee----EeeccccCCCCCE-----------------EEEE------------------ECCC-CC-E
Confidence 999999999875321 1100 00000000 0000 1112 22 4
Q ss_pred EEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCc
Q 017296 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (374)
Q Consensus 165 ~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~ 244 (374)
+++|+.|++|++||+++++++..+..+. ....++ .|.++ +...+++|+.||+|++||++.. .+
T Consensus 142 l~sgs~d~~i~iwd~~~~~~~~~~~~h~----------~~V~~~---~~~~~---~~~~l~s~s~D~~v~iwd~~~~-~~ 204 (344)
T 4gqb_B 142 AVSGSKDICIKVWDLAQQVVLSSYRAHA----------AQVTCV---AASPH---KDSVFLSCSEDNRILLWDTRCP-KP 204 (344)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCS----------SCEEEE---EECSS---CTTEEEEEETTSCEEEEETTSS-SC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCcC----------CceEEE---EecCC---CCCceeeecccccccccccccc-ce
Confidence 6678889999999999999888775431 111221 23332 2235889999999999999864 34
Q ss_pred eeee--ecCccCeEEEEEecC-CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCC-CEEEEEeCCC
Q 017296 245 LTAM--KVHLEPVLCLSIDES-CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAATAGWDR 320 (374)
Q Consensus 245 ~~~~--~~h~~~v~~~~~~~~-~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg 320 (374)
...+ ..|...+.++.+++. ...+++|+.|++|++||++..... ..+..|...|.+++|+|++ ++||+|+.|+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~----~~~~~h~~~v~~v~fsp~g~~~lasgs~D~ 280 (344)
T 4gqb_B 205 ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV----LSSAVHSQCVTGLVFSPHSVPFLASLSEDC 280 (344)
T ss_dssp EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC----EEEECCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE----EEEcCCCCCEEEEEEccCCCeEEEEEeCCC
Confidence 4444 345667999999875 456789999999999999754322 3456677889999999997 5799999999
Q ss_pred eEEEEEccCCeEEEEecccCCceEEEEEeCCCC-EEEEEeCCCcEEEecCCC
Q 017296 321 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELYP 371 (374)
Q Consensus 321 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~~W~~~~ 371 (374)
+|+|||+.+++.+ .+.+|.+.|.+++|+|+++ +|+|+|.|++|++|++..
T Consensus 281 ~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 281 SLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp CEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred eEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 9999999888755 5789999999999999987 678999999999999853
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.4e-39 Score=292.64 Aligned_cols=301 Identities=17% Similarity=0.202 Sum_probs=215.3
Q ss_pred CCeEEeecCCC-ceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeee---eeeeeceeeeEEeccCCccccceeeeccc
Q 017296 9 DPVAVLRGHRA-SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS---SWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (374)
Q Consensus 9 ~~~~~l~gH~~-~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (374)
.++.+|.+|.+ .|++|+|+|+|++|+||+.|++|+|||..++..... ..+|. ..+.+++|++ ++++|++|+.
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~--~~v~~~~~sp--~g~~l~s~s~ 81 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQ--RTVRKVAWSP--CGNYLASASF 81 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCS--SCEEEEEECT--TSSEEEEEET
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccC--CcEEEEEECC--CCCEEEEEEC
Confidence 56788999998 999999999999999999999999999887653221 12444 3588899987 6789999999
Q ss_pred cCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceE
Q 017296 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (374)
Q Consensus 85 D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (374)
|+++++||+..+.. ..+.....|...+ .+.. +.+ ++. +
T Consensus 82 D~~v~iw~~~~~~~-----~~~~~~~~h~~~v-----------------~~v~------------------~sp-~~~-~ 119 (345)
T 3fm0_A 82 DATTCIWKKNQDDF-----ECVTTLEGHENEV-----------------KSVA------------------WAP-SGN-L 119 (345)
T ss_dssp TSCEEEEEECCC-E-----EEEEEECCCSSCE-----------------EEEE------------------ECT-TSS-E
T ss_pred CCcEEEEEccCCCe-----EEEEEccCCCCCc-----------------eEEE------------------EeC-CCC-E
Confidence 99999999976521 0011100000000 0000 111 122 4
Q ss_pred EEcccCCCeEEEEecCCCcee---EEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCC
Q 017296 165 AVAGEQLSEVEIWDLNTAERC---TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (374)
Q Consensus 165 ~~~~~~d~~i~vWd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~ 241 (374)
+++++.|++|++||++++... ..+..+ . ....+ ..+.++ ...+++|+.|++|++||++..
T Consensus 120 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h--------~--~~v~~---~~~~p~----~~~l~s~s~d~~i~~w~~~~~ 182 (345)
T 3fm0_A 120 LATCSRDKSVWVWEVDEEDEYECVSVLNSH--------T--QDVKH---VVWHPS----QELLASASYDDTVKLYREEED 182 (345)
T ss_dssp EEEEETTSCEEEEEECTTSCEEEEEEECCC--------C--SCEEE---EEECSS----SSCEEEEETTSCEEEEEEETT
T ss_pred EEEEECCCeEEEEECCCCCCeEEEEEecCc--------C--CCeEE---EEECCC----CCEEEEEeCCCcEEEEEecCC
Confidence 667788999999999876432 222211 1 11111 124433 235899999999999999764
Q ss_pred C-CceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCC-----------eEEEEEee-ecCCCCeEEEEECC
Q 017296 242 G-IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG-----------SCVIKKEI-NLERPGISGTSIRP 308 (374)
Q Consensus 242 ~-~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~-----------~~~~~~~~-~~~~~~v~~~~~sp 308 (374)
. .....+.+|..+|.+++|+|++..+++++.|++|++||+..... .......+ ..|...|.+++|+|
T Consensus 183 ~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~ 262 (345)
T 3fm0_A 183 DWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQ 262 (345)
T ss_dssp EEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECT
T ss_pred CEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEec
Confidence 3 23467889999999999999999999999999999999632110 11111122 23667899999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCe---------EEEEecccCCceEEEEEeCCCC-EEEEEeCCCcEEEecCCCC
Q 017296 309 DSKIAATAGWDRRVRIYNYRKGS---------ALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELYPP 372 (374)
Q Consensus 309 ~~~~l~s~~~dg~v~iwd~~~~~---------~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~~W~~~~~ 372 (374)
++.+|++++.|++|++|+..... ....+.+|...|++|+|+|++. +|||||.|++|++|++..+
T Consensus 263 ~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~ 336 (345)
T 3fm0_A 263 LTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRP 336 (345)
T ss_dssp TTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-
T ss_pred CCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCC
Confidence 99999999999999999986542 1223468999999999999985 9999999999999998654
No 13
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.7e-39 Score=296.82 Aligned_cols=291 Identities=20% Similarity=0.272 Sum_probs=215.2
Q ss_pred ecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeece----------------eeeEEeccCCccccce
Q 017296 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA----------------HGIVSVATGPSIGLNK 78 (374)
Q Consensus 15 ~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~ 78 (374)
.+|.+.|++++|+|+|++|++|+ |++++||+..+++.+..+..|... ..+.+++|++ ++++
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~--dg~~ 137 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP--DGKF 137 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT--TSSE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC--CCCE
Confidence 47999999999999999999987 789999999988877665544211 1367888887 6789
Q ss_pred eeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCC
Q 017296 79 VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA 158 (374)
Q Consensus 79 l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (374)
|++|+.|++|++||+.+++.. .....|...+ .+.. +.+
T Consensus 138 l~s~~~d~~i~iwd~~~~~~~-------~~~~~h~~~v-----------------~~~~------------------~~p 175 (393)
T 1erj_A 138 LATGAEDRLIRIWDIENRKIV-------MILQGHEQDI-----------------YSLD------------------YFP 175 (393)
T ss_dssp EEEEETTSCEEEEETTTTEEE-------EEECCCSSCE-----------------EEEE------------------ECT
T ss_pred EEEEcCCCeEEEEECCCCcEE-------EEEccCCCCE-----------------EEEE------------------EcC
Confidence 999999999999999876321 0000000000 0000 111
Q ss_pred CCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEec
Q 017296 159 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (374)
Q Consensus 159 ~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl 238 (374)
++ . .+++++.|++|++||++++++...+... ....+ ..+.+. ....+++|+.||.|++||+
T Consensus 176 ~~-~-~l~s~s~d~~v~iwd~~~~~~~~~~~~~-----------~~v~~---~~~~~~---~~~~l~~~s~d~~v~iwd~ 236 (393)
T 1erj_A 176 SG-D-KLVSGSGDRTVRIWDLRTGQCSLTLSIE-----------DGVTT---VAVSPG---DGKYIAAGSLDRAVRVWDS 236 (393)
T ss_dssp TS-S-EEEEEETTSEEEEEETTTTEEEEEEECS-----------SCEEE---EEECST---TCCEEEEEETTSCEEEEET
T ss_pred CC-C-EEEEecCCCcEEEEECCCCeeEEEEEcC-----------CCcEE---EEEECC---CCCEEEEEcCCCcEEEEEC
Confidence 22 2 3567778999999999999876655321 01111 123321 2236899999999999999
Q ss_pred cCCCCceeee-------ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCe--------EEEEEeeecCCCCeEE
Q 017296 239 RNPGIPLTAM-------KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGS--------CVIKKEINLERPGISG 303 (374)
Q Consensus 239 ~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~--------~~~~~~~~~~~~~v~~ 303 (374)
+.. ..+..+ .+|...|.+++|++++..+++++.|++|++||++..... ......+..|...+.+
T Consensus 237 ~~~-~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 315 (393)
T 1erj_A 237 ETG-FLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLS 315 (393)
T ss_dssp TTC-CEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEE
T ss_pred CCC-cEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEE
Confidence 763 333333 579999999999999999999999999999998643210 0112234567778999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeC------CCCEEEEEeCCCcEEEecCC
Q 017296 304 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS------DCKLMASASEDSTVALWELY 370 (374)
Q Consensus 304 ~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp------~~~~las~s~D~~v~~W~~~ 370 (374)
++|+|++++|++|+.|++|++||+.+++.+..+.+|.+.|.+++|+| ++++|||||.|++|++|++.
T Consensus 316 ~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 316 VATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 99999999999999999999999999999999999999999999986 68899999999999999984
No 14
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.6e-39 Score=313.84 Aligned_cols=343 Identities=16% Similarity=0.218 Sum_probs=223.3
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeee-------eeeceeeeEEeccCCccccceee
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW-------VHSAAHGIVSVATGPSIGLNKVI 80 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~l~ 80 (374)
.+++.++.+|.+.|++++|+|+|++|+||+.|++|++||..+++++..+. +|. ..+.+++|++ ++++|+
T Consensus 180 ~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~--~~V~~v~~sp--dg~~l~ 255 (611)
T 1nr0_A 180 FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS--GSVFGLTWSP--DGTKIA 255 (611)
T ss_dssp BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSS--SCEEEEEECT--TSSEEE
T ss_pred CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccC--CCEEEEEECC--CCCEEE
Confidence 35677899999999999999999999999999999999998888776653 454 3588899987 678999
Q ss_pred eccccCeEEEEecCCCCCCCCCceeeeecc-eeeeeeeeeccccccccccCCCC--cccccccCceeecCCCCCCC----
Q 017296 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNS-YHFCKLSLVKEPYANAKQANEPK--DCYEREVGETVDTDSLCDSK---- 153 (374)
Q Consensus 81 s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---- 153 (374)
|++.|++||+||+.++++.. .+.... .......+....... ....... ..+..+.+.... ....+..
T Consensus 256 s~s~D~~v~lWd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l-~s~s~d~~i~~~~~~~~~~~~-~~~gh~~~v~~ 329 (611)
T 1nr0_A 256 SASADKTIKIWNVATLKVEK----TIPVGTRIEDQQLGIIWTKQAL-VSISANGFINFVNPELGSIDQ-VRYGHNKAITA 329 (611)
T ss_dssp EEETTSEEEEEETTTTEEEE----EEECCSSGGGCEEEEEECSSCE-EEEETTCCEEEEETTTTEEEE-EECCCSSCEEE
T ss_pred EEeCCCeEEEEeCCCCceee----eecCCCCccceeEEEEEcCCEE-EEEeCCCcEEEEeCCCCCcce-EEcCCCCCEEE
Confidence 99999999999998764311 111000 000000000000000 0000000 001111000000 0001111
Q ss_pred CCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccC--CC-----------------------------------
Q 017296 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCG--GS----------------------------------- 196 (374)
Q Consensus 154 ~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~--~~----------------------------------- 196 (374)
..+.+ +++ ++++++.|++|++||+.+++....+...... ..
T Consensus 330 l~~sp-dg~-~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~ 407 (611)
T 1nr0_A 330 LSSSA-DGK-TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVA 407 (611)
T ss_dssp EEECT-TSS-EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCE
T ss_pred EEEeC-CCC-EEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceee
Confidence 01122 333 4567778999999999987654432110000 00
Q ss_pred ---------CCcCCCCCcc-----------------------eeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC-
Q 017296 197 ---------PNFSSKGRGM-----------------------CMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI- 243 (374)
Q Consensus 197 ---------~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~- 243 (374)
..+++.+... ......|.| +...+++|+.|++|++||+.....
T Consensus 408 ~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~sp----dg~~lasgs~D~~v~lwd~~~~~~~ 483 (611)
T 1nr0_A 408 NKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSN----DKQFVAVGGQDSKVHVYKLSGASVS 483 (611)
T ss_dssp EECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECT----TSCEEEEEETTSEEEEEEEETTEEE
T ss_pred eecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeC----CCCEEEEeCCCCeEEEEEccCCcee
Confidence 0000000000 000112322 233689999999999999975321
Q ss_pred ceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEE
Q 017296 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVR 323 (374)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~ 323 (374)
.... .+|...|.+++|+|++..+++++.|++|++||+... +..........|...|.+++|+||+++||+|+.|++|+
T Consensus 484 ~~~~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~-~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~ 561 (611)
T 1nr0_A 484 EVKT-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANN-FELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVI 561 (611)
T ss_dssp EEEE-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGT-TEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeec-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCC-CceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEE
Confidence 1233 679999999999999999999999999999998641 12111112234778899999999999999999999999
Q ss_pred EEEccCCe-EE-EEeccc-CCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 324 IYNYRKGS-AL-AILKYH-HATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 324 iwd~~~~~-~~-~~~~~h-~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
+||+.+++ .+ ..+.+| ...|.+++|+|+++ |||++.|++|++|++
T Consensus 562 lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 562 VWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp EEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred EEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 99998765 33 567789 89999999999998 999999999999997
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.9e-38 Score=285.05 Aligned_cols=297 Identities=18% Similarity=0.258 Sum_probs=209.4
Q ss_pred CCeEEeecCCCceeEEEE-----eC-CCCEEEEecCCCcEEEEeCccc-------ceeeeeeeeeceeeeEEeccCCccc
Q 017296 9 DPVAVLRGHRASVTDVCF-----HQ-TKPILFAGTTGGELRIWDTVQH-------RTVSSSWVHSAAHGIVSVATGPSIG 75 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~-----~~-~~~~l~s~s~D~~v~vWd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (374)
++..+|+||++.|++|+| ++ ++++|+||+.|++|++||+.+. .+...+.+|. ..+.++++++ +
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~--~~V~~~~~~~--~ 87 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHN--HFVSDLALSQ--E 87 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCS--SCEEEEEECS--S
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCC--CceEEEEECC--C
Confidence 467889999999999999 66 8999999999999999998643 3344555665 3578888887 5
Q ss_pred cceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCC
Q 017296 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDD 155 (374)
Q Consensus 76 ~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (374)
+..+++++.|++||+||+++++.. ..+..+..... +..
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~----~~~~~h~~~v~--------------------~v~------------------ 125 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTY----KRFVGHQSEVY--------------------SVA------------------ 125 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEE----EEEECCCSCEE--------------------EEE------------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEE----EEEcCCCCcEE--------------------EEE------------------
Confidence 678999999999999999886421 01100000000 000
Q ss_pred CCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCC------CCceEEEEEec
Q 017296 156 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS------QGFVNVLAGYE 229 (374)
Q Consensus 156 ~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~gs~ 229 (374)
+.++ .. ++++++.|++|++||+.... ....... ..+ .....+ ..+.+... .....+++++.
T Consensus 126 ~sp~-~~-~l~s~~~d~~i~~wd~~~~~-~~~~~~~-----~~~--~~~v~~---~~~~~~~~~~~~~~~~~~~l~s~~~ 192 (343)
T 2xzm_R 126 FSPD-NR-QILSAGAEREIKLWNILGEC-KFSSAEK-----ENH--SDWVSC---VRYSPIMKSANKVQPFAPYFASVGW 192 (343)
T ss_dssp ECSS-TT-EEEEEETTSCEEEEESSSCE-EEECCTT-----TSC--SSCEEE---EEECCCCCSCSCCCSSCCEEEEEET
T ss_pred ECCC-CC-EEEEEcCCCEEEEEeccCCc-eeeeecc-----cCC--Cceeee---eeeccccccccccCCCCCEEEEEcC
Confidence 1112 23 34567789999999997432 2222110 001 111111 12332210 11136899999
Q ss_pred CCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCC
Q 017296 230 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD 309 (374)
Q Consensus 230 dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 309 (374)
||.|++||.. ......+.+|..+|.+++|+|++..+++++.|++|++||+........ ... +...+.+++|+|+
T Consensus 193 d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~---~~~-~~~~v~~v~~sp~ 266 (343)
T 2xzm_R 193 DGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR---EFD-AGSTINQIAFNPK 266 (343)
T ss_dssp TSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE---EEE-CSSCEEEEEECSS
T ss_pred CCEEEEEcCC--CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce---eec-CCCcEEEEEECCC
Confidence 9999999953 345667889999999999999999999999999999999943321111 111 2346999999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCeEEE--Eec-----------ccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 310 SKIAATAGWDRRVRIYNYRKGSALA--ILK-----------YHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 310 ~~~l~s~~~dg~v~iwd~~~~~~~~--~~~-----------~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
++++++ +.|+.|++||+.+++... .+. +|...|.+++|+|+|++||+|+.|++|++|++..
T Consensus 267 ~~~la~-~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 267 LQWVAV-GTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp SCEEEE-EESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred CCEEEE-ECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 988775 468899999998765433 343 6888999999999999999999999999999854
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-37 Score=281.16 Aligned_cols=304 Identities=16% Similarity=0.197 Sum_probs=205.7
Q ss_pred CCCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccc--eeeee-ee-eeceeeeEEeccCCccccceeeec
Q 017296 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSS-WV-HSAAHGIVSVATGPSIGLNKVISQ 82 (374)
Q Consensus 7 ~~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~--~~~~~-~~-~~~~~~~~~~~~~~~~~~~~l~s~ 82 (374)
..+++.+|++|+++|++++|+++ +|+||+.|++|++||+..+. .+..+ .. |. ..+.+++|++ ++++|+++
T Consensus 3 ~~~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~--~~v~~v~~sp--~~~~las~ 76 (330)
T 2hes_X 3 SINLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHK--KAIRSVAWRP--HTSLLAAG 76 (330)
T ss_dssp CCEEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCC--SCEEEEEECT--TSSEEEEE
T ss_pred ccccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCcc--CCEEEEEECC--CCCEEEEE
Confidence 34578899999999999999987 99999999999999997653 33333 12 43 3588899987 56899999
Q ss_pred cccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCc
Q 017296 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (374)
Q Consensus 83 ~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (374)
+.|++|++||+..+.........+.....|...+ .+. .+.++ +.
T Consensus 77 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V-----------------~~v------------------~~sp~-g~ 120 (330)
T 2hes_X 77 SFDSTVSIWAKEESADRTFEMDLLAIIEGHENEV-----------------KGV------------------AWSND-GY 120 (330)
T ss_dssp ETTSCEEEEEC-------CCCEEEEEEC----CE-----------------EEE------------------EECTT-SC
T ss_pred eCCCcEEEEEcccCcCccccceeEEEEcCCCCcE-----------------EEE------------------EECCC-CC
Confidence 9999999999964311000000000000000000 000 01112 23
Q ss_pred eEEEcccCCCeEEEEecCCC----ceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEec
Q 017296 163 YMAVAGEQLSEVEIWDLNTA----ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl 238 (374)
++++++.|++|++||++.. +++..+..+ . ....+ ..+.|+ ...+++|+.|++|++||+
T Consensus 121 -~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h--------~--~~v~~---v~~~p~----~~~l~s~s~D~~i~iW~~ 182 (330)
T 2hes_X 121 -YLATCSRDKSVWIWETDESGEEYECISVLQEH--------S--QDVKH---VIWHPS----EALLASSSYDDTVRIWKD 182 (330)
T ss_dssp -EEEEEETTSCEEEEECCTTCCCCEEEEEECCC--------S--SCEEE---EEECSS----SSEEEEEETTSCEEEEEE
T ss_pred -EEEEEeCCCEEEEEeccCCCCCeEEEEEeccC--------C--CceEE---EEECCC----CCEEEEEcCCCeEEEEEC
Confidence 4667788999999999532 233333321 1 11111 134432 236999999999999998
Q ss_pred cCCC-CceeeeecCccCeEEEEEecC--CCceEEEecCCeEEEEEcCCCCC----eEEEEEeee-cCCCCeEEEEECCCC
Q 017296 239 RNPG-IPLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHSTG----SCVIKKEIN-LERPGISGTSIRPDS 310 (374)
Q Consensus 239 ~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~~~s~s~D~~i~lwd~~~~~~----~~~~~~~~~-~~~~~v~~~~~sp~~ 310 (374)
+... .++..+.+|...|.++.|+++ +..+++++.|++|++||++.... .......+. .|...|.+++|+|++
T Consensus 183 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~ 262 (330)
T 2hes_X 183 YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG 262 (330)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS
T ss_pred CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC
Confidence 7532 356778899999999999987 56789999999999999864211 111122222 266789999999766
Q ss_pred CEEEEEeCCCeEEEEEccCCe--EEEE-ecccCC-ceEEEEEeC--CCCEEEEEeCCCcEEEecCCC
Q 017296 311 KIAATAGWDRRVRIYNYRKGS--ALAI-LKYHHA-TCNAVSFSS--DCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 311 ~~l~s~~~dg~v~iwd~~~~~--~~~~-~~~h~~-~v~~v~~sp--~~~~las~s~D~~v~~W~~~~ 371 (374)
+|++++.||+|++||..+++ .+.. +.+|.. .|.+++|+| ++++|||||.|++|+||++..
T Consensus 263 -~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 263 -LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp -CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred -EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 78999999999999998774 3333 357887 899999999 788999999999999999864
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.1e-38 Score=306.54 Aligned_cols=312 Identities=17% Similarity=0.244 Sum_probs=214.0
Q ss_pred CCeEEeecCCCceeEEEEeCCCC-EEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~-~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
++...+.||.+.|++++|+|++. +|+||+.|++|++||..+++++..+.+|.. .+.+++|++ ++++|+|++.|++
T Consensus 138 ~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~--~V~~v~fsp--dg~~las~s~D~~ 213 (611)
T 1nr0_A 138 TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK--FVHSVRYNP--DGSLFASTGGDGT 213 (611)
T ss_dssp CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS--CEEEEEECT--TSSEEEEEETTSC
T ss_pred CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC--ceEEEEECC--CCCEEEEEECCCc
Confidence 34567899999999999999987 699999999999999988888878877763 488899988 6789999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
||+||+.+++... .+.... . . ... + .+.+.. ..+.++ ++ ++++
T Consensus 214 i~lwd~~~g~~~~----~~~~~~------------~-~--~~~--h------~~~V~~--------v~~spd-g~-~l~s 256 (611)
T 1nr0_A 214 IVLYNGVDGTKTG----VFEDDS------------L-K--NVA--H------SGSVFG--------LTWSPD-GT-KIAS 256 (611)
T ss_dssp EEEEETTTCCEEE----ECBCTT------------S-S--SCS--S------SSCEEE--------EEECTT-SS-EEEE
T ss_pred EEEEECCCCcEee----eecccc------------c-c--ccc--c------CCCEEE--------EEECCC-CC-EEEE
Confidence 9999998764210 000000 0 0 000 0 000000 001112 22 3456
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCC---------------------------------CcCCCCCcceeEEEeee
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSP---------------------------------NFSSKGRGMCMAVQAYL 214 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~~~~~ 214 (374)
++.|++|++||+++++++..+......... ...+.... ....+.
T Consensus 257 ~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v---~~l~~s 333 (611)
T 1nr0_A 257 ASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAI---TALSSS 333 (611)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCE---EEEEEC
T ss_pred EeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCE---EEEEEe
Confidence 667788888888877765554321000000 00000011 111233
Q ss_pred cCCCCCceEEEEEecCCcEEEEeccCCCCceeee-e--------------------------------------------
Q 017296 215 PSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM-K-------------------------------------------- 249 (374)
Q Consensus 215 ~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~-~-------------------------------------------- 249 (374)
++ ...+++++.|++|++||+.+... ...+ .
T Consensus 334 pd----g~~l~s~s~D~~v~~Wd~~~~~~-~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~ 408 (611)
T 1nr0_A 334 AD----GKTLFSADAEGHINSWDISTGIS-NRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVAN 408 (611)
T ss_dssp TT----SSEEEEEETTSCEEEEETTTCCE-EECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEE
T ss_pred CC----CCEEEEEeCCCcEEEEECCCCce-eeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeee
Confidence 32 23688899999999999864211 0000 0
Q ss_pred -------------------------------------cCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEE
Q 017296 250 -------------------------------------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK 292 (374)
Q Consensus 250 -------------------------------------~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~ 292 (374)
.|...+.+++|+|++..+++|+.|++|++||++... .....
T Consensus 409 ~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~--~~~~~ 486 (611)
T 1nr0_A 409 KLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGAS--VSEVK 486 (611)
T ss_dssp ECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTE--EEEEE
T ss_pred ecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCc--eeeee
Confidence 123457788999999999999999999999996532 21112
Q ss_pred eeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccC-CeEEEE--ecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 293 EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRK-GSALAI--LKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 293 ~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~-~~~~~~--~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
. ..|...|.+++|+||+++|++++.|++|++||+.+ ++.+.. +.+|...|++++|+|||++|||+|.|++|++|++
T Consensus 487 ~-~~h~~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~ 565 (611)
T 1nr0_A 487 T-IVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNM 565 (611)
T ss_dssp E-EECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred c-cCCCCceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEEC
Confidence 2 45677899999999999999999999999999987 665443 3459999999999999999999999999999999
Q ss_pred CCC
Q 017296 370 YPP 372 (374)
Q Consensus 370 ~~~ 372 (374)
..+
T Consensus 566 ~~~ 568 (611)
T 1nr0_A 566 NKP 568 (611)
T ss_dssp TCT
T ss_pred CCc
Confidence 754
No 18
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.7e-37 Score=275.46 Aligned_cols=259 Identities=17% Similarity=0.225 Sum_probs=196.6
Q ss_pred eEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcc--cceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ--HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 11 ~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
+.++.+|.+.|++++|+++|++|+||+.|++|+|||+.. .+.+..+.+|.. .|.+++|++..+++.|+||+.|++|
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~--~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEG--PVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSS--CEEEEEECCGGGCSEEEEEETTTEE
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccC--CeEEEEecCCCcCCEEEEEcCCCEE
Confidence 467899999999999999999999999999999999864 356677777763 4888888764446899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
|+||+++++... ... ..+
T Consensus 80 ~iWd~~~~~~~~--~~~------------------------------------------------------------~~~ 97 (297)
T 2pm7_B 80 MIWKEENGRWSQ--IAV------------------------------------------------------------HAV 97 (297)
T ss_dssp EEEEBSSSCBCC--CEE------------------------------------------------------------ECC
T ss_pred EEEEcCCCceEE--EEE------------------------------------------------------------eec
Confidence 999998653100 000 000
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC-ceee
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI-PLTA 247 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~-~~~~ 247 (374)
....| .. ..+.++. ....+++|+.||+|++||++.... ....
T Consensus 98 -h~~~v-----------~~-----------------------v~~~p~~--~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 140 (297)
T 2pm7_B 98 -HSASV-----------NS-----------------------VQWAPHE--YGPMLLVASSDGKVSVVEFKENGTTSPII 140 (297)
T ss_dssp -CSSCE-----------EE-----------------------EEECCGG--GCSEEEEEETTSEEEEEEBCSSSCBCCEE
T ss_pred -CCCce-----------eE-----------------------EEeCcCC--CCcEEEEEECCCcEEEEEecCCCceeeee
Confidence 00000 00 0111110 012588899999999999976422 2355
Q ss_pred eecCccCeEEEEEecC-------------CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCC---C
Q 017296 248 MKVHLEPVLCLSIDES-------------CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS---K 311 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~-------------~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~---~ 311 (374)
+.+|...|.+++|+|. +..+++|+.|++|++||++...........+..|...|.+++|+|++ +
T Consensus 141 ~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~ 220 (297)
T 2pm7_B 141 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 220 (297)
T ss_dssp EECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred eecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCce
Confidence 7789999999999876 45799999999999999976544444445667788899999999984 8
Q ss_pred EEEEEeCCCeEEEEEccCCe---EEEEe--cccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 312 IAATAGWDRRVRIYNYRKGS---ALAIL--KYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 312 ~l~s~~~dg~v~iwd~~~~~---~~~~~--~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
+||+++.|++|++||+.+++ ....+ ..|...|.+++|+|+|++||+++.|++|+||+..
T Consensus 221 ~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 221 YMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 99999999999999997642 12233 4688899999999999999999999999999875
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-36 Score=275.71 Aligned_cols=303 Identities=17% Similarity=0.230 Sum_probs=224.5
Q ss_pred CeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEE
Q 017296 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vr 89 (374)
....|.+|.++|++|+|+|++++|++|+.|+.|++||+.+++.+..+..|.. .+.++++++ ++++|++++.|++|+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~~--~~~~l~s~~~dg~i~ 99 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTG--TIWSIDVDC--FTKYCVTGSADYSIK 99 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSS--CEEEEEECT--TSSEEEEEETTTEEE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCC--cEEEEEEcC--CCCEEEEEeCCCeEE
Confidence 4467899999999999999999999999999999999999988888877753 478888887 568999999999999
Q ss_pred EEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEccc
Q 017296 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE 169 (374)
Q Consensus 90 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (374)
+||+.+++... ... ...... +.. +.+ +..++ +++.
T Consensus 100 iwd~~~~~~~~----~~~-~~~~v~--------------------~~~------------------~~~-~~~~l-~~~~ 134 (369)
T 3zwl_B 100 LWDVSNGQCVA----TWK-SPVPVK--------------------RVE------------------FSP-CGNYF-LAIL 134 (369)
T ss_dssp EEETTTCCEEE----EEE-CSSCEE--------------------EEE------------------ECT-TSSEE-EEEE
T ss_pred EEECCCCcEEE----Eee-cCCCeE--------------------EEE------------------Ecc-CCCEE-EEec
Confidence 99998764211 000 000000 000 111 22333 3444
Q ss_pred CC-----CeEEEEecCCCceeEEeccCccCCCC-CcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC
Q 017296 170 QL-----SEVEIWDLNTAERCTRLHQNSCGGSP-NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (374)
Q Consensus 170 ~d-----~~i~vWd~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~ 243 (374)
.+ +.|++||++++.....+......... ......... .....+.+ ....+++++.||.|++||++....
T Consensus 135 ~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~----~~~~l~~~~~dg~i~i~d~~~~~~ 209 (369)
T 3zwl_B 135 DNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDA-ATVAGWST----KGKYIIAGHKDGKISKYDVSNNYE 209 (369)
T ss_dssp CCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCC-EEEEEECG----GGCEEEEEETTSEEEEEETTTTTE
T ss_pred CCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccc-eeEEEEcC----CCCEEEEEcCCCEEEEEECCCCcE
Confidence 45 89999999876532222110000000 000000001 11112333 223688999999999999987556
Q ss_pred ceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCC---
Q 017296 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR--- 320 (374)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg--- 320 (374)
....+..|..+|.++.|++++..+++++.|+.|++||++... ... .+. +...+..++|+|+++++++++.++
T Consensus 210 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~--~~~--~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~ 284 (369)
T 3zwl_B 210 YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ--VLK--KYE-TDCPLNTAVITPLKEFIILGGGQEAKD 284 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC--EEE--EEE-CSSCEEEEEECSSSSEEEEEECCC---
T ss_pred eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCc--eee--eec-CCCCceeEEecCCCceEEEeecCCCce
Confidence 677888899999999999999999999999999999997543 222 222 446799999999999999999998
Q ss_pred -----------eEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 321 -----------RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 321 -----------~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
.+++||..+++.+..+.+|...|.+++|+|++++|++++.|++|++|++..
T Consensus 285 ~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 285 VTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp ----------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred EEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 899999999999999999999999999999999999999999999999853
No 20
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=4.4e-37 Score=282.12 Aligned_cols=299 Identities=12% Similarity=0.102 Sum_probs=200.6
Q ss_pred CCceeEEEEeCCCCEEEEecCCC-------cEEEEeCcccceee----------eeeeeeceeeeEEeccCC-------c
Q 017296 18 RASVTDVCFHQTKPILFAGTTGG-------ELRIWDTVQHRTVS----------SSWVHSAAHGIVSVATGP-------S 73 (374)
Q Consensus 18 ~~~V~~l~~~~~~~~l~s~s~D~-------~v~vWd~~~~~~~~----------~~~~~~~~~~~~~~~~~~-------~ 73 (374)
.-||++++|+|++++|++||.|. .|++|++..+.... .+..|. ..+++++++. .
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~--~~v~s~~~~~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDND--DSPTAIDASKGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTS--CCCCEEEEETTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCC--CceEEEEeCCCEEEEEEC
Confidence 45899999999999999997654 59999976543211 111111 1244444322 1
Q ss_pred cccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCC
Q 017296 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK 153 (374)
Q Consensus 74 ~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (374)
.+...+++++.|+++|+|++..+.. .... ..... .. ...... ..+..
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~----~~~~---------~~~~~--~~---~~~~~~--------~~~~~------- 138 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVND----QLEF---------LTSVD--FD---ASTNAD--------DYTKL------- 138 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTT----EEEE---------EEEEC--SS---CCCCTT--------CCEEE-------
T ss_pred CCccEEEEecCCCcEEEEEecCCCc----eEEE---------eeeec--ee---ecCCcc--------cCEEE-------
Confidence 1223456677889999999876421 0000 00000 00 000000 00000
Q ss_pred CCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcE
Q 017296 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 233 (374)
Q Consensus 154 ~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i 233 (374)
..+.++++.+.+++++.|++|+|||+++++.+..+.... ....+ .|.|+ + ..+++++.+ .+
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~-----------~V~~v---~fspd---g-~~l~s~s~~-~~ 199 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG-----------EVKDL---HFSTD---G-KVVAYITGS-SL 199 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSS-----------CCCEE---EECTT---S-SEEEEECSS-CE
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCC-----------ceEEE---EEccC---C-ceEEeccce-eE
Confidence 012344444445677789999999999998877764221 11111 34443 2 257777754 56
Q ss_pred EEEeccCCCCc-eeeeecCccCeEEEEEecCCCceEEEecCC----eEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECC
Q 017296 234 LVWDIRNPGIP-LTAMKVHLEPVLCLSIDESCNGGISGGADQ----KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 308 (374)
Q Consensus 234 ~iwdl~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~----~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 308 (374)
++|+....... ......|...|.+++|+|++..+++++.|+ .+++|++............+..|...|++++|+|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp 279 (365)
T 4h5i_A 200 EVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM 279 (365)
T ss_dssp EEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT
T ss_pred EEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECC
Confidence 66666543322 234567889999999999999999999887 6888988654433333445666778899999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCeEEEEe-cccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 309 DSKIAATAGWDRRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 309 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
|+++||+|+.|++|+|||+++++++.++ .+|...|++|+|+|||++|||+|.|++||||++-
T Consensus 280 dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 280 KGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp TSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 9999999999999999999999999875 7899999999999999999999999999999984
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.8e-36 Score=291.15 Aligned_cols=285 Identities=22% Similarity=0.348 Sum_probs=218.2
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
.+++..+.+|...|++++|+|++++|++++.|++|++||.. ++.+..+.+|. ..+.++++++ +++.+++++.|++
T Consensus 293 ~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~-~~~~~~~~~~~--~~v~~~~~s~--~g~~l~~~~~dg~ 367 (577)
T 2ymu_A 293 GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQHLQTLTGHS--SSVWGVAFSP--DGQTIASASDDKT 367 (577)
T ss_dssp SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCS--SCEEEEEECT--TSSEEEEEETTSE
T ss_pred CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCC-CCeeEEEeCCC--CCEEEEEECC--CCCEEEEEeCCCE
Confidence 35677889999999999999999999999999999999975 44555666664 3577888887 6789999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|++||.. ++.. ..+........ +. .+.+ ++++ +++
T Consensus 368 v~~~~~~-~~~~----~~~~~~~~~v~--------------------~~------------------~~s~-dg~~-l~~ 402 (577)
T 2ymu_A 368 VKLWNRN-GQLL----QTLTGHSSSVR--------------------GV------------------AFSP-DGQT-IAS 402 (577)
T ss_dssp EEEEETT-CCEE----EEEECCSSCEE--------------------EE------------------EECT-TSSC-EEE
T ss_pred EEEEcCC-CCEE----EEecCCCCCeE--------------------EE------------------EECC-CCCE-EEE
Confidence 9999964 2210 00000000000 00 0111 2233 456
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
++.|+.|++||. +++.+..+..+. ....+ ..|.++ ...+++++.|++|++||+. ...+..
T Consensus 403 ~~~d~~v~~~~~-~~~~~~~~~~~~----------~~v~~---~~~s~d----~~~l~~~~~d~~v~~w~~~--~~~~~~ 462 (577)
T 2ymu_A 403 ASDDKTVKLWNR-NGQLLQTLTGHS----------SSVWG---VAFSPD----DQTIASASDDKTVKLWNRN--GQLLQT 462 (577)
T ss_dssp EETTSEEEEECT-TCCEEEEEECCS----------SCEEE---EEECTT----SSEEEEEETTSEEEEEETT--SCEEEE
T ss_pred EeCCCEEEEEeC-CCCEEEEecCCC----------CCeEE---EEECCC----CCEEEEEcCCCEEEEEECC--CCEEEE
Confidence 677899999995 455555554321 11111 134433 2368999999999999974 456778
Q ss_pred eecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEc
Q 017296 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 327 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~ 327 (374)
+.+|..+|.+++|+|++..+++++.|++|++||... .+ ...+..|...|.+++|+|++++|++++.||+|++||.
T Consensus 463 ~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~~---~~--~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 463 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QL--LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEETTSEEEEEETTS---CE--EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCCC---CE--EEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 889999999999999999999999999999999642 22 2345667788999999999999999999999999996
Q ss_pred cCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 328 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 328 ~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
+++.+.++.+|.+.|++++|+|||++|+|+|.|++|++||
T Consensus 538 -~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 538 -NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp -TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 7888999999999999999999999999999999999997
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-35 Score=288.03 Aligned_cols=301 Identities=23% Similarity=0.338 Sum_probs=218.7
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
++...|+||++.|++|+|+|+|++|+||+.|++|+|||. +++++..+.+|. ..|.+++|++ ++++|++++.|++|
T Consensus 7 ~e~~~L~GH~~~V~~~a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~--~~V~~l~fsp--dg~~las~~~d~~i 81 (577)
T 2ymu_A 7 KERNRLEAHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS--SSVWGVAFSP--DGQTIASASDDKTV 81 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCS--SCEEEEEECT--TSSEEEEEETTSCE
T ss_pred EEeeEECCCCCcEEEEEECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCC--CCEEEEEECC--CCCEEEEEeCCCEE
Confidence 456789999999999999999999999999999999995 678888888886 4588999988 67899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||.. ++. ...+..+......+ .+.+ +.+ +++++
T Consensus 82 ~vWd~~-~~~----~~~~~~~~~~v~~~--------------------------------------~~s~-d~~-~l~~~ 116 (577)
T 2ymu_A 82 KLWNRN-GQL----LQTLTGHSSSVRGV--------------------------------------AFSP-DGQ-TIASA 116 (577)
T ss_dssp EEEETT-SCE----EEEECCCSSCEEEE--------------------------------------EECT-TSS-EEEEE
T ss_pred EEEECC-CCE----EEEEECCCCCEEEE--------------------------------------EECC-CCC-EEEEE
Confidence 999964 321 00110000000000 0111 223 34566
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcc---------------------------eeEEEeeecCCCCCc
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGM---------------------------CMAVQAYLPSKSQGF 221 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~ 221 (374)
+.|+.+++|+....................+.+....+ .+....+.+ ..
T Consensus 117 ~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~ 192 (577)
T 2ymu_A 117 SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSP----DG 192 (577)
T ss_dssp ETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECT----TS
T ss_pred cCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecC----CC
Confidence 77889999987654322111100000000000000000 000011222 12
Q ss_pred eEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCe
Q 017296 222 VNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 301 (374)
Q Consensus 222 ~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v 301 (374)
..+++++.||.|++||.. ...+..+.+|..+|.+++|++++..+++++.|+.|++||.+. .. ...+..|...+
T Consensus 193 ~~l~~~~~d~~v~~w~~~--~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~---~~--~~~~~~~~~~v 265 (577)
T 2ymu_A 193 QTIASASDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG---QL--LQTLTGHSSSV 265 (577)
T ss_dssp SCEEEEETTSEEEEECTT--SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS---CE--EEEECCCSSCE
T ss_pred CEEEEEcCCCEEEEEeCC--CcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCC---CE--EEEEecCCCCE
Confidence 358899999999999964 456778889999999999999999999999999999999753 22 23455677889
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 302 SGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 302 ~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
.+++|+|+++++++++.|++|++||. +++.+..+.+|...|.+++|+|++++|++++.|++|++|++..
T Consensus 266 ~~v~~~~d~~~l~~~~~d~~i~~w~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~ 334 (577)
T 2ymu_A 266 NGVAFRPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG 334 (577)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEET-TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTS
T ss_pred EEEEEcCCCCEEEEEeCCCEEEEEeC-CCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 99999999999999999999999996 5677888999999999999999999999999999999999754
No 23
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.1e-35 Score=295.27 Aligned_cols=295 Identities=16% Similarity=0.275 Sum_probs=210.6
Q ss_pred CCeEEeecCCCceeEEEEeCCC-CEEEEecCCCcEEEEeCcccc-----eeeeeeeeeceeeeEEeccCCccccceeeec
Q 017296 9 DPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHR-----TVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~-~~l~s~s~D~~v~vWd~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 82 (374)
+....|++|++.|++|+|++++ ++|+|||.|++|++||+.+.. ....+.+|. ..+.++++++ ++++|+||
T Consensus 373 ~~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~--~~v~~v~~s~--~g~~l~sg 448 (694)
T 3dm0_A 373 VLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHS--HFVEDVVLSS--DGQFALSG 448 (694)
T ss_dssp EEEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCS--SCEEEEEECT--TSSEEEEE
T ss_pred chhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCC--CcEEEEEECC--CCCEEEEE
Confidence 3456799999999999999865 799999999999999986542 234555665 4578888887 67899999
Q ss_pred cccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCc
Q 017296 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (374)
Q Consensus 83 ~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (374)
+.|++||+||+.++... .....|...+ .+.. +.+++ .
T Consensus 449 s~Dg~v~vwd~~~~~~~-------~~~~~h~~~v-----------------~~~~------------------~s~~~-~ 485 (694)
T 3dm0_A 449 SWDGELRLWDLAAGVST-------RRFVGHTKDV-----------------LSVA------------------FSLDN-R 485 (694)
T ss_dssp ETTSEEEEEETTTTEEE-------EEEECCSSCE-----------------EEEE------------------ECTTS-S
T ss_pred eCCCcEEEEECCCCcce-------eEEeCCCCCE-----------------EEEE------------------EeCCC-C
Confidence 99999999999876321 1100010000 0000 11111 2
Q ss_pred eEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC
Q 017296 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~ 242 (374)
.+++++.|++|++||+...... .+... ...+.....+ ..+.++.. ...+++|+.||+|++||++. .
T Consensus 486 -~l~s~s~D~~i~iwd~~~~~~~-~~~~~------~~~h~~~v~~---~~~~~~~~--~~~l~s~s~d~~v~vwd~~~-~ 551 (694)
T 3dm0_A 486 -QIVSASRDRTIKLWNTLGECKY-TISEG------GEGHRDWVSC---VRFSPNTL--QPTIVSASWDKTVKVWNLSN-C 551 (694)
T ss_dssp -CEEEEETTSCEEEECTTSCEEE-EECSS------TTSCSSCEEE---EEECSCSS--SCEEEEEETTSCEEEEETTT-C
T ss_pred -EEEEEeCCCEEEEEECCCCcce-eeccC------CCCCCCcEEE---EEEeCCCC--cceEEEEeCCCeEEEEECCC-C
Confidence 3567788999999998654332 22111 0011111122 23443321 23689999999999999986 4
Q ss_pred CceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeE
Q 017296 243 IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 322 (374)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v 322 (374)
.....+.+|...|.+++|+|++..+++++.|++|++||+... .... .+. +...+.+++|+|++.++++++ |+.|
T Consensus 552 ~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~--~~~~--~~~-~~~~v~~~~~sp~~~~l~~~~-~~~i 625 (694)
T 3dm0_A 552 KLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEG--KKLY--SLE-ANSVIHALCFSPNRYWLCAAT-EHGI 625 (694)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTT--EEEE--CCB-CSSCEEEEEECSSSSEEEEEE-TTEE
T ss_pred cEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCC--ceEE--Eec-CCCcEEEEEEcCCCcEEEEEc-CCCE
Confidence 456778899999999999999999999999999999999653 3322 222 234699999999998877665 6779
Q ss_pred EEEEccCCeEEEEecccC-------------------CceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 323 RIYNYRKGSALAILKYHH-------------------ATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 323 ~iwd~~~~~~~~~~~~h~-------------------~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
++||+.+++.+..+..+. ..+.+++|+|||++|+|||.|++|++|++.
T Consensus 626 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 626 KIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 999999998877665332 137899999999999999999999999985
No 24
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.8e-35 Score=261.76 Aligned_cols=298 Identities=18% Similarity=0.210 Sum_probs=215.1
Q ss_pred CCCCCCCeEEeec--CCC--ceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCcccccee
Q 017296 4 RPPPPDPVAVLRG--HRA--SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV 79 (374)
Q Consensus 4 ~~~~~~~~~~l~g--H~~--~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (374)
|.-|..|.++|.. ..+ ..++|+||+++ +|++| .|++|+|||+.+++.+..+..|.+...|.++++++ +++++
T Consensus 7 r~~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~--~~~~l 82 (318)
T 4ggc_A 7 RYIPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK--EGNYL 82 (318)
T ss_dssp CCCCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT--TSSEE
T ss_pred cccCCCCCEEeeCCCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECC--CCCEE
Confidence 5566778888863 333 35789999875 66665 59999999999999887777665556688999987 67899
Q ss_pred eeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCC
Q 017296 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAE 159 (374)
Q Consensus 80 ~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (374)
++|+.|++|++||+++++.. .....|.... .... .
T Consensus 83 ~sgs~Dg~v~iw~~~~~~~~-------~~~~~h~~~~-------------------~~~~-------------------~ 117 (318)
T 4ggc_A 83 AVGTSSAEVQLWDVQQQKRL-------RNMTSHSARV-------------------GSLS-------------------W 117 (318)
T ss_dssp EEEETTSEEEEEETTTTEEE-------EEEECCSSCE-------------------EEEE-------------------E
T ss_pred EEEECCCcEEEeecCCceeE-------EEecCccceE-------------------EEee-------------------c
Confidence 99999999999999887421 1111110000 0000 0
Q ss_pred CCceEEEcccCCCeEEEEecCCCce-eEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEec
Q 017296 160 GPKYMAVAGEQLSEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (374)
Q Consensus 160 ~~~~~~~~~~~d~~i~vWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl 238 (374)
. ..++++++.++.+++|+..+... +..+..+. ....+ ..+.+ ....+++++.||+|++||+
T Consensus 118 ~-~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~---~~~~~----~~~~l~s~~~d~~i~iwd~ 179 (318)
T 4ggc_A 118 N-SYILSSGSRSGHIHHHDVRVAEHHVATLSGHS----------QEVCG---LRWAP----DGRHLASGGNDNLVNVWPS 179 (318)
T ss_dssp E-TTEEEEEETTSEEEEEETTSSSCEEEEEECCS----------SCEEE---EEECT----TSSEEEEEETTSCEEEEES
T ss_pred C-CCEEEEEecCCceEeeecCCCceeEEEEcCcc----------CceEE---EEEcC----CCCEEEEEecCcceeEEEC
Confidence 0 12466788889999999887653 33333211 11111 11222 2236899999999999999
Q ss_pred cCCCC---ceeeeecCccCeEEEEEecCCCce---EEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCE
Q 017296 239 RNPGI---PLTAMKVHLEPVLCLSIDESCNGG---ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 312 (374)
Q Consensus 239 ~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~---~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 312 (374)
++... .......|..+|.++.+.+....+ ++++.+++|++||........ ...+...+..+.|+|+++.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~-----~~~~~~~v~~~~~~~~~~~ 254 (318)
T 4ggc_A 180 APGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS-----AVDAHSQVCSILWSPHYKE 254 (318)
T ss_dssp SCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEE-----EEECSSCEEEEEEETTTTE
T ss_pred CCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccc-----cccceeeeeeeeecccccc
Confidence 75432 234455678899999997765543 467789999999986543211 1224456889999999998
Q ss_pred EEEEe--CCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCCC
Q 017296 313 AATAG--WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPPH 373 (374)
Q Consensus 313 l~s~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~~ 373 (374)
+++++ .|++|++||+.+++++.++.+|.+.|.+++|+|||++|||||.|++|+|||+++++
T Consensus 255 ~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 255 LISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred eEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 77654 79999999999999999999999999999999999999999999999999998765
No 25
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.2e-35 Score=274.76 Aligned_cols=314 Identities=12% Similarity=0.173 Sum_probs=222.8
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccc------eeeeeeeeeceeeeEEeccCCc--ccc---c
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR------TVSSSWVHSAAHGIVSVATGPS--IGL---N 77 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~------~~~~~~~~~~~~~~~~~~~~~~--~~~---~ 77 (374)
+...++++|.++|++|+|+| ++|++|+.|++|++||+.+++ .+..+..|. ..+.++++++. .++ +
T Consensus 7 ~~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~g~~~~ 82 (397)
T 1sq9_A 7 ATANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHK--SGLHHVDVLQAIERDAFELC 82 (397)
T ss_dssp EEEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCT--TCEEEEEEEEEEETTTEEEE
T ss_pred hhhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCC--CcEEEEEEecccccCCcccc
Confidence 45678899999999999988 899999999999999998877 566666665 34788888762 116 7
Q ss_pred eeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCC
Q 017296 78 KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVP 157 (374)
Q Consensus 78 ~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (374)
.|++++.|++|++||+.+++.... ..+.....+. .... .....+..+.. ..
T Consensus 83 ~l~s~~~dg~i~iw~~~~~~~~~~--~~~~~~~~~~-------~~~~-----~~~v~~~~~~~---------------~~ 133 (397)
T 1sq9_A 83 LVATTSFSGDLLFYRITREDETKK--VIFEKLDLLD-------SDMK-----KHSFWALKWGA---------------SN 133 (397)
T ss_dssp EEEEEETTSCEEEEEEEECTTTCC--EEEEEECCSC-------TTGG-----GSCEEEEEEEC---------------CC
T ss_pred EEEEEcCCCCEEEEEccCCccccc--ccceeecccc-------cccC-----CCcEEEEEEee---------------cc
Confidence 899999999999999987643110 0000000000 0000 00000000000 00
Q ss_pred CCCCceEEEcccCCCeEEEEecCC------CceeE-----EeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEE
Q 017296 158 AEGPKYMAVAGEQLSEVEIWDLNT------AERCT-----RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (374)
Q Consensus 158 ~~~~~~~~~~~~~d~~i~vWd~~~------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (374)
.++..+++++++.|+.|++||+++ ++.+. .+...... .........++ .+.+ .+ .+++
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~---~~~~---~~--~l~~ 202 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVES---PMTPSQFATSV---DISE---RG--LIAT 202 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECC---SSSSCCCCCEE---EECT---TS--EEEE
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeecc---ccCCCCCceEE---EECC---Cc--eEEE
Confidence 012234266777889999999988 55443 33210000 00011112222 2332 23 6899
Q ss_pred EecCCcEEEEeccCCCCceeeeec---C---ccCeEEEEEecCCCceEEEecC---CeEEEEEcCCCCCeEEEEEeeec-
Q 017296 227 GYEDGSILVWDIRNPGIPLTAMKV---H---LEPVLCLSIDESCNGGISGGAD---QKIVLYNLDHSTGSCVIKKEINL- 296 (374)
Q Consensus 227 gs~dg~i~iwdl~~~~~~~~~~~~---h---~~~v~~~~~~~~~~~~~s~s~D---~~i~lwd~~~~~~~~~~~~~~~~- 296 (374)
++.||.|++||++. ..++..+.. | ..+|.++.|++++..+++++.| +.|++||++... .. ..+..
T Consensus 203 ~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~--~~--~~~~~~ 277 (397)
T 1sq9_A 203 GFNNGTVQISELST-LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGE--RI--GSLSVP 277 (397)
T ss_dssp ECTTSEEEEEETTT-TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCC--EE--EEECBC
T ss_pred EeCCCcEEEEECCC-CceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCc--cc--ceeccC
Confidence 99999999999986 456777788 8 9999999999999999999999 999999997543 22 23334
Q ss_pred ------------CCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEec------cc---------------CCce
Q 017296 297 ------------ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK------YH---------------HATC 343 (374)
Q Consensus 297 ------------~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~------~h---------------~~~v 343 (374)
|...+.+++|+|++++|++++.||+|++||+.+++.+..+. +| ...|
T Consensus 278 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v 357 (397)
T 1sq9_A 278 THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGV 357 (397)
T ss_dssp --------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCE
T ss_pred cccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCce
Confidence 66789999999999999999999999999999999999998 88 8999
Q ss_pred EEEEEeCCC----------CEEEEEeCCCcEEEecCCC
Q 017296 344 NAVSFSSDC----------KLMASASEDSTVALWELYP 371 (374)
Q Consensus 344 ~~v~~sp~~----------~~las~s~D~~v~~W~~~~ 371 (374)
.+++|+|++ ++|++++.|+.|++|++..
T Consensus 358 ~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 358 FDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred eEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 999999998 7999999999999999864
No 26
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-34 Score=258.42 Aligned_cols=294 Identities=16% Similarity=0.206 Sum_probs=218.0
Q ss_pred CCCCCC-CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeee
Q 017296 3 KRPPPP-DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVIS 81 (374)
Q Consensus 3 ~~~~~~-~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 81 (374)
+.|... ++..+|++|.++|++++| +++++|++|+.|+.|++||+.+++....+..|. ..+.++++++ +++.+++
T Consensus 2 ~d~~~~~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~ 76 (313)
T 3odt_A 2 IDPFTGYQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ--GFLNSVCYDS--EKELLLF 76 (313)
T ss_dssp ---CCCCEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECS--SCEEEEEEET--TTTEEEE
T ss_pred CCccccHHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCC--ccEEEEEECC--CCCEEEE
Confidence 344444 688999999999999999 999999999999999999998887777766664 4588888887 6689999
Q ss_pred ccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCC
Q 017296 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGP 161 (374)
Q Consensus 82 ~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (374)
++.|+.+++|++....... +.............+ . + .+
T Consensus 77 ~~~dg~i~~~~~~~~~~~~-~~~~~~~~~~~i~~~--------------------~------------------~---~~ 114 (313)
T 3odt_A 77 GGKDTMINGVPLFATSGED-PLYTLIGHQGNVCSL--------------------S------------------F---QD 114 (313)
T ss_dssp EETTSCEEEEETTCCTTSC-C-CEECCCSSCEEEE--------------------E------------------E---ET
T ss_pred ecCCCeEEEEEeeecCCCC-cccchhhcccCEEEE--------------------E------------------e---cC
Confidence 9999999999997642110 000000000000000 0 0 11
Q ss_pred ceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCC
Q 017296 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (374)
Q Consensus 162 ~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~ 241 (374)
. ++++++.|+.|++|| .++....+..+ .....++ .+.+. ....+++++.||.|++||..
T Consensus 115 ~-~l~~~~~d~~i~~~d--~~~~~~~~~~~----------~~~v~~~---~~~~~---~~~~l~~~~~d~~i~i~d~~-- 173 (313)
T 3odt_A 115 G-VVISGSWDKTAKVWK--EGSLVYNLQAH----------NASVWDA---KVVSF---SENKFLTASADKTIKLWQND-- 173 (313)
T ss_dssp T-EEEEEETTSEEEEEE--TTEEEEEEECC----------SSCEEEE---EEEET---TTTEEEEEETTSCEEEEETT--
T ss_pred C-EEEEEeCCCCEEEEc--CCcEEEecccC----------CCceeEE---EEccC---CCCEEEEEECCCCEEEEecC--
Confidence 2 456777889999999 44444444321 1111111 12221 12368999999999999953
Q ss_pred CCceeeeec-CccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCC
Q 017296 242 GIPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR 320 (374)
Q Consensus 242 ~~~~~~~~~-h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg 320 (374)
.....+.. |...+.++.+++++. +++++.|+.|++||++... . ...+..|...+.+++|+|++ .|++++.||
T Consensus 174 -~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~--~--~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg 246 (313)
T 3odt_A 174 -KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGD--V--LRTYEGHESFVYCIKLLPNG-DIVSCGEDR 246 (313)
T ss_dssp -EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCC--E--EEEEECCSSCEEEEEECTTS-CEEEEETTS
T ss_pred -ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchh--h--hhhhhcCCceEEEEEEecCC-CEEEEecCC
Confidence 34555666 899999999999887 9999999999999997543 2 23445677889999999999 588999999
Q ss_pred eEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 321 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 321 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
+|++||+.+++.+..+..|...|.+++|+|+++ +++++.|+.|++|++..+
T Consensus 247 ~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 247 TVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp EEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGG
T ss_pred EEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCC
Confidence 999999999999999999999999999999998 567999999999998653
No 27
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.8e-35 Score=265.89 Aligned_cols=317 Identities=17% Similarity=0.235 Sum_probs=218.3
Q ss_pred CCCCeEEeecCCCceeEEEEeCCCCE-EEEecC---CCcEEEEeCcccceeeeee-eeeceeeeEEeccCCcc-ccceee
Q 017296 7 PPDPVAVLRGHRASVTDVCFHQTKPI-LFAGTT---GGELRIWDTVQHRTVSSSW-VHSAAHGIVSVATGPSI-GLNKVI 80 (374)
Q Consensus 7 ~~~~~~~l~gH~~~V~~l~~~~~~~~-l~s~s~---D~~v~vWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~l~ 80 (374)
|......+++|...|++|+|+|++.. +++|+. |+.|++||+.+++...... .|. ..+.+++|++.. +++.++
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~l~ 84 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKA--KPIKCGTFGATSLQQRYLA 84 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEES--SCEEEEECTTCCTTTCCEE
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeeccc--CcEEEEEEcCCCCCCceEE
Confidence 33445667899999999999999965 557766 9999999998877543322 343 458888998741 157899
Q ss_pred eccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCC
Q 017296 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEG 160 (374)
Q Consensus 81 s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (374)
+++.|++|++||+.+++. +...+..+......+... +. ..+.+ +
T Consensus 85 ~~~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~--------------------~~------------~~~s~-~ 128 (357)
T 3i2n_A 85 TGDFGGNLHIWNLEAPEM---PVYSVKGHKEIINAIDGI--------------------GG------------LGIGE-G 128 (357)
T ss_dssp EEETTSCEEEECTTSCSS---CSEEECCCSSCEEEEEEE--------------------SG------------GGCC--C
T ss_pred EecCCCeEEEEeCCCCCc---cEEEEEecccceEEEeec--------------------cc------------cccCC-C
Confidence 999999999999987641 111111110000000000 00 00111 1
Q ss_pred CceEEEcccCCCeEEEEecCCCc-eeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEecc
Q 017296 161 PKYMAVAGEQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (374)
Q Consensus 161 ~~~~~~~~~~d~~i~vWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~ 239 (374)
.. ++++++.|+.|++||+++++ ....+..... .....+..+ .+.+..+.....+++++.||.|++||++
T Consensus 129 ~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~--------~~~~~v~~~-~~~~~~~~~~~~l~~~~~d~~i~i~d~~ 198 (357)
T 3i2n_A 129 AP-EIVTGSRDGTVKVWDPRQKDDPVANMEPVQG--------ENKRDCWTV-AFGNAYNQEERVVCAGYDNGDIKLFDLR 198 (357)
T ss_dssp CC-EEEEEETTSCEEEECTTSCSSCSEEECCCTT--------SCCCCEEEE-EEECCCC-CCCEEEEEETTSEEEEEETT
T ss_pred cc-EEEEEeCCCeEEEEeCCCCCCcceeccccCC--------CCCCceEEE-EEEeccCCCCCEEEEEccCCeEEEEECc
Confidence 22 45677789999999999886 4444432110 001111111 1111111233468899999999999998
Q ss_pred CCCCceeeeecCccCeEEEEEec---CCCceEEEecCCeEEEEEcCCCCCeEEE-EEeeecCCCCeEEEEECCCCC-EEE
Q 017296 240 NPGIPLTAMKVHLEPVLCLSIDE---SCNGGISGGADQKIVLYNLDHSTGSCVI-KKEINLERPGISGTSIRPDSK-IAA 314 (374)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~---~~~~~~s~s~D~~i~lwd~~~~~~~~~~-~~~~~~~~~~v~~~~~sp~~~-~l~ 314 (374)
... ......|..+|.++.|+| ++..+++++.|+.|++||++.......+ ......|...+.+++|+|+++ +++
T Consensus 199 ~~~--~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~ 276 (357)
T 3i2n_A 199 NMA--LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFL 276 (357)
T ss_dssp TTE--EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred cCc--eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEE
Confidence 643 334567899999999999 8889999999999999998653222111 113346778899999999998 899
Q ss_pred EEeCCCeEEEEEccCC-------------------eEEEEecccCCceEEEEEeCCCCEEE-EEeCCCcEEEecCCCCC
Q 017296 315 TAGWDRRVRIYNYRKG-------------------SALAILKYHHATCNAVSFSSDCKLMA-SASEDSTVALWELYPPH 373 (374)
Q Consensus 315 s~~~dg~v~iwd~~~~-------------------~~~~~~~~h~~~v~~v~~sp~~~~la-s~s~D~~v~~W~~~~~~ 373 (374)
+++.||.|++||+..+ +.+..+.+|...|.+++|+|++++|+ +++.|+.|++|++..++
T Consensus 277 ~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 277 TAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp EEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC--
T ss_pred EEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCcc
Confidence 9999999999999753 45778889999999999999999888 89999999999997654
No 28
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=5.4e-36 Score=269.45 Aligned_cols=257 Identities=19% Similarity=0.217 Sum_probs=187.4
Q ss_pred EEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccc--eeeeeeeeeceeeeEEeccCCccccceeeeccccCeEE
Q 017296 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (374)
Q Consensus 12 ~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vr 89 (374)
.++.+|++.|++++|+++|++|+||+.|++|+|||+.+++ .+..+.+|. ..|.+++|++..+++.|+|++.|++|+
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~--~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHE--GPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCS--SCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCC--ccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 3567999999999999999999999999999999998764 355666775 358888887643468999999999999
Q ss_pred EEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEccc
Q 017296 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE 169 (374)
Q Consensus 90 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (374)
+||+++++.. .... . .+-
T Consensus 85 iWd~~~~~~~-----~~~~----------~-----------------------------------------------~~h 102 (316)
T 3bg1_A 85 IWREENGTWE-----KSHE----------H-----------------------------------------------AGH 102 (316)
T ss_dssp EECCSSSCCC-----EEEE----------E-----------------------------------------------CCC
T ss_pred EEECCCCcce-----EEEE----------c-----------------------------------------------cCC
Confidence 9999765210 0000 0 000
Q ss_pred CCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC--ceee
Q 017296 170 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI--PLTA 247 (374)
Q Consensus 170 ~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~--~~~~ 247 (374)
.+. ..++ .+.++. ....+++|+.||+|++||++.... ....
T Consensus 103 -~~~-------------------------------V~~v---~~~p~~--~g~~lasgs~D~~i~lwd~~~~~~~~~~~~ 145 (316)
T 3bg1_A 103 -DSS-------------------------------VNSV---CWAPHD--YGLILACGSSDGAISLLTYTGEGQWEVKKI 145 (316)
T ss_dssp -SSC-------------------------------CCEE---EECCTT--TCSCEEEECSSSCEEEEEECSSSCEEECCB
T ss_pred -CCc-------------------------------eEEE---EECCCC--CCcEEEEEcCCCCEEEEecCCCCCcceeee
Confidence 000 0000 122210 012488999999999999975422 1345
Q ss_pred eecCccCeEEEEEecC-----------------CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCC
Q 017296 248 MKVHLEPVLCLSIDES-----------------CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 310 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~-----------------~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 310 (374)
+.+|...+.++.|+|+ +..+++|+.|++|++||++.. ........+..|...|.+++|+|++
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-~~~~~~~~l~~h~~~V~~v~~sp~~ 224 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED-GQWKEEQKLEAHSDWVRDVAWAPSI 224 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTT-SCEEEEECCBCCSSCEEEEECCCCS
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCC-CccceeeecccCCCceEEEEecCCC
Confidence 6789999999999876 357899999999999999633 2222334566788889999999986
Q ss_pred ----CEEEEEeCCCeEEEEEccCC---e-EEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 311 ----KIAATAGWDRRVRIYNYRKG---S-ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 311 ----~~l~s~~~dg~v~iwd~~~~---~-~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
++|++++.|++|++||+.+. + ....+..|...|.+++|+|++++||+++.|++|+||+..
T Consensus 225 ~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 225 GLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp SCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 78999999999999999763 1 233456789999999999999999999999999999975
No 29
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.3e-35 Score=269.63 Aligned_cols=301 Identities=15% Similarity=0.180 Sum_probs=212.5
Q ss_pred CCCCeEEeecCCCceeEEEEeCCC-CEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeecccc
Q 017296 7 PPDPVAVLRGHRASVTDVCFHQTK-PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (374)
Q Consensus 7 ~~~~~~~l~gH~~~V~~l~~~~~~-~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (374)
..++...+.+|...|++++|+|++ ++|++|+.|++|+|||+.+++....+........+.+++|++. +++.+++++.|
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d 140 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF-NTNQLFVSSIR 140 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT-EEEEEEEEETT
T ss_pred ccceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC-CCCEEEEEeCC
Confidence 345678899999999999999999 9999999999999999988776555442222345888888763 35789999999
Q ss_pred CeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEE
Q 017296 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (374)
Q Consensus 86 ~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (374)
++|++||+.+... ..+.....+. ....+.. +.+ +.. ++
T Consensus 141 ~~i~iwd~~~~~~-----~~~~~~~~~~-----------------~~v~~~~------------------~~~-~~~-~l 178 (383)
T 3ei3_B 141 GATTLRDFSGSVI-----QVFAKTDSWD-----------------YWYCCVD------------------VSV-SRQ-ML 178 (383)
T ss_dssp TEEEEEETTSCEE-----EEEECCCCSS-----------------CCEEEEE------------------EET-TTT-EE
T ss_pred CEEEEEECCCCce-----EEEeccCCCC-----------------CCeEEEE------------------ECC-CCC-EE
Confidence 9999999975310 0000000000 0000000 111 122 45
Q ss_pred EcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC---
Q 017296 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG--- 242 (374)
Q Consensus 166 ~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~--- 242 (374)
++++.|+.|++||+ +++.+..+..+. ....++ .+.++ +...+++|+.|+.|++||++...
T Consensus 179 ~~~~~d~~i~i~d~-~~~~~~~~~~h~----------~~v~~~---~~~~~---~~~~l~s~~~d~~i~iwd~~~~~~~~ 241 (383)
T 3ei3_B 179 ATGDSTGRLLLLGL-DGHEIFKEKLHK----------AKVTHA---EFNPR---CDWLMATSSVDATVKLWDLRNIKDKN 241 (383)
T ss_dssp EEEETTSEEEEEET-TSCEEEEEECSS----------SCEEEE---EECSS---CTTEEEEEETTSEEEEEEGGGCCSTT
T ss_pred EEECCCCCEEEEEC-CCCEEEEeccCC----------CcEEEE---EECCC---CCCEEEEEeCCCEEEEEeCCCCCccc
Confidence 67778899999999 455555554321 111121 24332 22268999999999999998632
Q ss_pred CceeeeecCccCeEEEEEec-CCCceEEEecCCeEEEEEcCCCCCeEEEEEeee---cC----------CCCeEEEEECC
Q 017296 243 IPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN---LE----------RPGISGTSIRP 308 (374)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~~~-~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~---~~----------~~~v~~~~~sp 308 (374)
..+..+ +|..+|.+++|++ ++..+++++.|+.|++||++.......+..... .+ ...+..++|+|
T Consensus 242 ~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~ 320 (383)
T 3ei3_B 242 SYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYP 320 (383)
T ss_dssp CEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBC
T ss_pred ceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecC
Confidence 233334 7999999999999 999999999999999999976543333221110 01 12344577788
Q ss_pred CCCEEEEEeCCCeEEEEEccCCeEEEEecc--cCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 309 DSKIAATAGWDRRVRIYNYRKGSALAILKY--HHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 309 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
++++ +++.|++|++||+.+++.+..+.+ |...+..++|+|++++||+++ |+.|++|++..
T Consensus 321 dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 321 DDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp CTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred Cccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 8877 788999999999999999999987 457788889999999999998 99999999975
No 30
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-35 Score=277.56 Aligned_cols=301 Identities=14% Similarity=0.171 Sum_probs=202.7
Q ss_pred CCeEEeecCCCceeEEEEeC-CCCEEEEecCCCcEEEEeCccccee--eeeeeeeceeeeEEeccCCccccceeeecccc
Q 017296 9 DPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTV--SSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~-~~~~l~s~s~D~~v~vWd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (374)
+......+|...|+||+|+| ++++|++|+.||+|+|||+.+++.. ..+.+|. ..|.+++|++. ++++|+|++.|
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~--~~V~~l~f~p~-~~~~l~s~s~D 186 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAG--GSITGLKFNPL-NTNQFYASSME 186 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSS--CCCCEEEECSS-CTTEEEEECSS
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCC--CCEEEEEEeCC-CCCEEEEEeCC
Confidence 45567789999999999998 5679999999999999999876543 3334454 45888999864 45799999999
Q ss_pred CeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEE
Q 017296 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (374)
Q Consensus 86 ~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (374)
++||+||++++... .......+ . ....+.. +.+ +.. ++
T Consensus 187 ~~v~iwd~~~~~~~-----~~~~~~~~-----------~------~~~~~~~------------------~~~-~~~-~l 224 (435)
T 4e54_B 187 GTTRLQDFKGNILR-----VFASSDTI-----------N------IWFCSLD------------------VSA-SSR-MV 224 (435)
T ss_dssp SCEEEEETTSCEEE-----EEECCSSC-----------S------CCCCCEE------------------EET-TTT-EE
T ss_pred CEEEEeeccCCcee-----EEeccCCC-----------C------ccEEEEE------------------ECC-CCC-EE
Confidence 99999999754210 00000000 0 0000000 111 122 46
Q ss_pred EcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC--
Q 017296 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI-- 243 (374)
Q Consensus 166 ~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~-- 243 (374)
++|+.|+.|++||++.. .+..+..+ .....+ ..|.+. +...+++|+.|++|++||++....
T Consensus 225 ~~g~~dg~i~~wd~~~~-~~~~~~~h----------~~~v~~---v~~~p~---~~~~~~s~s~d~~v~iwd~~~~~~~~ 287 (435)
T 4e54_B 225 VTGDNVGNVILLNMDGK-ELWNLRMH----------KKKVTH---VALNPC---CDWFLATASVDQTVKIWDLRQVRGKA 287 (435)
T ss_dssp EEECSSSBEEEEESSSC-BCCCSBCC----------SSCEEE---EEECTT---CSSEEEEEETTSBCCEEETTTCCSSS
T ss_pred EEEeCCCcEeeeccCcc-eeEEEecc----------cceEEe---eeecCC---CceEEEEecCcceeeEEecccccccc
Confidence 67888999999998753 33333211 111111 134332 233588899999999999976432
Q ss_pred ceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCC--CCeEEEEECCCCCEEEEEe----
Q 017296 244 PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER--PGISGTSIRPDSKIAATAG---- 317 (374)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~s~~---- 317 (374)
.+....+|..+|.+++|+|++..+++++.|++|++||+........+......+. .......|+|++.++++++
T Consensus 288 ~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 367 (435)
T 4e54_B 288 SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDP 367 (435)
T ss_dssp CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCT
T ss_pred eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCC
Confidence 2333467999999999999999999999999999999975443322211111110 1123345666666665554
Q ss_pred --------CCCeEEEEEccCCeEEEEec-ccCCceEEE-EEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 318 --------WDRRVRIYNYRKGSALAILK-YHHATCNAV-SFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 318 --------~dg~v~iwd~~~~~~~~~~~-~h~~~v~~v-~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
.+++|++||..+++.+..+. +|...|.++ +|+|+|++||+|+ |++|+||++.++
T Consensus 368 ~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 368 NFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp TSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC--
T ss_pred CeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECCcC
Confidence 34689999999999888764 677888887 7999999999976 889999999765
No 31
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7e-35 Score=266.09 Aligned_cols=299 Identities=12% Similarity=0.172 Sum_probs=213.7
Q ss_pred EEeecCCCceeEEEEeCC----CCEEEEecCCCcEEEEeCcccceeeeeeeeec---eeeeEEeccCCccc--cceeeec
Q 017296 12 AVLRGHRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRTVSSSWVHSA---AHGIVSVATGPSIG--LNKVISQ 82 (374)
Q Consensus 12 ~~l~gH~~~V~~l~~~~~----~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~l~s~ 82 (374)
..+++|.++|++|+|+|+ ...+++++.++.|++||..+++.+..+..|.. ...+.+++|++... ++.+++|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~ 91 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVA 91 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEe
Confidence 455699999999999984 45666666677999999998887766665542 24578888877422 5689999
Q ss_pred cccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCc
Q 017296 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (374)
Q Consensus 83 ~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (374)
+.|++|++||+.+++... .+........ +.. +.+.++.
T Consensus 92 ~~dg~i~v~d~~~~~~~~----~~~~~~~~i~--------------------~~~------------------~~~~~~~ 129 (366)
T 3k26_A 92 GSRGIIRIINPITMQCIK----HYVGHGNAIN--------------------ELK------------------FHPRDPN 129 (366)
T ss_dssp ETTCEEEEECTTTCCEEE----EEESCCSCEE--------------------EEE------------------ECSSCTT
T ss_pred cCCCEEEEEEchhceEee----eecCCCCcEE--------------------EEE------------------ECCCCCC
Confidence 999999999998764210 1100000000 000 1111223
Q ss_pred eEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC
Q 017296 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~ 242 (374)
++++++.|+.|++||+++++.+..+.... . ......++ .+.++ ...+++++.||.|++||++..
T Consensus 130 -~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~--~~~~v~~~---~~~~~----~~~l~~~~~dg~i~i~d~~~~- 193 (366)
T 3k26_A 130 -LLLSVSKDHALRLWNIQTDTLVAIFGGVE-----G--HRDEVLSA---DYDLL----GEKIMSCGMDHSLKLWRINSK- 193 (366)
T ss_dssp -EEEEEETTSCEEEEETTTTEEEEEECSTT-----S--CSSCEEEE---EECTT----SSEEEEEETTSCEEEEESCSH-
T ss_pred -EEEEEeCCCeEEEEEeecCeEEEEecccc-----c--ccCceeEE---EECCC----CCEEEEecCCCCEEEEECCCC-
Confidence 45677789999999999998777663100 0 11111221 23332 236899999999999999753
Q ss_pred Ccee----------------------------eeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCC--------
Q 017296 243 IPLT----------------------------AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG-------- 286 (374)
Q Consensus 243 ~~~~----------------------------~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~-------- 286 (374)
.... ...+|..+|.++.|+ +..+++++.|+.|++||+.....
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~ 271 (366)
T 3k26_A 194 RMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPS 271 (366)
T ss_dssp HHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTT
T ss_pred ccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccC
Confidence 1121 223389999999999 45789999999999999875432
Q ss_pred --eEEEEEeeecCCCCeEEEEECCC--CCEEEEEeCCCeEEEEEccCCe----EEEEeccc--CCceEEEEEeCCCCEEE
Q 017296 287 --SCVIKKEINLERPGISGTSIRPD--SKIAATAGWDRRVRIYNYRKGS----ALAILKYH--HATCNAVSFSSDCKLMA 356 (374)
Q Consensus 287 --~~~~~~~~~~~~~~v~~~~~sp~--~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~h--~~~v~~v~~sp~~~~la 356 (374)
.......+..|...+.+++|+|+ +++|++++.||.|++||+.+++ ....+.+| ...|.+++|+|++++|+
T Consensus 272 ~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 351 (366)
T 3k26_A 272 ESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI 351 (366)
T ss_dssp CCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEE
T ss_pred CcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEE
Confidence 11233455667778999999999 9999999999999999998875 44577877 78999999999999999
Q ss_pred EEeCCCcEEEecCC
Q 017296 357 SASEDSTVALWELY 370 (374)
Q Consensus 357 s~s~D~~v~~W~~~ 370 (374)
+++.|+.|++||+.
T Consensus 352 s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 352 AVCDDASIWRWDRL 365 (366)
T ss_dssp EEETTSEEEEEEC-
T ss_pred EEeCCCEEEEEEec
Confidence 99999999999985
No 32
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=6.8e-34 Score=265.82 Aligned_cols=294 Identities=18% Similarity=0.269 Sum_probs=212.0
Q ss_pred CCCCeEEeecCC----CceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeec
Q 017296 7 PPDPVAVLRGHR----ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (374)
Q Consensus 7 ~~~~~~~l~gH~----~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 82 (374)
|..|..+|.... -.++.|+|+++ ++|++|. |++|+|||..+|+.+..+..+.+...|.+++|++ ++++|++|
T Consensus 90 ~~~p~~~l~ap~~~~d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fsp--dg~~lasg 165 (420)
T 4gga_A 90 PSLPDRILDAPEIRNDYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIK--EGNYLAVG 165 (420)
T ss_dssp CSSCSEEEECTTCCCCTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECT--TSSEEEEE
T ss_pred CCCCceEEECCCCcccccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECC--CCCEEEEE
Confidence 345666665432 23678999975 5777665 9999999999998877666555555689999988 67899999
Q ss_pred cccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCc
Q 017296 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (374)
Q Consensus 83 ~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (374)
+.|++|++||+.+++.. .....|...+ .... .+ .
T Consensus 166 s~Dg~v~iWd~~~~~~~-------~~~~~h~~~v-------------------~~~s-------------------~~-~ 199 (420)
T 4gga_A 166 TSSAEVQLWDVQQQKRL-------RNMTSHSARV-------------------GSLS-------------------WN-S 199 (420)
T ss_dssp ETTSCEEEEETTTTEEE-------EEECCCSSCE-------------------EEEE-------------------EE-T
T ss_pred ECCCeEEEEEcCCCcEE-------EEEeCCCCce-------------------EEEe-------------------eC-C
Confidence 99999999999886421 1111110000 0000 01 1
Q ss_pred eEEEcccCCCeEEEEecCCCce-eEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCC
Q 017296 163 YMAVAGEQLSEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~ 241 (374)
.++++|+.|+.+++||...... +..+..+. ...+. ..+.+ ....+++++.||.|++||+...
T Consensus 200 ~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~-----------~~~~~--~~~~~----~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 200 YILSSGSRSGHIHHHDVRVAEHHVATLSGHS-----------QEVCG--LRWAP----DGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCS-----------SCEEE--EEECT----TSSEEEEEETTSCEEEEESSCC
T ss_pred CEEEEEeCCCceeEeeecccceeeEEecccc-----------cceee--eeecC----CCCeeeeeeccccceEEeeccc
Confidence 2567888899999999987653 33333211 11111 12222 2236899999999999999754
Q ss_pred C---CceeeeecCccCeEEEEEecCCCce-E--EEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEE
Q 017296 242 G---IPLTAMKVHLEPVLCLSIDESCNGG-I--SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 315 (374)
Q Consensus 242 ~---~~~~~~~~h~~~v~~~~~~~~~~~~-~--s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 315 (374)
. ..+.....|...|.++.+.+....+ + +|+.|++|++||+... .+.. .+.. ...+.++.|+|+++.+++
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~--~~~~--~~~~-~~~v~~~~~~~~~~~lv~ 337 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG--ACLS--AVDA-HSQVCSILWSPHYKELIS 337 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT--EEEE--EEEC-SSCEEEEEEETTTTEEEE
T ss_pred cccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc--ccce--eecc-ccceeeeeecCCCCeEEE
Confidence 3 2345567799999999998865544 3 3567999999999754 3322 2232 346889999999998887
Q ss_pred Ee--CCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 316 AG--WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 316 ~~--~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
++ .|++|+|||+.+++++.++.+|.+.|.+++|+|||++|||||.|++||||++++.
T Consensus 338 ~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 338 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred EEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 65 7999999999999999999999999999999999999999999999999999764
No 33
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.1e-34 Score=255.75 Aligned_cols=252 Identities=19% Similarity=0.273 Sum_probs=188.7
Q ss_pred eeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCC
Q 017296 53 VSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEP 132 (374)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (374)
..++.+|. ..|.+++|++ +++++++++.|++|++||+.++.... .+.........+
T Consensus 6 ~~~~~~h~--~~V~~~~fsp--~~~~l~s~~~dg~v~lWd~~~~~~~~----~~~~~~~~v~~~---------------- 61 (304)
T 2ynn_A 6 KKTFSNRS--DRVKGIDFHP--TEPWVLTTLYSGRVELWNYETQVEVR----SIQVTETPVRAG---------------- 61 (304)
T ss_dssp EEEEEEEC--SCEEEEEECS--SSSEEEEEETTSEEEEEETTTTEEEE----EEECCSSCEEEE----------------
T ss_pred EEeecCCC--CceEEEEECC--CCCEEEEEcCCCcEEEEECCCCceeE----EeeccCCcEEEE----------------
Confidence 34556665 3588999988 67899999999999999998763210 000000000000
Q ss_pred CcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEe
Q 017296 133 KDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA 212 (374)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (374)
. +.+ +++ ++++|+.|++|++||+++++.+..+..+. ....++ .
T Consensus 62 ----~------------------~~~-~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~h~----------~~v~~~---~ 104 (304)
T 2ynn_A 62 ----K------------------FIA-RKN-WIIVGSDDFRIRVFNYNTGEKVVDFEAHP----------DYIRSI---A 104 (304)
T ss_dssp ----E------------------EEG-GGT-EEEEEETTSEEEEEETTTCCEEEEEECCS----------SCEEEE---E
T ss_pred ----E------------------EeC-CCC-EEEEECCCCEEEEEECCCCcEEEEEeCCC----------CcEEEE---E
Confidence 0 001 112 45677889999999999999877775431 111121 2
Q ss_pred eecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEec-CCCceEEEecCCeEEEEEcCCCCCeEEEE
Q 017296 213 YLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSCVIK 291 (374)
Q Consensus 213 ~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~s~s~D~~i~lwd~~~~~~~~~~~ 291 (374)
+.++ ...+++|+.||+|++||++........+.+|...|.+++|+| ++..+++|+.|++|++||+........+
T Consensus 105 ~~~~----~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~- 179 (304)
T 2ynn_A 105 VHPT----KPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL- 179 (304)
T ss_dssp ECSS----SSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEE-
T ss_pred EcCC----CCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcccee-
Confidence 4332 236899999999999999865455667889999999999998 5677999999999999999755433222
Q ss_pred EeeecCCCCeEEEEECC--CCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 292 KEINLERPGISGTSIRP--DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 292 ~~~~~~~~~v~~~~~sp--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
...+...+..+.|+| ++++|++|+.|++|++||+++++++.++.+|...|.+++|+|++++|||++.|++|++||+
T Consensus 180 --~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 180 --TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (304)
T ss_dssp --ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred --ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 123446788888886 7889999999999999999999999999999999999999999999999999999999998
Q ss_pred CCC
Q 017296 370 YPP 372 (374)
Q Consensus 370 ~~~ 372 (374)
...
T Consensus 258 ~~~ 260 (304)
T 2ynn_A 258 STY 260 (304)
T ss_dssp TTC
T ss_pred CCC
Confidence 653
No 34
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-35 Score=275.77 Aligned_cols=310 Identities=17% Similarity=0.263 Sum_probs=213.0
Q ss_pred CCCeEEe-ecCCCceeEEEEeC-CCCEEEEecCCCcEEEEeCcc---cceee-eee-eeeceeeeEEeccCCccccceee
Q 017296 8 PDPVAVL-RGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQ---HRTVS-SSW-VHSAAHGIVSVATGPSIGLNKVI 80 (374)
Q Consensus 8 ~~~~~~l-~gH~~~V~~l~~~~-~~~~l~s~s~D~~v~vWd~~~---~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~l~ 80 (374)
.+++..+ ++|.+.|++|+|+| ++.+|+||+.|++|+|||+.+ +.... ... .|. ..+.++++++ +++.|+
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~ 127 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCS--STVTQITMIP--NFDAFA 127 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECS--SCEEEEEECT--TSSEEE
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCC--CCEEEEEEeC--CCCEEE
Confidence 4677888 99999999999999 999999999999999999876 43221 111 233 4588899987 568999
Q ss_pred eccccCeEEEEecC---CCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCC
Q 017296 81 SQGRDGTVKCWDIE---NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVP 157 (374)
Q Consensus 81 s~~~D~~vrvwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (374)
+++.|++|++||+. +++. ......+ +...+...+.. . ... ..... ...
T Consensus 128 s~s~dg~i~vwd~~~~~~~~~-------~~~~~~~-~i~~~~~~~~~----~--~~~--------~~~~~-------~~~ 178 (437)
T 3gre_A 128 VSSKDGQIIVLKVNHYQQESE-------VKFLNCE-CIRKINLKNFG----K--NEY--------AVRMR-------AFV 178 (437)
T ss_dssp EEETTSEEEEEEEEEEEETTE-------EEEEEEE-EEEEEEGGGGS----S--CCC--------EEEEE-------EEE
T ss_pred EEeCCCEEEEEEeccccCCce-------eeccccc-eeEEEEccCcc----c--ccC--------ceEEE-------EEE
Confidence 99999999999995 3321 1111111 00000000000 0 000 00000 000
Q ss_pred CCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEe
Q 017296 158 AEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (374)
Q Consensus 158 ~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwd 237 (374)
.++ ..++++++.|++|++||+++++.+..+.... ......++ .+.++ ...+++|+.||.|++||
T Consensus 179 ~~~-~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~--------h~~~v~~~---~~s~~----~~~l~s~~~dg~i~iwd 242 (437)
T 3gre_A 179 NEE-KSLLVALTNLSRVIIFDIRTLERLQIIENSP--------RHGAVSSI---CIDEE----CCVLILGTTRGIIDIWD 242 (437)
T ss_dssp CSS-CEEEEEEETTSEEEEEETTTCCEEEEEECCG--------GGCCEEEE---EECTT----SCEEEEEETTSCEEEEE
T ss_pred cCC-CCEEEEEeCCCeEEEEeCCCCeeeEEEccCC--------CCCceEEE---EECCC----CCEEEEEcCCCeEEEEE
Confidence 111 2356677889999999999998877775310 01111222 23332 23689999999999999
Q ss_pred ccCCCCceeeee-cCccCeEEEEEe----cCCCceEEEecCCeEEEEEcCCCCCeEEEEEe-------------------
Q 017296 238 IRNPGIPLTAMK-VHLEPVLCLSID----ESCNGGISGGADQKIVLYNLDHSTGSCVIKKE------------------- 293 (374)
Q Consensus 238 l~~~~~~~~~~~-~h~~~v~~~~~~----~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~------------------- 293 (374)
++. ..++..+. .|..+|.++.+. +++..+++++.|++|++||++.......+...
T Consensus 243 ~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (437)
T 3gre_A 243 IRF-NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEEL 321 (437)
T ss_dssp TTT-TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGC
T ss_pred cCC-ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccc
Confidence 986 45566665 788899999665 45668899999999999999754322221100
Q ss_pred -ee--cCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecc--------------------------------
Q 017296 294 -IN--LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY-------------------------------- 338 (374)
Q Consensus 294 -~~--~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------------------------------- 338 (374)
+. .|...|.+++|+ ++++|++|+.|++|++||+.+++.+..+.+
T Consensus 322 ~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (437)
T 3gre_A 322 NFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSV 400 (437)
T ss_dssp CCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------
T ss_pred eecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEeccccccccc
Confidence 00 144458889999 778999999999999999998877666655
Q ss_pred -----cCCceEEEEEeCC--CCEEEEEeCCCcEEEec
Q 017296 339 -----HHATCNAVSFSSD--CKLMASASEDSTVALWE 368 (374)
Q Consensus 339 -----h~~~v~~v~~sp~--~~~las~s~D~~v~~W~ 368 (374)
|...|.+++|+++ +.+|+||+.||+|+||+
T Consensus 401 ~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 401 DDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred CcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 77999999999999996
No 35
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-35 Score=273.18 Aligned_cols=304 Identities=17% Similarity=0.226 Sum_probs=218.2
Q ss_pred cCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcc----cceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEE
Q 017296 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ----HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (374)
Q Consensus 16 gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvw 91 (374)
+|...|++++|+|++.+|++|+.|+.|++||+.+ .+.+..+..|. ..+.++++++. +++.+++++.|++|++|
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~-~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHS--SSVKTVKFNAK-QDNVLASGGNNGEIFIW 141 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSS--SCCCEEEECSS-STTBEEEECSSSCEEBC
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCc--cceEEEEEcCC-CCCEEEEEcCCCeEEEE
Confidence 6999999999999999999999999999999987 33566666665 35788888873 25789999999999999
Q ss_pred ecCCCCCCCC--CceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEccc
Q 017296 92 DIENGGLSSN--PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE 169 (374)
Q Consensus 92 d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (374)
|+.+++.... ..........| .....+. .+.+.+. .++++++
T Consensus 142 d~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~------------------~~~~~~~-~~l~~~~ 185 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTPGQSMSS-----------------VDEVISL------------------AWNQSLA-HVFASAG 185 (416)
T ss_dssp BTTTTSSCTTTCCCBCCCCSCCS-----------------SCCCCEE------------------EECSSCT-TEEEEES
T ss_pred ECCCCccccccccccccccccCC-----------------CCCeeEE------------------EeCCCCC-cEEEEEc
Confidence 9987641100 00000000000 0000000 0112222 3466777
Q ss_pred CCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCC---cEEEEeccCCCCcee
Q 017296 170 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG---SILVWDIRNPGIPLT 246 (374)
Q Consensus 170 ~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg---~i~iwdl~~~~~~~~ 246 (374)
.|+.|++||+++++.+..+...... .. ......+ ..+.++ +...+++++.|+ .|++||++....+..
T Consensus 186 ~dg~v~iwd~~~~~~~~~~~~~~~~--~~--~~~~v~~---~~~~~~---~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~ 255 (416)
T 2pm9_A 186 SSNFASIWDLKAKKEVIHLSYTSPN--SG--IKQQLSV---VEWHPK---NSTRVATATGSDNDPSILIWDLRNANTPLQ 255 (416)
T ss_dssp SSSCEEEEETTTTEEEEEECCCCCS--SC--CCCCEEE---EEECSS---CTTEEEEEECCSSSCCCCEEETTSTTSCSB
T ss_pred CCCCEEEEECCCCCcceEEeccccc--cc--cCCceEE---EEECCC---CCCEEEEEECCCCCceEEEEeCCCCCCCcE
Confidence 8999999999998877666432100 00 0111111 234332 223688999998 999999987556677
Q ss_pred eee-cCccCeEEEEEec-CCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCC-CEEEEEeCCCeEE
Q 017296 247 AMK-VHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS-KIAATAGWDRRVR 323 (374)
Q Consensus 247 ~~~-~h~~~v~~~~~~~-~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~v~ 323 (374)
.+. +|..+|.+++|+| ++..+++++.|++|++||++... . ...+..|...+.+++|+|++ ++|++++.|++|+
T Consensus 256 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~--~--~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 256 TLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE--Q--LSQFPARGNWCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp CCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCC--E--EEEEECSSSCCCCEEECTTCTTEEEECCSSSEEE
T ss_pred EeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc--c--ceeecCCCCceEEEEECCCCCCEEEEEecCCcEE
Confidence 787 8999999999998 88899999999999999987543 2 23455677789999999998 8999999999999
Q ss_pred EEEccCCeEEEEe-----------------------------------cccCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 324 IYNYRKGSALAIL-----------------------------------KYHHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 324 iwd~~~~~~~~~~-----------------------------------~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
+||+.+++..... ..|...+.+++|+|||++||+++.|++|+||+
T Consensus 332 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 332 VQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITN 411 (416)
T ss_dssp EEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBC
T ss_pred EEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEE
Confidence 9999876432211 11667788999999999999999999999999
Q ss_pred CCCC
Q 017296 369 LYPP 372 (374)
Q Consensus 369 ~~~~ 372 (374)
+...
T Consensus 412 ~~~~ 415 (416)
T 2pm9_A 412 PKIS 415 (416)
T ss_dssp CCCC
T ss_pred eccC
Confidence 9754
No 36
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.4e-33 Score=252.95 Aligned_cols=288 Identities=14% Similarity=0.212 Sum_probs=212.4
Q ss_pred EEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceee---eeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 12 AVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVS---SSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 12 ~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
....+|..+|++++|+|++++|++++ |+.|++||+.+++... .+..+.....+.++++++ +++.+++++.|++|
T Consensus 45 ~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~i 121 (337)
T 1gxr_A 45 INTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP--DGCTLIVGGEASTL 121 (337)
T ss_dssp EEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECT--TSSEEEEEESSSEE
T ss_pred ceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcC--CCCEEEEEcCCCcE
Confidence 34458999999999999999999999 9999999998765332 222112234588888887 56889999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+.+++... ............ +.. +.+ +.. +++++
T Consensus 122 ~~~d~~~~~~~~--~~~~~~~~~~i~--------------------~~~------------------~~~-~~~-~l~~~ 159 (337)
T 1gxr_A 122 SIWDLAAPTPRI--KAELTSSAPACY--------------------ALA------------------ISP-DSK-VCFSC 159 (337)
T ss_dssp EEEECCCC--EE--EEEEECSSSCEE--------------------EEE------------------ECT-TSS-EEEEE
T ss_pred EEEECCCCCcce--eeecccCCCceE--------------------EEE------------------ECC-CCC-EEEEE
Confidence 999998763100 000000000000 000 011 122 34566
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~ 248 (374)
+.|+.|++||+++++.+..+..+. ....++ .+.++ ...+++++.||.|++||++.. .....+
T Consensus 160 ~~dg~v~~~d~~~~~~~~~~~~~~----------~~i~~~---~~~~~----~~~l~~~~~dg~i~~~d~~~~-~~~~~~ 221 (337)
T 1gxr_A 160 CSDGNIAVWDLHNQTLVRQFQGHT----------DGASCI---DISND----GTKLWTGGLDNTVRSWDLREG-RQLQQH 221 (337)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCS----------SCEEEE---EECTT----SSEEEEEETTSEEEEEETTTT-EEEEEE
T ss_pred eCCCcEEEEeCCCCceeeeeeccc----------CceEEE---EECCC----CCEEEEEecCCcEEEEECCCC-ceEeee
Confidence 778999999999988776664321 111111 23332 236889999999999999863 333333
Q ss_pred ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEcc
Q 017296 249 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 328 (374)
Q Consensus 249 ~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~ 328 (374)
.|..++.++.+++++..+++++.|+.|++||++... . .....|...+.+++|+|++++|++++.||.|++||+.
T Consensus 222 -~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~--~---~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 222 -DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD--K---YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp -ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC--E---EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred -cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC--e---EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 478899999999999999999999999999997543 1 2344566789999999999999999999999999999
Q ss_pred CCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 329 KGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 329 ~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
+++.+... .|...|.+++|+|++++|++++.|+.|++|++
T Consensus 296 ~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 296 YGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp TCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred CCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 98887554 58899999999999999999999999999997
No 37
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.2e-34 Score=260.94 Aligned_cols=297 Identities=16% Similarity=0.248 Sum_probs=215.4
Q ss_pred CCCCCeEEeecCCCceeEEEEeCC---CCEEEEecCCCcEEEEeCcc-ccee-eeeeeeeceeeeEEeccCCccccceee
Q 017296 6 PPPDPVAVLRGHRASVTDVCFHQT---KPILFAGTTGGELRIWDTVQ-HRTV-SSSWVHSAAHGIVSVATGPSIGLNKVI 80 (374)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~l~~~~~---~~~l~s~s~D~~v~vWd~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (374)
.+.+++..+.+|.+.|++|+|+|+ |++|++|+.|+.|++||+.+ ++.+ ..+..|. ..+.++++++ +++.|+
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~ 102 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHT--GPVLDVCWSD--DGSKVF 102 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECS--SCEEEEEECT--TSSEEE
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEecccc--CCEEEEEECc--CCCEEE
Confidence 456788999999999999999999 69999999999999999987 5544 4555554 4588888987 668999
Q ss_pred eccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCC
Q 017296 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEG 160 (374)
Q Consensus 81 s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (374)
+++.|++|++||+.+++.. ...........+ .+. ..++
T Consensus 103 s~~~dg~v~iwd~~~~~~~-----~~~~~~~~v~~~--------------------~~~-----------------~~~~ 140 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAI-----QIAQHDAPVKTI--------------------HWI-----------------KAPN 140 (368)
T ss_dssp EEETTSEEEEEETTTTEEE-----EEEECSSCEEEE--------------------EEE-----------------ECSS
T ss_pred EEcCCCcEEEEEcCCCCce-----eeccccCceEEE--------------------EEE-----------------eCCC
Confidence 9999999999999876321 110000000000 000 0011
Q ss_pred CceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccC
Q 017296 161 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (374)
Q Consensus 161 ~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~ 240 (374)
..++++++.|+.|++||+++++.+..+..+. ...++. +.. ..+++++.++.+++||++.
T Consensus 141 -~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-----------~~~~~~---~~~------~~~~~~~~~~~i~~~~~~~ 199 (368)
T 3mmy_A 141 -YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-----------RCYCAD---VIY------PMAVVATAERGLIVYQLEN 199 (368)
T ss_dssp -CEEEEEEETTSEEEEECSSCSSCSEEEECSS-----------CEEEEE---EET------TEEEEEEGGGCEEEEECSS
T ss_pred -CCEEEEccCCCcEEEEECCCCcEEEEEecCC-----------CceEEE---ecC------CeeEEEeCCCcEEEEEecc
Confidence 2346677789999999999988766664321 111111 111 1478899999999999976
Q ss_pred CCCceeeee-cCccCeEEEEEecCCCc----eEEEecCCeEEEEEcCCCCC-eEEEEEeeecCCC------------CeE
Q 017296 241 PGIPLTAMK-VHLEPVLCLSIDESCNG----GISGGADQKIVLYNLDHSTG-SCVIKKEINLERP------------GIS 302 (374)
Q Consensus 241 ~~~~~~~~~-~h~~~v~~~~~~~~~~~----~~s~s~D~~i~lwd~~~~~~-~~~~~~~~~~~~~------------~v~ 302 (374)
......... .+...+.++.+.+.... +++++.|+.|++||++.... ... ..+..|.. .+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~ 277 (368)
T 3mmy_A 200 QPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDN--FTFKCHRSNGTNTSAPQDIYAVN 277 (368)
T ss_dssp SCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHS--EEEECSEEC----CCCEEECCEE
T ss_pred ccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccc--eeeeeeecccccccccccccceE
Confidence 443333222 23456666666544443 89999999999999976432 111 11222222 699
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 303 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
+++|+|++++|++++.||.|++||+.+++.+..+.+|...|.+++|+|+|++||++|.|+..+.|++..
T Consensus 278 ~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~ 346 (368)
T 3mmy_A 278 GIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYN 346 (368)
T ss_dssp EEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGGGCC
T ss_pred EEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccccccC
Confidence 999999999999999999999999999999999999999999999999999999999998877777643
No 38
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-33 Score=262.90 Aligned_cols=297 Identities=16% Similarity=0.189 Sum_probs=216.6
Q ss_pred cCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCC
Q 017296 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (374)
Q Consensus 16 gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~ 95 (374)
+|.+.|++++|+|++++|++|+.|+.|++|| .+++.+..+..|. ..+.++++++ +++.+++++.|++|++||+.+
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~--~~v~~~~~~~--~~~~l~~~~~d~~i~iwd~~~ 180 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHR--APIVSVKWNK--DGTHIISMDVENVTILWNVIS 180 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCC--SCEEEEEECT--TSSEEEEEETTCCEEEEETTT
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCC--ccEEEEEECC--CCCEEEEEecCCeEEEEECCC
Confidence 3899999999999999999999999999999 5677777776665 3588888887 567899999999999999987
Q ss_pred CCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEE
Q 017296 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVE 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 175 (374)
++... .+.........+ ........ +..+ ....+.+ + . .+++++.++.|+
T Consensus 181 ~~~~~----~~~~~~~~~~~~--------~~~~~~~~--------~~~~-------~~~~~~~-~-~-~~~~~~~~g~i~ 230 (425)
T 1r5m_A 181 GTVMQ----HFELKETGGSSI--------NAENHSGD--------GSLG-------VDVEWVD-D-D-KFVIPGPKGAIF 230 (425)
T ss_dssp TEEEE----EECCC-------------------------------CCCB-------SCCEEEE-T-T-EEEEECGGGCEE
T ss_pred CcEEE----EeeccccCccce--------eeccccCC--------ccee-------eEEEEcC-C-C-EEEEEcCCCeEE
Confidence 63210 000000000000 00000000 0000 0000001 1 2 245667789999
Q ss_pred EEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCe
Q 017296 176 IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 255 (374)
Q Consensus 176 vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v 255 (374)
+||+++++.+..+..+ .....++ .+.++ + ..+++++.||.|++||++. ......+..|..+|
T Consensus 231 ~~d~~~~~~~~~~~~~----------~~~i~~~---~~~~~---~-~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i 292 (425)
T 1r5m_A 231 VYQITEKTPTGKLIGH----------HGPISVL---EFNDT---N-KLLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSI 292 (425)
T ss_dssp EEETTCSSCSEEECCC----------SSCEEEE---EEETT---T-TEEEEEETTSCEEEECSSS-BSCSEEECCCSSCE
T ss_pred EEEcCCCceeeeeccC----------CCceEEE---EECCC---C-CEEEEEcCCCEEEEEECCC-CccceEecCCCccE
Confidence 9999998766655422 1111111 23332 2 2689999999999999986 44566778899999
Q ss_pred EEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCe----
Q 017296 256 LCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS---- 331 (374)
Q Consensus 256 ~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~---- 331 (374)
.++.+++++ .+++++.|+.|++||++.. .. ...+..+...+.+++|+|++++|++++.||.|++||+.+++
T Consensus 293 ~~~~~~~~~-~l~~~~~d~~i~i~d~~~~--~~--~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~ 367 (425)
T 1r5m_A 293 VSASWVGDD-KVISCSMDGSVRLWSLKQN--TL--LALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSR 367 (425)
T ss_dssp EEEEEETTT-EEEEEETTSEEEEEETTTT--EE--EEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC---
T ss_pred EEEEECCCC-EEEEEeCCCcEEEEECCCC--cE--eEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCcccee
Confidence 999999988 8999999999999999653 22 23345567789999999999999999999999999999888
Q ss_pred ----------------EEEEecccCC--ceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 332 ----------------ALAILKYHHA--TCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 332 ----------------~~~~~~~h~~--~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
.+..+.+|.. .|.+++|+|++++|++++.|+.|++|++.
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 368 SLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp -----------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred eeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 8889999976 99999999999999999999999999974
No 39
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=260.70 Aligned_cols=304 Identities=17% Similarity=0.220 Sum_probs=214.5
Q ss_pred CCCeEEeecCCCceeEEEEeC-CCCEEEEecCCCcEEEEeCcccceeeeee-------------eeeceeeeEEeccCCc
Q 017296 8 PDPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSW-------------VHSAAHGIVSVATGPS 73 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~-~~~~l~s~s~D~~v~vWd~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~ 73 (374)
.+....+++|.++|++|+|+| ++++|++|+.|+.|++||+.+++....+. +|. ..+.++++++.
T Consensus 33 ~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~ 110 (408)
T 4a11_B 33 NKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR--YSVETVQWYPH 110 (408)
T ss_dssp CTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCS--SCEEEEEECTT
T ss_pred CcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCC--CcEEEEEEccC
Confidence 457788999999999999999 99999999999999999998876544432 233 45888888773
Q ss_pred cccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCC
Q 017296 74 IGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK 153 (374)
Q Consensus 74 ~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (374)
+++.+++++.|++|++||+.+++... ... .......+ ..
T Consensus 111 -~~~~l~s~~~d~~i~iwd~~~~~~~~----~~~-~~~~~~~~--------------------~~--------------- 149 (408)
T 4a11_B 111 -DTGMFTSSSFDKTLKVWDTNTLQTAD----VFN-FEETVYSH--------------------HM--------------- 149 (408)
T ss_dssp -CTTCEEEEETTSEEEEEETTTTEEEE----EEE-CSSCEEEE--------------------EE---------------
T ss_pred -CCcEEEEEeCCCeEEEeeCCCCccce----ecc-CCCceeee--------------------Ee---------------
Confidence 44689999999999999998763210 000 00000000 00
Q ss_pred CCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcE
Q 017296 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSI 233 (374)
Q Consensus 154 ~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i 233 (374)
........+++++..++.|++||+++++.+..+..+. ....++ .+.++ +...+++|+.||.|
T Consensus 150 --~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~----------~~v~~~---~~~~~---~~~ll~~~~~dg~i 211 (408)
T 4a11_B 150 --SPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHR----------QEILAV---SWSPR---YDYILATASADSRV 211 (408)
T ss_dssp --CSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCC----------SCEEEE---EECSS---CTTEEEEEETTSCE
T ss_pred --ecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCC----------CcEEEE---EECCC---CCcEEEEEcCCCcE
Confidence 0000112356677788999999999988766664321 111121 23332 22248899999999
Q ss_pred EEEeccCCCCceeee---------------ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee-ecC
Q 017296 234 LVWDIRNPGIPLTAM---------------KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI-NLE 297 (374)
Q Consensus 234 ~iwdl~~~~~~~~~~---------------~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~-~~~ 297 (374)
++||++....++..+ ..|..+|.+++|++++..+++++.|+.|++||++............ ...
T Consensus 212 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 291 (408)
T 4a11_B 212 KLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNS 291 (408)
T ss_dssp EEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCC
T ss_pred EEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccc
Confidence 999998654333333 5788999999999999999999999999999997543221111100 001
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 298 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 298 ~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
...+........+..++.++.|+.|++||+.+++.+..+.+|...|.+++|+|++++|++++.|+.|++|++..+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 292 KKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp SSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred cccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 111222222334455667788999999999999999999999999999999999999999999999999998654
No 40
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.7e-34 Score=260.98 Aligned_cols=291 Identities=13% Similarity=0.185 Sum_probs=211.4
Q ss_pred EeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccc--eeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEE
Q 017296 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (374)
Q Consensus 13 ~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrv 90 (374)
.+..|.++|++++|+|++++|++|+.|+.|++||..+++ .+..+..|. ..+.++++++ +++.+++++.|++|++
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~~~~~dg~i~v 78 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHN--GQVTGVDWAP--DSNRIVTCGTDRNAYV 78 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCS--SCEEEEEEET--TTTEEEEEETTSCEEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCC--CcccEEEEeC--CCCEEEEEcCCCeEEE
Confidence 466799999999999999999999999999999998876 666776665 3578888887 5689999999999999
Q ss_pred EecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccC
Q 017296 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ 170 (374)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (374)
||+.+++... .. ....+. ....+.. +.+ +.. ++++++.
T Consensus 79 wd~~~~~~~~----~~-~~~~~~-----------------~~v~~~~------------------~~~-~~~-~l~~~~~ 116 (372)
T 1k8k_C 79 WTLKGRTWKP----TL-VILRIN-----------------RAARCVR------------------WAP-NEK-KFAVGSG 116 (372)
T ss_dssp EEEETTEEEE----EE-ECCCCS-----------------SCEEEEE------------------ECT-TSS-EEEEEET
T ss_pred EECCCCeeee----eE-EeecCC-----------------CceeEEE------------------ECC-CCC-EEEEEeC
Confidence 9997753100 00 000000 0000000 111 123 3556667
Q ss_pred CCeEEEEecCCCce---eEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccC-------
Q 017296 171 LSEVEIWDLNTAER---CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN------- 240 (374)
Q Consensus 171 d~~i~vWd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~------- 240 (374)
|+.|++||+++++. ...+... + .....++ .+.++ ...+++++.||.|++||++.
T Consensus 117 d~~v~i~d~~~~~~~~~~~~~~~~-------~--~~~i~~~---~~~~~----~~~l~~~~~dg~i~~~d~~~~~~~~~~ 180 (372)
T 1k8k_C 117 SRVISICYFEQENDWWVCKHIKKP-------I--RSTVLSL---DWHPN----SVLLAAGSCDFKCRIFSAYIKEVEERP 180 (372)
T ss_dssp TSSEEEEEEETTTTEEEEEEECTT-------C--CSCEEEE---EECTT----SSEEEEEETTSCEEEEECCCTTTSCCC
T ss_pred CCEEEEEEecCCCcceeeeeeecc-------c--CCCeeEE---EEcCC----CCEEEEEcCCCCEEEEEcccccccccc
Confidence 89999999988763 2222110 1 1111121 23332 23689999999999999641
Q ss_pred ----------CCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCC
Q 017296 241 ----------PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDS 310 (374)
Q Consensus 241 ----------~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 310 (374)
....+..+..|..+|.++.|++++..+++++.|+.|++||++... . ...+..+...+.+++|+|++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~--~~~~~~~~~~v~~~~~~~~~ 256 (372)
T 1k8k_C 181 APTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM--A--VATLASETLPLLAVTFITES 256 (372)
T ss_dssp CCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTT--E--EEEEECSSCCEEEEEEEETT
T ss_pred cccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCc--e--eEEEccCCCCeEEEEEecCC
Confidence 234566777899999999999999999999999999999997543 2 23345566789999999999
Q ss_pred CEEEEEeCCCeEEEEEccC--CeE--------------------------------E------EEe-cccCCceEEEEEe
Q 017296 311 KIAATAGWDRRVRIYNYRK--GSA--------------------------------L------AIL-KYHHATCNAVSFS 349 (374)
Q Consensus 311 ~~l~s~~~dg~v~iwd~~~--~~~--------------------------------~------~~~-~~h~~~v~~v~~s 349 (374)
++++++ .|+.|++|++.+ ++. . ..+ .+|...|.+++|.
T Consensus 257 ~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 335 (372)
T 1k8k_C 257 SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVL 335 (372)
T ss_dssp EEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEE
T ss_pred CEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEe
Confidence 988877 899999999987 421 0 223 4899999999976
Q ss_pred -CCC---CEEEEEeCCCcEEEecCC
Q 017296 350 -SDC---KLMASASEDSTVALWELY 370 (374)
Q Consensus 350 -p~~---~~las~s~D~~v~~W~~~ 370 (374)
++| ++|+|++.|++|++|++.
T Consensus 336 ~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 336 SGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp ESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred cCCCcceeeEEEecCCCceEEEEec
Confidence 676 999999999999999974
No 41
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.3e-33 Score=264.20 Aligned_cols=305 Identities=17% Similarity=0.243 Sum_probs=215.2
Q ss_pred CCCCCeEEeecCCCce-eEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccc
Q 017296 6 PPPDPVAVLRGHRASV-TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (374)
Q Consensus 6 ~~~~~~~~l~gH~~~V-~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (374)
....+..++++|...| .++.| ++++|+||+.|++|++||+.+++.+..+.+|.. .+.++.+++ + ..+++|+.
T Consensus 109 ~~~~~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~--~V~~l~~~~--~-~~l~s~s~ 181 (464)
T 3v7d_B 109 KFVPQRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDG--GVWALKYAH--G-GILVSGST 181 (464)
T ss_dssp TCCCEEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECS--T-TEEEEEET
T ss_pred CcCcceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCc--CEEEEEEcC--C-CEEEEEeC
Confidence 3445678999999986 66666 567999999999999999999998888877764 578888876 3 38999999
Q ss_pred cCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceE
Q 017296 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (374)
Q Consensus 85 D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (374)
|++|++||+++++... ....+..... +..+ .+.....+
T Consensus 182 dg~i~vwd~~~~~~~~----~~~~h~~~v~--------------------~l~~------------------~~~~~~~~ 219 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCTH----VFEGHNSTVR--------------------CLDI------------------VEYKNIKY 219 (464)
T ss_dssp TSCEEEEETTTTEEEE----EECCCSSCEE--------------------EEEE------------------EESSSCEE
T ss_pred CCCEEEEECCCCcEEE----EECCCCCccE--------------------EEEE------------------ecCCCCCE
Confidence 9999999998763210 0000000000 0000 00011235
Q ss_pred EEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcce--------eEEEeeecCCCCCceEEEEEecCCcEEEE
Q 017296 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMC--------MAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (374)
Q Consensus 165 ~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~gs~dg~i~iw 236 (374)
+++++.|++|++||+++++.................+.....+ ..+..+.+ ....+++|+.||.|++|
T Consensus 220 l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~l~~~~~d~~i~vw 295 (464)
T 3v7d_B 220 IVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG----HGNIVVSGSYDNTLIVW 295 (464)
T ss_dssp EEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE----ETTEEEEEETTSCEEEE
T ss_pred EEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC----CCCEEEEEeCCCeEEEE
Confidence 6778889999999999876432211100000000000000000 00011111 12368999999999999
Q ss_pred eccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEE
Q 017296 237 DIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 316 (374)
Q Consensus 237 dl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 316 (374)
|+++ ...+..+.+|..+|.++.+++++..+++++.|++|++||++.. .. ...+..|...+.+++|+ +++|+++
T Consensus 296 d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~--~~--~~~~~~h~~~v~~~~~~--~~~l~s~ 368 (464)
T 3v7d_B 296 DVAQ-MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENG--EL--MYTLQGHTALVGLLRLS--DKFLVSA 368 (464)
T ss_dssp ETTT-TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTT--EE--EEEECCCSSCEEEEEEC--SSEEEEE
T ss_pred ECCC-CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--cE--EEEEeCCCCcEEEEEEc--CCEEEEE
Confidence 9986 4567778899999999999999999999999999999999653 32 23455677889999998 4799999
Q ss_pred eCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 317 GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 317 ~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
+.||+|++||+.+++...... |...+..++|+|++++|++++ |+.|++|++..+
T Consensus 369 s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 369 AADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp ETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred eCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 999999999999887765553 677888899999999999999 999999998765
No 42
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-33 Score=263.07 Aligned_cols=255 Identities=21% Similarity=0.331 Sum_probs=192.1
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
.++..++.+|.+.|++|+|+|++++|+||+.|++|++||+.+++++..+.+|. ..+.++++++ +++.+++|+.|++
T Consensus 140 ~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~--~~V~~v~~~p--~~~~l~s~s~D~~ 215 (410)
T 1vyh_C 140 GDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHD--HNVSSVSIMP--NGDHIVSASRDKT 215 (410)
T ss_dssp CCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCS--SCEEEEEECS--SSSEEEEEETTSE
T ss_pred CcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCC--CCEEEEEEeC--CCCEEEEEeCCCe
Confidence 35678999999999999999999999999999999999999888888887775 4588888887 5679999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|++||++++.+. .....|...+. . + .+ .+++ .++++
T Consensus 216 i~~wd~~~~~~~-------~~~~~h~~~v~-------------------~------~----------~~-~~~g-~~l~s 251 (410)
T 1vyh_C 216 IKMWEVQTGYCV-------KTFTGHREWVR-------------------M------V----------RP-NQDG-TLIAS 251 (410)
T ss_dssp EEEEETTTCCEE-------EEEECCSSCEE-------------------E------E----------EE-CTTS-SEEEE
T ss_pred EEEEECCCCcEE-------EEEeCCCccEE-------------------E------E----------EE-CCCC-CEEEE
Confidence 999999887421 11000000000 0 0 00 0112 24667
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCC----------------CCceEEEEEecCC
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS----------------QGFVNVLAGYEDG 231 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~gs~dg 231 (374)
++.|++|++||++++++...+..+.. ...++ .+.+... .....+++|+.||
T Consensus 252 ~s~D~~v~vwd~~~~~~~~~~~~h~~----------~v~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 252 CSNDQTVRVWVVATKECKAELREHRH----------VVECI---SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSS----------CEEEE---EECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred EcCCCeEEEEECCCCceeeEecCCCc----------eEEEE---EEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 78899999999999987776654311 11111 1222110 0123689999999
Q ss_pred cEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCC
Q 017296 232 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK 311 (374)
Q Consensus 232 ~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 311 (374)
+|++||+++ +..+..+.+|...|.++.|++++..+++++.|++|++||+...... ..+..|...|.+++|+|+++
T Consensus 319 ~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~----~~~~~h~~~v~~l~~~~~~~ 393 (410)
T 1vyh_C 319 TIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCM----KTLNAHEHFVTSLDFHKTAP 393 (410)
T ss_dssp EEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCC----EEEECCSSCEEEEEECSSSS
T ss_pred eEEEEECCC-CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceE----EEEcCCCCcEEEEEEcCCCC
Confidence 999999986 4567788999999999999999999999999999999999654322 33456778899999999999
Q ss_pred EEEEEeCCCeEEEEEcc
Q 017296 312 IAATAGWDRRVRIYNYR 328 (374)
Q Consensus 312 ~l~s~~~dg~v~iwd~~ 328 (374)
+|++|+.||+|++|+++
T Consensus 394 ~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 394 YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CEEEEETTSEEEEEC--
T ss_pred EEEEEeCCCcEEEEeCC
Confidence 99999999999999863
No 43
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-33 Score=256.55 Aligned_cols=261 Identities=18% Similarity=0.214 Sum_probs=199.0
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCc--ccceeeeeeeeeceeeeEEeccCCccccceeeeccccC
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (374)
+++.++++|.++|++++|+|++++|++|+.|+.|+|||+. +++.+..+.+|. ..+.++++++..+++.|++++.|+
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECCGGGCSEEEEEETTS
T ss_pred CccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCC--CcEEEEEeCCCCCCCEEEEeccCC
Confidence 4678899999999999999999999999999999999997 555666666665 358888888754578999999999
Q ss_pred eEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEE
Q 017296 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (374)
Q Consensus 87 ~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (374)
+|++||+.+++.. .+.. .
T Consensus 80 ~v~iwd~~~~~~~-----~~~~----------~----------------------------------------------- 97 (379)
T 3jrp_A 80 KVLIWKEENGRWS-----QIAV----------H----------------------------------------------- 97 (379)
T ss_dssp CEEEEEEETTEEE-----EEEE----------E-----------------------------------------------
T ss_pred EEEEEEcCCCcee-----Eeee----------e-----------------------------------------------
Confidence 9999999865210 0000 0
Q ss_pred cccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC-Cce
Q 017296 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG-IPL 245 (374)
Q Consensus 167 ~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~-~~~ 245 (374)
.+ ....| .+ ..+.++. ....+++++.||.|++||++... ...
T Consensus 98 ~~-~~~~v-------------------------------~~---~~~~~~~--~~~~l~~~~~d~~i~v~d~~~~~~~~~ 140 (379)
T 3jrp_A 98 AV-HSASV-------------------------------NS---VQWAPHE--YGPLLLVASSDGKVSVVEFKENGTTSP 140 (379)
T ss_dssp CC-CSSCE-------------------------------EE---EEECCGG--GCSEEEEEETTSEEEEEECCTTSCCCE
T ss_pred cC-CCcce-------------------------------EE---EEeCCCC--CCCEEEEecCCCcEEEEecCCCCceee
Confidence 00 00000 00 0111110 01258889999999999997642 234
Q ss_pred eeeecCccCeEEEEEec-------------CCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCC---
Q 017296 246 TAMKVHLEPVLCLSIDE-------------SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD--- 309 (374)
Q Consensus 246 ~~~~~h~~~v~~~~~~~-------------~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--- 309 (374)
..+..|..+|.++.|+| ++..+++++.|+.|++||++...........+..|...+.+++|+|+
T Consensus 141 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~ 220 (379)
T 3jrp_A 141 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLL 220 (379)
T ss_dssp EEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSS
T ss_pred EEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCC
Confidence 45678999999999998 58889999999999999998665554555566778888999999999
Q ss_pred CCEEEEEeCCCeEEEEEccCCe---EEEE--ecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 310 SKIAATAGWDRRVRIYNYRKGS---ALAI--LKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 310 ~~~l~s~~~dg~v~iwd~~~~~---~~~~--~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
+++|++++.||+|++||+.+++ .... ...|...|.+++|+|+|++|++++.|+.|++|++.
T Consensus 221 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 221 RSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred CCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 8999999999999999998763 2222 23488899999999999999999999999999985
No 44
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=8.7e-34 Score=256.35 Aligned_cols=319 Identities=13% Similarity=0.103 Sum_probs=195.7
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccc----eeeeeeeeeceeeeEEeccCCccccceeeeccc
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR----TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (374)
.....++||++.|++|+|+|++++|++|+.|++|++||+.++. .+..+.+|. ..+.+++|++..+++.|++++.
T Consensus 2 ~~~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~d~~~l~s~~~ 79 (351)
T 3f3f_A 2 HMQPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHD--SSIVAIDWASPEYGRIIASASY 79 (351)
T ss_dssp CCCCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCS--SCEEEEEECCGGGCSEEEEEET
T ss_pred CccccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCC--CcEEEEEEcCCCCCCEEEEEcC
Confidence 3456789999999999999999999999999999999998663 344455554 4588889987544689999999
Q ss_pred cCeEEEEecCCCCCCCCCc--eeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCc
Q 017296 85 DGTVKCWDIENGGLSSNPS--LTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (374)
Q Consensus 85 D~~vrvwd~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (374)
|++|++||+.++....... ..+.....|. ....+.. +.+....
T Consensus 80 dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~-----------------~~v~~~~------------------~~~~~~~ 124 (351)
T 3f3f_A 80 DKTVKLWEEDPDQEECSGRRWNKLCTLNDSK-----------------GSLYSVK------------------FAPAHLG 124 (351)
T ss_dssp TSCEEEEEECTTSCTTSSCSEEEEEEECCCS-----------------SCEEEEE------------------ECCGGGC
T ss_pred CCeEEEEecCCCcccccccCcceeeeecccC-----------------CceeEEE------------------EcCCCCC
Confidence 9999999998764211000 0000000000 0000000 1111102
Q ss_pred eEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCc---CCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEecc
Q 017296 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNF---SSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~ 239 (374)
.++++++.|+.|++||+++++.+..+........... .......++ .+.+... ....+++++.|+.+.+|+..
T Consensus 125 ~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~~-~~~~l~~~~~~~~~~~~~~~ 200 (351)
T 3f3f_A 125 LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCL---SWCPSRF-SPEKLAVSALEQAIIYQRGK 200 (351)
T ss_dssp SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEE---EECCCSS-SCCEEEEEETTEEEEEEECT
T ss_pred cEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEE---EeccCCC-CCcEEEEecCCCcEEEEccC
Confidence 2456677889999999998875433221100000000 111112222 2333311 23368899999999888775
Q ss_pred CCCC-ceeeeecCccCeEEEEEecCC----CceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEE
Q 017296 240 NPGI-PLTAMKVHLEPVLCLSIDESC----NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA 314 (374)
Q Consensus 240 ~~~~-~~~~~~~h~~~v~~~~~~~~~----~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 314 (374)
.... ....+.+|..+|.+++|+|++ ..+++++.|+.|++||++......... ...........++....++
T Consensus 201 ~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 276 (351)
T 3f3f_A 201 DGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASE----ESLTNSNMFDNSADVDMDA 276 (351)
T ss_dssp TSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------------------------
T ss_pred CCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccC----CcccceeccCCCccccccc
Confidence 4321 256678899999999999987 689999999999999997432211111 1111222233333333333
Q ss_pred ----EEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 315 ----TAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 315 ----s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
.+.....+.+|+..+.+.+..+.+|...|.+++|+|++++||+++.|+.|++|++..+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 338 (351)
T 3f3f_A 277 QGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYS 338 (351)
T ss_dssp --------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTT
T ss_pred ccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcC
Confidence 3344566777777777888899999999999999999999999999999999999754
No 45
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.6e-33 Score=254.79 Aligned_cols=250 Identities=15% Similarity=0.215 Sum_probs=178.8
Q ss_pred EeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeee----eeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSW----VHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 13 ~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
....|..+|++|+|++++ .|++|+.||+|+|||+.+++.+.... +|. ..|.+++|++ ++++|++|+.|++|
T Consensus 77 ~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~--~~V~~v~~sp--dg~~l~sgs~d~~i 151 (344)
T 4gqb_B 77 AGVQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHD--DIVSTVSVLS--SGTQAVSGSKDICI 151 (344)
T ss_dssp EEEEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCS--SCEEEEEECT--TSSEEEEEETTSCE
T ss_pred eeeccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCC--CCEEEEEECC--CCCEEEEEeCCCeE
Confidence 344578899999999985 68899999999999999887654432 343 4588899987 67899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
|+||+.++++. .....|...+ .+. .+.+.+ ..+++++
T Consensus 152 ~iwd~~~~~~~-------~~~~~h~~~V-----------------~~~------------------~~~~~~-~~~l~s~ 188 (344)
T 4gqb_B 152 KVWDLAQQVVL-------SSYRAHAAQV-----------------TCV------------------AASPHK-DSVFLSC 188 (344)
T ss_dssp EEEETTTTEEE-------EEECCCSSCE-----------------EEE------------------EECSSC-TTEEEEE
T ss_pred EEEECCCCcEE-------EEEcCcCCce-----------------EEE------------------EecCCC-CCceeee
Confidence 99999886421 1111110000 000 011122 2356778
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~ 248 (374)
+.|++|++||+++++....+.... .. ....+ ..+.+. +...+++|+.||+|++||+++ ..++..+
T Consensus 189 s~D~~v~iwd~~~~~~~~~~~~~~--------~~--~~~~~-~~~~p~---~~~~l~sg~~dg~v~~wd~~~-~~~~~~~ 253 (344)
T 4gqb_B 189 SEDNRILLWDTRCPKPASQIGCSA--------PG--YLPTS-LAWHPQ---QSEVFVFGDENGTVSLVDTKS-TSCVLSS 253 (344)
T ss_dssp ETTSCEEEEETTSSSCEEECC------------C--CCEEE-EEECSS---CTTEEEEEETTSEEEEEESCC---CCEEE
T ss_pred ccccccccccccccceeeeeecce--------ee--cccee-eeecCC---CCcceEEeccCCcEEEEECCC-CcEEEEE
Confidence 889999999999998776654211 00 11111 123332 233588899999999999986 4567789
Q ss_pred ecCccCeEEEEEecCC-CceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEE
Q 017296 249 KVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK-IAATAGWDRRVRIYN 326 (374)
Q Consensus 249 ~~h~~~v~~~~~~~~~-~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~~dg~v~iwd 326 (374)
.+|..+|++++|+|++ ..+++||.|++|++||++.. .. .....|...|.+++|+|+++ +|++++.|++|++|+
T Consensus 254 ~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~--~~---~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 254 AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS--EL---FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC--EE---EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC--cE---EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 9999999999999987 46889999999999998643 22 23456888999999999986 577999999999999
Q ss_pred ccCC
Q 017296 327 YRKG 330 (374)
Q Consensus 327 ~~~~ 330 (374)
+.+.
T Consensus 329 v~~~ 332 (344)
T 4gqb_B 329 VPTE 332 (344)
T ss_dssp CCC-
T ss_pred CCCC
Confidence 9764
No 46
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-33 Score=258.20 Aligned_cols=300 Identities=15% Similarity=0.226 Sum_probs=213.9
Q ss_pred CeEEeec--CCCceeEEEEeCCCC-EEEEecCCCcEEEEeC----cccc------eeeeeeeee--------ceeeeEEe
Q 017296 10 PVAVLRG--HRASVTDVCFHQTKP-ILFAGTTGGELRIWDT----VQHR------TVSSSWVHS--------AAHGIVSV 68 (374)
Q Consensus 10 ~~~~l~g--H~~~V~~l~~~~~~~-~l~s~s~D~~v~vWd~----~~~~------~~~~~~~~~--------~~~~~~~~ 68 (374)
....+.. |.++|++++|+|+++ +|++|+.|+.|++||+ .+++ ....+.... ....+.++
T Consensus 35 ~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (425)
T 1r5m_A 35 FVKILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCL 114 (425)
T ss_dssp CCEECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEE
T ss_pred hhhheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEE
Confidence 4445554 559999999999999 9999999999999999 7777 333332200 12358888
Q ss_pred ccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCC
Q 017296 69 ATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS 148 (374)
Q Consensus 69 ~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (374)
++++ ++++|++++.|++|++||. +++.. ..+........ +..
T Consensus 115 ~~s~--~~~~l~~~~~dg~i~i~~~-~~~~~----~~~~~~~~~v~--------------------~~~----------- 156 (425)
T 1r5m_A 115 AWSH--DGNSIVTGVENGELRLWNK-TGALL----NVLNFHRAPIV--------------------SVK----------- 156 (425)
T ss_dssp EECT--TSSEEEEEETTSCEEEEET-TSCEE----EEECCCCSCEE--------------------EEE-----------
T ss_pred EEcC--CCCEEEEEeCCCeEEEEeC-CCCee----eeccCCCccEE--------------------EEE-----------
Confidence 9987 6789999999999999993 33210 00100000000 000
Q ss_pred CCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCC----CCcCCCCC-cceeEEEeeecCCCCCceE
Q 017296 149 LCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGS----PNFSSKGR-GMCMAVQAYLPSKSQGFVN 223 (374)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 223 (374)
+.+ +.. ++++++.|+.|++||+++++.+..+........ ..+..... ..++ .+.++ + .
T Consensus 157 -------~~~-~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~--~ 219 (425)
T 1r5m_A 157 -------WNK-DGT-HIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDV---EWVDD---D--K 219 (425)
T ss_dssp -------ECT-TSS-EEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCC---EEEET---T--E
T ss_pred -------ECC-CCC-EEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEE---EEcCC---C--E
Confidence 111 223 345666789999999999987776653321100 00000000 1111 12221 2 4
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEE
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 303 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~ 303 (374)
+++++.||.|++||++. ......+..|..+|.++.+++++..+++++.|+.|++||++...... .+..+...+.+
T Consensus 220 ~~~~~~~g~i~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~~~~i~~ 294 (425)
T 1r5m_A 220 FVIPGPKGAIFVYQITE-KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQN----CFYGHSQSIVS 294 (425)
T ss_dssp EEEECGGGCEEEEETTC-SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSE----EECCCSSCEEE
T ss_pred EEEEcCCCeEEEEEcCC-CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccce----EecCCCccEEE
Confidence 88999999999999986 45566788899999999999999999999999999999987543322 23446678999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 304 TSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 304 ~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
++|+|++ ++++++.|+.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.|++|++.
T Consensus 295 ~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~ 360 (425)
T 1r5m_A 295 ASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLK 360 (425)
T ss_dssp EEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECH
T ss_pred EEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 9999999 99999999999999999999999999999999999999999999999999999999984
No 47
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-34 Score=263.14 Aligned_cols=296 Identities=12% Similarity=0.118 Sum_probs=197.6
Q ss_pred eEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCccc--ceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 11 ~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
...++.|.++|++++|+|++++|++|+.|+.|++||+.++ +.+..+.+|. ..+.++++++ ++++|++++.|++|
T Consensus 4 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~s~--~~~~l~s~s~d~~v 79 (377)
T 3dwl_C 4 SQVLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHD--KIVTCVDWAP--KSNRIVTCSQDRNA 79 (377)
T ss_dssp EEEEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCS--SCEEEEEECT--TTCCEEEEETTSSE
T ss_pred ceeEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCC--ceEEEEEEeC--CCCEEEEEeCCCeE
Confidence 3466778899999999999999999999999999999887 6667777775 3588888887 56899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+.+++.. .+........... .+. .+.++ .. +++++
T Consensus 80 ~vwd~~~~~~~-~~~~~~~~~~~~v--------------------~~~------------------~~~~~-~~-~l~~~ 118 (377)
T 3dwl_C 80 YVYEKRPDGTW-KQTLVLLRLNRAA--------------------TFV------------------RWSPN-ED-KFAVG 118 (377)
T ss_dssp EEC------CC-CCEEECCCCSSCE--------------------EEE------------------ECCTT-SS-CCEEE
T ss_pred EEEEcCCCCce-eeeeEecccCCce--------------------EEE------------------EECCC-CC-EEEEE
Confidence 99999876410 0000000000000 000 01111 12 34566
Q ss_pred cCCCeEEEEecCCCce---eEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCC----
Q 017296 169 EQLSEVEIWDLNTAER---CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP---- 241 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~---- 241 (374)
+.|+.|++||+++++. ...+... ......++ .+.++ ...+++|+.||.|++||++..
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~~~~~---------h~~~v~~~---~~~~~----~~~l~~~~~d~~i~iwd~~~~~~~~ 182 (377)
T 3dwl_C 119 SGARVISVCYFEQENDWWVSKHLKRP---------LRSTILSL---DWHPN----NVLLAAGCADRKAYVLSAYVRDVDA 182 (377)
T ss_dssp ESSSCEEECCC-----CCCCEEECSS---------CCSCEEEE---EECTT----SSEEEEEESSSCEEEEEECCSSCC-
T ss_pred ecCCeEEEEEECCcccceeeeEeecc---------cCCCeEEE---EEcCC----CCEEEEEeCCCEEEEEEEEecccCC
Confidence 7789999999998763 3344320 11111221 24332 236899999999999998521
Q ss_pred -------------CCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECC
Q 017296 242 -------------GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 308 (374)
Q Consensus 242 -------------~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 308 (374)
...+..+ +|..+|.+++|+|++..+++++.|++|++||++...........+..|...+.+++|+|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 261 (377)
T 3dwl_C 183 KPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWAN 261 (377)
T ss_dssp CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEE
T ss_pred Cccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcC
Confidence 1234445 89999999999999999999999999999999865542222344566777899999999
Q ss_pred CCCEEEEEeCCCeEEEEEccCCe---------------------------------------EEEE-------------e
Q 017296 309 DSKIAATAGWDRRVRIYNYRKGS---------------------------------------ALAI-------------L 336 (374)
Q Consensus 309 ~~~~l~s~~~dg~v~iwd~~~~~---------------------------------------~~~~-------------~ 336 (374)
++++|++++.|+.+ +|+..... .... .
T Consensus 262 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 340 (377)
T 3dwl_C 262 ESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLP 340 (377)
T ss_dssp TTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCS
T ss_pred CCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccC
Confidence 99999998877766 66554211 0000 1
Q ss_pred cccCCceEEEEEeCCC-C---EEEEEeCCCcEEEecC
Q 017296 337 KYHHATCNAVSFSSDC-K---LMASASEDSTVALWEL 369 (374)
Q Consensus 337 ~~h~~~v~~v~~sp~~-~---~las~s~D~~v~~W~~ 369 (374)
..|.+.|.++++.+.+ . .|+|+|.||+|++|++
T Consensus 341 ~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 341 TVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 1299999999976543 3 6999999999999986
No 48
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-34 Score=264.49 Aligned_cols=295 Identities=15% Similarity=0.223 Sum_probs=211.7
Q ss_pred CCCceeEEEEeCCCC-EEEEe----------cCCCcEEEEeCcccc---eeeeeeeeeceeeeEEeccCCccccceeeec
Q 017296 17 HRASVTDVCFHQTKP-ILFAG----------TTGGELRIWDTVQHR---TVSSSWVHSAAHGIVSVATGPSIGLNKVISQ 82 (374)
Q Consensus 17 H~~~V~~l~~~~~~~-~l~s~----------s~D~~v~vWd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~ 82 (374)
+...|.+++|+|++. +|++| +.|+.|+|||+.+++ .+..+ .|. ..+.+++|++ ++++|+++
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~-~~~--~~v~~~~~s~--~~~~l~~~ 85 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASL-QVD--SKFNDLDWSH--NNKIIAGA 85 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCC-CCS--SCEEEEEECS--SSSCEEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEE-ecC--CceEEEEECC--CCCeEEEE
Confidence 456899999999987 99999 899999999998775 33332 243 4588889987 66899999
Q ss_pred cccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCc
Q 017296 83 GRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (374)
Q Consensus 83 ~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (374)
+.|++|++||+.+...... .+.....|. ....+.. +.+.+..
T Consensus 86 ~~dg~v~vw~~~~~~~~~~---~~~~~~~h~-----------------~~v~~~~------------------~~~~~~~ 127 (416)
T 2pm9_A 86 LDNGSLELYSTNEANNAIN---SMARFSNHS-----------------SSVKTVK------------------FNAKQDN 127 (416)
T ss_dssp ESSSCEEEECCSSTTSCCC---EEEECCCSS-----------------SCCCEEE------------------ECSSSTT
T ss_pred ccCCeEEEeeccccccccc---chhhccCCc-----------------cceEEEE------------------EcCCCCC
Confidence 9999999999986211000 010000000 0000000 1122123
Q ss_pred eEEEcccCCCeEEEEecCCCc------eeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEE
Q 017296 163 YMAVAGEQLSEVEIWDLNTAE------RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVW 236 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iw 236 (374)
++++++.|++|++||+++++ ....+.. .........++ .+.++ +...+++++.||.|++|
T Consensus 128 -~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-------~~~~~~~v~~~---~~~~~---~~~~l~~~~~dg~v~iw 193 (416)
T 2pm9_A 128 -VLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ-------SMSSVDEVISL---AWNQS---LAHVFASAGSSNFASIW 193 (416)
T ss_dssp -BEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC-------SCCSSCCCCEE---EECSS---CTTEEEEESSSSCEEEE
T ss_pred -EEEEEcCCCeEEEEECCCCcccccccccccccc-------ccCCCCCeeEE---EeCCC---CCcEEEEEcCCCCEEEE
Confidence 45667788999999999876 2221110 00111122222 23332 23368999999999999
Q ss_pred eccCCCCceeeeecC------ccCeEEEEEecCC-CceEEEecCC---eEEEEEcCCCCCeEEEEEeee-cCCCCeEEEE
Q 017296 237 DIRNPGIPLTAMKVH------LEPVLCLSIDESC-NGGISGGADQ---KIVLYNLDHSTGSCVIKKEIN-LERPGISGTS 305 (374)
Q Consensus 237 dl~~~~~~~~~~~~h------~~~v~~~~~~~~~-~~~~s~s~D~---~i~lwd~~~~~~~~~~~~~~~-~~~~~v~~~~ 305 (374)
|++. ......+..| ..++.++.|+|++ ..+++++.|+ .|++||++..... ...+. .|...+.+++
T Consensus 194 d~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~---~~~~~~~~~~~v~~~~ 269 (416)
T 2pm9_A 194 DLKA-KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP---LQTLNQGHQKGILSLD 269 (416)
T ss_dssp ETTT-TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC---SBCCCSCCSSCEEEEE
T ss_pred ECCC-CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC---cEEeecCccCceeEEE
Confidence 9986 3445556555 7899999999986 5788999998 9999999754211 12234 5667899999
Q ss_pred ECC-CCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCC-CEEEEEeCCCcEEEecCCCC
Q 017296 306 IRP-DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDC-KLMASASEDSTVALWELYPP 372 (374)
Q Consensus 306 ~sp-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~-~~las~s~D~~v~~W~~~~~ 372 (374)
|+| ++++|++++.||+|++||+.+++.+..+.+|...|.+++|+|++ ++|++++.|+.|++|++..+
T Consensus 270 ~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 270 WCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp ECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred eCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 999 99999999999999999999999999999999999999999999 79999999999999998654
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.4e-32 Score=255.32 Aligned_cols=297 Identities=16% Similarity=0.231 Sum_probs=212.9
Q ss_pred CCCCCCCeEEee--cCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeee
Q 017296 4 RPPPPDPVAVLR--GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVIS 81 (374)
Q Consensus 4 ~~~~~~~~~~l~--gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 81 (374)
|+.+..|..++. +|...+...+++.++..+++++.|+.|++||..+++....+..+ ....+.++++++ ++++|++
T Consensus 75 r~~~~~p~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~-~~~~v~~v~~s~--~~~~l~~ 151 (401)
T 4aez_A 75 RRFNTTPERVLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETD-ESTYVASVKWSH--DGSFLSV 151 (401)
T ss_dssp CCCCCSCSEEEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECC-TTCCEEEEEECT--TSSEEEE
T ss_pred CcCCCCcceeeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecC-CCCCEEEEEECC--CCCEEEE
Confidence 444555666666 88888766555555567889999999999999998876655432 234588889987 6689999
Q ss_pred ccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCC
Q 017296 82 QGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGP 161 (374)
Q Consensus 82 ~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (374)
|+.|++|++||+.+++... .+. .|...+ .+..+ ++
T Consensus 152 ~~~dg~i~iwd~~~~~~~~----~~~---~~~~~v-----------------~~~~~---------------------~~ 186 (401)
T 4aez_A 152 GLGNGLVDIYDVESQTKLR----TMA---GHQARV-----------------GCLSW---------------------NR 186 (401)
T ss_dssp EETTSCEEEEETTTCCEEE----EEC---CCSSCE-----------------EEEEE---------------------ET
T ss_pred ECCCCeEEEEECcCCeEEE----Eec---CCCCce-----------------EEEEE---------------------CC
Confidence 9999999999998764210 000 000000 00000 01
Q ss_pred ceEEEcccCCCeEEEEecCCC-ceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccC
Q 017296 162 KYMAVAGEQLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (374)
Q Consensus 162 ~~~~~~~~~d~~i~vWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~ 240 (374)
. ++++++.|+.|++||++.. .....+..+ .....+ ..+.++ ...+++|+.||.|++||+++
T Consensus 187 ~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----------~~~v~~---~~~~~~----~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 187 H-VLSSGSRSGAIHHHDVRIANHQIGTLQGH----------SSEVCG---LAWRSD----GLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp T-EEEEEETTSEEEEEETTSSSCEEEEEECC----------SSCEEE---EEECTT----SSEEEEEETTSCEEEEETTC
T ss_pred C-EEEEEcCCCCEEEEecccCcceeeEEcCC----------CCCeeE---EEEcCC----CCEEEEEeCCCeEEEccCCC
Confidence 2 4667788999999999954 444444321 111111 123332 23689999999999999986
Q ss_pred CCCceeeeecCccCeEEEEEecCCCceE-EEe--cCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEe
Q 017296 241 PGIPLTAMKVHLEPVLCLSIDESCNGGI-SGG--ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG 317 (374)
Q Consensus 241 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~ 317 (374)
..+...+..|..+|.+++|+|++..++ +++ .|+.|++||++... ... .+. +...+.+++|+|+++++++++
T Consensus 249 -~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~--~~~--~~~-~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 249 -SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGA--RVN--TVD-AGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp -SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCC--EEE--EEE-CSSCEEEEEECSSSSEEEEEE
T ss_pred -CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCC--EEE--EEe-CCCcEEEEEECCCCCeEEEEe
Confidence 456677888999999999999765554 444 69999999997543 222 222 345799999999999999854
Q ss_pred --CCCeEEEEEccCCeEEE--EecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 318 --WDRRVRIYNYRKGSALA--ILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 318 --~dg~v~iwd~~~~~~~~--~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
.||.|++||+.+++... .+.+|...|.+++|+|+|++|++++.|++|++|++..+
T Consensus 323 g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 323 GFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp CTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred ecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 89999999999865544 46789999999999999999999999999999999764
No 50
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-34 Score=274.31 Aligned_cols=297 Identities=11% Similarity=0.066 Sum_probs=194.2
Q ss_pred EEeecCCCceeEEEEeCC------CCEEEEecCCCcEEEEeCccccee-----------eeeeeeeceeeeEEeccCCcc
Q 017296 12 AVLRGHRASVTDVCFHQT------KPILFAGTTGGELRIWDTVQHRTV-----------SSSWVHSAAHGIVSVATGPSI 74 (374)
Q Consensus 12 ~~l~gH~~~V~~l~~~~~------~~~l~s~s~D~~v~vWd~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 74 (374)
.++.+|.+.|++|+|+|+ +.+|+|++.|++|+|||+.+++.. ..+.+|. ..+.+++|++
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~--~~v~sv~~s~-- 276 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD--SLITTFDFLS-- 276 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT--TCEEEEEESS--
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC--CCEEEEEecC--
Confidence 457889999999999986 579999999999999999765421 2344443 4578888876
Q ss_pred ccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCC
Q 017296 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKD 154 (374)
Q Consensus 75 ~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (374)
+ ..|++|+.||+|++||++++.. +...+..+...+..+..
T Consensus 277 ~-~~lasgs~DgtV~lWD~~~~~~---~~~~~~~H~~~V~sv~~------------------------------------ 316 (524)
T 2j04_B 277 P-TTVVCGFKNGFVAEFDLTDPEV---PSFYDQVHDSYILSVST------------------------------------ 316 (524)
T ss_dssp S-SEEEEEETTSEEEEEETTBCSS---CSEEEECSSSCEEEEEE------------------------------------
T ss_pred C-CeEEEEeCCCEEEEEECCCCCC---ceEEeecccccEEEEEE------------------------------------
Confidence 2 4799999999999999986532 11111111000000000
Q ss_pred CCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEE
Q 017296 155 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 234 (374)
Q Consensus 155 ~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~ 234 (374)
.+ ++.+..++++++.|++|+|||+++++++..+..+. ......++ .|.|+ +. .+++++.|++|+
T Consensus 317 ~~-s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~--------~~~~v~~v---~fsp~---~~-~l~s~~~d~tv~ 380 (524)
T 2j04_B 317 AY-SDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF--------RGSNLVPV---VYCPQ---IY-SYIYSDGASSLR 380 (524)
T ss_dssp EC-CTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC--------SCCSCCCE---EEETT---TT-EEEEECSSSEEE
T ss_pred Ec-CCCCCeEEEEeccCCeEEEEECCCCCccccccccc--------ccCcccce---EeCCC---cC-eEEEeCCCCcEE
Confidence 00 11111467788899999999999887654443221 00011111 24443 22 488899999999
Q ss_pred EEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee-ecCCCCeEEEEECCCCCEE
Q 017296 235 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI-NLERPGISGTSIRPDSKIA 313 (374)
Q Consensus 235 iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l 313 (374)
+||++.. ..+.++.+|..+|.+++|+|++..+++|+.|++|++||+....-.. ..... ..+...+.+++|+|+++.+
T Consensus 381 lwd~~~~-~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~-~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 381 AVPSRAA-FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHG-IKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp EEETTCT-TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTC-C------CCCCEEEECBCCSSSCEE
T ss_pred EEECccc-ccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccc-cccCccceeeeEEEEeccCCCCCeE
Confidence 9999864 4456788999999999999999999999999999999985421110 00000 0111246789999999855
Q ss_pred EEEeCCCeEEEEEcc-CCeEEEEecccCCceEEEEEeCCCC---EEEEEeCCCcEEEecCCCCC
Q 017296 314 ATAGWDRRVRIYNYR-KGSALAILKYHHATCNAVSFSSDCK---LMASASEDSTVALWELYPPH 373 (374)
Q Consensus 314 ~s~~~dg~v~iwd~~-~~~~~~~~~~h~~~v~~v~~sp~~~---~las~s~D~~v~~W~~~~~~ 373 (374)
. . .| .+++|+.. ++..+.++.+|...|++|+|+|+++ +||+|+.||+||||++...|
T Consensus 459 ~-~-~~-~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 459 R-I-DS-SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp E-E-CC-CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred E-c-cC-CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 3 2 22 33344332 4677788999999999999999964 99999999999999997554
No 51
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1e-32 Score=258.98 Aligned_cols=280 Identities=17% Similarity=0.327 Sum_probs=208.5
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
..+....+|...|++++| ++++|++|+.|++|++||..+++.+..+.+|.. .+.++.+ +++.+++|+.||+|
T Consensus 124 ~~~~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~----~~~~l~sg~~dg~i 195 (435)
T 1p22_A 124 QRIHCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTG--SVLCLQY----DERVIITGSSDSTV 195 (435)
T ss_dssp CCEECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSS--CEEEEEC----CSSEEEEEETTSCE
T ss_pred eEEecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCC--cEEEEEE----CCCEEEEEcCCCeE
Confidence 344455678889998887 789999999999999999999988888877754 4777776 34799999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+.+++.. .....|... +... .+ .+. +++++
T Consensus 196 ~vwd~~~~~~~-------~~~~~h~~~---------------------------v~~l--------~~---~~~-~l~s~ 229 (435)
T 1p22_A 196 RVWDVNTGEML-------NTLIHHCEA---------------------------VLHL--------RF---NNG-MMVTC 229 (435)
T ss_dssp EEEESSSCCEE-------EEECCCCSC---------------------------EEEE--------EC---CTT-EEEEE
T ss_pred EEEECCCCcEE-------EEEcCCCCc---------------------------EEEE--------EE---cCC-EEEEe
Confidence 99999887421 110000000 0000 00 012 46677
Q ss_pred cCCCeEEEEecCCCceeE---EeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCce
Q 017296 169 EQLSEVEIWDLNTAERCT---RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~ 245 (374)
+.|++|++||+++++... .+..+ .....++ .+ ....+++|+.||.|++||+++ ...+
T Consensus 230 s~dg~i~vwd~~~~~~~~~~~~~~~~----------~~~v~~~---~~------~~~~l~s~~~dg~i~vwd~~~-~~~~ 289 (435)
T 1p22_A 230 SKDRSIAVWDMASPTDITLRRVLVGH----------RAAVNVV---DF------DDKYIVSASGDRTIKVWNTST-CEFV 289 (435)
T ss_dssp ETTSCEEEEECSSSSCCEEEEEECCC----------SSCEEEE---EE------ETTEEEEEETTSEEEEEETTT-CCEE
T ss_pred eCCCcEEEEeCCCCCCceeeeEecCC----------CCcEEEE---Ee------CCCEEEEEeCCCeEEEEECCc-CcEE
Confidence 889999999999876542 22211 1111111 12 112689999999999999986 4567
Q ss_pred eeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q 017296 246 TAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIY 325 (374)
Q Consensus 246 ~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iw 325 (374)
..+.+|..+|.++.+++ ..+++|+.|++|++||++... +. ..+..|...+.+++| ++++|++|+.||+|++|
T Consensus 290 ~~~~~~~~~v~~~~~~~--~~l~~g~~dg~i~iwd~~~~~--~~--~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vw 361 (435)
T 1p22_A 290 RTLNGHKRGIACLQYRD--RLVVSGSSDNTIRLWDIECGA--CL--RVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVW 361 (435)
T ss_dssp EEEECCSSCEEEEEEET--TEEEEEETTSCEEEEETTTCC--EE--EEECCCSSCEEEEEC--CSSEEEEEETTSCEEEE
T ss_pred EEEcCCCCcEEEEEeCC--CEEEEEeCCCeEEEEECCCCC--EE--EEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEE
Confidence 78889999999999964 578999999999999997542 22 345567778999988 78899999999999999
Q ss_pred EccCCe---------EEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 326 NYRKGS---------ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 326 d~~~~~---------~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
|+.+++ .+..+.+|.+.|.+++| ++++|++++.|++|++|++..+
T Consensus 362 d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 362 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp EHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred ECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 997765 78889999999999999 7889999999999999998543
No 52
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.8e-32 Score=288.64 Aligned_cols=297 Identities=18% Similarity=0.276 Sum_probs=217.2
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
....++.+|.+.|++++|+|+|++|++|+.|++|++||..+++.+..+.+|. ..+.+++|++ +++++++++.|++|
T Consensus 606 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~--~~v~~~~~s~--~~~~l~s~~~d~~v 681 (1249)
T 3sfz_A 606 LSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHE--DEVLCCAFSS--DDSYIATCSADKKV 681 (1249)
T ss_dssp CCSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS--SCEEEEEECT--TSSEEEEEETTSEE
T ss_pred cceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCC--CCEEEEEEec--CCCEEEEEeCCCeE
Confidence 3456889999999999999999999999999999999999999888887775 3588899987 66899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+.+++... ....+..... +. .+.+.+...++++|
T Consensus 682 ~vwd~~~~~~~~----~~~~~~~~v~--------------------~~------------------~~~~~~~~~~l~sg 719 (1249)
T 3sfz_A 682 KIWDSATGKLVH----TYDEHSEQVN--------------------CC------------------HFTNKSNHLLLATG 719 (1249)
T ss_dssp EEEETTTCCEEE----EEECCSSCEE--------------------EE------------------EECSSSSCCEEEEE
T ss_pred EEEECCCCceEE----EEcCCCCcEE--------------------EE------------------EEecCCCceEEEEE
Confidence 999998874211 1100000000 00 01122234567788
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCc----
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP---- 244 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~---- 244 (374)
+.|++|++||++++++...+..+. ....+ ..+.++ + ..+++++.||+|++||++.....
T Consensus 720 ~~d~~v~vwd~~~~~~~~~~~~h~----------~~v~~---~~~sp~---~-~~l~s~s~dg~v~vwd~~~~~~~~~~~ 782 (1249)
T 3sfz_A 720 SNDFFLKLWDLNQKECRNTMFGHT----------NSVNH---CRFSPD---D-ELLASCSADGTLRLWDVRSANERKSIN 782 (1249)
T ss_dssp ETTSCEEEEETTSSSEEEEECCCS----------SCEEE---EEECSS---T-TEEEEEESSSEEEEEEGGGTEEEEEEE
T ss_pred eCCCeEEEEECCCcchhheecCCC----------CCEEE---EEEecC---C-CEEEEEECCCeEEEEeCCCCcccceec
Confidence 889999999999998877765321 11111 123332 2 26888999999999998642110
Q ss_pred -------------------------------------------------e-eeeecCccCeEEEEEecCCCceEEEecCC
Q 017296 245 -------------------------------------------------L-TAMKVHLEPVLCLSIDESCNGGISGGADQ 274 (374)
Q Consensus 245 -------------------------------------------------~-~~~~~h~~~v~~~~~~~~~~~~~s~s~D~ 274 (374)
. ....+|...+.++.|++++..+++++.|+
T Consensus 783 ~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg 862 (1249)
T 3sfz_A 783 VKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQY 862 (1249)
T ss_dssp CCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSS
T ss_pred ccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCC
Confidence 0 01126788999999999999999999999
Q ss_pred eEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEcc--------------------------
Q 017296 275 KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR-------------------------- 328 (374)
Q Consensus 275 ~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~-------------------------- 328 (374)
.|++||++.. .. ...+..|...+.+++|+|+++++++++.||+|++||+.
T Consensus 863 ~v~vwd~~~~--~~--~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1249)
T 3sfz_A 863 CVELWNIDSR--LK--VADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVL 938 (1249)
T ss_dssp CEEEEETTTT--EE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEE
T ss_pred eEEEEEcCCC--ce--eeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEE
Confidence 9999999743 22 22344556667777777777777777777777777643
Q ss_pred -----------------------------------------------------CCeEEEEecccCCceEEEEEeCCCCEE
Q 017296 329 -----------------------------------------------------KGSALAILKYHHATCNAVSFSSDCKLM 355 (374)
Q Consensus 329 -----------------------------------------------------~~~~~~~~~~h~~~v~~v~~sp~~~~l 355 (374)
+++....+.+|...|.+++|+|+|++|
T Consensus 939 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l 1018 (1249)
T 3sfz_A 939 AVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTL 1018 (1249)
T ss_dssp EEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCE
T ss_pred EecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEE
Confidence 334455667899999999999999999
Q ss_pred EEEeCCCcEEEecCCCC
Q 017296 356 ASASEDSTVALWELYPP 372 (374)
Q Consensus 356 as~s~D~~v~~W~~~~~ 372 (374)
++++.|++|++|++..+
T Consensus 1019 ~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 1019 ISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp EEECSSSBEEEEETTTT
T ss_pred EEEcCCCEEEEEECCCC
Confidence 99999999999998653
No 53
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.4e-32 Score=247.74 Aligned_cols=248 Identities=17% Similarity=0.266 Sum_probs=188.6
Q ss_pred CeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEE
Q 017296 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vr 89 (374)
+...++||...|++++|++++.+++|++.|++|++||+.+++.+..+..|. ..+.++++++ +++++++++.|++|+
T Consensus 72 ~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~--~~~~~~~~sp--dg~~l~~g~~dg~v~ 147 (321)
T 3ow8_A 72 LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGP--VDAWTLAFSP--DSQYLATGTHVGKVN 147 (321)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCT--TCCCCEEECT--TSSEEEEECTTSEEE
T ss_pred eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCC--ccEEEEEECC--CCCEEEEEcCCCcEE
Confidence 345789999999999999999999999999999999999998887776554 3466777877 678999999999999
Q ss_pred EEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEccc
Q 017296 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE 169 (374)
Q Consensus 90 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (374)
+||+++++.. ..+........ +. .+.+ +.+ ++++++
T Consensus 148 i~~~~~~~~~----~~~~~~~~~v~--------------------~~------------------~~sp-dg~-~lasg~ 183 (321)
T 3ow8_A 148 IFGVESGKKE----YSLDTRGKFIL--------------------SI------------------AYSP-DGK-YLASGA 183 (321)
T ss_dssp EEETTTCSEE----EEEECSSSCEE--------------------EE------------------EECT-TSS-EEEEEE
T ss_pred EEEcCCCcee----EEecCCCceEE--------------------EE------------------EECC-CCC-EEEEEc
Confidence 9999876321 01100000000 00 0111 223 456777
Q ss_pred CCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeee
Q 017296 170 QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMK 249 (374)
Q Consensus 170 ~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~ 249 (374)
.|+.|++||+++++.+..+..+. . ...++ .|.++ ...+++|+.||+|++||++. ......+.
T Consensus 184 ~dg~i~iwd~~~~~~~~~~~~h~--------~--~v~~l---~~spd----~~~l~s~s~dg~i~iwd~~~-~~~~~~~~ 245 (321)
T 3ow8_A 184 IDGIINIFDIATGKLLHTLEGHA--------M--PIRSL---TFSPD----SQLLVTASDDGYIKIYDVQH-ANLAGTLS 245 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCS--------S--CCCEE---EECTT----SCEEEEECTTSCEEEEETTT-CCEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcccC--------C--ceeEE---EEcCC----CCEEEEEcCCCeEEEEECCC-cceeEEEc
Confidence 89999999999998877765321 1 11111 24332 23689999999999999986 44567788
Q ss_pred cCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEc
Q 017296 250 VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 327 (374)
Q Consensus 250 ~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~ 327 (374)
+|...|.+++|+|++..+++++.|++|++||++.. .+. ..+..|...|.+++|+|++++|++++.||+|++||.
T Consensus 246 ~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~--~~~--~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 246 GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR--TCV--HTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT--EEE--EEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC--EEE--EEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99999999999999999999999999999999643 332 344567788999999999999999999999999996
No 54
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2e-33 Score=254.55 Aligned_cols=282 Identities=11% Similarity=0.127 Sum_probs=207.6
Q ss_pred eEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccc---eeeeeeeeeceeeeEEeccCCccccc-eeeeccccC
Q 017296 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR---TVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDG 86 (374)
Q Consensus 11 ~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~D~ 86 (374)
+....+|.+.|++++|+|++.+|++++.|+.|++||+.+++ .+..+..|. ..+.++++++ +++ .+++++.|+
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~~l~~~~~dg 79 (342)
T 1yfq_A 4 VQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYK--HPLLCCNFID--NTDLQIYVGTVQG 79 (342)
T ss_dssp EECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECS--SCEEEEEEEE--SSSEEEEEEETTS
T ss_pred eecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecC--CceEEEEECC--CCCcEEEEEcCCC
Confidence 34456899999999999999999999999999999998776 234444454 4578888876 568 899999999
Q ss_pred eEEEEec-CCCCCCCCCceeeee--cceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCce
Q 017296 87 TVKCWDI-ENGGLSSNPSLTIKT--NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (374)
Q Consensus 87 ~vrvwd~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (374)
+|++||+ .+++. ..+.. ...... +.. +.+ ..
T Consensus 80 ~i~~wd~~~~~~~-----~~~~~~~~~~~v~--------------------~l~------------------~~~--~~- 113 (342)
T 1yfq_A 80 EILKVDLIGSPSF-----QALTNNEANLGIC--------------------RIC------------------KYG--DD- 113 (342)
T ss_dssp CEEEECSSSSSSE-----EECBSCCCCSCEE--------------------EEE------------------EET--TT-
T ss_pred eEEEEEeccCCce-----EeccccCCCCceE--------------------EEE------------------eCC--CC-
Confidence 9999999 76531 01000 000000 000 011 12
Q ss_pred EEEcccCCCeEEEEecCC---------CceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEE
Q 017296 164 MAVAGEQLSEVEIWDLNT---------AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 234 (374)
Q Consensus 164 ~~~~~~~d~~i~vWd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~ 234 (374)
++++++.|+.|++||+++ ++.+..+. ......++ .+.++ .+++++.|+.|+
T Consensus 114 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-----------~~~~v~~~---~~~~~------~l~~~~~d~~i~ 173 (342)
T 1yfq_A 114 KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-----------VKNKIFTM---DTNSS------RLIVGMNNSQVQ 173 (342)
T ss_dssp EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-----------SCCCEEEE---EECSS------EEEEEESTTEEE
T ss_pred EEEEEcCCCeEEEEcccccccccccccCCeeeEEe-----------eCCceEEE---EecCC------cEEEEeCCCeEE
Confidence 355677889999999986 44322221 11122222 23221 388999999999
Q ss_pred EEeccC-CCCc-eeeeecCccCeEEEEEec-CCCceEEEecCCeEEEEEcCCC------CCeEEEEEeeecCC-------
Q 017296 235 VWDIRN-PGIP-LTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHS------TGSCVIKKEINLER------- 298 (374)
Q Consensus 235 iwdl~~-~~~~-~~~~~~h~~~v~~~~~~~-~~~~~~s~s~D~~i~lwd~~~~------~~~~~~~~~~~~~~------- 298 (374)
+||++. .... ......|..++.++.+++ ++..+++++.||.|++|+++.. ..... +..+.
T Consensus 174 i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 249 (342)
T 1yfq_A 174 WFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFA----FRCHRLNLKDTN 249 (342)
T ss_dssp EEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEE----EECCCCCTTCCS
T ss_pred EEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCccccccccee----eecccccccccc
Confidence 999986 4332 233456788999999999 9999999999999999999765 22222 23333
Q ss_pred --CCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEeccc-CCceEEEEEeCCCCEEEEEeCCCc-EEEec
Q 017296 299 --PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH-HATCNAVSFSSDCKLMASASEDST-VALWE 368 (374)
Q Consensus 299 --~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h-~~~v~~v~~sp~~~~las~s~D~~-v~~W~ 368 (374)
..+.+++|+|++++|++++.||+|++||+.+++.+..+.+| ...|.+++ |++++|++++.|++ .+.|.
T Consensus 250 ~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 250 LAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp SCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred cceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCccccccc
Confidence 37999999999999999999999999999999999999998 99999999 99999999999999 44444
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=5.6e-32 Score=254.62 Aligned_cols=281 Identities=24% Similarity=0.429 Sum_probs=211.3
Q ss_pred CCCeEEeecCCCce-eEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccC
Q 017296 8 PDPVAVLRGHRASV-TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (374)
Q Consensus 8 ~~~~~~l~gH~~~V-~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (374)
.++...+.||.+.| .++ .+++++|++|+.|++|++||+.+++.+..+.+|.. .+.++.++ ++.+++|+.|+
T Consensus 108 ~~~~~~l~~h~~~v~~~~--~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~----~~~l~s~~~dg 179 (445)
T 2ovr_B 108 LKSPKVLKGHDDHVITCL--QFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG--GVWSSQMR----DNIIISGSTDR 179 (445)
T ss_dssp CCCCEEEECSTTSCEEEE--EEETTEEEEEETTSCEEEEETTTCCEEEECCCCSS--CEEEEEEE----TTEEEEEETTS
T ss_pred cceeEEecccCCCcEEEE--EEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCC--CEEEEEec----CCEEEEEeCCC
Confidence 34678899999986 554 45689999999999999999999998888877764 46777765 36899999999
Q ss_pred eEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEE
Q 017296 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (374)
Q Consensus 87 ~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (374)
+|++||+.+++.. .....|...+ .+... .+. .++
T Consensus 180 ~i~vwd~~~~~~~-------~~~~~h~~~v-----------------~~~~~---------------------~~~-~l~ 213 (445)
T 2ovr_B 180 TLKVWNAETGECI-------HTLYGHTSTV-----------------RCMHL---------------------HEK-RVV 213 (445)
T ss_dssp CEEEEETTTTEEE-------EEECCCSSCE-----------------EEEEE---------------------ETT-EEE
T ss_pred eEEEEECCcCcEE-------EEECCCCCcE-----------------EEEEe---------------------cCC-EEE
Confidence 9999999876321 1100000000 00000 012 356
Q ss_pred cccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee
Q 017296 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (374)
Q Consensus 167 ~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~ 246 (374)
+++.|++|++||+++++.+..+..+. ....++ .+ + + ..+++|+.||.|++||+++ ...+.
T Consensus 214 s~s~dg~i~~wd~~~~~~~~~~~~~~----------~~v~~~---~~--~---~-~~l~~~~~dg~i~iwd~~~-~~~~~ 273 (445)
T 2ovr_B 214 SGSRDATLRVWDIETGQCLHVLMGHV----------AAVRCV---QY--D---G-RRVVSGAYDFMVKVWDPET-ETCLH 273 (445)
T ss_dssp EEETTSEEEEEESSSCCEEEEEECCS----------SCEEEE---EE--C---S-SCEEEEETTSCEEEEEGGG-TEEEE
T ss_pred EEeCCCEEEEEECCCCcEEEEEcCCc----------ccEEEE---EE--C---C-CEEEEEcCCCEEEEEECCC-CcEeE
Confidence 77889999999999998777665321 111121 12 1 1 2589999999999999986 45677
Q ss_pred eeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q 017296 247 AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 326 (374)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd 326 (374)
.+.+|..+|.++.+ ++..+++++.|+.|++||++... .. ..+..|...+.++.+ +++++++++.||+|++||
T Consensus 274 ~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~--~~--~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd 345 (445)
T 2ovr_B 274 TLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGN--CI--HTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWD 345 (445)
T ss_dssp EECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCC--EE--EEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEE
T ss_pred EecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCC--EE--EEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEE
Confidence 78899999999999 45678999999999999997543 22 334456666776666 467999999999999999
Q ss_pred ccCCeEEEEecc---cCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 327 YRKGSALAILKY---HHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 327 ~~~~~~~~~~~~---h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
+.+++.+..+.. |...|.+++|+ +++|++++.|++|++|++..+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 346 IKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp TTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred CCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCC
Confidence 999999988886 88899999995 589999999999999998754
No 56
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.1e-32 Score=253.93 Aligned_cols=299 Identities=14% Similarity=0.166 Sum_probs=209.2
Q ss_pred eecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEec
Q 017296 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI 93 (374)
Q Consensus 14 l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~ 93 (374)
+.+| ..+...+|++++++|++|+.|+.|++||+.+++....+..|. ..+.++++++ +++.|++++.|++|++||+
T Consensus 94 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~s~s~d~~i~iwd~ 168 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV--SEITKLKFFP--SGEALISSSQDMQLKIWSV 168 (420)
T ss_dssp SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS--SCEEEEEECT--TSSEEEEEETTSEEEEEET
T ss_pred EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccccc--CccEEEEECC--CCCEEEEEeCCCeEEEEeC
Confidence 4455 444555789999999999999999999999887766655665 4588889987 5679999999999999999
Q ss_pred CCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCe
Q 017296 94 ENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSE 173 (374)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 173 (374)
.+++... .+..+......+ . +.++ .. ++++++.|++
T Consensus 169 ~~~~~~~----~~~~h~~~v~~~--------------------~------------------~~~~-~~-~l~s~~~d~~ 204 (420)
T 3vl1_A 169 KDGSNPR----TLIGHRATVTDI--------------------A------------------IIDR-GR-NVLSASLDGT 204 (420)
T ss_dssp TTCCCCE----EEECCSSCEEEE--------------------E------------------EETT-TT-EEEEEETTSC
T ss_pred CCCcCce----EEcCCCCcEEEE--------------------E------------------EcCC-CC-EEEEEcCCCc
Confidence 8774321 111110000000 0 0111 22 3557778899
Q ss_pred EEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEe--------------eecCCCCCceEEEEEecCCcEEEEecc
Q 017296 174 VEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA--------------YLPSKSQGFVNVLAGYEDGSILVWDIR 239 (374)
Q Consensus 174 i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~gs~dg~i~iwdl~ 239 (374)
|++||+++++.+..+..+... .....++.... .....+.....+++|+.||.|++||++
T Consensus 205 v~iwd~~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~ 277 (420)
T 3vl1_A 205 IRLWECGTGTTIHTFNRKENP-------HDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVF 277 (420)
T ss_dssp EEEEETTTTEEEEEECBTTBT-------TCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETT
T ss_pred EEEeECCCCceeEEeecCCCC-------CCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECC
Confidence 999999999887776542110 00011111000 000011233468999999999999998
Q ss_pred CCCCceeeeecCccCeEEEEEecCCC-ceEEEecCCeEEEEEcCCCCCeEEEEEeee-cCCCCeEEEEECCCCCEEEEEe
Q 017296 240 NPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEIN-LERPGISGTSIRPDSKIAATAG 317 (374)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~s~~ 317 (374)
...........|..+|.+++|+|++. .+++++.||.|++||++...... ..+. .+...+.++.+ |++++|++++
T Consensus 278 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~---~~~~~~~~~~v~~~~~-~~~~~l~s~~ 353 (420)
T 3vl1_A 278 SKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPV---GEFLINEGTPINNVYF-AAGALFVSSG 353 (420)
T ss_dssp TCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS---EEEEESTTSCEEEEEE-ETTEEEEEET
T ss_pred CCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCch---hhhhccCCCCceEEEe-CCCCEEEEec
Confidence 75544444456889999999999988 89999999999999997643211 1122 24556777755 5788999999
Q ss_pred CCCeEEEEEccCCe---------EEEEecccCCceEEEEEeCCCC---EEEEEeCCCcEEEecCCCC
Q 017296 318 WDRRVRIYNYRKGS---------ALAILKYHHATCNAVSFSSDCK---LMASASEDSTVALWELYPP 372 (374)
Q Consensus 318 ~dg~v~iwd~~~~~---------~~~~~~~h~~~v~~v~~sp~~~---~las~s~D~~v~~W~~~~~ 372 (374)
.|++|++||+.+++ ....+.+|...|.+++|+|+++ .|++++.++.+++|++++|
T Consensus 354 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 354 FDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLSNP 420 (420)
T ss_dssp TTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESCC-
T ss_pred CCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEeccCC
Confidence 99999999987631 1234667889999999999999 7888888999999999876
No 57
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.2e-31 Score=252.35 Aligned_cols=283 Identities=19% Similarity=0.347 Sum_probs=216.1
Q ss_pred CCCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccC
Q 017296 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (374)
Q Consensus 7 ~~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (374)
..+++..+.+|.++|++++|+ +++|++|+.|++|++||+.+++.+..+.+|.. .+.++.++ ++.+++++.|+
T Consensus 148 ~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~----~~~l~s~s~dg 219 (445)
T 2ovr_B 148 TGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTS--TVRCMHLH----EKRVVSGSRDA 219 (445)
T ss_dssp TCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEEE----TTEEEEEETTS
T ss_pred CCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCC--cEEEEEec----CCEEEEEeCCC
Confidence 346788999999999999997 67999999999999999999988888777753 46677664 36899999999
Q ss_pred eEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEE
Q 017296 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (374)
Q Consensus 87 ~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (374)
+|++||+.+++.. ..+........ +.. . ++. +++
T Consensus 220 ~i~~wd~~~~~~~----~~~~~~~~~v~--------------------~~~--------------------~-~~~-~l~ 253 (445)
T 2ovr_B 220 TLRVWDIETGQCL----HVLMGHVAAVR--------------------CVQ--------------------Y-DGR-RVV 253 (445)
T ss_dssp EEEEEESSSCCEE----EEEECCSSCEE--------------------EEE--------------------E-CSS-CEE
T ss_pred EEEEEECCCCcEE----EEEcCCcccEE--------------------EEE--------------------E-CCC-EEE
Confidence 9999999876421 01100000000 000 0 112 355
Q ss_pred cccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee
Q 017296 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (374)
Q Consensus 167 ~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~ 246 (374)
+++.|+.|++||+++++.+..+..+. ....++ .+ ....+++|+.||.|++||+++ ...+.
T Consensus 254 ~~~~dg~i~iwd~~~~~~~~~~~~~~----------~~v~~~---~~------~~~~l~~~~~d~~i~i~d~~~-~~~~~ 313 (445)
T 2ovr_B 254 SGAYDFMVKVWDPETETCLHTLQGHT----------NRVYSL---QF------DGIHVVSGSLDTSIRVWDVET-GNCIH 313 (445)
T ss_dssp EEETTSCEEEEEGGGTEEEEEECCCS----------SCEEEE---EE------CSSEEEEEETTSCEEEEETTT-CCEEE
T ss_pred EEcCCCEEEEEECCCCcEeEEecCCC----------CceEEE---EE------CCCEEEEEeCCCeEEEEECCC-CCEEE
Confidence 67778999999999998777765321 111111 12 122689999999999999986 45677
Q ss_pred eeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeee---cCCCCeEEEEECCCCCEEEEEeCCCeEE
Q 017296 247 AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN---LERPGISGTSIRPDSKIAATAGWDRRVR 323 (374)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~~~~l~s~~~dg~v~ 323 (374)
.+.+|...+.++.+++ ..+++++.||.|++||++... .. ..+. .|...+.+++|+ +++|++|+.||+|+
T Consensus 314 ~~~~~~~~v~~~~~~~--~~l~~~~~dg~i~vwd~~~~~--~~--~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~ 385 (445)
T 2ovr_B 314 TLTGHQSLTSGMELKD--NILVSGNADSTVKIWDIKTGQ--CL--QTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVK 385 (445)
T ss_dssp EECCCCSCEEEEEEET--TEEEEEETTSCEEEEETTTCC--EE--EEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEE
T ss_pred EEcCCcccEEEEEEeC--CEEEEEeCCCeEEEEECCCCc--EE--EEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEE
Confidence 7889999999999875 478999999999999996543 22 2222 256679999996 57999999999999
Q ss_pred EEEccCCeEEEEe-----cccCCceEEEEEeCCCCEEEEEeCCCc----EEEecCCC
Q 017296 324 IYNYRKGSALAIL-----KYHHATCNAVSFSSDCKLMASASEDST----VALWELYP 371 (374)
Q Consensus 324 iwd~~~~~~~~~~-----~~h~~~v~~v~~sp~~~~las~s~D~~----v~~W~~~~ 371 (374)
+||+.+++.+..+ ..|.+.|++++|+|++.+||+++.||+ |.+||+..
T Consensus 386 iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 386 LWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp EEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCC
T ss_pred EEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCC
Confidence 9999999988877 468889999999999999999999998 99999964
No 58
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.6e-32 Score=256.36 Aligned_cols=309 Identities=17% Similarity=0.241 Sum_probs=215.1
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
.+++..+.+|.++|++++|++++ +|++|+.|++|++||+.+++++..+.+|.. .+.++.+.+..+++.+++++.|++
T Consensus 152 ~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~--~v~~l~~~~~~~~~~l~s~s~d~~ 228 (464)
T 3v7d_B 152 KKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNS--TVRCLDIVEYKNIKYIVTGSRDNT 228 (464)
T ss_dssp TEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEEEESSSCEEEEEEETTSC
T ss_pred CcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCC--ccEEEEEecCCCCCEEEEEcCCCc
Confidence 45788899999999999999887 999999999999999999998888877754 477777765556789999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|++||++++........ ..............+......... ...+. .+. ..+. ++++
T Consensus 229 i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--------~~~v~----------~~~-~~~~-~l~~ 285 (464)
T 3v7d_B 229 LHVWKLPKESSVPDHGE---EHDYPLVFHTPEENPYFVGVLRGH--------MASVR----------TVS-GHGN-IVVS 285 (464)
T ss_dssp EEEEECCCCCCC---------CCSSEEESCGGGCTTEEEEECCC--------SSCEE----------EEE-EETT-EEEE
T ss_pred EEEeeCCCCcccccccc---cCCcceEeeccCCCeEEEEEccCc--------cceEE----------EEc-CCCC-EEEE
Confidence 99999987643211000 000000000000000000000000 00000 000 1112 4567
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
++.|++|++||+++++.+..+..+. ....++ .+.++ ...+++|+.||.|++||+++ +..+..
T Consensus 286 ~~~d~~i~vwd~~~~~~~~~~~~~~----------~~v~~~---~~~~~----~~~l~sg~~dg~i~vwd~~~-~~~~~~ 347 (464)
T 3v7d_B 286 GSYDNTLIVWDVAQMKCLYILSGHT----------DRIYST---IYDHE----RKRCISASMDTTIRIWDLEN-GELMYT 347 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCS----------SCEEEE---EEETT----TTEEEEEETTSCEEEEETTT-TEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEecCCC----------CCEEEE---EEcCC----CCEEEEEeCCCcEEEEECCC-CcEEEE
Confidence 7789999999999998877764321 111221 23332 23689999999999999986 566788
Q ss_pred eecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEc
Q 017296 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 327 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~ 327 (374)
+.+|..+|.++.+++ ..+++++.||+|++||++... ..... .+...+..++|+|+++++++++ ||+|++||+
T Consensus 348 ~~~h~~~v~~~~~~~--~~l~s~s~dg~v~vwd~~~~~--~~~~~---~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~ 419 (464)
T 3v7d_B 348 LQGHTALVGLLRLSD--KFLVSAAADGSIRGWDANDYS--RKFSY---HHTNLSAITTFYVSDNILVSGS-ENQFNIYNL 419 (464)
T ss_dssp ECCCSSCEEEEEECS--SEEEEEETTSEEEEEETTTCC--EEEEE---ECTTCCCEEEEEECSSEEEEEE-TTEEEEEET
T ss_pred EeCCCCcEEEEEEcC--CEEEEEeCCCcEEEEECCCCc--eeeee---cCCCCccEEEEEeCCCEEEEec-CCeEEEEEC
Confidence 899999999999984 578999999999999997543 22211 2344577889999999999988 999999999
Q ss_pred cCCeEEEE-ecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 328 RKGSALAI-LKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 328 ~~~~~~~~-~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
.+++.+.. +..|...|.+++|+ ++.++++++.|+.+.+|-+
T Consensus 420 ~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 420 RSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLEIL 461 (464)
T ss_dssp TTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred CCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEEEe
Confidence 99998875 66788999999997 4456666777887766643
No 59
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-32 Score=277.27 Aligned_cols=346 Identities=11% Similarity=0.105 Sum_probs=209.3
Q ss_pred ecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecC
Q 017296 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (374)
Q Consensus 15 ~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~ 94 (374)
..|..+|++|+|+| |++|+|++.|++|+|||+.+++.+..+. |. ..+.++++++ +++++++|+.||+|++||++
T Consensus 55 ~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~--~~V~~v~~sp--~g~~l~sgs~dg~V~lwd~~ 128 (902)
T 2oaj_A 55 LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VP--GKITSIDTDA--SLDWMLIGLQNGSMIVYDID 128 (902)
T ss_dssp CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CS--SCEEEEECCT--TCSEEEEEETTSCEEEEETT
T ss_pred cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CC--CCEEEEEECC--CCCEEEEEcCCCcEEEEECC
Confidence 46899999999999 8899999999999999999988877664 32 3578888887 67899999999999999998
Q ss_pred CCCCCCCCceee----------eecceeeeeeeeeccccccccccCCCCc-ccccccCceeecC-CC-------------
Q 017296 95 NGGLSSNPSLTI----------KTNSYHFCKLSLVKEPYANAKQANEPKD-CYEREVGETVDTD-SL------------- 149 (374)
Q Consensus 95 ~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~------------- 149 (374)
++++. ...+ +.+......+.+................ .++...+...... ..
T Consensus 129 ~~~~~---~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~vlWd~~~~~~~~~~~~~~~~g~~~~~~~~~ 205 (902)
T 2oaj_A 129 RDQLS---SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEK 205 (902)
T ss_dssp TTEEE---EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEEEEETTTTEEEEEECCCBCTTCCCSTTCCC
T ss_pred CCccc---cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcEEEECCCCceEEEEecccCCcCCCcccccc
Confidence 76421 0000 0000001111111000000000000000 1111111110000 00
Q ss_pred ---CCCC----CCCCCCCCceEEEcccCCCeEEEEecCCCceeEE--ec---cCc------------c--CCCCCc----
Q 017296 150 ---CDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTR--LH---QNS------------C--GGSPNF---- 199 (374)
Q Consensus 150 ---~~~~----~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~--~~---~~~------------~--~~~~~~---- 199 (374)
.+.. ..+.++ +. ++++++.|++|++||+++++.+.. +. .+. . .....+
T Consensus 206 ~~~~h~~~V~~v~fspd-g~-~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~ 283 (902)
T 2oaj_A 206 TNEKRTPKVIQSLYHPN-SL-HIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCEN 283 (902)
T ss_dssp TTSCBCCCEEEEEECTT-SS-EEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECS
T ss_pred cccccCCCeEEEEEcCC-CC-EEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecC
Confidence 0000 112223 23 466778899999999999876542 21 000 0 000001
Q ss_pred CCCCCcc-------------eeEEEe----------------------------------------eecCCC------CC
Q 017296 200 SSKGRGM-------------CMAVQA----------------------------------------YLPSKS------QG 220 (374)
Q Consensus 200 ~~~~~~~-------------~~~~~~----------------------------------------~~~~~~------~~ 220 (374)
.+....+ ++.... +.+..+ .+
T Consensus 284 ~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d 363 (902)
T 2oaj_A 284 NPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHN 363 (902)
T ss_dssp STTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBS
T ss_pred CCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCC
Confidence 0000000 000000 000000 11
Q ss_pred ceEEEEEecCCcEEEEeccCCCCcee------eeecCccCeEE----------------------------------EEE
Q 017296 221 FVNVLAGYEDGSILVWDIRNPGIPLT------AMKVHLEPVLC----------------------------------LSI 260 (374)
Q Consensus 221 ~~~~~~gs~dg~i~iwdl~~~~~~~~------~~~~h~~~v~~----------------------------------~~~ 260 (374)
...+++++.||+|++||+.+...... .+..|..+|++ ++|
T Consensus 364 ~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~ 443 (902)
T 2oaj_A 364 PGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLP 443 (902)
T ss_dssp CSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCC
T ss_pred ceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccc
Confidence 12577888999999999854211111 12233344444 445
Q ss_pred ecCCCceEEEecCCeEEEEEcCCCCCe--EEEEEeee-----cCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCC---
Q 017296 261 DESCNGGISGGADQKIVLYNLDHSTGS--CVIKKEIN-----LERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG--- 330 (374)
Q Consensus 261 ~~~~~~~~s~s~D~~i~lwd~~~~~~~--~~~~~~~~-----~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~--- 330 (374)
+|++..+++|+.|++|++||+...... ..+...+. .|...|.+++|+||+++||+|+.||+|+|||+.++
T Consensus 444 spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~ 523 (902)
T 2oaj_A 444 AEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFY 523 (902)
T ss_dssp CSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC-
T ss_pred cccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCcccc
Confidence 567778999999999999999754211 11111111 56678999999999999999999999999999765
Q ss_pred ------------------------------------------eEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 331 ------------------------------------------SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 331 ------------------------------------------~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
+++.++.+|.+.|++|+|+||| +||+|+.|++|+|||
T Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd 602 (902)
T 2oaj_A 524 SVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLID 602 (902)
T ss_dssp --------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEE
T ss_pred CccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEE
Confidence 2467888999999999999999 999999999999999
Q ss_pred CCCC
Q 017296 369 LYPP 372 (374)
Q Consensus 369 ~~~~ 372 (374)
+..+
T Consensus 603 ~~~~ 606 (902)
T 2oaj_A 603 RRGP 606 (902)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 8654
No 60
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.8e-33 Score=270.52 Aligned_cols=340 Identities=15% Similarity=0.161 Sum_probs=216.1
Q ss_pred CCCeEEeecCCC---ceeEEEEeCC-CCEEEEecCCCcEEEEeCcccceeeee-e---eeeceeeeEEeccCCcccccee
Q 017296 8 PDPVAVLRGHRA---SVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSS-W---VHSAAHGIVSVATGPSIGLNKV 79 (374)
Q Consensus 8 ~~~~~~l~gH~~---~V~~l~~~~~-~~~l~s~s~D~~v~vWd~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~l 79 (374)
.+++..+.+|.. .|++++|+|+ +++|++++.|+.|++||+.+++.+..+ . .|. ..+.++.++ +++.+
T Consensus 193 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--~~v~~~~~~---~~~~l 267 (615)
T 1pgu_A 193 FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ--GGIFALSWL---DSQKF 267 (615)
T ss_dssp BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCC--SCEEEEEES---SSSEE
T ss_pred cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccC--CceEEEEEc---CCCEE
Confidence 456788999999 9999999999 999999999999999999998887776 3 454 347777776 45799
Q ss_pred eeccccCeEEEEecCCCCCCCCCceeeeec----ceeeeeeeeeccccccccccCCCCcccccccCce------------
Q 017296 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTN----SYHFCKLSLVKEPYANAKQANEPKDCYEREVGET------------ 143 (374)
Q Consensus 80 ~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 143 (374)
++++.|++|++||+.+++... ..... ......+...................+....+..
T Consensus 268 ~~~~~d~~i~~wd~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~ 343 (615)
T 1pgu_A 268 ATVGADATIRVWDVTTSKCVQ----KWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGIT 343 (615)
T ss_dssp EEEETTSEEEEEETTTTEEEE----EEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEE
T ss_pred EEEcCCCcEEEEECCCCcEEE----EEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEE
Confidence 999999999999998764311 11100 0000000000000000000000000000000000
Q ss_pred ---------------eecCC-----CCCCCC--CCCCCCCceEEEcccCCCeEEEEecCCCceeE---Eec--cCc----
Q 017296 144 ---------------VDTDS-----LCDSKD--DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCT---RLH--QNS---- 192 (374)
Q Consensus 144 ---------------~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~---~~~--~~~---- 192 (374)
+.... ..+... ........ .+++++.|+.+++||+.+++... .+. ...
T Consensus 344 ~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~ 422 (615)
T 1pgu_A 344 ALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQ-EYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAV 422 (615)
T ss_dssp EEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTT-CCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEE
T ss_pred EEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCc-EEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEE
Confidence 00000 000000 00001112 23455566777777765432100 000 000
Q ss_pred --c----------CCCC--CcCCCCCcceeEEEeeecCCCCCceEEEEEec-CCcEEEEeccCCCCceeeeecCccCeEE
Q 017296 193 --C----------GGSP--NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE-DGSILVWDIRNPGIPLTAMKVHLEPVLC 257 (374)
Q Consensus 193 --~----------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~-dg~i~iwdl~~~~~~~~~~~~h~~~v~~ 257 (374)
. .... .+.......++ .+. ...+++++. ||.|++||+.........+..|..+|.+
T Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~ 493 (615)
T 1pgu_A 423 LTNDDDLLILQSFTGDIIKSVRLNSPGSAV---SLS------QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSY 493 (615)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSCEEEE---EEC------SSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEE
T ss_pred EeCCCceEEEeccCCceeeecccCCCceEE---EEc------CCEEEEeecCCCeEEEEECCCccccccccCCccCceEE
Confidence 0 0000 00000000010 111 226888999 9999999997532111566789999999
Q ss_pred EEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeec-CCCCeEEEEECC----------CCCEEEEEeCCCeEEEEE
Q 017296 258 LSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL-ERPGISGTSIRP----------DSKIAATAGWDRRVRIYN 326 (374)
Q Consensus 258 ~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~-~~~~v~~~~~sp----------~~~~l~s~~~dg~v~iwd 326 (374)
++|+|++..+++++.|+.|++||++.. ... ..+.. |...+.+++|+| ++++|++++.||+|++||
T Consensus 494 ~~~s~~g~~l~~~~~dg~i~iw~~~~~--~~~--~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~ 569 (615)
T 1pgu_A 494 ISISPSETYIAAGDVMGKILLYDLQSR--EVK--TSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYS 569 (615)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTT--EEE--ECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEE
T ss_pred EEECCCCCEEEEcCCCCeEEEeeCCCC--cce--eEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEE
Confidence 999999999999999999999999643 222 23333 777899999999 999999999999999999
Q ss_pred ccCC-eEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 327 YRKG-SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 327 ~~~~-~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
+.++ +.+..+.+|...|.+++|+|+++ |++++.|++|++|++..
T Consensus 570 ~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 570 VKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVVL 614 (615)
T ss_dssp SSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC-
T ss_pred CCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeeec
Confidence 9987 78888999999999999999999 99999999999999864
No 61
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-32 Score=280.02 Aligned_cols=345 Identities=10% Similarity=0.089 Sum_probs=213.0
Q ss_pred EeecCCCceeEEEEeCC-CCEEEEecCCCcEEEEeCcccceeeeeeeee----------------ceeeeEEeccCCccc
Q 017296 13 VLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQHRTVSSSWVHS----------------AAHGIVSVATGPSIG 75 (374)
Q Consensus 13 ~l~gH~~~V~~l~~~~~-~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~ 75 (374)
.+++|.++|++|+|+|+ +..|++|+.|++| +||+.+++++..+..|. +...+.+++|++ +
T Consensus 146 ~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp--d 222 (902)
T 2oaj_A 146 FPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP--N 222 (902)
T ss_dssp CSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT--T
T ss_pred ccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC--C
Confidence 45789999999999996 4789999999999 99999988777766551 013488899988 5
Q ss_pred cceeeeccccCeEEEEecCCCCCCCCCce---eeee-----------cceeeeeeeeec--cccc-cccccC-CCC----
Q 017296 76 LNKVISQGRDGTVKCWDIENGGLSSNPSL---TIKT-----------NSYHFCKLSLVK--EPYA-NAKQAN-EPK---- 133 (374)
Q Consensus 76 ~~~l~s~~~D~~vrvwd~~~~~~~~~~~~---~~~~-----------~~~~~~~~~~~~--~~~~-~~~~~~-~~~---- 133 (374)
+++|++++.|++|++||+++++......+ ..+. ....+..+.+.. .+.. .....+ ...
T Consensus 223 g~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~ 302 (902)
T 2oaj_A 223 SLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDN 302 (902)
T ss_dssp SSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSC
T ss_pred CCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCC
Confidence 78999999999999999988753210000 0000 000011111100 0100 000000 000
Q ss_pred -cccccccC--------------------ceeecCCCCCCCC--CC------CC-----CCCceEEEcccCCCeEEEEec
Q 017296 134 -DCYEREVG--------------------ETVDTDSLCDSKD--DV------PA-----EGPKYMAVAGEQLSEVEIWDL 179 (374)
Q Consensus 134 -~~~~~~~~--------------------~~~~~~~~~~~~~--~~------~~-----~~~~~~~~~~~~d~~i~vWd~ 179 (374)
....+..+ ............. ++ .+ .++.. +++++.|++|++||+
T Consensus 303 ~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~-l~~~s~dg~l~~~~~ 381 (902)
T 2oaj_A 303 QSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGL-ILLILGNGEIETMLY 381 (902)
T ss_dssp CCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSE-EEEEETTSCEEEEET
T ss_pred ceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCcee-EEEEcCCCcEEEEEC
Confidence 00000000 0000000000000 00 00 11223 344456899999999
Q ss_pred CCCceeEEeccCccCCCCCcCCCCCcceeEE-------------------------------EeeecCCCCCceEEEEEe
Q 017296 180 NTAERCTRLHQNSCGGSPNFSSKGRGMCMAV-------------------------------QAYLPSKSQGFVNVLAGY 228 (374)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~gs 228 (374)
.++............ ...+. ....+++. ..| ++....+++|+
T Consensus 382 ~~g~~~~~~~~~~~~-l~~~~--~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~----spdg~~laSgs 454 (902)
T 2oaj_A 382 PSGIFTDKASLFPQN-LSWLR--PLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLP----AEYGTAFITGH 454 (902)
T ss_dssp TTCCEECCGGGSCGG-GTTBT--TBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCC----CSEEEEEEEEE
T ss_pred CCCCcccccccCCCc-ccccC--CCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccc----cccCcEEEEec
Confidence 877543221000000 00000 00000000 011 12334789999
Q ss_pred cCCcEEEEeccCCCCc---eee--ee-----cCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCC----------e-
Q 017296 229 EDGSILVWDIRNPGIP---LTA--MK-----VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG----------S- 287 (374)
Q Consensus 229 ~dg~i~iwdl~~~~~~---~~~--~~-----~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~----------~- 287 (374)
.||+|++||+...... ... +. +|...|.+++|+|++..+|+|+.||+|+|||++.... .
T Consensus 455 ~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~ 534 (902)
T 2oaj_A 455 SNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDL 534 (902)
T ss_dssp TTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC------------
T ss_pred CCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCccc
Confidence 9999999999754211 011 11 7889999999999999999999999999999964310 0
Q ss_pred ------------------------------EEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEE--E
Q 017296 288 ------------------------------CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA--I 335 (374)
Q Consensus 288 ------------------------------~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~--~ 335 (374)
......+..|...|++++||||| +||+|+.|++|+|||++++..+. .
T Consensus 535 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~ 613 (902)
T 2oaj_A 535 EMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMEN 613 (902)
T ss_dssp ---CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred ceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEee
Confidence 01123455678899999999999 99999999999999998877654 2
Q ss_pred ---ec-ccCCceEEEEEe-----CCC---CEEEEEeCCCcEEEecC
Q 017296 336 ---LK-YHHATCNAVSFS-----SDC---KLMASASEDSTVALWEL 369 (374)
Q Consensus 336 ---~~-~h~~~v~~v~~s-----p~~---~~las~s~D~~v~~W~~ 369 (374)
+. +|.+.|++|+|+ ||| ++|++|+.|++|++|++
T Consensus 614 ~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 614 IREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp GGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred hhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 32 899999999999 886 89999999999999998
No 62
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.6e-31 Score=260.80 Aligned_cols=304 Identities=14% Similarity=0.204 Sum_probs=210.3
Q ss_pred CCeEEeecCCCceeEEEEeCCCC-EEEEecCCCcEEEEeCcccceeeeeeeeece-eeeEEeccCCccc-cceeeecccc
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIVSVATGPSIG-LNKVISQGRD 85 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~-~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~l~s~~~D 85 (374)
+++..+.+|...|++++|+|+++ +|++++.|+.|++||..+++.+..+..|... ..+.++++++ + ++++++++.|
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d 228 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSP--DSGEFVITVGSD 228 (615)
T ss_dssp CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECS--TTCCEEEEEETT
T ss_pred CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECC--CCCCEEEEEeCC
Confidence 56788899999999999999998 8999999999999999998888877766530 0478888887 5 6899999999
Q ss_pred CeEEEEecCCCCCCCCCceeeeec-ceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceE
Q 017296 86 GTVKCWDIENGGLSSNPSLTIKTN-SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (374)
Q Consensus 86 ~~vrvwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (374)
++|++||+.+++... .+... ..|.. .+... .+. +.. +
T Consensus 229 g~i~vwd~~~~~~~~----~~~~~~~~~~~---------------------------~v~~~--------~~~--~~~-~ 266 (615)
T 1pgu_A 229 RKISCFDGKSGEFLK----YIEDDQEPVQG---------------------------GIFAL--------SWL--DSQ-K 266 (615)
T ss_dssp CCEEEEETTTCCEEE----ECCBTTBCCCS---------------------------CEEEE--------EES--SSS-E
T ss_pred CeEEEEECCCCCEeE----EecccccccCC---------------------------ceEEE--------EEc--CCC-E
Confidence 999999998764211 00000 00000 00000 011 112 4
Q ss_pred EEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCc
Q 017296 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (374)
Q Consensus 165 ~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~ 244 (374)
+++++.|+.|++||+++++.+..+..... ........+ .+ + ....+++++.||.|++||++. ..+
T Consensus 267 l~~~~~d~~i~~wd~~~~~~~~~~~~~~~--------~~~~~~~~~-~~-~----~~~~l~~~~~~g~i~~~d~~~-~~~ 331 (615)
T 1pgu_A 267 FATVGADATIRVWDVTTSKCVQKWTLDKQ--------QLGNQQVGV-VA-T----GNGRIISLSLDGTLNFYELGH-DEV 331 (615)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECCTT--------CGGGCEEEE-EE-E----ETTEEEEEETTSCEEEEETTE-EEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEcCCCC--------cccCceeEE-Ee-C----CCCeEEEEECCCCEEEEECCC-CcE
Confidence 56677789999999999987776653210 000111111 11 1 112577788888888888764 334
Q ss_pred eeeeecCccCeEEEEEecC---------------------------------CCceEEEecCCeEEEEEcCCC-------
Q 017296 245 LTAMKVHLEPVLCLSIDES---------------------------------CNGGISGGADQKIVLYNLDHS------- 284 (374)
Q Consensus 245 ~~~~~~h~~~v~~~~~~~~---------------------------------~~~~~s~s~D~~i~lwd~~~~------- 284 (374)
+..+.+|..+|.++.+ ++ +..+++++.|+.+++||+...
T Consensus 332 ~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~ 410 (615)
T 1pgu_A 332 LKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPK 410 (615)
T ss_dssp EEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEE
T ss_pred EEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCce
Confidence 4455555555544444 22 445666666666666665321
Q ss_pred -------------------------------------------------------CCeEE--------EE-EeeecCCCC
Q 017296 285 -------------------------------------------------------TGSCV--------IK-KEINLERPG 300 (374)
Q Consensus 285 -------------------------------------------------------~~~~~--------~~-~~~~~~~~~ 300 (374)
.+... .. .....|...
T Consensus 411 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~ 490 (615)
T 1pgu_A 411 VASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAK 490 (615)
T ss_dssp EEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSC
T ss_pred EEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCc
Confidence 00000 00 223345677
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecc-cCCceEEEEEeC----------CCCEEEEEeCCCcEEEecC
Q 017296 301 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY-HHATCNAVSFSS----------DCKLMASASEDSTVALWEL 369 (374)
Q Consensus 301 v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~v~~sp----------~~~~las~s~D~~v~~W~~ 369 (374)
+.+++|+|++++|++++.||.|++||+.+++.+..+.+ |...|.+++|+| ++++||+++.|++|++|++
T Consensus 491 v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~ 570 (615)
T 1pgu_A 491 PSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSV 570 (615)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEES
T ss_pred eEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEEC
Confidence 99999999999999999999999999999999988888 999999999999 9999999999999999999
Q ss_pred CCC
Q 017296 370 YPP 372 (374)
Q Consensus 370 ~~~ 372 (374)
..+
T Consensus 571 ~~~ 573 (615)
T 1pgu_A 571 KRP 573 (615)
T ss_dssp SCT
T ss_pred CCC
Confidence 754
No 63
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-33 Score=265.24 Aligned_cols=266 Identities=12% Similarity=0.112 Sum_probs=184.8
Q ss_pred CCCeEEeecCCCceeEEEEeCCC---------CEEEE-------------------ecCCCcEEEEeCccccee----ee
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTK---------PILFA-------------------GTTGGELRIWDTVQHRTV----SS 55 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~---------~~l~s-------------------~s~D~~v~vWd~~~~~~~----~~ 55 (374)
.+...++. +.+.|.+|+|+|++ .+|++ ++.|++|+|||+.+++.. ..
T Consensus 124 ~r~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~ 202 (524)
T 2j04_B 124 KRRGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQT 202 (524)
T ss_dssp CSCEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEE
T ss_pred CcceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEE
Confidence 34444554 78999999999876 45554 668899999998776532 22
Q ss_pred eeeeeceeeeEEeccCCc----cccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCC
Q 017296 56 SWVHSAAHGIVSVATGPS----IGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANE 131 (374)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~----~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (374)
+..|. ..+..++|++. +++..|+|++.|++||+||+.++..... ... . .
T Consensus 203 l~~~~--~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~--~~~----------~-~------------ 255 (524)
T 2j04_B 203 IVHSF--GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH--VFK----------M-C------------ 255 (524)
T ss_dssp EEECC--CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS--EEE----------C-C------------
T ss_pred EEecC--CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccc--cce----------e-e------------
Confidence 33332 34778888874 2356899999999999999976532100 000 0 0
Q ss_pred CCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEE
Q 017296 132 PKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQ 211 (374)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (374)
..+. ....+. .....+ .
T Consensus 256 ---------------------------~~p~-~~l~~h--------------------------------~~~v~s---v 272 (524)
T 2j04_B 256 ---------------------------EKPS-LTLSLA--------------------------------DSLITT---F 272 (524)
T ss_dssp ---------------------------CSCS-EEECCT--------------------------------TTCEEE---E
T ss_pred ---------------------------cCce-EEEEcC--------------------------------CCCEEE---E
Confidence 0000 000000 000011 1
Q ss_pred eeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEE--EEecCC-CceEEEecCCeEEEEEcCCCCCeE
Q 017296 212 AYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL--SIDESC-NGGISGGADQKIVLYNLDHSTGSC 288 (374)
Q Consensus 212 ~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~--~~~~~~-~~~~s~s~D~~i~lwd~~~~~~~~ 288 (374)
.+.+. ..|++|+.||+|++||++.+..+...+.+|..+|.++ .+.+++ ..++|+|.|++|+|||++......
T Consensus 273 ~~s~~-----~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~ 347 (524)
T 2j04_B 273 DFLSP-----TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK 347 (524)
T ss_dssp EESSS-----SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC
T ss_pred EecCC-----CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc
Confidence 12221 1589999999999999986555666788999999999 457776 778999999999999996432221
Q ss_pred EEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 289 VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 289 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
.+... .....+.+++|+|+++.+++++.|++|++||+++++.+.++.+|.+.|++|+|+|+|++|||||.|++|++|+
T Consensus 348 ~~~~~--~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 348 TTVSR--FRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITN 425 (524)
T ss_dssp EEEEE--CSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCB
T ss_pred ccccc--cccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEe
Confidence 22111 1112478899999999999999999999999999988888889999999999999999999999999999999
Q ss_pred CCC
Q 017296 369 LYP 371 (374)
Q Consensus 369 ~~~ 371 (374)
...
T Consensus 426 ~~~ 428 (524)
T 2j04_B 426 AAR 428 (524)
T ss_dssp SCS
T ss_pred chH
Confidence 743
No 64
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.5e-31 Score=240.79 Aligned_cols=259 Identities=17% Similarity=0.249 Sum_probs=181.4
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
.++..+++|...|++++|+|++++|+||+.|++|++||+.+++.+..+.+|.. .+.++++++ +++.+++|+.|++|
T Consensus 56 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~--~v~~~~~~~--~~~~l~s~s~D~~i 131 (319)
T 3frx_A 56 VPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKS--DVMSVDIDK--KASMIISGSRDKTI 131 (319)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS--CEEEEEECT--TSCEEEEEETTSCE
T ss_pred ccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC--cEEEEEEcC--CCCEEEEEeCCCeE
Confidence 35778999999999999999999999999999999999999998888887764 488888877 56799999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||++.... ..+..+......+ ...+.. .......+++++
T Consensus 132 ~vwd~~~~~~-----~~~~~h~~~v~~~--------------------~~~~~~--------------~~~~~~~~l~s~ 172 (319)
T 3frx_A 132 KVWTIKGQCL-----ATLLGHNDWVSQV--------------------RVVPNE--------------KADDDSVTIISA 172 (319)
T ss_dssp EEEETTSCEE-----EEECCCSSCEEEE--------------------EECCC--------------------CCEEEEE
T ss_pred EEEECCCCeE-----EEEeccCCcEEEE--------------------EEccCC--------------CCCCCccEEEEE
Confidence 9999964210 0000000000000 000000 000112356778
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~ 248 (374)
+.|++|++||+++.+....+..+. ....+ ..+.++ ...+++|+.||+|++||++. ...+..+
T Consensus 173 ~~d~~i~~wd~~~~~~~~~~~~h~----------~~v~~---~~~sp~----g~~l~s~~~dg~i~iwd~~~-~~~~~~~ 234 (319)
T 3frx_A 173 GNDKMVKAWNLNQFQIEADFIGHN----------SNINT---LTASPD----GTLIASAGKDGEIMLWNLAA-KKAMYTL 234 (319)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCC----------SCEEE---EEECTT----SSEEEEEETTCEEEEEETTT-TEEEEEE
T ss_pred eCCCEEEEEECCcchhheeecCCC----------CcEEE---EEEcCC----CCEEEEEeCCCeEEEEECCC-CcEEEEe
Confidence 889999999999987766654321 11111 124332 23699999999999999986 4455556
Q ss_pred ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee----ecCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q 017296 249 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI----NLERPGISGTSIRPDSKIAATAGWDRRVRI 324 (374)
Q Consensus 249 ~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~s~~~dg~v~i 324 (374)
. +..+|.+++|+|++..+++++ ++.+++|+++.......+.... ..+...+.+++|+||+++|++|+.||+|++
T Consensus 235 ~-~~~~v~~~~~sp~~~~la~~~-~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~v 312 (319)
T 3frx_A 235 S-AQDEVFSLAFSPNRYWLAAAT-ATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRV 312 (319)
T ss_dssp E-CCSCEEEEEECSSSSEEEEEE-TTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred c-CCCcEEEEEEcCCCCEEEEEc-CCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEE
Confidence 5 457899999999988776665 5569999986432111111111 123456889999999999999999999999
Q ss_pred EEccCC
Q 017296 325 YNYRKG 330 (374)
Q Consensus 325 wd~~~~ 330 (374)
||+.++
T Consensus 313 Wd~~t~ 318 (319)
T 3frx_A 313 WQVMTA 318 (319)
T ss_dssp EEEEEC
T ss_pred EEEeec
Confidence 998764
No 65
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.1e-31 Score=265.33 Aligned_cols=294 Identities=16% Similarity=0.196 Sum_probs=220.8
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
+...++.+|.+.|++++|+|++.+|++|+.||.|+|||..+++.+..+.+|. ..+.+++|++ ++++|++++.|++|
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~--~~v~~~~~s~--~~~~l~~~~~dg~i 79 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTE--TPVRAGKFIA--RKNWIIVGSDDFRI 79 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEEEG--GGTEEEEEETTSEE
T ss_pred ccceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCC--CcEEEEEEeC--CCCEEEEEeCCCeE
Confidence 5678999999999999999999999999999999999999998888877765 3588888887 67899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+.+++... .+..+..... +.. +.+++ . .++++
T Consensus 80 ~vw~~~~~~~~~----~~~~~~~~v~--------------------~~~------------------~s~~~-~-~l~~~ 115 (814)
T 3mkq_A 80 RVFNYNTGEKVV----DFEAHPDYIR--------------------SIA------------------VHPTK-P-YVLSG 115 (814)
T ss_dssp EEEETTTCCEEE----EEECCSSCEE--------------------EEE------------------ECSSS-S-EEEEE
T ss_pred EEEECCCCcEEE----EEecCCCCEE--------------------EEE------------------EeCCC-C-EEEEE
Confidence 999998874210 1100000000 000 11122 2 35567
Q ss_pred cCCCeEEEEecCCCc-eeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 169 EQLSEVEIWDLNTAE-RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
+.|++|++||++++. ....+..+ .....++ .+.+. +...+++++.||.|++||++........
T Consensus 116 ~~dg~i~vw~~~~~~~~~~~~~~~----------~~~v~~~---~~~p~---~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 179 (814)
T 3mkq_A 116 SDDLTVKLWNWENNWALEQTFEGH----------EHFVMCV---AFNPK---DPSTFASGCLDRTVKVWSLGQSTPNFTL 179 (814)
T ss_dssp ETTSEEEEEEGGGTSEEEEEEECC----------SSCEEEE---EEETT---EEEEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred cCCCEEEEEECCCCceEEEEEcCC----------CCcEEEE---EEEcC---CCCEEEEEeCCCeEEEEECCCCcceeEE
Confidence 788999999999874 33343321 1111222 23331 2336899999999999999764433333
Q ss_pred eecCccCeEEEEEec--CCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEE
Q 017296 248 MKVHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIY 325 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~--~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iw 325 (374)
...+..++.++.+++ ++..+++++.|++|++||++.. .. ...+..|...+.+++|+|+++++++++.||+|++|
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vw 255 (814)
T 3mkq_A 180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK--SC--VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIW 255 (814)
T ss_dssp ECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT--EE--EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred ecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC--cE--EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 334458999999988 8889999999999999998653 22 23445677789999999999999999999999999
Q ss_pred EccCCeEEEEecccCCceEEEEEeCCCC--EEEEEeCCCcEEEecCCC
Q 017296 326 NYRKGSALAILKYHHATCNAVSFSSDCK--LMASASEDSTVALWELYP 371 (374)
Q Consensus 326 d~~~~~~~~~~~~h~~~v~~v~~sp~~~--~las~s~D~~v~~W~~~~ 371 (374)
|+.+++.+..+..|...+.+++|+|+++ ++++++ |+.+.+|++..
T Consensus 256 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 302 (814)
T 3mkq_A 256 NSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVLSLGN 302 (814)
T ss_dssp ETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEEECSC
T ss_pred ECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEEEcCC
Confidence 9999999999999999999999999997 455555 66788888753
No 66
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=2.5e-32 Score=254.50 Aligned_cols=283 Identities=13% Similarity=0.119 Sum_probs=198.6
Q ss_pred CceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCC
Q 017296 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGL 98 (374)
Q Consensus 19 ~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~ 98 (374)
..+++++|+|++++|++++.|+.|++||..+++....+..|. ......+++ ++++|++++.|++|++||+.+++.
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~---~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~ 131 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRAD---YTAVDTAKL--QMRRFILGTTEGDIKVLDSNFNLQ 131 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCC---EEEEEEECS--SSCEEEEEETTSCEEEECTTSCEE
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCC---ceEEEEEec--CCCEEEEEECCCCEEEEeCCCcce
Confidence 345589999999999999999999999998877655544431 122334454 568999999999999999986531
Q ss_pred CCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEe
Q 017296 99 SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWD 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd 178 (374)
. .....|... ..+.. +.++ .. ++++++.|++|++||
T Consensus 132 ~-------~~~~~h~~~-----------------v~~~~------------------~~~~-~~-~l~s~s~d~~i~iwd 167 (420)
T 3vl1_A 132 R-------EIDQAHVSE-----------------ITKLK------------------FFPS-GE-ALISSSQDMQLKIWS 167 (420)
T ss_dssp E-------EETTSSSSC-----------------EEEEE------------------ECTT-SS-EEEEEETTSEEEEEE
T ss_pred e-------eecccccCc-----------------cEEEE------------------ECCC-CC-EEEEEeCCCeEEEEe
Confidence 1 000000000 00000 1111 22 456777899999999
Q ss_pred cCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeec---CccCe
Q 017296 179 LNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKV---HLEPV 255 (374)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~---h~~~v 255 (374)
+++++.+..+..+. ....++ .+.++ ...+++++.||+|++||+++. .....+.. |...+
T Consensus 168 ~~~~~~~~~~~~h~----------~~v~~~---~~~~~----~~~l~s~~~d~~v~iwd~~~~-~~~~~~~~~~~~~~~v 229 (420)
T 3vl1_A 168 VKDGSNPRTLIGHR----------ATVTDI---AIIDR----GRNVLSASLDGTIRLWECGTG-TTIHTFNRKENPHDGV 229 (420)
T ss_dssp TTTCCCCEEEECCS----------SCEEEE---EEETT----TTEEEEEETTSCEEEEETTTT-EEEEEECBTTBTTCCE
T ss_pred CCCCcCceEEcCCC----------CcEEEE---EEcCC----CCEEEEEcCCCcEEEeECCCC-ceeEEeecCCCCCCCc
Confidence 99988776664321 111222 24432 236889999999999999863 44555553 44455
Q ss_pred EEEE---------------------EecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCC-EE
Q 017296 256 LCLS---------------------IDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK-IA 313 (374)
Q Consensus 256 ~~~~---------------------~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l 313 (374)
.++. |++++..+++++.||.|++||++... ... .....+...+.+++|+|+++ +|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~--~~~-~~~~~~~~~v~~~~~~~~~~~~l 306 (420)
T 3vl1_A 230 NSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKE--QTI-QLPSKFTCSCNSLTVDGNNANYI 306 (420)
T ss_dssp EEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCC--EEE-EECCTTSSCEEEEEECSSCTTEE
T ss_pred cEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCc--eeE-EcccccCCCceeEEEeCCCCCEE
Confidence 5554 46777889999999999999997543 221 22234567899999999999 99
Q ss_pred EEEeCCCeEEEEEccCCeE-EEEecc-cCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 314 ATAGWDRRVRIYNYRKGSA-LAILKY-HHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 314 ~s~~~dg~v~iwd~~~~~~-~~~~~~-h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
++|+.||+|++||+.+++. +..+.. |...|.++.| |++++|++++.|++|++|++..+
T Consensus 307 ~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 307 YAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp EEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCT
T ss_pred EEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCC
Confidence 9999999999999988754 667776 5677887755 68899999999999999998653
No 67
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.9e-31 Score=241.64 Aligned_cols=284 Identities=15% Similarity=0.200 Sum_probs=184.7
Q ss_pred CCCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCcccccee-eecccc
Q 017296 7 PPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRD 85 (374)
Q Consensus 7 ~~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~D 85 (374)
..+++..+.+|..+|++|+|+|+|++|++|+.|+ ++|||..+++.+..... . ++..+.+.+. .+.+ ++++.|
T Consensus 8 ~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~--~--~~~~~~~~~~--~~~~~~~~~~d 80 (355)
T 3vu4_A 8 TRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEM--R--HLSKVRMLHR--TNYVAFVTGVK 80 (355)
T ss_dssp -----------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEEC--S--CCCEEEECTT--SSEEEEECSST
T ss_pred ccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeec--C--CeEEEEEcCC--CCEEEEEECCc
Confidence 3456778899999999999999999999998775 78999887765443221 1 2333344432 2444 678889
Q ss_pred CeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEE
Q 017296 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (374)
Q Consensus 86 ~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (374)
++|++||+.+++... .+. .......+ .. .+..++
T Consensus 81 ~~v~iWd~~~~~~~~----~~~-~~~~v~~v--------------------~~---------------------~~~~~~ 114 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVS----RIK-VDAPVKDL--------------------FL---------------------SREFIV 114 (355)
T ss_dssp TEEEEEETTTTEEEE----EEE-CSSCEEEE--------------------EE---------------------CSSEEE
T ss_pred cEEEEEECCCCcEEE----EEE-CCCceEEE--------------------EE---------------------cCCEEE
Confidence 999999998764210 000 00000000 00 011223
Q ss_pred EcccCCCeEEEEecCCC-ceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEE--EecCCcEEEEeccCCC
Q 017296 166 VAGEQLSEVEIWDLNTA-ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA--GYEDGSILVWDIRNPG 242 (374)
Q Consensus 166 ~~~~~d~~i~vWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--gs~dg~i~iwdl~~~~ 242 (374)
++ .++.|++||+.++ +.+..+.. ...+..+.+ . .++. |+.||.|++||++...
T Consensus 115 ~~--~~~~i~i~d~~~~~~~~~~~~~----------------~~~~~~~s~----~--~la~~sg~~~g~v~iwd~~~~~ 170 (355)
T 3vu4_A 115 VS--YGDVISVFKFGNPWKRITDDIR----------------FGGVCEFSN----G--LLVYSNEFNLGQIHITKLQSSG 170 (355)
T ss_dssp EE--ETTEEEEEESSTTCCBSSCCEE----------------EEEEEEEET----T--EEEEEESSCTTCEEEEECCC--
T ss_pred EE--EcCEEEEEECCCCceeeEEecc----------------CCceEEEEc----c--EEEEeCCCcCcEEEEEECCCCC
Confidence 33 2578999999987 44333221 011112222 1 2333 7899999999997532
Q ss_pred --------------Cc-eeeeecCccCeEEEEEecCCCceEEEecCCe-EEEEEcCCCCCeEEEEEeee-c-CCCCeEEE
Q 017296 243 --------------IP-LTAMKVHLEPVLCLSIDESCNGGISGGADQK-IVLYNLDHSTGSCVIKKEIN-L-ERPGISGT 304 (374)
Q Consensus 243 --------------~~-~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~-i~lwd~~~~~~~~~~~~~~~-~-~~~~v~~~ 304 (374)
.+ +..+.+|..+|.+++|+|++..+++++.|++ |++||++... +. ..+. . |...|.++
T Consensus 171 ~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~--~~--~~~~~g~h~~~v~~~ 246 (355)
T 3vu4_A 171 SATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGV--LV--REFRRGLDRADVVDM 246 (355)
T ss_dssp ----------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCC--EE--EEEECTTCCSCEEEE
T ss_pred ccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCc--EE--EEEEcCCCCCcEEEE
Confidence 12 6678899999999999999999999999998 9999997543 32 2333 2 67789999
Q ss_pred EECCCCCEEEEEeCCCeEEEEEccCCeE--EEEec---------------------ccCCceEEEEEeCCCCEEEEEeCC
Q 017296 305 SIRPDSKIAATAGWDRRVRIYNYRKGSA--LAILK---------------------YHHATCNAVSFSSDCKLMASASED 361 (374)
Q Consensus 305 ~~sp~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~---------------------~h~~~v~~v~~sp~~~~las~s~D 361 (374)
+|+|++++|++++.|++|++||+..+.. ...+. .+......++|+|||++|++++.|
T Consensus 247 ~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~d 326 (355)
T 3vu4_A 247 KWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHT 326 (355)
T ss_dssp EECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTT
T ss_pred EECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCC
Confidence 9999999999999999999999976431 11111 111233668999999999999999
Q ss_pred CcEEEecCCC
Q 017296 362 STVALWELYP 371 (374)
Q Consensus 362 ~~v~~W~~~~ 371 (374)
|.+++|++.+
T Consensus 327 g~~~~~~~~~ 336 (355)
T 3vu4_A 327 RMIETFKVVF 336 (355)
T ss_dssp TEEEEEEEEE
T ss_pred CeEEEEEEEc
Confidence 9999998754
No 68
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3e-32 Score=286.94 Aligned_cols=352 Identities=15% Similarity=0.214 Sum_probs=234.2
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
.+++..+.+|.+.|++++|+|++++|++++.|++|+|||+.+++.+..+.+|. ..+.+++|++..+...+++|+.|++
T Consensus 647 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~l~sg~~d~~ 724 (1249)
T 3sfz_A 647 GEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHS--EQVNCCHFTNKSNHLLLATGSNDFF 724 (1249)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS--SCEEEEEECSSSSCCEEEEEETTSC
T ss_pred CCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC--CcEEEEEEecCCCceEEEEEeCCCe
Confidence 46788999999999999999999999999999999999999999888887775 3588888888656678999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeecccc---------------------ccccccC--------------CC
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPY---------------------ANAKQAN--------------EP 132 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~--------------~~ 132 (374)
|++||+.++++.. .+..+......+.+..... ....... ..
T Consensus 725 v~vwd~~~~~~~~----~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1249)
T 3sfz_A 725 LKLWDLNQKECRN----TMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVI 800 (1249)
T ss_dssp EEEEETTSSSEEE----EECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCC
T ss_pred EEEEECCCcchhh----eecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccce
Confidence 9999998875321 0000000000000000000 0000000 00
Q ss_pred CcccccccC--------------------ceeecCCCCCCC----CCCCCCCCceEEEcccCCCeEEEEecCCCceeEEe
Q 017296 133 KDCYEREVG--------------------ETVDTDSLCDSK----DDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL 188 (374)
Q Consensus 133 ~~~~~~~~~--------------------~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~ 188 (374)
..+..+.+. .........+.. ..+ .++.. ++++++.|+.|++||+.+++.+..+
T Consensus 801 v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~-sp~~~-~l~~~~~dg~v~vwd~~~~~~~~~~ 878 (1249)
T 3sfz_A 801 VKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDF-SPYDH-LAVIALSQYCVELWNIDSRLKVADC 878 (1249)
T ss_dssp BCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEE-CSSTT-EEEEECSSSCEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEE-cCCCC-EEEEEeCCCeEEEEEcCCCceeeec
Confidence 000000000 000000000000 011 12223 4556677899999999998776665
Q ss_pred ccCccC-CCCCcCCCCCccee-----------------------------------------------------------
Q 017296 189 HQNSCG-GSPNFSSKGRGMCM----------------------------------------------------------- 208 (374)
Q Consensus 189 ~~~~~~-~~~~~~~~~~~~~~----------------------------------------------------------- 208 (374)
..+... ....+++.+..+..
T Consensus 879 ~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 958 (1249)
T 3sfz_A 879 RGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDY 958 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEE
T ss_pred CCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEE
Confidence 433210 11111111110000
Q ss_pred ------EEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcC
Q 017296 209 ------AVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLD 282 (374)
Q Consensus 209 ------~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~ 282 (374)
....+. +....+++|+.||.|++||+.. ......+.+|..+|.++.|++++..+++++.|++|++||+.
T Consensus 959 ~~~~~i~~~~~s----p~g~~l~~g~~~g~i~i~d~~~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 959 LPEAQVSCCCLS----PHLEYVAFGDEDGAIKIIELPN-NRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp ECCSCEEEEEEC----TTSSEEEEEETTSCCEEEETTT-TSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred cccCcEEEEEEc----CCCCEEEEEcCCCCEEEEEcCC-CceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 000111 1223577888888888888875 44566778899999999999999999999999999999986
Q ss_pred CCCCe--------E----------E------------------EEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q 017296 283 HSTGS--------C----------V------------------IKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 326 (374)
Q Consensus 283 ~~~~~--------~----------~------------------~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd 326 (374)
..... . . ....+..|...+.+++|+|+++++++++.||+|++||
T Consensus 1034 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd 1113 (1249)
T 3sfz_A 1034 TGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWS 1113 (1249)
T ss_dssp TTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEEC
T ss_pred CCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 42100 0 0 0012334666788999999999999999999999999
Q ss_pred ccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 327 YRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 327 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
+.+++.+..+.+|...|.+++|+|||++||+++.|++|++|++..+
T Consensus 1114 ~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~ 1159 (1249)
T 3sfz_A 1114 FDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDG 1159 (1249)
T ss_dssp SSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSS
T ss_pred CCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 9999999999999999999999999999999999999999998654
No 69
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.1e-30 Score=235.39 Aligned_cols=250 Identities=20% Similarity=0.312 Sum_probs=182.7
Q ss_pred eeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCC
Q 017296 52 TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANE 131 (374)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (374)
...++.+|.. .|.+++|++ ++++|++++.|++|++||+.+++.. ..+........
T Consensus 47 ~~~~l~gH~~--~v~~~~~s~--d~~~l~s~s~Dg~v~iWd~~~~~~~----~~~~~~~~~v~----------------- 101 (340)
T 1got_B 47 TRRTLRGHLA--KIYAMHWGT--DSRLLLSASQDGKLIIWDSYTTNKV----HAIPLRSSWVM----------------- 101 (340)
T ss_dssp EEEEECCCSS--CEEEEEECT--TSSEEEEEETTTEEEEEETTTCCEE----EEEECSSSCEE-----------------
T ss_pred hheeecCCCC--ceEEEEECC--CCCEEEEEeCCCcEEEEECCCCCcc----eEeecCCccEE-----------------
Confidence 3455666753 588888887 6789999999999999999876321 01100000000
Q ss_pred CCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCce----eEEeccCccCCCCCcCCCCCcce
Q 017296 132 PKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAER----CTRLHQNSCGGSPNFSSKGRGMC 207 (374)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 207 (374)
+. .+.+ +.. ++++++.|+.+++||+.+++. ...+..+ .....+
T Consensus 102 ---~~------------------~~s~-~~~-~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h----------~~~v~~ 148 (340)
T 1got_B 102 ---TC------------------AYAP-SGN-YVACGGLDNICSIYNLKTREGNVRVSRELAGH----------TGYLSC 148 (340)
T ss_dssp ---EE------------------EECT-TSS-EEEEEETTCEEEEEETTTCSBSCEEEEEEECC----------SSCEEE
T ss_pred ---EE------------------EECC-CCC-EEEEEeCCCeEEEEECccCCCcceeEEEecCC----------CccEEE
Confidence 00 0111 123 456677899999999987642 2222211 111111
Q ss_pred eEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCe
Q 017296 208 MAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGS 287 (374)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~ 287 (374)
+ .+.++ + .+++++.|++|++||+++ ......+.+|..+|.+++|+|++..+++|+.|++|++||++...
T Consensus 149 ~---~~~~~---~--~l~s~s~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~-- 217 (340)
T 1got_B 149 C---RFLDD---N--QIVTSSGDTTCALWDIET-GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGM-- 217 (340)
T ss_dssp E---EEEET---T--EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS--
T ss_pred E---EECCC---C--cEEEEECCCcEEEEECCC-CcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCe--
Confidence 1 23322 2 488999999999999976 45677888999999999999999999999999999999997543
Q ss_pred EEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecc--cCCceEEEEEeCCCCEEEEEeCCCcEE
Q 017296 288 CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY--HHATCNAVSFSSDCKLMASASEDSTVA 365 (374)
Q Consensus 288 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~las~s~D~~v~ 365 (374)
+ ...+..|...|.+++|+|++++|++|+.||+|++||+++++.+..+.. +...|.+++|+|+|++|++|+.|++|+
T Consensus 218 ~--~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~ 295 (340)
T 1got_B 218 C--RQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCN 295 (340)
T ss_dssp E--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred e--EEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEE
Confidence 2 234556778899999999999999999999999999999888776652 235799999999999999999999999
Q ss_pred EecCCCC
Q 017296 366 LWELYPP 372 (374)
Q Consensus 366 ~W~~~~~ 372 (374)
+||+..+
T Consensus 296 vwd~~~~ 302 (340)
T 1got_B 296 VWDALKA 302 (340)
T ss_dssp EEETTTC
T ss_pred EEEcccC
Confidence 9998543
No 70
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.3e-30 Score=233.43 Aligned_cols=288 Identities=17% Similarity=0.212 Sum_probs=207.6
Q ss_pred CCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCC
Q 017296 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG 96 (374)
Q Consensus 17 H~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~ 96 (374)
|.++|.+++|+|+|++++.+..++.+.+|+............|. ..+.++++++ +++.+++++ |++|++||+.++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~--~~~~l~~~~-dg~i~iw~~~~~ 82 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHG--EVVCAVTISN--PTRHVYTGG-KGCVKVWDISHP 82 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCS--SCCCEEEECS--SSSEEEEEC-BSEEEEEETTST
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCC--CceEEEEEec--CCcEEEEcC-CCeEEEEECCCC
Confidence 67889999999999999999888888888765544333333454 4577888887 667888888 999999999876
Q ss_pred CCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEE
Q 017296 97 GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEI 176 (374)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~v 176 (374)
+.... ....... .+ . ....+.. +.+ +.. ++++++.|+.|++
T Consensus 83 ~~~~~-~~~~~~~-~~----------~-------~~v~~~~------------------~~~-~~~-~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 83 GNKSP-VSQLDCL-NR----------D-------NYIRSCK------------------LLP-DGC-TLIVGGEASTLSI 123 (337)
T ss_dssp TCCSC-SEEEECS-CT----------T-------SBEEEEE------------------ECT-TSS-EEEEEESSSEEEE
T ss_pred Cceee-eeccccc-CC----------C-------CcEEEEE------------------EcC-CCC-EEEEEcCCCcEEE
Confidence 42211 0000000 00 0 0000000 111 223 3456677899999
Q ss_pred EecCCCc--eeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccC
Q 017296 177 WDLNTAE--RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEP 254 (374)
Q Consensus 177 Wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~ 254 (374)
||+++++ ....+..+ .....++ .+.++ ...+++++.||.|++||+++ ......+..|..+
T Consensus 124 ~d~~~~~~~~~~~~~~~----------~~~i~~~---~~~~~----~~~l~~~~~dg~v~~~d~~~-~~~~~~~~~~~~~ 185 (337)
T 1gxr_A 124 WDLAAPTPRIKAELTSS----------APACYAL---AISPD----SKVCFSCCSDGNIAVWDLHN-QTLVRQFQGHTDG 185 (337)
T ss_dssp EECCCC--EEEEEEECS----------SSCEEEE---EECTT----SSEEEEEETTSCEEEEETTT-TEEEEEECCCSSC
T ss_pred EECCCCCcceeeecccC----------CCceEEE---EECCC----CCEEEEEeCCCcEEEEeCCC-CceeeeeecccCc
Confidence 9999876 33333221 1111111 23332 23688999999999999986 4566778889999
Q ss_pred eEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEE
Q 017296 255 VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA 334 (374)
Q Consensus 255 v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~ 334 (374)
+.++.+++++..+++++.|+.|++||++.. ..... .. +...+.+++|+|+++++++++.|+.|++||+.+++..
T Consensus 186 i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~--~~~~~--~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~- 259 (337)
T 1gxr_A 186 ASCIDISNDGTKLWTGGLDNTVRSWDLREG--RQLQQ--HD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY- 259 (337)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTT--EEEEE--EE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-
T ss_pred eEEEEECCCCCEEEEEecCCcEEEEECCCC--ceEee--ec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-
Confidence 999999999999999999999999999754 22221 22 3457999999999999999999999999999887754
Q ss_pred EecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 335 ILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 335 ~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
.+..|...|.+++|+|++++|++++.|+.|++|++...
T Consensus 260 ~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~ 297 (337)
T 1gxr_A 260 QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYG 297 (337)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred EEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCC
Confidence 57789999999999999999999999999999998654
No 71
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.9e-32 Score=245.78 Aligned_cols=282 Identities=14% Similarity=0.170 Sum_probs=169.6
Q ss_pred EEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccc------cCeEEEEecCCCCC
Q 017296 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR------DGTVKCWDIENGGL 98 (374)
Q Consensus 25 ~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~------D~~vrvwd~~~~~~ 98 (374)
.+.+++ ++++++.+.....|++....+ ..|. ..|.+++|++ |+++|+|++. |+++++|+..++..
T Consensus 12 d~g~~~-~~~~~~g~~~~~~w~~p~~~p----~~H~--~~V~~v~fSp--DG~~las~s~d~~~~wd~~v~~~~~~~~~~ 82 (357)
T 4g56_B 12 DLGTEN-LYFQSNGSSKGSAWGRPVTAP----ACME--VQIGAVRYRR--DGALLLAASSLSSRTWGGSIWVFKDPEGAP 82 (357)
T ss_dssp ---------------------------------CCC--SEEEEEEECS--SSCEEEEEECSSSSSCCEEEEEESSCC---
T ss_pred CCCccc-eEEecCCCccccccCCCCCCc----cccc--CCEEEEEECC--CCCEEEEEcCCCCccccCeEEEEECCCCCc
Confidence 555555 445555578889999754322 2354 3488999988 7889999987 77899998877632
Q ss_pred CCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEe
Q 017296 99 SSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWD 178 (374)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd 178 (374)
................ +. .+.++ .+ ++ +++.|++|+|||
T Consensus 83 ~~~~~~~~~~~~~~V~--------------------~~------------------~~s~d-~~-~l-~~s~dg~v~lWd 121 (357)
T 4g56_B 83 NESLCTAGVQTEAGVT--------------------DV------------------AWVSE-KG-IL-VASDSGAVELWE 121 (357)
T ss_dssp CGGGCSEEEECSSCEE--------------------EE------------------EEETT-TE-EE-EEETTSCEEEC-
T ss_pred ceeEecccCCCCCCEE--------------------EE------------------EEcCC-CC-EE-EEECCCEEEEee
Confidence 1100000000000000 00 01112 22 23 455689999999
Q ss_pred cCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEE
Q 017296 179 LNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL 258 (374)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~ 258 (374)
+.+++........ ...+.....++ .|.++ ...+++|+.||+|++||+++ ...+..+++|...|.++
T Consensus 122 ~~~~~~~~~~~~~------~~~h~~~V~~v---~~spd----g~~l~sgs~dg~v~iwd~~~-~~~~~~~~~h~~~v~~v 187 (357)
T 4g56_B 122 ILEKESLLVNKFA------KYEHDDIVKTL---SVFSD----GTQAVSGGKDFSVKVWDLSQ-KAVLKSYNAHSSEVNCV 187 (357)
T ss_dssp -------CCCCEE------ECCCSSCEEEE---EECSS----SSEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEE
T ss_pred ccccceeEEEeec------cCCCCCCEEEE---EECCC----CCEEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEE
Confidence 9987643222100 00111122222 34432 23689999999999999986 45677889999999999
Q ss_pred EEecCCC-ceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCC-CCEEEEEeCCCeEEEEEccCCeEEEEe
Q 017296 259 SIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAIL 336 (374)
Q Consensus 259 ~~~~~~~-~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~s~~~dg~v~iwd~~~~~~~~~~ 336 (374)
+|++++. .+++++.|++|++||++..... .......+...+.+++|+|+ +.+|++|+.|++|++||+++++.+.++
T Consensus 188 ~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~--~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 188 AACPGKDTIFLSCGEDGRILLWDTRKPKPA--TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTS 265 (357)
T ss_dssp EECTTCSSCEEEEETTSCEEECCTTSSSCB--CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEE
T ss_pred EEccCCCceeeeeccCCceEEEECCCCcee--eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEE
Confidence 9988764 5789999999999999754322 11222334556899999997 568899999999999999999999999
Q ss_pred cccCCceEEEEEeCCC-CEEEEEeCCCcEEEecCCCC
Q 017296 337 KYHHATCNAVSFSSDC-KLMASASEDSTVALWELYPP 372 (374)
Q Consensus 337 ~~h~~~v~~v~~sp~~-~~las~s~D~~v~~W~~~~~ 372 (374)
.+|...|.+++|+|++ ++|||+|.|++|+|||+..+
T Consensus 266 ~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~ 302 (357)
T 4g56_B 266 AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS 302 (357)
T ss_dssp CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC
T ss_pred eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC
Confidence 9999999999999998 58999999999999998653
No 72
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.7e-31 Score=244.99 Aligned_cols=272 Identities=19% Similarity=0.277 Sum_probs=189.2
Q ss_pred CCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeee
Q 017296 39 GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSL 118 (374)
Q Consensus 39 D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (374)
+..+..|+.....+..++.+|.. .|.+++|++ ++++|+||+.|++|++||+.+++.. ..++ .|.
T Consensus 45 ~~~~~~~~~~~~~~~~~l~gH~~--~V~~~~~sp--~~~~l~s~s~D~~v~iWd~~~~~~~----~~~~---~h~----- 108 (380)
T 3iz6_a 45 GRTAVSFNPTDLVCCRTLQGHSG--KVYSLDWTP--EKNWIVSASQDGRLIVWNALTSQKT----HAIK---LHC----- 108 (380)
T ss_dssp GGGCCCCCCCCCEEEEEECCCSS--CEEEEEECT--TSSCEEEEETTSEEEEEETTTTEEE----EEEE---CCC-----
T ss_pred cccccccccceeEEeeccccccc--EEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCccc----eEEe---cCC-----
Confidence 44566788877777788888864 488999988 5689999999999999999876311 0000 000
Q ss_pred eccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCC
Q 017296 119 VKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPN 198 (374)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~ 198 (374)
. ...+ ..+.+ ++. ++++|+.|+.+++||+.+......... ......+
T Consensus 109 -----~-------~v~~------------------~~~s~-~g~-~las~~~d~~v~iw~~~~~~~~~~~~~-~~~~~~g 155 (380)
T 3iz6_a 109 -----P-------WVME------------------CAFAP-NGQ-SVACGGLDSACSIFNLSSQADRDGNMP-VSRVLTG 155 (380)
T ss_dssp -----T-------TCCC------------------CEECT-TSS-EEEECCSSSCCEEEECCCCSSCCCSST-TCCBCCC
T ss_pred -----C-------CEEE------------------EEECC-CCC-EEEEeeCCCcEEEEECCCCccccCCcc-ceeeccC
Confidence 0 0000 00112 223 456778899999999976431100000 0000001
Q ss_pred cCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee-----ecCccCeEEEEEec-CCCceEEEec
Q 017296 199 FSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM-----KVHLEPVLCLSIDE-SCNGGISGGA 272 (374)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~-----~~h~~~v~~~~~~~-~~~~~~s~s~ 272 (374)
+. ....++ .+.+. ....+++|+.|++|++||+++. ..+..+ .+|...|.++.+++ ++..+++|+.
T Consensus 156 h~--~~v~~~---~~~~~---~~~~l~s~s~D~~i~~wd~~~~-~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~ 226 (380)
T 3iz6_a 156 HK--GYASSC---QYVPD---QETRLITGSGDQTCVLWDVTTG-QRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC 226 (380)
T ss_dssp CS--SCCCCC---BCCSS---SSSCEEEECTTSCEEEECTTTC-CEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred CC--cceEEE---EEecC---CCCEEEEECCCCcEEEEEcCCC-cEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC
Confidence 11 111111 12222 2225899999999999999864 344444 57899999999975 6778999999
Q ss_pred CCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCC-------ceEE
Q 017296 273 DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA-------TCNA 345 (374)
Q Consensus 273 D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~-------~v~~ 345 (374)
|++|++||++.... . ...+..|...|.+++|+|++++|++|+.||+|++||+++++.+..+..+.. .|.+
T Consensus 227 D~~v~~wd~~~~~~-~--~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 227 DTTVRLWDLRITSR-A--VRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp TSCEEEEETTTTCC-C--CEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSE
T ss_pred CCeEEEEECCCCCc-c--eEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEE
Confidence 99999999963321 1 123456778899999999999999999999999999999999888765542 4899
Q ss_pred EEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 346 VSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 346 v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
++|+|+|++|++|+.|+.|++||+..
T Consensus 304 ~~~s~~g~~l~~g~~dg~i~vwd~~~ 329 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNGDCYVWDTLL 329 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEETTT
T ss_pred EEECCCCCEEEEEECCCCEEEEECCC
Confidence 99999999999999999999999754
No 73
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-31 Score=267.96 Aligned_cols=260 Identities=18% Similarity=0.215 Sum_probs=196.8
Q ss_pred eEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCc--ccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 11 ~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
+.++.||.++|++++|+|++++|++|+.||+|+|||+. +++.+..+.+|. ..|.++++++..+++.+++|+.||+|
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~--~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCS--SCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCc--CceEEEEecCCCCCCEEEEEeCCCeE
Confidence 46789999999999999999999999999999999987 445666666665 45888888875447899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+.+++.. .+.. . .+
T Consensus 80 ~vwd~~~~~~~-----~~~~----------~-----------------------------------------------~~ 97 (753)
T 3jro_A 80 LIWKEENGRWS-----QIAV----------H-----------------------------------------------AV 97 (753)
T ss_dssp EEEEEETTEEE-----EEEE----------E-----------------------------------------------CC
T ss_pred EEEECCCCccc-----cccc----------c-----------------------------------------------cC
Confidence 99999765200 0000 0 00
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC-Cceee
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG-IPLTA 247 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~-~~~~~ 247 (374)
....| .+ ..+.++. ....+++|+.||.|++||++... .....
T Consensus 98 -h~~~V-------------------------------~~---v~~sp~~--~~~~l~sgs~dg~I~vwdl~~~~~~~~~~ 140 (753)
T 3jro_A 98 -HSASV-------------------------------NS---VQWAPHE--YGPLLLVASSDGKVSVVEFKENGTTSPII 140 (753)
T ss_dssp -CSSCE-------------------------------EE---EEECCGG--GCSEEEEEETTSEEEEEECCSSSCCCCEE
T ss_pred -CCCCe-------------------------------EE---EEECCCC--CCCEEEEEeCCCcEEEEEeecCCCcceeE
Confidence 00000 00 0111110 01258899999999999998652 23455
Q ss_pred eecCccCeEEEEEec-------------CCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCC---CC
Q 017296 248 MKVHLEPVLCLSIDE-------------SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD---SK 311 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~-------------~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~ 311 (374)
+.+|..+|.++.++| ++..+++|+.||+|++||++...........+..|...|.+++|+|+ ++
T Consensus 141 ~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~ 220 (753)
T 3jro_A 141 IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS 220 (753)
T ss_dssp EECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE
T ss_pred eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC
Confidence 678999999999998 47889999999999999998765544455566778889999999999 89
Q ss_pred EEEEEeCCCeEEEEEccCCe-----EEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 312 IAATAGWDRRVRIYNYRKGS-----ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 312 ~l~s~~~dg~v~iwd~~~~~-----~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
++++++.||+|++||+.+++ .+.....|...|.+++|+|+|++|++++.|+.|++|++..
T Consensus 221 ~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 221 YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 99999999999999998764 3333456889999999999999999999999999999874
No 74
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.98 E-value=7e-30 Score=232.40 Aligned_cols=261 Identities=16% Similarity=0.239 Sum_probs=177.1
Q ss_pred eecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccc--eeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEE
Q 017296 14 LRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCW 91 (374)
Q Consensus 14 l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvw 91 (374)
..+|.+.|++|+|+|++++|++|+.|+++++||..++. ++..+.+|. ..+.+++|++ ++++|++++.|++|++|
T Consensus 57 ~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~--~~v~~v~~sp--~~~~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 57 SEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHE--NEVKSVAWAP--SGNLLATCSRDKSVWVW 132 (345)
T ss_dssp CSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCS--SCEEEEEECT--TSSEEEEEETTSCEEEE
T ss_pred ccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCC--CCceEEEEeC--CCCEEEEEECCCeEEEE
Confidence 47999999999999999999999999999999987653 456666665 3588889987 67899999999999999
Q ss_pred ecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCC
Q 017296 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (374)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 171 (374)
|+.++.. ...+.....|... ..+.. +.+. .. ++++++.|
T Consensus 133 d~~~~~~----~~~~~~~~~h~~~-----------------v~~~~------------------~~p~-~~-~l~s~s~d 171 (345)
T 3fm0_A 133 EVDEEDE----YECVSVLNSHTQD-----------------VKHVV------------------WHPS-QE-LLASASYD 171 (345)
T ss_dssp EECTTSC----EEEEEEECCCCSC-----------------EEEEE------------------ECSS-SS-CEEEEETT
T ss_pred ECCCCCC----eEEEEEecCcCCC-----------------eEEEE------------------ECCC-CC-EEEEEeCC
Confidence 9976521 0011100000000 00000 1111 22 35677789
Q ss_pred CeEEEEecCCCce--eEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC------
Q 017296 172 SEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI------ 243 (374)
Q Consensus 172 ~~i~vWd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~------ 243 (374)
++|++||+++++. ...+..+ . ....+ ..|.++ + ..|++|+.||+|++||+..+..
T Consensus 172 ~~i~~w~~~~~~~~~~~~~~~h--------~--~~v~~---l~~sp~---g-~~l~s~s~D~~v~iW~~~~~~~~~~~~~ 234 (345)
T 3fm0_A 172 DTVKLYREEEDDWVCCATLEGH--------E--STVWS---LAFDPS---G-QRLASCSDDRTVRIWRQYLPGNEQGVAC 234 (345)
T ss_dssp SCEEEEEEETTEEEEEEEECCC--------S--SCEEE---EEECTT---S-SEEEEEETTSCEEEEEEECTTCTTCCCC
T ss_pred CcEEEEEecCCCEEEEEEecCC--------C--CceEE---EEECCC---C-CEEEEEeCCCeEEEeccccCCCCcccee
Confidence 9999999988753 2333321 1 11111 134432 2 3689999999999999754321
Q ss_pred --------ceeeeec-CccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCC----eEEEE-EeeecCCCCeEEEEECCC
Q 017296 244 --------PLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG----SCVIK-KEINLERPGISGTSIRPD 309 (374)
Q Consensus 244 --------~~~~~~~-h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~----~~~~~-~~~~~~~~~v~~~~~sp~ 309 (374)
.+..+.+ |...|.+++|++++..+++++.|+.|++|+.+.... ...+. .....|...|.+++|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~ 314 (345)
T 3fm0_A 235 SGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPK 314 (345)
T ss_dssp C---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSS
T ss_pred eccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCC
Confidence 1223333 888999999999999999999999999999864321 11111 122457788999999998
Q ss_pred C-CEEEEEeCCCeEEEEEccCCeEEEEe
Q 017296 310 S-KIAATAGWDRRVRIYNYRKGSALAIL 336 (374)
Q Consensus 310 ~-~~l~s~~~dg~v~iwd~~~~~~~~~~ 336 (374)
+ .+|||++.||+|++|++.+++.+...
T Consensus 315 ~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 315 EPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp STTEEEEEETTSCEEEEEECC-------
T ss_pred CceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 7 49999999999999999888766544
No 75
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.1e-30 Score=233.25 Aligned_cols=259 Identities=18% Similarity=0.201 Sum_probs=167.9
Q ss_pred CeEEe-ec-CCCceeEEEEeCCCCEEEEecCCCcEEEEeCcc-------cceeeeeeeeeceeeeEEeccCCccccceee
Q 017296 10 PVAVL-RG-HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-------HRTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (374)
Q Consensus 10 ~~~~l-~g-H~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (374)
++.++ .+ |.++|++|+|+|++++|++|+.|++|+|||... .+.+..+.+|. ..+.+++|++ ++++|+
T Consensus 48 ~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~--~~V~~v~~sp--~g~~la 123 (330)
T 2hes_X 48 LIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHE--NEVKGVAWSN--DGYYLA 123 (330)
T ss_dssp EEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC------CEEEEEECT--TSCEEE
T ss_pred EEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCC--CcEEEEEECC--CCCEEE
Confidence 44555 45 999999999999999999999999999999843 23455566665 3588899987 578999
Q ss_pred eccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCC
Q 017296 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEG 160 (374)
Q Consensus 81 s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (374)
+++.|++|++||+..+... ...+.....|... ..+.. +.+ +
T Consensus 124 s~s~D~~v~iwd~~~~~~~---~~~~~~~~~h~~~-----------------v~~v~------------------~~p-~ 164 (330)
T 2hes_X 124 TCSRDKSVWIWETDESGEE---YECISVLQEHSQD-----------------VKHVI------------------WHP-S 164 (330)
T ss_dssp EEETTSCEEEEECCTTCCC---CEEEEEECCCSSC-----------------EEEEE------------------ECS-S
T ss_pred EEeCCCEEEEEeccCCCCC---eEEEEEeccCCCc-----------------eEEEE------------------ECC-C
Confidence 9999999999999543110 0011100000000 00000 111 1
Q ss_pred CceEEEcccCCCeEEEEecCCC--ceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEec
Q 017296 161 PKYMAVAGEQLSEVEIWDLNTA--ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (374)
Q Consensus 161 ~~~~~~~~~~d~~i~vWd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl 238 (374)
.. ++++++.|++|++||+.++ +++..+..+. ....+ ..|.++. ....+++|+.|++|++||+
T Consensus 165 ~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~----------~~v~~---~~~~~~~--~~~~l~s~s~D~~v~iw~~ 228 (330)
T 2hes_X 165 EA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHE----------GTVWS---SDFDKTE--GVFRLCSGSDDSTVRVWKY 228 (330)
T ss_dssp SS-EEEEEETTSCEEEEEEETTEEEEEEEECCCS----------SCEEE---EEECCSS--SSCEEEEEETTSCEEEEEE
T ss_pred CC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCC----------CcEEE---EEecCCC--CeeEEEEEeCCCeEEEEEe
Confidence 12 4677888999999998876 3455553321 11111 1344331 1235899999999999999
Q ss_pred cCCC-------Cceeeeec-CccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCC-CeEEEEECC-
Q 017296 239 RNPG-------IPLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP-GISGTSIRP- 308 (374)
Q Consensus 239 ~~~~-------~~~~~~~~-h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~-~v~~~~~sp- 308 (374)
+... .....+.. |..+|.+++|++.+ .+++++.|++|++||........ .......|.. .+.+++|+|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~-~~~~~~~h~~~~v~~v~~~~~ 306 (330)
T 2hes_X 229 MGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKV-FAKRALCHGVYEINVVKWLEL 306 (330)
T ss_dssp EEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEE-EEEESCTTTTSCEEEEEEC--
T ss_pred cCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEE-EeccccccccceEEEEEEecC
Confidence 6421 12233444 89999999998654 68999999999999986432111 1122344554 799999999
Q ss_pred -CCCEEEEEeCCCeEEEEEccC
Q 017296 309 -DSKIAATAGWDRRVRIYNYRK 329 (374)
Q Consensus 309 -~~~~l~s~~~dg~v~iwd~~~ 329 (374)
++++||+|+.||+|++||+++
T Consensus 307 ~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 307 NGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ---CCEEEEETTSEEEEEEC--
T ss_pred CCceEEEEecCCCcEEEEEecc
Confidence 789999999999999999864
No 76
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.98 E-value=9.1e-30 Score=235.79 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=177.5
Q ss_pred ceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCC
Q 017296 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLS 99 (374)
Q Consensus 20 ~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~ 99 (374)
.|++++|+|+|++|++|+.|++|+|||+.+++.+..+.+|.. .+.+++|++ ++++|++++.|++|++||++++++.
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~--~v~~~~~~p--~~~~l~s~s~d~~v~iwd~~~~~~~ 200 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQ--DIYSLDYFP--SGDKLVSGSGDRTVRIWDLRTGQCS 200 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEE
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCC--CEEEEEEcC--CCCEEEEecCCCcEEEEECCCCeeE
Confidence 499999999999999999999999999999888888777753 488888887 5689999999999999999876321
Q ss_pred CCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEec
Q 017296 100 SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDL 179 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~ 179 (374)
..+.... ... + + .+.+.++. ++++++.|++|++||+
T Consensus 201 ----~~~~~~~-~v~--------------------~--------~----------~~~~~~~~-~l~~~s~d~~v~iwd~ 236 (393)
T 1erj_A 201 ----LTLSIED-GVT--------------------T--------V----------AVSPGDGK-YIAAGSLDRAVRVWDS 236 (393)
T ss_dssp ----EEEECSS-CEE--------------------E--------E----------EECSTTCC-EEEEEETTSCEEEEET
T ss_pred ----EEEEcCC-CcE--------------------E--------E----------EEECCCCC-EEEEEcCCCcEEEEEC
Confidence 0000000 000 0 0 01111223 4567788999999999
Q ss_pred CCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC-----------Cceeee
Q 017296 180 NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG-----------IPLTAM 248 (374)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~-----------~~~~~~ 248 (374)
++++.+..+...... ..++ .....+ ..|.++ ...+++|+.||+|++||++... .....+
T Consensus 237 ~~~~~~~~~~~~~~~-~~~h--~~~v~~---v~~~~~----g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~ 306 (393)
T 1erj_A 237 ETGFLVERLDSENES-GTGH--KDSVYS---VVFTRD----GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTY 306 (393)
T ss_dssp TTCCEEEEEC-------CCC--SSCEEE---EEECTT----SSEEEEEETTSEEEEEEC---------------CEEEEE
T ss_pred CCCcEEEeecccccC-CCCC--CCCEEE---EEECCC----CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEE
Confidence 999877665321100 0011 111111 134332 2368999999999999997531 234467
Q ss_pred ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECC------CCCEEEEEeCCCeE
Q 017296 249 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP------DSKIAATAGWDRRV 322 (374)
Q Consensus 249 ~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp------~~~~l~s~~~dg~v 322 (374)
.+|...|.++++++++..+++|+.|++|++||++... .. ..+..|...|.+++|+| ++++|++|+.||+|
T Consensus 307 ~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~--~~--~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i 382 (393)
T 1erj_A 307 IGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGN--PL--LMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA 382 (393)
T ss_dssp ECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCC--EE--EEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEE
T ss_pred ecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCe--EE--EEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcE
Confidence 7899999999999999999999999999999987543 22 34566888899999876 68899999999999
Q ss_pred EEEEccC
Q 017296 323 RIYNYRK 329 (374)
Q Consensus 323 ~iwd~~~ 329 (374)
++|++..
T Consensus 383 ~iW~~~~ 389 (393)
T 1erj_A 383 RIWKYKK 389 (393)
T ss_dssp EEEEEEE
T ss_pred EECcccc
Confidence 9999864
No 77
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=3.5e-31 Score=248.67 Aligned_cols=291 Identities=14% Similarity=0.186 Sum_probs=188.5
Q ss_pred CCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccc-----------eeeeeeeeece----------eeeEEeccCCccc
Q 017296 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHR-----------TVSSSWVHSAA----------HGIVSVATGPSIG 75 (374)
Q Consensus 17 H~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~-----------~~~~~~~~~~~----------~~~~~~~~~~~~~ 75 (374)
|.+.|++|+|+|+|++|++|+.|+.|+|||+.+++ .+..+.+|... ..+.+++|++..+
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 68999999999999999999999999999998776 35566666422 4588889988433
Q ss_pred cceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCC
Q 017296 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDD 155 (374)
Q Consensus 76 ~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (374)
...+++++.|++|++||+.++... ...+ . ........ ..... + ....
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~--------~~~~-----~-~~~~~g~~-----------~~~~~-~-------~~~~ 153 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKR--------PEGY-----N-LKEEDGRY-----------RDPTT-V-------TTLR 153 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEE--------EECC-----S-CC-------------------CCC-C-------CSCC
T ss_pred cceEEEeCCCCeEEEEecccccCC--------ccee-----c-ccCccccc-----------cCccc-c-------cceE
Confidence 368999999999999999764210 0000 0 00000000 00000 0 0000
Q ss_pred CCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEE
Q 017296 156 VPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (374)
Q Consensus 156 ~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~i 235 (374)
+. .+.. .. |.+. ......+.. .+. ....++ .+.++ + ..+++| .||.|++
T Consensus 154 ~~------~~~~----~~---~~~~-~~~~~~~~~-------~h~--~~v~~~---~~~~~---~-~~l~s~-~d~~i~i 202 (447)
T 3dw8_B 154 VP------VFRP----MD---LMVE-ASPRRIFAN-------AHT--YHINSI---SINSD---Y-ETYLSA-DDLRINL 202 (447)
T ss_dssp CC------EEEE----EE---EEEE-EEEEEEECS-------CCS--SCCCEE---EECTT---S-SEEEEE-CSSEEEE
T ss_pred ec------cccc----hh---eeee-ccceEEecc-------CCC--cceEEE---EEcCC---C-CEEEEe-CCCeEEE
Confidence 00 0000 00 0000 001111110 011 111221 23332 2 257788 7999999
Q ss_pred EeccCCCCcee-------eeecCccCeEEEEEecCC-CceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCC--------
Q 017296 236 WDIRNPGIPLT-------AMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP-------- 299 (374)
Q Consensus 236 wdl~~~~~~~~-------~~~~h~~~v~~~~~~~~~-~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~-------- 299 (374)
||++.....+. .+.+|...|.+++|+|++ ..+++++.|++|++||++...........+..+..
T Consensus 203 wd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (447)
T 3dw8_B 203 WHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFS 282 (447)
T ss_dssp EETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHH
T ss_pred EECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCcccccccc
Confidence 99974333333 356899999999999998 88999999999999999765420000112233333
Q ss_pred ----CeEEEEECCCCCEEEEEeCCCeEEEEEccC-CeEEEEecccCCc---------------eEEEEEeCCCCEEEEEe
Q 017296 300 ----GISGTSIRPDSKIAATAGWDRRVRIYNYRK-GSALAILKYHHAT---------------CNAVSFSSDCKLMASAS 359 (374)
Q Consensus 300 ----~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~h~~~---------------v~~v~~sp~~~~las~s 359 (374)
.+.+++|+|++++|++++. ++|++||+.. ++.+..+.+|... +..++|+|++++|++++
T Consensus 283 ~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s 361 (447)
T 3dw8_B 283 EIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGS 361 (447)
T ss_dssp HHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEEC
T ss_pred ccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEec
Confidence 7999999999999999998 9999999987 8888888888642 23489999999999999
Q ss_pred CCCcEEEecCCCC
Q 017296 360 EDSTVALWELYPP 372 (374)
Q Consensus 360 ~D~~v~~W~~~~~ 372 (374)
.|+.|++|++..+
T Consensus 362 ~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 362 YNNFFRMFDRNTK 374 (447)
T ss_dssp STTEEEEEETTTC
T ss_pred cCCEEEEEEcCCC
Confidence 9999999998654
No 78
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.98 E-value=5.2e-30 Score=232.98 Aligned_cols=266 Identities=18% Similarity=0.226 Sum_probs=178.7
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
.+...+.+|...|++++|+|++.+|+||+.|++|++||+.+++.+..+.+|.. .+.++++++ +++++++++.|++|
T Consensus 67 ~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~--~v~~v~~sp--~~~~l~s~~~d~~i 142 (343)
T 2xzm_R 67 IPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQS--EVYSVAFSP--DNRQILSAGAEREI 142 (343)
T ss_dssp EEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCS--CEEEEEECS--STTEEEEEETTSCE
T ss_pred cccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC--cEEEEEECC--CCCEEEEEcCCCEE
Confidence 35678999999999999999999999999999999999999998888877763 588889987 66899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+..... ........|...+ .+..+.+.. .......+. ..+++++
T Consensus 143 ~~wd~~~~~~-----~~~~~~~~~~~~v-----------------~~~~~~~~~--------~~~~~~~~~--~~~l~s~ 190 (343)
T 2xzm_R 143 KLWNILGECK-----FSSAEKENHSDWV-----------------SCVRYSPIM--------KSANKVQPF--APYFASV 190 (343)
T ss_dssp EEEESSSCEE-----EECCTTTSCSSCE-----------------EEEEECCCC--------CSCSCCCSS--CCEEEEE
T ss_pred EEEeccCCce-----eeeecccCCCcee-----------------eeeeecccc--------ccccccCCC--CCEEEEE
Confidence 9999963210 0000000000000 000000000 000000011 1246677
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~ 248 (374)
+.|++|++||. +.+....+..+ . ....+ ..+.++ ...|++|+.||.|++||++....+...+
T Consensus 191 ~~d~~i~iwd~-~~~~~~~~~~h--------~--~~v~~---~~~s~~----g~~l~sgs~dg~v~iwd~~~~~~~~~~~ 252 (343)
T 2xzm_R 191 GWDGRLKVWNT-NFQIRYTFKAH--------E--SNVNH---LSISPN----GKYIATGGKDKKLLIWDILNLTYPQREF 252 (343)
T ss_dssp ETTSEEEEEET-TTEEEEEEECC--------S--SCEEE---EEECTT----SSEEEEEETTCEEEEEESSCCSSCSEEE
T ss_pred cCCCEEEEEcC-CCceeEEEcCc--------c--ccceE---EEECCC----CCEEEEEcCCCeEEEEECCCCcccceee
Confidence 88999999994 34444444321 1 11111 134332 2369999999999999996544444433
Q ss_pred ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEe---------eecCCCCeEEEEECCCCCEEEEEeCC
Q 017296 249 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE---------INLERPGISGTSIRPDSKIAATAGWD 319 (374)
Q Consensus 249 ~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~---------~~~~~~~v~~~~~sp~~~~l~s~~~d 319 (374)
.+...|.+++|+|++.. ++++.|+.|++||+............ ...|...+.+++|+|++++|++|+.|
T Consensus 253 -~~~~~v~~v~~sp~~~~-la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~D 330 (343)
T 2xzm_R 253 -DAGSTINQIAFNPKLQW-VAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTD 330 (343)
T ss_dssp -ECSSCEEEEEECSSSCE-EEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETT
T ss_pred -cCCCcEEEEEECCCCCE-EEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCC
Confidence 35667999999998765 55667999999999754332211111 11455679999999999999999999
Q ss_pred CeEEEEEccCC
Q 017296 320 RRVRIYNYRKG 330 (374)
Q Consensus 320 g~v~iwd~~~~ 330 (374)
|+|++|++.++
T Consensus 331 g~v~~w~~~~g 341 (343)
T 2xzm_R 331 GVIRTFSFETS 341 (343)
T ss_dssp SEEEEEEEEEE
T ss_pred ceEEEEEEEcc
Confidence 99999998764
No 79
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.98 E-value=5.8e-29 Score=227.12 Aligned_cols=251 Identities=18% Similarity=0.323 Sum_probs=180.5
Q ss_pred eeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCC
Q 017296 52 TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANE 131 (374)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (374)
....+.+|.. .|.+++|++ ++++|+||+.|++|++||..+++.. ..+.. + ..
T Consensus 56 ~~~~l~gH~~--~V~~~~~s~--d~~~l~s~s~Dg~v~vWd~~~~~~~----~~~~~---~----------~~------- 107 (354)
T 2pbi_B 56 TRRTLKGHGN--KVLCMDWCK--DKRRIVSSSQDGKVIVWDSFTTNKE----HAVTM---P----------CT------- 107 (354)
T ss_dssp EEEEEECCSS--CEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEE----EEEEC---S----------SS-------
T ss_pred EEEEecCCCC--eEEEEEECC--CCCEEEEEeCCCeEEEEECCCCCcc----eEEec---C----------CC-------
Confidence 3456667764 488899987 5689999999999999998775321 00000 0 00
Q ss_pred CCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCce------eEEeccCccCCCCCcCCCCCc
Q 017296 132 PKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAER------CTRLHQNSCGGSPNFSSKGRG 205 (374)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 205 (374)
...+. .+.++ +. ++++++.|+++++|++..... ...+..+ ...
T Consensus 108 ~v~~~------------------~~sp~-g~-~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h----------~~~- 156 (354)
T 2pbi_B 108 WVMAC------------------AYAPS-GC-AIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMH----------TNY- 156 (354)
T ss_dssp CCCEE------------------EECTT-SS-EEEEESTTSEEEEEECCCCTTCCSGGGCEEEEEC----------SSC-
T ss_pred CEEEE------------------EECCC-CC-EEEEeeCCCCEEEEEEeccccccccccceeeecc----------CCc-
Confidence 00000 01112 22 456778899999999865421 1111111 011
Q ss_pred ceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEec--CCCceEEEecCCeEEEEEcCC
Q 017296 206 MCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDH 283 (374)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~~s~s~D~~i~lwd~~~ 283 (374)
+....|.++ ...+++++.|++|++||+++ ...+..+.+|..+|.++.+.+ ++..+++|+.|++|++||++.
T Consensus 157 --v~~~~~~~~----~~~l~t~s~D~~v~lwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~ 229 (354)
T 2pbi_B 157 --LSACSFTNS----DMQILTASGDGTCALWDVES-GQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS 229 (354)
T ss_dssp --EEEEEECSS----SSEEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT
T ss_pred --EEEEEEeCC----CCEEEEEeCCCcEEEEeCCC-CeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 111223332 23689999999999999986 456778899999999999976 467899999999999999975
Q ss_pred CCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEeccc--CCceEEEEEeCCCCEEEEEeCC
Q 017296 284 STGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH--HATCNAVSFSSDCKLMASASED 361 (374)
Q Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h--~~~v~~v~~sp~~~~las~s~D 361 (374)
.. +. ..+..|...|.+++|+|++++|++++.|++|++||++.++.+..+..+ ...+.+++|+|+|++|++++.|
T Consensus 230 ~~--~~--~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 230 GQ--CV--QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp CC--EE--EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred Cc--EE--EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC
Confidence 43 22 334567788999999999999999999999999999988877766543 3478999999999999999999
Q ss_pred CcEEEecCCCC
Q 017296 362 STVALWELYPP 372 (374)
Q Consensus 362 ~~v~~W~~~~~ 372 (374)
++|++||+..+
T Consensus 306 ~~i~vwd~~~~ 316 (354)
T 2pbi_B 306 YTINVWDVLKG 316 (354)
T ss_dssp SCEEEEETTTC
T ss_pred CcEEEEECCCC
Confidence 99999998543
No 80
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=2.8e-29 Score=222.02 Aligned_cols=182 Identities=12% Similarity=0.067 Sum_probs=126.5
Q ss_pred cCCCeEEEEec-CCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 169 EQLSEVEIWDL-NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 169 ~~d~~i~vWd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
..|++|++|++ +.++.+..+.. +++....+. |.+.. .....+++|+.|++|+|||+++ +..+.+
T Consensus 154 g~d~~V~~~~~s~dG~~~~s~~~--------~~~~v~~l~-----fs~~~-g~~~~LaSgS~D~TIkIWDl~T-Gk~l~t 218 (356)
T 2w18_A 154 LSDQQVEVMTFAEDGGGKENQFL--------MPPEETILT-----FAEVQ-GMQEALLGTTIMNNIVIWNLKT-GQLLKK 218 (356)
T ss_dssp STTCEEEEEEECTTSCEEEEEEE--------CCCSSCEEE-----EEEEE-TSTTEEEEEETTSEEEEEETTT-CCEEEE
T ss_pred CCCCcEEEEEECCCCceeeeecc--------CCCceeeEE-----eeccC-CCCceEEEecCCCcEEEEECCC-CcEEEE
Confidence 46899999999 44776655432 222223222 22210 1223689999999999999986 556777
Q ss_pred eecCc---cCeEEEEEecCCCce------------EEEecCCeEEEEEcCCCCCeEEEEEee---ecCCCCeEEEEECCC
Q 017296 248 MKVHL---EPVLCLSIDESCNGG------------ISGGADQKIVLYNLDHSTGSCVIKKEI---NLERPGISGTSIRPD 309 (374)
Q Consensus 248 ~~~h~---~~v~~~~~~~~~~~~------------~s~s~D~~i~lwd~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~ 309 (374)
+.+|. ..+.+++|+|++..+ ++|+.|++|++||.+. +........ ..|...+.+..+ +
T Consensus 219 L~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t--gk~l~v~~~~~p~Gh~~~~lsg~~--s 294 (356)
T 2w18_A 219 MHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT--TLSVGVMLYCLPPGQAGRFLEGDV--K 294 (356)
T ss_dssp EECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT--TEEEEEEEECCCTTCCCCEEEEEE--E
T ss_pred EcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC--CEEEEEEEeeccCCCcceeEcccc--C
Confidence 77654 367778899888765 6788999999999864 333322111 123323333333 3
Q ss_pred CCEEEEEeCCCeEEEEEccCCeEEEEecccCCceE-EEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 310 SKIAATAGWDRRVRIYNYRKGSALAILKYHHATCN-AVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 310 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~-~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
+.++|+++.|++|+|||+.+++.+.++.+|...+. +++|+|||++|||||.|++||||++
T Consensus 295 g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 295 DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 77899999999999999999999999999987655 5899999999999999999999986
No 81
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=3.2e-29 Score=234.89 Aligned_cols=258 Identities=21% Similarity=0.295 Sum_probs=193.8
Q ss_pred eEEeecCCCceeEEEEeCC-CCEEEEecCCCcEEEEeCcc----------cceeeeeeeeeceeeeEEeccCCccccc-e
Q 017296 11 VAVLRGHRASVTDVCFHQT-KPILFAGTTGGELRIWDTVQ----------HRTVSSSWVHSAAHGIVSVATGPSIGLN-K 78 (374)
Q Consensus 11 ~~~l~gH~~~V~~l~~~~~-~~~l~s~s~D~~v~vWd~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 78 (374)
...+.+|.+.|++|+|+|+ +.+|++++.||.|++||+.+ .+.+..+.+|.. .+.++++++. +. .
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~~~~--~~~~ 196 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK--EGYGLSWNPN--LNGY 196 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS--CCCCEEECTT--STTE
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCC--CeEEEEeCCC--CCCe
Confidence 4567799999999999997 68999999999999999976 455666666653 4777888773 34 8
Q ss_pred eeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCC
Q 017296 79 VISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA 158 (374)
Q Consensus 79 l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (374)
|++|+.||+|++||+..+.... ..+ . +.
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~---~~~------------~--~~----------------------------------- 224 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEH---RVI------------D--AK----------------------------------- 224 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGG---GEE------------E--CS-----------------------------------
T ss_pred EEEEeCCCeEEEEeCCCCCCCC---cee------------c--cc-----------------------------------
Confidence 9999999999999998642100 000 0 00
Q ss_pred CCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEec
Q 017296 159 EGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (374)
Q Consensus 159 ~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl 238 (374)
....+ ..+.| + + ..+.+. +...+++++.||.|++||+
T Consensus 225 -----~~~~~-h~~~v--~-----------------------------~---v~~~p~---~~~~l~s~~~dg~i~i~d~ 261 (430)
T 2xyi_A 225 -----NIFTG-HTAVV--E-----------------------------D---VAWHLL---HESLFGSVADDQKLMIWDT 261 (430)
T ss_dssp -----EEECC-CSSCE--E-----------------------------E---EEECSS---CTTEEEEEETTSEEEEEET
T ss_pred -----eeecC-CCCCE--e-----------------------------e---eEEeCC---CCCEEEEEeCCCeEEEEEC
Confidence 00000 00000 0 0 012211 1225788999999999999
Q ss_pred cCCC--CceeeeecCccCeEEEEEecCCC-ceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCC-EEE
Q 017296 239 RNPG--IPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK-IAA 314 (374)
Q Consensus 239 ~~~~--~~~~~~~~h~~~v~~~~~~~~~~-~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~ 314 (374)
+... .+...+..|..+|++++|++++. .+++|+.|++|++||++..... ...+..|...+.+++|+|+++ +++
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~---~~~~~~h~~~v~~i~~sp~~~~~l~ 338 (430)
T 2xyi_A 262 RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK---LHSFESHKDEIFQVQWSPHNETILA 338 (430)
T ss_dssp TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC---SEEEECCSSCEEEEEECSSCTTEEE
T ss_pred CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCC---eEEeecCCCCEEEEEECCCCCCEEE
Confidence 8652 45667788999999999999887 4789999999999999753221 123445677899999999985 689
Q ss_pred EEeCCCeEEEEEccC--------------CeEEEEecccCCceEEEEEeCCCC-EEEEEeCCCcEEEecCC
Q 017296 315 TAGWDRRVRIYNYRK--------------GSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELY 370 (374)
Q Consensus 315 s~~~dg~v~iwd~~~--------------~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~~W~~~ 370 (374)
+++.|++|++||+.. .+.+..+.+|...|.+++|+|+++ +|++++.|+.|++|++.
T Consensus 339 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 339 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp EEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 999999999999976 366778889999999999999999 99999999999999874
No 82
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.2e-28 Score=220.68 Aligned_cols=252 Identities=19% Similarity=0.339 Sum_probs=182.9
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
.+....+.+|..+|++++|+|++++|++|+.|+.|++||+.+++.+..+.+|.. .+.++.+++ +++.+++++.|++
T Consensus 55 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~--~v~~~~~~~--~~~~l~s~~~d~~ 130 (312)
T 4ery_A 55 GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSN--YVFCCNFNP--QSNLIVSGSFDES 130 (312)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEECS--SSSEEEEEETTSC
T ss_pred cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCC--CEEEEEEcC--CCCEEEEEeCCCc
Confidence 456788999999999999999999999999999999999999988888877753 477888887 5689999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|++||+++++... .+........ +.. +.+ ++. ++++
T Consensus 131 i~iwd~~~~~~~~----~~~~~~~~v~--------------------~~~------------------~~~-~~~-~l~~ 166 (312)
T 4ery_A 131 VRIWDVKTGKCLK----TLPAHSDPVS--------------------AVH------------------FNR-DGS-LIVS 166 (312)
T ss_dssp EEEEETTTCCEEE----EECCCSSCEE--------------------EEE------------------ECT-TSS-EEEE
T ss_pred EEEEECCCCEEEE----EecCCCCcEE--------------------EEE------------------EcC-CCC-EEEE
Confidence 9999998764210 0000000000 000 111 122 4567
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
++.|+.|++||+++++.+..+.... ... +....+.++ ...+++++.||.|++||+++ ...+..
T Consensus 167 ~~~d~~i~~wd~~~~~~~~~~~~~~---------~~~---~~~~~~~~~----~~~l~~~~~d~~i~iwd~~~-~~~~~~ 229 (312)
T 4ery_A 167 SSYDGLCRIWDTASGQCLKTLIDDD---------NPP---VSFVKFSPN----GKYILAATLDNTLKLWDYSK-GKCLKT 229 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCSS---------CCC---EEEEEECTT----SSEEEEEETTTEEEEEETTT-TEEEEE
T ss_pred EeCCCcEEEEECCCCceeeEEeccC---------CCc---eEEEEECCC----CCEEEEEcCCCeEEEEECCC-CcEEEE
Confidence 7789999999999988766653211 001 111234332 23688999999999999986 445666
Q ss_pred eecCccCeEEE--EE-ecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEe--CCCeE
Q 017296 248 MKVHLEPVLCL--SI-DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG--WDRRV 322 (374)
Q Consensus 248 ~~~h~~~v~~~--~~-~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~--~dg~v 322 (374)
+.+|.....++ .+ .+++..+++|+.|+.|++||++... ....+..|...+.+++|+|+++++++++ .|++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i 305 (312)
T 4ery_A 230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE----IVQKLQGHTDVVISTACHPTENIIASAALENDKTI 305 (312)
T ss_dssp ECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC----EEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCE
T ss_pred EEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch----hhhhhhccCCcEEEEeecCcCCceEEEEccCCccE
Confidence 77777654332 33 3566778999999999999997543 2345567778899999999999999987 69999
Q ss_pred EEEEcc
Q 017296 323 RIYNYR 328 (374)
Q Consensus 323 ~iwd~~ 328 (374)
++|+.+
T Consensus 306 ~~W~~d 311 (312)
T 4ery_A 306 KLWKSD 311 (312)
T ss_dssp EEEECC
T ss_pred EEecCC
Confidence 999863
No 83
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.9e-29 Score=229.27 Aligned_cols=240 Identities=12% Similarity=0.070 Sum_probs=169.0
Q ss_pred EeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCcee
Q 017296 26 FHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLT 105 (374)
Q Consensus 26 ~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~ 105 (374)
+.+++.+|+||+.|++|++||+.+++.+..+. ...+.++.+.+. +++++.|++|++|+...
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~----~~~v~~~~~~~~-----~~s~s~D~~i~~w~~~~---------- 104 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT----TPNPRTGGEHPA-----IISRGPCNRLLLLYPGN---------- 104 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE----EECCCTTCCCCS-----EEEECSTTEEEEEETTT----------
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe----cCCceeeeeCCc-----eEEecCCCeEEEEEccC----------
Confidence 34578899999999999999999888776654 123555566552 89999999999999753
Q ss_pred eeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCcee
Q 017296 106 IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERC 185 (374)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~ 185 (374)
.+.+||+.+++.+
T Consensus 105 -------------------------------------------------------------------~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 105 -------------------------------------------------------------------QITILDSKTNKVL 117 (343)
T ss_dssp -------------------------------------------------------------------EEEEEETTTCCEE
T ss_pred -------------------------------------------------------------------ceEEeecCCccee
Confidence 2334444444433
Q ss_pred EEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee-ecCccCeEEEEEecCC
Q 017296 186 TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM-KVHLEPVLCLSIDESC 264 (374)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~-~~h~~~v~~~~~~~~~ 264 (374)
...... + .....++ .+.+. .....+++++.||+|++||++... ..... ..|...+.+++|+|++
T Consensus 118 ~~~~~~-------~--~~~v~~~---~~~~~--~~~~~l~s~s~dg~i~~wd~~~~~-~~~~~~~~~~~~i~~~~~~pdg 182 (343)
T 3lrv_A 118 REIEVD-------S--ANEIIYM---YGHNE--VNTEYFIWADNRGTIGFQSYEDDS-QYIVHSAKSDVEYSSGVLHKDS 182 (343)
T ss_dssp EEEECC-------C--SSCEEEE---ECCC-----CCEEEEEETTCCEEEEESSSSC-EEEEECCCSSCCCCEEEECTTS
T ss_pred EEeecC-------C--CCCEEEE---EcCCC--CCCCEEEEEeCCCcEEEEECCCCc-EEEEEecCCCCceEEEEECCCC
Confidence 332210 0 0011111 12220 012368899999999999998643 34434 3455689999999999
Q ss_pred CceEEEecCCeEEEEEcCCCCCeEEEEEeeec-CCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecc---cC
Q 017296 265 NGGISGGADQKIVLYNLDHSTGSCVIKKEINL-ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY---HH 340 (374)
Q Consensus 265 ~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---h~ 340 (374)
..+++|+.|+.|++||++...... ..+.. |...|.+++|+|++++|++++ |++|++||+++++....+.. |.
T Consensus 183 ~~lasg~~dg~i~iwd~~~~~~~~---~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~ 258 (343)
T 3lrv_A 183 LLLALYSPDGILDVYNLSSPDQAS---SRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPE 258 (343)
T ss_dssp CEEEEECTTSCEEEEESSCTTSCC---EECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC--
T ss_pred CEEEEEcCCCEEEEEECCCCCCCc---cEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccccccc
Confidence 999999999999999997654320 12334 778899999999999999999 55999999998876544443 44
Q ss_pred CceE--EEEEeCCCCEEEEEeC-CCcEEEecCC
Q 017296 341 ATCN--AVSFSSDCKLMASASE-DSTVALWELY 370 (374)
Q Consensus 341 ~~v~--~v~~sp~~~~las~s~-D~~v~~W~~~ 370 (374)
..+. +++|+|+|++|++++. |+.|++|++.
T Consensus 259 ~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 259 FKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp ---CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred ccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 4444 6999999999999998 9999999874
No 84
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=5.3e-28 Score=218.48 Aligned_cols=259 Identities=20% Similarity=0.274 Sum_probs=178.1
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
.+..++++|...|++++|+|++++|++|+.|+.|++|+............+. ..+....+.+ .++.+++++.|+.+
T Consensus 77 ~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~~~~l~s~s~d~~~ 152 (340)
T 4aow_A 77 IPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT--KDVLSVAFSS--DNRQIVSGSRDKTI 152 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS--SCEEEEEECT--TSSCEEEEETTSCE
T ss_pred eeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCC--CceeEEEEee--cCccceeecCCCeE
Confidence 4678899999999999999999999999999999999998776655444333 2344455554 45789999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+..... .......+... ..+ + .+.......+++++
T Consensus 153 ~~~d~~~~~~------~~~~~~~~~~~-----------------v~~--------~----------~~~~~~~~~~~~s~ 191 (340)
T 4aow_A 153 KLWNTLGVCK------YTVQDESHSEW-----------------VSC--------V----------RFSPNSSNPIIVSC 191 (340)
T ss_dssp EEECTTSCEE------EEECSSSCSSC-----------------EEE--------E----------EECSCSSSCEEEEE
T ss_pred EEEEeCCCce------EEEEeccccCc-----------------ccc--------e----------EEccCCCCcEEEEE
Confidence 9999865311 00000000000 000 0 01112223456778
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~ 248 (374)
+.|++|++||+++++....+..+. ....++ .+.++ ...+++|+.||.|++||++.. ..+..+
T Consensus 192 ~~d~~i~i~d~~~~~~~~~~~~h~----------~~v~~~---~~s~~----~~~l~s~s~Dg~i~iwd~~~~-~~~~~~ 253 (340)
T 4aow_A 192 GWDKLVKVWNLANCKLKTNHIGHT----------GYLNTV---TVSPD----GSLCASGGKDGQAMLWDLNEG-KHLYTL 253 (340)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCS----------SCEEEE---EECTT----SSEEEEEETTCEEEEEETTTT-EEEEEE
T ss_pred cCCCEEEEEECCCCceeeEecCCC----------CcEEEE---EECCC----CCEEEEEeCCCeEEEEEeccC-ceeeee
Confidence 889999999999998777664321 111121 24332 236899999999999999863 445555
Q ss_pred ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEE-----EeeecCCCCeEEEEECCCCCEEEEEeCCCeEE
Q 017296 249 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIK-----KEINLERPGISGTSIRPDSKIAATAGWDRRVR 323 (374)
Q Consensus 249 ~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~-----~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~ 323 (374)
. +...+.++.+++++ .+++++.|+.|++||++.......+. .....|...|.+++|+||+++|++|+.||+|+
T Consensus 254 ~-~~~~v~~~~~~~~~-~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~ 331 (340)
T 4aow_A 254 D-GGDIINALCFSPNR-YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVR 331 (340)
T ss_dssp E-CSSCEEEEEECSSS-SEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEE
T ss_pred c-CCceEEeeecCCCC-ceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 4 45789999998876 46788899999999997542211111 12235667899999999999999999999999
Q ss_pred EEEccCCeE
Q 017296 324 IYNYRKGSA 332 (374)
Q Consensus 324 iwd~~~~~~ 332 (374)
|||+.+|++
T Consensus 332 iW~~~tGtr 340 (340)
T 4aow_A 332 VWQVTIGTR 340 (340)
T ss_dssp EEEEEC---
T ss_pred EEeCCCcCC
Confidence 999998863
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=3.5e-28 Score=245.19 Aligned_cols=296 Identities=17% Similarity=0.213 Sum_probs=212.8
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
.+++..+.+|..+|++++|+|++++|++|+.|+.|+|||..+++.+..+..|. ..+.+++|++ +++.+++++.|++
T Consensus 45 ~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~--~~v~~~~~s~--~~~~l~~~~~dg~ 120 (814)
T 3mkq_A 45 QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHP--DYIRSIAVHP--TKPYVLSGSDDLT 120 (814)
T ss_dssp TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCS--SCEEEEEECS--SSSEEEEEETTSE
T ss_pred CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCC--CCEEEEEEeC--CCCEEEEEcCCCE
Confidence 45778899999999999999999999999999999999999998888877665 3588888887 5678999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|++||+.++... ......+.... .+..+. +.+ ..++++
T Consensus 121 i~vw~~~~~~~~---~~~~~~~~~~v--------------------~~~~~~------------------p~~-~~~l~~ 158 (814)
T 3mkq_A 121 VKLWNWENNWAL---EQTFEGHEHFV--------------------MCVAFN------------------PKD-PSTFAS 158 (814)
T ss_dssp EEEEEGGGTSEE---EEEEECCSSCE--------------------EEEEEE------------------TTE-EEEEEE
T ss_pred EEEEECCCCceE---EEEEcCCCCcE--------------------EEEEEE------------------cCC-CCEEEE
Confidence 999999865210 00000000000 000010 101 224667
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
++.|++|++||+++++....+.... .....++ .+.+. .....+++++.||.|++||++. ......
T Consensus 159 ~~~dg~v~vwd~~~~~~~~~~~~~~---------~~~v~~~---~~~~~--~~~~~l~~~~~dg~i~~~d~~~-~~~~~~ 223 (814)
T 3mkq_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQ---------ERGVNYV---DYYPL--PDKPYMITASDDLTIKIWDYQT-KSCVAT 223 (814)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCC---------TTCCCEE---EECCS--TTCCEEEEECTTSEEEEEETTT-TEEEEE
T ss_pred EeCCCeEEEEECCCCcceeEEecCC---------CCCEEEE---EEEEC--CCCCEEEEEeCCCEEEEEECCC-CcEEEE
Confidence 7788999999998877655554221 0111111 23331 1223689999999999999976 456777
Q ss_pred eecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCC--EEEEEeCCCeEEEE
Q 017296 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK--IAATAGWDRRVRIY 325 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~--~l~s~~~dg~v~iw 325 (374)
+.+|..+|.++.++|++..+++++.||.|++||+.... . ...+..+...+.+++|+|+++ ++++ +.|+.+.+|
T Consensus 224 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~--~--~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~ 298 (814)
T 3mkq_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK--V--EKTLNVGLERSWCIATHPTGRKNYIAS-GFDNGFTVL 298 (814)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCS--E--EEEECCSSSSEEEEEECTTCGGGEEEE-EETTEEEEE
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc--E--EEEeecCCCcEEEEEEccCCCceEEEE-EeCCCEEEE
Confidence 88999999999999999999999999999999987543 2 233455667899999999987 3554 457778889
Q ss_pred EccCCe----------EEE---------------------------------EecccCCceEEEEEeCCCCEEEEEeCCC
Q 017296 326 NYRKGS----------ALA---------------------------------ILKYHHATCNAVSFSSDCKLMASASEDS 362 (374)
Q Consensus 326 d~~~~~----------~~~---------------------------------~~~~h~~~v~~v~~sp~~~~las~s~D~ 362 (374)
++.... .+. .+..|...+.+++|+|+|++|++++ |+
T Consensus 299 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~ 377 (814)
T 3mkq_A 299 SLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DG 377 (814)
T ss_dssp ECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TT
T ss_pred EcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CC
Confidence 875422 111 1123445678899999999999888 89
Q ss_pred cEEEecCC
Q 017296 363 TVALWELY 370 (374)
Q Consensus 363 ~v~~W~~~ 370 (374)
.+.+|++.
T Consensus 378 ~~~i~~~~ 385 (814)
T 3mkq_A 378 EYVIYTAL 385 (814)
T ss_dssp EEEEEETT
T ss_pred EEEEEECc
Confidence 99999864
No 86
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=3.7e-28 Score=226.89 Aligned_cols=266 Identities=19% Similarity=0.236 Sum_probs=174.0
Q ss_pred EeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEe
Q 017296 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (374)
Q Consensus 13 ~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd 92 (374)
.+.+|...|++|+|+|+|++|++|+.|++|+|||+.+++.+..+.+|.. .+.++++ ++..+++|+.|+++++||
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~--~v~~~s~----~~~~l~sgs~d~~i~~~d 215 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSA--RVGSLSW----NSYILSSGSRSGHIHHHD 215 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEE----ETTEEEEEETTSEEEEEE
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCC--ceEEEee----CCCEEEEEeCCCceeEee
Confidence 3457889999999999999999999999999999999998888877753 3555555 347899999999999999
Q ss_pred cCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCC
Q 017296 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 172 (374)
...... .+.....|...+. .. .+ .+... +++++..|+
T Consensus 216 ~~~~~~------~~~~~~~h~~~~~-------------------~~----------------~~-~~~g~-~l~s~~~D~ 252 (420)
T 4gga_A 216 VRVAEH------HVATLSGHSQEVC-------------------GL----------------RW-APDGR-HLASGGNDN 252 (420)
T ss_dssp TTSSSC------EEEEEECCSSCEE-------------------EE----------------EE-CTTSS-EEEEEETTS
T ss_pred ecccce------eeEEeccccccee-------------------ee----------------ee-cCCCC-eeeeeeccc
Confidence 876421 1111000000000 00 00 01112 456777889
Q ss_pred eEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEE--EEecCCcEEEEeccCCCCceeeeec
Q 017296 173 EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVL--AGYEDGSILVWDIRNPGIPLTAMKV 250 (374)
Q Consensus 173 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gs~dg~i~iwdl~~~~~~~~~~~~ 250 (374)
.+++||+.+++......... ...... +.+ ..+.+.. ...++ +|+.|++|++||+++ +.....+.
T Consensus 253 ~v~i~~~~~~~~~~~~~~~~------~~~~~~--V~~-~~~~p~~---~~~la~~~gs~D~~I~iwd~~t-~~~~~~~~- 318 (420)
T 4gga_A 253 LVNVWPSAPGEGGWVPLQTF------TQHQGA--VKA-VAWCPWQ---SNVLATGGGTSDRHIRIWNVCS-GACLSAVD- 318 (420)
T ss_dssp CEEEEESSCCSSCSCCSEEE------CCCSSC--EEE-EEECTTC---TTEEEEEECTTTCEEEEEETTT-TEEEEEEE-
T ss_pred cceEEeeccccccceeeeee------cccCCc--eee-eeeCCCc---ccEEEEEeecCCCEEEEEeCCc-cccceeec-
Confidence 99999998875321110000 000111 111 1233322 12333 467899999999986 34444444
Q ss_pred CccCeEEEEEecCCCceEEEe--cCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEcc
Q 017296 251 HLEPVLCLSIDESCNGGISGG--ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 328 (374)
Q Consensus 251 h~~~v~~~~~~~~~~~~~s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~ 328 (374)
+...+.++.+.+++..+++++ .|+.|++||+.... . ...+..|...|.+++|+||+++|+||+.|++|+|||+.
T Consensus 319 ~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~--~--v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 319 AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--K--VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--E--EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCc--E--EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 456788999998888887765 79999999996543 2 34566788899999999999999999999999999998
Q ss_pred CCeEEEEecccCCceEE
Q 017296 329 KGSALAILKYHHATCNA 345 (374)
Q Consensus 329 ~~~~~~~~~~h~~~v~~ 345 (374)
+..+......+...+..
T Consensus 395 ~~~~~~~~~~~~~~~~~ 411 (420)
T 4gga_A 395 ELDPARRREREKASAAK 411 (420)
T ss_dssp CSSCC------------
T ss_pred CCCccchhhhccCCccc
Confidence 77666555555544433
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-29 Score=236.36 Aligned_cols=304 Identities=14% Similarity=0.180 Sum_probs=195.5
Q ss_pred CCCCCCeEEeecCCCceeEEEE----------eCCCCEEEEecCCCcEEEEeCcccceeeee-eeeeceeeeEEeccCCc
Q 017296 5 PPPPDPVAVLRGHRASVTDVCF----------HQTKPILFAGTTGGELRIWDTVQHRTVSSS-WVHSAAHGIVSVATGPS 73 (374)
Q Consensus 5 ~~~~~~~~~l~gH~~~V~~l~~----------~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 73 (374)
++|-+...++..|..-+..+.+ ++++..+++++ .|+ .+++.+..+ .+|. ..|.++++++.
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~~~~p~~~~~~~f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~--~~V~~~~~s~~ 74 (437)
T 3gre_A 4 HHHHHGEGDVESIEKFLSTFKILPPLRDYKEFGPIQEIVRSPN------MGN-LRGKLIATLMENEP--NSITSSAVSPG 74 (437)
T ss_dssp ----------CCCGGGTTCC-CCCCGGGCGGGCCCCCCCCCCC------GGG-CCCCEEEEECTTTT--SCEEEEEEECS
T ss_pred cccccCCCChhHHHHHhccCCCCCChhchhhcCCccccccccc------ccc-ccceEEeeeccCCC--CceEEEEECCC
Confidence 3444555566666666655554 45566666554 498 456777776 5554 35888888762
Q ss_pred cccceeeeccccCeEEEEecCC---CCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCC
Q 017296 74 IGLNKVISQGRDGTVKCWDIEN---GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC 150 (374)
Q Consensus 74 ~~~~~l~s~~~D~~vrvwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (374)
++++|++|+.|++|++||+.+ +.... ...... +..... +..
T Consensus 75 -~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~-h~~~v~--------------------~~~------------- 118 (437)
T 3gre_A 75 -ETPYLITGSDQGVIKIWNLKEIIVGEVYS-SSLTYD-CSSTVT--------------------QIT------------- 118 (437)
T ss_dssp -SSCEEEEEETTSEEEEEEHHHHHTTCCCS-CSEEEE-CSSCEE--------------------EEE-------------
T ss_pred -CCCEEEEecCCceEEEeECcccccCcccc-eeeecc-CCCCEE--------------------EEE-------------
Confidence 457999999999999999976 32110 011000 000000 000
Q ss_pred CCCCCCCCCCCceEEEcccCCCeEEEEecC---CCceeEEeccCccCCCCCcC---CCCCcceeEEEeeecCCCCCceEE
Q 017296 151 DSKDDVPAEGPKYMAVAGEQLSEVEIWDLN---TAERCTRLHQNSCGGSPNFS---SKGRGMCMAVQAYLPSKSQGFVNV 224 (374)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 224 (374)
+.+ +.. ++++++.|++|++||++ +++.......+. .....+. ......++. +.. ......+
T Consensus 119 -----~~~-~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~---~~~--~~~~~~l 185 (437)
T 3gre_A 119 -----MIP-NFD-AFAVSSKDGQIIVLKVNHYQQESEVKFLNCEC-IRKINLKNFGKNEYAVRMR---AFV--NEEKSLL 185 (437)
T ss_dssp -----ECT-TSS-EEEEEETTSEEEEEEEEEEEETTEEEEEEEEE-EEEEEGGGGSSCCCEEEEE---EEE--CSSCEEE
T ss_pred -----EeC-CCC-EEEEEeCCCEEEEEEeccccCCceeeccccce-eEEEEccCcccccCceEEE---EEE--cCCCCEE
Confidence 111 122 45677789999999995 555443332110 0000111 111112211 111 1223468
Q ss_pred EEEecCCcEEEEeccCCCCceeeeec--CccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeee-cCCCCe
Q 017296 225 LAGYEDGSILVWDIRNPGIPLTAMKV--HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN-LERPGI 301 (374)
Q Consensus 225 ~~gs~dg~i~iwdl~~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~-~~~~~v 301 (374)
++|+.||.|++||++. ...+..+.+ |..+|.+++|++++..+++|+.|++|++||++.. ... ..+. .+...|
T Consensus 186 ~~~~~d~~i~iwd~~~-~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~--~~~--~~~~~~~~~~v 260 (437)
T 3gre_A 186 VALTNLSRVIIFDIRT-LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN--VLI--RSWSFGDHAPI 260 (437)
T ss_dssp EEEETTSEEEEEETTT-CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT--EEE--EEEBCTTCEEE
T ss_pred EEEeCCCeEEEEeCCC-CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc--cEE--EEEecCCCCce
Confidence 9999999999999986 456777777 8899999999999999999999999999999753 332 2222 344578
Q ss_pred EEEEE----CCCCCEEEEEeCCCeEEEEEccCCeEEEEecc--------------------------cCCceEEEEEeCC
Q 017296 302 SGTSI----RPDSKIAATAGWDRRVRIYNYRKGSALAILKY--------------------------HHATCNAVSFSSD 351 (374)
Q Consensus 302 ~~~~~----sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------------------------h~~~v~~v~~sp~ 351 (374)
.++++ +|++++|++++.||+|++||+.+++.+..+.+ |...|.+++|+ +
T Consensus 261 ~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~ 339 (437)
T 3gre_A 261 THVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-N 339 (437)
T ss_dssp EEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-T
T ss_pred EEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-C
Confidence 99955 46788999999999999999999998877764 44568888998 7
Q ss_pred CCEEEEEeCCCcEEEecCCCC
Q 017296 352 CKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 352 ~~~las~s~D~~v~~W~~~~~ 372 (374)
+++|++++.|+.|++||+..+
T Consensus 340 ~~~l~s~~~d~~i~~wd~~~~ 360 (437)
T 3gre_A 340 DKILLTDEATSSIVMFSLNEL 360 (437)
T ss_dssp TEEEEEEGGGTEEEEEETTCG
T ss_pred ceEEEecCCCCeEEEEECCCc
Confidence 799999999999999998754
No 88
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=4.2e-28 Score=240.75 Aligned_cols=255 Identities=19% Similarity=0.271 Sum_probs=177.5
Q ss_pred CeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEE
Q 017296 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vr 89 (374)
+...+.+|...|++++|+|++++|+||+.|++|+|||+.+++.+..+.+|.. .+.++++++ ++++++|++.|++||
T Consensus 422 ~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~--~v~~~~~s~--~~~~l~s~s~D~~i~ 497 (694)
T 3dm0_A 422 AQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK--DVLSVAFSL--DNRQIVSASRDRTIK 497 (694)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS--CEEEEEECT--TSSCEEEEETTSCEE
T ss_pred ccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCC--CEEEEEEeC--CCCEEEEEeCCCEEE
Confidence 4678999999999999999999999999999999999999988888877764 488888887 568999999999999
Q ss_pred EEecCCCCCCCCCceeeee-cceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 90 CWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 90 vwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
+||...... ..+.. ...|.. ...+.. +.+.+...+++++
T Consensus 498 iwd~~~~~~-----~~~~~~~~~h~~-----------------~v~~~~------------------~~~~~~~~~l~s~ 537 (694)
T 3dm0_A 498 LWNTLGECK-----YTISEGGEGHRD-----------------WVSCVR------------------FSPNTLQPTIVSA 537 (694)
T ss_dssp EECTTSCEE-----EEECSSTTSCSS-----------------CEEEEE------------------ECSCSSSCEEEEE
T ss_pred EEECCCCcc-----eeeccCCCCCCC-----------------cEEEEE------------------EeCCCCcceEEEE
Confidence 999854310 00000 000000 000000 1112222356788
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~ 248 (374)
+.|++|++||+++++....+..+. ....++ .+.++ ...+++|+.||+|++||+++. ..+..+
T Consensus 538 s~d~~v~vwd~~~~~~~~~~~~h~----------~~v~~v---~~spd----g~~l~sg~~Dg~i~iwd~~~~-~~~~~~ 599 (694)
T 3dm0_A 538 SWDKTVKVWNLSNCKLRSTLAGHT----------GYVSTV---AVSPD----GSLCASGGKDGVVLLWDLAEG-KKLYSL 599 (694)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCS----------SCEEEE---EECTT----SSEEEEEETTSBCEEEETTTT-EEEECC
T ss_pred eCCCeEEEEECCCCcEEEEEcCCC----------CCEEEE---EEeCC----CCEEEEEeCCCeEEEEECCCC-ceEEEe
Confidence 889999999999988776665321 111121 24332 236899999999999999863 444444
Q ss_pred ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee---------------ecCCCCeEEEEECCCCCEE
Q 017296 249 KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI---------------NLERPGISGTSIRPDSKIA 313 (374)
Q Consensus 249 ~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~---------------~~~~~~v~~~~~sp~~~~l 313 (374)
. +...+.+++|+|++.. ++++.|+.|++||++.......+.... ..+...+.+++|+|++++|
T Consensus 600 ~-~~~~v~~~~~sp~~~~-l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l 677 (694)
T 3dm0_A 600 E-ANSVIHALCFSPNRYW-LCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTL 677 (694)
T ss_dssp B-CSSCEEEEEECSSSSE-EEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEE
T ss_pred c-CCCcEEEEEEcCCCcE-EEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEE
Confidence 3 4568999999998765 455567789999997542211111000 0111237889999999999
Q ss_pred EEEeCCCeEEEEEcc
Q 017296 314 ATAGWDRRVRIYNYR 328 (374)
Q Consensus 314 ~s~~~dg~v~iwd~~ 328 (374)
++|+.||+|++||+.
T Consensus 678 ~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 678 FSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEETTSEEEEEEC-
T ss_pred EEEcCCCeEEEEecc
Confidence 999999999999985
No 89
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=6.1e-29 Score=230.22 Aligned_cols=268 Identities=13% Similarity=0.054 Sum_probs=158.9
Q ss_pred ecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCccccee-----eeeeeeeceeeeEEeccCC------ccccceeeecc
Q 017296 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTV-----SSSWVHSAAHGIVSVATGP------SIGLNKVISQG 83 (374)
Q Consensus 15 ~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~-----~~~~~~~~~~~~~~~~~~~------~~~~~~l~s~~ 83 (374)
..|...+...++++++.+|++|+.|++|++||..+++.. ..+.+|.. .|.+++|++ ..+++.|+|+|
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~--~v~~v~~~p~~~~~~~~d~~~las~s 163 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHN--FVNDIDIADVYSADNRLAEQVIASVG 163 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSS--CEEEEEEEEEECTTCSEEEEEEEEEE
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCC--ceEEEEEccccccccCCCCCEEEEEE
Confidence 345555555556667788999999999999999877542 23456653 477888865 23568999999
Q ss_pred ccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCce
Q 017296 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (374)
Q Consensus 84 ~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (374)
.|++||+||+.++.. ............ +.. +.+. ...
T Consensus 164 ~D~tv~~Wd~~~~~~----~~~~~~~~~~v~--------------------~v~------------------~~p~-~~~ 200 (393)
T 4gq1_A 164 DDCTLIIWRLTDEGP----ILAGYPLSSPGI--------------------SVQ------------------FRPS-NPN 200 (393)
T ss_dssp TTSEEEEEEEETTEE----EEEEEECSSCEE--------------------EEE------------------EETT-EEE
T ss_pred CCCeEEEEECCCCce----eeeecCCCCCcE--------------------EEE------------------ECCC-CCc
Confidence 999999999976521 001000000000 000 1111 133
Q ss_pred EEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC
Q 017296 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (374)
Q Consensus 164 ~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~ 243 (374)
++++++.|++|++||+++++......+... ..... .++..... ..
T Consensus 201 ~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~--------~~~~~-----------------~~s~~~~~----------~~ 245 (393)
T 4gq1_A 201 QLIVGERNGNIRIFDWTLNLSAEENSQTEL--------VKNPW-----------------LLTLNTLP----------LV 245 (393)
T ss_dssp EEEEEETTSEEEEEETTCCC------------------CSCCC-----------------SEEEESGG----------GC
T ss_pred eEEecCCCCEEEEEECCCCcccccccccCC--------cccce-----------------EEeccccc----------ce
Confidence 567888899999999998875444332110 00000 01110000 01
Q ss_pred ceeeeecCccCeEEEEEe-cCCCceEEEecCCeEEEEEcCCCCCeEEEEE---------------eeecCCCCeEEEEEC
Q 017296 244 PLTAMKVHLEPVLCLSID-ESCNGGISGGADQKIVLYNLDHSTGSCVIKK---------------EINLERPGISGTSIR 307 (374)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~-~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~---------------~~~~~~~~v~~~~~s 307 (374)
......+|...+.++.+. +++..+++++.|+++++||+........+.. ..... .......|+
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 324 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLF-PSLLGACPH 324 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSS-CCSSCCEEC
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccccc-CcceeEEEc
Confidence 112235688899999986 7888999999999999999864321111100 00011 112223344
Q ss_pred C--CCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCc
Q 017296 308 P--DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST 363 (374)
Q Consensus 308 p--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~ 363 (374)
| ++.++++|+.||+|++||+.+++....+.+|...|.+++|+|||++||+++.||.
T Consensus 325 ~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp SSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred cCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 3 4556788889999999999999888888889999999999999999999998875
No 90
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=5.2e-28 Score=219.89 Aligned_cols=266 Identities=18% Similarity=0.253 Sum_probs=179.1
Q ss_pred eecCCCceeEEEEeCC---CCEEEEecCCCcEEEEeCcccc-eeeeeeeeeceeeeEEeccC----Cccccceeeecccc
Q 017296 14 LRGHRASVTDVCFHQT---KPILFAGTTGGELRIWDTVQHR-TVSSSWVHSAAHGIVSVATG----PSIGLNKVISQGRD 85 (374)
Q Consensus 14 l~gH~~~V~~l~~~~~---~~~l~s~s~D~~v~vWd~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~s~~~D 85 (374)
..+|..+|++++|+|+ +.+|++|+.|+.|++||+.+++ .+..+..|.. .+.++.+. .+++++.|++++.|
T Consensus 61 ~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~s~~~~~l~~~~~d 138 (357)
T 3i2n_A 61 EIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKE--IINAIDGIGGLGIGEGAPEIVTGSRD 138 (357)
T ss_dssp EEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSS--CEEEEEEESGGGCC-CCCEEEEEETT
T ss_pred eecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEeccc--ceEEEeeccccccCCCccEEEEEeCC
Confidence 3489999999999998 6999999999999999999887 6777766653 36666332 12367899999999
Q ss_pred CeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEE
Q 017296 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (374)
Q Consensus 86 ~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (374)
++|++||+.+++.. ...+.....+. ...+...... ..+. ++.. ++
T Consensus 139 ~~i~vwd~~~~~~~---~~~~~~~~~~~------------------~~~v~~~~~~------------~~~~-~~~~-~l 183 (357)
T 3i2n_A 139 GTVKVWDPRQKDDP---VANMEPVQGEN------------------KRDCWTVAFG------------NAYN-QEER-VV 183 (357)
T ss_dssp SCEEEECTTSCSSC---SEEECCCTTSC------------------CCCEEEEEEE------------CCCC--CCC-EE
T ss_pred CeEEEEeCCCCCCc---ceeccccCCCC------------------CCceEEEEEE------------eccC-CCCC-EE
Confidence 99999999876411 11111000000 0000000000 0011 1222 45
Q ss_pred EcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCce
Q 017296 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (374)
Q Consensus 166 ~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~ 245 (374)
++++.|+.|++||+++++........ ....+ ..+.+... ....+++|+.||.|++||++... +.
T Consensus 184 ~~~~~d~~i~i~d~~~~~~~~~~~~~-----------~~v~~---~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~-~~ 247 (357)
T 3i2n_A 184 CAGYDNGDIKLFDLRNMALRWETNIK-----------NGVCS---LEFDRKDI-SMNKLVATSLEGKFHVFDMRTQH-PT 247 (357)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECS-----------SCEEE---EEESCSSS-SCCEEEEEESTTEEEEEEEEEEE-TT
T ss_pred EEEccCCeEEEEECccCceeeecCCC-----------CceEE---EEcCCCCC-CCCEEEEECCCCeEEEEeCcCCC-cc
Confidence 66777899999999998764433211 11111 12333100 22368899999999999997532 22
Q ss_pred e-----eeecCccCeEEEEEecCCC-ceEEEecCCeEEEEEcCCCCCe---------------EEEEEeeecCCCCeEEE
Q 017296 246 T-----AMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGS---------------CVIKKEINLERPGISGT 304 (374)
Q Consensus 246 ~-----~~~~h~~~v~~~~~~~~~~-~~~s~s~D~~i~lwd~~~~~~~---------------~~~~~~~~~~~~~v~~~ 304 (374)
. .+.+|..+|.++.|+|++. .+++++.||.|++||++..... ......+..|...|.++
T Consensus 248 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~ 327 (357)
T 3i2n_A 248 KGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSL 327 (357)
T ss_dssp TEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEE
T ss_pred cceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEE
Confidence 2 2348999999999999887 7899999999999999754322 12344566777889999
Q ss_pred EECCCCCEEE-EEeCCCeEEEEEccCCeE
Q 017296 305 SIRPDSKIAA-TAGWDRRVRIYNYRKGSA 332 (374)
Q Consensus 305 ~~sp~~~~l~-s~~~dg~v~iwd~~~~~~ 332 (374)
+|+|++++|+ +++.||+|++||+.+.+.
T Consensus 328 ~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 328 DWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred EEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 9999999998 899999999999987653
No 91
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=2e-28 Score=227.22 Aligned_cols=254 Identities=16% Similarity=0.254 Sum_probs=185.5
Q ss_pred CCeEEeecCCCceeEEEEeC-CCCEEEEecCCCcEEEEeCccc-------ceeeeeeeeeceeeeEEeccCCccccceee
Q 017296 9 DPVAVLRGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQH-------RTVSSSWVHSAAHGIVSVATGPSIGLNKVI 80 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~-~~~~l~s~s~D~~v~vWd~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 80 (374)
+++..+.+|.++|++++|+| ++.+|++|+.|++|+|||+.++ +++..+.+|. ..+.++++++. +.+.++
T Consensus 72 ~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~p~-~~~~l~ 148 (402)
T 2aq5_A 72 KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHT--KRVGIVAWHPT-AQNVLL 148 (402)
T ss_dssp TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCS--SCEEEEEECSS-BTTEEE
T ss_pred CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCC--CeEEEEEECcC-CCCEEE
Confidence 46667899999999999999 8999999999999999999887 4566666665 45888888873 126899
Q ss_pred eccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCC
Q 017296 81 SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEG 160 (374)
Q Consensus 81 s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (374)
+++.|++|++||+.+++.. .. +..
T Consensus 149 s~~~dg~i~iwd~~~~~~~-------~~---------~~~---------------------------------------- 172 (402)
T 2aq5_A 149 SAGCDNVILVWDVGTGAAV-------LT---------LGP---------------------------------------- 172 (402)
T ss_dssp EEETTSCEEEEETTTTEEE-------EE---------ECT----------------------------------------
T ss_pred EEcCCCEEEEEECCCCCcc-------EE---------Eec----------------------------------------
Confidence 9999999999999865210 00 000
Q ss_pred CceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccC
Q 017296 161 PKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (374)
Q Consensus 161 ~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~ 240 (374)
.+ ..+.| .+ ..+.++ ...+++++.||.|++||+++
T Consensus 173 ------~~-~~~~v-------------------------------~~---~~~~~~----~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 173 ------DV-HPDTI-------------------------------YS---VDWSRD----GALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp ------TT-CCSCE-------------------------------EE---EEECTT----SSCEEEEETTSEEEEEETTT
T ss_pred ------CC-CCCce-------------------------------EE---EEECCC----CCEEEEEecCCcEEEEeCCC
Confidence 00 00000 00 012111 12488899999999999986
Q ss_pred CCCceeee-ecCccC-eEEEEEecCCCceEEE---ecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEE-
Q 017296 241 PGIPLTAM-KVHLEP-VLCLSIDESCNGGISG---GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA- 314 (374)
Q Consensus 241 ~~~~~~~~-~~h~~~-v~~~~~~~~~~~~~s~---s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~- 314 (374)
...+..+ ..|... +.++.|++++..+++| +.|+.|++||++........ ... .+...+.+++|+|++++++
T Consensus 208 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~-~~~-~~~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 208 -GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSL-QEL-DTSSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp -TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEE-EEC-CCCSSCEEEEEETTTTEEEE
T ss_pred -CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceE-Eec-cCCCceeEEEEcCCCCEEEE
Confidence 3445556 678765 8999999998888888 79999999999754321111 111 2445799999999999986
Q ss_pred EEeCCCeEEEEEccCCeE-EEEecc--cCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 315 TAGWDRRVRIYNYRKGSA-LAILKY--HHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 315 s~~~dg~v~iwd~~~~~~-~~~~~~--h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
+++.||+|++||+.+++. +..+.. |...|.+++|+|++.++++ .|+.+++|++..
T Consensus 285 ~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~ 342 (402)
T 2aq5_A 285 CGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLHE 342 (402)
T ss_dssp EETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEET
T ss_pred EEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcCC
Confidence 455799999999998773 444444 4589999999999998875 577999999854
No 92
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=2.7e-27 Score=211.80 Aligned_cols=258 Identities=19% Similarity=0.239 Sum_probs=174.6
Q ss_pred CCeEEe--ecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccC
Q 017296 9 DPVAVL--RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDG 86 (374)
Q Consensus 9 ~~~~~l--~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~ 86 (374)
+++.++ ++|...|++|+|+|++++|+||+.|++|++||..+++.+..+.+|... +.++.. ++..+++++.++
T Consensus 56 ~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~--~~~~~~----~~~~l~s~~~~~ 129 (318)
T 4ggc_A 56 DILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR--VGSLSW----NSYILSSGSRSG 129 (318)
T ss_dssp CEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC--EEEEEE----ETTEEEEEETTS
T ss_pred CEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccce--EEEeec----CCCEEEEEecCC
Confidence 444544 578899999999999999999999999999999999988888777532 444433 346899999999
Q ss_pred eEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEE
Q 017296 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (374)
Q Consensus 87 ~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (374)
.+++|+...+.. .+.....|..... . . .+ ..... +++
T Consensus 130 ~~~~~~~~~~~~------~~~~~~~~~~~~~-----------------~--------~----------~~-~~~~~-~l~ 166 (318)
T 4ggc_A 130 HIHHHDVRVAEH------HVATLSGHSQEVC-----------------G--------L----------RW-APDGR-HLA 166 (318)
T ss_dssp EEEEEETTSSSC------EEEEEECCSSCEE-----------------E--------E----------EE-CTTSS-EEE
T ss_pred ceEeeecCCCce------eEEEEcCccCceE-----------------E--------E----------EE-cCCCC-EEE
Confidence 999999876521 1111000000000 0 0 00 01112 456
Q ss_pred cccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee
Q 017296 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (374)
Q Consensus 167 ~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~ 246 (374)
+++.|++|++||+++++......... .... ..... ..+.+.. .....+++++.+++|++||.+... ..
T Consensus 167 s~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~--~~v~~-~~~~~~~-~~~~~~~~~~~~~~i~lwd~~~~~--~~ 234 (318)
T 4ggc_A 167 SGGNDNLVNVWPSAPGEGGWVPLQTF------TQHQ--GAVKA-VAWCPWQ-SNVLATGGGTSDRHIRIWNVCSGA--CL 234 (318)
T ss_dssp EEETTSCEEEEESSCBTTBSCCSEEE------CCCC--SCEEE-EEECTTS-TTEEEEEECTTTCEEEEEETTTCC--EE
T ss_pred EEecCcceeEEECCCCcccccceeee------cccC--CceEE-EEecCCC-CcEEEEEecCCCCEEEEEeccccc--cc
Confidence 77889999999999876322111100 0000 11111 1222222 122234568889999999997533 33
Q ss_pred eeecCccCeEEEEEecCCCceEEEe--cCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q 017296 247 AMKVHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 324 (374)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~~~~s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~i 324 (374)
....+...+..+.+.+.+..+++++ .|++|++||++... . ...+..|...|++++|+|++++||||+.||+|+|
T Consensus 235 ~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~--~--~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~i 310 (318)
T 4ggc_A 235 SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMA--K--VAELKGHTSRVLSLTMSPDGATVASAAADETLRL 310 (318)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCC--E--EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEE
T ss_pred ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCc--E--EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEE
Confidence 3455788899999998888777654 79999999997543 2 2456678889999999999999999999999999
Q ss_pred EEccCCe
Q 017296 325 YNYRKGS 331 (374)
Q Consensus 325 wd~~~~~ 331 (374)
||+.+..
T Consensus 311 Wd~~~~d 317 (318)
T 4ggc_A 311 WRCFELD 317 (318)
T ss_dssp ECCSCCC
T ss_pred EECCCCC
Confidence 9997643
No 93
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=5e-28 Score=223.63 Aligned_cols=272 Identities=15% Similarity=0.216 Sum_probs=187.9
Q ss_pred CCeEEeecCCCceeEEEEeCC----C---CEEEEecCCCcEEEEeCcccce-----eeeeeeeec---eeeeEEeccCCc
Q 017296 9 DPVAVLRGHRASVTDVCFHQT----K---PILFAGTTGGELRIWDTVQHRT-----VSSSWVHSA---AHGIVSVATGPS 73 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~----~---~~l~s~s~D~~v~vWd~~~~~~-----~~~~~~~~~---~~~~~~~~~~~~ 73 (374)
+++..+.+|..+|++++|+++ + .+|++++.|+.|++||+.+++. +..+..|.. ...+.++++++.
T Consensus 53 ~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 132 (397)
T 1sq9_A 53 DKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGAS 132 (397)
T ss_dssp GGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECC
T ss_pred CcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeec
Confidence 478899999999999999999 9 9999999999999999988876 666666621 145788888721
Q ss_pred --cccce-eeeccccCeEEEEecCC------CCCCC-CCceeeeecceeeeeeeeeccccccccccCCCCcccccccCce
Q 017296 74 --IGLNK-VISQGRDGTVKCWDIEN------GGLSS-NPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGET 143 (374)
Q Consensus 74 --~~~~~-l~s~~~D~~vrvwd~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (374)
++++. +++++.|+.|++||+.+ ++... .+...+.. . ..... .......+.
T Consensus 133 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~-------~~~~~i~~~------- 192 (397)
T 1sq9_A 133 NDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQG---T---VESPM-------TPSQFATSV------- 192 (397)
T ss_dssp C----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEE---E---ECCSS-------SSCCCCCEE-------
T ss_pred cCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeee---e---ecccc-------CCCCCceEE-------
Confidence 25678 99999999999999987 43211 00000000 0 00000 000000000
Q ss_pred eecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcC-CCCCcceeEEEeeecCCCCCce
Q 017296 144 VDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFS-SKGRGMCMAVQAYLPSKSQGFV 222 (374)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 222 (374)
.+.+. . ++++++.|+.|++||+++++.+..+.... .+. ......+ ..+.++ ..
T Consensus 193 -----------~~~~~-~--~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~h~~~~~~i~~---i~~~~~----~~ 246 (397)
T 1sq9_A 193 -----------DISER-G--LIATGFNNGTVQISELSTLRPLYNFESQH-----SMINNSNSIRS---VKFSPQ----GS 246 (397)
T ss_dssp -----------EECTT-S--EEEEECTTSEEEEEETTTTEEEEEEECCC--------CCCCCEEE---EEECSS----TT
T ss_pred -----------EECCC-c--eEEEEeCCCcEEEEECCCCceeEEEeccc-----cccccCCccce---EEECCC----CC
Confidence 11122 2 56778889999999999988776665300 000 0111111 123332 23
Q ss_pred EEEEEecC---CcEEEEeccCCCCceeeeec-------------CccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCC
Q 017296 223 NVLAGYED---GSILVWDIRNPGIPLTAMKV-------------HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTG 286 (374)
Q Consensus 223 ~~~~gs~d---g~i~iwdl~~~~~~~~~~~~-------------h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~ 286 (374)
.+++++.| |.|++||+++ ...+..+.. |..+|.++.|++++..+++++.|+.|++||++...
T Consensus 247 ~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~- 324 (397)
T 1sq9_A 247 LLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE- 324 (397)
T ss_dssp EEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE-
T ss_pred EEEEEecCCCCceEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc-
Confidence 68899999 9999999986 456777877 99999999999999999999999999999997542
Q ss_pred eEEEEEeee------cC---------------CCCeEEEEECCCC----------CEEEEEeCCCeEEEEEccCCe
Q 017296 287 SCVIKKEIN------LE---------------RPGISGTSIRPDS----------KIAATAGWDRRVRIYNYRKGS 331 (374)
Q Consensus 287 ~~~~~~~~~------~~---------------~~~v~~~~~sp~~----------~~l~s~~~dg~v~iwd~~~~~ 331 (374)
.. ..+. .| ...|.+++|+|++ ++|++++.||.|++||+.+++
T Consensus 325 -~~--~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 325 -RI--TTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp -EE--EEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred -ee--EEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 22 2333 44 6789999999998 799999999999999998764
No 94
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=1.4e-27 Score=212.54 Aligned_cols=229 Identities=17% Similarity=0.228 Sum_probs=158.9
Q ss_pred CCeEEeecCCCceeEEEEeCC--CCEEEEecCCCcEEEEeCcccc--eeeeeeeeeceeeeEEeccCCccccceeeeccc
Q 017296 9 DPVAVLRGHRASVTDVCFHQT--KPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR 84 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~--~~~l~s~s~D~~v~vWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~ 84 (374)
+++.+|.||.++|++|+|+++ +++|+|||.|++|++||+.+++ .+..+..|. ..+.+++|++...+..|++++.
T Consensus 44 ~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~--~~v~~v~~~p~~~g~~l~s~s~ 121 (297)
T 2pm7_B 44 KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHS--ASVNSVQWAPHEYGPMLLVASS 121 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCS--SCEEEEEECCGGGCSEEEEEET
T ss_pred EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCC--CceeEEEeCcCCCCcEEEEEEC
Confidence 578899999999999999863 8999999999999999998774 344444554 4588899988544678999999
Q ss_pred cCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceE
Q 017296 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (374)
Q Consensus 85 D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (374)
|++|++||++++.... ...+..+.. ...
T Consensus 122 d~~v~~wd~~~~~~~~--~~~~~~h~~--------------------------------------------------~v~ 149 (297)
T 2pm7_B 122 DGKVSVVEFKENGTTS--PIIIDAHAI--------------------------------------------------GVN 149 (297)
T ss_dssp TSEEEEEEBCSSSCBC--CEEEECCSS--------------------------------------------------CEE
T ss_pred CCcEEEEEecCCCcee--eeeeecccC--------------------------------------------------ccc
Confidence 9999999997652110 000000000 000
Q ss_pred EEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC-
Q 017296 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI- 243 (374)
Q Consensus 165 ~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~- 243 (374)
.+ -|....... .. .. . .......+++|+.|++|++||++....
T Consensus 150 ~~---------~~~p~~~~~---~~--------------~~-------~---~~~~~~~l~sgs~D~~v~lwd~~~~~~~ 193 (297)
T 2pm7_B 150 SA---------SWAPATIEE---DG--------------EH-------N---GTKESRKFVTGGADNLVKIWKYNSDAQT 193 (297)
T ss_dssp EE---------EECCCC---------------------------------------CCEEEEEETTSCEEEEEEETTTTE
T ss_pred eE---------eecCCcccc---cc--------------cC-------C---CCCCcceEEEEcCCCcEEEEEEcCCCce
Confidence 00 010000000 00 00 0 000112588999999999999976432
Q ss_pred --ceeeeecCccCeEEEEEecCC---CceEEEecCCeEEEEEcCCCCCeEEEEEee--ecCCCCeEEEEECCCCCEEEEE
Q 017296 244 --PLTAMKVHLEPVLCLSIDESC---NGGISGGADQKIVLYNLDHSTGSCVIKKEI--NLERPGISGTSIRPDSKIAATA 316 (374)
Q Consensus 244 --~~~~~~~h~~~v~~~~~~~~~---~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~s~ 316 (374)
....+.+|..+|.+++|+|++ ..++++|.|++|++||++........ ..+ ..+...+.+++|+|++++||++
T Consensus 194 ~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~-~~~~~~~~~~~v~~~~~s~~g~~las~ 272 (297)
T 2pm7_B 194 YVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKK-TLLKEEKFPDVLWRASWSLSGNVLALS 272 (297)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEE-EESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred EEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccce-eeeecccCCCcEEEEEECCCCCEEEEE
Confidence 345678999999999999974 67899999999999999764332211 111 3345679999999999999999
Q ss_pred eCCCeEEEEEcc
Q 017296 317 GWDRRVRIYNYR 328 (374)
Q Consensus 317 ~~dg~v~iwd~~ 328 (374)
+.||+|++|+..
T Consensus 273 ~~D~~v~lw~~~ 284 (297)
T 2pm7_B 273 GGDNKVTLWKEN 284 (297)
T ss_dssp ETTSCEEEEEEC
T ss_pred cCCCcEEEEEEC
Confidence 999999999986
No 95
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.9e-28 Score=228.85 Aligned_cols=272 Identities=11% Similarity=0.095 Sum_probs=185.2
Q ss_pred ecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecC
Q 017296 15 RGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (374)
Q Consensus 15 ~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~ 94 (374)
+.-...|.+|+|+|||++++|+|.|++|+ |...++++ .+|.. .+..++|+| ++ .|+++++|+.+
T Consensus 12 ~~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~--~v~~V~FsP--dg-------~~~~~~~~~~~ 75 (588)
T 2j04_A 12 KEFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSK--NLFHVKEFP--LE-------FENKLDFELAQ 75 (588)
T ss_dssp CCCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGG--GTEEEEEEC--CC-------CCCTTTTSCCC
T ss_pred hHhhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCc--cEEEEEECC--CC-------CcceEEEEeCC
Confidence 35578999999999999999999999999 76555544 45653 477888887 33 45555555543
Q ss_pred CCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeE
Q 017296 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEV 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 174 (374)
.+...... .......+ .+.+ +++. +++++.|++|
T Consensus 76 ~~~~~~~~----~~~~V~~v----------------------------------------awSP-dG~~-LAs~s~dg~V 109 (588)
T 2j04_A 76 QNGLLNSQ----PVCYPRVC----------------------------------------KPSP-IDDW-MAVLSNNGNV 109 (588)
T ss_dssp SSCSSTTS----CSCCEEEE----------------------------------------EECS-SSSC-EEEEETTSCE
T ss_pred CceEeecC----CCCcEEEE----------------------------------------EECC-CCCE-EEEEeCCCcE
Confidence 22111000 00000000 0112 2233 4566678999
Q ss_pred EEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC------ceeee
Q 017296 175 EIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI------PLTAM 248 (374)
Q Consensus 175 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~------~~~~~ 248 (374)
++||..+ ++..+. +... .. .+. .....|.|+ ...+++|+.||+|++||+..... .+.++
T Consensus 110 ~iwd~~~--~l~~l~-~~~~-----~~-~~s--v~svafSPD----G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti 174 (588)
T 2j04_A 110 SVFKDNK--MLTNLD-SKGN-----LS-SRT--YHCFEWNPI----ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSI 174 (588)
T ss_dssp EEEETTE--EEEECC-CSSC-----ST-TTC--EEEEEECSS----SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEE
T ss_pred EEEeCCc--eeeecc-CCCc-----cc-ccc--EEEEEEcCC----CCEEEEEcCCCEEEEEECCCCccccccceeeeee
Confidence 9999544 333332 2100 00 001 111245553 23699999999999999976431 24555
Q ss_pred ----ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee-ecCCCCeEEEEECCCCCEEEEEeCCCeEE
Q 017296 249 ----KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI-NLERPGISGTSIRPDSKIAATAGWDRRVR 323 (374)
Q Consensus 249 ----~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~s~~~dg~v~ 323 (374)
.+|...|.+++|+|++ +++++.|++|++||++....... ...+ ..|+..|.+++|+ +++||+++ +++|+
T Consensus 175 ~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~-~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIk 248 (588)
T 2j04_A 175 RLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPV-SRMIQNASRRKITDLKIV--DYKVVLTC-PGYVH 248 (588)
T ss_dssp ECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCC-EEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEE
T ss_pred ecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccc-eeeecccccCcEEEEEEE--CCEEEEEe-CCeEE
Confidence 6788899999999998 89999999999999976442100 1123 2566789999999 58899887 79999
Q ss_pred EEEccCCeEEEEecccCCceEEEEE--eCCCCEEEEEeCCCcEEEecCC
Q 017296 324 IYNYRKGSALAILKYHHATCNAVSF--SSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 324 iwd~~~~~~~~~~~~h~~~v~~v~~--sp~~~~las~s~D~~v~~W~~~ 370 (374)
+||+.+++......+|.+.|..++| +||+..|+++++||+ |+|.+.
T Consensus 249 LWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 249 KIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 9999887764444489999999999 999999999999999 999873
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.1e-26 Score=215.42 Aligned_cols=259 Identities=17% Similarity=0.213 Sum_probs=181.2
Q ss_pred CCeEEeec-CCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 9 DPVAVLRG-HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 9 ~~~~~l~g-H~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
+....+.. |...|++++|+|++++|++|+.|+.|++||+.+++.+..+..|.. .+.++.+. ++.+++++.|++
T Consensus 124 ~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~----~~~l~~~~~dg~ 197 (401)
T 4aez_A 124 SVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQA--RVGCLSWN----RHVLSSGSRSGA 197 (401)
T ss_dssp CEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEEE----TTEEEEEETTSE
T ss_pred cEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCC--ceEEEEEC----CCEEEEEcCCCC
Confidence 44455554 899999999999999999999999999999999988888776653 46777763 478999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|++||++.... .......+......+ . +.+ +.. ++++
T Consensus 198 i~i~d~~~~~~---~~~~~~~~~~~v~~~--------------------~------------------~~~-~~~-~l~s 234 (401)
T 4aez_A 198 IHHHDVRIANH---QIGTLQGHSSEVCGL--------------------A------------------WRS-DGL-QLAS 234 (401)
T ss_dssp EEEEETTSSSC---EEEEEECCSSCEEEE--------------------E------------------ECT-TSS-EEEE
T ss_pred EEEEecccCcc---eeeEEcCCCCCeeEE--------------------E------------------EcC-CCC-EEEE
Confidence 99999985321 000110000000000 0 111 122 4566
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEe--cCCcEEEEeccCCCCce
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY--EDGSILVWDIRNPGIPL 245 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs--~dg~i~iwdl~~~~~~~ 245 (374)
++.|+.|++||+++++....+..+. ....++ .+.++ +...+++|+ .|+.|++||+++ ...+
T Consensus 235 ~~~d~~v~iwd~~~~~~~~~~~~~~----------~~v~~~---~~~p~---~~~ll~~~~gs~d~~i~i~d~~~-~~~~ 297 (401)
T 4aez_A 235 GGNDNVVQIWDARSSIPKFTKTNHN----------AAVKAV---AWCPW---QSNLLATGGGTMDKQIHFWNAAT-GARV 297 (401)
T ss_dssp EETTSCEEEEETTCSSEEEEECCCS----------SCCCEE---EECTT---STTEEEEECCTTTCEEEEEETTT-CCEE
T ss_pred EeCCCeEEEccCCCCCccEEecCCc----------ceEEEE---EECCC---CCCEEEEecCCCCCEEEEEECCC-CCEE
Confidence 7788999999999988776664321 111111 23332 223466655 799999999986 3445
Q ss_pred eeeecCccCeEEEEEecCCCceEEE--ecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEE
Q 017296 246 TAMKVHLEPVLCLSIDESCNGGISG--GADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVR 323 (374)
Q Consensus 246 ~~~~~h~~~v~~~~~~~~~~~~~s~--s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~ 323 (374)
..+. +...+.++.|++++..++++ +.|+.|++||+... .......+..|...+.+++|+|++++|++++.||+|+
T Consensus 298 ~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~--~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~ 374 (401)
T 4aez_A 298 NTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS--GLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLK 374 (401)
T ss_dssp EEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT--EEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEE
T ss_pred EEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc--cceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEE
Confidence 5554 67889999999999988884 48999999999753 3333344567778899999999999999999999999
Q ss_pred EEEccCCeEEEEe
Q 017296 324 IYNYRKGSALAIL 336 (374)
Q Consensus 324 iwd~~~~~~~~~~ 336 (374)
+||+.+++.+...
T Consensus 375 iw~~~~~~~~~~~ 387 (401)
T 4aez_A 375 FWRVYDGDHVKRP 387 (401)
T ss_dssp EEECCC-------
T ss_pred EEECCCCcccccc
Confidence 9999988876544
No 97
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=3.8e-28 Score=221.38 Aligned_cols=259 Identities=14% Similarity=0.161 Sum_probs=177.5
Q ss_pred CCCceeEEEEeCC----CCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEe
Q 017296 17 HRASVTDVCFHQT----KPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (374)
Q Consensus 17 H~~~V~~l~~~~~----~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd 92 (374)
|...|++++|+|+ +.+|++|+.|+.|++||+.+++.+..+..|. ..+.++.+++. +++.+++++.|++|++||
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~--~~i~~~~~~~~-~~~~l~s~~~dg~i~iwd 144 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHG--NAINELKFHPR-DPNLLLSVSKDHALRLWN 144 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCC--SCEEEEEECSS-CTTEEEEEETTSCEEEEE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCC--CcEEEEEECCC-CCCEEEEEeCCCeEEEEE
Confidence 5688999999998 6799999999999999999998888877665 45888888763 457899999999999999
Q ss_pred cCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCC
Q 017296 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 172 (374)
+++++.. ..+.....|.. ...+.. +.+ +.. ++++++.|+
T Consensus 145 ~~~~~~~----~~~~~~~~~~~-----------------~v~~~~------------------~~~-~~~-~l~~~~~dg 183 (366)
T 3k26_A 145 IQTDTLV----AIFGGVEGHRD-----------------EVLSAD------------------YDL-LGE-KIMSCGMDH 183 (366)
T ss_dssp TTTTEEE----EEECSTTSCSS-----------------CEEEEE------------------ECT-TSS-EEEEEETTS
T ss_pred eecCeEE----EEecccccccC-----------------ceeEEE------------------ECC-CCC-EEEEecCCC
Confidence 9876321 00000000000 000000 111 223 355667789
Q ss_pred eEEEEecCCCceeEEeccCccC----CC----------C----CcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEE
Q 017296 173 EVEIWDLNTAERCTRLHQNSCG----GS----------P----NFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 234 (374)
Q Consensus 173 ~i~vWd~~~~~~~~~~~~~~~~----~~----------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~ 234 (374)
.|++||+++++....+...... .. + .........++. +. + ..+++++.||.|+
T Consensus 184 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~~-----~-~~l~~~~~d~~i~ 254 (366)
T 3k26_A 184 SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVR---WL-----G-DLILSKSCENAIV 254 (366)
T ss_dssp CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEE---EE-----T-TEEEEECSSSEEE
T ss_pred CEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEE---Ec-----C-CEEEEEecCCEEE
Confidence 9999999987654332210000 00 0 000111112221 22 1 2689999999999
Q ss_pred EEeccCCCC-------------ceeeeecCccCeEEEEEecC--CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecC--
Q 017296 235 VWDIRNPGI-------------PLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE-- 297 (374)
Q Consensus 235 iwdl~~~~~-------------~~~~~~~h~~~v~~~~~~~~--~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~-- 297 (374)
+||++.... .+..+..|..+|.+++|+++ +..+++++.||.|++||++...........+..|
T Consensus 255 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 334 (366)
T 3k26_A 255 CWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKC 334 (366)
T ss_dssp EEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTC
T ss_pred EEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEccccc
Confidence 999976432 25567789999999999988 8999999999999999997654322222334444
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEEcc
Q 017296 298 RPGISGTSIRPDSKIAATAGWDRRVRIYNYR 328 (374)
Q Consensus 298 ~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~ 328 (374)
...|.+++|+|++++|++++.||+|++||+.
T Consensus 335 ~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 335 GAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 5789999999999999999999999999985
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.6e-27 Score=217.62 Aligned_cols=253 Identities=13% Similarity=0.114 Sum_probs=162.3
Q ss_pred EEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeecccc
Q 017296 44 IWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPY 123 (374)
Q Consensus 44 vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (374)
+|++.+.+++.....|. ..+.+++|++ +++.|++|+.|+ +++||+..++.. .....+ .
T Consensus 3 i~s~~~~~~~~~~~~h~--~~V~~v~fs~--dg~~la~g~~~~-~~iw~~~~~~~~-------~~~~~~---------~- 60 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVS--NPVTDYEFNQ--DQSCLILSTLKS-FEIYNVHPVAHI-------MSQEMR---------H- 60 (355)
T ss_dssp ----------------C--CCCCEEEECT--TSSEEEEECSSE-EEEEEETTEEEE-------EEEECS---------C-
T ss_pred cccccccCCccccccCC--CceEEEEECC--CCCEEEEEcCCE-EEEEecCCccee-------eeeecC---------C-
Confidence 45666666665555564 4588899987 677888887764 799998754210 000000 0
Q ss_pred ccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCC
Q 017296 124 ANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKG 203 (374)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (374)
. ..+. + .....+++++++.|++|++||+++++.+..+... .
T Consensus 61 ---------~--------~~~~----------~-~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~-----------~ 101 (355)
T 3vu4_A 61 ---------L--------SKVR----------M-LHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVD-----------A 101 (355)
T ss_dssp ---------C--------CEEE----------E-CTTSSEEEEECSSTTEEEEEETTTTEEEEEEECS-----------S
T ss_pred ---------e--------EEEE----------E-cCCCCEEEEEECCccEEEEEECCCCcEEEEEECC-----------C
Confidence 0 0000 0 1123456677777899999999999887766421 1
Q ss_pred CcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEE--EecCCeEEEEEc
Q 017296 204 RGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGIS--GGADQKIVLYNL 281 (374)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s--~s~D~~i~lwd~ 281 (374)
... ++ .+.+ . .++++ .|+.|++||+......+..+.. +...+++.+ ..++. |+.||.|++||+
T Consensus 102 ~v~--~v-~~~~----~--~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~ 166 (355)
T 3vu4_A 102 PVK--DL-FLSR----E--FIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKL 166 (355)
T ss_dssp CEE--EE-EECS----S--EEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEEC
T ss_pred ceE--EE-EEcC----C--EEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEEC
Confidence 111 11 1221 1 23333 4889999999864233444433 444455555 34444 688999999999
Q ss_pred CCCCCe----E-------EE-EEeeecCCCCeEEEEECCCCCEEEEEeCCCe-EEEEEccCCeEEEEec-c-cCCceEEE
Q 017296 282 DHSTGS----C-------VI-KKEINLERPGISGTSIRPDSKIAATAGWDRR-VRIYNYRKGSALAILK-Y-HHATCNAV 346 (374)
Q Consensus 282 ~~~~~~----~-------~~-~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-v~iwd~~~~~~~~~~~-~-h~~~v~~v 346 (374)
+..... . .. ...+..|...|.+++|+|++++||+|+.|++ |++||+.+++.+.++. + |...|.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~ 246 (355)
T 3vu4_A 167 QSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDM 246 (355)
T ss_dssp CC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEE
T ss_pred CCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEE
Confidence 753200 0 00 2345678889999999999999999999999 9999999999999998 5 99999999
Q ss_pred EEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 347 SFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 347 ~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
+|+|+|++|++++.|++|++|++..+
T Consensus 247 ~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 247 KWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EECCCCCEEEEEECCCEEEEEEccCC
Confidence 99999999999999999999999654
No 99
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.3e-26 Score=216.77 Aligned_cols=288 Identities=10% Similarity=0.040 Sum_probs=200.3
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeee-----eeeeceeeeEEeccCCccccceeeecc
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS-----WVHSAAHGIVSVATGPSIGLNKVISQG 83 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~s~~ 83 (374)
+.+..+..|. .+.+++|+|++.++++++.|++|++||+.+++.+... ..|. ..+.++++++ +++.+++++
T Consensus 114 ~~~~~~~~~~-~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~--~~v~~~~~~~--~~~~~~s~~ 188 (433)
T 3bws_A 114 RFISRFKTGF-QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKL--GFVETISIPE--HNELWVSQM 188 (433)
T ss_dssp EEEEEEECSS-CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTC--CEEEEEEEGG--GTEEEEEEG
T ss_pred eEEEEEcCCC-CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccC--CceeEEEEcC--CCEEEEEEC
Confidence 3445555554 4569999998888999999999999999988766522 2232 2466777755 667899999
Q ss_pred ccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCce
Q 017296 84 RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKY 163 (374)
Q Consensus 84 ~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (374)
.|++|++||+++++.. ..+........ +.. + .++...
T Consensus 189 ~d~~v~~~d~~~~~~~----~~~~~~~~~~~--------------------~~~------------------~-~~~~~~ 225 (433)
T 3bws_A 189 QANAVHVFDLKTLAYK----ATVDLTGKWSK--------------------ILL------------------Y-DPIRDL 225 (433)
T ss_dssp GGTEEEEEETTTCCEE----EEEECSSSSEE--------------------EEE------------------E-ETTTTE
T ss_pred CCCEEEEEECCCceEE----EEEcCCCCCee--------------------EEE------------------E-cCCCCE
Confidence 9999999999876421 01100000000 000 1 122345
Q ss_pred EEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEe--------cCCcEEE
Q 017296 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY--------EDGSILV 235 (374)
Q Consensus 164 ~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs--------~dg~i~i 235 (374)
+++++..++.|++||+++++.+..+.... . ... ..+.++ +. .+++++ .||.|++
T Consensus 226 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-----------~--~~~-~~~~~~---g~-~l~~~~~~~~~~~~~dg~i~~ 287 (433)
T 3bws_A 226 VYCSNWISEDISVIDRKTKLEIRKTDKIG-----------L--PRG-LLLSKD---GK-ELYIAQFSASNQESGGGRLGI 287 (433)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECCCCS-----------E--EEE-EEECTT---SS-EEEEEEEESCTTCSCCEEEEE
T ss_pred EEEEecCCCcEEEEECCCCcEEEEecCCC-----------C--ceE-EEEcCC---CC-EEEEEECCCCccccCCCeEEE
Confidence 66677778999999999988765553210 1 111 123222 22 466655 5889999
Q ss_pred EeccCCCCceeeeecCccCeEEEEEecCCCce-EEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEE
Q 017296 236 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA 314 (374)
Q Consensus 236 wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 314 (374)
||++.. .... ...|...+.+++|++++..+ ++++.|+.|++||++.. ... ..+. +...+.+++|+|++++++
T Consensus 288 ~d~~~~-~~~~-~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~--~~~--~~~~-~~~~~~~~~~s~dg~~l~ 360 (433)
T 3bws_A 288 YSMDKE-KLID-TIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK--KVQ--KSIP-VFDKPNTIALSPDGKYLY 360 (433)
T ss_dssp EETTTT-EEEE-EEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT--EEE--EEEE-CSSSEEEEEECTTSSEEE
T ss_pred EECCCC-cEEe-eccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC--cEE--EEec-CCCCCCeEEEcCCCCEEE
Confidence 999753 3333 33566789999999988654 66789999999999743 322 2222 345689999999999988
Q ss_pred EEeC---------------CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeC-CCcEEEecCC
Q 017296 315 TAGW---------------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE-DSTVALWELY 370 (374)
Q Consensus 315 s~~~---------------dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~-D~~v~~W~~~ 370 (374)
+++. ||.|++||+.+++.+..+.. ...+.+++|+|+|++|++++. |++|++|++.
T Consensus 361 ~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 361 VSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 8876 57999999999998888875 457999999999999988775 9999999985
No 100
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=2.5e-27 Score=222.31 Aligned_cols=266 Identities=17% Similarity=0.304 Sum_probs=178.5
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
.+++.++.+|.++|++++| ++++|++|+.||+|++||+.+++.+..+..|. ..+.++.+++ +.+++|+.|++
T Consensus 163 ~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~--~~v~~l~~~~----~~l~s~s~dg~ 234 (435)
T 1p22_A 163 LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHC--EAVLHLRFNN----GMMVTCSKDRS 234 (435)
T ss_dssp CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCC--SCEEEEECCT----TEEEEEETTSC
T ss_pred CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCC--CcEEEEEEcC----CEEEEeeCCCc
Confidence 4677889999999999999 78899999999999999999999888877765 3477777754 58999999999
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|++||+.++.... .......|... ..... . ++. ++++
T Consensus 235 i~vwd~~~~~~~~----~~~~~~~~~~~-------------------v~~~~------------------~-~~~-~l~s 271 (435)
T 1p22_A 235 IAVWDMASPTDIT----LRRVLVGHRAA-------------------VNVVD------------------F-DDK-YIVS 271 (435)
T ss_dssp EEEEECSSSSCCE----EEEEECCCSSC-------------------EEEEE------------------E-ETT-EEEE
T ss_pred EEEEeCCCCCCce----eeeEecCCCCc-------------------EEEEE------------------e-CCC-EEEE
Confidence 9999998764210 00000000000 00000 0 112 4567
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
++.|++|++||+++++.+..+..+. ....++ .+. ...+++|+.||.|++||+++ ...+..
T Consensus 272 ~~~dg~i~vwd~~~~~~~~~~~~~~----------~~v~~~---~~~------~~~l~~g~~dg~i~iwd~~~-~~~~~~ 331 (435)
T 1p22_A 272 ASGDRTIKVWNTSTCEFVRTLNGHK----------RGIACL---QYR------DRLVVSGSSDNTIRLWDIEC-GACLRV 331 (435)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCS----------SCEEEE---EEE------TTEEEEEETTSCEEEEETTT-CCEEEE
T ss_pred EeCCCeEEEEECCcCcEEEEEcCCC----------CcEEEE---EeC------CCEEEEEeCCCeEEEEECCC-CCEEEE
Confidence 7789999999999998877775321 111222 121 12689999999999999986 456778
Q ss_pred eecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCe-----EEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeE
Q 017296 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGS-----CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 322 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~-----~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v 322 (374)
+.+|..+|.++.++ +..+++|+.||.|++||+...... ......+..|...|.+++| ++++|++++.||+|
T Consensus 332 ~~~h~~~v~~~~~~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i 407 (435)
T 1p22_A 332 LEGHEELVRCIRFD--NKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTI 407 (435)
T ss_dssp ECCCSSCEEEEECC--SSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEE
T ss_pred EeCCcCcEEEEEec--CCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEE
Confidence 89999999999995 457899999999999998542210 0022345567778999999 77889999999999
Q ss_pred EEEEccCCeEEEEecccCCceEEEEEe
Q 017296 323 RIYNYRKGSALAILKYHHATCNAVSFS 349 (374)
Q Consensus 323 ~iwd~~~~~~~~~~~~h~~~v~~v~~s 349 (374)
++||+.+........ ......++.|.
T Consensus 408 ~iwd~~~~~~~~~~~-~~~~~~~~~~~ 433 (435)
T 1p22_A 408 LIWDFLNDPAAQAEP-PRSPSRTYTYI 433 (435)
T ss_dssp EEEC-----------------------
T ss_pred EEEECCCCCCcccCC-CCCCccceeee
Confidence 999998765443322 22344445554
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.9e-26 Score=216.00 Aligned_cols=259 Identities=11% Similarity=0.050 Sum_probs=184.5
Q ss_pred EEeecCCCceeEEEEeCCCCEE-EEecCCCcEEEEeCc--ccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 12 AVLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 12 ~~l~gH~~~V~~l~~~~~~~~l-~s~s~D~~v~vWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
....+|.+.|++++|+|++++| ++|+.|++|+|||+. +++.+..+..|.....+.+++|++ +++.|++++.|+.+
T Consensus 96 ~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 96 LGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE--DDTTVIIADKFGDV 173 (450)
T ss_dssp ----CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT--TSSEEEEEETTSEE
T ss_pred CCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC--CCCEEEEEeCCCcE
Confidence 3455788899999999999996 899999999999998 787777766554445688888987 66899999999999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++|++.++.....+...+ .+
T Consensus 174 ~~~~~~~~~~~~~~~~~~------------------------------------------------------------~~ 193 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPI------------------------------------------------------------LG 193 (450)
T ss_dssp EEEETTSCCCSSCCCCCS------------------------------------------------------------EE
T ss_pred EEEecCCcccccccceee------------------------------------------------------------ec
Confidence 999997653210000000 00
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee-
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA- 247 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~- 247 (374)
- .+.| .++ .+.++. .+...+++|+.|+.|++||++... .+..
T Consensus 194 h-~~~v-------------------------------~~~---~~sp~~-~~~~~l~s~~~d~~i~vwd~~~~~-~~~~~ 236 (450)
T 2vdu_B 194 H-VSML-------------------------------TDV---HLIKDS-DGHQFIITSDRDEHIKISHYPQCF-IVDKW 236 (450)
T ss_dssp C-SSCE-------------------------------EEE---EEEECT-TSCEEEEEEETTSCEEEEEESCTT-CEEEE
T ss_pred c-cCce-------------------------------EEE---EEcCCC-CCCcEEEEEcCCCcEEEEECCCCc-eeeee
Confidence 0 0000 000 122210 012358899999999999998643 3444
Q ss_pred eecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee---------------------ecCCCCeEEEEE
Q 017296 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI---------------------NLERPGISGTSI 306 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~---------------------~~~~~~v~~~~~ 306 (374)
+.+|..+|.+++|+ ++..+++++.|++|++||++.......+...- ......+.+++|
T Consensus 237 ~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~ 315 (450)
T 2vdu_B 237 LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIK 315 (450)
T ss_dssp CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEE
T ss_pred ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEE
Confidence 66899999999999 99999999999999999997543222221000 012346889999
Q ss_pred CCCCCEEEEEe-CCCeEEEEEc--cCC---eEEEEecccCCceEEEEEeCCCCEEEEEeC------CCcEEEecCCC
Q 017296 307 RPDSKIAATAG-WDRRVRIYNY--RKG---SALAILKYHHATCNAVSFSSDCKLMASASE------DSTVALWELYP 371 (374)
Q Consensus 307 sp~~~~l~s~~-~dg~v~iwd~--~~~---~~~~~~~~h~~~v~~v~~sp~~~~las~s~------D~~v~~W~~~~ 371 (374)
+|++++|++++ .|+.|++|++ .++ +.+..+..| ..|.+++|+|++.+++.++. +..|++|.+..
T Consensus 316 ~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 316 SKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp CSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred eCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 99999999999 8999999999 555 667778888 88999999996544544443 56689998743
No 102
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=1.5e-27 Score=214.37 Aligned_cols=233 Identities=18% Similarity=0.165 Sum_probs=157.0
Q ss_pred CeEEeecCCCceeEEEEeC--CCCEEEEecCCCcEEEEeCcccc--eeeeeeeeeceeeeEEeccCCccccceeeecccc
Q 017296 10 PVAVLRGHRASVTDVCFHQ--TKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD 85 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~--~~~~l~s~s~D~~v~vWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D 85 (374)
++..|+||.++|++|+|++ ++++|+|||.|++|++||+.+++ .+..+.+|. ..+.+++|++..++..|++|+.|
T Consensus 49 ~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~--~~V~~v~~~p~~~g~~lasgs~D 126 (316)
T 3bg1_A 49 LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHD--SSVNSVCWAPHDYGLILACGSSD 126 (316)
T ss_dssp EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCS--SCCCEEEECCTTTCSCEEEECSS
T ss_pred EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCC--CceEEEEECCCCCCcEEEEEcCC
Confidence 4678999999999999975 48999999999999999998764 444555564 34788888885446789999999
Q ss_pred CeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEE
Q 017296 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (374)
Q Consensus 86 ~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (374)
++|++||+..+... ........|. ....+..+ .+...
T Consensus 127 ~~i~lwd~~~~~~~----~~~~~~~~h~-----------------~~v~~~~~------------------~~~~~---- 163 (316)
T 3bg1_A 127 GAISLLTYTGEGQW----EVKKINNAHT-----------------IGCNAVSW------------------APAVV---- 163 (316)
T ss_dssp SCEEEEEECSSSCE----EECCBTTSSS-----------------SCBCCCEE------------------CCCCC----
T ss_pred CCEEEEecCCCCCc----ceeeeecccc-----------------CCcceEEE------------------ccccC----
Confidence 99999999764210 0000000000 00000000 00000
Q ss_pred EcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC--C
Q 017296 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG--I 243 (374)
Q Consensus 166 ~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~--~ 243 (374)
.+ .+ .+...+ . .+.....+++|+.|++|++||++... .
T Consensus 164 -~~----~~--~~~~~~----------------~-----------------~~~~~~~l~sgs~D~~v~lWd~~~~~~~~ 203 (316)
T 3bg1_A 164 -PG----SL--IDHPSG----------------Q-----------------KPNYIKRFASGGCDNLIKLWKEEEDGQWK 203 (316)
T ss_dssp -C------------CCS----------------C-----------------CCCCCCBEECCBTTSBCCEEEECTTSCEE
T ss_pred -Cc----cc--cccccc----------------c-----------------CccccceEEEecCCCeEEEEEeCCCCccc
Confidence 00 00 000000 0 00001248899999999999996432 2
Q ss_pred ceeeeecCccCeEEEEEecCC----CceEEEecCCeEEEEEcCCCC-CeEEEEEeeecCCCCeEEEEECCCCCEEEEEeC
Q 017296 244 PLTAMKVHLEPVLCLSIDESC----NGGISGGADQKIVLYNLDHST-GSCVIKKEINLERPGISGTSIRPDSKIAATAGW 318 (374)
Q Consensus 244 ~~~~~~~h~~~v~~~~~~~~~----~~~~s~s~D~~i~lwd~~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~ 318 (374)
....+.+|..+|.+++|+|++ ..+++++.|++|++|+++... +... ...+..+...+.+++|+|++++||+++.
T Consensus 204 ~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~-~~~~~~~~~~v~~v~~sp~g~~las~~~ 282 (316)
T 3bg1_A 204 EEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWS-PKLLHKFNDVVWHVSWSITANILAVSGG 282 (316)
T ss_dssp EEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCB-CCEEEECSSCEEEEEECTTTCCEEEEES
T ss_pred eeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchh-hhhhhcCCCcEEEEEEcCCCCEEEEEcC
Confidence 466788999999999999875 679999999999999987521 1110 0112345678999999999999999999
Q ss_pred CCeEEEEEcc
Q 017296 319 DRRVRIYNYR 328 (374)
Q Consensus 319 dg~v~iwd~~ 328 (374)
|++|++|+..
T Consensus 283 D~~v~lw~~~ 292 (316)
T 3bg1_A 283 DNKVTLWKES 292 (316)
T ss_dssp SSCEEEEEEC
T ss_pred CCeEEEEEEC
Confidence 9999999975
No 103
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.1e-27 Score=219.87 Aligned_cols=243 Identities=14% Similarity=0.080 Sum_probs=165.3
Q ss_pred eeeEEeccCCccccceeeeccccCeEEEEecCCC--CCCCCCceeeeecceeeeeeeeeccccccccccCCCCccccccc
Q 017296 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENG--GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREV 140 (374)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (374)
..+.++++++ ++++|++++.|++|++||+.++ +... ....|... ..+..
T Consensus 12 ~~v~~~~~s~--~g~~l~~~~~d~~i~iw~~~~~~~~~~~-------~~~~h~~~-----------------v~~~~--- 62 (377)
T 3dwl_C 12 KPSYEHAFNS--QRTEFVTTTATNQVELYEQDGNGWKHAR-------TFSDHDKI-----------------VTCVD--- 62 (377)
T ss_dssp SCCSCCEECS--SSSEEECCCSSSCBCEEEEETTEEEECC-------CBCCCSSC-----------------EEEEE---
T ss_pred CcEEEEEECC--CCCEEEEecCCCEEEEEEccCCceEEEE-------EEecCCce-----------------EEEEE---
Confidence 3577888887 6789999999999999999865 1110 00000000 00000
Q ss_pred CceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCc---eeEEeccCccCCCCCcCCCCCcceeEEEeeecCC
Q 017296 141 GETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE---RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSK 217 (374)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (374)
+.++ .. ++++++.|++|++||+++++ ....+..+ .....+ ..+.++
T Consensus 63 ---------------~s~~-~~-~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~----------~~~v~~---~~~~~~- 111 (377)
T 3dwl_C 63 ---------------WAPK-SN-RIVTCSQDRNAYVYEKRPDGTWKQTLVLLRL----------NRAATF---VRWSPN- 111 (377)
T ss_dssp ---------------ECTT-TC-CEEEEETTSSEEEC------CCCCEEECCCC----------SSCEEE---EECCTT-
T ss_pred ---------------EeCC-CC-EEEEEeCCCeEEEEEcCCCCceeeeeEeccc----------CCceEE---EEECCC-
Confidence 1112 22 35567788999999999876 33333221 111111 123332
Q ss_pred CCCceEEEEEecCCcEEEEeccCCCC--ceeeeec-CccCeEEEEEecCCCceEEEecCCeEEEEEcCCCC---------
Q 017296 218 SQGFVNVLAGYEDGSILVWDIRNPGI--PLTAMKV-HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHST--------- 285 (374)
Q Consensus 218 ~~~~~~~~~gs~dg~i~iwdl~~~~~--~~~~~~~-h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~--------- 285 (374)
...+++|+.|+.|++||++.... ....+.. |...|.+++|+|++..+++++.|++|++||++...
T Consensus 112 ---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 188 (377)
T 3dwl_C 112 ---EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASV 188 (377)
T ss_dssp ---SSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCS
T ss_pred ---CCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccc
Confidence 22588999999999999976432 3556667 99999999999999999999999999999985321
Q ss_pred -----CeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeE----EEEecccCCceEEEEEeCCCCEEE
Q 017296 286 -----GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA----LAILKYHHATCNAVSFSSDCKLMA 356 (374)
Q Consensus 286 -----~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~----~~~~~~h~~~v~~v~~sp~~~~la 356 (374)
........+ .|...+.+++|+|++++|++++.||+|++||+.+++. +..+.+|...|.+++|+|++++|+
T Consensus 189 ~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 267 (377)
T 3dwl_C 189 WGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVA 267 (377)
T ss_dssp SCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEE
T ss_pred cccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEE
Confidence 012222334 6777899999999999999999999999999998877 778889999999999999999999
Q ss_pred EEeCCCcEEEecCC
Q 017296 357 SASEDSTVALWELY 370 (374)
Q Consensus 357 s~s~D~~v~~W~~~ 370 (374)
+++.|+.+ +|+..
T Consensus 268 ~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 268 AGYNYSPI-LLQGN 280 (377)
T ss_dssp EESSSSEE-EECCC
T ss_pred EEcCCcEE-EEEeC
Confidence 99877777 56553
No 104
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=8.6e-27 Score=213.14 Aligned_cols=261 Identities=15% Similarity=0.132 Sum_probs=179.1
Q ss_pred CeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEE
Q 017296 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVK 89 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vr 89 (374)
++..+.+|...|++++|+|++++|++++.|+.|++||+.+++.............+.++++++ +++.+++++.|+.|+
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~~~d~~v~ 121 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAP--NEKKFAVGSGSRVIS 121 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECT--TSSEEEEEETTSSEE
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECC--CCCEEEEEeCCCEEE
Confidence 678899999999999999999999999999999999998876443332222234578888887 568999999999999
Q ss_pred EEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEccc
Q 017296 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE 169 (374)
Q Consensus 90 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (374)
+||+..+... ..... ... +. .....+.. +.+ +.. ++++++
T Consensus 122 i~d~~~~~~~----~~~~~---------~~~-~~------~~~i~~~~------------------~~~-~~~-~l~~~~ 161 (372)
T 1k8k_C 122 ICYFEQENDW----WVCKH---------IKK-PI------RSTVLSLD------------------WHP-NSV-LLAAGS 161 (372)
T ss_dssp EEEEETTTTE----EEEEE---------ECT-TC------CSCEEEEE------------------ECT-TSS-EEEEEE
T ss_pred EEEecCCCcc----eeeee---------eec-cc------CCCeeEEE------------------EcC-CCC-EEEEEc
Confidence 9999875310 00000 000 00 00000000 111 122 456677
Q ss_pred CCCeEEEEecC------------------CCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCC
Q 017296 170 QLSEVEIWDLN------------------TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 231 (374)
Q Consensus 170 ~d~~i~vWd~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg 231 (374)
.|+.|++||++ +++.+..+..+ .....+ ..+.++ ...+++++.||
T Consensus 162 ~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~v~~---~~~~~~----~~~l~~~~~d~ 224 (372)
T 1k8k_C 162 CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS----------CGWVHG---VCFSAN----GSRVAWVSHDS 224 (372)
T ss_dssp TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC----------SSCEEE---EEECSS----SSEEEEEETTT
T ss_pred CCCCEEEEEcccccccccccccccccccchhhheEecCCC----------CCeEEE---EEECCC----CCEEEEEeCCC
Confidence 78999999964 34444443211 111111 123332 23689999999
Q ss_pred cEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEE--------------------
Q 017296 232 SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIK-------------------- 291 (374)
Q Consensus 232 ~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~-------------------- 291 (374)
.|++||+++ ...+..+..|..++.+++|++++..++++ .|+.|++|+++...+.....
T Consensus 225 ~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (372)
T 1k8k_C 225 TVCLADADK-KMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERF 302 (372)
T ss_dssp EEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHH
T ss_pred EEEEEECCC-CceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhh
Confidence 999999986 45677888999999999999988766655 99999999997622221110
Q ss_pred ----------------Eee-ecCCCCeEEEEEC-CCC---CEEEEEeCCCeEEEEEccCCe
Q 017296 292 ----------------KEI-NLERPGISGTSIR-PDS---KIAATAGWDRRVRIYNYRKGS 331 (374)
Q Consensus 292 ----------------~~~-~~~~~~v~~~~~s-p~~---~~l~s~~~dg~v~iwd~~~~~ 331 (374)
..+ ..|...|.+++|+ +++ ++|++++.||+|++||+.+++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~~~ 363 (372)
T 1k8k_C 303 QNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRSLE 363 (372)
T ss_dssp HHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHHHH
T ss_pred hhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecChh
Confidence 112 3677789999865 677 999999999999999997754
No 105
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=5.7e-27 Score=215.82 Aligned_cols=256 Identities=14% Similarity=0.141 Sum_probs=175.8
Q ss_pred cceeeeeeeeeceeeeEEeccCCcccc-ceeeeccccCeEEEEecCCCCCCCCCceeeee--cceeeeeeeeeccccccc
Q 017296 50 HRTVSSSWVHSAAHGIVSVATGPSIGL-NKVISQGRDGTVKCWDIENGGLSSNPSLTIKT--NSYHFCKLSLVKEPYANA 126 (374)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 126 (374)
.+....+.+|. ..+.++++++ ++ +.|++|+.|++|++||+.+++... .... ......
T Consensus 63 ~~~~~~~~~h~--~~v~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~~~~h~~~v~------------ 122 (383)
T 3ei3_B 63 YKLHRTASPFD--RRVTSLEWHP--THPTTVAVGSKGGDIILWDYDVQNKTS----FIQGMGPGDAIT------------ 122 (383)
T ss_dssp CEEEEEECCCS--SCEEEEEECS--SCTTEEEEEEBTSCEEEEETTSTTCEE----EECCCSTTCBEE------------
T ss_pred cceEEeccCCC--CCEEEEEECC--CCCCEEEEEcCCCeEEEEeCCCcccce----eeecCCcCCcee------------
Confidence 33444555554 4588889987 44 789999999999999998764210 0000 000000
Q ss_pred cccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcc
Q 017296 127 KQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGM 206 (374)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (374)
+..+ .+.+ ..++++++.|+.|++||+++ ..+..+.... .......
T Consensus 123 --------~~~~------------------~~~~-~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~-------~~~~~v~ 167 (383)
T 3ei3_B 123 --------GMKF------------------NQFN-TNQLFVSSIRGATTLRDFSG-SVIQVFAKTD-------SWDYWYC 167 (383)
T ss_dssp --------EEEE------------------ETTE-EEEEEEEETTTEEEEEETTS-CEEEEEECCC-------CSSCCEE
T ss_pred --------EEEe------------------CCCC-CCEEEEEeCCCEEEEEECCC-CceEEEeccC-------CCCCCeE
Confidence 0000 0111 23466777899999999986 3344433211 0011111
Q ss_pred eeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCC-ceEEEecCCeEEEEEcCCCC
Q 017296 207 CMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHST 285 (374)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~s~D~~i~lwd~~~~~ 285 (374)
+ ..+.++ ...+++|+.||.|++||++ ..++..+.+|...|.+++|++++. .+++++.|++|++||++...
T Consensus 168 ~---~~~~~~----~~~l~~~~~d~~i~i~d~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 238 (383)
T 3ei3_B 168 C---VDVSVS----RQMLATGDSTGRLLLLGLD--GHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIK 238 (383)
T ss_dssp E---EEEETT----TTEEEEEETTSEEEEEETT--SCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCC
T ss_pred E---EEECCC----CCEEEEECCCCCEEEEECC--CCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCC
Confidence 2 134432 2368999999999999994 456778889999999999999988 78999999999999997532
Q ss_pred CeEEEEEeeecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEEccCCeEEEEecccC-----------------CceEEEE
Q 017296 286 GSCVIKKEINLERPGISGTSIRP-DSKIAATAGWDRRVRIYNYRKGSALAILKYHH-----------------ATCNAVS 347 (374)
Q Consensus 286 ~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-----------------~~v~~v~ 347 (374)
......... .|...+.+++|+| ++++|++++.|++|++||+.+++....+.+|. ..+..++
T Consensus 239 ~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 317 (383)
T 3ei3_B 239 DKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAG 317 (383)
T ss_dssp STTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEE
T ss_pred cccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEE
Confidence 111111222 3667899999999 99999999999999999999887766666553 3444577
Q ss_pred EeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 348 FSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 348 ~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
|+|++++ +++.|++|++||+..+
T Consensus 318 ~s~dg~~--s~s~d~~i~iwd~~~~ 340 (383)
T 3ei3_B 318 RYPDDQL--LLNDKRTIDIYDANSG 340 (383)
T ss_dssp CBCCTTT--CTTCCCCEEEEETTTC
T ss_pred ecCCccc--ccCCCCeEEEEecCCC
Confidence 7777777 8889999999998654
No 106
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=1.3e-26 Score=217.39 Aligned_cols=140 Identities=8% Similarity=0.141 Sum_probs=107.6
Q ss_pred EEEEEecCCcEEEEeccCCCC---ceeeeecCcc------------CeEEEEEecCCCceEEEecCCeEEEEEcCC-CCC
Q 017296 223 NVLAGYEDGSILVWDIRNPGI---PLTAMKVHLE------------PVLCLSIDESCNGGISGGADQKIVLYNLDH-STG 286 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~---~~~~~~~h~~------------~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~-~~~ 286 (374)
.+++|+.||.|++||++.... ....+..|.. +|.+++|++++..+++++. +.|++||++. ...
T Consensus 241 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~ 319 (447)
T 3dw8_B 241 TFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP 319 (447)
T ss_dssp EEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC
T ss_pred EEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc
Confidence 689999999999999986432 1566777776 9999999999999999998 9999999975 222
Q ss_pred eEEEEEeeecCCC---------------CeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEeccc------------
Q 017296 287 SCVIKKEINLERP---------------GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH------------ 339 (374)
Q Consensus 287 ~~~~~~~~~~~~~---------------~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h------------ 339 (374)
.. .+..|.. .+..++|+|++++|++|+.||+|++||+.+++.+ .+.+|
T Consensus 320 ~~----~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~ 394 (447)
T 3dw8_B 320 VE----TYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKP 394 (447)
T ss_dssp SC----CEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCC
T ss_pred cc----eeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCC
Confidence 11 1222221 1234899999999999999999999999988765 33333
Q ss_pred ---------------------CCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 340 ---------------------HATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 340 ---------------------~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
...|.+++|+|++.+||+++.|+ +.+|.-
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 395 RKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEEC
T ss_pred ccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeecc
Confidence 34688999999999999998876 777754
No 107
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=7.1e-26 Score=208.90 Aligned_cols=268 Identities=13% Similarity=0.143 Sum_probs=191.8
Q ss_pred CEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCcccccee-eeccccCeEEEEecCCCCCCCCCceeeeec
Q 017296 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109 (374)
Q Consensus 31 ~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~ 109 (374)
.++++++.|+.|++||+.+++.+..+..|. .+.++++++ +++++ ++++.|++|++||+.+++... .+...
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~--dg~~l~~~~~~d~~i~v~d~~~~~~~~----~~~~~ 73 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS---NPMGAVISP--DGTKVYVANAHSNDVSIIDTATNNVIA----TVPAG 73 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS---SEEEEEECT--TSSEEEEEEGGGTEEEEEETTTTEEEE----EEECS
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC---CcceEEECC--CCCEEEEECCCCCeEEEEECCCCeEEE----EEECC
Confidence 468899999999999999998877766553 367788887 55555 788899999999998764210 00000
Q ss_pred ceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEec
Q 017296 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLH 189 (374)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~ 189 (374)
. ... . + .+ .++++++++++..++.|++||+++++.+..+.
T Consensus 74 ~-~v~--------------------~--------~----------~~-spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~ 113 (391)
T 1l0q_A 74 S-SPQ--------------------G--------V----------AV-SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK 113 (391)
T ss_dssp S-SEE--------------------E--------E----------EE-CTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred C-Ccc--------------------c--------e----------EE-CCCCCEEEEEECCCCEEEEEECCCCeEEEEEe
Confidence 0 000 0 0 01 12335666777788999999999998766654
Q ss_pred cCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCce-E
Q 017296 190 QNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-I 268 (374)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~ 268 (374)
.+. .... ..+.+ .+...+++++.|+.|++||+++ ......+..+ ..+.++.|++++..+ +
T Consensus 114 ~~~-----------~~~~---~~~s~---dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~~~-~~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 114 TGK-----------SPLG---LALSP---DGKKLYVTNNGDKTVSVINTVT-KAVINTVSVG-RSPKGIAVTPDGTKVYV 174 (391)
T ss_dssp CSS-----------SEEE---EEECT---TSSEEEEEETTTTEEEEEETTT-TEEEEEEECC-SSEEEEEECTTSSEEEE
T ss_pred CCC-----------Ccce---EEECC---CCCEEEEEeCCCCEEEEEECCC-CcEEEEEecC-CCcceEEECCCCCEEEE
Confidence 321 1111 12333 2333347888999999999976 3445555544 456899999998877 5
Q ss_pred EEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEe---CCCeEEEEEccCCeEEEEecccCCceEE
Q 017296 269 SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG---WDRRVRIYNYRKGSALAILKYHHATCNA 345 (374)
Q Consensus 269 s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~---~dg~v~iwd~~~~~~~~~~~~h~~~v~~ 345 (374)
+++.|+.|++||++.. ... .... +...+.+++|+|++++|++++ .++.|++||+.+++.+..+..|. .+.+
T Consensus 175 ~~~~~~~v~~~d~~~~--~~~--~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~ 248 (391)
T 1l0q_A 175 ANFDSMSISVIDTVTN--SVI--DTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAG 248 (391)
T ss_dssp EETTTTEEEEEETTTT--EEE--EEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEE
T ss_pred EeCCCCEEEEEECCCC--eEE--EEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccE
Confidence 7788999999999754 222 1222 234688999999999988887 68999999999999888888765 5789
Q ss_pred EEEeCCCCEE-EEEeCCCcEEEecCCCC
Q 017296 346 VSFSSDCKLM-ASASEDSTVALWELYPP 372 (374)
Q Consensus 346 v~~sp~~~~l-as~s~D~~v~~W~~~~~ 372 (374)
++|+|+|++| ++++.|+.|++||+..+
T Consensus 249 ~~~s~dg~~l~~s~~~d~~v~v~d~~~~ 276 (391)
T 1l0q_A 249 IAVTPDGKKVYVALSFXNTVSVIDTATN 276 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTT
T ss_pred EEEccCCCEEEEEcCCCCEEEEEECCCC
Confidence 9999999977 77899999999998643
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=9.6e-26 Score=212.42 Aligned_cols=189 Identities=11% Similarity=0.105 Sum_probs=145.7
Q ss_pred ceEEEcccCCCeEEEEecC--CCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEecc
Q 017296 162 KYMAVAGEQLSEVEIWDLN--TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (374)
Q Consensus 162 ~~~~~~~~~d~~i~vWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~ 239 (374)
++++++++.|+.|++||+. +++.+..+.... ......+ ..+.++ ...+++|+.||.|++||+.
T Consensus 115 ~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~--------~~~~v~~---~~~sp~----~~~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 115 SRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC--------FSKRPNA---ISIAED----DTTVIIADKFGDVYSIDIN 179 (450)
T ss_dssp SEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE--------CSSCEEE---EEECTT----SSEEEEEETTSEEEEEETT
T ss_pred CEEEEEECCCCeEEEEECcCCCCceeeeeeccc--------CCCCceE---EEEcCC----CCEEEEEeCCCcEEEEecC
Confidence 4556777788999999998 777665553210 0011111 124332 2368899999999999997
Q ss_pred CCCC---ceeeeecCccCeEEEEEecC---CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEE
Q 017296 240 NPGI---PLTAMKVHLEPVLCLSIDES---CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 313 (374)
Q Consensus 240 ~~~~---~~~~~~~h~~~v~~~~~~~~---~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 313 (374)
.... +...+.+|..+|.++.|+|+ +..+++++.|++|++||++...... .....|...+.+++|+ ++++|
T Consensus 180 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~---~~~~~h~~~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVD---KWLFGHKHFVSSICCG-KDYLL 255 (450)
T ss_dssp SCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEE---EECCCCSSCEEEEEEC-STTEE
T ss_pred CcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceee---eeecCCCCceEEEEEC-CCCEE
Confidence 6432 23367889999999999999 8899999999999999997543221 1234567789999999 99999
Q ss_pred EEEeCCCeEEEEEccCCeEEEEeccc-------------------------CCceEEEEEeCCCCEEEEEe-CCCcEEEe
Q 017296 314 ATAGWDRRVRIYNYRKGSALAILKYH-------------------------HATCNAVSFSSDCKLMASAS-EDSTVALW 367 (374)
Q Consensus 314 ~s~~~dg~v~iwd~~~~~~~~~~~~h-------------------------~~~v~~v~~sp~~~~las~s-~D~~v~~W 367 (374)
++++.|++|++||+.+++.+..+..+ ...|.+++|+|++++|++++ .|+.|++|
T Consensus 256 ~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp EEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred EEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 99999999999999999988877633 35789999999999999998 99999999
Q ss_pred cC
Q 017296 368 EL 369 (374)
Q Consensus 368 ~~ 369 (374)
++
T Consensus 336 ~~ 337 (450)
T 2vdu_B 336 EM 337 (450)
T ss_dssp EE
T ss_pred Ee
Confidence 98
No 109
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=2.1e-26 Score=215.98 Aligned_cols=250 Identities=13% Similarity=0.129 Sum_probs=168.9
Q ss_pred eeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCc
Q 017296 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (374)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (374)
..|.+++|+|. +.+.|++|+.||+|++||+.++... .......|.. ...+..
T Consensus 120 ~~V~~l~~~P~-~~~~lasGs~dg~i~lWd~~~~~~~-----~~~~~~gH~~-----------------~V~~l~----- 171 (435)
T 4e54_B 120 RRATSLAWHPT-HPSTVAVGSKGGDIMLWNFGIKDKP-----TFIKGIGAGG-----------------SITGLK----- 171 (435)
T ss_dssp SCEEEEEECSS-CTTCEEEEETTSCEEEECSSCCSCC-----EEECCCSSSC-----------------CCCEEE-----
T ss_pred CCEEEEEEeCC-CCCEEEEEeCCCEEEEEECCCCCce-----eEEEccCCCC-----------------CEEEEE-----
Confidence 35899999885 3478999999999999999876321 0000000100 000001
Q ss_pred eeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCce
Q 017296 143 TVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV 222 (374)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (374)
+.+.++. ++++++.|++|++||++++......... .......++ .+.++ ..
T Consensus 172 -------------f~p~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~--------~~~~~~~~~---~~~~~----~~ 222 (435)
T 4e54_B 172 -------------FNPLNTN-QFYASSMEGTTRLQDFKGNILRVFASSD--------TINIWFCSL---DVSAS----SR 222 (435)
T ss_dssp -------------ECSSCTT-EEEEECSSSCEEEEETTSCEEEEEECCS--------SCSCCCCCE---EEETT----TT
T ss_pred -------------EeCCCCC-EEEEEeCCCEEEEeeccCCceeEEeccC--------CCCccEEEE---EECCC----CC
Confidence 1111223 4567888999999999876533222211 011111111 23332 23
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCC-ceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCe
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 301 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v 301 (374)
.+++|+.||.|++||++. ..+..+.+|..+|.+++|+|.+. .+++++.|++|++||++.......+ .....|...|
T Consensus 223 ~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~-~~~~~h~~~v 299 (435)
T 4e54_B 223 MVVTGDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASF-LYSLPHRHPV 299 (435)
T ss_dssp EEEEECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCC-SBCCBCSSCE
T ss_pred EEEEEeCCCcEeeeccCc--ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceE-EEeeeccccc
Confidence 689999999999999963 45667889999999999998876 5678999999999999754332221 1123466789
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCC------ceEEEEEeCCCCEEEEEe------------CCCc
Q 017296 302 SGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA------TCNAVSFSSDCKLMASAS------------EDST 363 (374)
Q Consensus 302 ~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~------~v~~v~~sp~~~~las~s------------~D~~ 363 (374)
.+++|+|++++|++++.||+|++||+.+++....+..|.. .+....|+|++.++++++ .+++
T Consensus 300 ~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 379 (435)
T 4e54_B 300 NAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRT 379 (435)
T ss_dssp EECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCC
T ss_pred cceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCE
Confidence 9999999999999999999999999999887777766653 234456777777666653 3468
Q ss_pred EEEecCCCC
Q 017296 364 VALWELYPP 372 (374)
Q Consensus 364 v~~W~~~~~ 372 (374)
|++|+...+
T Consensus 380 i~iwd~~~g 388 (435)
T 4e54_B 380 IDVFDGNSG 388 (435)
T ss_dssp EEEECSSSC
T ss_pred EEEEECCCC
Confidence 999998543
No 110
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=1.6e-25 Score=203.93 Aligned_cols=252 Identities=16% Similarity=0.203 Sum_probs=175.9
Q ss_pred eEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEE
Q 017296 11 VAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKC 90 (374)
Q Consensus 11 ~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrv 90 (374)
...+.+|...|++++|+|++++|++++.|+.|++||+.+++.+. +..|. ..+.++.+.+.++++.+++++.|++|++
T Consensus 79 ~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~--~~v~~~~~~~~~~~~~l~~~~~dg~i~v 155 (368)
T 3mmy_A 79 PKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHD--APVKTIHWIKAPNYSCVMTGSWDKTLKF 155 (368)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECS--SCEEEEEEEECSSCEEEEEEETTSEEEE
T ss_pred EEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-ecccc--CceEEEEEEeCCCCCEEEEccCCCcEEE
Confidence 37889999999999999999999999999999999998887654 34454 4577888843346788999999999999
Q ss_pred EecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccC
Q 017296 91 WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ 170 (374)
Q Consensus 91 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (374)
||+++++... .+.... ... ... ... . .++++..
T Consensus 156 wd~~~~~~~~----~~~~~~-~~~----------------------~~~------------------~~~-~-~~~~~~~ 188 (368)
T 3mmy_A 156 WDTRSSNPMM----VLQLPE-RCY----------------------CAD------------------VIY-P-MAVVATA 188 (368)
T ss_dssp ECSSCSSCSE----EEECSS-CEE----------------------EEE------------------EET-T-EEEEEEG
T ss_pred EECCCCcEEE----EEecCC-Cce----------------------EEE------------------ecC-C-eeEEEeC
Confidence 9998864321 111000 000 000 000 1 2344555
Q ss_pred CCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC--Cceeee
Q 017296 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG--IPLTAM 248 (374)
Q Consensus 171 d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~--~~~~~~ 248 (374)
++.+++||++............ . .....+.. +..........+++++.||.|++||++... .....+
T Consensus 189 ~~~i~~~~~~~~~~~~~~~~~~------~--~~~~~~~~---~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~ 257 (368)
T 3mmy_A 189 ERGLIVYQLENQPSEFRRIESP------L--KHQHRCVA---IFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTF 257 (368)
T ss_dssp GGCEEEEECSSSCEEEEECCCS------C--SSCEEEEE---EEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEE
T ss_pred CCcEEEEEeccccchhhhcccc------c--cCCCceEE---EcccCCCCCCeEEEecCCCcEEEEecCCCCccccceee
Confidence 7899999998865433322110 0 11112222 222222222348899999999999997642 345566
Q ss_pred ecCcc------------CeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEE
Q 017296 249 KVHLE------------PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA 316 (374)
Q Consensus 249 ~~h~~------------~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~ 316 (374)
.+|.. +|.+++|+|++..+++++.||.|++||++.. .. ...+..|...+.+++|+|++++|+++
T Consensus 258 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~--~~--~~~~~~~~~~v~~~~~s~~g~~l~~~ 333 (368)
T 3mmy_A 258 KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDAR--TK--LKTSEQLDQPISACCFNHNGNIFAYA 333 (368)
T ss_dssp ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTT--EE--EEECCCCSSCEEEEEECTTSSCEEEE
T ss_pred eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCC--cE--EEEecCCCCCceEEEECCCCCeEEEE
Confidence 77766 7999999999999999999999999999743 32 23455677789999999999999999
Q ss_pred eCCCeEEEEEc
Q 017296 317 GWDRRVRIYNY 327 (374)
Q Consensus 317 ~~dg~v~iwd~ 327 (374)
+.|+..+.|++
T Consensus 334 s~d~~~~~~~~ 344 (368)
T 3mmy_A 334 SSYDWSKGHEF 344 (368)
T ss_dssp ECCCSTTCGGG
T ss_pred ecccccccccc
Confidence 99886665554
No 111
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.95 E-value=1.6e-25 Score=205.20 Aligned_cols=250 Identities=14% Similarity=0.060 Sum_probs=161.7
Q ss_pred EEeecCCCceeEEEEeCCCCEEE-----------EecCCCcEEEEeCcccceeeee----e---eeeceeeeEEeccCCc
Q 017296 12 AVLRGHRASVTDVCFHQTKPILF-----------AGTTGGELRIWDTVQHRTVSSS----W---VHSAAHGIVSVATGPS 73 (374)
Q Consensus 12 ~~l~gH~~~V~~l~~~~~~~~l~-----------s~s~D~~v~vWd~~~~~~~~~~----~---~~~~~~~~~~~~~~~~ 73 (374)
..|.+|...|.++++++ +.++ +++.|+++++|++......... . .+.....+.+++|+|
T Consensus 67 ~~l~~~~~~v~s~~~~~--~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp- 143 (365)
T 4h5i_A 67 FALEDNDDSPTAIDASK--GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR- 143 (365)
T ss_dssp EECCTTSCCCCEEEEET--TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-
T ss_pred EEccCCCCceEEEEeCC--CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-
Confidence 45789999999887754 4454 4567888999997654321111 1 111222366788887
Q ss_pred cccceee--eccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCC
Q 017296 74 IGLNKVI--SQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD 151 (374)
Q Consensus 74 ~~~~~l~--s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (374)
|+++++ +++.|++||+||+++++... .+. + ... ....
T Consensus 144 -Dg~~la~as~~~d~~i~iwd~~~~~~~~----~~~----~--------~~~---------V~~v--------------- 182 (365)
T 4h5i_A 144 -EGTVAAIASSKVPAIMRIIDPSDLTEKF----EIE----T--------RGE---------VKDL--------------- 182 (365)
T ss_dssp -TSSCEEEEESCSSCEEEEEETTTTEEEE----EEE----C--------SSC---------CCEE---------------
T ss_pred -CCCEEEEEECCCCCEEEEeECCCCcEEE----EeC----C--------CCc---------eEEE---------------
Confidence 667654 66689999999998763210 000 0 000 0000
Q ss_pred CCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCC
Q 017296 152 SKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG 231 (374)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg 231 (374)
.+.+ ++++++ +++ ++.+++|+..+++.+...... .+ ...+....|.++ + ..+++++.|+
T Consensus 183 ---~fsp-dg~~l~-s~s-~~~~~~~~~~~~~~~~~~~~~------~~-----~~~v~~v~fspd---g-~~l~~~s~d~ 241 (365)
T 4h5i_A 183 ---HFST-DGKVVA-YIT-GSSLEVISTVTGSCIARKTDF------DK-----NWSLSKINFIAD---D-TVLIAASLKK 241 (365)
T ss_dssp ---EECT-TSSEEE-EEC-SSCEEEEETTTCCEEEEECCC------CT-----TEEEEEEEEEET---T-EEEEEEEESS
T ss_pred ---EEcc-CCceEE-ecc-ceeEEEEEeccCcceeeeecC------CC-----CCCEEEEEEcCC---C-CEEEEEecCC
Confidence 1112 234443 444 456788888877755433211 00 111112234443 2 3578888777
Q ss_pred ----cEEEEeccCCCC---ceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEE
Q 017296 232 ----SILVWDIRNPGI---PLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGT 304 (374)
Q Consensus 232 ----~i~iwdl~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~ 304 (374)
.+++||+..... ....+.+|..+|++++|+|++..+++|+.|++|+|||++.. ++. ...+..|...|+++
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~--~~~-~~~~~gH~~~V~~v 318 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDL--SMS-KIFKQAHSFAITEV 318 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTT--EEE-EEETTSSSSCEEEE
T ss_pred cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCC--cEE-EEecCcccCCEEEE
Confidence 688899865322 13456789999999999999999999999999999999643 332 22246788899999
Q ss_pred EECCCCCEEEEEeCCCeEEEEEccC
Q 017296 305 SIRPDSKIAATAGWDRRVRIYNYRK 329 (374)
Q Consensus 305 ~~sp~~~~l~s~~~dg~v~iwd~~~ 329 (374)
+||||+++||||+.|++|||||+..
T Consensus 319 ~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 319 TISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EECTTSCEEEEEETTSEEEEEECCT
T ss_pred EECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999999999999999999954
No 112
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=3.2e-25 Score=204.94 Aligned_cols=294 Identities=13% Similarity=0.104 Sum_probs=165.7
Q ss_pred ecCCCceeEEEEeC-CCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCc-cccceeeeccccCeEEEEe
Q 017296 15 RGHRASVTDVCFHQ-TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPS-IGLNKVISQGRDGTVKCWD 92 (374)
Q Consensus 15 ~gH~~~V~~l~~~~-~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~s~~~D~~vrvwd 92 (374)
.+|...|++++|+| ++.+|++++.|+.|++||+.+++.+..+. +. ..+.++.+.+. .++..+++++.|+.|++||
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d 172 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FE--ETVYSHHMSPVSTKHCLVAVGTRGPKVQLCD 172 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CS--SCEEEEEECSSCSSCCEEEEEESSSSEEEEE
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CC--CceeeeEeecCCCCCcEEEEEcCCCeEEEEe
Confidence 36999999999999 77899999999999999999888766654 22 23555555542 2345899999999999999
Q ss_pred cCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCC
Q 017296 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 172 (374)
+.+++... .+........ +.. + .++..+++++++.|+
T Consensus 173 ~~~~~~~~----~~~~~~~~v~--------------------~~~------------------~-~~~~~~ll~~~~~dg 209 (408)
T 4a11_B 173 LKSGSCSH----ILQGHRQEIL--------------------AVS------------------W-SPRYDYILATASADS 209 (408)
T ss_dssp SSSSCCCE----EECCCCSCEE--------------------EEE------------------E-CSSCTTEEEEEETTS
T ss_pred CCCcceee----eecCCCCcEE--------------------EEE------------------E-CCCCCcEEEEEcCCC
Confidence 98764311 1110000000 000 1 112244567788899
Q ss_pred eEEEEecCCCc-eeEEeccCccCC--CCC---cCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee
Q 017296 173 EVEIWDLNTAE-RCTRLHQNSCGG--SPN---FSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (374)
Q Consensus 173 ~i~vWd~~~~~-~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~ 246 (374)
.|++||++++. .+..+....... ... ........+ ..+.++ ...+++++.||.|++||+++... ..
T Consensus 210 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~---~~~~~~----~~~l~~~~~dg~i~vwd~~~~~~-~~ 281 (408)
T 4a11_B 210 RVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNG---LCFTSD----GLHLLTVGTDNRMRLWNSSNGEN-TL 281 (408)
T ss_dssp CEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEE---EEECTT----SSEEEEEETTSCEEEEETTTCCB-CC
T ss_pred cEEEEECCCCCcccccccccccccceeeccccccccCceeE---EEEcCC----CCEEEEecCCCeEEEEECCCCcc-ce
Confidence 99999999876 333332211100 000 011111111 234332 23689999999999999986432 22
Q ss_pred eeecC-----ccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCe
Q 017296 247 AMKVH-----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR 321 (374)
Q Consensus 247 ~~~~h-----~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~ 321 (374)
.+..+ ...+...........++.++.|+.|++||+.... . ...+..|...|.+++|+|++++|++++.||.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~--~--~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~ 357 (408)
T 4a11_B 282 VNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGE--Q--ITMLKGHYKTVDCCVFQSNFQELYSGSRDCN 357 (408)
T ss_dssp CCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCC--E--EEEECCCSSCEEEEEEETTTTEEEEEETTSC
T ss_pred eccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCc--c--eeeeccCCCeEEEEEEcCCCCEEEEECCCCe
Confidence 22111 1122222222334457888999999999997543 2 2345567788999999999999999999999
Q ss_pred EEEEEccCCeEEEEecccCCceEEEEEeC-CCCEEEEEeCCCcEEEecC
Q 017296 322 VRIYNYRKGSALAILKYHHATCNAVSFSS-DCKLMASASEDSTVALWEL 369 (374)
Q Consensus 322 v~iwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~~W~~ 369 (374)
|++||+.+++.+.....+.. ...+.| +.....+++.|+.+++|+.
T Consensus 358 i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~~ 403 (408)
T 4a11_B 358 ILAWVPSLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEEGGTSAWSH 403 (408)
T ss_dssp EEEEEECC-----------------------------------------
T ss_pred EEEEeCCCCCccCCCCceEe---ccccccccceeecccCccCceeecCC
Confidence 99999999887765443332 233444 3345667889999999976
No 113
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.8e-25 Score=195.52 Aligned_cols=243 Identities=18% Similarity=0.222 Sum_probs=174.5
Q ss_pred ceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccC
Q 017296 51 RTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQAN 130 (374)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (374)
+....+.+|.. .+.++++ + +++++++++.|++|++||+.+++.. ...........
T Consensus 9 ~~~~~l~~h~~--~v~~~~~-~--~~~~l~s~~~dg~v~vw~~~~~~~~----~~~~~~~~~v~---------------- 63 (313)
T 3odt_A 9 QLSATLKGHDQ--DVRDVVA-V--DDSKVASVSRDGTVRLWSKDDQWLG----TVVYTGQGFLN---------------- 63 (313)
T ss_dssp EEEEEECCCSS--CEEEEEE-E--ETTEEEEEETTSEEEEEEESSSEEE----EEEEECSSCEE----------------
T ss_pred HHHHHhhCCCC--CcEEEEe-c--CCCEEEEEEcCCcEEEEECCCCEEE----EEeecCCccEE----------------
Confidence 44556667753 4778877 4 5678999999999999999765311 00000000000
Q ss_pred CCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCc---eeEEeccCccCCCCCcCCCCCcce
Q 017296 131 EPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE---RCTRLHQNSCGGSPNFSSKGRGMC 207 (374)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 207 (374)
+.. +.+ +.. ++++++.|+.+++|++.... ....+..+ .....+
T Consensus 64 ----~~~------------------~~~-~~~-~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~----------~~~i~~ 109 (313)
T 3odt_A 64 ----SVC------------------YDS-EKE-LLLFGGKDTMINGVPLFATSGEDPLYTLIGH----------QGNVCS 109 (313)
T ss_dssp ----EEE------------------EET-TTT-EEEEEETTSCEEEEETTCCTTSCC-CEECCC----------SSCEEE
T ss_pred ----EEE------------------ECC-CCC-EEEEecCCCeEEEEEeeecCCCCcccchhhc----------ccCEEE
Confidence 000 011 122 45567778999999987643 23333211 111112
Q ss_pred eEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEec-CCCceEEEecCCeEEEEEcCCCCC
Q 017296 208 MAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTG 286 (374)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~s~s~D~~i~lwd~~~~~~ 286 (374)
+ .+. + ..+++++.||.|++||. ......+..|..++.++.+.+ ++..+++++.|+.|++||..
T Consensus 110 ~---~~~-----~-~~l~~~~~d~~i~~~d~---~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~---- 173 (313)
T 3odt_A 110 L---SFQ-----D-GVVISGSWDKTAKVWKE---GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND---- 173 (313)
T ss_dssp E---EEE-----T-TEEEEEETTSEEEEEET---TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT----
T ss_pred E---Eec-----C-CEEEEEeCCCCEEEEcC---CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC----
Confidence 1 121 1 26899999999999993 456777888999999999977 88889999999999999943
Q ss_pred eEEEEEeeec-CCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEE
Q 017296 287 SCVIKKEINL-ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVA 365 (374)
Q Consensus 287 ~~~~~~~~~~-~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 365 (374)
... ..+.. +...+.+++|+|+++ +++++.||.|++||+.+++.+..+.+|...|.+++|+|++ .|++++.|+.|+
T Consensus 174 ~~~--~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~ 249 (313)
T 3odt_A 174 KVI--KTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVR 249 (313)
T ss_dssp EEE--EEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEE
T ss_pred ceE--EEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEE
Confidence 222 22333 667899999999998 8899999999999999999999999999999999999999 689999999999
Q ss_pred EecCCCC
Q 017296 366 LWELYPP 372 (374)
Q Consensus 366 ~W~~~~~ 372 (374)
+|++..+
T Consensus 250 iwd~~~~ 256 (313)
T 3odt_A 250 IWSKENG 256 (313)
T ss_dssp EECTTTC
T ss_pred EEECCCC
Confidence 9998654
No 114
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=3.2e-25 Score=205.67 Aligned_cols=250 Identities=18% Similarity=0.243 Sum_probs=177.3
Q ss_pred ceeEEEEeCCCCE-EEEecCCCcEEEEeCcccc----eeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecC
Q 017296 20 SVTDVCFHQTKPI-LFAGTTGGELRIWDTVQHR----TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE 94 (374)
Q Consensus 20 ~V~~l~~~~~~~~-l~s~s~D~~v~vWd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~ 94 (374)
....++++|+... +++++.||.|+|||+.... .+..+.+|. ..+.++++++. +++.|++|+.|++|++||+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~--~~V~~~~~~p~-~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHT--APVLDIAWCPH-NDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCS--SCEEEEEECTT-CTTEEEEEETTSEEEEEECC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCC--CCEEEEEeCCC-CCCEEEEEeCCCeEEEEEcc
Confidence 4456888887754 5568999999999985532 233455564 45888888873 45799999999999999998
Q ss_pred CCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeE
Q 017296 95 NGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEV 174 (374)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 174 (374)
++........ ......+. .+.|
T Consensus 113 ~~~~~~~~~~---------------------------------------------------------~~~~~~~h-~~~v 134 (402)
T 2aq5_A 113 DGGLVLPLRE---------------------------------------------------------PVITLEGH-TKRV 134 (402)
T ss_dssp TTCCSSCBCS---------------------------------------------------------CSEEEECC-SSCE
T ss_pred CCCCccccCC---------------------------------------------------------ceEEecCC-CCeE
Confidence 7632110000 00000000 0000
Q ss_pred EEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee--ecCc
Q 017296 175 EIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM--KVHL 252 (374)
Q Consensus 175 ~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~--~~h~ 252 (374)
.+ ..+.++ +...+++++.||.|++||+++ ......+ ..|.
T Consensus 135 -------------------------------~~---~~~~p~---~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~ 176 (402)
T 2aq5_A 135 -------------------------------GI---VAWHPT---AQNVLLSAGCDNVILVWDVGT-GAAVLTLGPDVHP 176 (402)
T ss_dssp -------------------------------EE---EEECSS---BTTEEEEEETTSCEEEEETTT-TEEEEEECTTTCC
T ss_pred -------------------------------EE---EEECcC---CCCEEEEEcCCCEEEEEECCC-CCccEEEecCCCC
Confidence 00 012221 212588999999999999986 4456666 7899
Q ss_pred cCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee-ecCCC-CeEEEEECCCCCEEEEE---eCCCeEEEEEc
Q 017296 253 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI-NLERP-GISGTSIRPDSKIAATA---GWDRRVRIYNY 327 (374)
Q Consensus 253 ~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~-~~~~~-~v~~~~~sp~~~~l~s~---~~dg~v~iwd~ 327 (374)
..|.+++|++++..+++++.|+.|++||++.. ... ..+ ..|.. .+..++|+|++++|++| +.|+.|++||+
T Consensus 177 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 177 DTIYSVDWSRDGALICTSCRDKRVRVIEPRKG--TVV--AEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEEETTTT--EEE--EEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred CceEEEEECCCCCEEEEEecCCcEEEEeCCCC--cee--eeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence 99999999999999999999999999999753 222 222 34443 37899999999999999 79999999999
Q ss_pred cCCeE-EEEec-ccCCceEEEEEeCCCCEEE-EEeCCCcEEEecCCCC
Q 017296 328 RKGSA-LAILK-YHHATCNAVSFSSDCKLMA-SASEDSTVALWELYPP 372 (374)
Q Consensus 328 ~~~~~-~~~~~-~h~~~v~~v~~sp~~~~la-s~s~D~~v~~W~~~~~ 372 (374)
.+++. +.... .|...+.+++|+|++++|+ +++.|+.|++|++..+
T Consensus 253 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~ 300 (402)
T 2aq5_A 253 KHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSE 300 (402)
T ss_dssp TBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSS
T ss_pred ccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCC
Confidence 88654 32222 4778899999999999886 5568999999998654
No 115
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.95 E-value=8.9e-25 Score=199.11 Aligned_cols=248 Identities=16% Similarity=0.185 Sum_probs=180.8
Q ss_pred eeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCc
Q 017296 55 SSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKD 134 (374)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (374)
.+.+|. ..+.++++++ ++++|++++.|++|++||+.+++... .+........
T Consensus 27 ~l~~h~--~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~----~~~~h~~~v~-------------------- 78 (369)
T 3zwl_B 27 KLTGHE--RPLTQVKYNK--EGDLLFSCSKDSSASVWYSLNGERLG----TLDGHTGTIW-------------------- 78 (369)
T ss_dssp EEECCS--SCEEEEEECT--TSCEEEEEESSSCEEEEETTTCCEEE----EECCCSSCEE--------------------
T ss_pred EEEEee--ceEEEEEEcC--CCCEEEEEeCCCEEEEEeCCCchhhh----hhhhcCCcEE--------------------
Confidence 344554 4588888987 67899999999999999998764210 1100000000
Q ss_pred ccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeee
Q 017296 135 CYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYL 214 (374)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (374)
+.. +.+ +.. ++++++.|+.|++||+++++.+..+... ....+ ..+.
T Consensus 79 ~~~------------------~~~-~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----------~~v~~---~~~~ 124 (369)
T 3zwl_B 79 SID------------------VDC-FTK-YCVTGSADYSIKLWDVSNGQCVATWKSP-----------VPVKR---VEFS 124 (369)
T ss_dssp EEE------------------ECT-TSS-EEEEEETTTEEEEEETTTCCEEEEEECS-----------SCEEE---EEEC
T ss_pred EEE------------------EcC-CCC-EEEEEeCCCeEEEEECCCCcEEEEeecC-----------CCeEE---EEEc
Confidence 000 111 223 3456677899999999999877766421 11111 1233
Q ss_pred cCCCCCceEEEEEecC-----CcEEEEeccCCCC----------ceeeeecCcc--CeEEEEEecCCCceEEEecCCeEE
Q 017296 215 PSKSQGFVNVLAGYED-----GSILVWDIRNPGI----------PLTAMKVHLE--PVLCLSIDESCNGGISGGADQKIV 277 (374)
Q Consensus 215 ~~~~~~~~~~~~gs~d-----g~i~iwdl~~~~~----------~~~~~~~h~~--~v~~~~~~~~~~~~~s~s~D~~i~ 277 (374)
++ ...+++++.+ |.|++||++.... +...+..|.. .+.++++++++..+++++.|+.|+
T Consensus 125 ~~----~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 200 (369)
T 3zwl_B 125 PC----GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKIS 200 (369)
T ss_dssp TT----SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEE
T ss_pred cC----CCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEE
Confidence 32 2358888888 9999999975432 3334455665 999999999999999999999999
Q ss_pred EEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEE
Q 017296 278 LYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMAS 357 (374)
Q Consensus 278 lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las 357 (374)
+||++.. .. ....+..+...+.+++|+|++++|++++.|+.|++||+.+++.+..+. +...+..++|+|+++++++
T Consensus 201 i~d~~~~-~~--~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~ 276 (369)
T 3zwl_B 201 KYDVSNN-YE--YVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIIL 276 (369)
T ss_dssp EEETTTT-TE--EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEE
T ss_pred EEECCCC-cE--eEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEE
Confidence 9999752 12 223455577789999999999999999999999999999999888887 7889999999999999999
Q ss_pred EeCCC--------------cEEEecCCCC
Q 017296 358 ASEDS--------------TVALWELYPP 372 (374)
Q Consensus 358 ~s~D~--------------~v~~W~~~~~ 372 (374)
++.++ .+++|++..+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~i~~~d~~~~ 305 (369)
T 3zwl_B 277 GGGQEAKDVTTTSANEGKFEARFYHKIFE 305 (369)
T ss_dssp EECCC-------------CEEEEEETTTC
T ss_pred eecCCCceEEEEecCCCcceeEEEecCCC
Confidence 99998 8999998643
No 116
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=2.1e-24 Score=199.02 Aligned_cols=290 Identities=14% Similarity=0.151 Sum_probs=198.7
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEE-EEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCcccccee-eeccccC
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKV-ISQGRDG 86 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l-~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~s~~~D~ 86 (374)
+++..+.+|.. +.+++|+|++++| ++++.|++|++||+.+++.+..+..+. .+.++++++ +++++ ++++.|+
T Consensus 23 ~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~---~v~~~~~sp--dg~~l~~~~~~~~ 96 (391)
T 1l0q_A 23 KVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS---SPQGVAVSP--DGKQVYVTNMASS 96 (391)
T ss_dssp EEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS---SEEEEEECT--TSSEEEEEETTTT
T ss_pred eEEEEeecCCC-cceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC---CccceEECC--CCCEEEEEECCCC
Confidence 55667777765 8999999999876 788899999999999988877665443 577888887 45655 5667789
Q ss_pred eEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEE
Q 017296 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (374)
Q Consensus 87 ~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (374)
+|++||+.+++... .+.... .. .. + .+ .++.+.+++
T Consensus 97 ~v~v~d~~~~~~~~----~~~~~~-~~--------------------~~--------~----------~~-s~dg~~l~~ 132 (391)
T 1l0q_A 97 TLSVIDTTSNTVAG----TVKTGK-SP--------------------LG--------L----------AL-SPDGKKLYV 132 (391)
T ss_dssp EEEEEETTTTEEEE----EEECSS-SE--------------------EE--------E----------EE-CTTSSEEEE
T ss_pred EEEEEECCCCeEEE----EEeCCC-Cc--------------------ce--------E----------EE-CCCCCEEEE
Confidence 99999998763210 000000 00 00 0 01 123345666
Q ss_pred cccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee
Q 017296 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (374)
Q Consensus 167 ~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~ 246 (374)
++..++.|++||+++++....+..+. .... ..+.+ .+...+++++.++.|++||++.. ....
T Consensus 133 ~~~~~~~v~~~d~~~~~~~~~~~~~~-----------~~~~---~~~~~---dg~~l~~~~~~~~~v~~~d~~~~-~~~~ 194 (391)
T 1l0q_A 133 TNNGDKTVSVINTVTKAVINTVSVGR-----------SPKG---IAVTP---DGTKVYVANFDSMSISVIDTVTN-SVID 194 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEECCS-----------SEEE---EEECT---TSSEEEEEETTTTEEEEEETTTT-EEEE
T ss_pred EeCCCCEEEEEECCCCcEEEEEecCC-----------Ccce---EEECC---CCCEEEEEeCCCCEEEEEECCCC-eEEE
Confidence 77888999999999988766654321 1111 12333 23333467889999999999763 3333
Q ss_pred eeecCccCeEEEEEecCCCceEEEe---cCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEE-EEEeCCCeE
Q 017296 247 AMKVHLEPVLCLSIDESCNGGISGG---ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA-ATAGWDRRV 322 (374)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~~~~s~s---~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~s~~~dg~v 322 (374)
.+ .+...+.++.|++++..+++++ .++.|++||++.. ... ..+..+ ..+.+++|+|+++++ ++++.|++|
T Consensus 195 ~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~--~~~--~~~~~~-~~~~~~~~s~dg~~l~~s~~~d~~v 268 (391)
T 1l0q_A 195 TV-KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN--KIT--ARIPVG-PDPAGIAVTPDGKKVYVALSFXNTV 268 (391)
T ss_dssp EE-ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT--EEE--EEEECC-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EE-ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCC--eEE--EEEecC-CCccEEEEccCCCEEEEEcCCCCEE
Confidence 33 3566889999999998888887 6899999999654 222 223333 357889999999977 677889999
Q ss_pred EEEEccCCeEEEEecccCCceE---EEE------------EeCCC----------CEEEEEeCCCcEEEecCCCC
Q 017296 323 RIYNYRKGSALAILKYHHATCN---AVS------------FSSDC----------KLMASASEDSTVALWELYPP 372 (374)
Q Consensus 323 ~iwd~~~~~~~~~~~~h~~~v~---~v~------------~sp~~----------~~las~s~D~~v~~W~~~~~ 372 (374)
++||+.+++.+..+..|..+.. .+. |+.+. ..+.+.+.|.++++|++.++
T Consensus 269 ~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g 343 (391)
T 1l0q_A 269 SVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDG 343 (391)
T ss_dssp EEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSS
T ss_pred EEEECCCCcEEEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCC
Confidence 9999999999888877654321 122 33221 34666788999999998654
No 117
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.94 E-value=2.8e-25 Score=200.86 Aligned_cols=246 Identities=17% Similarity=0.186 Sum_probs=171.8
Q ss_pred eeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCc
Q 017296 63 HGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGE 142 (374)
Q Consensus 63 ~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (374)
..+.++++++ +++.|++++.|++|++||+.++.. .........|.. ...+..+
T Consensus 12 ~~v~~~~~s~--~~~~l~~~~~d~~v~iw~~~~~~~----~~~~~~~~~~~~-----------------~v~~~~~---- 64 (342)
T 1yfq_A 12 DYISDIKIIP--SKSLLLITSWDGSLTVYKFDIQAK----NVDLLQSLRYKH-----------------PLLCCNF---- 64 (342)
T ss_dssp SCEEEEEEEG--GGTEEEEEETTSEEEEEEEETTTT----EEEEEEEEECSS-----------------CEEEEEE----
T ss_pred CcEEEEEEcC--CCCEEEEEcCCCeEEEEEeCCCCc----cccceeeeecCC-----------------ceEEEEE----
Confidence 3588888887 568999999999999999987631 000100000000 0000000
Q ss_pred eeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEec-CCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCc
Q 017296 143 TVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDL-NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (374)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (374)
. ++..+++++++.|+.|++||+ .+++. ..+... .+ .....++ .+.+ .
T Consensus 65 --------------~-~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~------~~--~~~v~~l---~~~~-----~ 112 (342)
T 1yfq_A 65 --------------I-DNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNN------EA--NLGICRI---CKYG-----D 112 (342)
T ss_dssp --------------E-ESSSEEEEEEETTSCEEEECSSSSSSE-EECBSC------CC--CSCEEEE---EEET-----T
T ss_pred --------------C-CCCCcEEEEEcCCCeEEEEEeccCCce-Eecccc------CC--CCceEEE---EeCC-----C
Confidence 0 122314566778899999999 87764 233210 01 1111222 2332 2
Q ss_pred eEEEEEecCCcEEEEeccCC--------CCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCC-CCCeEEEEE
Q 017296 222 VNVLAGYEDGSILVWDIRNP--------GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH-STGSCVIKK 292 (374)
Q Consensus 222 ~~~~~gs~dg~i~iwdl~~~--------~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~-~~~~~~~~~ 292 (374)
..+++++.||.|++||++.. ..++..+. |...+.++.++++. +++++.|+.|++||++. ...... .
T Consensus 113 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~--~ 187 (342)
T 1yfq_A 113 DKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGT--I 187 (342)
T ss_dssp TEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCE--E
T ss_pred CEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccce--e
Confidence 26899999999999999741 22344444 88999999999876 89999999999999976 332211 1
Q ss_pred eeecCCCCeEEEEECC-CCCEEEEEeCCCeEEEEEccCC------eEEEEecccCC---------ceEEEEEeCCCCEEE
Q 017296 293 EINLERPGISGTSIRP-DSKIAATAGWDRRVRIYNYRKG------SALAILKYHHA---------TCNAVSFSSDCKLMA 356 (374)
Q Consensus 293 ~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~v~iwd~~~~------~~~~~~~~h~~---------~v~~v~~sp~~~~la 356 (374)
....+...+.+++|+| +++++++++.||.|++|++... +....+..|.. .|.+++|+|++++|+
T Consensus 188 ~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 267 (342)
T 1yfq_A 188 EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY 267 (342)
T ss_dssp EECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE
T ss_pred eecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEE
Confidence 2234556799999999 9999999999999999999876 67778888865 999999999999999
Q ss_pred EEeCCCcEEEecCCCC
Q 017296 357 SASEDSTVALWELYPP 372 (374)
Q Consensus 357 s~s~D~~v~~W~~~~~ 372 (374)
+++.|+.|++||+..+
T Consensus 268 ~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 268 TAGSDGIISCWNLQTR 283 (342)
T ss_dssp EEETTSCEEEEETTTT
T ss_pred EecCCceEEEEcCccH
Confidence 9999999999998643
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.3e-26 Score=217.78 Aligned_cols=258 Identities=9% Similarity=0.032 Sum_probs=174.3
Q ss_pred cCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeec---eeeeEEeccCCccccceeeeccccCeEEEEe
Q 017296 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA---AHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (374)
Q Consensus 16 gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd 92 (374)
+|.+.|++++|+|+|.+|++++.||+|++||... .+..+. |.. ...+.+++|+| +++.|++|+.||+|++||
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP--DG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP--IESSIVVGNEDGELQFFS 157 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS--SSSCEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC--CCCEEEEEcCCCEEEEEE
Confidence 6789999999999999999999999999999543 444444 431 12478899988 789999999999999999
Q ss_pred cCCCCCCCCCc-eeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCC
Q 017296 93 IENGGLSSNPS-LTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (374)
Q Consensus 93 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 171 (374)
+.++.... +. +.+.+...+. ..+. ..+... .+.+++ +++++.|
T Consensus 158 ~~~~~l~~-~~~i~l~ti~~~~------~gh~-----------------~~V~sV--------awSPdg----Laass~D 201 (588)
T 2j04_A 158 IRKNSENT-PEFYFESSIRLSD------AGSK-----------------DWVTHI--------VWYEDV----LVAALSN 201 (588)
T ss_dssp CCCCTTTC-CCCEEEEEEECSC------TTCC-----------------CCEEEE--------EEETTE----EEEEETT
T ss_pred CCCCcccc-ccceeeeeeeccc------cccc-----------------ccEEEE--------EEcCCc----EEEEeCC
Confidence 98764211 11 0111100000 0000 000000 111222 3455668
Q ss_pred CeEEEEecCCCcee---EEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee
Q 017296 172 SEVEIWDLNTAERC---TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM 248 (374)
Q Consensus 172 ~~i~vWd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~ 248 (374)
++|++||+.+++.. .++... +.. ....+ .|. + ..+++++ +++|++||+... ......
T Consensus 202 ~tVrlWd~~~~~~~~~~~tL~~~-------h~~--~V~sv---aFs-----g-~~LASa~-~~tIkLWd~~~~-~~~~~~ 261 (588)
T 2j04_A 202 NSVFSMTVSASSHQPVSRMIQNA-------SRR--KITDL---KIV-----D-YKVVLTC-PGYVHKIDLKNY-SISSLK 261 (588)
T ss_dssp CCEEEECCCSSSSCCCEEEEECC-------CSS--CCCCE---EEE-----T-TEEEEEC-SSEEEEEETTTT-EEEEEE
T ss_pred CeEEEEECCCCccccceeeeccc-------ccC--cEEEE---EEE-----C-CEEEEEe-CCeEEEEECCCC-eEEEEE
Confidence 99999999887632 233211 100 11111 232 1 2577776 699999999753 221223
Q ss_pred ecCccCeEEEEE--ecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q 017296 249 KVHLEPVLCLSI--DESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 326 (374)
Q Consensus 249 ~~h~~~v~~~~~--~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd 326 (374)
.+|...+..++| ++++..+++++.||+ ++|.++ .++|+||+.+++++ |+++++|+
T Consensus 262 ~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d--------------------~~~~spd~~l~a~~--d~~v~lW~ 318 (588)
T 2j04_A 262 TGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED--------------------ELHVTADNIIAPYL--EKKFKKWS 318 (588)
T ss_dssp CSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS--------------------SEEEECCCSSHHHH--HHHHHHTT
T ss_pred cCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec--------------------cEEECCCceEEEEc--CCEEEEEE
Confidence 389999999999 999888999999999 999874 25589999888765 99999998
Q ss_pred ccCCeEEEEecccCCceEEEEEeCCCCEEEEEe
Q 017296 327 YRKGSALAILKYHHATCNAVSFSSDCKLMASAS 359 (374)
Q Consensus 327 ~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s 359 (374)
...+. +..+.+ ...|.+++|||||+.+|+++
T Consensus 319 ~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 319 TIWNE-FNNYET-TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp TTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEE
T ss_pred CCCCc-eeeecc-ceEEEEEEECCCCCEEEEEE
Confidence 75444 444544 66799999999999999986
No 119
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1e-23 Score=192.88 Aligned_cols=148 Identities=21% Similarity=0.291 Sum_probs=126.0
Q ss_pred EEEEEecCCcEEEEeccCCC-CceeeeecCccCeEEEEEecC--CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCC
Q 017296 223 NVLAGYEDGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 299 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 299 (374)
.+++|+.||.|++||++... .....+..|..+|.++.|+++ +..+++++.|+.|++||++....... ..+..|..
T Consensus 71 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~--~~~~~~~~ 148 (379)
T 3jrp_A 71 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP--IIIDAHAI 148 (379)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCE--EEEECCTT
T ss_pred EEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceee--EEecCCCC
Confidence 58899999999999998642 145667789999999999988 88899999999999999976533222 23455777
Q ss_pred CeEEEEECC-------------CCCEEEEEeCCCeEEEEEccCCe----EEEEecccCCceEEEEEeCC---CCEEEEEe
Q 017296 300 GISGTSIRP-------------DSKIAATAGWDRRVRIYNYRKGS----ALAILKYHHATCNAVSFSSD---CKLMASAS 359 (374)
Q Consensus 300 ~v~~~~~sp-------------~~~~l~s~~~dg~v~iwd~~~~~----~~~~~~~h~~~v~~v~~sp~---~~~las~s 359 (374)
.+.+++|+| ++++|++++.||+|++||+.+++ ....+.+|...|.+++|+|+ +++|++++
T Consensus 149 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 149 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 899999999 69999999999999999998764 45678889999999999999 89999999
Q ss_pred CCCcEEEecCCCC
Q 017296 360 EDSTVALWELYPP 372 (374)
Q Consensus 360 ~D~~v~~W~~~~~ 372 (374)
.|+.|++|++..+
T Consensus 229 ~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 229 QDRTCIIWTQDNE 241 (379)
T ss_dssp TTSCEEEEEESST
T ss_pred CCCEEEEEeCCCC
Confidence 9999999998653
No 120
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=1.3e-24 Score=192.26 Aligned_cols=97 Identities=10% Similarity=0.028 Sum_probs=63.1
Q ss_pred EEEEecCCcEEEEeccCCCCceeee-----ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCC
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAM-----KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 298 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~ 298 (374)
+++|+.|++|++||..+ +..+..+ .+|...+.+..++ +..+++++.|++|+|||+.... +. ..+..|.
T Consensus 253 laSGs~D~tIklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk--~l--~tL~gH~ 325 (356)
T 2w18_A 253 ESLRSPVFQLIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQ--CT--ALLPPVS 325 (356)
T ss_dssp -----CCEEEEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCS--EE--EEECCC-
T ss_pred eeccCCCcEEEEEECCC-CEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCc--EE--EEecCCC
Confidence 55677777777777754 2222222 3555554444443 5567999999999999997543 33 2344454
Q ss_pred CCe-EEEEECCCCCEEEEEeCCCeEEEEEc
Q 017296 299 PGI-SGTSIRPDSKIAATAGWDRRVRIYNY 327 (374)
Q Consensus 299 ~~v-~~~~~sp~~~~l~s~~~dg~v~iwd~ 327 (374)
..+ ..++||||+++|++|+.|++|||||+
T Consensus 326 ~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 326 DQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp -CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 444 46899999999999999999999985
No 121
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.7e-24 Score=194.27 Aligned_cols=184 Identities=14% Similarity=0.116 Sum_probs=141.4
Q ss_pred eEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCC-
Q 017296 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP- 241 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~- 241 (374)
.++++|+.|++|++||+.+++.+..+.... ...+ .+.+ .+++++.|++|++|+....
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~----------v~~~-----~~~~-------~~~s~s~D~~i~~w~~~~~~ 106 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITTITTPN----------PRTG-----GEHP-------AIISRGPCNRLLLLYPGNQI 106 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEEEEEEC----------CCTT-----CCCC-------SEEEECSTTEEEEEETTTEE
T ss_pred CEEEEECCCCcEEEEECCCCcEEEEEecCC----------ceee-----eeCC-------ceEEecCCCeEEEEEccCce
Confidence 467788899999999999998776664210 0000 0111 1789999999999976521
Q ss_pred -------CCceeeee-cCccCeEEEEEec--CCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCC
Q 017296 242 -------GIPLTAMK-VHLEPVLCLSIDE--SCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK 311 (374)
Q Consensus 242 -------~~~~~~~~-~h~~~v~~~~~~~--~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 311 (374)
...+..+. .|..+|.++.++| ++..+++++.|++|++||++... .... ....+...+.+++|+|+++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~--~~~~-~~~~~~~~i~~~~~~pdg~ 183 (343)
T 3lrv_A 107 TILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDS--QYIV-HSAKSDVEYSSGVLHKDSL 183 (343)
T ss_dssp EEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSC--EEEE-ECCCSSCCCCEEEECTTSC
T ss_pred EEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCc--EEEE-EecCCCCceEEEEECCCCC
Confidence 11122232 5668999999999 99999999999999999997543 2211 1122344699999999999
Q ss_pred EEEEEeCCCeEEEEEccCCeEE-EEecc-cCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 312 IAATAGWDRRVRIYNYRKGSAL-AILKY-HHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 312 ~l~s~~~dg~v~iwd~~~~~~~-~~~~~-h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
+|++|+.||+|++||+++++.+ ..+.. |.+.|.+++|+|+|++|++++ |++|++||+..+
T Consensus 184 ~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~ 245 (343)
T 3lrv_A 184 LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKD 245 (343)
T ss_dssp EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSS
T ss_pred EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCC
Confidence 9999999999999999999877 78888 999999999999999999999 559999998644
No 122
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.92 E-value=6.2e-23 Score=184.91 Aligned_cols=280 Identities=15% Similarity=0.156 Sum_probs=156.4
Q ss_pred CCeEEeecCCCceeEEEEeC--CCCEEEEecCCCcEEEEeCccc---------ceeeeeeeeeceeeeEEeccCCccccc
Q 017296 9 DPVAVLRGHRASVTDVCFHQ--TKPILFAGTTGGELRIWDTVQH---------RTVSSSWVHSAAHGIVSVATGPSIGLN 77 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~--~~~~l~s~s~D~~v~vWd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (374)
++...+.+|..+|++|+|+| ++.+|++|+.|++|++||+.++ +.+..+..|. ..+.++++++...++
T Consensus 48 ~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~ 125 (351)
T 3f3f_A 48 ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSK--GSLYSVKFAPAHLGL 125 (351)
T ss_dssp EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCS--SCEEEEEECCGGGCS
T ss_pred eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccC--CceeEEEEcCCCCCc
Confidence 46778899999999999998 5999999999999999999876 3355555554 457888888742268
Q ss_pred eeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCC
Q 017296 78 KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVP 157 (374)
Q Consensus 78 ~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (374)
.+++++.|++|++||+++++.......... ........ . .......+..+.+.
T Consensus 126 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~-----~~~~~~~~--~----~~~~~~~~~~~~p~---------------- 178 (351)
T 3f3f_A 126 KLACLGNDGILRLYDALEPSDLRSWTLTSE-----MKVLSIPP--A----NHLQSDFCLSWCPS---------------- 178 (351)
T ss_dssp EEEEEETTCEEEEEECSSTTCTTCCEEEEE-----EESCSCCC--S----SCSCCCEEEEECCC----------------
T ss_pred EEEEecCCCcEEEecCCChHHhcccccccc-----cccccccc--C----CcccceeEEEeccC----------------
Confidence 899999999999999988754321110000 00000000 0 00000000000000
Q ss_pred CCCCceEEEcccCCCeEEEEecCCCce--eEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEE
Q 017296 158 AEGPKYMAVAGEQLSEVEIWDLNTAER--CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILV 235 (374)
Q Consensus 158 ~~~~~~~~~~~~~d~~i~vWd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~i 235 (374)
..+.. ++++++.++.+.+|+...++. ...+..+ .....+ ..+.++.......+++|+.||.|++
T Consensus 179 ~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h----------~~~i~~---~~~~p~~~~~~~~l~s~~~dg~i~i 244 (351)
T 3f3f_A 179 RFSPE-KLAVSALEQAIIYQRGKDGKLHVAAKLPGH----------KSLIRS---ISWAPSIGRWYQLIATGCKDGRIRI 244 (351)
T ss_dssp SSSCC-EEEEEETTEEEEEEECTTSCEEEEEECCCC----------CSCEEE---EEECCCSSCSSEEEEEEETTSCEEE
T ss_pred CCCCc-EEEEecCCCcEEEEccCCCceeeeeecCCC----------CcceeE---EEECCCCCCcceEEEEEcCCCeEEE
Confidence 01123 455666778888888777654 2332211 111112 2344432111147999999999999
Q ss_pred EeccCCCCceeeeecCccCeEEEEEecCCCceE----EEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCC
Q 017296 236 WDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI----SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSK 311 (374)
Q Consensus 236 wdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~----s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 311 (374)
||++...... ....+..........+...... .+.....+.+|+.. .......+..|...|.+++|+|+++
T Consensus 245 wd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~h~~~v~~~~~s~~~~ 319 (351)
T 3f3f_A 245 FKITEKLSPL-ASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNL----QVELLSEHDDHNGEVWSVSWNLTGT 319 (351)
T ss_dssp EEEEECC----------------------------------------CCSE----EEEEEEEECTTSSCEEEEEECSSSC
T ss_pred EeCCCCcCcc-ccCCcccceeccCCCcccccccccccccccceeeeecccc----cccEEEEEecccccEEEEEEcCCCC
Confidence 9997643222 1222222222222222222222 22334444555332 2233445667788899999999999
Q ss_pred EEEEEeCCCeEEEEEccCCeEEEEe
Q 017296 312 IAATAGWDRRVRIYNYRKGSALAIL 336 (374)
Q Consensus 312 ~l~s~~~dg~v~iwd~~~~~~~~~~ 336 (374)
+|++++.||+|++||+.+++.+..+
T Consensus 320 ~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 320 ILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp CEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEEEecCCCcEEEEecCcCcchhhe
Confidence 9999999999999999987655443
No 123
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=1.5e-22 Score=189.49 Aligned_cols=220 Identities=19% Similarity=0.273 Sum_probs=161.3
Q ss_pred CCCeEEeecCCCceeEEEEeCCCC-EEEEecCCCcEEEEeCcccce-------eeeeeeeeceeeeEEeccCCcccccee
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRT-------VSSSWVHSAAHGIVSVATGPSIGLNKV 79 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~-~l~s~s~D~~v~vWd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (374)
.+++..+.+|...|++|+|+|++. +|++|+.||+|++||+.++.. ...+..|. ..+.++++++. +.+.+
T Consensus 171 ~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~--~~v~~v~~~p~-~~~~l 247 (430)
T 2xyi_A 171 CQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHT--AVVEDVAWHLL-HESLF 247 (430)
T ss_dssp CCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCS--SCEEEEEECSS-CTTEE
T ss_pred CCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCC--CCEeeeEEeCC-CCCEE
Confidence 478899999999999999999988 999999999999999976322 22333443 34778888773 34789
Q ss_pred eeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCC
Q 017296 80 ISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAE 159 (374)
Q Consensus 80 ~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (374)
++++.|++|++||++++.... +...
T Consensus 248 ~s~~~dg~i~i~d~~~~~~~~-~~~~------------------------------------------------------ 272 (430)
T 2xyi_A 248 GSVADDQKLMIWDTRNNNTSK-PSHT------------------------------------------------------ 272 (430)
T ss_dssp EEEETTSEEEEEETTCSCSSS-CSEE------------------------------------------------------
T ss_pred EEEeCCCeEEEEECCCCCCCc-ceeE------------------------------------------------------
Confidence 999999999999998652100 0000
Q ss_pred CCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEecc
Q 017296 160 GPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (374)
Q Consensus 160 ~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~ 239 (374)
+ .+ ....| . + ..+.+. +...+++|+.||.|++||++
T Consensus 273 -----~-~~-~~~~v-----------~--------------------~---i~~~p~---~~~~l~tg~~dg~v~vwd~~ 308 (430)
T 2xyi_A 273 -----V-DA-HTAEV-----------N--------------------C---LSFNPY---SEFILATGSADKTVALWDLR 308 (430)
T ss_dssp -----E-EC-CSSCE-----------E--------------------E---EEECSS---CTTEEEEEETTSEEEEEETT
T ss_pred -----e-ec-CCCCe-----------E--------------------E---EEeCCC---CCCEEEEEeCCCeEEEEeCC
Confidence 0 00 00000 0 0 012211 22247889999999999998
Q ss_pred CCCCceeeeecCccCeEEEEEecCCCc-eEEEecCCeEEEEEcCCCCCe----------EEEEEeeecCCCCeEEEEECC
Q 017296 240 NPGIPLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGS----------CVIKKEINLERPGISGTSIRP 308 (374)
Q Consensus 240 ~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~s~s~D~~i~lwd~~~~~~~----------~~~~~~~~~~~~~v~~~~~sp 308 (374)
....++..+..|..+|.++.|+|++.. +++++.|+.|++||+...... ..+......|...+..++|+|
T Consensus 309 ~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 388 (430)
T 2xyi_A 309 NLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNP 388 (430)
T ss_dssp CTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECS
T ss_pred CCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECC
Confidence 766678888899999999999998854 789999999999999752210 012234455667899999999
Q ss_pred CCC-EEEEEeCCCeEEEEEccC
Q 017296 309 DSK-IAATAGWDRRVRIYNYRK 329 (374)
Q Consensus 309 ~~~-~l~s~~~dg~v~iwd~~~ 329 (374)
+++ +|++++.||.|++|++.+
T Consensus 389 ~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 389 NEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp SSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCEEEEEECCCCEEEeEccc
Confidence 999 899999999999999864
No 124
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=7.8e-22 Score=189.61 Aligned_cols=308 Identities=11% Similarity=0.014 Sum_probs=196.8
Q ss_pred CCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeC--cccceeeeeeeeeceeeeEEeccCCc--cccceeeecc
Q 017296 8 PDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDT--VQHRTVSSSWVHSAAHGIVSVATGPS--IGLNKVISQG 83 (374)
Q Consensus 8 ~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~s~~ 83 (374)
.+++.++..+.. +..++|+|+|++|++++.|++|.+||+ .+++.+..+..+ .....+++++. .+++++++++
T Consensus 169 ~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g---~~p~~va~sp~~~~dg~~l~v~~ 244 (543)
T 1nir_A 169 KKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG---IEARSVESSKFKGYEDRYTIAGA 244 (543)
T ss_dssp CCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC---SEEEEEEECCSTTCTTTEEEEEE
T ss_pred ceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC---CCcceEEeCCCcCCCCCEEEEEE
Confidence 456777773333 889999999999999999999999999 788877766533 23456677651 0457888777
Q ss_pred -ccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCc
Q 017296 84 -RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPK 162 (374)
Q Consensus 84 -~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (374)
.+++|++||..++++.. .+.... ... .. ..+.+...+.. ..+ .....
T Consensus 245 ~~~~~v~v~D~~t~~~~~----~i~~~g---~~~----~~-------------~~~~~~~~v~~-------i~~-s~~~~ 292 (543)
T 1nir_A 245 YWPPQFAIMDGETLEPKQ----IVSTRG---MTV----DT-------------QTYHPEPRVAA-------IIA-SHEHP 292 (543)
T ss_dssp EESSEEEEEETTTCCEEE----EEECCE---ECS----SS-------------CCEESCCCEEE-------EEE-CSSSS
T ss_pred ccCCeEEEEeccccccce----eecccC---ccc----Cc-------------cccccCCceEE-------EEE-CCCCC
Confidence 58999999998764311 111000 000 00 00000000000 001 12223
Q ss_pred eEEEcccCCCeEEEEecCCCceeE--EeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccC
Q 017296 163 YMAVAGEQLSEVEIWDLNTAERCT--RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~ 240 (374)
.++++...+++|.+||+.+.+.+. .+.... + ... + .|.+ .+...++++..+++|.+||+++
T Consensus 293 ~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~------~---~~~--~---~~sp---dg~~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 293 EFIVNVKETGKVLLVNYKDIDNLTVTSIGAAP------F---LHD--G---GWDS---SHRYFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp EEEEEETTTTEEEEEECTTSSSCEEEEEECCS------S---CCC--E---EECT---TSCEEEEEEGGGTEEEEEETTT
T ss_pred EEEEEECCCCeEEEEEecCCCcceeEEeccCc------C---ccC--c---eECC---CCCEEEEEecCCCeEEEEECCC
Confidence 456667778999999998876433 222110 0 000 0 2322 2333345566789999999986
Q ss_pred CCCceeeeec----CccCeEEEEEecC-CCceEEEe-cCCeEEEEEcCCCC-----CeEEEEEeeecCCCCeEEEEECCC
Q 017296 241 PGIPLTAMKV----HLEPVLCLSIDES-CNGGISGG-ADQKIVLYNLDHST-----GSCVIKKEINLERPGISGTSIRPD 309 (374)
Q Consensus 241 ~~~~~~~~~~----h~~~v~~~~~~~~-~~~~~s~s-~D~~i~lwd~~~~~-----~~~~~~~~~~~~~~~v~~~~~sp~ 309 (374)
. .....+.. |......+ ++|+ +..+++++ .|++|++||++... .++ ...+..+..+...+.|||+
T Consensus 356 g-~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~--v~~l~~~g~~~~~v~~~pd 431 (543)
T 1nir_A 356 R-RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKK--VAELQGQGGGSLFIKTHPK 431 (543)
T ss_dssp T-EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSE--EEEEECSCSCCCCEECCTT
T ss_pred C-eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeE--EEEEEcCCCCceEEEcCCC
Confidence 3 44455543 54433333 4666 45556665 68999999997521 233 3445556667788999999
Q ss_pred CCEEEEEe-------CCCeEEEEEccCCeEE-EEe--------cccCCceEEEEEeCCCCEEEEEe-----CCCcEEEec
Q 017296 310 SKIAATAG-------WDRRVRIYNYRKGSAL-AIL--------KYHHATCNAVSFSSDCKLMASAS-----EDSTVALWE 368 (374)
Q Consensus 310 ~~~l~s~~-------~dg~v~iwd~~~~~~~-~~~--------~~h~~~v~~v~~sp~~~~las~s-----~D~~v~~W~ 368 (374)
+++|++++ .+++|++||+.+++.. ..+ ..|...+..++|+|+|++|..+. .|+.|.+||
T Consensus 432 g~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 432 SSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVD 511 (543)
T ss_dssp CCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEE
T ss_pred CCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEE
Confidence 99999887 2789999999988766 444 35678899999999999887652 489999999
Q ss_pred CCCC
Q 017296 369 LYPP 372 (374)
Q Consensus 369 ~~~~ 372 (374)
....
T Consensus 512 ~~t~ 515 (543)
T 1nir_A 512 DKTL 515 (543)
T ss_dssp TTTT
T ss_pred CCCc
Confidence 7643
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=5.5e-23 Score=190.19 Aligned_cols=202 Identities=9% Similarity=0.008 Sum_probs=125.4
Q ss_pred eEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecC----CCCCceEEEEEecCCcEEEEec
Q 017296 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPS----KSQGFVNVLAGYEDGSILVWDI 238 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~gs~dg~i~iwdl 238 (374)
.++++++.|++|++||+++++........ ...+|... ...+ .|.|. .......|++|+.|++|++||+
T Consensus 102 ~~las~~~d~~v~lw~~~~~~~~~~~~~~---~~~gH~~~--v~~v---~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~ 173 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKNETIITQHVLG---GKSGHHNF--VNDI---DIADVYSADNRLAEQVIASVGDDCTLIIWRL 173 (393)
T ss_dssp EEEEEEETTSCEEEEEEETTEEEEEEEEC---TTTSCSSC--EEEE---EEEEEECTTCSEEEEEEEEEETTSEEEEEEE
T ss_pred CEEEEEeCCCcEEEEECCCCccceeeeec---ccCCCCCc--eEEE---EEccccccccCCCCCEEEEEECCCeEEEEEC
Confidence 35677888999999999887653321110 01122221 2222 22221 1112346899999999999999
Q ss_pred cCCCCceeeeecCccCeEEEEEecCCC-ceEEEecCCeEEEEEcCCCCCeEEEE---------------------Eeeec
Q 017296 239 RNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIK---------------------KEINL 296 (374)
Q Consensus 239 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~s~D~~i~lwd~~~~~~~~~~~---------------------~~~~~ 296 (374)
+.. .+...+..|..++.+++|+|++. .+++++.|++|++||+.......... .....
T Consensus 174 ~~~-~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 252 (393)
T 4gq1_A 174 TDE-GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSG 252 (393)
T ss_dssp ETT-EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------C
T ss_pred CCC-ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccc
Confidence 763 45566778999999999999764 68999999999999997543211110 01123
Q ss_pred CCCCeEEEEEC-CCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeC--------------------CCCEE
Q 017296 297 ERPGISGTSIR-PDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSS--------------------DCKLM 355 (374)
Q Consensus 297 ~~~~v~~~~~s-p~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp--------------------~~~~l 355 (374)
+...+.++.|+ |+++.|++++.|+++++||+..++....+..|...+..+.+.| ++.++
T Consensus 253 ~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 253 IASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFA 332 (393)
T ss_dssp CSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEE
T ss_pred ccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEE
Confidence 45567788876 8999999999999999999988877666666665555544443 33477
Q ss_pred EEEeCCCcEEEecCCCCC
Q 017296 356 ASASEDSTVALWELYPPH 373 (374)
Q Consensus 356 as~s~D~~v~~W~~~~~~ 373 (374)
++|+.|++|+|||+..+.
T Consensus 333 ~sgs~Dg~V~lwd~~~~~ 350 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEKD 350 (393)
T ss_dssp EEETTTTEEEEEETTCTT
T ss_pred EEECCCCEEEEEECCCCc
Confidence 889999999999997664
No 126
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.91 E-value=7.4e-22 Score=189.75 Aligned_cols=291 Identities=11% Similarity=0.048 Sum_probs=193.1
Q ss_pred EEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEec--CCCCCCCCC
Q 017296 25 CFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDI--ENGGLSSNP 102 (374)
Q Consensus 25 ~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~--~~~~~~~~~ 102 (374)
+|+|++.++++++.|++|.+||..+++.+.++..+.. +..+++++ ++++|++++.|++|++||+ .+++..
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~---~~~v~~sp--dg~~l~v~~~d~~V~v~D~~~~t~~~~--- 215 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA---VHISRMSA--SGRYLLVIGRDARIDMIDLWAKEPTKV--- 215 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT---EEEEEECT--TSCEEEEEETTSEEEEEETTSSSCEEE---
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc---cceEEECC--CCCEEEEECCCCeEEEEECcCCCCcEE---
Confidence 4789999999999999999999999988877763322 44667777 6789999999999999999 554211
Q ss_pred ceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCC---CCCceEEEcccCCCeEEEEec
Q 017296 103 SLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA---EGPKYMAVAGEQLSEVEIWDL 179 (374)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~i~vWd~ 179 (374)
..+..... +.. + .+.+ .++++++++...+++|.+||.
T Consensus 216 -~~i~~g~~----------p~~-------------------v----------a~sp~~~~dg~~l~v~~~~~~~v~v~D~ 255 (543)
T 1nir_A 216 -AEIKIGIE----------ARS-------------------V----------ESSKFKGYEDRYTIAGAYWPPQFAIMDG 255 (543)
T ss_dssp -EEEECCSE----------EEE-------------------E----------EECCSTTCTTTEEEEEEEESSEEEEEET
T ss_pred -EEEecCCC----------cce-------------------E----------EeCCCcCCCCCEEEEEEccCCeEEEEec
Confidence 01110000 000 0 0112 034566666666899999999
Q ss_pred CCCceeEEeccCccC-CCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEE
Q 017296 180 NTAERCTRLHQNSCG-GSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCL 258 (374)
Q Consensus 180 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~ 258 (374)
.+++++..+...... ....+.+..+ ...+ .+.+ .+...+++...++.|.+||+............+...+..+
T Consensus 256 ~t~~~~~~i~~~g~~~~~~~~~~~~~--v~~i-~~s~---~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~ 329 (543)
T 1nir_A 256 ETLEPKQIVSTRGMTVDTQTYHPEPR--VAAI-IASH---EHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDG 329 (543)
T ss_dssp TTCCEEEEEECCEECSSSCCEESCCC--EEEE-EECS---SSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCE
T ss_pred cccccceeecccCcccCccccccCCc--eEEE-EECC---CCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCc
Confidence 999887776532110 0000001111 1111 1222 2344577888999999999976433221122356678889
Q ss_pred EEecCCCceEEE-ecCCeEEEEEcCCCCCeEEEEEeee--cCCCCeEEEEECCC-CCEEEEEe-CCCeEEEEEccC----
Q 017296 259 SIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEIN--LERPGISGTSIRPD-SKIAATAG-WDRRVRIYNYRK---- 329 (374)
Q Consensus 259 ~~~~~~~~~~s~-s~D~~i~lwd~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~-~~~l~s~~-~dg~v~iwd~~~---- 329 (374)
.|+|++..++++ ..+++|++||++.. ++....... .|......+ ++|+ +++++++. .|++|.+||..+
T Consensus 330 ~~spdg~~l~va~~~~~~v~v~D~~tg--~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~ 406 (543)
T 1nir_A 330 GWDSSHRYFMTAANNSNKVAVIDSKDR--RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP 406 (543)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEETTTT--EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred eECCCCCEEEEEecCCCeEEEEECCCC--eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc
Confidence 999999977655 56899999998743 333222111 122122222 5787 66677775 589999999988
Q ss_pred ---CeEEEEecccCCceEEEEEeCCCCEEEEEe-------CCCcEEEecCCCC
Q 017296 330 ---GSALAILKYHHATCNAVSFSSDCKLMASAS-------EDSTVALWELYPP 372 (374)
Q Consensus 330 ---~~~~~~~~~h~~~v~~v~~sp~~~~las~s-------~D~~v~~W~~~~~ 372 (374)
.+.++++.+|...+..++|+|||++|++++ .|.+|++||+...
T Consensus 407 ~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~ 459 (543)
T 1nir_A 407 QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNL 459 (543)
T ss_dssp TTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCT
T ss_pred hhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCC
Confidence 789999999998889999999999999987 2789999999754
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.90 E-value=4e-21 Score=179.47 Aligned_cols=289 Identities=12% Similarity=0.086 Sum_probs=186.2
Q ss_pred cCCCceeEEE---EeCCCCEEEE--------------ecCCC--cEEEEeCccc--ceeeeeeeeeceeeeEEeccCCcc
Q 017296 16 GHRASVTDVC---FHQTKPILFA--------------GTTGG--ELRIWDTVQH--RTVSSSWVHSAAHGIVSVATGPSI 74 (374)
Q Consensus 16 gH~~~V~~l~---~~~~~~~l~s--------------~s~D~--~v~vWd~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 74 (374)
.+...+..++ |++++..++. ++.|+ .|.+||..++ +.+..+..+ ..+.++++++
T Consensus 58 ~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~---~~~~~~~~s~-- 132 (433)
T 3bws_A 58 DKNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG---FQPKSVRFID-- 132 (433)
T ss_dssp ETTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS---SCBCCCEESS--
T ss_pred ccCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC---CCceEEEEeC--
Confidence 3456778888 8887776553 33444 3444444334 333333322 2345677776
Q ss_pred ccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCC
Q 017296 75 GLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKD 154 (374)
Q Consensus 75 ~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (374)
++..+++++.|++|++||+.+++...... ......|...+ .+..
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--~~~~~~~~~~v-----------------~~~~----------------- 176 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTVRLSP--PEKYKKKLGFV-----------------ETIS----------------- 176 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEEEECC--CHHHHTTCCEE-----------------EEEE-----------------
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEeeecC--cccccccCCce-----------------eEEE-----------------
Confidence 56788889999999999998874310000 00000000000 0000
Q ss_pred CCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEE
Q 017296 155 DVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL 234 (374)
Q Consensus 155 ~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~ 234 (374)
+ .++ ..++++++.|+.|++||+++++.+..+..+. ....++ .+.++ +...+++++.|+.|+
T Consensus 177 -~-~~~-~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~----------~~~~~~---~~~~~---~~~l~~~~~~~~~i~ 237 (433)
T 3bws_A 177 -I-PEH-NELWVSQMQANAVHVFDLKTLAYKATVDLTG----------KWSKIL---LYDPI---RDLVYCSNWISEDIS 237 (433)
T ss_dssp -E-GGG-TEEEEEEGGGTEEEEEETTTCCEEEEEECSS----------SSEEEE---EEETT---TTEEEEEETTTTEEE
T ss_pred -E-cCC-CEEEEEECCCCEEEEEECCCceEEEEEcCCC----------CCeeEE---EEcCC---CCEEEEEecCCCcEE
Confidence 0 011 2356677788999999999988776664221 111111 23332 333345677899999
Q ss_pred EEeccCCCCceeeeecCccCeEEEEEecCCCceEEEe--------cCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEE
Q 017296 235 VWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG--------ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSI 306 (374)
Q Consensus 235 iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s--------~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 306 (374)
+||+++ ......+.. ...+.++++++++..+++++ .|+.|++||++.. ..... . .+...+..++|
T Consensus 238 ~~d~~~-~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~--~~~~~--~-~~~~~~~~~~~ 310 (433)
T 3bws_A 238 VIDRKT-KLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKE--KLIDT--I-GPPGNKRHIVS 310 (433)
T ss_dssp EEETTT-TEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTT--EEEEE--E-EEEECEEEEEE
T ss_pred EEECCC-CcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCC--cEEee--c-cCCCCcceEEE
Confidence 999975 344444544 34589999999998888887 5899999999744 22211 1 11235788999
Q ss_pred CCCCCE-EEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeC---------------CCcEEEecCC
Q 017296 307 RPDSKI-AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE---------------DSTVALWELY 370 (374)
Q Consensus 307 sp~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~---------------D~~v~~W~~~ 370 (374)
+|+++. +++++.|++|++||+.+++....+. +...+.+++|+|+|++|++++. ||.|++||+.
T Consensus 311 ~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 311 GNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp CSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred CCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECC
Confidence 999975 4677899999999999998887776 7778999999999998888876 5799999986
Q ss_pred CC
Q 017296 371 PP 372 (374)
Q Consensus 371 ~~ 372 (374)
.+
T Consensus 390 ~~ 391 (433)
T 3bws_A 390 TD 391 (433)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 128
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.90 E-value=5e-22 Score=198.71 Aligned_cols=148 Identities=21% Similarity=0.287 Sum_probs=126.4
Q ss_pred EEEEEecCCcEEEEeccCCC-CceeeeecCccCeEEEEEecC--CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCC
Q 017296 223 NVLAGYEDGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDES--CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 299 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~-~~~~~~~~h~~~v~~~~~~~~--~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 299 (374)
.+++|+.||.|++||++... .....+.+|..+|.++.|+|+ +..+++++.||.|++||++....... .....|..
T Consensus 69 ~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~--~~~~~~~~ 146 (753)
T 3jro_A 69 ILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSP--IIIDAHAI 146 (753)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCC--EEEECCSS
T ss_pred EEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcce--eEeecCCC
Confidence 58999999999999998632 145667789999999999998 88999999999999999976532222 23345677
Q ss_pred CeEEEEECC-------------CCCEEEEEeCCCeEEEEEccCC----eEEEEecccCCceEEEEEeCC---CCEEEEEe
Q 017296 300 GISGTSIRP-------------DSKIAATAGWDRRVRIYNYRKG----SALAILKYHHATCNAVSFSSD---CKLMASAS 359 (374)
Q Consensus 300 ~v~~~~~sp-------------~~~~l~s~~~dg~v~iwd~~~~----~~~~~~~~h~~~v~~v~~sp~---~~~las~s 359 (374)
.+.+++|+| +++++++|+.||+|++||+.++ +....+.+|...|.+++|+|+ +++|++++
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 899999999 5899999999999999999876 556778899999999999999 89999999
Q ss_pred CCCcEEEecCCCC
Q 017296 360 EDSTVALWELYPP 372 (374)
Q Consensus 360 ~D~~v~~W~~~~~ 372 (374)
.|++|++|++..+
T Consensus 227 ~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 227 QDRTCIIWTQDNE 239 (753)
T ss_dssp SSSCEEEEEESSS
T ss_pred cCCEEEEecCCCC
Confidence 9999999998653
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.89 E-value=2.7e-20 Score=167.78 Aligned_cols=273 Identities=9% Similarity=0.118 Sum_probs=164.3
Q ss_pred EEEEecCCCcEEEEeCc-ccc--eeeeeeeeeceeeeEEeccCCccccceeeecccc-CeEEEEecC--CCCCCCCCcee
Q 017296 32 ILFAGTTGGELRIWDTV-QHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD-GTVKCWDIE--NGGLSSNPSLT 105 (374)
Q Consensus 32 ~l~s~s~D~~v~vWd~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D-~~vrvwd~~--~~~~~~~~~~~ 105 (374)
++++++.|+.|++||+. +++ .+..+ .+ ...+..+++++ +++++++++.+ +.|++|++. +++.. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~sp--dg~~l~~~~~~~~~v~~~~~~~~~~~~~-----~ 76 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVV-DV--PGQVQPMVVSP--DKRYLYVGVRPEFRVLAYRIAPDDGALT-----F 76 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEE-EC--SSCCCCEEECT--TSSEEEEEETTTTEEEEEEECTTTCCEE-----E
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeE-ec--CCCCceEEECC--CCCEEEEeecCCCeEEEEEecCCCCcee-----e
Confidence 44555889999999985 332 22222 22 23455677776 56777777765 999999997 43210 0
Q ss_pred eeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCC---C
Q 017296 106 IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT---A 182 (374)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~---~ 182 (374)
+.. ...+. . +.. + .+ .++++++++++..++.|.+||+.. .
T Consensus 77 ~~~----------~~~~~-------~--------~~~-~----------~~-s~dg~~l~~~~~~~~~i~~~d~~~~~~~ 119 (343)
T 1ri6_A 77 AAE----------SALPG-------S--------LTH-I----------ST-DHQGQFVFVGSYNAGNVSVTRLEDGLPV 119 (343)
T ss_dssp EEE----------EECSS-------C--------CSE-E----------EE-CTTSSEEEEEETTTTEEEEEEEETTEEE
T ss_pred ccc----------cccCC-------C--------CcE-E----------EE-cCCCCEEEEEecCCCeEEEEECCCCccc
Confidence 000 00000 0 000 0 01 123355666666788999999953 3
Q ss_pred ceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEe-cCCcEEEEeccCCCCcee----eeec-CccCeE
Q 017296 183 ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-EDGSILVWDIRNPGIPLT----AMKV-HLEPVL 256 (374)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs-~dg~i~iwdl~~~~~~~~----~~~~-h~~~v~ 256 (374)
+....+.... ....+ .+.+ .+. .+++++ .++.|++||+...+.... .... ....+.
T Consensus 120 ~~~~~~~~~~-----------~~~~~---~~s~---dg~-~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
T 1ri6_A 120 GVVDVVEGLD-----------GCHSA---NISP---DNR-TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR 181 (343)
T ss_dssp EEEEEECCCT-----------TBCCC---EECT---TSS-EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEE
T ss_pred cccccccCCC-----------CceEE---EECC---CCC-EEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcc
Confidence 3333332111 01111 1222 222 355554 899999999975232211 2222 234788
Q ss_pred EEEEecCCCceEEE-ecCCeEEEEEcCCCCCeEEEEEeee---cC---CCCeEEEEECCCCCEEE-EEeCCCeEEEEEcc
Q 017296 257 CLSIDESCNGGISG-GADQKIVLYNLDHSTGSCVIKKEIN---LE---RPGISGTSIRPDSKIAA-TAGWDRRVRIYNYR 328 (374)
Q Consensus 257 ~~~~~~~~~~~~s~-s~D~~i~lwd~~~~~~~~~~~~~~~---~~---~~~v~~~~~sp~~~~l~-s~~~dg~v~iwd~~ 328 (374)
.+.|+|++..++.+ ..++.|.+|+++..++......... .. ...+..++|+|++++|+ +...++.|++||+.
T Consensus 182 ~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 182 HMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 89999999866554 4899999999975444332222221 11 22466899999998876 55579999999997
Q ss_pred --C--CeEEEEecccCCceEEEEEeCCCCEEEEEe-CCCcEEEecCC
Q 017296 329 --K--GSALAILKYHHATCNAVSFSSDCKLMASAS-EDSTVALWELY 370 (374)
Q Consensus 329 --~--~~~~~~~~~h~~~v~~v~~sp~~~~las~s-~D~~v~~W~~~ 370 (374)
+ .+.+..+..+.. +..++|+|+|++|+.++ .|+.|++|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 262 EDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 2 344555554544 88999999999888776 68999999664
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.88 E-value=1.8e-20 Score=174.50 Aligned_cols=282 Identities=11% Similarity=0.065 Sum_probs=179.9
Q ss_pred CCCceeEEEEeCCCC-EEEEec----CCC----cEEEEeC--cccceee--eeeeeeceeeeEEeccCCc----------
Q 017296 17 HRASVTDVCFHQTKP-ILFAGT----TGG----ELRIWDT--VQHRTVS--SSWVHSAAHGIVSVATGPS---------- 73 (374)
Q Consensus 17 H~~~V~~l~~~~~~~-~l~s~s----~D~----~v~vWd~--~~~~~~~--~~~~~~~~~~~~~~~~~~~---------- 73 (374)
+...|...+|.+.|. ++++|+ .|| +++|||+ .+++.+. .+.+|... +..+++.+.
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQW--LRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGG--HHHHHHHHHHHHHHHHHSS
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhH--HHHHHHHHHHHHHHHHcCC
Confidence 345788888988875 566876 567 8999999 8888763 35555432 333332210
Q ss_pred --cccceeeecccc------CeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceee
Q 017296 74 --IGLNKVISQGRD------GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVD 145 (374)
Q Consensus 74 --~~~~~l~s~~~D------~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (374)
..+.+++.++.+ ++|++||+..+.. ..+......... +
T Consensus 139 ~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~-----~~l~~~~~~v~~----------------------------~- 184 (415)
T 2hqs_A 139 KGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ-----FVVHRSPQPLMS----------------------------P- 184 (415)
T ss_dssp CCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC-----EEEEEESSCEEE----------------------------E-
T ss_pred CCcCCCEEEEEEecCCCCccceEEEEcCCCCCC-----EEEeCCCCccee----------------------------e-
Confidence 013456655543 7999999974321 111100000000 0
Q ss_pred cCCCCCCCCCCCCCCCceEEEcccCC--CeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceE
Q 017296 146 TDSLCDSKDDVPAEGPKYMAVAGEQL--SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVN 223 (374)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~d--~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (374)
.+.+ +++.+++++..+ ..|++||+++++... +... .. .... ..+.|+ +...
T Consensus 185 ---------~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~~----------~~--~~~~-~~~spd---g~~l 237 (415)
T 2hqs_A 185 ---------AWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQ-VASF----------PR--HNGA-PAFSPD---GSKL 237 (415)
T ss_dssp ---------EECT-TSSEEEEEECTTSSCEEEEEETTTCCEEE-EECC----------SS--CEEE-EEECTT---SSEE
T ss_pred ---------EEcC-CCCEEEEEEecCCCcEEEEEECCCCcEEE-eecC----------CC--cccC-EEEcCC---CCEE
Confidence 0112 234444444332 499999999987643 3211 01 1111 134443 3333
Q ss_pred EEEEecCCc--EEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEec-CC--eEEEEEcCCCCCeEEEEEeeecCC
Q 017296 224 VLAGYEDGS--ILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQ--KIVLYNLDHSTGSCVIKKEINLER 298 (374)
Q Consensus 224 ~~~gs~dg~--i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~-D~--~i~lwd~~~~~~~~~~~~~~~~~~ 298 (374)
+++++.++. |.+||++.. ....+..|...+.++.|+|++..++.++. ++ .|.+||++... .. .+..+.
T Consensus 238 a~~~~~~g~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~--~~---~l~~~~ 310 (415)
T 2hqs_A 238 AFALSKTGSLNLYVMDLASG--QIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA--PQ---RITWEG 310 (415)
T ss_dssp EEEECTTSSCEEEEEETTTC--CEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC--CE---ECCCSS
T ss_pred EEEEecCCCceEEEEECCCC--CEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC--EE---EEecCC
Confidence 446766655 999999753 24567788889999999999998888876 45 56666775432 11 223344
Q ss_pred CCeEEEEECCCCCEEEEEeCC---CeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCC---cEEEecCC
Q 017296 299 PGISGTSIRPDSKIAATAGWD---RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDS---TVALWELY 370 (374)
Q Consensus 299 ~~v~~~~~sp~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~---~v~~W~~~ 370 (374)
..+.+++|+||+++|+.++.+ ..|.+||+.+++.. .+..|. .+.+++|+|||++|++++.|+ .|++|++.
T Consensus 311 ~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 311 SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETT
T ss_pred CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC
Confidence 568889999999999888764 58999999888764 566565 899999999999999988887 79999875
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=4.7e-20 Score=184.15 Aligned_cols=294 Identities=10% Similarity=0.026 Sum_probs=181.4
Q ss_pred CCceeEEEEeCCCCEEEEecC-CC-----cEEEEeCcccceeeeeeeeece----------------------eeeEEec
Q 017296 18 RASVTDVCFHQTKPILFAGTT-GG-----ELRIWDTVQHRTVSSSWVHSAA----------------------HGIVSVA 69 (374)
Q Consensus 18 ~~~V~~l~~~~~~~~l~s~s~-D~-----~v~vWd~~~~~~~~~~~~~~~~----------------------~~~~~~~ 69 (374)
...|.+++|+|||++|++++. |+ +|++||+.+++....+..+... ..+..++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 457899999999999999998 88 8999999888765444333211 2356677
Q ss_pred cCCccccceeeeccccCeEEEEecCCC---CCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeec
Q 017296 70 TGPSIGLNKVISQGRDGTVKCWDIENG---GLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT 146 (374)
Q Consensus 70 ~~~~~~~~~l~s~~~D~~vrvwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (374)
+++ ++++|++++. ++|++||+.++ +... +........ .+
T Consensus 116 ~Sp--Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~-----l~~~~~~~~----------------------------~~-- 157 (741)
T 2ecf_A 116 WSP--DAQRLLFPLG-GELYLYDLKQEGKAAVRQ-----LTHGEGFAT----------------------------DA-- 157 (741)
T ss_dssp ECT--TSSEEEEEET-TEEEEEESSSCSTTSCCB-----CCCSSSCEE----------------------------EE--
T ss_pred ECC--CCCEEEEEeC-CcEEEEECCCCCcceEEE-----cccCCcccc----------------------------cc--
Confidence 877 6788887776 99999999876 3210 000000000 00
Q ss_pred CCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcC------CCCCcceeEEEeeecCCCCC
Q 017296 147 DSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFS------SKGRGMCMAVQAYLPSKSQG 220 (374)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 220 (374)
.+.++ +++++++. ++.|.+||+.+++..............+.. ...... . ..+.++ +
T Consensus 158 --------~~SPD-G~~la~~~--~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--~-~~~SpD---g 220 (741)
T 2ecf_A 158 --------KLSPK-GGFVSFIR--GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHT--G-YWWAPD---D 220 (741)
T ss_dssp --------EECTT-SSEEEEEE--TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCC--S-EEECTT---S
T ss_pred --------cCCCC-CCEEEEEe--CCcEEEEecCCCCEEEeccCCccceeccccceeeeecccccc--c-eEECCC---C
Confidence 01223 34444443 358999999987654322211000000000 000000 0 123332 2
Q ss_pred ceEEEEEecCC---------------------------------cEEEEeccC-CCCceeeee--cCccCeEEEEEecCC
Q 017296 221 FVNVLAGYEDG---------------------------------SILVWDIRN-PGIPLTAMK--VHLEPVLCLSIDESC 264 (374)
Q Consensus 221 ~~~~~~gs~dg---------------------------------~i~iwdl~~-~~~~~~~~~--~h~~~v~~~~~~~~~ 264 (374)
. .|+.++.|+ .|.+||+.. ... ..... .|...+..++| |++
T Consensus 221 ~-~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~-pDg 297 (741)
T 2ecf_A 221 S-AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT-QWIDLGKEQDIYLARVNW-RDP 297 (741)
T ss_dssp S-CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC-EEECCCSCSSEEEEEEEE-EET
T ss_pred C-EEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce-EEecCCCCcceEEEEEEe-CCC
Confidence 2 355555444 788889875 432 22221 47788999999 999
Q ss_pred CceEEEec-----CCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEcc-CCeEEEEecc
Q 017296 265 NGGISGGA-----DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYR-KGSALAILKY 338 (374)
Q Consensus 265 ~~~~s~s~-----D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~ 338 (374)
..++.++. +..|.+||++..................+..++|+||++++++++.||+++||.+. +++ ...+..
T Consensus 298 ~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~ 376 (741)
T 2ecf_A 298 QHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTH 376 (741)
T ss_dssp TEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCC
T ss_pred CEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeee
Confidence 98886653 67899999875443222211110000134578999999999999999999998775 455 777888
Q ss_pred cCCceEEE-EEeCCCCEEE-EEeCCC--cEEEecCC
Q 017296 339 HHATCNAV-SFSSDCKLMA-SASEDS--TVALWELY 370 (374)
Q Consensus 339 h~~~v~~v-~~sp~~~~la-s~s~D~--~v~~W~~~ 370 (374)
|...|..+ +|+|||+.|+ +++.|+ .++||++.
T Consensus 377 ~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 377 GNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp SSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred cceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 88888887 5999999765 555565 89999874
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=6.2e-19 Score=158.54 Aligned_cols=283 Identities=7% Similarity=0.034 Sum_probs=171.4
Q ss_pred EEEeCCCC-EEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeee-ccccCeEEEEecCCCCCCCC
Q 017296 24 VCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVIS-QGRDGTVKCWDIENGGLSSN 101 (374)
Q Consensus 24 l~~~~~~~-~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-~~~D~~vrvwd~~~~~~~~~ 101 (374)
..|.+++. ++++++.++.|.+||..+++.+..+..+. ... .+++++ ++++++. ...++.|.+||+.+++..
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~-~~~~s~--dg~~l~~~~~~~~~i~~~d~~~~~~~-- 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGY--DFV-DTAITS--DCSNVVVTSDFCQTLVQIETQLEPPK-- 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCC--CEE-EEEECS--SSCEEEEEESTTCEEEEEECSSSSCE--
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccC--Ccc-eEEEcC--CCCEEEEEeCCCCeEEEEECCCCcee--
Confidence 34665554 47788999999999999888766654332 223 677776 5565554 455899999999876420
Q ss_pred CceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCC--eEEEEec
Q 017296 102 PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS--EVEIWDL 179 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--~i~vWd~ 179 (374)
...+... . .+.... .+. +++++++++...++ .|.+||+
T Consensus 76 -~~~~~~~----------~----------~~~~~~------------------~~s-~dg~~l~~~~~~~~~~~i~v~d~ 115 (331)
T 3u4y_A 76 -VVAIQEG----------Q----------SSMADV------------------DIT-PDDQFAVTVTGLNHPFNMQSYSF 115 (331)
T ss_dssp -EEEEEEC----------S----------SCCCCE------------------EEC-TTSSEEEECCCSSSSCEEEEEET
T ss_pred -EEecccC----------C----------CCccce------------------EEC-CCCCEEEEecCCCCcccEEEEEC
Confidence 0000000 0 000000 011 22344443333324 8999999
Q ss_pred CCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCc-EEEEeccCCCCce---eeeecCccCe
Q 017296 180 NTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS-ILVWDIRNPGIPL---TAMKVHLEPV 255 (374)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~-i~iwdl~~~~~~~---~~~~~h~~~v 255 (374)
++++.+..+.... .... ..+.++ +...+++...++. |.+|++...+... ..........
T Consensus 116 ~~~~~~~~~~~~~-----------~~~~---~~~spd---g~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 178 (331)
T 3u4y_A 116 LKNKFISTIPIPY-----------DAVG---IAISPN---GNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRP 178 (331)
T ss_dssp TTTEEEEEEECCT-----------TEEE---EEECTT---SSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSE
T ss_pred CCCCeEEEEECCC-----------Cccc---eEECCC---CCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCc
Confidence 9988766654311 0111 123332 3334555677788 9999997533221 1111234567
Q ss_pred EEEEEecCCCceE-EEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEe-CCCeEEEEEccCCeE-
Q 017296 256 LCLSIDESCNGGI-SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG-WDRRVRIYNYRKGSA- 332 (374)
Q Consensus 256 ~~~~~~~~~~~~~-s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~v~iwd~~~~~~- 332 (374)
..+.|+|++..++ ++..++.|.+||++....... ...+.. ...+..++|+||+++++.++ .++.|.+||..+++.
T Consensus 179 ~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~ 256 (331)
T 3u4y_A 179 FNITFTPDGNFAFVANLIGNSIGILETQNPENITL-LNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLS 256 (331)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEE-EEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEE
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECCCCcccce-eeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCcee
Confidence 8999999998554 555789999999975543111 112222 24567899999999776554 578999999998876
Q ss_pred -EEEeccc----CC---ceEEEEEeCCCCEEEEE-eCCCcEEEecCCCC
Q 017296 333 -LAILKYH----HA---TCNAVSFSSDCKLMASA-SEDSTVALWELYPP 372 (374)
Q Consensus 333 -~~~~~~h----~~---~v~~v~~sp~~~~las~-s~D~~v~~W~~~~~ 372 (374)
+..+..+ .. ....++|+|||++|+.+ ..++.|++|++..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 257 FVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGK 305 (331)
T ss_dssp EEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSC
T ss_pred eecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCC
Confidence 4443322 22 23558999999987654 55679999999754
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.85 E-value=2.2e-19 Score=167.08 Aligned_cols=265 Identities=11% Similarity=0.041 Sum_probs=175.4
Q ss_pred EEeecCCCceeEEEEeC--------------CCCEEEEecCC------CcEEEEeCcccceeeeeeeeeceeeeEEeccC
Q 017296 12 AVLRGHRASVTDVCFHQ--------------TKPILFAGTTG------GELRIWDTVQHRTVSSSWVHSAAHGIVSVATG 71 (374)
Q Consensus 12 ~~l~gH~~~V~~l~~~~--------------~~~~l~s~s~D------~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (374)
..+.+|...++.+++++ .+..++.++.+ +.|++||.. +..+..+..|. ..+.+++|+
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~-g~~~~~l~~~~--~~v~~~~~S 187 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYD-GYNQFVVHRSP--QPLMSPAWS 187 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETT-SCSCEEEEEES--SCEEEEEEC
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCC-CCCCEEEeCCC--CcceeeEEc
Confidence 55889999999988875 15555555543 799999986 44555665564 357888888
Q ss_pred CccccceeeeccccC---eEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCC
Q 017296 72 PSIGLNKVISQGRDG---TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDS 148 (374)
Q Consensus 72 ~~~~~~~l~s~~~D~---~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (374)
+ +++++++++.|+ +|++||+.+++.. .+........ . +
T Consensus 188 p--dg~~la~~s~~~~~~~i~~~d~~tg~~~-----~l~~~~~~~~--------------------~--------~---- 228 (415)
T 2hqs_A 188 P--DGSKLAYVTFESGRSALVIQTLANGAVR-----QVASFPRHNG--------------------A--------P---- 228 (415)
T ss_dssp T--TSSEEEEEECTTSSCEEEEEETTTCCEE-----EEECCSSCEE--------------------E--------E----
T ss_pred C--CCCEEEEEEecCCCcEEEEEECCCCcEE-----EeecCCCccc--------------------C--------E----
Confidence 7 678899988775 9999999887421 1100000000 0 0
Q ss_pred CCCCCCCCCCCCCceEEEcccCC--CeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEE
Q 017296 149 LCDSKDDVPAEGPKYMAVAGEQL--SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLA 226 (374)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~d--~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (374)
.+.+ +++.++++++.+ ..|.+||+++++. ..+..+. ..... ..+.++ +. .++.
T Consensus 229 ------~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~------------~~~~~-~~~spd---g~-~l~~ 283 (415)
T 2hqs_A 229 ------AFSP-DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGR------------SNNTE-PTWFPD---SQ-NLAF 283 (415)
T ss_dssp ------EECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCS------------SCEEE-EEECTT---SS-EEEE
T ss_pred ------EEcC-CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCC------------Ccccc-eEECCC---CC-EEEE
Confidence 0112 334455455443 4599999998765 3332210 01111 134433 32 4666
Q ss_pred Eec-CC--cEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecC---CeEEEEEcCCCCCeEEEEEeeecCCCC
Q 017296 227 GYE-DG--SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD---QKIVLYNLDHSTGSCVIKKEINLERPG 300 (374)
Q Consensus 227 gs~-dg--~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D---~~i~lwd~~~~~~~~~~~~~~~~~~~~ 300 (374)
++. ++ .|.+||+... ....+..+...+.++.|+|++..++.++.+ ..|.+||++... .. .+..+. .
T Consensus 284 ~s~~~g~~~i~~~d~~~~--~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~--~~---~l~~~~-~ 355 (415)
T 2hqs_A 284 TSDQAGRPQVYKVNINGG--APQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG--VQ---VLSSTF-L 355 (415)
T ss_dssp EECTTSSCEEEEEETTSS--CCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC--EE---ECCCSS-S
T ss_pred EECCCCCcEEEEEECCCC--CEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC--EE---EecCCC-C
Confidence 554 55 5666787643 234455677789999999999988888764 589999997543 21 122232 6
Q ss_pred eEEEEECCCCCEEEEEeCCC---eEEEEEccCCeEEEEecccCCceEEEEEeCCC
Q 017296 301 ISGTSIRPDSKIAATAGWDR---RVRIYNYRKGSALAILKYHHATCNAVSFSSDC 352 (374)
Q Consensus 301 v~~~~~sp~~~~l~s~~~dg---~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~ 352 (374)
+.+++|+||+++|+.++.|+ .|.+||+. ++....+..|.+.|.+++|+|.-
T Consensus 356 ~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 356 DETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp CEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred cCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 88999999999999888877 79999986 56677889999999999999964
No 134
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=2.3e-17 Score=149.32 Aligned_cols=282 Identities=12% Similarity=0.145 Sum_probs=176.9
Q ss_pred cCCCceeEEEEeCCCCEEEEecC-------CCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccc-eeeeccccCe
Q 017296 16 GHRASVTDVCFHQTKPILFAGTT-------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLN-KVISQGRDGT 87 (374)
Q Consensus 16 gH~~~V~~l~~~~~~~~l~s~s~-------D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~D~~ 87 (374)
.....+..++|+|++++|++++. ++.|.+||..+++.+..+.... ....+++++ +++ .+++...+++
T Consensus 38 ~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~---~~~~~~~s~--dg~~l~v~~~~~~~ 112 (353)
T 3vgz_A 38 AVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL---KPFGATINN--TTQTLWFGNTVNSA 112 (353)
T ss_dssp EEESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS---CCCSEEEET--TTTEEEEEETTTTE
T ss_pred hhccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC---CcceEEECC--CCCEEEEEecCCCE
Confidence 45567889999999998887774 5689999999888766654322 234455665 455 4556677899
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|.+||+.+++... .+..... .. .....+. .+.. + .+.+++ +.++++
T Consensus 113 v~~~d~~~~~~~~----~~~~~~~-----------~~--~~~~~~~-----~~~~-~----------~~s~dg-~~l~~~ 158 (353)
T 3vgz_A 113 VTAIDAKTGEVKG----RLVLDDR-----------KR--TEEVRPL-----QPRE-L----------VADDAT-NTVYIS 158 (353)
T ss_dssp EEEEETTTCCEEE----EEESCCC-----------CC--CSSCCCC-----EEEE-E----------EEETTT-TEEEEE
T ss_pred EEEEeCCCCeeEE----EEecCCC-----------cc--ccccCCC-----CCce-E----------EECCCC-CEEEEE
Confidence 9999998874210 0000000 00 0000000 0000 0 011233 334444
Q ss_pred c-cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee
Q 017296 168 G-EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (374)
Q Consensus 168 ~-~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~ 246 (374)
+ ..++.|.+||+++++....+..... ....+ .+.++ +. .+++++.++.|.+||+.+. ....
T Consensus 159 ~~~~~~~i~~~d~~~~~~~~~~~~~~~--------~~~~~-----~~s~d---g~-~l~~~~~~~~i~~~d~~~~-~~~~ 220 (353)
T 3vgz_A 159 GIGKESVIWVVDGGNIKLKTAIQNTGK--------MSTGL-----ALDSE---GK-RLYTTNADGELITIDTADN-KILS 220 (353)
T ss_dssp EESSSCEEEEEETTTTEEEEEECCCCT--------TCCCC-----EEETT---TT-EEEEECTTSEEEEEETTTT-EEEE
T ss_pred ecCCCceEEEEcCCCCceEEEecCCCC--------ccceE-----EECCC---CC-EEEEEcCCCeEEEEECCCC-eEEE
Confidence 4 4578999999999987766642110 00111 12222 22 4777788999999999763 3343
Q ss_pred eeec----CccCeEEEEEecCCCceEEEec-CCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEe-CCC
Q 017296 247 AMKV----HLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAG-WDR 320 (374)
Q Consensus 247 ~~~~----h~~~v~~~~~~~~~~~~~s~s~-D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg 320 (374)
.+.. +...+..+++++++..++.++. ++.|.+||++..+ .. ..+.... ...++|+|++++++.++ .++
T Consensus 221 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~--~~--~~~~~~~--~~~~~~s~dg~~l~v~~~~~~ 294 (353)
T 3vgz_A 221 RKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN--IL--AKVAAPE--SLAVLFNPARNEAYVTHRQAG 294 (353)
T ss_dssp EEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC--EE--EEEECSS--CCCEEEETTTTEEEEEETTTT
T ss_pred EEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc--EE--EEEEcCC--CceEEECCCCCEEEEEECCCC
Confidence 3332 4556788999999887666554 5999999986543 22 1222222 25689999999665555 689
Q ss_pred eEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCC
Q 017296 321 RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED 361 (374)
Q Consensus 321 ~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D 361 (374)
+|.+||..+++.+..+..+ ..+.+++|+|||++|+.+..+
T Consensus 295 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 295 KVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEEEEEEC
T ss_pred eEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEEEEEcc
Confidence 9999999999988877644 478999999999966655444
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.84 E-value=5.2e-19 Score=155.52 Aligned_cols=244 Identities=11% Similarity=0.009 Sum_probs=163.9
Q ss_pred CeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcc-cceeeeeeeeeceeeeEEeccCCccccceeeecc--ccC
Q 017296 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG--RDG 86 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~--~D~ 86 (374)
....+..|...|.+++|+|+|++|++++ ++.|++||+.+ ++.......+. ...+..+.+++ +++.+++++ .++
T Consensus 33 ~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~sp--dg~~l~~~~~~~~~ 108 (297)
T 2ojh_A 33 KMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFA-TICNNDHGISP--DGALYAISDKVEFG 108 (297)
T ss_dssp EEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTC-CCBCSCCEECT--TSSEEEEEECTTTS
T ss_pred ceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccc-cccccceEECC--CCCEEEEEEeCCCC
Confidence 3456778999999999999999999987 78999999988 76544433331 12355667776 567787777 445
Q ss_pred eEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEE
Q 017296 87 TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (374)
Q Consensus 87 ~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (374)
..++|.++..... ...+
T Consensus 109 ~~~l~~~~~~~~~---~~~~------------------------------------------------------------ 125 (297)
T 2ojh_A 109 KSAIYLLPSTGGT---PRLM------------------------------------------------------------ 125 (297)
T ss_dssp SCEEEEEETTCCC---CEEC------------------------------------------------------------
T ss_pred cceEEEEECCCCc---eEEe------------------------------------------------------------
Confidence 6666666421000 0000
Q ss_pred cccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee
Q 017296 167 AGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (374)
Q Consensus 167 ~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~ 246 (374)
.... .+ .. ..+.+ .+...++++..++.+++|++........
T Consensus 126 ~~~~--~~---------------------------------~~-~~~sp---dg~~l~~~~~~~~~~~l~~~~~~~~~~~ 166 (297)
T 2ojh_A 126 TKNL--PS---------------------------------YW-HGWSP---DGKSFTYCGIRDQVFDIYSMDIDSGVET 166 (297)
T ss_dssp CSSS--SE---------------------------------EE-EEECT---TSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred ecCC--Cc---------------------------------cc-eEECC---CCCEEEEEECCCCceEEEEEECCCCcce
Confidence 0000 00 00 01111 1222234677788889998754333455
Q ss_pred eeecCccCeEEEEEecCCCceEEEe-cCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC------
Q 017296 247 AMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD------ 319 (374)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~~~~s~s-~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d------ 319 (374)
.+..|...+.++.++|++..++.++ .|+.+++|+++...... ..+..+...+..++|+|++++|+.++.+
T Consensus 167 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 167 RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV---ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDH 243 (297)
T ss_dssp ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE---EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSC
T ss_pred EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc---EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcc
Confidence 5667788899999999998777665 59999999987433322 2233344567889999999999888766
Q ss_pred -----CeEEEEEccCCeE--EEEecccCCceEEEEEeCCCCEEEEEeCCC
Q 017296 320 -----RRVRIYNYRKGSA--LAILKYHHATCNAVSFSSDCKLMASASEDS 362 (374)
Q Consensus 320 -----g~v~iwd~~~~~~--~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 362 (374)
+.|.+||+.+++. +..+.+|...+..++|+|||++|++++.|.
T Consensus 244 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp CSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999988754 444557888999999999999998887654
No 136
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=1.9e-18 Score=178.96 Aligned_cols=340 Identities=9% Similarity=0.079 Sum_probs=198.3
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCC------CcEEEEeCcccceeeeeeeeecee-----eeEEeccCCccccc
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTG------GELRIWDTVQHRTVSSSWVHSAAH-----GIVSVATGPSIGLN 77 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D------~~v~vWd~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 77 (374)
.....|.+|...|.+++|||||++|+.++.+ ..|.+||+.+++ ...+..|.... .+..++|++ +++
T Consensus 43 g~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~Sp--Dg~ 119 (1045)
T 1k32_A 43 GSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDP--DGN 119 (1045)
T ss_dssp CCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECT--TCC
T ss_pred CcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCC--CCE
Confidence 3567888999999999999999999987643 479999998775 34444454221 126788887 556
Q ss_pred eeeecccc------CeEEEEecCCCCCCC---CCceeeeecce--------------------eeeeeeeecc-------
Q 017296 78 KVISQGRD------GTVKCWDIENGGLSS---NPSLTIKTNSY--------------------HFCKLSLVKE------- 121 (374)
Q Consensus 78 ~l~s~~~D------~~vrvwd~~~~~~~~---~~~~~~~~~~~--------------------~~~~~~~~~~------- 121 (374)
.+++++.| ..|.+|++.++.... .+...+..... ....+.+...
T Consensus 120 ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l 199 (1045)
T 1k32_A 120 LIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKI 199 (1045)
T ss_dssp EEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEE
T ss_pred EEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEEC
Confidence 67777654 457778876653210 00000000000 0000000000
Q ss_pred -------------ccccccccC--CCCccccccc--CceeecCCCC-CCCCCCCCCCCceEEEcccCCCeEEEEecCCCc
Q 017296 122 -------------PYANAKQAN--EPKDCYEREV--GETVDTDSLC-DSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAE 183 (374)
Q Consensus 122 -------------~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~ 183 (374)
+........ .....+..+. +......... .....+.+++ +.++++ .++.|.+||+...+
T Consensus 200 ~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG-~~la~~--~~~~i~~~d~~~~~ 276 (1045)
T 1k32_A 200 VDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDG-RRILFS--KGGSIYIFNPDTEK 276 (1045)
T ss_dssp ECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESS-SCEEEE--ETTEEEEECTTTCC
T ss_pred cCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCC-CEEEEE--eCCEEEEecCCceE
Confidence 000000000 0000111111 0000000000 0000112233 344443 36899999995443
Q ss_pred eeEEeccCccCCCCCcC-CCCCcceeEEEeee-cCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCcc-CeEEEEE
Q 017296 184 RCTRLHQNSCGGSPNFS-SKGRGMCMAVQAYL-PSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLE-PVLCLSI 260 (374)
Q Consensus 184 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~-~v~~~~~ 260 (374)
+..+..........+. ....... ..+. ++ +. .++.++ ++.|.+|++... ....+..|.. .+..+.|
T Consensus 277 -l~~l~~~~~~~~~~~~~~~~~v~~---~~~S~pd---G~-~la~~~-~~~i~~~~~~~~--~~~~~~~~~~~~~~~~~~ 345 (1045)
T 1k32_A 277 -IEKIEIGDLESPEDRIISIPSKFA---EDFSPLD---GD-LIAFVS-RGQAFIQDVSGT--YVLKVPEPLRIRYVRRGG 345 (1045)
T ss_dssp -EEECCCCCCCBCCSEEEECGGGGE---EEEEECG---GG-CEEEEE-TTEEEEECTTSS--BEEECSCCSCEEEEEECS
T ss_pred -eeeeccCcccccccccccccccce---eeecCCC---CC-EEEEEE-cCEEEEEcCCCC--ceEEccCCCcceEEeeeE
Confidence 3344321100000000 0000111 1244 33 22 355555 889999998642 2344666777 8899999
Q ss_pred ecCCCceEEEecCCeEE-EEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEeccc
Q 017296 261 DESCNGGISGGADQKIV-LYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH 339 (374)
Q Consensus 261 ~~~~~~~~s~s~D~~i~-lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h 339 (374)
+ ++..++.++.++.+. +||++... .. .+..+...+..++||||+++|++++.++.|++||+.+++....+.+|
T Consensus 346 s-dg~~l~~~s~~~~l~~~~d~~~~~--~~---~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~ 419 (1045)
T 1k32_A 346 D-TKVAFIHGTREGDFLGIYDYRTGK--AE---KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSR 419 (1045)
T ss_dssp S-SEEEEEEEETTEEEEEEEETTTCC--EE---ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS
T ss_pred c-CCCeEEEEECCCceEEEEECCCCC--ce---EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCC
Confidence 9 888889988888888 88986532 11 12244567899999999999999999999999999999887777789
Q ss_pred CCceEEEEEeCCCCEEEEEeCCC----------cEEEecCCC
Q 017296 340 HATCNAVSFSSDCKLMASASEDS----------TVALWELYP 371 (374)
Q Consensus 340 ~~~v~~v~~sp~~~~las~s~D~----------~v~~W~~~~ 371 (374)
...+.+++|+|||++||+++.++ .|++|++..
T Consensus 420 ~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~ 461 (1045)
T 1k32_A 420 EAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG 461 (1045)
T ss_dssp SSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT
T ss_pred CCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC
Confidence 99999999999999999887654 999999864
No 137
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=4.2e-19 Score=172.50 Aligned_cols=271 Identities=12% Similarity=0.054 Sum_probs=176.4
Q ss_pred CCCceeEEEEeCCCCEEEEecC-CCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccc---cCeEEEEe
Q 017296 17 HRASVTDVCFHQTKPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGR---DGTVKCWD 92 (374)
Q Consensus 17 H~~~V~~l~~~~~~~~l~s~s~-D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~---D~~vrvwd 92 (374)
+..+|++++|+|||+.|++++. |++++||++.+++.. .+..|. ...+..++|++ + +.+++++. +...++|.
T Consensus 20 ~~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~-~lt~~~-~~~~~~~~~sp--d-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 20 IAVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV-KLNREP-INSVLDPHYGV--G-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HHSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE-ECCSSC-CSEECEECTTC--S-EEEEEEECSTTSCCEEEEE
T ss_pred hccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE-eeeccc-ccccccccCCC--C-eEEEEeccCCCCcceEEEE
Confidence 3678999999999999998887 999999998655543 333232 12466778886 4 56666554 56677877
Q ss_pred cCC--CCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccC
Q 017296 93 IEN--GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ 170 (374)
Q Consensus 93 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (374)
+.. ... ...+.....+. .. .+.++++..+++++..
T Consensus 95 ~~~~~~g~----~~~l~~~~~~~-----------------------------~~----------~~s~dg~~~~~~s~~~ 131 (582)
T 3o4h_A 95 VNTSRPGE----EQRLEAVKPMR-----------------------------IL----------SGVDTGEAVVFTGATE 131 (582)
T ss_dssp EETTSTTC----CEECTTSCSBE-----------------------------EE----------EEEECSSCEEEEEECS
T ss_pred EeccCCCc----cccccCCCCce-----------------------------ee----------eeCCCCCeEEEEecCC
Confidence 654 210 00000000000 00 0112333445555555
Q ss_pred CCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecC----CcEEEEeccCCCCcee
Q 017296 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED----GSILVWDIRNPGIPLT 246 (374)
Q Consensus 171 d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d----g~i~iwdl~~~~~~~~ 246 (374)
++ +.+||+.+++........ . . . ..+.|+ +. .++.++.+ +.|++||+.... ..
T Consensus 132 ~~-~~l~d~~~g~~~~l~~~~-----------~--~--~-~~~spD---G~-~la~~~~~~~~~~~i~~~d~~~g~--~~ 188 (582)
T 3o4h_A 132 DR-VALYALDGGGLRELARLP-----------G--F--G-FVSDIR---GD-LIAGLGFFGGGRVSLFTSNLSSGG--LR 188 (582)
T ss_dssp SC-EEEEEEETTEEEEEEEES-----------S--C--E-EEEEEE---TT-EEEEEEEEETTEEEEEEEETTTCC--CE
T ss_pred CC-ceEEEccCCcEEEeecCC-----------C--c--e-EEECCC---CC-EEEEEEEcCCCCeEEEEEcCCCCC--ce
Confidence 54 459999988654333211 0 0 1 123332 33 46666666 789999987533 44
Q ss_pred eeecCccCeEEEEEecCCCceEEEecCC--eEEEEEcCCCCCeEEEEEeeecCCCCeEEEE--------ECCCCCEEEEE
Q 017296 247 AMKVHLEPVLCLSIDESCNGGISGGADQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTS--------IRPDSKIAATA 316 (374)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~~~~s~s~D~--~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~--------~sp~~~~l~s~ 316 (374)
.+..|...+..++|+|++..+++++.++ .|.+||+++... . ....+...+..++ |+|||++++++
T Consensus 189 ~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~ 263 (582)
T 3o4h_A 189 VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSV--E---DLELPSKDFSSYRPTAITWLGYLPDGRLAVVA 263 (582)
T ss_dssp EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCE--E---ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEE
T ss_pred EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcE--E---EccCCCcChhhhhhccccceeEcCCCcEEEEE
Confidence 6778888899999999999999888888 899999875432 2 2233333455555 99999999999
Q ss_pred eCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCc---EEEecC
Q 017296 317 GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDST---VALWEL 369 (374)
Q Consensus 317 ~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~---v~~W~~ 369 (374)
+.|+++++|++ ++... .+.+.|.+++|+ +++++++++.+.+ +.+|+.
T Consensus 264 ~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d~ 313 (582)
T 3o4h_A 264 RREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLPS 313 (582)
T ss_dssp EETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEETT
T ss_pred EcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEcC
Confidence 99999999999 66554 345678999999 9999999887755 556654
No 138
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=3.1e-17 Score=148.55 Aligned_cols=202 Identities=7% Similarity=0.095 Sum_probs=127.9
Q ss_pred CceEEEcccCCCeEEEEecCC-Cc--eeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEe
Q 017296 161 PKYMAVAGEQLSEVEIWDLNT-AE--RCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (374)
Q Consensus 161 ~~~~~~~~~~d~~i~vWd~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwd 237 (374)
++++++++..++.+++||+.. +. .+..+..... .+. .......... ..+.+ .+. .+++...++.|.+||
T Consensus 97 g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~--~p~-~~~~~~~~~~-~~~sp---dg~-l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 97 RQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGH--GPR-PEQDGSHIHY-TDLTP---DNR-LAVIDLGSDKVYVYN 168 (347)
T ss_dssp TTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCC--CSS-TTCSSCCEEE-EEECT---TSC-EEEEETTTTEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCC--CCC-ccccCCCceE-EEECC---CCc-EEEEeCCCCEEEEEE
Confidence 355666666788999999963 32 2222211100 000 0000011111 12333 344 567777889999999
Q ss_pred ccCCCCce--eeeecC-ccCeEEEEEecCCCceEE-EecCCeEEEEEcCCCCCeEEEEEeeecCC------CCeEEEEEC
Q 017296 238 IRNPGIPL--TAMKVH-LEPVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLER------PGISGTSIR 307 (374)
Q Consensus 238 l~~~~~~~--~~~~~h-~~~v~~~~~~~~~~~~~s-~s~D~~i~lwd~~~~~~~~~~~~~~~~~~------~~v~~~~~s 307 (374)
+...+... ..+..+ ......++|+|++..++. +..++.|.+|+++..++............ ..+..++|+
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 97323211 112222 236778999999985554 56789999999986555543333332221 347889999
Q ss_pred CCCCEE-EEEeCCCeEEEEEccC---CeEEEEecccCCceEEEEEeCCCCEEEEEeCC-CcEEEecCC
Q 017296 308 PDSKIA-ATAGWDRRVRIYNYRK---GSALAILKYHHATCNAVSFSSDCKLMASASED-STVALWELY 370 (374)
Q Consensus 308 p~~~~l-~s~~~dg~v~iwd~~~---~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D-~~v~~W~~~ 370 (374)
|||++| ++...+++|.+|++.. .+.+..+..+...+..++|+|||++|++++.+ +.|.+|+++
T Consensus 249 pdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 249 HDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 999977 5666789999999962 25566666667778999999999988887654 899999664
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.82 E-value=8e-18 Score=151.17 Aligned_cols=272 Identities=12% Similarity=0.106 Sum_probs=166.8
Q ss_pred CEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccce-eeeccccCeEEEEecCCCCCCCCCceeeeec
Q 017296 31 PILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNK-VISQGRDGTVKCWDIENGGLSSNPSLTIKTN 109 (374)
Q Consensus 31 ~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~ 109 (374)
.+|++++.+++|.+||..+++.+..+...........+++++ ++++ +++++.++.|.+||+.+++... .+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~~~~~v~~~d~~~~~~~~----~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAP--GGRIAYATVNKSESLVKIDLVTGETLG----RIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECT--TSSEEEEEETTTTEEEEEETTTCCEEE----EEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcC--CCCEEEEEeCCCCeEEEEECCCCCeEe----eEEcC
Confidence 478999999999999999888766554221000245566776 4544 4677778999999998764210 00000
Q ss_pred ceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEccc-----------CCCeEEEEe
Q 017296 110 SYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE-----------QLSEVEIWD 178 (374)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~d~~i~vWd 178 (374)
. +... ...+.. + .+.++ +++++++.. .++.|.+||
T Consensus 76 ~-----------~~~~-----------~~~~~~-~----------~~s~d-g~~l~~~~~~~~~~~~~~~~~~~~i~v~d 121 (337)
T 1pby_B 76 T-----------PEER-----------VKSLFG-A----------ALSPD-GKTLAIYESPVRLELTHFEVQPTRVALYD 121 (337)
T ss_dssp B-----------TTEE-----------EECTTC-E----------EECTT-SSEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred C-----------cccc-----------cccccc-e----------EECCC-CCEEEEEecccccccccccccCceEEEEE
Confidence 0 0000 000000 0 01122 233444321 358999999
Q ss_pred cCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCc--cCeE
Q 017296 179 LNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL--EPVL 256 (374)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~--~~v~ 256 (374)
+.+++....+..... ... + .+.++ +. .++++ ++.|.+||++.. .....+..+. .++
T Consensus 122 ~~~~~~~~~~~~~~~---------~~~--~---~~s~d---g~-~l~~~--~~~i~~~d~~~~-~~~~~~~~~~~~~~~- 179 (337)
T 1pby_B 122 AETLSRRKAFEAPRQ---------ITM--L---AWARD---GS-KLYGL--GRDLHVMDPEAG-TLVEDKPIQSWEAET- 179 (337)
T ss_dssp TTTTEEEEEEECCSS---------CCC--E---EECTT---SS-CEEEE--SSSEEEEETTTT-EEEEEECSTTTTTTT-
T ss_pred CCCCcEEEEEeCCCC---------cce--e---EECCC---CC-EEEEe--CCeEEEEECCCC-cEeeeeeccccCCCc-
Confidence 998877655542110 011 1 13222 22 35555 689999999753 3333333332 232
Q ss_pred EEEEecCCCceEEEec-CC-----------------------eEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCE
Q 017296 257 CLSIDESCNGGISGGA-DQ-----------------------KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 312 (374)
Q Consensus 257 ~~~~~~~~~~~~s~s~-D~-----------------------~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 312 (374)
.+++++..++..+. ++ .|.+||++... .. ......+...+.+++|+||+++
T Consensus 180 --~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--~~-~~~~~~~~~~~~~~~~s~dg~~ 254 (337)
T 1pby_B 180 --YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE--MA-MREVRIMDVFYFSTAVNPAKTR 254 (337)
T ss_dssp --BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC--EE-EEEEEECSSCEEEEEECTTSSE
T ss_pred --eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCC--ce-EeecCCCCCceeeEEECCCCCE
Confidence 45666655443332 22 46889886543 22 2223334456788999999999
Q ss_pred EEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 313 AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 313 l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
++++ ++.|.+||+.+++.+..+.. ...+.+++|+|||++|++++.|+.|++|++...
T Consensus 255 l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 255 AFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp EEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred EEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 9887 79999999999988877764 356789999999999988899999999998654
No 140
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.81 E-value=8.7e-18 Score=173.94 Aligned_cols=295 Identities=11% Similarity=0.085 Sum_probs=191.3
Q ss_pred CeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcc-cceeeeeeeeeceeeeEEeccCCccccceeeeccccCeE
Q 017296 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQ-HRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTV 88 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~v 88 (374)
....+.+|...+.+++|+++ .++++++.|++++||.... +.....+..|. .+...++++ ++++++.+ .|+.|
T Consensus 195 ~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~---~~~~~~~Sp--DG~~la~~-~~~~i 267 (1045)
T 1k32_A 195 AFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT---DYYPRHLNT--DGRRILFS-KGGSI 267 (1045)
T ss_dssp EEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC---SSCEEEEEE--SSSCEEEE-ETTEE
T ss_pred CeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC---CcceeeEcC--CCCEEEEE-eCCEE
Confidence 34566899999999999988 7788889999999998643 33333333332 233446665 66777776 58999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
.+||+..... . ....+.. .. ... .......+ ....+.+++++.+++++
T Consensus 268 ~~~d~~~~~l------~--~l~~~~~--------~~------~~~---~~~~~~~v-------~~~~~S~pdG~~la~~~ 315 (1045)
T 1k32_A 268 YIFNPDTEKI------E--KIEIGDL--------ES------PED---RIISIPSK-------FAEDFSPLDGDLIAFVS 315 (1045)
T ss_dssp EEECTTTCCE------E--ECCCCCC--------CB------CCS---EEEECGGG-------GEEEEEECGGGCEEEEE
T ss_pred EEecCCceEe------e--eeccCcc--------cc------ccc---cccccccc-------ceeeecCCCCCEEEEEE
Confidence 9999843211 0 0000000 00 000 00000000 00011202223444444
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEE-EEeccCCCCceee
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSIL-VWDIRNPGIPLTA 247 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~-iwdl~~~~~~~~~ 247 (374)
++.+.+|++.+++... +..+ . ........+ + ....++.++.++.|. +||+... . ...
T Consensus 316 --~~~i~~~~~~~~~~~~-~~~~----------~--~~~~~~~~~----s-dg~~l~~~s~~~~l~~~~d~~~~-~-~~~ 373 (1045)
T 1k32_A 316 --RGQAFIQDVSGTYVLK-VPEP----------L--RIRYVRRGG----D-TKVAFIHGTREGDFLGIYDYRTG-K-AEK 373 (1045)
T ss_dssp --TTEEEEECTTSSBEEE-CSCC----------S--CEEEEEECS----S-SEEEEEEEETTEEEEEEEETTTC-C-EEE
T ss_pred --cCEEEEEcCCCCceEE-ccCC----------C--cceEEeeeE----c-CCCeEEEEECCCceEEEEECCCC-C-ceE
Confidence 5789999998776432 2111 0 000011112 1 223577777788888 8898643 2 334
Q ss_pred eecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCC-------
Q 017296 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR------- 320 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg------- 320 (374)
+.+|...+..++|+|++..+++++.++.|++||++...... ....+...+.+++|||||++|++++.++
T Consensus 374 l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~----~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~ 449 (1045)
T 1k32_A 374 FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV----IERSREAMITDFTISDNSRFIAYGFPLKHGETDGY 449 (1045)
T ss_dssp CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE----EEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSC
T ss_pred ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEE----eccCCCCCccceEECCCCCeEEEEecCccccccCC
Confidence 45788899999999999999999999999999997543221 2224556678999999999998887654
Q ss_pred ---eEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 321 ---RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 321 ---~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
.|++||+.+++ ...+..|...+..++|+|||++|++++.++..++|+..
T Consensus 450 ~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 450 VMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp CEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSS
T ss_pred CCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchh
Confidence 99999998887 66778888889999999999999999999998888753
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=6.8e-18 Score=167.60 Aligned_cols=304 Identities=9% Similarity=0.027 Sum_probs=166.0
Q ss_pred CCCCCCCCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCccccee-eeeeeeece---------------eeeE
Q 017296 3 KRPPPPDPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTV-SSSWVHSAA---------------HGIV 66 (374)
Q Consensus 3 ~~~~~~~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~-~~~~~~~~~---------------~~~~ 66 (374)
+.++..+....|..+. +..+.|. |..+++++.|+ | +||+.+++.+ ..+..|... ..+.
T Consensus 12 ~~~~~~~~~~~~~~~~--~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~ 85 (706)
T 2z3z_A 12 SLMPGGKEFYNFYPEY--VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSF 85 (706)
T ss_dssp ------------------CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCE
T ss_pred cccCCccccccccccc--CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCce
Confidence 3445555555666553 5667888 66777777777 8 9999988763 444333211 3477
Q ss_pred EeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeec
Q 017296 67 SVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDT 146 (374)
Q Consensus 67 ~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (374)
.+++++ + ..++.+ .|+++++||+.+++.. .+ .. ... ...
T Consensus 86 ~~~~sp--d-~~~~~~-~~~~i~~~d~~~~~~~-----~l------------~~-~~~-------~~~------------ 124 (706)
T 2z3z_A 86 RTLDAG--R-GLVVLF-TQGGLVGFDMLARKVT-----YL------------FD-TNE-------ETA------------ 124 (706)
T ss_dssp EEEETT--T-TEEEEE-ETTEEEEEETTTTEEE-----EE------------EC-CTT-------CCT------------
T ss_pred eEEECC--C-CeEEEE-ECCEEEEEECCCCceE-----Ec------------cC-Ccc-------ccc------------
Confidence 888887 4 344433 4599999999876310 00 00 000 000
Q ss_pred CCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCC-----CceeEEeccCccCC---CCCcCC-CCCcceeEEEeeecCC
Q 017296 147 DSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT-----AERCTRLHQNSCGG---SPNFSS-KGRGMCMAVQAYLPSK 217 (374)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~-----~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~ 217 (374)
...+.++ ++.++++ .++.|.+||+.+ ++............ ...... ..... . ..+.|+
T Consensus 125 ------~~~~Spd-G~~la~~--~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~--~-~~~SpD- 191 (706)
T 2z3z_A 125 ------SLDFSPV-GDRVAYV--RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEK--G-TFWSPK- 191 (706)
T ss_dssp ------TCEECTT-SSEEEEE--ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCC--S-EEECTT-
T ss_pred ------CCcCCCC-CCEEEEE--ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCc--e-EEECCC-
Confidence 0011233 3445543 468999999998 76433222111000 000000 00000 0 123332
Q ss_pred CCCceEEEEEe---------------------------------cCCcEEEEeccCCCCceeee--ecCccCeEEEEEec
Q 017296 218 SQGFVNVLAGY---------------------------------EDGSILVWDIRNPGIPLTAM--KVHLEPVLCLSIDE 262 (374)
Q Consensus 218 ~~~~~~~~~gs---------------------------------~dg~i~iwdl~~~~~~~~~~--~~h~~~v~~~~~~~ 262 (374)
+. .|+.++ .+..|.+||+.... ..... ..|...+..+.|+|
T Consensus 192 --g~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~-~~~~~~~~~~~~~~~~~~~sp 267 (706)
T 2z3z_A 192 --GS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGK-TVYLQTGEPKEKFLTNLSWSP 267 (706)
T ss_dssp --SS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTE-EEECCCCSCTTCEEEEEEECT
T ss_pred --CC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCc-eEeeccCCCCceeEeeEEEEC
Confidence 22 355554 44779999997532 22222 24667899999999
Q ss_pred CCCceEEEecCC-----eEEEEEcCCCCCeEEEEEeee-cCCCCeEEEEECC--CCCEEEEEeCCCeEEEEEcc-CCeEE
Q 017296 263 SCNGGISGGADQ-----KIVLYNLDHSTGSCVIKKEIN-LERPGISGTSIRP--DSKIAATAGWDRRVRIYNYR-KGSAL 333 (374)
Q Consensus 263 ~~~~~~s~s~D~-----~i~lwd~~~~~~~~~~~~~~~-~~~~~v~~~~~sp--~~~~l~s~~~dg~v~iwd~~-~~~~~ 333 (374)
++..+++++.|+ .|.+||++.......+..... .....+..++|+| |++++++++.|++++||++. +++.+
T Consensus 268 dg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~ 347 (706)
T 2z3z_A 268 DENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLI 347 (706)
T ss_dssp TSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEE
T ss_pred CCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEE
Confidence 999888888775 999999875411111111111 0111235689999 99999999999999999886 67777
Q ss_pred EEecccCCceEE-EEEeCCCCEEEEEe-CCC----cEEEecCC
Q 017296 334 AILKYHHATCNA-VSFSSDCKLMASAS-EDS----TVALWELY 370 (374)
Q Consensus 334 ~~~~~h~~~v~~-v~~sp~~~~las~s-~D~----~v~~W~~~ 370 (374)
..+..|...+.. ++|+|||+.|+.++ .++ .|..|++.
T Consensus 348 ~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 348 RQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp EECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred EecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 788888877876 79999999776554 444 45555543
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.80 E-value=2.5e-18 Score=171.16 Aligned_cols=297 Identities=8% Similarity=0.016 Sum_probs=170.2
Q ss_pred CceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeece-eeeEEeccCCccccceeeecccc---------CeE
Q 017296 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIVSVATGPSIGLNKVISQGRD---------GTV 88 (374)
Q Consensus 19 ~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~~~D---------~~v 88 (374)
..+.+++|+|+|+++++ +.|++|++||..+++....+..|... ..+..+++++ |+++|++++.| +.+
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~Sp--Dg~~l~~~~~~~~~~~~~~~~~i 93 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISP--DREYALFSYNVEPIYQHSYTGYY 93 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECT--TSSEEEEEESCCCCSSSCCCSEE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECC--CCCEEEEEecCccceeecceeeE
Confidence 34678999999998777 78999999999988765554433210 1366788887 67888888664 788
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
.+||+.+++.. .+.....+ . . . .....+.+++ +.++.++
T Consensus 94 ~~~d~~~~~~~-----~l~~~~~~----------~---------~---------~-------~~~~~~SPdG-~~la~~~ 132 (723)
T 1xfd_A 94 VLSKIPHGDPQ-----SLDPPEVS----------N---------A---------K-------LQYAGWGPKG-QQLIFIF 132 (723)
T ss_dssp EEEESSSCCCE-----ECCCTTCC----------S---------C---------C-------CSBCCBCSST-TCEEEEE
T ss_pred EEEECCCCceE-----eccCCccc----------c---------c---------c-------ccccEECCCC-CEEEEEE
Confidence 89999887421 00000000 0 0 0 0000122333 4444444
Q ss_pred cCCCeEEEEecCCCceeEEeccCccCC-CCCcCC-----CCCcceeEEEeeecCCCCCceEEEEEecC------------
Q 017296 169 EQLSEVEIWDLNTAERCTRLHQNSCGG-SPNFSS-----KGRGMCMAVQAYLPSKSQGFVNVLAGYED------------ 230 (374)
Q Consensus 169 ~~d~~i~vWd~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~gs~d------------ 230 (374)
. +.|.+||+.+++............ ..+... ...... ....+.|+ +. .|+.++.|
T Consensus 133 ~--~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~-~~~~~SpD---g~-~la~~~~~~~~~~~~~~~~~ 205 (723)
T 1xfd_A 133 E--NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH-IAHWWSPD---GT-RLAYAAINDSRVPIMELPTY 205 (723)
T ss_dssp T--TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS-EEEEECTT---SS-EEEEEEEECTTSCEEEECCC
T ss_pred C--CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc-ceEEECCC---CC-EEEEEEECCCccceEEeecc
Confidence 3 689999999887544332211000 000000 000000 00123332 22 34444433
Q ss_pred ----------------------CcEEEEeccCCCCceeeeecC------ccCeEEEEEecCCCceEEEec----CCeEEE
Q 017296 231 ----------------------GSILVWDIRNPGIPLTAMKVH------LEPVLCLSIDESCNGGISGGA----DQKIVL 278 (374)
Q Consensus 231 ----------------------g~i~iwdl~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~s~s~----D~~i~l 278 (374)
..|++||+.... ....+..+ ...+..+.|+|++..+++.+. +..|.+
T Consensus 206 ~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~-~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 284 (723)
T 1xfd_A 206 TGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT-HDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTL 284 (723)
T ss_dssp SSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC-CCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEE
T ss_pred CCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc-eeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEE
Confidence 279999997543 22344433 567899999999987766543 368999
Q ss_pred EEcCCCCCeEEEEEeeecCCCCe----EEEEECCCCCEEEE--EeCCC------eEEEEE-ccCCe--EEEEecccCCce
Q 017296 279 YNLDHSTGSCVIKKEINLERPGI----SGTSIRPDSKIAAT--AGWDR------RVRIYN-YRKGS--ALAILKYHHATC 343 (374)
Q Consensus 279 wd~~~~~~~~~~~~~~~~~~~~v----~~~~~sp~~~~l~s--~~~dg------~v~iwd-~~~~~--~~~~~~~h~~~v 343 (374)
||++.......... .+...+ ..++|+|||+.|+. +..++ .|.+|| ...++ +...+..+...+
T Consensus 285 ~d~~~g~~~~~~~~---~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~ 361 (723)
T 1xfd_A 285 CDATTGVCTKKHED---ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDV 361 (723)
T ss_dssp EETTTCCEEEEEEE---ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCE
T ss_pred EeCCCCcceEEEEe---ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEE
Confidence 99875432222111 111222 36899999997764 55677 466666 33333 144454444444
Q ss_pred EE-EEEeCCCCEEEEEeCC---CcEEEecCC
Q 017296 344 NA-VSFSSDCKLMASASED---STVALWELY 370 (374)
Q Consensus 344 ~~-v~~sp~~~~las~s~D---~~v~~W~~~ 370 (374)
.. ++|+|||+.|+..+.+ +.++||++.
T Consensus 362 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 362 TKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp EEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred EeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 44 6999999998766555 889999874
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.80 E-value=8.5e-17 Score=144.80 Aligned_cols=276 Identities=10% Similarity=0.088 Sum_probs=162.5
Q ss_pred ecCCCceeEEEEeCCCCEEEEecCC-CcEEEEeCc--ccce--eeeeeeeeceeeeEEeccCCccccceeee-ccccCeE
Q 017296 15 RGHRASVTDVCFHQTKPILFAGTTG-GELRIWDTV--QHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVIS-QGRDGTV 88 (374)
Q Consensus 15 ~gH~~~V~~l~~~~~~~~l~s~s~D-~~v~vWd~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-~~~D~~v 88 (374)
..|...+.+++|+|+|++|++++.+ +.|++|++. +++. +..+..+ .....+++++ +++.++. +..++.|
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~--dg~~l~~~~~~~~~i 108 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP---GSLTHISTDH--QGQFVFVGSYNAGNV 108 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS---SCCSEEEECT--TSSEEEEEETTTTEE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC---CCCcEEEEcC--CCCEEEEEecCCCeE
Confidence 4688899999999999988888776 999999987 4442 2232221 2455667776 5566654 4568999
Q ss_pred EEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc
Q 017296 89 KCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG 168 (374)
Q Consensus 89 rvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (374)
++||+..+.. ...+.. ... ...... ..+ .++++++++++
T Consensus 109 ~~~d~~~~~~----~~~~~~----------~~~--------~~~~~~------------------~~~-s~dg~~l~~~~ 147 (343)
T 1ri6_A 109 SVTRLEDGLP----VGVVDV----------VEG--------LDGCHS------------------ANI-SPDNRTLWVPA 147 (343)
T ss_dssp EEEEEETTEE----EEEEEE----------ECC--------CTTBCC------------------CEE-CTTSSEEEEEE
T ss_pred EEEECCCCcc----cccccc----------ccC--------CCCceE------------------EEE-CCCCCEEEEec
Confidence 9999953210 000000 000 000000 001 12334556666
Q ss_pred cCCCeEEEEecCC-CceeE----EeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC
Q 017296 169 EQLSEVEIWDLNT-AERCT----RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (374)
Q Consensus 169 ~~d~~i~vWd~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~ 243 (374)
..++.|++||+.+ ++... .+... ....... ..+.+ .+...++++..++.|++||+.....
T Consensus 148 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~p---dg~~l~~~~~~~~~i~~~~~~~~~g 212 (343)
T 1ri6_A 148 LKQDRICLFTVSDDGHLVAQDPAEVTTV---------EGAGPRH---MVFHP---NEQYAYCVNELNSSVDVWELKDPHG 212 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEEEECS---------TTCCEEE---EEECT---TSSEEEEEETTTTEEEEEESSCTTS
T ss_pred CCCCEEEEEEecCCCceeeecccccccC---------CCCCcce---EEECC---CCCEEEEEeCCCCEEEEEEecCCCC
Confidence 5678999999987 54322 11110 0001111 12333 2332345566899999999953211
Q ss_pred c---eeeee----cC--ccCeEEEEEecCCCceE-EEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEE
Q 017296 244 P---LTAMK----VH--LEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIA 313 (374)
Q Consensus 244 ~---~~~~~----~h--~~~v~~~~~~~~~~~~~-s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 313 (374)
. ..... ++ ...+..++|++++..++ +++.|+.|.+||++..++.......+..+. .+..++|+|++++|
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l 291 (343)
T 1ri6_A 213 NIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTET-QPRGFNVDHSGKYL 291 (343)
T ss_dssp CCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSS-SCCCEEECTTSSEE
T ss_pred cEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCC-ccceEEECCCCCEE
Confidence 1 11121 11 23566899999987776 555899999999974344333333333333 37889999999988
Q ss_pred EEEe-CCCeEEEEEcc--CCe--EEEEecccCCceEEEEEeCCCC
Q 017296 314 ATAG-WDRRVRIYNYR--KGS--ALAILKYHHATCNAVSFSSDCK 353 (374)
Q Consensus 314 ~s~~-~dg~v~iwd~~--~~~--~~~~~~~h~~~v~~v~~sp~~~ 353 (374)
++++ .++.|.+|++. +++ .+..+.. .....+++|.|+.+
T Consensus 292 ~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 292 IAAGQKSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEG 335 (343)
T ss_dssp EEECTTTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC-
T ss_pred EEecCCCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccC
Confidence 8777 68999999554 553 3444443 24566788887654
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.79 E-value=1.1e-17 Score=156.51 Aligned_cols=118 Identities=14% Similarity=0.028 Sum_probs=93.1
Q ss_pred eecCccCeEEEEEecC-CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q 017296 248 MKVHLEPVLCLSIDES-CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 326 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~-~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd 326 (374)
+.+|..+|.+++|+|+ +..+++++.||+|++||++.. ... .....|...+.+++|+|++++|++|+.||+|++||
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~--~~~--~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd 220 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET--VKV--CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYL 220 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS--EEE--EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC--cce--eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEc
Confidence 4568899999999987 677899999999999999754 222 12233556799999999999999999999999999
Q ss_pred ccCCeEEEEecccC-------CceEEEEEeCCCCEEEE-EeCCCc------EEEecCC
Q 017296 327 YRKGSALAILKYHH-------ATCNAVSFSSDCKLMAS-ASEDST------VALWELY 370 (374)
Q Consensus 327 ~~~~~~~~~~~~h~-------~~v~~v~~sp~~~~las-~s~D~~------v~~W~~~ 370 (374)
.+ ++....+..|. ..|.+++|++++.++++ ++.||. +++|++.
T Consensus 221 ~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~ 277 (434)
T 2oit_A 221 PT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLP 277 (434)
T ss_dssp TT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECC
T ss_pred cC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEec
Confidence 97 55555555443 38999999999987754 445543 8899985
No 145
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.78 E-value=1.3e-15 Score=138.70 Aligned_cols=202 Identities=10% Similarity=0.086 Sum_probs=123.6
Q ss_pred ceEEEcccCCCeEEEEecCCCceeEEeccCc-cCC-CCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEecc
Q 017296 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNS-CGG-SPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIR 239 (374)
Q Consensus 162 ~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~ 239 (374)
++++++...++.+.+|++.+...+..+.... ... .+............ ..+.+ .+...+++...++.|++|++.
T Consensus 110 ~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~sp---dg~~l~~~~~~~~~v~v~~~~ 185 (361)
T 3scy_A 110 KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHC-VRITP---DGKYLLADDLGTDQIHKFNIN 185 (361)
T ss_dssp SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEE-EEECT---TSSEEEEEETTTTEEEEEEEC
T ss_pred CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceE-EEECC---CCCEEEEEeCCCCEEEEEEEc
Confidence 4566666678899999997644322221100 000 00000000001111 12333 343345556678999999987
Q ss_pred CCCC----c-e-------eeeecCccCeEEEEEecCCCceEEEe-cCCeEEEEEcCCCCCeEEEEEeee---cCCCCeEE
Q 017296 240 NPGI----P-L-------TAMKVHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEIN---LERPGISG 303 (374)
Q Consensus 240 ~~~~----~-~-------~~~~~h~~~v~~~~~~~~~~~~~s~s-~D~~i~lwd~~~~~~~~~~~~~~~---~~~~~v~~ 303 (374)
.... . + .....+......+.|+|++..++.++ .++.|.+|+++. +......... .+......
T Consensus 186 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~--g~~~~~~~~~~~~~~~~~~~~ 263 (361)
T 3scy_A 186 PNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD--GMLDEIQTVAADTVNAQGSGD 263 (361)
T ss_dssp TTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET--TEEEEEEEEESCSSCCCCEEE
T ss_pred CCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC--CceEEeEEEecCCCCCCCccc
Confidence 5331 1 1 11122345678899999998777666 689999999973 3332222222 12245678
Q ss_pred EEECCCCCEEEEEeCC--CeEEEEEcc--CCe--EEEEecccCCceEEEEEeCCCCEEEEEe-CCCcEEEecCC
Q 017296 304 TSIRPDSKIAATAGWD--RRVRIYNYR--KGS--ALAILKYHHATCNAVSFSSDCKLMASAS-EDSTVALWELY 370 (374)
Q Consensus 304 ~~~sp~~~~l~s~~~d--g~v~iwd~~--~~~--~~~~~~~h~~~v~~v~~sp~~~~las~s-~D~~v~~W~~~ 370 (374)
++|+||+++|+.+..+ ++|.+|++. +++ .+..+.. ...+..++|+|||++|++++ .++.|.+|.++
T Consensus 264 i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 264 IHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 9999999998666654 899999995 344 3444444 45778999999999888776 67999998664
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.76 E-value=2.6e-16 Score=138.16 Aligned_cols=145 Identities=16% Similarity=0.115 Sum_probs=104.9
Q ss_pred EEEEe--cCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceE-EEecCCeEEEEEcCCCCCeEEEEEeeecCCCC
Q 017296 224 VLAGY--EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTGSCVIKKEINLERPG 300 (374)
Q Consensus 224 ~~~gs--~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~ 300 (374)
++.++ .++.+++|.+.........+..+ ..+..+.++|++..++ +++.|+.+++|+++..++... .+..+...
T Consensus 99 l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~ 174 (297)
T 2ojh_A 99 YAISDKVEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET---RLTHGEGR 174 (297)
T ss_dssp EEEEECTTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE---ECCCSSSC
T ss_pred EEEEEeCCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCcce---EcccCCCc
Confidence 44444 33456666554322223334333 3588899999998777 788999999999765443322 23334557
Q ss_pred eEEEEECCCCCEEEEEe-CCCeEEEEEcc-CCeEEEEecccCCceEEEEEeCCCCEEEEEeCC-----------CcEEEe
Q 017296 301 ISGTSIRPDSKIAATAG-WDRRVRIYNYR-KGSALAILKYHHATCNAVSFSSDCKLMASASED-----------STVALW 367 (374)
Q Consensus 301 v~~~~~sp~~~~l~s~~-~dg~v~iwd~~-~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D-----------~~v~~W 367 (374)
+..++|+|++++|+.++ .|+.+++|++. .++....+..|...+..++|+|+|++|++++.| +.|++|
T Consensus 175 ~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~ 254 (297)
T 2ojh_A 175 NDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLM 254 (297)
T ss_dssp EEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEE
T ss_pred cccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEE
Confidence 89999999999887666 59999999986 566677788888899999999999999988766 569999
Q ss_pred cCCCC
Q 017296 368 ELYPP 372 (374)
Q Consensus 368 ~~~~~ 372 (374)
++...
T Consensus 255 d~~~~ 259 (297)
T 2ojh_A 255 DMDGG 259 (297)
T ss_dssp ETTSC
T ss_pred ecCCC
Confidence 98643
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.76 E-value=1.1e-16 Score=159.81 Aligned_cols=295 Identities=11% Similarity=0.030 Sum_probs=171.8
Q ss_pred ceeEEEEeCCCCEEEEecCCCcEEEEeCcccc--eeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCC
Q 017296 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHR--TVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (374)
Q Consensus 20 ~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~ 97 (374)
.|.+++|+|||++|++++. +.|.+||+.+++ .+..+..|. ..+..++|++ ++++++.++ ++.|++||+.+++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~--~~~~~~~~SP--DG~~la~~~-~~~i~~~d~~~g~ 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGE--GFATDAKLSP--KGGFVSFIR-GRNLWVIDLASGR 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSS--SCEEEEEECT--TSSEEEEEE-TTEEEEEETTTTE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCC--cccccccCCC--CCCEEEEEe-CCcEEEEecCCCC
Confidence 4899999999999998886 999999998772 333443342 3467788887 678888776 4699999998763
Q ss_pred CCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCC------
Q 017296 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL------ 171 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------ 171 (374)
... +... +...+ . .+........+... .....+.+++ ++++++....
T Consensus 184 ~~~-----~~~~--~~~~~--~---------~g~~~~v~~~~~~~--------~~~~~~SpDg-~~l~~~~~d~~~~~~~ 236 (741)
T 2ecf_A 184 QMQ-----LTAD--GSTTI--G---------NGIAEFVADEEMDR--------HTGYWWAPDD-SAIAYARIDESPVPVQ 236 (741)
T ss_dssp EEE-----CCCC--CCSSE--E---------ESCCCHHHHHHSCC--------CCSEEECTTS-SCEEEEEEECTTSCEE
T ss_pred EEE-----eccC--Cccce--e---------ccccceeeeecccc--------ccceEECCCC-CEEEEEEEcCCCCceE
Confidence 210 0000 00000 0 00000000000000 0000111222 2333322211
Q ss_pred --------------------------CeEEEEecCC-CceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEE
Q 017296 172 --------------------------SEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 224 (374)
Q Consensus 172 --------------------------~~i~vWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (374)
..|.+||+.+ ++........ ...... ....+ ++ +. .+
T Consensus 237 ~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~----------~~~~~~-~~~~~-pD---g~-~l 300 (741)
T 2ecf_A 237 KRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGK----------EQDIYL-ARVNW-RD---PQ-HL 300 (741)
T ss_dssp EEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCS----------CSSEEE-EEEEE-EE---TT-EE
T ss_pred ecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCC----------CcceEE-EEEEe-CC---CC-EE
Confidence 1788889988 7643222110 001111 11234 43 32 34
Q ss_pred EEEe-----cCCcEEEEeccCCCCceeeeecCcc----CeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeee
Q 017296 225 LAGY-----EDGSILVWDIRNPGIPLTAMKVHLE----PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN 295 (374)
Q Consensus 225 ~~gs-----~dg~i~iwdl~~~~~~~~~~~~h~~----~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~ 295 (374)
+.++ .+..|.+||+.+. .....+..+.. .+..+.|++++..+++++.|+.++||.++.... ...+.
T Consensus 301 ~~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~----~~~l~ 375 (741)
T 2ecf_A 301 SFQRQSRDQKKLDLVEVTLASN-QQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK----AAALT 375 (741)
T ss_dssp EEEEEETTSSEEEEEEEETTTC-CEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC----EEESC
T ss_pred EEEEecccCCeEEEEEEECCCC-ceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC----eeeee
Confidence 4333 3578999999764 33444444433 456889999998788889999999998764322 12334
Q ss_pred cCCCCeEEE-EECCCCCEEE-EEeCCC--eEEEEEccC-CeEEEEecccCCceEEEEEeCCCCEEEEEeCC----CcEEE
Q 017296 296 LERPGISGT-SIRPDSKIAA-TAGWDR--RVRIYNYRK-GSALAILKYHHATCNAVSFSSDCKLMASASED----STVAL 366 (374)
Q Consensus 296 ~~~~~v~~~-~~sp~~~~l~-s~~~dg--~v~iwd~~~-~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D----~~v~~ 366 (374)
.+...+..+ .|+|+++.|+ +++.++ +++||++.. ++....+.. ...+.+++|+|||++|+....+ ..+.+
T Consensus 376 ~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l 454 (741)
T 2ecf_A 376 HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIEL 454 (741)
T ss_dssp CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEE
Confidence 445567776 5999998775 555555 899999864 555666664 6678899999999988765433 35677
Q ss_pred ecC
Q 017296 367 WEL 369 (374)
Q Consensus 367 W~~ 369 (374)
|+.
T Consensus 455 ~~~ 457 (741)
T 2ecf_A 455 FRA 457 (741)
T ss_dssp EET
T ss_pred EEc
Confidence 764
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.76 E-value=1.8e-16 Score=157.33 Aligned_cols=296 Identities=11% Similarity=0.047 Sum_probs=170.0
Q ss_pred CceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCC---
Q 017296 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN--- 95 (374)
Q Consensus 19 ~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~--- 95 (374)
..|.+++|+|+ ..++.+ .|+++++||+.+++.... ..+. ..+..+++++ ++++++. +.|+.|++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l-~~~~--~~~~~~~~Sp--dG~~la~-~~~~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYL-FDTN--EETASLDFSP--VGDRVAY-VRNHNLYIARGGKLGE 153 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEE-ECCT--TCCTTCEECT--TSSEEEE-EETTEEEEEECBCTTS
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEc-cCCc--ccccCCcCCC--CCCEEEE-EECCeEEEEecCcccc
Confidence 67999999999 554443 359999999988765332 2222 2355667777 6778887 4789999999987
Q ss_pred --CCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcc-----
Q 017296 96 --GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAG----- 168 (374)
Q Consensus 96 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 168 (374)
++.... ........ . .+.. ...-+... .....+.+ +++++++++
T Consensus 154 ~~g~~~~~----~~~~~~~~----------~----~g~~--~~~ee~~~--------~~~~~~Sp-Dg~~la~~~~d~~~ 204 (706)
T 2z3z_A 154 GMSRAIAV----TIDGTETL----------V----YGQA--VHQREFGI--------EKGTFWSP-KGSCLAFYRMDQSM 204 (706)
T ss_dssp CCCCCEES----CSCCBTTE----------E----ESSC--CGGGCTTC--------CCSEEECT-TSSEEEEEEEECTT
T ss_pred cCCCcEEe----ccCCCCCe----------E----cccc--hhhhhcCC--------CceEEECC-CCCEEEEEEECCCC
Confidence 642100 00000000 0 0000 00000000 00000112 223333332
Q ss_pred ---------------------------cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCc
Q 017296 169 ---------------------------EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGF 221 (374)
Q Consensus 169 ---------------------------~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (374)
..+..|.+||+.+++........ .. ... .....+.++ +.
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--------~~--~~~-~~~~~~spd---g~ 270 (706)
T 2z3z_A 205 VKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE--------PK--EKF-LTNLSWSPD---EN 270 (706)
T ss_dssp SCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS--------CT--TCE-EEEEEECTT---SS
T ss_pred CceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC--------CC--cee-EeeEEEECC---CC
Confidence 13468999999988643221100 00 011 111234443 22
Q ss_pred eEEEEEecCC-----cEEEEeccCCCCceeeee-cCc---cCeEEEEEec--CCCceEEEecCCeEEEEEcCCCCCeEEE
Q 017296 222 VNVLAGYEDG-----SILVWDIRNPGIPLTAMK-VHL---EPVLCLSIDE--SCNGGISGGADQKIVLYNLDHSTGSCVI 290 (374)
Q Consensus 222 ~~~~~gs~dg-----~i~iwdl~~~~~~~~~~~-~h~---~~v~~~~~~~--~~~~~~s~s~D~~i~lwd~~~~~~~~~~ 290 (374)
.+++++.++ .|.+||+.+......... .+. ..+..+.|+| ++..+++++.|+.+++|.++.... ..
T Consensus 271 -~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~-~~- 347 (706)
T 2z3z_A 271 -ILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGR-LI- 347 (706)
T ss_dssp -EEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSC-EE-
T ss_pred -EEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCC-EE-
Confidence 466666664 899999976422222221 122 2346788999 888888899999999998863222 11
Q ss_pred EEeeecCCCCeEE-EEECCCCCEEEEEeC-CC----eEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCC---
Q 017296 291 KKEINLERPGISG-TSIRPDSKIAATAGW-DR----RVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED--- 361 (374)
Q Consensus 291 ~~~~~~~~~~v~~-~~~sp~~~~l~s~~~-dg----~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D--- 361 (374)
..+..+...+.. ++|+|+++.|+.++. ++ .|..||+.+++ ...+. |...+.+++|+|||++|+.+..+
T Consensus 348 -~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~ 424 (706)
T 2z3z_A 348 -RQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTV 424 (706)
T ss_dssp -EECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSC
T ss_pred -EecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCC
Confidence 223334445666 799999998765554 44 66667776665 44444 77789999999999988776443
Q ss_pred -CcEEEecCCC
Q 017296 362 -STVALWELYP 371 (374)
Q Consensus 362 -~~v~~W~~~~ 371 (374)
+.|++|++..
T Consensus 425 p~~i~l~d~~~ 435 (706)
T 2z3z_A 425 PRKVTVTNIGK 435 (706)
T ss_dssp SCEEEEEESSS
T ss_pred CcEEEEEECCC
Confidence 4599999754
No 149
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.75 E-value=3.7e-15 Score=135.65 Aligned_cols=285 Identities=9% Similarity=0.084 Sum_probs=158.1
Q ss_pred CCCceeEEEEeCCCCEEEEecCC----CcEEEEeCcc--cce--eeeeeeeeceeeeEEeccCCccccceeee-ccccCe
Q 017296 17 HRASVTDVCFHQTKPILFAGTTG----GELRIWDTVQ--HRT--VSSSWVHSAAHGIVSVATGPSIGLNKVIS-QGRDGT 87 (374)
Q Consensus 17 H~~~V~~l~~~~~~~~l~s~s~D----~~v~vWd~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~s-~~~D~~ 87 (374)
|......|+|+|+|++|++++.+ +.|.+|++.. ++. +.....+ ......+++ +++.+++ ...+++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~--~~~p~~~~~----dg~~l~~~~~~~~~ 121 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM--GADPCYLTT----NGKNIVTANYSGGS 121 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS--SSCEEEEEE----CSSEEEEEETTTTE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC--CCCcEEEEE----CCCEEEEEECCCCE
Confidence 77788889999999999999886 7999998764 332 2222111 112333344 3455554 447899
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|.+|++..+........... . . .. .+.. .......+. ...+ .+++++++++
T Consensus 122 v~~~~~~~~g~~~~~~~~~~-~---------~--g~-------~~~~--~~~~~~~~~-------~~~~-spdg~~l~~~ 172 (361)
T 3scy_A 122 ITVFPIGQDGALLPASDVIE-F---------K--GS-------GPDK--ERQTMPHLH-------CVRI-TPDGKYLLAD 172 (361)
T ss_dssp EEEEEBCTTSCBCSCSEEEE-C---------C--CC-------CSCT--TTCSSCCEE-------EEEE-CTTSSEEEEE
T ss_pred EEEEEeCCCCcCcccceeEE-c---------c--CC-------CCCc--cccCCCcce-------EEEE-CCCCCEEEEE
Confidence 99999975432111100000 0 0 00 0000 000000000 0011 2334556666
Q ss_pred ccCCCeEEEEecCCCce------eEEe---ccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEec
Q 017296 168 GEQLSEVEIWDLNTAER------CTRL---HQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDI 238 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl 238 (374)
...++.|++|++..... +... .... ........ ...|.++ +...+++...++.|.+||+
T Consensus 173 ~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~~~~---~~~~spd---g~~l~v~~~~~~~v~v~~~ 240 (361)
T 3scy_A 173 DLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK------VAPGSGPR---HLIFNSD---GKFAYLINEIGGTVIAFRY 240 (361)
T ss_dssp ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE------CCTTCCEE---EEEECTT---SSEEEEEETTTCEEEEEEE
T ss_pred eCCCCEEEEEEEcCCCCcccccceeeccccccee------cCCCCCCe---EEEEcCC---CCEEEEEcCCCCeEEEEEe
Confidence 66678999998875432 2111 0000 00000011 1124332 3323344447899999999
Q ss_pred cCCCC-ceeee---ecCccCeEEEEEecCCCceEEEec--CCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCE
Q 017296 239 RNPGI-PLTAM---KVHLEPVLCLSIDESCNGGISGGA--DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKI 312 (374)
Q Consensus 239 ~~~~~-~~~~~---~~h~~~v~~~~~~~~~~~~~s~s~--D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 312 (374)
..... .+..+ ..+......+.|+|++..++.+.. +++|.+|+++..++.......... ...+..++|+||+++
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~ 319 (361)
T 3scy_A 241 ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKY 319 (361)
T ss_dssp ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCE
T ss_pred cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCE
Confidence 74211 11212 223455689999999998866555 589999999754554433333333 345778999999998
Q ss_pred EEEEe-CCCeEEEEEc--cCCeEEEEe-cccCCceEEEEEe
Q 017296 313 AATAG-WDRRVRIYNY--RKGSALAIL-KYHHATCNAVSFS 349 (374)
Q Consensus 313 l~s~~-~dg~v~iwd~--~~~~~~~~~-~~h~~~v~~v~~s 349 (374)
|++++ .++.|.+|++ .+++..... ..+...+.||+|.
T Consensus 320 l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 320 LLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp EEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 88877 6799999755 456644332 2244678899886
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=9.2e-16 Score=138.44 Aligned_cols=281 Identities=10% Similarity=0.050 Sum_probs=156.8
Q ss_pred EEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccce-eeeccccCeEEEEecCCCCCCCC
Q 017296 23 DVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNK-VISQGRDGTVKCWDIENGGLSSN 101 (374)
Q Consensus 23 ~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~~~D~~vrvwd~~~~~~~~~ 101 (374)
.+++++++.++++++.+++|.+||..+++.+..+..+. ......+++++ +++. +++...+++|.+||+.+++...
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~~~s~--dg~~~~v~~~~~~~i~~~d~~t~~~~~- 79 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPD-KFGPGTAMMAP--DNRTAYVLNNHYGDIYGIDLDTCKNTF- 79 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSS-CCSSCEEEECT--TSSEEEEEETTTTEEEEEETTTTEEEE-
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCC-CCCCceeEECC--CCCEEEEEeCCCCcEEEEeCCCCcEEE-
Confidence 45788889999999999999999999888766654332 01244566666 4554 4566788999999998763210
Q ss_pred CceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccC-----------
Q 017296 102 PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ----------- 170 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 170 (374)
.+.... .+... ...+.. ..+. +++++++++...
T Consensus 80 ---~~~~~~----------~~~~~-----------~~~~~~-----------~~~s-pdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 80 ---HANLSS----------VPGEV-----------GRSMYS-----------FAIS-PDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp ---EEESCC----------STTEE-----------EECSSC-----------EEEC-TTSSEEEEEEEEEEECSSCEEEC
T ss_pred ---EEEccc----------ccccc-----------cccccc-----------eEEC-CCCCEEEEEcccccccccccccC
Confidence 000000 00000 000000 0011 223444444432
Q ss_pred CCeEEEEecCCCceeE---EeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 171 LSEVEIWDLNTAERCT---RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 171 d~~i~vWd~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
++.|.+||+++++... ..... ....++ .+.+ .+. ++++ ++.|.+||+++. .....
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~-----------~~~~~~---~~s~---dg~--l~~~--~~~i~~~d~~~~-~~~~~ 181 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMP-----------RQVYLM---RAAD---DGS--LYVA--GPDIYKMDVKTG-KYTVA 181 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECC-----------SSCCCE---EECT---TSC--EEEE--SSSEEEECTTTC-CEEEE
T ss_pred CCeEEEEECCCccccceeeeccCC-----------Ccccce---eECC---CCc--EEEc--cCcEEEEeCCCC-ceecc
Confidence 4799999998854322 22111 011111 1322 233 3444 344999999753 33333
Q ss_pred eecCc--c----------------------CeEEEEEecCCCceE-EEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 248 MKVHL--E----------------------PVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 248 ~~~h~--~----------------------~v~~~~~~~~~~~~~-s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
+..+. . ....+.+.+++.... .......+..+|....+ ... ...........
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~ 258 (349)
T 1jmx_B 182 LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGK--THT-QEFADLTELYF 258 (349)
T ss_dssp ECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCC--EEE-EEEEECSSCEE
T ss_pred ccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCc--EEe-cccccCCCcce
Confidence 33221 0 122233332211000 00001112223333221 111 11112334578
Q ss_pred EEEECC-CCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 303 GTSIRP-DSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 303 ~~~~sp-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
.++|+| ++++++++ ++.|.+||+.+++.+..+.. ...+.+++|+|||++|++++.|+.|++||...
T Consensus 259 ~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 259 TGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred eeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 899999 99999887 89999999999998877763 34578899999999888888999999999864
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.74 E-value=1.7e-15 Score=135.89 Aligned_cols=269 Identities=9% Similarity=0.056 Sum_probs=160.9
Q ss_pred CCeEEee-cCCC-ceeEEEEeCCCCEE-EEecCCCcEEEEeCcccceeeeeeeee---ceeeeEEeccCCccccceeeec
Q 017296 9 DPVAVLR-GHRA-SVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHS---AAHGIVSVATGPSIGLNKVISQ 82 (374)
Q Consensus 9 ~~~~~l~-gH~~-~V~~l~~~~~~~~l-~s~s~D~~v~vWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~s~ 82 (374)
+.+..+. ++.. .+..++|+|+|+.+ ++++.++.|.+||+.+++.+..+.... .......+++++ ++++++++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--dg~~l~~~ 99 (337)
T 1pby_B 22 AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSP--DGKTLAIY 99 (337)
T ss_dssp EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECT--TSSEEEEE
T ss_pred cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECC--CCCEEEEE
Confidence 3444444 3322 47899999999765 567778999999998887765544211 011344566666 56677766
Q ss_pred c------------ccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCC
Q 017296 83 G------------RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC 150 (374)
Q Consensus 83 ~------------~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (374)
+ .++.|++||+.+++... .+.. ... ....
T Consensus 100 ~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~----~~~~----------~~~-----------~~~~-------------- 140 (337)
T 1pby_B 100 ESPVRLELTHFEVQPTRVALYDAETLSRRK----AFEA----------PRQ-----------ITML-------------- 140 (337)
T ss_dssp EEEEEECSSCEEECCCEEEEEETTTTEEEE----EEEC----------CSS-----------CCCE--------------
T ss_pred ecccccccccccccCceEEEEECCCCcEEE----EEeC----------CCC-----------ccee--------------
Confidence 4 57999999997653110 0000 000 0000
Q ss_pred CCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCce---EEEEE
Q 017296 151 DSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV---NVLAG 227 (374)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g 227 (374)
.+.+++ ++++++ ++.|.+||+++++....+..........+++.+..+.. .. ..+.. ....+
T Consensus 141 ----~~s~dg-~~l~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~------~~-~~~~~~~~~~~~~ 205 (337)
T 1pby_B 141 ----AWARDG-SKLYGL---GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWN------QH-ESSGVMATPFYTA 205 (337)
T ss_dssp ----EECTTS-SCEEEE---SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCC------CC-TTTTEEEEEEEEE
T ss_pred ----EECCCC-CEEEEe---CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEee------ec-cCCCceeeeeecc
Confidence 011223 334444 46899999999887666543321111122222221110 00 00000 01112
Q ss_pred ecCC----------cEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecC
Q 017296 228 YEDG----------SILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE 297 (374)
Q Consensus 228 s~dg----------~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 297 (374)
..++ .|.+||+++.......+..+...+..+.+++++..++++ ++.|.+||++.. +.. ..+...
T Consensus 206 ~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~--~~~--~~~~~~ 279 (337)
T 1pby_B 206 RKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKN--ASI--KRVPLP 279 (337)
T ss_dssp BTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTT--EEE--EEEECS
T ss_pred ccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCC--cCc--ceecCC
Confidence 2222 689999976433223344566678899999999888777 799999998643 222 122222
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccC
Q 017296 298 RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH 340 (374)
Q Consensus 298 ~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~ 340 (374)
..+.+++|+|++++|++++.++.|++||+.+++.+..+..+.
T Consensus 280 -~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 280 -HSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp -SCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred -CceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 357789999999999888999999999999999888776553
No 152
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.74 E-value=2.8e-15 Score=134.52 Aligned_cols=190 Identities=8% Similarity=0.044 Sum_probs=125.2
Q ss_pred ceEEEcccCCCeEEEEecCCCce-eEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecC-C--cEEEEe
Q 017296 162 KYMAVAGEQLSEVEIWDLNTAER-CTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED-G--SILVWD 237 (374)
Q Consensus 162 ~~~~~~~~~d~~i~vWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d-g--~i~iwd 237 (374)
+++++++..++.|.+||+.+++. ...+...... .. .+ .+.+ .+. .++++..+ + .|.+||
T Consensus 52 ~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---------~~-~~---~~s~---dg~-~l~~~~~~~~~~~i~v~d 114 (331)
T 3u4y_A 52 SNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSS---------MA-DV---DITP---DDQ-FAVTVTGLNHPFNMQSYS 114 (331)
T ss_dssp CEEEEEESTTCEEEEEECSSSSCEEEEEEECSSC---------CC-CE---EECT---TSS-EEEECCCSSSSCEEEEEE
T ss_pred CEEEEEeCCCCeEEEEECCCCceeEEecccCCCC---------cc-ce---EECC---CCC-EEEEecCCCCcccEEEEE
Confidence 45666666678999999999886 4444332110 00 01 1222 222 35555444 3 899999
Q ss_pred ccCCCCceeeeecCccCeEEEEEecCCCceEEE-ecCCe-EEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEE-
Q 017296 238 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISG-GADQK-IVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAA- 314 (374)
Q Consensus 238 l~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~-s~D~~-i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~- 314 (374)
++. ......+.. ......+.|+|++..++.+ ..++. |.+|+++.....................++|+|++++++
T Consensus 115 ~~~-~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v 192 (331)
T 3u4y_A 115 FLK-NKFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFV 192 (331)
T ss_dssp TTT-TEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEE
T ss_pred CCC-CCeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEE
Confidence 975 334444443 4456899999998766554 55578 999999743222111111112334578999999999655
Q ss_pred EEeCCCeEEEEEccCCeE---EEEecccCCceEEEEEeCCCCEEEE-EeCCCcEEEecCCC
Q 017296 315 TAGWDRRVRIYNYRKGSA---LAILKYHHATCNAVSFSSDCKLMAS-ASEDSTVALWELYP 371 (374)
Q Consensus 315 s~~~dg~v~iwd~~~~~~---~~~~~~h~~~v~~v~~sp~~~~las-~s~D~~v~~W~~~~ 371 (374)
++..+++|++||+.+++. +..+.. ...+..++|+|||++|+. ...++.|.+|++..
T Consensus 193 ~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 193 ANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp EETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred EeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 455689999999998887 777764 467788999999996654 45688999999864
No 153
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=3.2e-15 Score=136.50 Aligned_cols=142 Identities=10% Similarity=0.049 Sum_probs=94.3
Q ss_pred cCCcEEEEecc-CCCC-ceeeee--cCccCeEEEEEecCCCceEEEec-CCeEEEEEcCCCCCeEEE-EEeee---c---
Q 017296 229 EDGSILVWDIR-NPGI-PLTAMK--VHLEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVI-KKEIN---L--- 296 (374)
Q Consensus 229 ~dg~i~iwdl~-~~~~-~~~~~~--~h~~~v~~~~~~~~~~~~~s~s~-D~~i~lwd~~~~~~~~~~-~~~~~---~--- 296 (374)
.++.|++||+. +... .+..+. .|...+..+.|+|++..++.++. +++|.+|+++..++.... ...+. .
T Consensus 165 ~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~ 244 (365)
T 1jof_A 165 TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIP 244 (365)
T ss_dssp TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCC
T ss_pred CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcC
Confidence 35667777765 2211 111222 13456888999999988877664 789999998754554321 11111 1
Q ss_pred -CCC------CeEEEE-ECCCCCEEEEEeCC-C-----eEEEEEcc-CCeEEE---EecccCCceEEEEEeC---CCCEE
Q 017296 297 -ERP------GISGTS-IRPDSKIAATAGWD-R-----RVRIYNYR-KGSALA---ILKYHHATCNAVSFSS---DCKLM 355 (374)
Q Consensus 297 -~~~------~v~~~~-~sp~~~~l~s~~~d-g-----~v~iwd~~-~~~~~~---~~~~h~~~v~~v~~sp---~~~~l 355 (374)
+.. .+..++ |+|||++|+++..+ . +|++|++. +++... ....+...+..++|+| ||++|
T Consensus 245 g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l 324 (365)
T 1jof_A 245 DRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWM 324 (365)
T ss_dssp CBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEE
T ss_pred CcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEE
Confidence 111 477899 99999988766543 2 89999996 565433 2334555677889999 89999
Q ss_pred EEEeCC-CcEEEecCC
Q 017296 356 ASASED-STVALWELY 370 (374)
Q Consensus 356 as~s~D-~~v~~W~~~ 370 (374)
++++.+ ++|++|++.
T Consensus 325 ~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 325 AITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEECSSSCEEEEEEEE
T ss_pred EEEEcCCCeEEEEEEc
Confidence 998765 899999875
No 154
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.73 E-value=3.1e-17 Score=153.41 Aligned_cols=147 Identities=13% Similarity=0.097 Sum_probs=114.2
Q ss_pred EEEEEecCCcEEEEeccCCC---------Cceee-----eecCccCeEEEEEecCCCceE----EEecCCeEEEEEcCCC
Q 017296 223 NVLAGYEDGSILVWDIRNPG---------IPLTA-----MKVHLEPVLCLSIDESCNGGI----SGGADQKIVLYNLDHS 284 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~---------~~~~~-----~~~h~~~v~~~~~~~~~~~~~----s~s~D~~i~lwd~~~~ 284 (374)
.+++++.|+ |++|+..... ..... ...+..+|.+++|++++..++ +++.|++|++||++..
T Consensus 50 ~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~ 128 (434)
T 2oit_A 50 LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTF 128 (434)
T ss_dssp EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHH
T ss_pred EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEcccc
Confidence 577777777 9998763100 00110 112456799999999999998 8899999999998642
Q ss_pred -----CC-eE-EEEEeeecCCCCeEEEEECCC-CCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEE
Q 017296 285 -----TG-SC-VIKKEINLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMA 356 (374)
Q Consensus 285 -----~~-~~-~~~~~~~~~~~~v~~~~~sp~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~la 356 (374)
.. .. ........|...|.+++|+|+ +.+|++++.||+|++||+++++......+|...|.+++|+|+|++||
T Consensus 129 ~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~la 208 (434)
T 2oit_A 129 SNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLA 208 (434)
T ss_dssp HCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEE
T ss_pred ccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEE
Confidence 10 10 112233446678999999998 88999999999999999998877766778999999999999999999
Q ss_pred EEeCCCcEEEecCC
Q 017296 357 SASEDSTVALWELY 370 (374)
Q Consensus 357 s~s~D~~v~~W~~~ 370 (374)
+|+.|++|++|+..
T Consensus 209 sgs~dg~v~iwd~~ 222 (434)
T 2oit_A 209 VGKQNGTVVQYLPT 222 (434)
T ss_dssp EEETTSCEEEECTT
T ss_pred EEcCCCcEEEEccC
Confidence 99999999999975
No 155
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.73 E-value=1.8e-16 Score=145.58 Aligned_cols=317 Identities=14% Similarity=0.076 Sum_probs=173.6
Q ss_pred CCCCCeEEeecCCCceeE-----EEEeCCCCEEEEecC-CC--cEEEEeCcccceeeeeeeeeceeeeEEeccCCccccc
Q 017296 6 PPPDPVAVLRGHRASVTD-----VCFHQTKPILFAGTT-GG--ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLN 77 (374)
Q Consensus 6 ~~~~~~~~l~gH~~~V~~-----l~~~~~~~~l~s~s~-D~--~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (374)
....++..|..|...... .+|+|||+.|+.++. ++ .|.+||+.+++.......+. ..+....+++ +++
T Consensus 18 ~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~--~~~~~~~~sp--dg~ 93 (388)
T 3pe7_A 18 STGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRG--DNTFGGFLSP--DDD 93 (388)
T ss_dssp TTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSC--BCSSSCEECT--TSS
T ss_pred CCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCC--CCccceEEcC--CCC
Confidence 334677788888876666 899999998887776 66 48888988877654433332 1222455766 678
Q ss_pred eeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCC
Q 017296 78 KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVP 157 (374)
Q Consensus 78 ~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (374)
+|+.++.++.|++||+.+++... .................+..... ...... . ....
T Consensus 94 ~l~~~~~~~~l~~~d~~~g~~~~----~~~~~~~~~~~~~~~~~~dg~~l--------~~~~~~---~--------~~~~ 150 (388)
T 3pe7_A 94 ALFYVKDGRNLMRVDLATLEENV----VYQVPAEWVGYGTWVANSDCTKL--------VGIEIR---R--------EDWV 150 (388)
T ss_dssp EEEEEETTTEEEEEETTTCCEEE----EEECCTTEEEEEEEEECTTSSEE--------EEEEEE---G--------GGCC
T ss_pred EEEEEeCCCeEEEEECCCCccee----eeechhhcccccceeECCCCCee--------cccccc---C--------cccc
Confidence 89999989999999998874210 00000000000000000000000 000000 0 0000
Q ss_pred CCCCc--eE-EEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeec-CCCCCceEEEEEec----
Q 017296 158 AEGPK--YM-AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLP-SKSQGFVNVLAGYE---- 229 (374)
Q Consensus 158 ~~~~~--~~-~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gs~---- 229 (374)
+.... +. ......+..|.+||+.+++......... .. ....+.| + + ..++..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~-------------~~-~~~~~sp~d---g-~~l~~~~~~~~~ 212 (388)
T 3pe7_A 151 PLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQ-------------WL-GHPIYRPYD---D-STVAFCHEGPHD 212 (388)
T ss_dssp CCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESS-------------CE-EEEEEETTE---E-EEEEEEECSCTT
T ss_pred cccccchhhhhhccCCcceEEEEECCCCceEEeecCCc-------------cc-cccEECCCC---C-CEEEEEEecCCC
Confidence 00000 00 0122334689999999886433322110 00 1112333 2 2 23444443
Q ss_pred --CCcEEEEeccCCCCceeeeecCc--cCeEEEEEecCCCceEEEecC-----CeEEEEEcCCCCCeEEEEEeeecCCC-
Q 017296 230 --DGSILVWDIRNPGIPLTAMKVHL--EPVLCLSIDESCNGGISGGAD-----QKIVLYNLDHSTGSCVIKKEINLERP- 299 (374)
Q Consensus 230 --dg~i~iwdl~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~- 299 (374)
...|.++|+.. . ....+..+. ..+....|+|++..++..+.+ ..|.+||++........ .......
T Consensus 213 ~~~~~l~~~d~~~-~-~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~--~~~~~~~~ 288 (388)
T 3pe7_A 213 LVDARMWLINEDG-T-NMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLT--SMPACSHL 288 (388)
T ss_dssp TSSCSEEEEETTS-C-CCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEE--EECCEEEE
T ss_pred CCcceEEEEeCCC-C-ceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEE--cCCCceee
Confidence 23677777753 2 233344444 357788999999877654432 24999998755322221 1111000
Q ss_pred --CeEEEEECCCCCEEEEE---------eCCCeEEEEEccCCeEEEEecccCC-----------ceEEEEEeCCCCEEEE
Q 017296 300 --GISGTSIRPDSKIAATA---------GWDRRVRIYNYRKGSALAILKYHHA-----------TCNAVSFSSDCKLMAS 357 (374)
Q Consensus 300 --~v~~~~~sp~~~~l~s~---------~~dg~v~iwd~~~~~~~~~~~~h~~-----------~v~~v~~sp~~~~las 357 (374)
.....+|+|||+.|+.. ..+..|.+||+.+++. ..+..|.. .+.+++|+|||+.|+.
T Consensus 289 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~ 367 (388)
T 3pe7_A 289 MSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILF 367 (388)
T ss_dssp EECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEE
T ss_pred eecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEE
Confidence 01123799999987743 4567999999988764 45555655 5788899999997776
Q ss_pred Ee-CCCcEEEecCCCC
Q 017296 358 AS-EDSTVALWELYPP 372 (374)
Q Consensus 358 ~s-~D~~v~~W~~~~~ 372 (374)
++ .++...||.+..+
T Consensus 368 ~s~~~g~~~l~~~~l~ 383 (388)
T 3pe7_A 368 TSDVHGKPALYLATLP 383 (388)
T ss_dssp EECTTSSCEEEEEECC
T ss_pred EecCCCceeEEEEECC
Confidence 54 6888889877544
No 156
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=1.2e-14 Score=131.32 Aligned_cols=198 Identities=16% Similarity=0.063 Sum_probs=131.7
Q ss_pred ceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEE-ecCCcEEEEeccC
Q 017296 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAG-YEDGSILVWDIRN 240 (374)
Q Consensus 162 ~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-s~dg~i~iwdl~~ 240 (374)
++++++...++.|.+||+++++.+..+....... +.. ..........+.++ +...++++ ..++.|.+||+++
T Consensus 101 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~s~d---g~~l~~~~~~~~~~i~~~d~~~ 173 (353)
T 3vgz_A 101 QTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKR-TEE---VRPLQPRELVADDA---TNTVYISGIGKESVIWVVDGGN 173 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEEESCCCCC-CSS---CCCCEEEEEEEETT---TTEEEEEEESSSCEEEEEETTT
T ss_pred CEEEEEecCCCEEEEEeCCCCeeEEEEecCCCcc-ccc---cCCCCCceEEECCC---CCEEEEEecCCCceEEEEcCCC
Confidence 4556666677899999999998776664321100 000 00000001123332 33223333 3588999999975
Q ss_pred CCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee--ecCCCCeEEEEECCCCCEEEEEeC
Q 017296 241 PGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI--NLERPGISGTSIRPDSKIAATAGW 318 (374)
Q Consensus 241 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~--~~~~~~v~~~~~sp~~~~l~s~~~ 318 (374)
......+..+...+..+.+++++..++.++.++.|.+||+... ........ ..+...+..++|+|++++++.++.
T Consensus 174 -~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 174 -IKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADN--KILSRKKLLDDGKEHFFINISLDTARQRAFITDS 250 (353)
T ss_dssp -TEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTT--EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES
T ss_pred -CceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCC--eEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC
Confidence 3444555545666888999999998999999999999998654 22221111 113445778999999997766655
Q ss_pred -CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEE-EEEeCCCcEEEecCCC
Q 017296 319 -DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASASEDSTVALWELYP 371 (374)
Q Consensus 319 -dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-as~s~D~~v~~W~~~~ 371 (374)
++.|.+||..+++.+..+..+. ...++|+|+|+++ ++...|+.|.+||...
T Consensus 251 ~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 303 (353)
T 3vgz_A 251 KAAEVLVVDTRNGNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKS 303 (353)
T ss_dssp SSSEEEEEETTTCCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTT
T ss_pred CCCEEEEEECCCCcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCC
Confidence 5999999999998887776443 2568999999955 5555799999999864
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.70 E-value=2.4e-14 Score=129.53 Aligned_cols=268 Identities=14% Similarity=0.191 Sum_probs=151.0
Q ss_pred eecCCCceeEEEEeCCCCEEEEecC---CCcEEEEeCcccce--eeeeeeeeceeeeEEeccCCccccceeeecc-ccCe
Q 017296 14 LRGHRASVTDVCFHQTKPILFAGTT---GGELRIWDTVQHRT--VSSSWVHSAAHGIVSVATGPSIGLNKVISQG-RDGT 87 (374)
Q Consensus 14 l~gH~~~V~~l~~~~~~~~l~s~s~---D~~v~vWd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~D~~ 87 (374)
...+......|+|+|+|+ |++++. ++.|.+||+.+++. +..+..+. .....+++++ ++++|++++ .+++
T Consensus 35 ~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~--~~p~~~a~sp--dg~~l~~~~~~~~~ 109 (347)
T 3hfq_A 35 LLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPG--TPPAYVAVDE--ARQLVYSANYHKGT 109 (347)
T ss_dssp EEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEES--CCCSEEEEET--TTTEEEEEETTTTE
T ss_pred eeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCC--CCCEEEEECC--CCCEEEEEeCCCCE
Confidence 345667788899999999 555543 68999999976652 22222222 2345566766 667777666 7899
Q ss_pred EEEEecCC-CCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEE
Q 017296 88 VKCWDIEN-GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAV 166 (374)
Q Consensus 88 vrvwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (374)
+++|++.. +... .+.. + ..... .+. .......+. ...+.+++ + +++
T Consensus 110 v~v~~~~~~g~~~-----~~~~-------~--~~~~~-------~p~---~~~~~~~~~-------~~~~spdg-~-l~v 156 (347)
T 3hfq_A 110 AEVMKIAADGALT-----LTDT-------V--QHSGH-------GPR---PEQDGSHIH-------YTDLTPDN-R-LAV 156 (347)
T ss_dssp EEEEEECTTSCEE-----EEEE-------E--ECCCC-------CSS---TTCSSCCEE-------EEEECTTS-C-EEE
T ss_pred EEEEEeCCCCCee-----ecce-------e--ecCCC-------CCC---ccccCCCce-------EEEECCCC-c-EEE
Confidence 99999963 2110 0000 0 00000 000 000000000 00122333 3 556
Q ss_pred cccCCCeEEEEecC-CCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCce
Q 017296 167 AGEQLSEVEIWDLN-TAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (374)
Q Consensus 167 ~~~~d~~i~vWd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~ 245 (374)
+...++.|++||+. +++... ...... ..+.. ... ..+.+ .+...+++...++.|.+|++......+
T Consensus 157 ~~~~~~~v~~~~~~~~g~~~~-~~~~~~-------~~g~~-p~~-~~~sp---dg~~l~v~~~~~~~v~v~~~~~~~g~~ 223 (347)
T 3hfq_A 157 IDLGSDKVYVYNVSDAGQLSE-QSVLTM-------EAGFG-PRH-LVFSP---DGQYAFLAGELSSQIASLKYDTQTGAF 223 (347)
T ss_dssp EETTTTEEEEEEECTTSCEEE-EEEEEC-------CTTCC-EEE-EEECT---TSSEEEEEETTTTEEEEEEEETTTTEE
T ss_pred EeCCCCEEEEEEECCCCcEEE-eeeEEc-------CCCCC-Cce-EEECC---CCCEEEEEeCCCCEEEEEEecCCCCce
Confidence 66667899999998 454221 110000 00000 001 12433 233345557788999999987421111
Q ss_pred ---eeeecCc------cCeEEEEEecCCCce-EEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEE
Q 017296 246 ---TAMKVHL------EPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAAT 315 (374)
Q Consensus 246 ---~~~~~h~------~~v~~~~~~~~~~~~-~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s 315 (374)
..+.... ..+..++|+|++..+ ++...++.|.+|+++.. +.......+..+...+..++|+||+++|++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~spdg~~l~v 302 (347)
T 3hfq_A 224 TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD-GHLTLIQQISTEGDFPRDFDLDPTEAFVVV 302 (347)
T ss_dssp EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG-GCEEEEEEEECSSSCCCEEEECTTSSEEEE
T ss_pred EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC-CcEEEeEEEecCCCCcCeEEECCCCCEEEE
Confidence 2222222 347889999999876 55667999999999632 233333334444445789999999998888
Q ss_pred EeCC-CeEEEEEc--cCCeEE
Q 017296 316 AGWD-RRVRIYNY--RKGSAL 333 (374)
Q Consensus 316 ~~~d-g~v~iwd~--~~~~~~ 333 (374)
++.+ +.|.+|++ .+++..
T Consensus 303 ~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 303 VNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EETTTTEEEEEEECTTTCCEE
T ss_pred EEcCCCcEEEEEEeCCCCeEE
Confidence 7765 89999955 456543
No 158
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.69 E-value=3.6e-15 Score=148.29 Aligned_cols=317 Identities=8% Similarity=-0.024 Sum_probs=163.9
Q ss_pred CCeEEeecCCC---ceeEEEEeCCCCEEEEecCC---------CcEEEEeCcccceeeeeeeee-ceeeeEEeccCCccc
Q 017296 9 DPVAVLRGHRA---SVTDVCFHQTKPILFAGTTG---------GELRIWDTVQHRTVSSSWVHS-AAHGIVSVATGPSIG 75 (374)
Q Consensus 9 ~~~~~l~gH~~---~V~~l~~~~~~~~l~s~s~D---------~~v~vWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 75 (374)
++...+.+|.. .|.+++|+|||++|++++.+ +.+.+||+.+++. ..+..+. ....+..++|++ +
T Consensus 48 ~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SP--d 124 (723)
T 1xfd_A 48 TSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGP--K 124 (723)
T ss_dssp CCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCS--S
T ss_pred cEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECC--C
Confidence 55667777776 49999999999999998765 7788999988765 2222111 111255677877 6
Q ss_pred cceeeeccccCeEEEEecCCCCCCCCCceeeeec-c--e--ee--------------eeeeeeccccccccccCCCCccc
Q 017296 76 LNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTN-S--Y--HF--------------CKLSLVKEPYANAKQANEPKDCY 136 (374)
Q Consensus 76 ~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~-~--~--~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 136 (374)
+++++.++. +.|++||+.+++.. .+... . . +. ..+.+. +..........
T Consensus 125 G~~la~~~~-~~i~~~~~~~g~~~-----~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~S--pDg~~la~~~~---- 192 (723)
T 1xfd_A 125 GQQLIFIFE-NNIYYCAHVGKQAI-----RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWS--PDGTRLAYAAI---- 192 (723)
T ss_dssp TTCEEEEET-TEEEEESSSSSCCE-----EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEEC--TTSSEEEEEEE----
T ss_pred CCEEEEEEC-CeEEEEECCCCceE-----EEecCCCCCceECcccceeEEEEeccCcceEEEC--CCCCEEEEEEE----
Confidence 788888775 79999999887431 11000 0 0 00 000000 00000000000
Q ss_pred ccccCceeecCCCCCCCCCCCCCCCceEEE--cc--cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEe
Q 017296 137 EREVGETVDTDSLCDSKDDVPAEGPKYMAV--AG--EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQA 212 (374)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (374)
.............. .. . .+....+.. .| ..+.+|.+||+.+++....+..+.. ... .... +....
T Consensus 193 ~~~~~~~~~~~~~~--~~-~-~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~-----~~~-~~~~-~~~~~ 261 (723)
T 1xfd_A 193 NDSRVPIMELPTYT--GS-I-YPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD-----PRM-REYY-ITMVK 261 (723)
T ss_dssp ECTTSCEEEECCCS--SS-S-SCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC-----GGG-SSEE-EEEEE
T ss_pred CCCccceEEeeccC--Cc-C-CCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc-----CCC-ccce-eEEEE
Confidence 00000000000000 00 0 000000000 01 1134799999998875444432100 000 0111 11123
Q ss_pred eecCCCCCceEEEEEe----cCCcEEEEeccCCCCceeeeec-CccCe----EEEEEecCCCceEE--EecCC------e
Q 017296 213 YLPSKSQGFVNVLAGY----EDGSILVWDIRNPGIPLTAMKV-HLEPV----LCLSIDESCNGGIS--GGADQ------K 275 (374)
Q Consensus 213 ~~~~~~~~~~~~~~gs----~dg~i~iwdl~~~~~~~~~~~~-h~~~v----~~~~~~~~~~~~~s--~s~D~------~ 275 (374)
+.++ +. .+++.+ .+..|.+||+.+. .....+.. +...+ ..+.|+|++..++. +..|+ .
T Consensus 262 ~SpD---g~-~l~~~~~~~~~~~~i~~~d~~~g-~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 336 (723)
T 1xfd_A 262 WATS---TK-VAVTWLNRAQNVSILTLCDATTG-VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYH 336 (723)
T ss_dssp ESSS---SE-EEEEEEETTSCEEEEEEEETTTC-CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEE
T ss_pred EeCC---Ce-EEEEEEcCCCCeEEEEEEeCCCC-cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeE
Confidence 4443 32 454443 2367999999764 33333333 33333 37889999987764 45677 4
Q ss_pred EEEEE-cCCCCCeEEEEEeeecCCCCeEE-EEECCCCCEEEEEeCC---CeEEEEEccCCe--EEEEecc---cCCceEE
Q 017296 276 IVLYN-LDHSTGSCVIKKEINLERPGISG-TSIRPDSKIAATAGWD---RRVRIYNYRKGS--ALAILKY---HHATCNA 345 (374)
Q Consensus 276 i~lwd-~~~~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~l~s~~~d---g~v~iwd~~~~~--~~~~~~~---h~~~v~~ 345 (374)
|.+|| .......+. ..+......+.. ++|+||++.|+..+.+ ++++||++.... ....+.. |...+..
T Consensus 337 l~~~d~~~~~~~~~~--~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~ 414 (723)
T 1xfd_A 337 ITVSSSQPNSSNDNI--QSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFS 414 (723)
T ss_dssp EEEECSSCCSSSCCC--CBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCE
T ss_pred EEEEeccCCCCccce--eEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEE
Confidence 55566 222210000 111112223444 6899999998766555 889999986432 2333443 6677889
Q ss_pred EEEeCCCCEEEEE
Q 017296 346 VSFSSDCKLMASA 358 (374)
Q Consensus 346 v~~sp~~~~las~ 358 (374)
++|+|||++|+..
T Consensus 415 ~~~spdg~~l~~~ 427 (723)
T 1xfd_A 415 ASFSHSMDFFLLK 427 (723)
T ss_dssp EEECTTSSEEEEE
T ss_pred EEECCCCCEEEEE
Confidence 9999999977754
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.69 E-value=7.9e-16 Score=153.09 Aligned_cols=291 Identities=7% Similarity=-0.043 Sum_probs=164.3
Q ss_pred eEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeece-eeeEEeccCCccccceeeeccc---------cCeEEEE
Q 017296 22 TDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIVSVATGPSIGLNKVISQGR---------DGTVKCW 91 (374)
Q Consensus 22 ~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~s~~~---------D~~vrvw 91 (374)
..++|+|+|.+++++ .|++|++||..+++....+..|... ..+..+++++ |+++|++++. |++|++|
T Consensus 19 ~~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp--Dg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP--DRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT--TSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccccccceeeEEECC--CCCeEEEEecCceeEEeecceEEEEE
Confidence 368999999766665 5999999999988765544333210 1256778887 7788887765 7999999
Q ss_pred ecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCC
Q 017296 92 DIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL 171 (374)
Q Consensus 92 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 171 (374)
|+.+++...... +. . .. . ...+.+++ +.++.+. +
T Consensus 96 d~~~g~~~~~~~--l~-~-------------~~---------~------------------~~~~SPDG-~~la~~~--~ 129 (719)
T 1z68_A 96 DLSNGEFVRGNE--LP-R-------------PI---------Q------------------YLCWSPVG-SKLAYVY--Q 129 (719)
T ss_dssp ETTTTEECCSSC--CC-S-------------SB---------C------------------CEEECSST-TCEEEEE--T
T ss_pred ECCCCcccccee--cC-c-------------cc---------c------------------cceECCCC-CEEEEEE--C
Confidence 998874310000 00 0 00 0 00122333 3444443 5
Q ss_pred CeEEEEecCCCceeEEeccCccCC-CCCcCC-------CCCcceeEEEeeecCCCCCceEEEEEecCC------------
Q 017296 172 SEVEIWDLNTAERCTRLHQNSCGG-SPNFSS-------KGRGMCMAVQAYLPSKSQGFVNVLAGYEDG------------ 231 (374)
Q Consensus 172 ~~i~vWd~~~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg------------ 231 (374)
++|++||+.+++............ ..+... ..... . ..+.|+ +. .|+.++.|.
T Consensus 130 ~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~--~-~~wSPD---G~-~la~~~~d~~~~~~~~~~~~~ 202 (719)
T 1z68_A 130 NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKY--A-LWWSPN---GK-FLAYAEFNDTDIPVIAYSYYG 202 (719)
T ss_dssp TEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSC--C-EEECTT---SS-EEEEEEEECTTSCEEEEEECC
T ss_pred CeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcc--c-EEECCC---CC-EEEEEEECCCCCceEEeeccC
Confidence 799999999887543221110000 000000 00000 0 123332 22 455554431
Q ss_pred ----------------------cEEEEeccCCCC----ce---eeeecCccCeEEEEEecCCCceEEEec--C--CeEEE
Q 017296 232 ----------------------SILVWDIRNPGI----PL---TAMKVHLEPVLCLSIDESCNGGISGGA--D--QKIVL 278 (374)
Q Consensus 232 ----------------------~i~iwdl~~~~~----~~---~~~~~h~~~v~~~~~~~~~~~~~s~s~--D--~~i~l 278 (374)
.|++||+..... .+ ..+.+|...+..++|+|++..+++... + ..|.+
T Consensus 203 ~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~ 282 (719)
T 1z68_A 203 DEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSI 282 (719)
T ss_dssp SSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEE
T ss_pred CCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEE
Confidence 788999875321 01 123457888999999999765555332 2 24777
Q ss_pred EE----cCCCCCeEEEEEeeecCCCCeE-----EEEECCCCCEEE--EEeCCC--eEEEEEccCCeEEEEecccCCceEE
Q 017296 279 YN----LDHSTGSCVIKKEINLERPGIS-----GTSIRPDSKIAA--TAGWDR--RVRIYNYRKGSALAILKYHHATCNA 345 (374)
Q Consensus 279 wd----~~~~~~~~~~~~~~~~~~~~v~-----~~~~sp~~~~l~--s~~~dg--~v~iwd~~~~~~~~~~~~h~~~v~~ 345 (374)
|| ++..............+...+. .+.|+|||+.++ +...+| .|.+||+.+++ ...+..+...+..
T Consensus 283 ~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~ 361 (719)
T 1z68_A 283 CDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAIN 361 (719)
T ss_dssp EEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEE
T ss_pred EcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEE
Confidence 88 5432211111000022333444 789999999654 454566 46666776655 4456666667888
Q ss_pred EEEeCCCCEEEEEeCC-----CcEEEecCC
Q 017296 346 VSFSSDCKLMASASED-----STVALWELY 370 (374)
Q Consensus 346 v~~sp~~~~las~s~D-----~~v~~W~~~ 370 (374)
+.++ +++.|+..+.+ +.+++|.+.
T Consensus 362 ~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 362 IFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred EEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 8888 88877666554 889999864
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.68 E-value=9.9e-16 Score=148.68 Aligned_cols=136 Identities=17% Similarity=0.138 Sum_probs=104.9
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecC----CeEEEEEcCCCCCeEEEEEeeecCCC
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLDHSTGSCVIKKEINLERP 299 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D----~~i~lwd~~~~~~~~~~~~~~~~~~~ 299 (374)
+++...++.+.+||+... . ...+..+.. ..+.|+|++..+++++.| +.|.+||++..... .+..+..
T Consensus 125 ~~~s~~~~~~~l~d~~~g-~-~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-----~l~~~~~ 195 (582)
T 3o4h_A 125 VFTGATEDRVALYALDGG-G-LRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-----VFDSGEG 195 (582)
T ss_dssp EEEEECSSCEEEEEEETT-E-EEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-----EECCSSC
T ss_pred EEEecCCCCceEEEccCC-c-EEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-----EeecCCC
Confidence 344444445559999753 3 223333333 788999999999988877 78999998755422 2334555
Q ss_pred CeEEEEECCCCCEEEEEeCCC--eEEEEEccCCeEEEEecccCCceEEEE--------EeCCCCEEEEEeCCCcEEEecC
Q 017296 300 GISGTSIRPDSKIAATAGWDR--RVRIYNYRKGSALAILKYHHATCNAVS--------FSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 300 ~v~~~~~sp~~~~l~s~~~dg--~v~iwd~~~~~~~~~~~~h~~~v~~v~--------~sp~~~~las~s~D~~v~~W~~ 369 (374)
.+...+|||||++|+++..++ .|++||+.+++.. .+.+|...+..++ |+|||+++++++.|+++++|++
T Consensus 196 ~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 196 SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 688999999999999888898 8999999988877 7778887777777 9999999999999999999986
No 161
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.67 E-value=5e-14 Score=128.41 Aligned_cols=279 Identities=11% Similarity=0.126 Sum_probs=164.8
Q ss_pred CCCEEEEe------cCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeecc----------ccCeEEEEe
Q 017296 29 TKPILFAG------TTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWD 92 (374)
Q Consensus 29 ~~~~l~s~------s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~D~~vrvwd 92 (374)
++++++.. ..|+.|.+||..+++.+..+..+.. . .+++++ ++++++.+. .|++|.+||
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~--p--~i~~sp--dg~~lyv~~~~~~~~~~g~~~~~v~v~d 87 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFN--G--HVQVSN--DGKKIYTMTTYHERITRGKRSDVVEVWD 87 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEE--E--EEEECT--TSSEEEEEEEEETTSSSSCEEEEEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCC--C--ceEECC--CCCEEEEEEecccccccCCCCCEEEEEE
Confidence 45555543 3478999999998887766554322 1 556776 667777664 478899999
Q ss_pred cCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccC-C
Q 017296 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQ-L 171 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-d 171 (374)
+.+++... .+... ..... .+ ..+... .+ .++++++.++... +
T Consensus 88 ~~t~~~~~----~i~~~----------~~~~~----~g-------~~p~~i-----------~~-spdg~~l~v~n~~~~ 130 (361)
T 2oiz_A 88 ADKLTFEK----EISLP----------PKRVQ----GL-------NYDGLF-----------RQ-TTDGKFIVLQNASPA 130 (361)
T ss_dssp TTTCCEEE----EEEEC----------TTBCC----BC-------CCGGGE-----------EE-CTTSSEEEEEEESSS
T ss_pred CcCCcEEE----EEEcC----------ccccc----cC-------CCcceE-----------EE-CCCCCEEEEECCCCC
Confidence 98753210 11000 00000 00 000000 01 1233455555433 6
Q ss_pred CeEEEEecCCCceeEE-eccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee----
Q 017296 172 SEVEIWDLNTAERCTR-LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT---- 246 (374)
Q Consensus 172 ~~i~vWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~---- 246 (374)
++|.+||+++++.+.. +.... +..+ .+.+. +...+++.+.||.+.+|++...+....
T Consensus 131 ~~v~v~d~~~~~~~~~~i~~~~--------------~~~v-~~~p~---~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~ 192 (361)
T 2oiz_A 131 TSIGIVDVAKGDYVEDVTAAAG--------------CWSV-IPQPN---RPRSFMTICGDGGLLTINLGEDGKVASQSRS 192 (361)
T ss_dssp EEEEEEETTTTEEEEEEGGGTT--------------EEEE-EECTT---SSSEEEEEETTSSEEEEEECTTSSEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEecCCC--------------ccee-EEcCC---CCeeEEEECCCCcEEEEEECCCCcEeeeccc
Confidence 7999999999987766 53210 0001 12222 222467788999999999865333221
Q ss_pred --eeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeec----C----CCCeEEEEECCCCCEEEEE
Q 017296 247 --AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL----E----RPGISGTSIRPDSKIAATA 316 (374)
Q Consensus 247 --~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~----~----~~~v~~~~~sp~~~~l~s~ 316 (374)
.+..+..++ .+.+.+++..++..+.++.+.++|+...+........... . ..+...++|+|+++.+..+
T Consensus 193 ~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~ 271 (361)
T 2oiz_A 193 KQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVF 271 (361)
T ss_dssp CCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEE
T ss_pred cceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEE
Confidence 111122222 1222344455666778899999998644322211111000 0 0112237899998877655
Q ss_pred eC-----------CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 317 GW-----------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 317 ~~-----------dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
.. .++|.+||+.+++.+.++..+. +.+++|+|||++|++++. ++|.+||....
T Consensus 272 ~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 272 MHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp EESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSS
T ss_pred EccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCC
Confidence 43 3589999999999999998777 999999999999998886 99999998653
No 162
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.66 E-value=2e-13 Score=119.99 Aligned_cols=139 Identities=17% Similarity=0.268 Sum_probs=98.9
Q ss_pred EEEEecCCcEEEEeccCCCCceeeee--cCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecC--CC
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMK--VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE--RP 299 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~--~~ 299 (374)
+++.+.++.|.+||.. +..+..+. .+...+..+++++++..+++.+.++.|++||.+.. .. ..+..+ ..
T Consensus 135 ~v~~~~~~~i~~~~~~--g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~---~~--~~~~~~g~~~ 207 (286)
T 1q7f_A 135 IVVECKVMRVIIFDQN--GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQ---YL--RQIGGEGITN 207 (286)
T ss_dssp EEEETTTTEEEEECTT--SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCC---EE--EEESCTTTSC
T ss_pred EEEECCCCEEEEEcCC--CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCC---EE--EEEccCCccC
Confidence 4444556677777753 22233332 34456788999998886677778999999997532 22 122212 24
Q ss_pred CeEEEEECCCCCEEEEEeCCC-eEEEEEccCCeEEEEecccC--CceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 300 GISGTSIRPDSKIAATAGWDR-RVRIYNYRKGSALAILKYHH--ATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 300 ~v~~~~~sp~~~~l~s~~~dg-~v~iwd~~~~~~~~~~~~h~--~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
....++++|+++++++...++ .|.+||. +++.+..+..+. ..+.+++++|+|+++++ +.|++|++|++..
T Consensus 208 ~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 208 YPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp SEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSC
T ss_pred CCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccc
Confidence 578999999999988888786 9999995 577777666554 34789999999998887 6799999999854
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.60 E-value=1e-12 Score=118.10 Aligned_cols=115 Identities=13% Similarity=0.099 Sum_probs=86.9
Q ss_pred cCeEEEEEecC-CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEE-------eCCCeEEE
Q 017296 253 EPVLCLSIDES-CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA-------GWDRRVRI 324 (374)
Q Consensus 253 ~~v~~~~~~~~-~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-------~~dg~v~i 324 (374)
.....++++++ +..+++...++.|++||.+. +..........+...+..++|+| +..+++. ..+.+|++
T Consensus 196 ~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~--G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~ 272 (329)
T 3fvz_A 196 SVPHSLALVPHLDQLCVADRENGRIQCFKTDT--KEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFV 272 (329)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTT--CCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEE
T ss_pred CCCcEEEEECCCCEEEEEECCCCEEEEEECCC--CcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEE
Confidence 45778999987 66667778899999999863 33332222223345688999999 4333333 34559999
Q ss_pred EEccCCeEEEEe---cccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 325 YNYRKGSALAIL---KYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 325 wd~~~~~~~~~~---~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
||..+++.+..+ .++...+..|+++|+|.++++.+.++.|++|++.
T Consensus 273 ~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 273 MNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp EETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred EEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 999999988887 3677789999999999999999999999999874
No 164
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.60 E-value=9.2e-14 Score=127.56 Aligned_cols=310 Identities=14% Similarity=0.022 Sum_probs=167.9
Q ss_pred CCCCCeEEeecCCCc-----eeEEEEeCCCCEEEEecC-C--CcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccc
Q 017296 6 PPPDPVAVLRGHRAS-----VTDVCFHQTKPILFAGTT-G--GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLN 77 (374)
Q Consensus 6 ~~~~~~~~l~gH~~~-----V~~l~~~~~~~~l~s~s~-D--~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (374)
...+.+..|..+... +..++|+|+|++|+.... + ..+.+||+.+++.......+. .....+.+++ +++
T Consensus 18 ~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~--~~~~~~~~sp--dg~ 93 (396)
T 3c5m_A 18 DTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKG--DNTFGGFIST--DER 93 (396)
T ss_dssp TTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSC--BCTTTCEECT--TSS
T ss_pred CCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCC--CccccceECC--CCC
Confidence 344556667666544 788999999998765543 2 468888988776433221111 1111244555 678
Q ss_pred eeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCC
Q 017296 78 KVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVP 157 (374)
Q Consensus 78 ~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (374)
+|+..+.++.|.+||+.+++.. .+........ +......+......... ... ...+.
T Consensus 94 ~l~~~~~~~~l~~~d~~~~~~~-----~~~~~~~~~~-------~~g~~l~~~~~~~~~~~-----~~~------~~~~s 150 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETLEEQ-----VIYTVDEEWK-------GYGTWVANSDCTKLVGI-----EIL------KRDWQ 150 (396)
T ss_dssp EEEEEETTTEEEEEETTTCCEE-----EEEECCTTEE-------EEEEEEECTTSSEEEEE-----EEE------GGGCC
T ss_pred EEEEEEcCCcEEEEECCCCCcE-----EEEecccccC-------CCCCEEEeccCCccccc-----ccc------ccccC
Confidence 8988888889999999876421 1110000000 00000000000000000 000 00111
Q ss_pred CCCCceEEEcc----cCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecC---
Q 017296 158 AEGPKYMAVAG----EQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED--- 230 (374)
Q Consensus 158 ~~~~~~~~~~~----~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d--- 230 (374)
+++ +.+++.. ..+..|.+||+.+++......... . .....+.+. .+ ..++..+.+
T Consensus 151 pdg-~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~-----------~---~~~~~~sp~--dg-~~l~~~~~~~~~ 212 (396)
T 3c5m_A 151 PLT-SWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTA-----------W---LGHPIYRPF--DD-STVGFCHEGPHD 212 (396)
T ss_dssp CCC-SHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESS-----------C---EEEEEEETT--EE-EEEEEEECSCSS
T ss_pred CCC-cceeeeeeccCCCcceEEEEECCCCcEEeeccCCc-----------c---cccceECCC--CC-CEEEEEecCCCC
Confidence 222 2222222 345689999999887533322110 0 011123321 12 234433333
Q ss_pred ---CcEEEEeccCCCCceeeeecC--ccCeEEEEEecCCCceEEEecC-----CeEEEEEcCCCCCeEEEEEeeecCCCC
Q 017296 231 ---GSILVWDIRNPGIPLTAMKVH--LEPVLCLSIDESCNGGISGGAD-----QKIVLYNLDHSTGSCVIKKEINLERPG 300 (374)
Q Consensus 231 ---g~i~iwdl~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~ 300 (374)
..|.+||+... . ...+..+ ...+..+.|+|++..++..+.+ +.|.+||++....... ... ..
T Consensus 213 ~~~~~l~~~d~~~~-~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l--~~~----~~ 284 (396)
T 3c5m_A 213 LVDARMWLVNEDGS-N-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEV--MVM----PP 284 (396)
T ss_dssp SCSCCCEEEETTSC-C-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEE--EEC----CS
T ss_pred CCCceEEEEECCCC-c-eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEe--eeC----CC
Confidence 46888887542 2 2223223 2357788999999887776554 4599999865432211 111 12
Q ss_pred eEEEEECC-CCCEEEEEe----------------CCCeEEEEEccCCeEEEEecccCC-----------ceEEEEEeCCC
Q 017296 301 ISGTSIRP-DSKIAATAG----------------WDRRVRIYNYRKGSALAILKYHHA-----------TCNAVSFSSDC 352 (374)
Q Consensus 301 v~~~~~sp-~~~~l~s~~----------------~dg~v~iwd~~~~~~~~~~~~h~~-----------~v~~v~~sp~~ 352 (374)
.. ..|+| |+++++.++ .+..|.+||+.+++. ..+..|.. .+..++|+|||
T Consensus 285 ~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg 362 (396)
T 3c5m_A 285 CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPND 362 (396)
T ss_dssp EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTS
T ss_pred CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCC
Confidence 33 88999 999888765 347899999987764 34544544 25668999999
Q ss_pred CEEEEEe-CCCcEEEecCC
Q 017296 353 KLMASAS-EDSTVALWELY 370 (374)
Q Consensus 353 ~~las~s-~D~~v~~W~~~ 370 (374)
+.|+.++ .++...||.+.
T Consensus 363 ~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 363 DGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp SEEEEEECTTSSCEEEEEE
T ss_pred CeEEEEecCCCCceEEEEE
Confidence 9887765 46777777653
No 165
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.60 E-value=1.1e-12 Score=119.56 Aligned_cols=277 Identities=10% Similarity=0.039 Sum_probs=162.7
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEec----------CCCcEEEEeCcccceeeeeeeeec----eeeeEEeccCCcc
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHSA----AHGIVSVATGPSI 74 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s----------~D~~v~vWd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 74 (374)
+.+.++..+..+ .++|+|+|++|+++. .+++|.+||..+++.+..+..+.. ......+++++
T Consensus 42 ~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp-- 117 (361)
T 2oiz_A 42 KFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT-- 117 (361)
T ss_dssp CEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT--
T ss_pred eEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC--
Confidence 455667667666 899999999999886 367899999988877666543210 01122345555
Q ss_pred ccceeeeccc--cCeEEEEecCCCCCCCCCceeeee-cceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCC
Q 017296 75 GLNKVISQGR--DGTVKCWDIENGGLSSNPSLTIKT-NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCD 151 (374)
Q Consensus 75 ~~~~l~s~~~--D~~vrvwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (374)
++++|+++.. +++|.+||+.+++.. .. .....+ .. +
T Consensus 118 dg~~l~v~n~~~~~~v~v~d~~~~~~~-------~~~i~~~~~---------------------~~------v------- 156 (361)
T 2oiz_A 118 DGKFIVLQNASPATSIGIVDVAKGDYV-------EDVTAAAGC---------------------WS------V------- 156 (361)
T ss_dssp TSSEEEEEEESSSEEEEEEETTTTEEE-------EEEGGGTTE---------------------EE------E-------
T ss_pred CCCEEEEECCCCCCeEEEEECCCCcEE-------EEEecCCCc---------------------ce------e-------
Confidence 6778877653 689999999876321 00 000000 00 0
Q ss_pred CCCCCCCCCCceEEEcccCCCeEEEEecCC-CceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecC
Q 017296 152 SKDDVPAEGPKYMAVAGEQLSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED 230 (374)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d 230 (374)
...+.++. ..++.+.|+.+.+|+++. ++......... .+........+ .+.+ .+. .++..+.+
T Consensus 157 ---~~~p~~~~-~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~-----~~~~~~~~~~~---~~~~---~g~-~~~~~~~~ 220 (361)
T 2oiz_A 157 ---IPQPNRPR-SFMTICGDGGLLTINLGEDGKVASQSRSKQ-----MFSVKDDPIFI---APAL---DKD-KAHFVSYY 220 (361)
T ss_dssp ---EECTTSSS-EEEEEETTSSEEEEEECTTSSEEEEEECCC-----CSCTTTSCBCS---CCEE---CSS-EEEEEBTT
T ss_pred ---EEcCCCCe-eEEEECCCCcEEEEEECCCCcEeeeccccc-----eEcCCCCceEE---Eecc---cCC-EEEEEeCC
Confidence 00011111 223445577888888865 44332211000 01110000000 0011 122 24445578
Q ss_pred CcEEEEeccCCCCce-eeeec------C----ccCeEEEEEecCCCceEEEec-----------CCeEEEEEcCCCCCeE
Q 017296 231 GSILVWDIRNPGIPL-TAMKV------H----LEPVLCLSIDESCNGGISGGA-----------DQKIVLYNLDHSTGSC 288 (374)
Q Consensus 231 g~i~iwdl~~~~~~~-~~~~~------h----~~~v~~~~~~~~~~~~~s~s~-----------D~~i~lwd~~~~~~~~ 288 (374)
+.|.++|+....... ..+.. + .....-+++++++..++.+.. .++|.+||++.. +.
T Consensus 221 ~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~--~~ 298 (361)
T 2oiz_A 221 GNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK--QR 298 (361)
T ss_dssp SEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT--EE
T ss_pred CeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC--cE
Confidence 899999986432111 11110 0 011122678888666655432 358999998643 32
Q ss_pred EEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCC--eEEEEecccCCceEEEEEeCCCC
Q 017296 289 VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG--SALAILKYHHATCNAVSFSSDCK 353 (374)
Q Consensus 289 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~--~~~~~~~~h~~~v~~v~~sp~~~ 353 (374)
. ..+..+. ..+++|+||+++|++++. ++|.+||..++ +.++++..+......++++|+|+
T Consensus 299 v--~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 299 V--ARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp E--EEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred E--EEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 2 3344444 889999999999998887 99999999999 99988877778889999999986
No 166
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.59 E-value=2.1e-12 Score=116.22 Aligned_cols=266 Identities=11% Similarity=0.051 Sum_probs=151.3
Q ss_pred CCeEEeecCC-CceeEEEEeCCCCEE-EEecCCCcEEEEeCcccceeeeeeeeec----eeeeEEeccCCccccceeeec
Q 017296 9 DPVAVLRGHR-ASVTDVCFHQTKPIL-FAGTTGGELRIWDTVQHRTVSSSWVHSA----AHGIVSVATGPSIGLNKVISQ 82 (374)
Q Consensus 9 ~~~~~l~gH~-~~V~~l~~~~~~~~l-~s~s~D~~v~vWd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~s~ 82 (374)
+.+..+..+. ..+..++|+|+|+++ ++++.++.|.+||+.+++.+..+..+.. ...+..+++++ ++++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~sp--dg~~l~~~ 109 (349)
T 1jmx_B 32 TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISP--DGKEVYAT 109 (349)
T ss_dssp EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECT--TSSEEEEE
T ss_pred cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECC--CCCEEEEE
Confidence 3445555443 257889999999865 5667789999999988876655432211 11244566766 66788888
Q ss_pred ccc------------CeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCC
Q 017296 83 GRD------------GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC 150 (374)
Q Consensus 83 ~~D------------~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (374)
+.+ ++|.+||+.+++.... +.. ...+.. ..+
T Consensus 110 ~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~----~~~----------~~~~~~--------~~~--------------- 152 (349)
T 1jmx_B 110 VNPTQRLNDHYVVKPPRLEVFSTADGLEAKP----VRT----------FPMPRQ--------VYL--------------- 152 (349)
T ss_dssp EEEEEECSSCEEECCCEEEEEEGGGGGGBCC----SEE----------EECCSS--------CCC---------------
T ss_pred cccccccccccccCCCeEEEEECCCccccce----eee----------ccCCCc--------ccc---------------
Confidence 765 8999999987532110 000 000000 000
Q ss_pred CCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCc---------CCCCC-cceeEE--EeeecCCC
Q 017296 151 DSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNF---------SSKGR-GMCMAV--QAYLPSKS 218 (374)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~--~~~~~~~~ 218 (374)
..+.++++ + ++++ +.|.+||+++++....+...... ...+ ..... ...... ..+.++..
T Consensus 153 ---~~~s~dg~-l-~~~~---~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 223 (349)
T 1jmx_B 153 ---MRAADDGS-L-YVAG---PDIYKMDVKTGKYTVALPLRNWN-RKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK 223 (349)
T ss_dssp ---EEECTTSC-E-EEES---SSEEEECTTTCCEEEEECSTTCC-CTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC----
T ss_pred ---eeECCCCc-E-EEcc---CcEEEEeCCCCceeccccccccC-CccccCccceeeecCCCcceeEEeeeeeeecCCCc
Confidence 00123333 3 3332 24999999999876665432100 0000 00000 000000 00110000
Q ss_pred -------CCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEec-CCCceEEEecCCeEEEEEcCCCCCeEEE
Q 017296 219 -------QGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDE-SCNGGISGGADQKIVLYNLDHSTGSCVI 290 (374)
Q Consensus 219 -------~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~s~s~D~~i~lwd~~~~~~~~~~ 290 (374)
.....+.....++.+++|++. .+...+..+.+++ ++..++++ ++.|.+||++.. +..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~--~~~- 288 (349)
T 1jmx_B 224 QDPATADLLYGYLSVDLKTGKTHTQEFA----------DLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQR--KLI- 288 (349)
T ss_dssp ---CCCEEEEEEEEEETTTCCEEEEEEE----------ECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTT--EEE-
T ss_pred CCccccccceeEEEEeccCCcEEecccc----------cCCCcceeeEecCCCCCEEEEE--cCeEEEEECccC--eEE-
Confidence 000011123334555555542 2455678899999 98887777 899999998653 222
Q ss_pred EEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEeccc
Q 017296 291 KKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH 339 (374)
Q Consensus 291 ~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h 339 (374)
..+.. ...+.+++|+|++++|++++.++.|++||..+++.+..++.+
T Consensus 289 -~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 289 -KAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp -EEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred -EEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 12222 234678999999998888888999999999999988877644
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.59 E-value=1.4e-14 Score=144.58 Aligned_cols=284 Identities=10% Similarity=0.081 Sum_probs=146.1
Q ss_pred CCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeece-eeeE--EeccCCccccceeeeccccC-------
Q 017296 17 HRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAA-HGIV--SVATGPSIGLNKVISQGRDG------- 86 (374)
Q Consensus 17 H~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~s~~~D~------- 86 (374)
+......++|+|+|.+|+++ |++|++||..++++...+.+|... ..+. .+.+++ |+++++.++.++
T Consensus 15 ~~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp--dg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 15 YRLKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP--DGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp SCCCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT--TSSEEEEEEEEEECSSSCE
T ss_pred ccccccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC--CCCEEEEEECCeeeEEEcc
Confidence 34456788999999999986 899999999998876555554321 1111 145565 778888888764
Q ss_pred --eEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceE
Q 017296 87 --TVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (374)
Q Consensus 87 --~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (374)
.+.+||+.+++.... . .... .. . .+ .+.++++ .+
T Consensus 91 ~~~~~~~d~~~~~~~~l---~--~~~~-----------~~-------------~----~~----------~~SPdG~-~l 126 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITE---E--RIPN-----------NT-------------Q----WV----------TWSPVGH-KL 126 (740)
T ss_dssp EEEEEEEETTTTEECCS---S--CCCT-----------TE-------------E----EE----------EECSSTT-CE
T ss_pred ceEEEEEECCCCcEEEc---c--cCCC-----------cc-------------e----ee----------EECCCCC-EE
Confidence 455999988742110 0 0000 00 0 00 1223333 34
Q ss_pred EEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCC-------CCceEEEEEecCCc-EEEE
Q 017296 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKS-------QGFVNVLAGYEDGS-ILVW 236 (374)
Q Consensus 165 ~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~gs~dg~-i~iw 236 (374)
+.+ .++.|.+||+.+++.. .+... +.... .+..... .+...-+.=|-||. |...
T Consensus 127 a~~--~~~~i~~~~~~~~~~~-~lt~~-----------g~~~~----~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 127 AYV--WNNDIYVKIEPNLPSY-RITWT-----------GKEDI----IYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp EEE--ETTEEEEESSTTSCCE-ECCSC-----------CBTTT----EEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred EEE--ECCeEEEEECCCCceE-EEcCC-----------CCccc----eecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 443 3699999998887632 22110 00000 0000000 00000122344554 3333
Q ss_pred eccCCCCceeeeec------CccCeEEEEEecCCCceEEEecCCeEEEEEcCC---CCC-eEEEEEe---eecCCCCeEE
Q 017296 237 DIRNPGIPLTAMKV------HLEPVLCLSIDESCNGGISGGADQKIVLYNLDH---STG-SCVIKKE---INLERPGISG 303 (374)
Q Consensus 237 dl~~~~~~~~~~~~------h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~---~~~-~~~~~~~---~~~~~~~v~~ 303 (374)
...........+.. +...+..+.+...+.. ..+.+|.+||++. .+. ....... ...+...+..
T Consensus 189 ~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~----~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 264 (740)
T 4a5s_A 189 QFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAV----NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCD 264 (740)
T ss_dssp EEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSC----CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEE
T ss_pred EEcccCCceEEEEeecCCCCCCCcceeecCCCCcCc----CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEE
Confidence 22221111111110 1122333333222210 1223688899875 421 1111100 0024456889
Q ss_pred EEECCCCCEEEEEeC----CCeEEEEEccCCe----EE--EEe--cccCCceE-----EEEEeCCCCEEE-EEe-CCC--
Q 017296 304 TSIRPDSKIAATAGW----DRRVRIYNYRKGS----AL--AIL--KYHHATCN-----AVSFSSDCKLMA-SAS-EDS-- 362 (374)
Q Consensus 304 ~~~sp~~~~l~s~~~----dg~v~iwd~~~~~----~~--~~~--~~h~~~v~-----~v~~sp~~~~la-s~s-~D~-- 362 (374)
++||||++.++.... +..|++||+.+++ +. .++ ..|...|. ..+|+|||+.|+ ..| .||
T Consensus 265 ~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~ 344 (740)
T 4a5s_A 265 VTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYR 344 (740)
T ss_dssp EEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCE
T ss_pred EEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCce
Confidence 999999997665432 3479999998887 22 122 45665554 789999999877 665 444
Q ss_pred cEEEecCC
Q 017296 363 TVALWELY 370 (374)
Q Consensus 363 ~v~~W~~~ 370 (374)
.|++|++.
T Consensus 345 ~l~~~~~~ 352 (740)
T 4a5s_A 345 HICYFQID 352 (740)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 46666654
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.53 E-value=2.3e-12 Score=126.75 Aligned_cols=290 Identities=12% Similarity=0.034 Sum_probs=162.2
Q ss_pred EEeecCCCceeEEEEeCCCCEEEEe--cCCCcEEEEeCcccceeeeeeeeeceeeeE---------EeccCCccccce-e
Q 017296 12 AVLRGHRASVTDVCFHQTKPILFAG--TTGGELRIWDTVQHRTVSSSWVHSAAHGIV---------SVATGPSIGLNK-V 79 (374)
Q Consensus 12 ~~l~gH~~~V~~l~~~~~~~~l~s~--s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~-l 79 (374)
..+.+|...|..++|++++-++++. +.++...||....+.....+..|.. .+. .+.++.++|+++ +
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~SPDg~~~l 94 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPW--NVRNRVFEYSGFPWAGVPRPAGGPLL 94 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTC--CBCCCGGGTCCCCEEEECCSSSSCEE
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCc--cccccccccCCccceeeeecCCCeEE
Confidence 4578999999999999887777777 7789999999543333333333321 122 333442236666 5
Q ss_pred eecc-ccCeEEEEecC--C-CCCCCCCceeeee-----cceeeeeeeeeccccccccccCCCCcccccccCceeecCCCC
Q 017296 80 ISQG-RDGTVKCWDIE--N-GGLSSNPSLTIKT-----NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLC 150 (374)
Q Consensus 80 ~s~~-~D~~vrvwd~~--~-~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (374)
+..+ .+..|.+|++. . +... .+.. ........
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~~~-----~l~~~~~~~~~~~~~~~---------------------------------- 135 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAVPR-----PLTPVSAVGGGLRWADP---------------------------------- 135 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCCCE-----ECSCCCCSTTCEEEEEE----------------------------------
T ss_pred EEEECCCCeEEEEcCCCCCCCCCE-----eccCCccCCCCccccCc----------------------------------
Confidence 5433 35566666654 2 3210 0000 00000000
Q ss_pred CCCCCCCCCCCceEEEcccC---------CCeEEEEecCC------CceeEEec-cCccCCCCCcCCCCCcceeEEEeee
Q 017296 151 DSKDDVPAEGPKYMAVAGEQ---------LSEVEIWDLNT------AERCTRLH-QNSCGGSPNFSSKGRGMCMAVQAYL 214 (374)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~---------d~~i~vWd~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (374)
.+.+++ +.++++... ..+|.+||+.+ ++. ..+. ... ..... ..+.
T Consensus 136 ----~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~------------~~~~~-~~~S 196 (662)
T 3azo_A 136 ----VLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAH------------RFVTG-PRLS 196 (662)
T ss_dssp ----EEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCS------------SEECC-CEEC
T ss_pred ----EECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCC------------CcccC-ceEC
Confidence 011233 333333321 14799999988 543 2222 110 00000 1133
Q ss_pred cCCCCCceEEEEEecC--------CcEEEEeccCCC---CceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCC
Q 017296 215 PSKSQGFVNVLAGYED--------GSILVWDIRNPG---IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDH 283 (374)
Q Consensus 215 ~~~~~~~~~~~~gs~d--------g~i~iwdl~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~ 283 (374)
+ ++. .|+.++.+ ..|.+||+...+ .......+|...+..+.|+|++..+++++.|+..+||.++.
T Consensus 197 p---DG~-~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~ 272 (662)
T 3azo_A 197 P---DGR-QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDP 272 (662)
T ss_dssp T---TSS-EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECT
T ss_pred C---CCC-EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEEC
Confidence 3 232 45555543 479999997323 33333445578899999999998667777888555554443
Q ss_pred CCCeEEEEEeeecCC--------CCeEEEEECCCCCEEEEEeCCCeEEEE--EccCCeEEEEecccCCceEEE-EEeCCC
Q 017296 284 STGSCVIKKEINLER--------PGISGTSIRPDSKIAATAGWDRRVRIY--NYRKGSALAILKYHHATCNAV-SFSSDC 352 (374)
Q Consensus 284 ~~~~~~~~~~~~~~~--------~~v~~~~~sp~~~~l~s~~~dg~v~iw--d~~~~~~~~~~~~h~~~v~~v-~~sp~~ 352 (374)
.++..... ...+. ..+..++|+|++++++++.. ++++|| |+..++ +..+..|...+..+ ++.++.
T Consensus 273 ~~~~~~~l--~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~s~~~~~ 348 (662)
T 3azo_A 273 ATGAATQL--CRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAATLTVSGTR 348 (662)
T ss_dssp TTCCEEES--SCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEEEEEETTE
T ss_pred CCCceeec--ccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEEEecCCCE
Confidence 23322211 11111 11567899999999999998 999999 554454 67788888778776 444333
Q ss_pred CEEEEEeCCCcEEEecC
Q 017296 353 KLMASASEDSTVALWEL 369 (374)
Q Consensus 353 ~~las~s~D~~v~~W~~ 369 (374)
-++++++.+...++|.+
T Consensus 349 ~~~~~~~~~~~~~i~~~ 365 (662)
T 3azo_A 349 AVGVAASPRTAYEVVEL 365 (662)
T ss_dssp EEEEEEETTEEEEEEEE
T ss_pred EEEEEcCCCCCCEEEEE
Confidence 35556677766666644
No 169
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.52 E-value=9.6e-13 Score=130.81 Aligned_cols=314 Identities=11% Similarity=-0.001 Sum_probs=166.6
Q ss_pred CCeEEeecCCC---ceeEEEEeCCCCEEEEecC---------CCcEEEEeCcccceeeeeeeeeceeeeEEeccCCcccc
Q 017296 9 DPVAVLRGHRA---SVTDVCFHQTKPILFAGTT---------GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGL 76 (374)
Q Consensus 9 ~~~~~l~gH~~---~V~~l~~~~~~~~l~s~s~---------D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (374)
++...+.+|.. .|.+++|||||++|++++. |++|++||+.+++.+...... ..+..++|+| |+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~SP--DG 121 (719)
T 1z68_A 47 QSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWSP--VG 121 (719)
T ss_dssp CEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SSBCCEEECS--ST
T ss_pred cEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---cccccceECC--CC
Confidence 44555556654 4999999999999998876 789999999888763111111 2356677887 67
Q ss_pred ceeeeccccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCC
Q 017296 77 NKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDV 156 (374)
Q Consensus 77 ~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (374)
++|+.+. |+.|++||+.+++... +. ...+...+ . .+.....+..+.... .....+
T Consensus 122 ~~la~~~-~~~i~~~~~~~g~~~~-----l~-~~~~~~~v--~---------~g~~~~v~~ee~~~~-------~~~~~w 176 (719)
T 1z68_A 122 SKLAYVY-QNNIYLKQRPGDPPFQ-----IT-FNGRENKI--F---------NGIPDWVYEEEMLAT-------KYALWW 176 (719)
T ss_dssp TCEEEEE-TTEEEEESSTTSCCEE-----CC-CCCBTTTE--E---------ESSCCHHHHHHTTCS-------SCCEEE
T ss_pred CEEEEEE-CCeEEEEeCCCCCcEE-----Ee-cCCCcCCe--E---------cccccceeeeecccC-------cccEEE
Confidence 8888774 7899999998874311 00 00000000 0 000000000000000 000001
Q ss_pred CCCCCceEEEcccC---------------------------------CCeEEEEecCCCcee--EEeccCccCCCCCcCC
Q 017296 157 PAEGPKYMAVAGEQ---------------------------------LSEVEIWDLNTAERC--TRLHQNSCGGSPNFSS 201 (374)
Q Consensus 157 ~~~~~~~~~~~~~~---------------------------------d~~i~vWd~~~~~~~--~~~~~~~~~~~~~~~~ 201 (374)
.+ +++++++++.. ..+|++||+.+++.. ..+.... .+..
T Consensus 177 SP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~-----~~~~ 250 (719)
T 1z68_A 177 SP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA-----MIAS 250 (719)
T ss_dssp CT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH-----HHHT
T ss_pred CC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCc-----cCCC
Confidence 12 22333332221 127889999887642 1221100 0000
Q ss_pred CCCcceeEEEeeecCCCCCceEEEEEecC----CcEEEEe----ccCCCCceeee----ecCccCeE-----EEEEecCC
Q 017296 202 KGRGMCMAVQAYLPSKSQGFVNVLAGYED----GSILVWD----IRNPGIPLTAM----KVHLEPVL-----CLSIDESC 264 (374)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~gs~d----g~i~iwd----l~~~~~~~~~~----~~h~~~v~-----~~~~~~~~ 264 (374)
.... .....+.++ + ..+++.... ..|.+|| +.+ +.....+ .+|...+. .+.|+|++
T Consensus 251 -~~~~-~~~~~~SpD---~-~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 251 -SDYY-FSWLTWVTD---E-RVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp -SCEE-EEEEEESSS---S-EEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEECSSSCSSSSSCCCCEECTTS
T ss_pred -Ccce-EEEeEEeCC---C-eEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEecccccCCceEccccCCccEECCCC
Confidence 0011 111234443 2 234443332 2488889 643 2222333 35666666 78899988
Q ss_pred CceEE--EecCC--eEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEEccC--Ce-E
Q 017296 265 NGGIS--GGADQ--KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRK--GS-A 332 (374)
Q Consensus 265 ~~~~s--~s~D~--~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----g~v~iwd~~~--~~-~ 332 (374)
..++. ...++ .|.+||++... . ..+..+...+..+.++ +++.|+..+.+ +++++|.+.. +. .
T Consensus 324 ~~l~~~~~~~~g~~~l~~~~~~~~~--~---~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~ 397 (719)
T 1z68_A 324 ISYYKIFSDKDGYKHIHYIKDTVEN--A---IQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPS 397 (719)
T ss_dssp SCEEEEEECTTSCEEEEEESSCSTT--C---EECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCC
T ss_pred CeEEEEEEccCCceEEEEEECCCCc--e---EecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCC
Confidence 86543 44555 56666664432 1 1222333456777777 77776655554 8899998754 32 1
Q ss_pred EEEec----ccCCceEEEEEeCCCCEEEE-EeCC--CcEEEecCCC
Q 017296 333 LAILK----YHHATCNAVSFSSDCKLMAS-ASED--STVALWELYP 371 (374)
Q Consensus 333 ~~~~~----~h~~~v~~v~~sp~~~~las-~s~D--~~v~~W~~~~ 371 (374)
...+. +|...+..+.|+||+++++. ++.+ ..+.+|++..
T Consensus 398 ~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~~~ 443 (719)
T 1z68_A 398 KKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDGRT 443 (719)
T ss_dssp EEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECSSS
T ss_pred ceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEECCC
Confidence 23333 26667889999999997664 4443 4677887744
No 170
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.52 E-value=1.6e-11 Score=108.42 Aligned_cols=262 Identities=12% Similarity=0.083 Sum_probs=155.3
Q ss_pred CCeEEeecCCCceeEEEEeCCCC-EEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCe
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKP-ILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGT 87 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~-~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~ 87 (374)
..+..+..+.....+++|+++|+ +++++..++.|.+||..++ +..+..+. .....+++++ +++.+++...++.
T Consensus 18 ~~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~--~~~~~l~~~~--dg~l~v~~~~~~~ 91 (296)
T 3e5z_A 18 AEARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPS--HHQNGHCLNK--QGHLIACSHGLRR 91 (296)
T ss_dssp CCCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSC--SSEEEEEECT--TCCEEEEETTTTE
T ss_pred CcEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCC--CCcceeeECC--CCcEEEEecCCCe
Confidence 45567777888889999999998 8889999999999998776 33333222 3356677766 5667777777789
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|.+||..+|+.. .+ ... ... . ... .+ ..+++
T Consensus 92 i~~~d~~~g~~~-----~~-~~~--------~~~-~----~~~--------~~---------------------~~i~~- 122 (296)
T 3e5z_A 92 LERQREPGGEWE-----SI-ADS--------FEG-K----KLN--------SP---------------------NDVCL- 122 (296)
T ss_dssp EEEECSTTCCEE-----EE-ECE--------ETT-E----ECC--------CC---------------------CCEEE-
T ss_pred EEEEcCCCCcEE-----EE-eec--------cCC-C----CCC--------CC---------------------CCEEE-
Confidence 999999776421 00 000 000 0 000 00 00010
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
..++.+-+=|...+.. . ... ... . ......+.|..+|.. + .+..
T Consensus 123 -d~~G~l~vtd~~~g~~-~-~~~-------~~~-------------------~----~~~~~~~~l~~~~~~--g-~~~~ 166 (296)
T 3e5z_A 123 -APDGSLWFSDPTYGID-K-PEE-------GYG-------------------G----EMELPGRWVFRLAPD--G-TLSA 166 (296)
T ss_dssp -CTTSCEEEEECSHHHH-C-GGG-------SSC-------------------C----CCCSSSCEEEEECTT--S-CEEE
T ss_pred -CCCCCEEEECCccccc-c-ccc-------ccc-------------------c----cccCCCcEEEEECCC--C-CEEE
Confidence 0112111100000000 0 000 000 0 000012234444432 2 2333
Q ss_pred eecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeE-EEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q 017296 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC-VIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 326 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd 326 (374)
+..+......+++++++..+++.+.++.|.+|+++. ++.. .....+..+......++++++|++.++. ++.|.+||
T Consensus 167 ~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~-~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~ 243 (296)
T 3e5z_A 167 PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA-RGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLT 243 (296)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS-SSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEEC
T ss_pred eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC-CCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEEC
Confidence 445566678899999998887788889999999862 2332 1111122233446689999999977766 88999999
Q ss_pred ccCCeEEEEecccCCceEEEEE-eCCCCEEEEEeCCCcEEE
Q 017296 327 YRKGSALAILKYHHATCNAVSF-SSDCKLMASASEDSTVAL 366 (374)
Q Consensus 327 ~~~~~~~~~~~~h~~~v~~v~~-sp~~~~las~s~D~~v~~ 366 (374)
.. ++.+..+..+.. +.+++| .|+++.|+.++.++..++
T Consensus 244 ~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 244 PD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp TT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred CC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 85 788888877777 999999 589998888888765443
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.48 E-value=1.9e-11 Score=111.32 Aligned_cols=141 Identities=11% Similarity=0.036 Sum_probs=97.5
Q ss_pred cCCcEEEEeccCCCCceeeee----cCccCeEEEEEecCCCceEEEe-cCCeEEEEEcCCCCCeEEEEEeeec--CCCCe
Q 017296 229 EDGSILVWDIRNPGIPLTAMK----VHLEPVLCLSIDESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINL--ERPGI 301 (374)
Q Consensus 229 ~dg~i~iwdl~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~~s~s-~D~~i~lwd~~~~~~~~~~~~~~~~--~~~~v 301 (374)
.+|++.+|++...+.....+. .+...+..+.|+|++..++++. .++.|++|+++. ++.......... +....
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~-~g~~~~~~~~~~~~~g~~p 195 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLA-SGEVELVGSVDAPDPGDHP 195 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECT-TSCEEEEEEEECSSTTCCE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECC-CCCEEEeeeEecCCCCCCC
Confidence 689999999974333222232 2456789999999998777665 478999999973 333332223332 24568
Q ss_pred EEEEECCCCCEEEEEeC-CCeEEEEEcc--CCeEE---EEe---cc----cCC------ceEEEE-EeCCCCEEEEEeCC
Q 017296 302 SGTSIRPDSKIAATAGW-DRRVRIYNYR--KGSAL---AIL---KY----HHA------TCNAVS-FSSDCKLMASASED 361 (374)
Q Consensus 302 ~~~~~sp~~~~l~s~~~-dg~v~iwd~~--~~~~~---~~~---~~----h~~------~v~~v~-~sp~~~~las~s~D 361 (374)
..++|+||++++++++. +++|.+|++. +++.. ..+ .. |.. .+..++ |+|||++|++++.+
T Consensus 196 ~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~ 275 (365)
T 1jof_A 196 RWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRA 275 (365)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEE
T ss_pred CEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCC
Confidence 89999999999887775 7899999875 45532 122 21 222 588999 99999988766543
Q ss_pred C------cEEEecCC
Q 017296 362 S------TVALWELY 370 (374)
Q Consensus 362 ~------~v~~W~~~ 370 (374)
. +|++|++.
T Consensus 276 ~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 276 NKFELQGYIAGFKLR 290 (365)
T ss_dssp SSTTSCCEEEEEEEC
T ss_pred CCCCCCCeEEEEEEC
Confidence 2 89999985
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.44 E-value=2.9e-11 Score=120.02 Aligned_cols=139 Identities=6% Similarity=-0.025 Sum_probs=93.1
Q ss_pred CCcEEEEeccC------CCCceeeeecCccCeEEEEEecCCCceEEEecC----CeEEEEEcCCCCC-eEEEEEeeecCC
Q 017296 230 DGSILVWDIRN------PGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLDHSTG-SCVIKKEINLER 298 (374)
Q Consensus 230 dg~i~iwdl~~------~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D----~~i~lwd~~~~~~-~~~~~~~~~~~~ 298 (374)
+..|.+||+.. +......+..+...+.. .+++++..++..+.+ ..|.+||++.... ... .+..+.
T Consensus 258 ~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~---~l~~~~ 333 (710)
T 2xdw_A 258 VNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWK---VLVPEH 333 (710)
T ss_dssp CCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCE---EEECCC
T ss_pred ccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccce---eccCCC
Confidence 56888999864 32234556666666554 366666666655543 3699999865421 111 111222
Q ss_pred --CCeEEEEECCCCCEEEEEeCCCe--EEEEEccCCeEEEEecccCCceEEEEEeCCCCEEE-EE---eCCCcEEEecCC
Q 017296 299 --PGISGTSIRPDSKIAATAGWDRR--VRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMA-SA---SEDSTVALWELY 370 (374)
Q Consensus 299 --~~v~~~~~sp~~~~l~s~~~dg~--v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~la-s~---s~D~~v~~W~~~ 370 (374)
..+..++|++++.+++++..|+. |.+||+.+++.+..+..+.+.+..++++|+++.|+ +. ...++|.+||+.
T Consensus 334 ~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 413 (710)
T 2xdw_A 334 EKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLT 413 (710)
T ss_dssp SSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETT
T ss_pred CCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECC
Confidence 25778899988888999999985 55567767887778888888899999999997655 32 345789999885
Q ss_pred CC
Q 017296 371 PP 372 (374)
Q Consensus 371 ~~ 372 (374)
.+
T Consensus 414 tg 415 (710)
T 2xdw_A 414 KE 415 (710)
T ss_dssp SS
T ss_pred CC
Confidence 43
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.39 E-value=1.6e-09 Score=96.96 Aligned_cols=245 Identities=9% Similarity=0.075 Sum_probs=141.9
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeecccc---
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRD--- 85 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D--- 85 (374)
++...+.+|...+.+++|+++|++++++..++.|.+||..+++.......+ ...+..+++++ +++.+++...+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~i~~~~--dg~l~v~~~~~~~~ 110 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSH--KANPAAIKIHK--DGRLFVCYLGDFKS 110 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECS--SSSEEEEEECT--TSCEEEEECTTSSS
T ss_pred ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCC--CCCcceEEECC--CCcEEEEeCCCCCC
Confidence 345667788888899999999998889999999999998877643322111 23466677765 45666666555
Q ss_pred -CeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceE
Q 017296 86 -GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (374)
Q Consensus 86 -~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (374)
+.|.+||..++... .+ ..... .. ....
T Consensus 111 ~~~i~~~d~~~~~~~-----~~------------~~~~~----------------~~-------------------~~~~ 138 (333)
T 2dg1_A 111 TGGIFAATENGDNLQ-----DI------------IEDLS----------------TA-------------------YCID 138 (333)
T ss_dssp CCEEEEECTTSCSCE-----EE------------ECSSS----------------SC-------------------CCEE
T ss_pred CceEEEEeCCCCEEE-----EE------------EccCc----------------cC-------------------Cccc
Confidence 67888887665310 00 00000 00 0000
Q ss_pred EEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEec------CCcEEEEec
Q 017296 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE------DGSILVWDI 238 (374)
Q Consensus 165 ~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~------dg~i~iwdl 238 (374)
.++-..++. .+++... .+.|..||.
T Consensus 139 ~i~~d~~g~-------------------------------------------------l~v~~~~~~~~~~~~~l~~~~~ 169 (333)
T 2dg1_A 139 DMVFDSKGG-------------------------------------------------FYFTDFRGYSTNPLGGVYYVSP 169 (333)
T ss_dssp EEEECTTSC-------------------------------------------------EEEEECCCBTTBCCEEEEEECT
T ss_pred ceEECCCCC-------------------------------------------------EEEEeccccccCCCceEEEEeC
Confidence 000000010 0111111 123333333
Q ss_pred cCCCCceeeeecCccCeEEEEEecCCCce-EEEecCCeEEEEEcCCCCCeE-EEEEe--eecC-CCCeEEEEECCCCCEE
Q 017296 239 RNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSC-VIKKE--INLE-RPGISGTSIRPDSKIA 313 (374)
Q Consensus 239 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~s~s~D~~i~lwd~~~~~~~~-~~~~~--~~~~-~~~v~~~~~sp~~~~l 313 (374)
.. .....+..+...+..+.+++++..+ ++.+.++.|.+||++...... .+... .... ......+++++++++.
T Consensus 170 ~~--~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~ 247 (333)
T 2dg1_A 170 DF--RTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLY 247 (333)
T ss_dssp TS--CCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEE
T ss_pred CC--CEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEE
Confidence 21 1122222233456788999988755 455668899999986321111 11111 1111 1357789999999988
Q ss_pred EEEeCCCeEEEEEccCCeEEEEecccCC------ceEEEEEeCCCCEEEEEeCC
Q 017296 314 ATAGWDRRVRIYNYRKGSALAILKYHHA------TCNAVSFSSDCKLMASASED 361 (374)
Q Consensus 314 ~s~~~dg~v~iwd~~~~~~~~~~~~h~~------~v~~v~~sp~~~~las~s~D 361 (374)
++...++.|.+||. +++.+..+..+.. .+.+++|+||++.|+.++.+
T Consensus 248 v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 248 VAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 88888899999998 5676666654433 68999999998766544433
No 174
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.38 E-value=2.5e-11 Score=120.27 Aligned_cols=122 Identities=7% Similarity=-0.075 Sum_probs=77.0
Q ss_pred eeeecCccCeEEEEEecCCCceEEEe----cCCeEEEEEcCCCCCe--EEEEEeeecCCCCeEEEEECCCCCEEEEEeCC
Q 017296 246 TAMKVHLEPVLCLSIDESCNGGISGG----ADQKIVLYNLDHSTGS--CVIKKEINLERPGISGTSIRPDSKIAATAGWD 319 (374)
Q Consensus 246 ~~~~~h~~~v~~~~~~~~~~~~~s~s----~D~~i~lwd~~~~~~~--~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d 319 (374)
..+..+...+....+ +++. ++..+ .++.|.+||++..... ..+.. ..+...+..++|+ +++++++...|
T Consensus 265 ~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~--~~~~~~l~~~~~~-~~~lv~~~~~d 339 (695)
T 2bkl_A 265 RLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVP--EDSSASLLSVSIV-GGHLSLEYLKD 339 (695)
T ss_dssp EEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEEC--CCSSCEEEEEEEE-TTEEEEEEEET
T ss_pred EEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEec--CCCCCeEEEEEEE-CCEEEEEEEEC
Confidence 334444444444444 3344 43333 3578999998654310 11111 1113347778888 77889999999
Q ss_pred CeEEEEEcc-CCeEEEEeccc-CCceEEEEEeCCCCEEE----EEeCCCcEEEecCCCC
Q 017296 320 RRVRIYNYR-KGSALAILKYH-HATCNAVSFSSDCKLMA----SASEDSTVALWELYPP 372 (374)
Q Consensus 320 g~v~iwd~~-~~~~~~~~~~h-~~~v~~v~~sp~~~~la----s~s~D~~v~~W~~~~~ 372 (374)
+..+||.+. +++....+..+ ...+..++++|+++.|+ +...+++|++||+..+
T Consensus 340 g~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g 398 (695)
T 2bkl_A 340 ATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTG 398 (695)
T ss_dssp TEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTC
T ss_pred CEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 999998765 46666666655 56788889999998766 3334678999998643
No 175
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.36 E-value=4.7e-10 Score=97.21 Aligned_cols=141 Identities=11% Similarity=0.004 Sum_probs=94.2
Q ss_pred EecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEE
Q 017296 227 GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSI 306 (374)
Q Consensus 227 gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 306 (374)
...++.|..||..... ...........+..+++++++..+++...++.|.+||.+... .. ............+++
T Consensus 125 ~~~~~~i~~~~~~~~~-~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~--~~--~~~~~~~~~p~~i~~ 199 (270)
T 1rwi_B 125 DRGNNRVVKLAAGSKT-QTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN--QV--VLPFTDITAPWGIAV 199 (270)
T ss_dssp EGGGTEEEEECTTCCS-CEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC--EE--ECCCSSCCSEEEEEE
T ss_pred ECCCCEEEEEECCCce-eEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc--eE--eecccCCCCceEEEE
Confidence 3445566666543211 111111223456778888888766666678899999876432 11 111112245789999
Q ss_pred CCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 307 RPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 307 sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
+|++.+.++...++.|.+||............+...+.++++.|+|+++++.+.++.|+++++..+
T Consensus 200 d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 200 DEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp CTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGG
T ss_pred CCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCc
Confidence 999988887778899999998654433322234467899999999999999999999999998654
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.36 E-value=3.2e-10 Score=102.10 Aligned_cols=162 Identities=10% Similarity=0.030 Sum_probs=98.3
Q ss_pred CeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecC------C-cEEEEeccCCCCc
Q 017296 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED------G-SILVWDIRNPGIP 244 (374)
Q Consensus 172 ~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d------g-~i~iwdl~~~~~~ 244 (374)
..|.+||+.+++.+..+... . ... ..+.++ + .++++..+ . ...+|.+. .+.
T Consensus 152 ~~l~~~d~~~~~~~~~l~~~-~-----------~~~---~~~spd---g--~~~~~~~~~~~~~~~~~~~l~~~d-~~~- 209 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEKP-R-----------FSS---GIWHRD---K--IVVNVPHREIIPQYFKFWDIYIWE-DGK- 209 (347)
T ss_dssp EEEEEEETTTTEEEEEEEEE-T-----------TCE---EEEETT---E--EEEEEECCCSSCCSSCCEEEEEEE-TTE-
T ss_pred ceEEEEECCCCeEEeeecCC-C-----------ccc---ccCCCC---e--EEEEEecccccccccccccEEEeC-CCc-
Confidence 57999999988753333221 0 000 112222 2 35555443 2 45666555 332
Q ss_pred eeeeecCccCeEEEEEecCCCceEEEecCC--------eEEEEEcCCCCCeEEEEEeeecCCCCeEE-EEECCCCCEEEE
Q 017296 245 LTAMKVHLEPVLCLSIDESCNGGISGGADQ--------KIVLYNLDHSTGSCVIKKEINLERPGISG-TSIRPDSKIAAT 315 (374)
Q Consensus 245 ~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~--------~i~lwd~~~~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~l~s 315 (374)
...+..+ ..+..+ +|++..++..+.++ .|.+|| ++... .....+...+.. +.|+ |+ ++++
T Consensus 210 ~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d----~~~~~--~l~~~~~~~~~~~~~~s-dg-~~~~ 278 (347)
T 2gop_A 210 EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD----GKEVM--GILDEVDRGVGQAKIKD-GK-VYFT 278 (347)
T ss_dssp EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC----SSCEE--ESSTTCCSEEEEEEEET-TE-EEEE
T ss_pred eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC----CCceE--eccccCCcccCCccEEc-Cc-EEEE
Confidence 3334444 455544 78888887776543 566666 22221 112223345665 8999 88 8899
Q ss_pred EeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcE-EEecCC
Q 017296 316 AGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTV-ALWELY 370 (374)
Q Consensus 316 ~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v-~~W~~~ 370 (374)
++.++.++|| +.+++.. .+..+...|.+++|+| +++++++.++.. +||.+.
T Consensus 279 ~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 279 LFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEETTEEEEE-EESSSEE-EEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred EecCCcEEEE-EcCCceE-EEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 9999999999 8866654 3444678899999999 777777777765 788653
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.35 E-value=3.3e-09 Score=101.83 Aligned_cols=286 Identities=15% Similarity=0.056 Sum_probs=170.6
Q ss_pred CCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecC--CCCCCCCCcee
Q 017296 28 QTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIE--NGGLSSNPSLT 105 (374)
Q Consensus 28 ~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~--~~~~~~~~~~~ 105 (374)
+.+.++++...+++|.++|..+++.+..+...... ..+.+++ +++++++++.|+.|.+||+. +++.. ..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p---~~v~~Sp--DGr~lyv~~~dg~V~viD~~~~t~~~v----~~ 235 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAV---HISRLSA--SGRYLFVIGRDGKVNMIDLWMKEPTTV----AE 235 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCE---EEEEECT--TSCEEEEEETTSEEEEEETTSSSCCEE----EE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCc---cceEECC--CCCEEEEEcCCCeEEEEECCCCCCcEe----EE
Confidence 44567888899999999999998877766543222 2456766 67888888999999999995 44211 11
Q ss_pred eeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCC---CCCceEEEcccCCCeEEEEecCCC
Q 017296 106 IKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPA---EGPKYMAVAGEQLSEVEIWDLNTA 182 (374)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d~~i~vWd~~~~ 182 (374)
+..... +.. . .+++ +++++++++...++++.++|..+.
T Consensus 236 i~~G~~----------P~~------------------i-----------a~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 236 IKIGSE----------ARS------------------I-----------ETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp EECCSE----------EEE------------------E-----------EECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred EecCCC----------Cce------------------e-----------EEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 111100 000 0 0111 245677777777899999999998
Q ss_pred ceeEEeccCccC-CCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEe
Q 017296 183 ERCTRLHQNSCG-GSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSID 261 (374)
Q Consensus 183 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~ 261 (374)
+.+..+.-.... ....+.+..+ ...+ ...+ .+...++.-..+|.|.++|..........-.........+.|+
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~r--va~i-~~s~---~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~ 350 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPR--VAAI-LASH---YRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLD 350 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCC--EEEE-EECS---SSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEEC
T ss_pred cEEEEEeccccccccccccCCCc--eEEE-EEcC---CCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceEC
Confidence 877665422110 0000000101 1111 1111 2233455567789999999865322111111233456678899
Q ss_pred cCCCceEEEe-cCCeEEEEEcCCCCCeEEEEEee-e--cCC-CCeEEEEECCCCCE-EEEEe-CCCeEEEEEccC-----
Q 017296 262 ESCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEI-N--LER-PGISGTSIRPDSKI-AATAG-WDRRVRIYNYRK----- 329 (374)
Q Consensus 262 ~~~~~~~s~s-~D~~i~lwd~~~~~~~~~~~~~~-~--~~~-~~v~~~~~sp~~~~-l~s~~-~dg~v~iwd~~~----- 329 (374)
+++.+++.+. .++.|.++|++.. +....... . -|. .++. -++|++.. .+++. .+++|.++|..+
T Consensus 351 pdgr~~~va~~~sn~V~ViD~~t~--kl~~~i~vgg~~Phpg~g~~--~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~ 426 (567)
T 1qks_A 351 GSHRYFITAANARNKLVVIDTKEG--KLVAIEDTGGQTPHPGRGAN--FVHPTFGPVWATSHMGDDSVALIGTDPEGHPD 426 (567)
T ss_dssp TTSCEEEEEEGGGTEEEEEETTTT--EEEEEEECSSSSBCCTTCEE--EEETTTEEEEEEEBSSSSEEEEEECCTTTCTT
T ss_pred CCCCEEEEEeCCCCeEEEEECCCC--cEEEEEeccCcCCCCcccee--eECCCCCcEEEeCCCCCCeEEEecCCCCCCcc
Confidence 9999886655 6789999998743 32221122 1 111 1222 26887544 44443 468999999987
Q ss_pred --CeEEEEecccCCceEEEEEeCCCCEEEEEeC-------CCcEEEecCCC
Q 017296 330 --GSALAILKYHHATCNAVSFSSDCKLMASASE-------DSTVALWELYP 371 (374)
Q Consensus 330 --~~~~~~~~~h~~~v~~v~~sp~~~~las~s~-------D~~v~~W~~~~ 371 (374)
-+.++++......-..+..+||+++|..... ...|.++|+..
T Consensus 427 ~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~ 477 (567)
T 1qks_A 427 NAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKA 477 (567)
T ss_dssp TBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGG
T ss_pred ccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCc
Confidence 4567777655444455788999997776542 35899998753
No 178
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.33 E-value=2e-08 Score=87.98 Aligned_cols=284 Identities=5% Similarity=-0.062 Sum_probs=163.2
Q ss_pred EeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEe
Q 017296 13 VLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWD 92 (374)
Q Consensus 13 ~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd 92 (374)
.+..+...+.+|+++++|.+.++...++.|.+||.. ++. ..+...........+++++ +++..++...++.|..||
T Consensus 9 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~-~~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 9 NLTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI-TEYPLPTPDAKVMCLTISS--DGEVWFTENAANKIGRIT 84 (299)
T ss_dssp ECCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE-EEEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEEC
T ss_pred cCCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe-EEecCCcccCceeeEEECC--CCCEEEeCCCCCeEEEEC
Confidence 344566789999999999988887778999999987 543 2222111123355666665 456667766688899998
Q ss_pred cCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCC
Q 017296 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLS 172 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 172 (374)
.. ++. .... . +.. . . .+.... + .+++. +.++...++
T Consensus 85 ~~-g~~-----~~~~-----------~--~~~----~---~-----~~~~i~-----------~-~~~g~-l~v~~~~~~ 120 (299)
T 2z2n_A 85 KK-GII-----KEYT-----------L--PNP----D---S-----APYGIT-----------E-GPNGD-IWFTEMNGN 120 (299)
T ss_dssp TT-SCE-----EEEE-----------C--SST----T---C-----CEEEEE-----------E-CTTSC-EEEEETTTT
T ss_pred CC-CcE-----EEEe-----------C--CCc----C---C-----CceeeE-----------E-CCCCC-EEEEecCCc
Confidence 75 321 0000 0 000 0 0 000000 0 11122 333444457
Q ss_pred eEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCc
Q 017296 173 EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHL 252 (374)
Q Consensus 173 ~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~ 252 (374)
.|..||. +++........ .......++ + + ..+. ..++...++.|..||. +.......+....
T Consensus 121 ~i~~~d~-~g~~~~~~~~~---------~~~~~~~i~---~--~-~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~ 182 (299)
T 2z2n_A 121 RIGRITD-DGKIREYELPN---------KGSYPSFIT---L--G-SDNA-LWFTENQNNAIGRITE-SGDITEFKIPTPA 182 (299)
T ss_dssp EEEEECT-TCCEEEEECSS---------TTCCEEEEE---E--C-TTSC-EEEEETTTTEEEEECT-TCCEEEEECSSTT
T ss_pred eEEEECC-CCCEEEecCCC---------CCCCCceEE---E--c-CCCC-EEEEeCCCCEEEEEcC-CCcEEEeeCCCCC
Confidence 8999998 55432211100 000111111 1 1 1232 3444556789999998 3222111122344
Q ss_pred cCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeE
Q 017296 253 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA 332 (374)
Q Consensus 253 ~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~ 332 (374)
..+..+.+++++...++...++.|..||. .. .... .........+.+++++|++++.++...++.|.+||. +++.
T Consensus 183 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g--~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~ 257 (299)
T 2z2n_A 183 SGPVGITKGNDDALWFVEIIGNKIGRITT-SG--EITE-FKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII 257 (299)
T ss_dssp CCEEEEEECTTSSEEEEETTTTEEEEECT-TC--CEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE
T ss_pred CcceeEEECCCCCEEEEccCCceEEEECC-CC--cEEE-EECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCce
Confidence 56889999988875566666889999987 22 2221 112223356889999999997777667899999998 4553
Q ss_pred EE-EecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 333 LA-ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 333 ~~-~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
.. .+..+...+.++++ ++|++.++.+.++.++ ++.
T Consensus 258 ~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~-~~~ 293 (299)
T 2z2n_A 258 EEYPIQIKSAEPHGICF-DGETIWFAMECDKIGK-LTL 293 (299)
T ss_dssp EEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEE-EEE
T ss_pred EEEeCCCCCCccceEEe-cCCCEEEEecCCcEEE-EEc
Confidence 32 23345578999999 9999877766554444 443
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.27 E-value=1.5e-10 Score=115.57 Aligned_cols=183 Identities=10% Similarity=0.079 Sum_probs=118.4
Q ss_pred CCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecC---------CcEEEEeccCC
Q 017296 171 LSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED---------GSILVWDIRNP 241 (374)
Q Consensus 171 d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d---------g~i~iwdl~~~ 241 (374)
|++|++||+.+++....+..+... .+ .....-..++|+ + ..++.++.+ +.+.+||+.+.
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~---~~-----~~~~~~~~~Spd---g-~~l~~~~~~~~~~r~~~~~~~~~~d~~~~ 102 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFD---EF-----GHSINDYSISPD---G-QFILLEYNYVKQWRHSYTASYDIYDLNKR 102 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTT---TC-----CSCCCEEEECTT---S-SEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred CCcEEEEECCCCceEEEEechhhh---hh-----cccccceEECCC---C-CEEEEEECCeeeEEEccceEEEEEECCCC
Confidence 789999999999876555432110 00 000000123332 3 246666665 56779999753
Q ss_pred CCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCC-----------------CCeEEE
Q 017296 242 GIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER-----------------PGISGT 304 (374)
Q Consensus 242 ~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~-----------------~~v~~~ 304 (374)
....+..|...+...+|+|++..++.+ .|+.|.+|++.......+ ....+. ....++
T Consensus 103 --~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~l---t~~g~~~~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 103 --QLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRI---TWTGKEDIIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp --EECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEEC---CSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred --cEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEE---cCCCCccceecCcccccccchhcCCCcce
Confidence 244566778889999999999988877 578999999875432211 011111 112358
Q ss_pred EECCCCCEEEEEeCCC------------------------------------eEEEEEccC---Ce--EEEEec------
Q 017296 305 SIRPDSKIAATAGWDR------------------------------------RVRIYNYRK---GS--ALAILK------ 337 (374)
Q Consensus 305 ~~sp~~~~l~s~~~dg------------------------------------~v~iwd~~~---~~--~~~~~~------ 337 (374)
.|||||++||.++.|. ++++||+.+ ++ ....+.
T Consensus 177 ~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~ 256 (740)
T 4a5s_A 177 WWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASML 256 (740)
T ss_dssp EECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHH
T ss_pred EECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCC
Confidence 8999999999876432 578899988 62 222343
Q ss_pred ccCCceEEEEEeCCCCEEEEEe----CCCcEEEecCCC
Q 017296 338 YHHATCNAVSFSSDCKLMASAS----EDSTVALWELYP 371 (374)
Q Consensus 338 ~h~~~v~~v~~sp~~~~las~s----~D~~v~~W~~~~ 371 (374)
+|...+..++|+|||+.++... .+..|++||+..
T Consensus 257 ~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t 294 (740)
T 4a5s_A 257 IGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE 294 (740)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET
T ss_pred CCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC
Confidence 3778899999999999766542 344799998754
No 180
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.27 E-value=3.1e-09 Score=95.24 Aligned_cols=265 Identities=9% Similarity=0.001 Sum_probs=152.9
Q ss_pred cCCCcEEEEeCcccceeeeeee----eeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeeeccee
Q 017296 37 TTGGELRIWDTVQHRTVSSSWV----HSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKTNSYH 112 (374)
Q Consensus 37 s~D~~v~vWd~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~~~~~ 112 (374)
+.+++|.++|..+++....+.. .........+.+. ++...++...+++|.+||..+++... .+..
T Consensus 14 ~~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~---~~~lyv~~~~~~~v~viD~~t~~~~~----~i~~---- 82 (328)
T 3dsm_A 14 YSNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR---DGIGWIVVNNSHVIFAIDINTFKEVG----RITG---- 82 (328)
T ss_dssp SCCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE---TTEEEEEEGGGTEEEEEETTTCCEEE----EEEC----
T ss_pred CCCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE---CCEEEEEEcCCCEEEEEECcccEEEE----EcCC----
Confidence 4589999999998875543311 0000111223332 23455666678999999998874311 1100
Q ss_pred eeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCc
Q 017296 113 FCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNS 192 (374)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~ 192 (374)
...+... . +.++ .+ +.++...++.|.+||+++++....+....
T Consensus 83 ------~~~p~~i------------------~-----------~~~~-g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~ 125 (328)
T 3dsm_A 83 ------FTSPRYI------------------H-----------FLSD-EK-AYVTQIWDYRIFIINPKTYEITGYIECPD 125 (328)
T ss_dssp ------CSSEEEE------------------E-----------EEET-TE-EEEEEBSCSEEEEEETTTTEEEEEEECTT
T ss_pred ------CCCCcEE------------------E-----------EeCC-Ce-EEEEECCCCeEEEEECCCCeEEEEEEcCC
Confidence 0000000 0 0011 22 33333357899999999988766554221
Q ss_pred cCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEe-cCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEe
Q 017296 193 CGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGY-EDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG 271 (374)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs-~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s 271 (374)
... .......+. . .+...+++.. .++.|.++|+++. .....+.. ......+.+++++..++++.
T Consensus 126 ~~~---~~~~p~~i~--~--------~~~~lyv~~~~~~~~v~viD~~t~-~~~~~i~~-g~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 126 MDM---ESGSTEQMV--Q--------YGKYVYVNCWSYQNRILKIDTETD-KVVDELTI-GIQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp CCT---TTCBCCCEE--E--------ETTEEEEEECTTCCEEEEEETTTT-EEEEEEEC-SSCBCCCEECTTSEEEEEBC
T ss_pred ccc---cCCCcceEE--E--------ECCEEEEEcCCCCCEEEEEECCCC-eEEEEEEc-CCCccceEEcCCCCEEEEEC
Confidence 000 000111111 1 1222344444 4899999999763 33334433 23446788898887666655
Q ss_pred cC----------CeEEEEEcCCCCCeEEEEEeeecC-CCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEE--Eecc
Q 017296 272 AD----------QKIVLYNLDHSTGSCVIKKEINLE-RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA--ILKY 338 (374)
Q Consensus 272 ~D----------~~i~lwd~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~~ 338 (374)
.+ +.|.++|.+.. +.. ..+... ......++|+|+++.|..+.. +|.+||..+++... .+..
T Consensus 191 ~~~~~~~~~~~~~~v~~id~~t~--~v~--~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~ 264 (328)
T 3dsm_A 191 GGYEGSPYGYEAPSLYRIDAETF--TVE--KQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEF 264 (328)
T ss_dssp CBCTTCSSCBCCCEEEEEETTTT--EEE--EEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCC
T ss_pred CCccCCccccCCceEEEEECCCC--eEE--EEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecC
Confidence 54 78999987643 322 222221 235789999999998877654 99999998877532 1222
Q ss_pred cCCceEEEEEeC-CCCEEEEE----eCCCcEEEecCC
Q 017296 339 HHATCNAVSFSS-DCKLMASA----SEDSTVALWELY 370 (374)
Q Consensus 339 h~~~v~~v~~sp-~~~~las~----s~D~~v~~W~~~ 370 (374)
+......++++| ++++.++. ..++.|.+|+..
T Consensus 265 ~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 265 RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 246788999999 56677776 678999999875
No 181
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.26 E-value=4.5e-09 Score=91.71 Aligned_cols=100 Identities=6% Similarity=-0.072 Sum_probs=75.5
Q ss_pred CeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEE
Q 017296 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSAL 333 (374)
Q Consensus 254 ~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~ 333 (374)
....+++.+++..+++...++.|..||.+ ++....... . ....++.+.+++.++++++.+++|..+|..+|+.+
T Consensus 126 ~~~~v~~~~~G~~lv~~~~~~~v~~~d~~---G~~~w~~~~--~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 126 QFRQINKNKKGNYLVPLFATSEVREIAPN---GQLLNSVKL--S-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp SCSCCEECTTSCEEEEETTTTEEEEECTT---SCEEEEEEC--S-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred cccCceECCCCCEEEEecCCCEEEEECCC---CCEEEEEEC--C-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 34445677888888899999999999975 333333222 1 23556788999999998888889999999999999
Q ss_pred EEecccC------CceEEEEEeCCCCEEEEEe
Q 017296 334 AILKYHH------ATCNAVSFSSDCKLMASAS 359 (374)
Q Consensus 334 ~~~~~h~------~~v~~v~~sp~~~~las~s 359 (374)
..+..+. ..+..++..++|..+++.+
T Consensus 200 w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 200 RRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 8886442 2378888999999888774
No 182
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.24 E-value=4.6e-09 Score=95.15 Aligned_cols=283 Identities=13% Similarity=0.070 Sum_probs=166.2
Q ss_pred EEEEeCCCCEEEEecC-----CCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeecc----------ccCe
Q 017296 23 DVCFHQTKPILFAGTT-----GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGT 87 (374)
Q Consensus 23 ~l~~~~~~~~l~s~s~-----D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~D~~ 87 (374)
.....|+++.++.... ++.|.+.|..+++.+..+...... . +.+++ ++++++.+. .+++
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~--va~sp--DG~~lyVan~~~~r~~~G~~~~~ 110 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--N--PVVAD--DGSFIAHASTVFSRIARGERTDY 110 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--E--EEECT--TSSCEEEEEEEEEETTEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--c--EEECC--CCCEEEEEcccccccccCCCCCE
Confidence 3456789988887765 679999999998887776543322 2 56666 567666554 4678
Q ss_pred EEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEc
Q 017296 88 VKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVA 167 (374)
Q Consensus 88 vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (374)
|.+||..+++... .+... ..... .. ...+... .+.+++ +++.++
T Consensus 111 VsviD~~t~~v~~----~I~v~----------~g~r~---~~-------g~~P~~~-----------a~spDG-k~lyVa 154 (386)
T 3sjl_D 111 VEVFDPVTLLPTA----DIELP----------DAPRF---LV-------GTYPWMT-----------SLTPDG-KTLLFY 154 (386)
T ss_dssp EEEECTTTCCEEE----EEEET----------TCCCC---CB-------SCCGGGE-----------EECTTS-SEEEEE
T ss_pred EEEEECCCCeEEE----EEECC----------Ccccc---cc-------CCCCceE-----------EEcCCC-CEEEEE
Confidence 9999998864211 11000 00000 00 0000000 122333 444444
Q ss_pred cc-CCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee
Q 017296 168 GE-QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT 246 (374)
Q Consensus 168 ~~-~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~ 246 (374)
.. .++.|.++|+++++.+.++.-.. |..+ .+ .+...+++.+.||.+.+.++...+....
T Consensus 155 n~~~~~~VsVID~~t~~vv~tI~v~g--------------~~~~---~P---~g~~~~~~~~~DG~~~~v~~~~~g~v~~ 214 (386)
T 3sjl_D 155 QFSPAPAVGVVDLEGKAFKRMLDVPD--------------CYHI---FP---TAPDTFFMHCRDGSLAKVAFGTEGTPEI 214 (386)
T ss_dssp ECSSSCEEEEEETTTTEEEEEEECCS--------------EEEE---EE---EETTEEEEEETTSCEEEEECCSSSCCEE
T ss_pred EcCCCCeEEEEECCCCcEEEEEECCC--------------ccee---ec---CCCceeEEECCCCCEEEEECCCCCeEEE
Confidence 33 36799999999999887774321 1111 11 1112466788899999999865333222
Q ss_pred eeecCc----cCeE-EEEEe-cCCCceEEEecCCeEEEEEcCCCCCeEEEEEeee----------cCCCCeEEEEECCCC
Q 017296 247 AMKVHL----EPVL-CLSID-ESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN----------LERPGISGTSIRPDS 310 (374)
Q Consensus 247 ~~~~h~----~~v~-~~~~~-~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~----------~~~~~v~~~~~sp~~ 310 (374)
....+. .++. ...|+ +++. ++-.+.+|++.+.|+........ ..+. ....+...++++|++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~dG~-~~~vs~~g~V~v~d~~~~~~~v~--~~~~~~~~~~~~~g~~p~g~q~~a~~~~~ 291 (386)
T 3sjl_D 215 THTEVFHPEDEFLINHPAYSQKAGR-LVWPTYTGKIHQIDLSSGDAKFL--PAVEALTEAERADGWRPGGWQQVAYHRAL 291 (386)
T ss_dssp EECCCCSCTTSCBCSCCEEETTTTE-EEEEBTTSEEEEEECTTSSCEEC--CCEESSCHHHHHTTEEECSSSCEEEETTT
T ss_pred eecceeccccccccccceeEcCCCc-EEEEeCCCEEEEEECCCCcceee--cceeccccccccccccCCCcceeeECCCC
Confidence 111111 2222 13444 3443 44466689999999865432211 1111 001233457889998
Q ss_pred CEEEEEeC----------CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCC-EEEE-EeCCCcEEEecCCC
Q 017296 311 KIAATAGW----------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMAS-ASEDSTVALWELYP 371 (374)
Q Consensus 311 ~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las-~s~D~~v~~W~~~~ 371 (374)
+.+..+.. .++|.+.|..+++.++.+.-. ..+++++|+||++ +|.+ ...++.|.++|...
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 87765532 257999999999988877632 3688999999997 5555 45699999999754
No 183
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.22 E-value=5e-09 Score=93.71 Aligned_cols=134 Identities=11% Similarity=0.073 Sum_probs=81.0
Q ss_pred CcEEEEeccCCCCceeeee--cCccCeEEEEEecCCCceEEEecC----CeEEEEEcCCCCCeEEEEEeeecCCCCeEEE
Q 017296 231 GSILVWDIRNPGIPLTAMK--VHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLDHSTGSCVIKKEINLERPGISGT 304 (374)
Q Consensus 231 g~i~iwdl~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~s~s~D----~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~ 304 (374)
+.|.+||.+.... ...+. .+...+..+.+++++..+++...+ ....+|.++..++....... .......+
T Consensus 112 ~~i~~~d~~~~~~-~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~i 187 (333)
T 2dg1_A 112 GGIFAATENGDNL-QDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ---NISVANGI 187 (333)
T ss_dssp CEEEEECTTSCSC-EEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE---EESSEEEE
T ss_pred ceEEEEeCCCCEE-EEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec---CCCcccce
Confidence 4566666543221 11111 234567888898888765555431 23444444433322221111 11246789
Q ss_pred EECCCCCEE-EEEeCCCeEEEEEccC-CeEEEE--------ecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 305 SIRPDSKIA-ATAGWDRRVRIYNYRK-GSALAI--------LKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 305 ~~sp~~~~l-~s~~~dg~v~iwd~~~-~~~~~~--------~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
+|+|++++| ++...++.|.+||+.+ ++.+.. +.++ ..+..+++.++|+++++...++.|.+|+.
T Consensus 188 ~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 188 ALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred EECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 999999865 4555689999999963 332221 1222 46788999999998888888899999986
No 184
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.22 E-value=9.3e-10 Score=108.17 Aligned_cols=294 Identities=10% Similarity=0.006 Sum_probs=152.1
Q ss_pred CeEEeecCCCcee---------EEEEe--CCCCE-EEEe-cCCCcEEEEeCc--c-cceeeeeeeee---ceeeeEEecc
Q 017296 10 PVAVLRGHRASVT---------DVCFH--QTKPI-LFAG-TTGGELRIWDTV--Q-HRTVSSSWVHS---AAHGIVSVAT 70 (374)
Q Consensus 10 ~~~~l~gH~~~V~---------~l~~~--~~~~~-l~s~-s~D~~v~vWd~~--~-~~~~~~~~~~~---~~~~~~~~~~ 70 (374)
....+.+|...|. ..+|+ |||+. |+.+ ..+..|.+|++. . ++ ...+.... ....+..++|
T Consensus 59 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~ 137 (662)
T 3azo_A 59 AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVL 137 (662)
T ss_dssp CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEE
T ss_pred CcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEE
Confidence 4556777877776 66676 89987 5544 446677777765 2 33 22322211 1234567778
Q ss_pred CCccccceeeecccc----------CeEEEEecCC------CCCCCCCceeee-ecceeeeeeeeeccccccccccCCCC
Q 017296 71 GPSIGLNKVISQGRD----------GTVKCWDIEN------GGLSSNPSLTIK-TNSYHFCKLSLVKEPYANAKQANEPK 133 (374)
Q Consensus 71 ~~~~~~~~l~s~~~D----------~~vrvwd~~~------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (374)
++ |++.|+.++.| .+|.+||+.+ ++.. .+. .....
T Consensus 138 sp--Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~l~~~~~~~--------------------- 189 (662)
T 3azo_A 138 LP--ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-----ELSDDAHRF--------------------- 189 (662)
T ss_dssp ET--TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-----ESSCSCSSE---------------------
T ss_pred CC--CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-----EEEecCCCc---------------------
Confidence 77 67888888877 5899999976 3210 000 00000
Q ss_pred cccccccCceeecCCCCCCCCCCCCCCCceEEEcccCC-------CeEEEEecC-CCc--eeEEeccCccCCCCCcCCCC
Q 017296 134 DCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQL-------SEVEIWDLN-TAE--RCTRLHQNSCGGSPNFSSKG 203 (374)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-------~~i~vWd~~-~~~--~~~~~~~~~~~~~~~~~~~~ 203 (374)
.. .-.+.+ +++++++++... ..|.+||+. +++ ....+....
T Consensus 190 ---------~~--------~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~----------- 240 (662)
T 3azo_A 190 ---------VT--------GPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP----------- 240 (662)
T ss_dssp ---------EC--------CCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET-----------
T ss_pred ---------cc--------CceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC-----------
Confidence 00 000122 334454444322 479999998 562 222332110
Q ss_pred CcceeEEEeeecCCCCCceEEEEEecCCc--EEEEeccCCCCceeeeecCccC--------eEEEEEecCCCceEEEecC
Q 017296 204 RGMCMAVQAYLPSKSQGFVNVLAGYEDGS--ILVWDIRNPGIPLTAMKVHLEP--------VLCLSIDESCNGGISGGAD 273 (374)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~gs~dg~--i~iwdl~~~~~~~~~~~~h~~~--------v~~~~~~~~~~~~~s~s~D 273 (374)
...... ..+.+ ++. .++++..++. |.+||+.. +........+... +..+.|.+++..+++++.
T Consensus 241 ~~~~~~-~~~sp---dg~-l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~- 313 (662)
T 3azo_A 241 EEAIAQ-AEWAP---DGS-LIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK- 313 (662)
T ss_dssp TBCEEE-EEECT---TSC-EEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-
T ss_pred CceEcc-eEECC---CCe-EEEEECCCCCeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCEEEEEEEc-
Confidence 000111 12333 243 5677777884 55555533 2222222222222 567888888888888888
Q ss_pred CeEEEEEcCCCCCeEEEEEeeecCCCCeEEE-EECCCCCEEEEEeCCCeEEEE--EccCCeEEEEecccCCceEEEEEeC
Q 017296 274 QKIVLYNLDHSTGSCVIKKEINLERPGISGT-SIRPDSKIAATAGWDRRVRIY--NYRKGSALAILKYHHATCNAVSFSS 350 (374)
Q Consensus 274 ~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~-~~sp~~~~l~s~~~dg~v~iw--d~~~~~~~~~~~~h~~~v~~v~~sp 350 (374)
++++||.++..++.. ..+..+...+..+ +++++.-++++++.+....+| |+.+++.......|...+....+.+
T Consensus 314 ~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~~~~ 390 (662)
T 3azo_A 314 GAAVLGILDPESGEL---VDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRARTIGARHTDPVDPAYYPE 390 (662)
T ss_dssp SSCEEEEEETTTTEE---EECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCEEEEESCCCCSSCGGGSCC
T ss_pred CccEEEEEECCCCcE---EEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCceEEeecCCcccCCccccCc
Confidence 999999665433332 2333444456655 555444445566667655555 5556664433344443333333333
Q ss_pred CCCEEEEEeCCCcEEEecCCC
Q 017296 351 DCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 351 ~~~~las~s~D~~v~~W~~~~ 371 (374)
..+..+.+..+..|..|-+.|
T Consensus 391 ~~~~~~~~~dg~~i~~~~~~P 411 (662)
T 3azo_A 391 PQIRTFTAPDGREIHAHIYPP 411 (662)
T ss_dssp CEEEEEECTTSCEEEEEEECC
T ss_pred ceEEEEEcCCCCEEEEEEECC
Confidence 333334433444566664433
No 185
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.21 E-value=8.7e-08 Score=87.30 Aligned_cols=282 Identities=9% Similarity=-0.053 Sum_probs=158.4
Q ss_pred EEeCCCCEEEEecC--CC---cEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeecc----------ccCeEE
Q 017296 25 CFHQTKPILFAGTT--GG---ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVK 89 (374)
Q Consensus 25 ~~~~~~~~l~s~s~--D~---~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~D~~vr 89 (374)
...+++++++.... .. +|.++|..+++.+..+.... .- .+++++ ++++++.+. .+++|.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~---~p-~i~~sp--Dg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGF---LP-NPVAAH--SGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCC---CC-CeEECC--CCCEEEEEeccccccccCCCCCeEE
Confidence 44577887776653 22 88999999888766554321 11 455665 666666553 468899
Q ss_pred EEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEccc
Q 017296 90 CWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE 169 (374)
Q Consensus 90 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (374)
+||..+.+... .+... ..... .. ...+.. ..+.+ +++++.++..
T Consensus 101 viD~~t~~~~~----~i~~~----------~~~~~----~~------g~~p~~-----------~~~sp-DG~~l~v~n~ 144 (373)
T 2mad_H 101 VFDPVTFLPIA----DIELP----------DAPRF----DV------GPYSWM-----------NANTP-NNADLLFFQF 144 (373)
T ss_pred EEECCCCcEEE----EEECC----------Ccccc----cc------CCCccc-----------eEECC-CCCEEEEEec
Confidence 99997653211 00000 00000 00 000000 01123 3344554443
Q ss_pred C-CCeEEEEecCCCceeEE-eccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 170 Q-LSEVEIWDLNTAERCTR-LHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 170 ~-d~~i~vWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
. ++.|.++| .+++.... +.... |.. +.+. +...+++.+.||.+..+|. ... ....
T Consensus 145 ~~~~~v~viD-~t~~~~~~~i~~~~--------------~~~---~~~~---~~~~~~~~~~dg~~~~vd~-~g~-~~~~ 201 (373)
T 2mad_H 145 AAGPAVGLVV-QGGSSDDQLLSSPT--------------CYH---IHPG---APSTFYLLCAQGGLAKTDH-AGG-AAGA 201 (373)
T ss_pred CCCCeEEEEE-CCCCEEeEEcCCCc--------------eEE---EEeC---CCceEEEEcCCCCEEEEEC-CCc-EEEE
Confidence 3 57899999 99887666 43210 111 1111 2223566778999999998 532 2211
Q ss_pred ee-----cCccCe-EEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeee--------cCCCCeEEEEECCCCCEE
Q 017296 248 MK-----VHLEPV-LCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN--------LERPGISGTSIRPDSKIA 313 (374)
Q Consensus 248 ~~-----~h~~~v-~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~--------~~~~~v~~~~~sp~~~~l 313 (374)
.. ....++ ....+.+++..++..+..+.+.+.|+.............. ....+...++|+|+++.+
T Consensus 202 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~l 281 (373)
T 2mad_H 202 GLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGI 281 (373)
T ss_pred EeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEE
Confidence 11 112222 1223344333444444677888888864322211111000 011223447899998877
Q ss_pred EEEeC----------CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCC-EEEEEe-CCCcEEEecCCCC
Q 017296 314 ATAGW----------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASAS-EDSTVALWELYPP 372 (374)
Q Consensus 314 ~s~~~----------dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s-~D~~v~~W~~~~~ 372 (374)
..+.. .+.|.+.|..+++.+.++.. ......++|+|||+ +++++. .++.|.++|....
T Consensus 282 yV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~ 351 (373)
T 2mad_H 282 YLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAG 351 (373)
T ss_pred EEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 66543 35899999999998888853 34688999999999 777776 5999999998643
No 186
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.20 E-value=4.1e-08 Score=86.75 Aligned_cols=119 Identities=12% Similarity=0.155 Sum_probs=84.8
Q ss_pred ccCeEEEEEe----cCCCceE-EEecCCeEEEEEcCCCCCeEEEE---EeeecCC-CCeEEEEECCCCCEEEEEeCCCeE
Q 017296 252 LEPVLCLSID----ESCNGGI-SGGADQKIVLYNLDHSTGSCVIK---KEINLER-PGISGTSIRPDSKIAATAGWDRRV 322 (374)
Q Consensus 252 ~~~v~~~~~~----~~~~~~~-s~s~D~~i~lwd~~~~~~~~~~~---~~~~~~~-~~v~~~~~sp~~~~l~s~~~dg~v 322 (374)
......+.++ +++..++ +...++.|.+||++. ++..... .....+. .....+++++++++.++...++.|
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~-~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i 249 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKG-PAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHI 249 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEE-TTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCC-CCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEE
Confidence 3445677888 8775544 445688999999762 2221111 1111121 347789999999998888889999
Q ss_pred EEEEccCCeEEEEecccCCceEEEEEeCCCC-EEEEEeCCCcEEEecCCC
Q 017296 323 RIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASASEDSTVALWELYP 371 (374)
Q Consensus 323 ~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~D~~v~~W~~~~ 371 (374)
.+||..+++.+..+..+...+.+++|+|+|+ ++++...++.|..|++..
T Consensus 250 ~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 250 EVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9999987777767776778899999999999 556666678898888753
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.20 E-value=8.1e-09 Score=90.26 Aligned_cols=190 Identities=11% Similarity=0.135 Sum_probs=121.3
Q ss_pred EEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEec-CCcEEEEeccCCC
Q 017296 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYE-DGSILVWDIRNPG 242 (374)
Q Consensus 164 ~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~-dg~i~iwdl~~~~ 242 (374)
+.++...++.|.+||.. ++.+..+...... ... ......+ .+. ...+. .+++... ++.|.+||. + +
T Consensus 43 l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~--~~~----~~~p~~i-~~~--~~~g~-l~v~~~~~~~~i~~~d~-~-g 109 (286)
T 1q7f_A 43 IIVADTNNHRIQIFDKE-GRFKFQFGECGKR--DSQ----LLYPNRV-AVV--RNSGD-IIVTERSPTHQIQIYNQ-Y-G 109 (286)
T ss_dssp EEEEEGGGTEEEEECTT-SCEEEEECCBSSS--TTC----BSSEEEE-EEE--TTTTE-EEEEECGGGCEEEEECT-T-S
T ss_pred EEEEECCCCEEEEECCC-CcEEEEecccCCC--ccc----ccCceEE-EEE--cCCCe-EEEEcCCCCCEEEEECC-C-C
Confidence 44455567899999987 5555444321000 000 0011111 111 11222 3444433 899999994 3 3
Q ss_pred Cceeeee-cCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCe
Q 017296 243 IPLTAMK-VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRR 321 (374)
Q Consensus 243 ~~~~~~~-~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~ 321 (374)
..+..+. .+...+..+++++++..+++...++.|.+||.+. ..........+......++++|+++++++...++.
T Consensus 110 ~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 186 (286)
T 1q7f_A 110 QFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC 186 (286)
T ss_dssp CEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE
T ss_pred cEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC---CEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCE
Confidence 3333332 2445788999999988777777889999998643 22211111122345889999999998888888999
Q ss_pred EEEEEccCCeEEEEeccc--CCceEEEEEeCCCCEEEEEeCCC-cEEEecCC
Q 017296 322 VRIYNYRKGSALAILKYH--HATCNAVSFSSDCKLMASASEDS-TVALWELY 370 (374)
Q Consensus 322 v~iwd~~~~~~~~~~~~h--~~~v~~v~~sp~~~~las~s~D~-~v~~W~~~ 370 (374)
|++||. +++.+..+..+ ...+..++++|+|+++++...++ .|++|+..
T Consensus 187 i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 187 VKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp EEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT
T ss_pred EEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC
Confidence 999997 56666666543 36789999999999999888886 99999853
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.19 E-value=6.9e-09 Score=92.96 Aligned_cols=258 Identities=8% Similarity=-0.045 Sum_probs=146.4
Q ss_pred ceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCC
Q 017296 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLS 99 (374)
Q Consensus 20 ~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~ 99 (374)
....|++. .+.+.++...++.|.+||..+++.+..+.... ....+++++ ++...++...++.|.+||+.+++..
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~---~p~~i~~~~--~g~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFT---SPRYIHFLS--DEKAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCS---SEEEEEEEE--TTEEEEEEBSCSEEEEEETTTTEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCC---CCcEEEEeC--CCeEEEEECCCCeEEEEECCCCeEE
Confidence 34667774 35566666778999999999998776664222 233445543 4444455557899999999876321
Q ss_pred CCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEccc-CCCeEEEEe
Q 017296 100 SNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE-QLSEVEIWD 178 (374)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~vWd 178 (374)
. .+... . ... .. ..+.... ..+++ +.++.. .+++|.++|
T Consensus 119 ~----~i~~g----------~-~~~---~~--------~~p~~i~-------------~~~~~-lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 119 G----YIECP----------D-MDM---ES--------GSTEQMV-------------QYGKY-VYVNCWSYQNRILKID 158 (328)
T ss_dssp E----EEECT----------T-CCT---TT--------CBCCCEE-------------EETTE-EEEEECTTCCEEEEEE
T ss_pred E----EEEcC----------C-ccc---cC--------CCcceEE-------------EECCE-EEEEcCCCCCEEEEEE
Confidence 0 00000 0 000 00 0000000 01223 333443 478999999
Q ss_pred cCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecC----------CcEEEEeccCCCCceeee
Q 017296 179 LNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED----------GSILVWDIRNPGIPLTAM 248 (374)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d----------g~i~iwdl~~~~~~~~~~ 248 (374)
+++++....+.....+ ..+. +. +.+. .+++...+ +.|.++|.++. .....+
T Consensus 159 ~~t~~~~~~i~~g~~p---------~~i~-----~~---~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~-~v~~~~ 219 (328)
T 3dsm_A 159 TETDKVVDELTIGIQP---------TSLV-----MD---KYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETF-TVEKQF 219 (328)
T ss_dssp TTTTEEEEEEECSSCB---------CCCE-----EC---TTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTT-EEEEEE
T ss_pred CCCCeEEEEEEcCCCc---------cceE-----Ec---CCCC-EEEEECCCccCCccccCCceEEEEECCCC-eEEEEE
Confidence 9999877666432111 1111 11 1232 34444433 78999998653 223333
Q ss_pred ecC-ccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECC-CCCEEEEE----eCCCeE
Q 017296 249 KVH-LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP-DSKIAATA----GWDRRV 322 (374)
Q Consensus 249 ~~h-~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~----~~dg~v 322 (374)
... ......+++++++..++.+.. .|.+||.+..+. ...............++++| ++++.++. ..+++|
T Consensus 220 ~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~--~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V 295 (328)
T 3dsm_A 220 KFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRV--PVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIV 295 (328)
T ss_dssp ECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSC--CSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEE
T ss_pred ecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCce--eeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEE
Confidence 322 236789999998887776644 888898864331 10011111124578899999 56566665 578999
Q ss_pred EEEEccCCeEEEEecccCCceEEEEE
Q 017296 323 RIYNYRKGSALAILKYHHATCNAVSF 348 (374)
Q Consensus 323 ~iwd~~~~~~~~~~~~h~~~v~~v~~ 348 (374)
.+||.. ++.+.++.. ......++|
T Consensus 296 ~v~d~~-g~~~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 296 YRYSPQ-GKLIDEFYV-GIIPGAFCW 319 (328)
T ss_dssp EEECTT-CCEEEEEEE-EESEEEEEE
T ss_pred EEECCC-CCEEEEEEe-ccCcceEEE
Confidence 999997 888877753 233455555
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.19 E-value=1.6e-07 Score=90.10 Aligned_cols=307 Identities=13% Similarity=0.051 Sum_probs=166.5
Q ss_pred CeEEeecCCCceeEEEEeCCCCEEEEecCCCcEEEEeCc--ccceeeeeeeeeceeeeEEeccCC--ccccceeeecc-c
Q 017296 10 PVAVLRGHRASVTDVCFHQTKPILFAGTTGGELRIWDTV--QHRTVSSSWVHSAAHGIVSVATGP--SIGLNKVISQG-R 84 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~s~~-~ 84 (374)
.+.++... ..+..++|+|+|++|++++.|+.|.+||+. +++.+..+.... .-..+++++ .+++++++.+. .
T Consensus 189 v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~---~P~~ia~s~~~~pDGk~l~v~n~~ 264 (567)
T 1qks_A 189 IKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS---EARSIETSKMEGWEDKYAIAGAYW 264 (567)
T ss_dssp EEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS---EEEEEEECCSTTCTTTEEEEEEEE
T ss_pred EEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC---CCceeEEccccCCCCCEEEEEEcc
Confidence 34444432 245689999999999999999999999985 666665554322 234556662 02566776555 5
Q ss_pred cCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceE
Q 017296 85 DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYM 164 (374)
Q Consensus 85 D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (374)
+++|.++|..+.+.. ..+..... ... . ....+...+.. ......++ .+
T Consensus 265 ~~~v~ViD~~t~~~~----~~i~~~~~----------~~~------~----~~~~p~~rva~-------i~~s~~~~-~~ 312 (567)
T 1qks_A 265 PPQYVIMDGETLEPK----KIQSTRGM----------TYD------E----QEYHPEPRVAA-------ILASHYRP-EF 312 (567)
T ss_dssp TTEEEEEETTTCCEE----EEEECCEE----------CTT------T----CCEESCCCEEE-------EEECSSSS-EE
T ss_pred CCeEEEEECCCCcEE----EEEecccc----------ccc------c----ccccCCCceEE-------EEEcCCCC-EE
Confidence 699999998765321 11111000 000 0 00000000000 00001122 23
Q ss_pred EEcccCCCeEEEEecCCCceeE--EeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC
Q 017296 165 AVAGEQLSEVEIWDLNTAERCT--RLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (374)
Q Consensus 165 ~~~~~~d~~i~vWd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~ 242 (374)
+++-...+.|.++|....+.+. .+... .... . ..+.+ .+...+++...++.|.++|+++.
T Consensus 313 vv~~~~~g~v~~vd~~~~~~~~v~~i~~~------------~~~~-d-~~~~p---dgr~~~va~~~sn~V~ViD~~t~- 374 (567)
T 1qks_A 313 IVNVKETGKILLVDYTDLNNLKTTEISAE------------RFLH-D-GGLDG---SHRYFITAANARNKLVVIDTKEG- 374 (567)
T ss_dssp EEEETTTTEEEEEETTCSSEEEEEEEECC------------SSEE-E-EEECT---TSCEEEEEEGGGTEEEEEETTTT-
T ss_pred EEEecCCCeEEEEecCCCccceeeeeecc------------cccc-C-ceECC---CCCEEEEEeCCCCeEEEEECCCC-
Confidence 3444566889999987654221 11110 0000 0 01222 34434455667899999999864
Q ss_pred Cceeeeec-----CccCeEEEEEecCCCce-EEEe-cCCeEEEEEcCCCCC---eEEEEEeeecCCCCeEEEEECCCCCE
Q 017296 243 IPLTAMKV-----HLEPVLCLSIDESCNGG-ISGG-ADQKIVLYNLDHSTG---SCVIKKEINLERPGISGTSIRPDSKI 312 (374)
Q Consensus 243 ~~~~~~~~-----h~~~v~~~~~~~~~~~~-~s~s-~D~~i~lwd~~~~~~---~~~~~~~~~~~~~~v~~~~~sp~~~~ 312 (374)
.....+.. |...-..+ ++|++..+ +++. .+++|.++|.+.... .+.....+.....+-.-+.++|++++
T Consensus 375 kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~ 453 (567)
T 1qks_A 375 KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY 453 (567)
T ss_dssp EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE
T ss_pred cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCe
Confidence 32333322 32212222 57764334 4443 568999999875221 01112233332223344778999999
Q ss_pred EEEEeC-------CCeEEEEEccCC-----e-EEEEec--------ccCCceEEEEEeCCCCEEEEEe-----CCCcEEE
Q 017296 313 AATAGW-------DRRVRIYNYRKG-----S-ALAILK--------YHHATCNAVSFSSDCKLMASAS-----EDSTVAL 366 (374)
Q Consensus 313 l~s~~~-------dg~v~iwd~~~~-----~-~~~~~~--------~h~~~v~~v~~sp~~~~las~s-----~D~~v~~ 366 (374)
+..... .++|.++|+.+. . .+..+. .....+..+.|+|+|+++..+. .++.|-+
T Consensus 454 l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v 533 (567)
T 1qks_A 454 LYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVV 533 (567)
T ss_dssp EEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEE
T ss_pred EEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEE
Confidence 887653 359999999876 2 123332 1235789999999999765543 3788988
Q ss_pred ecCCC
Q 017296 367 WELYP 371 (374)
Q Consensus 367 W~~~~ 371 (374)
+|...
T Consensus 534 ~D~~t 538 (567)
T 1qks_A 534 VDDKT 538 (567)
T ss_dssp EETTT
T ss_pred EECCC
Confidence 87643
No 190
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.19 E-value=5.2e-09 Score=104.34 Aligned_cols=137 Identities=16% Similarity=0.153 Sum_probs=85.8
Q ss_pred CcEEEEeccCCCCc-eeeeecCccCeEEEEEecCCCceEEEecC----CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEE
Q 017296 231 GSILVWDIRNPGIP-LTAMKVHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLDHSTGSCVIKKEINLERPGISGTS 305 (374)
Q Consensus 231 g~i~iwdl~~~~~~-~~~~~~h~~~v~~~~~~~~~~~~~s~s~D----~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (374)
..|.+||+..+... ...+..+...+... +.+++..++..+.+ +.|.+||++...... ......+...+..++
T Consensus 294 ~~l~~~d~~~~~~~~~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~--~~l~~~~~~~l~~~~ 370 (741)
T 1yr2_A 294 NTVHVARVTNGKIGPVTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRF--DTVVPESKDNLESVG 370 (741)
T ss_dssp CEEEEEEEETTEECCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEE--EEEECCCSSEEEEEE
T ss_pred ceEEEEECCCCCCcccEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcccc--EEEecCCCCeEEEEE
Confidence 47888888653112 34444455444443 33666667666553 458999986532111 111222233456677
Q ss_pred ECCCCCEEEEEeCCCeEEEEEcc-CCeEEEEeccc-CCceEEEEEeCCCCEEE----EEeCCCcEEEecCCC
Q 017296 306 IRPDSKIAATAGWDRRVRIYNYR-KGSALAILKYH-HATCNAVSFSSDCKLMA----SASEDSTVALWELYP 371 (374)
Q Consensus 306 ~sp~~~~l~s~~~dg~v~iwd~~-~~~~~~~~~~h-~~~v~~v~~sp~~~~la----s~s~D~~v~~W~~~~ 371 (374)
++ ++.++++...|+..+||.+. +++....+..+ ...+..++++|+++.|+ +....++|++||+..
T Consensus 371 ~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~t 441 (741)
T 1yr2_A 371 IA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPAT 441 (741)
T ss_dssp EE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTT
T ss_pred EE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 77 66788899999998888664 46666666653 56788999999998665 233457899998754
No 191
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.16 E-value=2.9e-09 Score=95.39 Aligned_cols=181 Identities=13% Similarity=0.104 Sum_probs=118.0
Q ss_pred CeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeee---
Q 017296 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAM--- 248 (374)
Q Consensus 172 ~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~--- 248 (374)
++|.+||..+++.+....... +. ....+ .+. +.+. .+++.+.++.|+.||.......+..+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~------~~---~p~gi---a~d---~~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~ 132 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNL------FY---LPHGL---SID---TDGN-YWVTDVALHQVFKLDPHSKEGPLLILGRS 132 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTT------CS---SEEEE---EEC---TTSC-EEEEETTTTEEEEECTTCSSCCSEEESBT
T ss_pred CcEEEEECCCCeEEeccCCCc------cC---CceEE---EEC---CCCC-EEEEECCCCEEEEEeCCCCeEEEEEeccc
Confidence 579999999888765443110 00 01111 121 2233 56777888999999985321133333
Q ss_pred ------ecCccCeEEEEEec-CCCceEEEe-cCCeEEEEEcCCCCCeEEEEEeeec--------CCCCeEEEEECCC-CC
Q 017296 249 ------KVHLEPVLCLSIDE-SCNGGISGG-ADQKIVLYNLDHSTGSCVIKKEINL--------ERPGISGTSIRPD-SK 311 (374)
Q Consensus 249 ------~~h~~~v~~~~~~~-~~~~~~s~s-~D~~i~lwd~~~~~~~~~~~~~~~~--------~~~~v~~~~~sp~-~~ 311 (374)
..+......+++++ ++..+++.+ .++.|++||.+. .......... +......++|+|+ +.
T Consensus 133 ~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~g---~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~ 209 (329)
T 3fvz_A 133 MQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPSG---KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQ 209 (329)
T ss_dssp TBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTTS---CEEEEECEECCSSSCCTTEESCEEEEEEETTTTE
T ss_pred CCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCCC---CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCE
Confidence 24455788999998 777777776 699999998542 2222111111 1123788999998 77
Q ss_pred EEEEEeCCCeEEEEEccCCeEEEEec--ccCCceEEEEEeC------CCCEEEEEeCCCcEEEecCCC
Q 017296 312 IAATAGWDRRVRIYNYRKGSALAILK--YHHATCNAVSFSS------DCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 312 ~l~s~~~dg~v~iwd~~~~~~~~~~~--~h~~~v~~v~~sp------~~~~las~s~D~~v~~W~~~~ 371 (374)
++++...+++|++||..+++.+..+. .+...+..++|+| +|+..++.+.+..|++|+...
T Consensus 210 l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~ 277 (329)
T 3fvz_A 210 LCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSS 277 (329)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTT
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCC
Confidence 77888889999999998899888774 4556788999999 333333344556899998654
No 192
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.15 E-value=4.2e-09 Score=96.18 Aligned_cols=189 Identities=13% Similarity=0.075 Sum_probs=112.8
Q ss_pred CCceEEEcccCCC--eEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEe
Q 017296 160 GPKYMAVAGEQLS--EVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (374)
Q Consensus 160 ~~~~~~~~~~~d~--~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwd 237 (374)
+++++++++..++ .|.+||+.+++........... .... .+.++ + ..|+.++.++.|.+||
T Consensus 46 Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~--------~~~~-----~~spd---g-~~l~~~~~~~~l~~~d 108 (388)
T 3pe7_A 46 DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDN--------TFGG-----FLSPD---D-DALFYVKDGRNLMRVD 108 (388)
T ss_dssp TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBC--------SSSC-----EECTT---S-SEEEEEETTTEEEEEE
T ss_pred CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCC--------ccce-----EEcCC---C-CEEEEEeCCCeEEEEE
Confidence 3455555555455 4888899888754333221100 0000 13332 2 2577788889999999
Q ss_pred ccCCCCceeeeecCccCeEEEE--EecCCCceEE----------------------EecCCeEEEEEcCCCCCeEEEEEe
Q 017296 238 IRNPGIPLTAMKVHLEPVLCLS--IDESCNGGIS----------------------GGADQKIVLYNLDHSTGSCVIKKE 293 (374)
Q Consensus 238 l~~~~~~~~~~~~h~~~v~~~~--~~~~~~~~~s----------------------~s~D~~i~lwd~~~~~~~~~~~~~ 293 (374)
+... ........+...+.... +++++..++. .+.+..|.+||++.......
T Consensus 109 ~~~g-~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l---- 183 (388)
T 3pe7_A 109 LATL-EENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVI---- 183 (388)
T ss_dssp TTTC-CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEE----
T ss_pred CCCC-cceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEe----
Confidence 9763 33333444444443333 3677765543 22457899999875432211
Q ss_pred eecCCCCeEEEEECC-CCCEEEEEeCC------CeEEEEEccCCeEEEEecccC--CceEEEEEeCCCCEEEEEeC--C-
Q 017296 294 INLERPGISGTSIRP-DSKIAATAGWD------RRVRIYNYRKGSALAILKYHH--ATCNAVSFSSDCKLMASASE--D- 361 (374)
Q Consensus 294 ~~~~~~~v~~~~~sp-~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~h~--~~v~~v~~sp~~~~las~s~--D- 361 (374)
..+...+..++|+| |++.|+....+ ..|.++|...++ ...+..+. ..+...+|+|||+.|+..+. +
T Consensus 184 -~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (388)
T 3pe7_A 184 -LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGS 261 (388)
T ss_dssp -EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTC
T ss_pred -ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEEEecCCCC
Confidence 12234578899999 99988876653 367777876544 34444444 35788999999998766443 2
Q ss_pred --CcEEEecCCCC
Q 017296 362 --STVALWELYPP 372 (374)
Q Consensus 362 --~~v~~W~~~~~ 372 (374)
..|++|++..+
T Consensus 262 ~~~~l~~~d~~~g 274 (388)
T 3pe7_A 262 PDRFIYSADPETL 274 (388)
T ss_dssp CCEEEEEECTTTC
T ss_pred CcceEEEEecCCC
Confidence 23999998643
No 193
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.11 E-value=2.5e-07 Score=85.34 Aligned_cols=141 Identities=8% Similarity=0.000 Sum_probs=95.0
Q ss_pred EEEEecCCcEEEEeccCCCCceeee-----ecCccC--eEEEEEecC-CCceEEEecCCeEEEEEcCCCCCeEEEEEee-
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAM-----KVHLEP--VLCLSIDES-CNGGISGGADQKIVLYNLDHSTGSCVIKKEI- 294 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~-----~~h~~~--v~~~~~~~~-~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~- 294 (374)
|+.+..++.|..||+.... ...+ .++... ...++|+++ +..+++....+.|+.|+.+.. ...+....
T Consensus 233 lyv~d~~~~I~~~d~~~~~--~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~ 308 (409)
T 3hrp_A 233 LYFVDSNKNFGRFNVKTQE--VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSAT 308 (409)
T ss_dssp EEEECTTCEEEEEETTTCC--EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTT
T ss_pred EEEEECCCcEEEEECCCCC--EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCC
Confidence 4446667889999986532 2222 112222 238999994 555566677889999987643 11111110
Q ss_pred --e--------cCCCCeEEEEECCCCCEEEEEe-CCCeEEEEEccCCeEEEEeccc---------------CCceEEEEE
Q 017296 295 --N--------LERPGISGTSIRPDSKIAATAG-WDRRVRIYNYRKGSALAILKYH---------------HATCNAVSF 348 (374)
Q Consensus 295 --~--------~~~~~v~~~~~sp~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~h---------------~~~v~~v~~ 348 (374)
. ..-.....++|+|++++.++-. .+++|+.||+.+++ +.++.++ ......+++
T Consensus 309 ~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giav 387 (409)
T 3hrp_A 309 QKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDGTPLEATFNYPYDICY 387 (409)
T ss_dssp CCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEE
T ss_pred CCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCCChhceEeCCceEEEE
Confidence 0 0012467899999999888777 78999999987776 4445444 246899999
Q ss_pred eCCCCEEEEEeCCCcEEEecC
Q 017296 349 SSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 349 sp~~~~las~s~D~~v~~W~~ 369 (374)
.|+|.++++-..++.|+.+++
T Consensus 388 d~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 388 DGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CSSSEEEEEESTTCEEEEEEE
T ss_pred cCCCCEEEEECCCCeEEEEEe
Confidence 999999999888999988765
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.09 E-value=1.8e-08 Score=87.89 Aligned_cols=185 Identities=13% Similarity=0.050 Sum_probs=126.8
Q ss_pred eEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC
Q 017296 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~ 242 (374)
-++++++.++.|.+||.++++.+.++..... ...... .+.+ .+. .++ +.++.|..||. + +
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~---------~~~~~~---~~~p---dG~-ilv--s~~~~V~~~d~-~-G 65 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKG---------WECNSV---AATK---AGE-ILF--SYSKGAKMITR-D-G 65 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTT---------CCCCEE---EECT---TSC-EEE--ECBSEEEEECT-T-S
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCcc---------CCCcCe---EECC---CCC-EEE--eCCCCEEEECC-C-C
Confidence 3567788899999999999998877754210 011111 1222 232 344 55788999998 4 4
Q ss_pred CceeeeecC-ccCeEEEEEecCCCceEEEec-CCeEEEEEcCCCCCeEEEEEeeec----CCCCeEEEEECCCCCEEEEE
Q 017296 243 IPLTAMKVH-LEPVLCLSIDESCNGGISGGA-DQKIVLYNLDHSTGSCVIKKEINL----ERPGISGTSIRPDSKIAATA 316 (374)
Q Consensus 243 ~~~~~~~~h-~~~v~~~~~~~~~~~~~s~s~-D~~i~lwd~~~~~~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~s~ 316 (374)
..+-.+..+ ...+.++.+.+++..+++.+. ++.+..+|. +++.+....+.. +......+++.+++.++++.
T Consensus 66 ~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~---~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 66 RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM---KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT---TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC---CCCEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence 445555543 246778888899998888877 667766664 344333322211 11124456789999999999
Q ss_pred eCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 317 GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 317 ~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
..+++|..||.+ |+.+.++..+ ..+.++.+.++|..+++++.++.|..+|...+
T Consensus 143 ~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 143 FATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp TTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTC
T ss_pred cCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCC
Confidence 999999999997 9999888754 45667788899999999888888888876543
No 195
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.09 E-value=2.5e-07 Score=80.83 Aligned_cols=280 Identities=8% Similarity=-0.008 Sum_probs=158.2
Q ss_pred cCCCceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCC
Q 017296 16 GHRASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIEN 95 (374)
Q Consensus 16 gH~~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~ 95 (374)
.....+.+|+++++|.+.++...++.|.+||.. ++.. .+...........+++.+ +++..++...++.|..+|..
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-EFEVPTPDAKVMCLIVSS--LGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-EEECCCCCCcceeEEECC--CCCEEEEecCCCeEEEECCC-
Confidence 345678999999999998888888999999987 5432 221111112345555554 45666666667889999976
Q ss_pred CCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEE
Q 017296 96 GGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVE 175 (374)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~ 175 (374)
++.. ... ..... . .+.... . ..++. +.++...++.|.
T Consensus 92 g~~~-----~~~-----------~~~~~---------~-----~~~~i~-----------~-~~~g~-l~v~~~~~~~i~ 128 (300)
T 2qc5_A 92 GGFT-----EYP-----------LPQPD---------S-----GPYGIT-----------E-GLNGD-IWFTQLNGDRIG 128 (300)
T ss_dssp SCEE-----EEE-----------CSSTT---------C-----CEEEEE-----------E-CSTTC-EEEEETTTTEEE
T ss_pred CCeE-----Eec-----------CCCCC---------C-----CCccce-----------E-CCCCC-EEEEccCCCeEE
Confidence 4310 000 00000 0 000000 0 01122 333444456888
Q ss_pred EEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCe
Q 017296 176 IWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPV 255 (374)
Q Consensus 176 vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v 255 (374)
.+|.. ++... +.... .......++ + + ..+. ..++...++.|..||. ...........+...+
T Consensus 129 ~~~~~-g~~~~-~~~~~--------~~~~~~~i~---~--d-~~g~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~ 190 (300)
T 2qc5_A 129 KLTAD-GTIYE-YDLPN--------KGSYPAFIT---L--G-SDNA-LWFTENQNNSIGRITN-TGKLEEYPLPTNAAAP 190 (300)
T ss_dssp EECTT-SCEEE-EECSS--------TTCCEEEEE---E--C-TTSS-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCE
T ss_pred EECCC-CCEEE-ccCCC--------CCCCceeEE---E--C-CCCC-EEEEecCCCeEEEECC-CCcEEEeeCCCCCCCc
Confidence 89887 54332 11100 000111111 1 1 1232 3444555788999987 3222111122344568
Q ss_pred EEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEE-
Q 017296 256 LCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA- 334 (374)
Q Consensus 256 ~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~- 334 (374)
..+.+++++...++....+.|..||.. +.... .........+.++++++++++.++...++.|.+||. +++...
T Consensus 191 ~~i~~d~~g~l~v~~~~~~~i~~~~~~---g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 265 (300)
T 2qc5_A 191 VGITSGNDGALWFVEIMGNKIGRITTT---GEISE-YDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEY 265 (300)
T ss_dssp EEEEECTTSSEEEEETTTTEEEEECTT---CCEEE-EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEE
T ss_pred ceEEECCCCCEEEEccCCCEEEEEcCC---CcEEE-EECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEE
Confidence 899999888655555567789999873 22221 112223345789999999997777767899999998 454332
Q ss_pred EecccCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 335 ILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 335 ~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
.+......+.++++.++|++.++.. . .|..++
T Consensus 266 ~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 266 QLQTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp ECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred ECCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 2333456788999999999777655 4 444444
No 196
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.99 E-value=4.4e-08 Score=96.86 Aligned_cols=93 Identities=13% Similarity=0.138 Sum_probs=57.3
Q ss_pred CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeC-CC--eEEEEEccCCeEEEEecc-cCCceEEEEEe
Q 017296 274 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGW-DR--RVRIYNYRKGSALAILKY-HHATCNAVSFS 349 (374)
Q Consensus 274 ~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~-dg--~v~iwd~~~~~~~~~~~~-h~~~v~~v~~s 349 (374)
+.|..+|++....... ..+..+...+. .|+|+++.|+.... ++ .|++||+..+ ....+.. +...+..+.++
T Consensus 305 ~~l~~~d~~~~~~~~~--~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~-~~~~l~~p~~~~~~~~~~~ 379 (693)
T 3iuj_A 305 RRLVTVDAANPGPAHW--RDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK-RVREVALPGLGSVSGFNGK 379 (693)
T ss_dssp CEEEEEETTSCCGGGC--EEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-EEEEECCSSSSEEEECCCC
T ss_pred CEEEEEeCCCCCcccc--EEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-eeEEeecCCCceEEeeecC
Confidence 5788888865432100 11222333343 89999888776554 44 6888988644 4444432 44567778888
Q ss_pred CCCCEEEEEeCC----CcEEEecCCC
Q 017296 350 SDCKLMASASED----STVALWELYP 371 (374)
Q Consensus 350 p~~~~las~s~D----~~v~~W~~~~ 371 (374)
|+++.|+....+ +++..||+..
T Consensus 380 ~d~~~l~~~~ss~~tP~~l~~~d~~~ 405 (693)
T 3iuj_A 380 HDDPALYFGFENYAQPPTLYRFEPKS 405 (693)
T ss_dssp TTCSCEEEEEECSSSCCEEEEECTTT
T ss_pred CCCCEEEEEecCCCCCCEEEEEECCC
Confidence 998866554434 7888888753
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.99 E-value=2.9e-06 Score=74.54 Aligned_cols=108 Identities=14% Similarity=0.115 Sum_probs=78.8
Q ss_pred ccCeEEEEEecCCCce-EEEecCCeEEEEEcCCCCCeEEEEE---eeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEc
Q 017296 252 LEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKK---EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 327 (374)
Q Consensus 252 ~~~v~~~~~~~~~~~~-~s~s~D~~i~lwd~~~~~~~~~~~~---~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~ 327 (374)
....+.+++++++..+ ++.+.++.|..|+++..++...... .+.........+++.++|++.++....+.|.+||.
T Consensus 148 ~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~ 227 (297)
T 3g4e_A 148 VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDP 227 (297)
T ss_dssp ESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECT
T ss_pred cccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcC
Confidence 3445778999988766 4566788999999864444322111 11112235678999999998888778889999999
Q ss_pred cCCeEEEEecccCCceEEEEEe-CCCCEE-EEEe
Q 017296 328 RKGSALAILKYHHATCNAVSFS-SDCKLM-ASAS 359 (374)
Q Consensus 328 ~~~~~~~~~~~h~~~v~~v~~s-p~~~~l-as~s 359 (374)
.+++.+..+..+...+.+++|. ||++.| +|..
T Consensus 228 ~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 228 VTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp TTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 8899988888787889999998 888754 4444
No 198
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.97 E-value=1.4e-07 Score=86.78 Aligned_cols=280 Identities=13% Similarity=0.052 Sum_probs=159.9
Q ss_pred CCCCEEEEecC-C----CcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeecc----------ccCeEEEEe
Q 017296 28 QTKPILFAGTT-G----GELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWD 92 (374)
Q Consensus 28 ~~~~~l~s~s~-D----~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~D~~vrvwd 92 (374)
++++.++.... + +.|.+.|..+++.+..+..... . .+++++ ++++++.+. .+++|.++|
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~--P--gia~Sp--Dgk~lyVan~~~~~~~~G~~~~~VsviD 155 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFL--P--HPVAAE--DGSFFAQASTVFERIARGKRTDYVEVFD 155 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSS--C--EEEECT--TSSCEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCC--C--ceEECC--CCCEEEEEeccccccccCCCCCEEEEEE
Confidence 46665554433 3 6999999999988777654332 2 455666 566666554 467999999
Q ss_pred cCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEccc-CC
Q 017296 93 IENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE-QL 171 (374)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d 171 (374)
..+++... .+.. ...... .. ...+.. ..+.+++ +++.++.. .+
T Consensus 156 ~~t~~vv~----~I~v----------~g~~r~---~~-------g~~P~~-----------~~~spDG-k~lyV~n~~~~ 199 (426)
T 3c75_H 156 PVTFLPIA----DIEL----------PDAPRF---LV-------GTYQWM-----------NALTPDN-KNLLFYQFSPA 199 (426)
T ss_dssp TTTCCEEE----EEEE----------TTCCCC---CB-------SCCGGG-----------SEECTTS-SEEEEEECSSS
T ss_pred CCCCcEEE----EEEC----------CCcccc---cc-------CCCcce-----------EEEcCCC-CEEEEEecCCC
Confidence 98864211 1100 000000 00 000000 0122333 44444443 36
Q ss_pred CeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCcee----e
Q 017296 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLT----A 247 (374)
Q Consensus 172 ~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~----~ 247 (374)
+.|.+.|+.+.+.+.++.-.. +.. ..+. +...+++.+.||.+.+.++.. ..... .
T Consensus 200 ~~VsVID~~t~kvv~~I~v~g--------------~~~---~~p~---g~~~~v~~~~dG~~~~V~~~~-~~v~~~~~~~ 258 (426)
T 3c75_H 200 PAVGVVDLEGKTFDRMLDVPD--------------CYH---IFPA---SPTVFYMNCRDGSLARVDFAD-GETKVTNTEV 258 (426)
T ss_dssp CEEEEEETTTTEEEEEEECCS--------------EEE---EEEE---ETTEEEEEETTSSEEEEECCT-TCCEEEECCC
T ss_pred CeEEEEECCCCeEEEEEEcCC--------------cee---eccC---CCcEEEEEcCCCCEEEEECCC-CcEEEEeeee
Confidence 789999999998877765311 001 1111 112356677888888888833 22221 1
Q ss_pred eecCccCe-EEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeee--------cCCCCeEEEEECCCCCEEEEEeC
Q 017296 248 MKVHLEPV-LCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN--------LERPGISGTSIRPDSKIAATAGW 318 (374)
Q Consensus 248 ~~~h~~~v-~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~--------~~~~~v~~~~~sp~~~~l~s~~~ 318 (374)
+.....++ ..+.+.+++..++..+..+++.+.|+...+........+. ....+...++|+|+++.+..+..
T Consensus 259 ~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~ 338 (426)
T 3c75_H 259 FHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVD 338 (426)
T ss_dssp CSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEE
T ss_pred eccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEec
Confidence 11112221 1244566666666667788899988854321110000000 00011223789999886655432
Q ss_pred ----------CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCC-EEEEEe-CCCcEEEecCCC
Q 017296 319 ----------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASAS-EDSTVALWELYP 371 (374)
Q Consensus 319 ----------dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s-~D~~v~~W~~~~ 371 (374)
+++|.+.|..+.+.++++... ...+.++|+|||+ +++++. .++.|.++|...
T Consensus 339 ~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 339 QRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp ECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred ccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 357999999999998888632 3588999999999 888877 599999999854
No 199
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.96 E-value=1.4e-08 Score=89.31 Aligned_cols=143 Identities=10% Similarity=0.041 Sum_probs=100.6
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
.++++..++.|..||.... ...+..+...+..+++++++..+++...++.|.+||.+..................+.
T Consensus 42 l~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 118 (296)
T 3e5z_A 42 VIFSDVRQNRTWAWSDDGQ---LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPN 118 (296)
T ss_dssp EEEEEGGGTEEEEEETTSC---EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCC
T ss_pred EEEEeCCCCEEEEEECCCC---eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCC
Confidence 4677888999999998753 5556667778999999999887666667799999998543321111111001112456
Q ss_pred EEEECCCCCEEEEEeC-----------------CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEE
Q 017296 303 GTSIRPDSKIAATAGW-----------------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVA 365 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~-----------------dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 365 (374)
.++++|+|+++++... .+.|..++.. ++ +..+..+...+..++|+|||+.|++.+.++.|+
T Consensus 119 ~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~ 196 (296)
T 3e5z_A 119 DVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATH 196 (296)
T ss_dssp CEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEE
T ss_pred CEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEE
Confidence 7999999998887321 2345555543 44 444556777889999999999888888899999
Q ss_pred EecCC
Q 017296 366 LWELY 370 (374)
Q Consensus 366 ~W~~~ 370 (374)
+|++.
T Consensus 197 ~~~~~ 201 (296)
T 3e5z_A 197 RYCLN 201 (296)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99975
No 200
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.95 E-value=1.3e-08 Score=93.00 Aligned_cols=143 Identities=10% Similarity=0.005 Sum_probs=88.2
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEE-------------------EEEecCCCceEEE-----ecCCeEEE
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLC-------------------LSIDESCNGGISG-----GADQKIVL 278 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~-------------------~~~~~~~~~~~s~-----s~D~~i~l 278 (374)
.|+..+.++.|.+||+... ........+...... ..+.|++..++.. ..+..|.+
T Consensus 94 ~l~~~~~~~~l~~~d~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~ 172 (396)
T 3c5m_A 94 AFFYVKNELNLMKVDLETL-EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIK 172 (396)
T ss_dssp EEEEEETTTEEEEEETTTC-CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEE
T ss_pred EEEEEEcCCcEEEEECCCC-CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEE
Confidence 5777778889999998753 323333323321111 1234455444332 45678999
Q ss_pred EEcCCCCCeEEEEEeeecCCCCeEEEEECC-CCCEEEEEeCC------CeEEEEEccCCeEEEEeccc--CCceEEEEEe
Q 017296 279 YNLDHSTGSCVIKKEINLERPGISGTSIRP-DSKIAATAGWD------RRVRIYNYRKGSALAILKYH--HATCNAVSFS 349 (374)
Q Consensus 279 wd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~h--~~~v~~v~~s 349 (374)
||++........ .+...+..+.|+| +++.|+..+.+ ..|.+||+..++.. .+..+ ...+..++|+
T Consensus 173 ~d~~~g~~~~~~-----~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~s 246 (396)
T 3c5m_A 173 VDIETGELEVIH-----QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWI 246 (396)
T ss_dssp EETTTCCEEEEE-----EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEEC
T ss_pred EECCCCcEEeec-----cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEEC
Confidence 998754322211 1234578899999 78877655543 36888888655433 33333 2368889999
Q ss_pred CCCCEEEEEeCC-----CcEEEecCCCC
Q 017296 350 SDCKLMASASED-----STVALWELYPP 372 (374)
Q Consensus 350 p~~~~las~s~D-----~~v~~W~~~~~ 372 (374)
|||++|+.++.+ +.|++|++..+
T Consensus 247 pdg~~l~~~~~~~~~~~~~l~~~d~~~g 274 (396)
T 3c5m_A 247 PDGSAMAYVSYFKGQTDRVIYKANPETL 274 (396)
T ss_dssp TTSSCEEEEEEETTTCCEEEEEECTTTC
T ss_pred CCCCEEEEEecCCCCccceEEEEECCCC
Confidence 999988777654 45999998543
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.90 E-value=1.8e-06 Score=78.17 Aligned_cols=272 Identities=12% Similarity=0.081 Sum_probs=146.1
Q ss_pred eEEeecCCCceeEEEEeCCCCEEEEec----------CCCcEEEEeCcccceeeeeeeeece-----eeeEEeccCCccc
Q 017296 11 VAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHSAA-----HGIVSVATGPSIG 75 (374)
Q Consensus 11 ~~~l~gH~~~V~~l~~~~~~~~l~s~s----------~D~~v~vWd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 75 (374)
+.++..-..+ .|+++|+|++|+.+. .++.|.+||..+++.+..+...... ..-..+++++ +
T Consensus 72 ~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp--D 147 (386)
T 3sjl_D 72 IGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP--D 147 (386)
T ss_dssp EEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT--T
T ss_pred EEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC--C
Confidence 3444433444 399999999887765 3678999999998877665432100 0111244555 6
Q ss_pred cceeeecc--ccCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCC
Q 017296 76 LNKVISQG--RDGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSK 153 (374)
Q Consensus 76 ~~~l~s~~--~D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (374)
+++++.+. .+++|.++|+.+++... .+ ....|. ...
T Consensus 148 Gk~lyVan~~~~~~VsVID~~t~~vv~----tI---~v~g~~---------------------~~~-------------- 185 (386)
T 3sjl_D 148 GKTLLFYQFSPAPAVGVVDLEGKAFKR----ML---DVPDCY---------------------HIF-------------- 185 (386)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEE----EE---ECCSEE---------------------EEE--------------
T ss_pred CCEEEEEEcCCCCeEEEEECCCCcEEE----EE---ECCCcc---------------------eee--------------
Confidence 67777654 36899999998874211 11 000010 000
Q ss_pred CCCCCCCCceEEEcccCCCeEEEEecCC-CceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCc
Q 017296 154 DDVPAEGPKYMAVAGEQLSEVEIWDLNT-AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS 232 (374)
Q Consensus 154 ~~~~~~~~~~~~~~~~~d~~i~vWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~ 232 (374)
+.+.+.++ +.+.|+++.+.++.+ ++....... .+..... .......|. ...+. ++-.+.+|.
T Consensus 186 ----P~g~~~~~-~~~~DG~~~~v~~~~~g~v~~~~~~-------~~~~~~~-~~~~~~~~~--~~dG~--~~~vs~~g~ 248 (386)
T 3sjl_D 186 ----PTAPDTFF-MHCRDGSLAKVAFGTEGTPEITHTE-------VFHPEDE-FLINHPAYS--QKAGR--LVWPTYTGK 248 (386)
T ss_dssp ----EEETTEEE-EEETTSCEEEEECCSSSCCEEEECC-------CCSCTTS-CBCSCCEEE--TTTTE--EEEEBTTSE
T ss_pred ----cCCCceeE-EECCCCCEEEEECCCCCeEEEeecc-------eeccccc-cccccceeE--cCCCc--EEEEeCCCE
Confidence 01112222 334467788888876 454221111 1111000 000000111 11232 333555899
Q ss_pred EEEEeccCCCC-ceeeee---------c-CccCeEEEEEecCCCceEEEec----------CCeEEEEEcCCCCCeEEEE
Q 017296 233 ILVWDIRNPGI-PLTAMK---------V-HLEPVLCLSIDESCNGGISGGA----------DQKIVLYNLDHSTGSCVIK 291 (374)
Q Consensus 233 i~iwdl~~~~~-~~~~~~---------~-h~~~v~~~~~~~~~~~~~s~s~----------D~~i~lwd~~~~~~~~~~~ 291 (374)
|.+.|+..... ...... + .......+.+++++..++..-. .++|.+.|+... +....
T Consensus 249 V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~--kv~~~ 326 (386)
T 3sjl_D 249 IHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG--ERLAK 326 (386)
T ss_dssp EEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC--CEEEE
T ss_pred EEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC--eEEEE
Confidence 99999864321 111111 0 1223445777777666655432 256777777543 33322
Q ss_pred EeeecCCCCeEEEEECCCCC-EEEEE-eCCCeEEEEEccCCeEEEEecccCCceEEEEEeCC
Q 017296 292 KEINLERPGISGTSIRPDSK-IAATA-GWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSD 351 (374)
Q Consensus 292 ~~~~~~~~~v~~~~~sp~~~-~l~s~-~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~ 351 (374)
-... ..+.+++|+||++ +|+++ ..+++|.++|..+++.++++..- +..+.+.+++|
T Consensus 327 i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 327 FEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred EECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 2221 2477899999997 66655 45899999999999998887632 23345566665
No 202
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.88 E-value=2.1e-06 Score=75.76 Aligned_cols=110 Identities=9% Similarity=0.060 Sum_probs=73.6
Q ss_pred CccCeEEEEEecCCCceEEEecC------CeEEEEEcCCCCCeEEEEEe-eecCCCCeEEEEECCCCCEEEEEeCCCeEE
Q 017296 251 HLEPVLCLSIDESCNGGISGGAD------QKIVLYNLDHSTGSCVIKKE-INLERPGISGTSIRPDSKIAATAGWDRRVR 323 (374)
Q Consensus 251 h~~~v~~~~~~~~~~~~~s~s~D------~~i~lwd~~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~ 323 (374)
.......++|++++..++.+... +.|..|+++... ...... ..........+++.++|++.++. .+ .|.
T Consensus 186 ~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~ 261 (305)
T 3dr2_A 186 DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVC 261 (305)
T ss_dssp EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE--EEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEE
T ss_pred cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEE
Confidence 34456778999998877666554 789999986432 111111 11112234578999999965544 44 599
Q ss_pred EEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEE
Q 017296 324 IYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVAL 366 (374)
Q Consensus 324 iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~ 366 (374)
+||. +++.+..+..+. .+..++|.|+++.|..++.++..++
T Consensus 262 ~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 262 VFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 9998 577777776554 6889999999988877777765444
No 203
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.87 E-value=2.7e-07 Score=83.08 Aligned_cols=280 Identities=14% Similarity=0.103 Sum_probs=147.0
Q ss_pred EeecCCCceeEEEEeCCCCEEEEec--CCCcEEEEeCcccceeeeeee--e---eceeeeEEeccCCccccceeeeccc-
Q 017296 13 VLRGHRASVTDVCFHQTKPILFAGT--TGGELRIWDTVQHRTVSSSWV--H---SAAHGIVSVATGPSIGLNKVISQGR- 84 (374)
Q Consensus 13 ~l~gH~~~V~~l~~~~~~~~l~s~s--~D~~v~vWd~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~l~s~~~- 84 (374)
++.........|+++++|+++++.. .++.++||.+.+++ +..+.. + ........+++++ +++..++...
T Consensus 11 ~v~~~~~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~-~~~~p~~~~~~~~~~~~p~gv~~d~--~g~L~v~D~g~ 87 (343)
T 2qe8_A 11 VVAELSLAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDG-LIPFPPQSGNAIITFDTVLGIKSDG--NGIVWMLDNGN 87 (343)
T ss_dssp EEEEESSCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTE-EEESCCCCSSCCCCCSCEEEEEECS--SSEEEEEECHH
T ss_pred EEEEcCCCcceEEECCCCCEEEEeCCCCCCceEEEEECCCC-eecCCCcccCcccceeEeeEEEEcC--CCcEEEEcCCC
Confidence 3333337789999999999998864 23436777765443 222110 0 0112355666665 3454444333
Q ss_pred ----cCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCC
Q 017296 85 ----DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEG 160 (374)
Q Consensus 85 ----D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (374)
+..|.+||+.+++.. +.. .+.. ... .... .+.... +.+.+
T Consensus 88 ~~~~~~~i~~~d~~tg~~~-------~~~-------~~~~-~~~--~~~~--------~~~~v~-----------vd~~~ 131 (343)
T 2qe8_A 88 QSKSVPKLVAWDTLNNQLS-------RVI-------YLPP-PIT--LSNS--------FVNDLA-----------VDLIH 131 (343)
T ss_dssp HHTSCCEEEEEETTTTEEE-------EEE-------ECCT-TTS--CTTC--------CCCEEE-----------EETTT
T ss_pred CcCCCCeEEEEECCCCeEE-------EEE-------ECCh-hhc--cccc--------ccceEE-----------EecCC
Confidence 578999999876421 000 0000 000 0000 000000 01112
Q ss_pred CceEEEccc---CCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEe
Q 017296 161 PKYMAVAGE---QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWD 237 (374)
Q Consensus 161 ~~~~~~~~~---~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwd 237 (374)
..+.++.. .++.|.+||+.+++....+..+.. ..... .. +.. .+ ..+.+.+.+|.++.|.
T Consensus 132 -g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~-----~~~~~--~~-----~~~---~g-~~~~~~~~~g~~~~~~ 194 (343)
T 2qe8_A 132 -NFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPG-----IAPED--ID-----LVI---DG-VPVQIGQPDGTVIRPH 194 (343)
T ss_dssp -TEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTT-----TSCCS--CC-----CEE---TT-EECBEECTTSCEECCC
T ss_pred -CEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCc-----ccccc--cc-----eeE---CC-EEEEeccCCCceecee
Confidence 23333333 567999999998876555432100 00000 00 000 11 1233455566665542
Q ss_pred ccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCC---CCeE----EE-EEeeecCCCCeEEEEECCC
Q 017296 238 IRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS---TGSC----VI-KKEINLERPGISGTSIRPD 309 (374)
Q Consensus 238 l~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~---~~~~----~~-~~~~~~~~~~v~~~~~sp~ 309 (374)
..+..+++++++..++.+..++. ++|.++.. .+.. .. ......+......++++++
T Consensus 195 ---------------~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~ 258 (343)
T 2qe8_A 195 ---------------LGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKD 258 (343)
T ss_dssp ---------------CCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTT
T ss_pred ---------------cccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCC
Confidence 13456889999887877766653 45544310 0000 00 0000011223557899999
Q ss_pred CCEEEEEeCCCeEEEEEccCCeEEEEecc-cCCceEEEEEeCCCCEEEEEeCCCcE
Q 017296 310 SKIAATAGWDRRVRIYNYRKGSALAILKY-HHATCNAVSFSSDCKLMASASEDSTV 364 (374)
Q Consensus 310 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~las~s~D~~v 364 (374)
|.+.++...++.|.+||..+++....... +...+.+++|.++|+++++.+..+.+
T Consensus 259 G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 259 HNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp CCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred CCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 99999888899999999856664322222 24568999999999988887755444
No 204
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.87 E-value=9.2e-08 Score=86.92 Aligned_cols=121 Identities=12% Similarity=0.144 Sum_probs=92.3
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
.++++ .++.|++||+++.. .......|..++..+.+.+. .++.+..||++.+||+..... . . ....|+
T Consensus 99 ~L~v~-~~~~l~v~dv~sl~-~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~--~--~----~~~~Vs 166 (388)
T 1xip_A 99 QVLVS-TRNALYSLDLEELS-EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKST--K--Q----LAQNVT 166 (388)
T ss_dssp EEEEE-ESSEEEEEESSSTT-CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCE--E--E----EEESEE
T ss_pred EEEEE-cCCcEEEEEchhhh-ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcc--c--c----ccCCce
Confidence 46666 88999999997643 34445667778887766432 388999999999999974431 1 1 124699
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCeE--EEEe------c---ccCCceEEEEEeCCCCEEEE
Q 017296 303 GTSIRPDSKIAATAGWDRRVRIYNYRKGSA--LAIL------K---YHHATCNAVSFSSDCKLMAS 357 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~--~~~~------~---~h~~~v~~v~~sp~~~~las 357 (374)
+++|||+| ++.|..||++++|+...++. .+++ . +|...|.+|.|.++++++++
T Consensus 167 ~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 167 SFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred EEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 99999999 67789999999998877664 5556 2 37789999999999998876
No 205
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.86 E-value=4e-08 Score=89.29 Aligned_cols=129 Identities=7% Similarity=-0.010 Sum_probs=91.4
Q ss_pred EEEEEecCCcEEEEeccCCC----------CceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEE
Q 017296 223 NVLAGYEDGSILVWDIRNPG----------IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK 292 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~----------~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~ 292 (374)
.+++|+.+ .+++|++.... .+.. ...+.. |+.|+| ++..++.+ .++.|++||+.......
T Consensus 51 ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~---- 120 (388)
T 1xip_A 51 LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFR---- 120 (388)
T ss_dssp EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEE----
T ss_pred EEEEeCCC-EEEEEEhhHhhhhhccccccccceE-EeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccC----
Confidence 46777776 56669875321 1111 223555 999999 66777777 88999999987543211
Q ss_pred eeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 293 EINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 293 ~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
....+...+.++.+.+. .+++...||.+.+||+++++... +...|.+++|||+| ++.|..||++++|+.
T Consensus 121 ~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~ 189 (388)
T 1xip_A 121 TVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAW 189 (388)
T ss_dssp EEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEE
T ss_pred ccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcC
Confidence 12233445777666544 28888999999999998877543 45689999999999 677899999999965
No 206
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.85 E-value=2.4e-07 Score=91.78 Aligned_cols=188 Identities=8% Similarity=-0.013 Sum_probs=112.2
Q ss_pred CCceEEEcccCC----CeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCc---
Q 017296 160 GPKYMAVAGEQL----SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS--- 232 (374)
Q Consensus 160 ~~~~~~~~~~~d----~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~--- 232 (374)
++++++++.... .+|++||+.+++.............. .+.++ +. .|+.++.++.
T Consensus 135 Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~--------------~wspD---g~-~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 135 DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCM--------------AWTHD---GK-GMFYNAYPQQDGK 196 (710)
T ss_dssp TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCE--------------EECTT---SS-EEEEEECCCCSSC
T ss_pred CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceE--------------EEEeC---CC-EEEEEEECCcccc
Confidence 344555543332 38999999999865432211100111 12222 22 3555555544
Q ss_pred -------------EEEEeccCCCCc-eeeee--cCccCeEEEEEecCCCceEEEec-----CCeEEEEEcCC------CC
Q 017296 233 -------------ILVWDIRNPGIP-LTAMK--VHLEPVLCLSIDESCNGGISGGA-----DQKIVLYNLDH------ST 285 (374)
Q Consensus 233 -------------i~iwdl~~~~~~-~~~~~--~h~~~v~~~~~~~~~~~~~s~s~-----D~~i~lwd~~~------~~ 285 (374)
|++|++.+.... ...+. .|...+..+.+++++..++..+. +..|.+||++. ..
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 276 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI 276 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc
Confidence 999999653211 12222 24455788999999998877664 67899999975 22
Q ss_pred CeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC----CeEEEEEccCCe--EEEEecccCC--ceEEEEEeCCCCEEEE
Q 017296 286 GSCVIKKEINLERPGISGTSIRPDSKIAATAGWD----RRVRIYNYRKGS--ALAILKYHHA--TCNAVSFSSDCKLMAS 357 (374)
Q Consensus 286 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d----g~v~iwd~~~~~--~~~~~~~h~~--~v~~v~~sp~~~~las 357 (374)
.... .+..+...+.. .|+|+++.|+..+.+ +.|.+||+.+++ ....+..|.. .+..++|++++.++++
T Consensus 277 ~~~~---~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~ 352 (710)
T 2xdw_A 277 LKWV---KLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLC 352 (710)
T ss_dssp CCCE---EEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEE
T ss_pred cceE---EeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEE
Confidence 1111 11222333333 588998877655543 369999998764 2344444543 6888999988889999
Q ss_pred EeCCCcEEEecC
Q 017296 358 ASEDSTVALWEL 369 (374)
Q Consensus 358 ~s~D~~v~~W~~ 369 (374)
+..|+..+||-+
T Consensus 353 ~~~~g~~~l~~~ 364 (710)
T 2xdw_A 353 YLHDVKNTLQLH 364 (710)
T ss_dssp EEETTEEEEEEE
T ss_pred EEECCEEEEEEE
Confidence 999997666533
No 207
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.83 E-value=7.4e-07 Score=76.79 Aligned_cols=141 Identities=9% Similarity=0.013 Sum_probs=98.1
Q ss_pred EEEEecCCcEEEEeccCCCCceeeee-cCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMK-VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
++.+..++.|..||..... ...+. .....+..+++++++..+++...++.|.+|+..... .... .........
T Consensus 80 l~v~~~~~~i~~~d~~~~~--~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~--~~~~--~~~~~~~p~ 153 (270)
T 1rwi_B 80 VYVTDFNNRVVTLAAGSNN--QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKT--QTVL--PFTGLNDPD 153 (270)
T ss_dssp EEEEETTTEEEEECTTCSC--CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCS--CEEC--CCCSCCSCC
T ss_pred EEEEcCCCEEEEEeCCCce--EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCce--eEee--ccccCCCce
Confidence 3333338899999986422 22222 233578899999988766676778899999754322 1111 111123467
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 303 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
.++++|+++++++...++.|.+||............+...+..+++.++|.++++...++.|.+|+..
T Consensus 154 ~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp CEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred eEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 89999999988877778999999987665443333344678999999999888888888999999874
No 208
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.82 E-value=4.7e-07 Score=89.54 Aligned_cols=179 Identities=9% Similarity=-0.022 Sum_probs=107.2
Q ss_pred cccCCCeEEEEecCCCcee-EEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCc-------------
Q 017296 167 AGEQLSEVEIWDLNTAERC-TRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS------------- 232 (374)
Q Consensus 167 ~~~~d~~i~vWd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~------------- 232 (374)
.|+.+.+|++||+.+++.+ ............ .+.++ +. .|+.++.|..
T Consensus 142 ~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~--------------~wspD---g~-~l~~~~~d~~~~~~~~~~~~~~~ 203 (695)
T 2bkl_A 142 NAADEAVLHVIDVDSGEWSKVDVIEGGKYATP--------------KWTPD---SK-GFYYEWLPTDPSIKVDERPGYTT 203 (695)
T ss_dssp TTCSCCEEEEEETTTCCBCSSCCBSCCTTCCC--------------EECTT---SS-EEEEEECCCCTTSCGGGGGGGCE
T ss_pred CCCceEEEEEEECCCCCCcCCcccCcccccce--------------EEecC---CC-EEEEEEecCCCCCccccCCCCCE
Confidence 4455679999999998754 111000000011 13322 22 4666666655
Q ss_pred EEEEeccCCCC---ceeeeecCccCeEEEEEecCCCceEEEecCC----eEEEEEcCCCCCeEEEEEeeecCCCCeEEEE
Q 017296 233 ILVWDIRNPGI---PLTAMKVHLEPVLCLSIDESCNGGISGGADQ----KIVLYNLDHSTGSCVIKKEINLERPGISGTS 305 (374)
Q Consensus 233 i~iwdl~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~----~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (374)
|++|++.+... .+.....|...+..+.+++++..++.++.++ .|.+|+... +.... +..+........
T Consensus 204 v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~--~~~~~---l~~~~~~~~~~~ 278 (695)
T 2bkl_A 204 IRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE--KDFRL---LVKGVGAKYEVH 278 (695)
T ss_dssp EEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC--SSCEE---EEECSSCCEEEE
T ss_pred EEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC--CceEE---eecCCCceEEEE
Confidence 99999975431 2222233456788999999999888777665 555554432 22111 111223344445
Q ss_pred ECCCCCEEEEEeC---CCeEEEEEccCCeE---EEEeccc-CCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 306 IRPDSKIAATAGW---DRRVRIYNYRKGSA---LAILKYH-HATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 306 ~sp~~~~l~s~~~---dg~v~iwd~~~~~~---~~~~~~h-~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
+ |++++++.+.. ++.|.+||+.+++. ...+..+ ...+..++|+ ++.++++...|+..+||.+.
T Consensus 279 ~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 279 A-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp E-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred e-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 5 56665555442 58899999977653 3333333 4467888988 77899999999999999654
No 209
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.81 E-value=5.4e-06 Score=72.21 Aligned_cols=141 Identities=9% Similarity=-0.034 Sum_probs=96.9
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
..++...++.|..||. ...........+...+..+.+++++...++...++.|..||. . +.... .........+.
T Consensus 112 l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~--g~~~~-~~~~~~~~~~~ 186 (299)
T 2z2n_A 112 IWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-S--GDITE-FKIPTPASGPV 186 (299)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-T--CCEEE-EECSSTTCCEE
T ss_pred EEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C--CcEEE-eeCCCCCCcce
Confidence 3455556789999998 322222222234457889999998876666666789999987 2 22221 11222234578
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCeEEE-EecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 303 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALA-ILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
.+++++++++.++...++.|.+||. +++... .+..+...+..+++.++|++.++...++.|..|+.
T Consensus 187 ~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 187 GITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred eEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 9999999998887777899999998 666432 23335567899999999998777767788888875
No 210
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.80 E-value=3.7e-06 Score=82.81 Aligned_cols=54 Identities=17% Similarity=0.143 Sum_probs=43.2
Q ss_pred CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCCC
Q 017296 319 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPPH 373 (374)
Q Consensus 319 dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~~ 373 (374)
+|++..||+.+++.+..++.+. .+..-.+...+.+++.++.|+.++.||...+.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred ceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 4789999999999988876544 33444666788899999999999999987653
No 211
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.79 E-value=2.1e-07 Score=83.46 Aligned_cols=123 Identities=11% Similarity=0.078 Sum_probs=82.1
Q ss_pred CcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCC-------eEEEEEcCCCCCeEEEEEeeecCCCCeEE
Q 017296 231 GSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQ-------KIVLYNLDHSTGSCVIKKEINLERPGISG 303 (374)
Q Consensus 231 g~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~-------~i~lwd~~~~~~~~~~~~~~~~~~~~v~~ 303 (374)
..|.+||+... ..+..+.. . .+..+.++|++ .+++++.++ ...+|.++ ++....... + ..+..
T Consensus 152 ~~l~~~d~~~~-~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~---~-~~~~~ 221 (347)
T 2gop_A 152 TTFWIFDTESE-EVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFE---K-VSFYA 221 (347)
T ss_dssp EEEEEEETTTT-EEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEE---E-ESEEE
T ss_pred ceEEEEECCCC-eEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEecc---C-cceee
Confidence 57889998653 32234444 3 78889999998 666665542 55677665 333221111 1 22333
Q ss_pred EEECCCCCEEEEEeCC--------CeEEEEEccCCeEEEEecccCCceEE-EEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 304 TSIRPDSKIAATAGWD--------RRVRIYNYRKGSALAILKYHHATCNA-VSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 304 ~~~sp~~~~l~s~~~d--------g~v~iwd~~~~~~~~~~~~h~~~v~~-v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
++|||++|+.++.+ ..|.+|| +++.......|...+.. +.|+ |+ ++++++.|+.++|| +.
T Consensus 222 --~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 222 --VDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp --EEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred --ECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 39999998877754 3677777 56554445566778886 8999 88 99999999999999 75
No 212
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.76 E-value=2.7e-06 Score=83.61 Aligned_cols=52 Identities=10% Similarity=0.130 Sum_probs=42.9
Q ss_pred CeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 320 RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 320 g~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
|+|..||+.+++.+..+. +...++...+..++.+++.++.|+.+++||...+
T Consensus 457 g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp EEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence 789999999999988776 4445556667788888999999999999998755
No 213
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.76 E-value=3.4e-05 Score=68.63 Aligned_cols=107 Identities=14% Similarity=0.181 Sum_probs=73.8
Q ss_pred cCeEEEEEecCCCceE-EEecCCeEEEEEcCCCCC-e----EEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q 017296 253 EPVLCLSIDESCNGGI-SGGADQKIVLYNLDHSTG-S----CVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 326 (374)
Q Consensus 253 ~~v~~~~~~~~~~~~~-s~s~D~~i~lwd~~~~~~-~----~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd 326 (374)
.....+++++++..++ +.+.++.|.+||++..++ . ..+ ............+++.+++.+.++...++.|.+||
T Consensus 179 ~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~-~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d 257 (326)
T 2ghs_A 179 SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVF-IDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYD 257 (326)
T ss_dssp SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEE-EECTTSSSEEEEEEECTTSCEEEEEETTTEEEEEC
T ss_pred cccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEE-EECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEEC
Confidence 3456788898887654 445678999999862222 1 111 11111223467899999999888777778999999
Q ss_pred ccCCeEEEEecccCCceEEEEEe-CCCCEE-EEEeCC
Q 017296 327 YRKGSALAILKYHHATCNAVSFS-SDCKLM-ASASED 361 (374)
Q Consensus 327 ~~~~~~~~~~~~h~~~v~~v~~s-p~~~~l-as~s~D 361 (374)
. +++.+..+..+...+.+++|. |+++.| ++...+
T Consensus 258 ~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 258 T-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp T-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred C-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 8 677777777777789999998 888755 444444
No 214
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.73 E-value=1.3e-06 Score=79.03 Aligned_cols=267 Identities=11% Similarity=-0.028 Sum_probs=145.3
Q ss_pred EEEEecCCC----cEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeecc----------ccCeEEEEecCCCC
Q 017296 32 ILFAGTTGG----ELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG----------RDGTVKCWDIENGG 97 (374)
Q Consensus 32 ~l~s~s~D~----~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~----------~D~~vrvwd~~~~~ 97 (374)
..++...++ +|.|.|..+++.+.++...... .+.+++ ++++++.+. .+++|.+||+.+++
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P----~i~~sp--Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS----LAVAGH--SGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC----EEEECT--TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC----ceEECC--CCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 444555455 7889999999888777644322 355666 556666553 47899999999874
Q ss_pred CCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEccc-CCCeEEE
Q 017296 98 LSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGE-QLSEVEI 176 (374)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~i~v 176 (374)
... .+... ..+.. .....+... .++++++ ++.++.. ..+.+.+
T Consensus 108 vv~----~I~v~----------~~~~~----------~~g~~P~~i-----------a~SpDGk-~lyVan~~~~~~v~V 151 (368)
T 1mda_H 108 PIA----DIELP----------DAPRF----------SVGPRVHII-----------GNCASSA-CLLFFLFGSSAAAGL 151 (368)
T ss_dssp EEE----EEEET----------TSCSC----------CBSCCTTSE-----------EECTTSS-CEEEEECSSSCEEEE
T ss_pred EEE----EEECC----------Ccccc----------ccCCCcceE-----------EEcCCCC-EEEEEccCCCCeEEE
Confidence 311 11000 00000 000001110 1223443 3444332 2467888
Q ss_pred --EecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccC----CCCcee----
Q 017296 177 --WDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN----PGIPLT---- 246 (374)
Q Consensus 177 --Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~----~~~~~~---- 246 (374)
+|+.+ +..+....+ .. +.+ .+...+++.+.||.+...|+.. .+....
T Consensus 152 ~~iD~~t---v~~i~v~~~-----------~~------~~p---~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~ 208 (368)
T 1mda_H 152 SVPGASD---DQLTKSASC-----------FH------IHP---GAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG 208 (368)
T ss_dssp EETTTEE---EEEEECSSC-----------CC------CEE---EETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCT
T ss_pred EEEchhh---ceEEECCCc-----------eE------Ecc---CCCeEEEEEcCCCCEEEEECccccccCCeEEEEeee
Confidence 99887 333321100 00 001 1111355667788888888864 111110
Q ss_pred eeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeec-------CC---CCeEEEEECCCCCEEEEE
Q 017296 247 AMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL-------ER---PGISGTSIRPDSKIAATA 316 (374)
Q Consensus 247 ~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~-------~~---~~v~~~~~sp~~~~l~s~ 316 (374)
.+.....|. . .+++..++..+. +.+.+.|+...+.... ..+.. .. .+...++|+||++.+..+
T Consensus 209 ~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~--~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~ 281 (368)
T 1mda_H 209 AQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMK--AAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMIL 281 (368)
T ss_dssp TSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEE--CCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEE
T ss_pred eeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEE--EEEEeccccccccccccCcceeeEEcCCCCEEEEE
Confidence 011122343 2 344444455555 8888888754322211 11110 00 111227899998877654
Q ss_pred eC---------CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCC-EEEEEe-CCCcEEEecCCC
Q 017296 317 GW---------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCK-LMASAS-EDSTVALWELYP 371 (374)
Q Consensus 317 ~~---------dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-~las~s-~D~~v~~W~~~~ 371 (374)
.. ++.+.++|+.+.+.+..+.... ....++|+|||+ ++++.. .+++|.++|...
T Consensus 282 ~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 282 TVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp EEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSS
T ss_pred eccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCC
Confidence 32 2356699999999888776444 688999999998 566667 599999999854
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.72 E-value=3.5e-08 Score=89.85 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=38.6
Q ss_pred CCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCC
Q 017296 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGG 97 (374)
Q Consensus 29 ~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~ 97 (374)
++.+|++++.|+.|..||..+|+.+-.+.. ..+.+..+.. ++..+++++.|+.|+.||..+|+
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~----~~~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~ 70 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE----DPVLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNE 70 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC----CCSCCCC-------CCEEECTTTCCEEEC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC----CCceecceEc--CCCEEEEeCCCCEEEEEECCCCc
Confidence 577899999999999999999887644432 1222222222 34567777889999999998774
No 216
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.72 E-value=5.2e-05 Score=68.86 Aligned_cols=259 Identities=11% Similarity=0.022 Sum_probs=138.9
Q ss_pred CeEEeecCCCceeEEEEeCCCCEEEEec----------CCCcEEEEeCcccceeeeeeee-ec----eeeeEEeccCCcc
Q 017296 10 PVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVH-SA----AHGIVSVATGPSI 74 (374)
Q Consensus 10 ~~~~l~gH~~~V~~l~~~~~~~~l~s~s----------~D~~v~vWd~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~ 74 (374)
.+.++..-..+ .++|+|||++|+.+. .+++|.++|..+.+.+..+... .. ...-..+.+++
T Consensus 59 ~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-- 134 (373)
T 2mad_H 59 ILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP-- 134 (373)
T ss_pred EEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC--
Confidence 33444433333 889999999988875 3678999999887766554321 00 00012345555
Q ss_pred ccceeeeccc--cCeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCC
Q 017296 75 GLNKVISQGR--DGTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDS 152 (374)
Q Consensus 75 ~~~~l~s~~~--D~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (374)
++++|+.+.. +.+|.++| .+++... .+ .....|. .
T Consensus 135 DG~~l~v~n~~~~~~v~viD-~t~~~~~----~~--i~~~~~~---------------------~--------------- 171 (373)
T 2mad_H 135 NNADLLFFQFAAGPAVGLVV-QGGSSDD----QL--LSSPTCY---------------------H--------------- 171 (373)
T ss_pred CCCEEEEEecCCCCeEEEEE-CCCCEEe----EE--cCCCceE---------------------E---------------
Confidence 6778777653 57899999 8774311 00 0000000 0
Q ss_pred CCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCc
Q 017296 153 KDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGS 232 (374)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~ 232 (374)
+.+.++..+ ++...|+++.++|+ +++......... .+ .....+... ..+.++ +...++. +..+.
T Consensus 172 ---~~~~~~~~~-~~~~~dg~~~~vd~-~g~~~~~~~~~~-----~~-~~~~p~~~~-~~~~~~---~~~~~~~-~~~~~ 235 (373)
T 2mad_H 172 ---IHPGAPSTF-YLLCAQGGLAKTDH-AGGAAGAGLVGA-----ML-TAAQNLLTQ-PAQANK---SGRIVWP-VYSGK 235 (373)
T ss_pred ---EEeCCCceE-EEEcCCCCEEEEEC-CCcEEEEEeccc-----cc-cCCcceeec-ceeEec---CCEEEEE-cCCce
Confidence 001122222 23445788999999 776543221100 00 000000000 011111 1112333 35678
Q ss_pred EEEEeccCCCCc-eeeeec----------CccCeEEEEEecCCCceEEEec----------CCeEEEEEcCCCCCeEEEE
Q 017296 233 ILVWDIRNPGIP-LTAMKV----------HLEPVLCLSIDESCNGGISGGA----------DQKIVLYNLDHSTGSCVIK 291 (374)
Q Consensus 233 i~iwdl~~~~~~-~~~~~~----------h~~~v~~~~~~~~~~~~~s~s~----------D~~i~lwd~~~~~~~~~~~ 291 (374)
|.+.|+...... ...+.. .......+.+++++..++.+.. .+.|.+.|+... +..
T Consensus 236 v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~--~vv-- 311 (373)
T 2mad_H 236 ILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG--QTS-- 311 (373)
T ss_pred EEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC--EEE--
Confidence 888888542211 111110 1122344677877776655432 357888887643 222
Q ss_pred EeeecCCCCeEEEEECCCCC-EEEEEe-CCCeEEEEEccCCeEEEEe
Q 017296 292 KEINLERPGISGTSIRPDSK-IAATAG-WDRRVRIYNYRKGSALAIL 336 (374)
Q Consensus 292 ~~~~~~~~~v~~~~~sp~~~-~l~s~~-~dg~v~iwd~~~~~~~~~~ 336 (374)
..+... .....++|+||++ +++++. .+++|.++|..+++.++++
T Consensus 312 ~~i~~g-~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 312 SQISLG-HDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEEECC-CCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 222221 2477899999999 777777 4899999999999988774
No 217
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.69 E-value=1.1e-05 Score=79.43 Aligned_cols=79 Identities=10% Similarity=0.126 Sum_probs=53.3
Q ss_pred CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccC-CceEEEEEeCCC
Q 017296 274 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH-ATCNAVSFSSDC 352 (374)
Q Consensus 274 ~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-~~v~~v~~sp~~ 352 (374)
+.|..||+.+ ++........ ....+..+.+++.+++.++.||.+++||.++++.+..+.... ....-+.|.++|
T Consensus 457 g~l~A~D~~t--G~~~W~~~~~---~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G 531 (677)
T 1kb0_A 457 GRLLAWDPVA--QKAAWSVEHV---SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDG 531 (677)
T ss_dssp EEEEEEETTT--TEEEEEEEES---SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred cEEEEEeCCC--CcEEeecCCC---CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCC
Confidence 7899999864 4443333221 123344566677788889999999999999999998886433 223345677899
Q ss_pred C-EEEE
Q 017296 353 K-LMAS 357 (374)
Q Consensus 353 ~-~las 357 (374)
+ +++.
T Consensus 532 ~~~v~~ 537 (677)
T 1kb0_A 532 RQYVSV 537 (677)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 8 4444
No 218
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.69 E-value=4.8e-06 Score=82.04 Aligned_cols=82 Identities=13% Similarity=0.164 Sum_probs=55.0
Q ss_pred CCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCC-ceEEEEEeCC
Q 017296 273 DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHA-TCNAVSFSSD 351 (374)
Q Consensus 273 D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~-~v~~v~~sp~ 351 (374)
+|+++.||+.+. +....... +.. ...-.++..+.+++.|+.||.++.||.++|+.+..++.+.. ...-+.|..|
T Consensus 454 ~g~l~A~D~~tG--~~~W~~~~--~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 454 SGKLIAWDPVKQ--QAAWEVPY--VTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp EEEEEEEETTTT--EEEEEEEE--SSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred ceeEEEEECCCC--CeEeEccC--CCC-ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEEC
Confidence 478999998644 44333222 211 22235556677888999999999999999999988875432 2234677889
Q ss_pred CC-EEEEEe
Q 017296 352 CK-LMASAS 359 (374)
Q Consensus 352 ~~-~las~s 359 (374)
|+ +++..+
T Consensus 529 G~qyv~~~~ 537 (689)
T 1yiq_A 529 GEQYVTFMA 537 (689)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 98 555443
No 219
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.66 E-value=1.1e-08 Score=93.22 Aligned_cols=177 Identities=11% Similarity=0.014 Sum_probs=91.6
Q ss_pred EEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCc
Q 017296 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIP 244 (374)
Q Consensus 165 ~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~ 244 (374)
+++++.|+.|..||..+|+.+..+.... .... .+. ..+ ..+++++.||.|..||.++...
T Consensus 12 v~~gs~dg~v~a~d~~tG~~~W~~~~~~------------~~s~---p~~---~~g-~~~v~~s~dg~l~a~d~~tG~~- 71 (369)
T 2hz6_A 12 LFVSTLDGSLHAVSKRTGSIKWTLKEDP------------VLQV---PTH---VEE-PAFLPDPNDGSLYTLGSKNNEG- 71 (369)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEECCC------------SCCC---C---------CCEEECTTTCCEEEC-----CC-
T ss_pred EEEEcCCCEEEEEECCCCCEEEEecCCC------------ceec---ceE---cCC-CEEEEeCCCCEEEEEECCCCce-
Confidence 4556678999999999999876664310 0000 011 112 1366678999999999865332
Q ss_pred eeeeecCcc-CeE-EEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeE
Q 017296 245 LTAMKVHLE-PVL-CLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRV 322 (374)
Q Consensus 245 ~~~~~~h~~-~v~-~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v 322 (374)
+-....+.. .+. ...+.. ...+++++.|+.+..||.+.+.. ..... .+. ...++|++..+++++.|+.|
T Consensus 72 ~w~~~~~~~~~~~~sp~~~~-~~~v~~g~~dg~v~a~D~~tG~~--~w~~~--~~~----~~~~~p~~~~v~~~~~dg~v 142 (369)
T 2hz6_A 72 LTKLPFTIPELVQASPCRSS-DGILYMGKKQDIWYVIDLLTGEK--QQTLS--SAF----ADSLSPSTSLLYLGRTEYTI 142 (369)
T ss_dssp SEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEE
T ss_pred eeeeeccCccccccCceEec-CCEEEEEeCCCEEEEEECCCCcE--EEEec--CCC----cccccccCCEEEEEecCCEE
Confidence 222222211 010 001111 23467788899999999865432 22111 111 23567788889999999999
Q ss_pred EEEEccCCeEEEEecccCCceEEEEEeCCC---CEEEEEeCCCcEEEecCCCC
Q 017296 323 RIYNYRKGSALAILKYHHATCNAVSFSSDC---KLMASASEDSTVALWELYPP 372 (374)
Q Consensus 323 ~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~---~~las~s~D~~v~~W~~~~~ 372 (374)
..||.++++.+..+..+. ....++.++. ..++.++.|+.|+.||...+
T Consensus 143 ~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG 193 (369)
T 2hz6_A 143 TMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESG 193 (369)
T ss_dssp ECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTC
T ss_pred EEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCC
Confidence 999999998776654322 1223333332 45667888999999998654
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.64 E-value=6.9e-06 Score=75.70 Aligned_cols=183 Identities=10% Similarity=-0.013 Sum_probs=111.7
Q ss_pred EEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCC--cEEEEeccCC
Q 017296 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDG--SILVWDIRNP 241 (374)
Q Consensus 164 ~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg--~i~iwdl~~~ 241 (374)
+.++...++.|+.||+.+++......... ... + .+.+ .+. .++++..++ .|..||....
T Consensus 144 lyv~d~~~~~I~~id~~~g~~~~~~~~~~---------~~~---i---a~~~---~g~-~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 144 VLAYQRDDPRVRLISVDDNKVTTVHPGFK---------GGK---P---AVTK---DKQ-RVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEETCC---------BCB---C---EECT---TSS-EEEEEBSSTTCEEEEEEGGGT
T ss_pred EEEEecCCCcEEEEECCCCEEEEeeccCC---------CCc---e---eEec---CCC-cEEEEecCCCceEEEEEcCCC
Confidence 44455567899999998876543332110 000 1 1222 122 455665544 7888887643
Q ss_pred CCceeee----ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEe--eecCCCCe-E-EEEECCC-CCE
Q 017296 242 GIPLTAM----KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE--INLERPGI-S-GTSIRPD-SKI 312 (374)
Q Consensus 242 ~~~~~~~----~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~--~~~~~~~v-~-~~~~sp~-~~~ 312 (374)
.. ...+ ......+..++++++...++.+..++.|..||.+... ...... .......- . .++|+|+ +.+
T Consensus 205 ~~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~--~~~~~~~~~~g~~~~~P~~~ia~~p~~g~l 281 (409)
T 3hrp_A 205 WA-PTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE--VTLIKQLELSGSLGTNPGPYLIYYFVDSNF 281 (409)
T ss_dssp TC-EEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC--EEEEEECCCCSCCCCSSCCEEEEETTTTEE
T ss_pred ce-eEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC--EEEEecccccCCCCCCccccEEEeCCCCEE
Confidence 22 2222 1144567889999854456667778899999987543 221111 11111111 2 8999995 666
Q ss_pred EEEEeCCCeEEEEEccCCeEEEEecccC---------------CceEEEEEeCCCCEEEEEe-CCCcEEEecCC
Q 017296 313 AATAGWDRRVRIYNYRKGSALAILKYHH---------------ATCNAVSFSSDCKLMASAS-EDSTVALWELY 370 (374)
Q Consensus 313 l~s~~~dg~v~iwd~~~~~~~~~~~~h~---------------~~v~~v~~sp~~~~las~s-~D~~v~~W~~~ 370 (374)
+++-..+++|+.|+.. ++ +..+.++. .....++++|+|+++++-+ .+..|+.|++.
T Consensus 282 yv~d~~~~~I~~~~~~-g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~ 353 (409)
T 3hrp_A 282 YMSDQNLSSVYKITPD-GE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDIL 353 (409)
T ss_dssp EEEETTTTEEEEECTT-CC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETT
T ss_pred EEEeCCCCEEEEEecC-CC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECC
Confidence 6777778999999875 33 33343332 4588999999999888888 89999999853
No 221
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.60 E-value=7.1e-06 Score=81.70 Aligned_cols=134 Identities=5% Similarity=-0.015 Sum_probs=85.6
Q ss_pred cEEEEeccCCCC-ceeeeec--CccCeEEEEEecCCCceEEEecCC-----eEEEEEcCCCCCe-EEEEEeeecCCCCeE
Q 017296 232 SILVWDIRNPGI-PLTAMKV--HLEPVLCLSIDESCNGGISGGADQ-----KIVLYNLDHSTGS-CVIKKEINLERPGIS 302 (374)
Q Consensus 232 ~i~iwdl~~~~~-~~~~~~~--h~~~v~~~~~~~~~~~~~s~s~D~-----~i~lwd~~~~~~~-~~~~~~~~~~~~~v~ 302 (374)
.|.+|++.+... ....+.. +...+..+.+++++..++..+.++ .|.+||++..... .. .+..+.....
T Consensus 244 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~---~l~~~~~~~~ 320 (741)
T 1yr2_A 244 TVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT---ALIPDLKAQW 320 (741)
T ss_dssp EEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCE---EEECSSSSCE
T ss_pred EEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccE---EecCCCCceE
Confidence 488999865321 1122222 233578899999998888776544 8999998754111 11 1112222333
Q ss_pred EEEECCCCCEEEEEeC----CCeEEEEEccCC--eEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 303 GTSIRPDSKIAATAGW----DRRVRIYNYRKG--SALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~----dg~v~iwd~~~~--~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
.. ++|+++.|+..+. ++.|.+||+.++ +....+..+...+..++|. ++.++++...|+..+||.+.
T Consensus 321 ~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 321 DF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 33 3588888877765 345999999874 3334455555667778887 66788999999999998653
No 222
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.59 E-value=0.00015 Score=62.82 Aligned_cols=141 Identities=6% Similarity=-0.052 Sum_probs=95.6
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
..++...++.|..||.. .......+......+..+.+++++...++...++.|..+|.+ +.... .........+.
T Consensus 117 l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~---g~~~~-~~~~~~~~~~~ 191 (300)
T 2qc5_A 117 IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITNT---GKLEE-YPLPTNAAAPV 191 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT---CCEEE-EECSSTTCCEE
T ss_pred EEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECCC---CcEEE-eeCCCCCCCcc
Confidence 34555557889999875 222212222234578899999988755566567889999873 22221 11222234578
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCeEEEE-ecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 303 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAI-LKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
.+++.+++++.++....+.|.+||. +++.... +..+...+.++++.++|++.++...++.|..|+.
T Consensus 192 ~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 192 GITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN 258 (300)
T ss_dssp EEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT
T ss_pred eEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC
Confidence 9999999988887777789999998 5554332 3344567899999999997777766788888875
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.58 E-value=0.00024 Score=64.28 Aligned_cols=268 Identities=8% Similarity=0.060 Sum_probs=146.5
Q ss_pred CCCEEEEecCCCcEEEEeCcccceeeeeeeeec-------eeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCC
Q 017296 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSA-------AHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSN 101 (374)
Q Consensus 29 ~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~ 101 (374)
.+..|+.++.++.|..+|..+|+.+-....... ...+.. .+..++..++.++.|+.|..+|..+|+..
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~v~~~~g~l~a~d~~tG~~~-- 126 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG---GVTVSGGHVYIGSEKAQVYALNTSDGTVA-- 126 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE---EEEEETTEEEEEETTSEEEEEETTTCCEE--
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc---CceEeCCEEEEEcCCCEEEEEECCCCCEE--
Confidence 466788888899999999998876533222110 011111 11113357778888999999999988521
Q ss_pred CceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCC
Q 017296 102 PSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT 181 (374)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~ 181 (374)
..... .. .. ... ....+. .++.+..++.+..+|.++
T Consensus 127 --W~~~~----------~~-~~-----~~~------------------------p~~~~~--~v~v~~~~g~l~~~d~~t 162 (376)
T 3q7m_A 127 --WQTKV----------AG-EA-----LSR------------------------PVVSDG--LVLIHTSNGQLQALNEAD 162 (376)
T ss_dssp --EEEEC----------SS-CC-----CSC------------------------CEEETT--EEEEECTTSEEEEEETTT
T ss_pred --EEEeC----------CC-ce-----EcC------------------------CEEECC--EEEEEcCCCeEEEEECCC
Confidence 00000 00 00 000 000111 233455678999999999
Q ss_pred CceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCcc-------C
Q 017296 182 AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLE-------P 254 (374)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~-------~ 254 (374)
++.+......... ...... .... . ..+ .++.++.++.|..+|.++.. .+-....... .
T Consensus 163 G~~~W~~~~~~~~----~~~~~~--~~~~--~----~~~--~v~~g~~~g~l~~~d~~tG~-~~w~~~~~~~~~~~~~~~ 227 (376)
T 3q7m_A 163 GAVKWTVNLDMPS----LSLRGE--SAPT--T----AFG--AAVVGGDNGRVSAVLMEQGQ-MIWQQRISQATGSTEIDR 227 (376)
T ss_dssp CCEEEEEECCC---------CCC--CCCE--E----ETT--EEEECCTTTEEEEEETTTCC-EEEEEECCC---------
T ss_pred CcEEEEEeCCCCc----eeecCC--CCcE--E----ECC--EEEEEcCCCEEEEEECCCCc-EEEEEecccCCCCccccc
Confidence 9877665432100 000000 0000 0 012 47778889999999987543 2222211100 0
Q ss_pred ---eEE-EEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCC
Q 017296 255 ---VLC-LSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG 330 (374)
Q Consensus 255 ---v~~-~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~ 330 (374)
+.. ..+. ...++.++.++.+..+|.+.. ....... .......... +..|..++.++.+..+|..++
T Consensus 228 ~~~~~~~p~~~--~~~v~~~~~~g~l~~~d~~tG--~~~w~~~----~~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG 297 (376)
T 3q7m_A 228 LSDVDTTPVVV--NGVVFALAYNGNLTALDLRSG--QIMWKRE----LGSVNDFIVD--GNRIYLVDQNDRVMALTIDGG 297 (376)
T ss_dssp --CCCCCCEEE--TTEEEEECTTSCEEEEETTTC--CEEEEEC----CCCEEEEEEE--TTEEEEEETTCCEEEEETTTC
T ss_pred ccccCCCcEEE--CCEEEEEecCcEEEEEECCCC--cEEeecc----CCCCCCceEE--CCEEEEEcCCCeEEEEECCCC
Confidence 101 0111 234677788999999988643 3332222 1223333333 456777888999999999999
Q ss_pred eEEEEeccc-CCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 331 SALAILKYH-HATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 331 ~~~~~~~~h-~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
+.+...... ...+..... .+..|..++.++.|..+|...+
T Consensus 298 ~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG 338 (376)
T 3q7m_A 298 VTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDG 338 (376)
T ss_dssp CEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTC
T ss_pred cEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCC
Confidence 988766522 222222233 2456777888999999887654
No 224
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.53 E-value=3.8e-05 Score=67.33 Aligned_cols=182 Identities=13% Similarity=0.073 Sum_probs=108.9
Q ss_pred eEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC
Q 017296 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~ 242 (374)
.+.++...++.|..||..+++.. .+... .....+ .+. ..+. ++.+. ++.|.+||.++..
T Consensus 26 ~l~~~d~~~~~i~~~d~~~~~~~-~~~~~-----------~~~~~i---~~~---~dG~--l~v~~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 26 SLLFVDIPAKKVCRWDSFTKQVQ-RVTMD-----------APVSSV---ALR---QSGG--YVATI-GTKFCALNWKEQS 84 (297)
T ss_dssp EEEEEETTTTEEEEEETTTCCEE-EEECS-----------SCEEEE---EEB---TTSS--EEEEE-TTEEEEEETTTTE
T ss_pred EEEEEECCCCEEEEEECCCCcEE-EEeCC-----------CceEEE---EEC---CCCC--EEEEE-CCeEEEEECCCCc
Confidence 34455566789999999887642 22110 011111 122 2233 44444 5689999986432
Q ss_pred Cceeeeec-----CccCeEEEEEecCCCceEEEec---------CCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECC
Q 017296 243 IPLTAMKV-----HLEPVLCLSIDESCNGGISGGA---------DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRP 308 (374)
Q Consensus 243 ~~~~~~~~-----h~~~v~~~~~~~~~~~~~s~s~---------D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp 308 (374)
+..+.. ....++.+.+++++...++... .....+|.++.. +....... .......++|+|
T Consensus 85 --~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~---~~~~pngi~~sp 158 (297)
T 3g4e_A 85 --AVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFD---QVDISNGLDWSL 158 (297)
T ss_dssp --EEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEE---EESBEEEEEECT
T ss_pred --EEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEee---ccccccceEEcC
Confidence 222211 1235788999999885554422 234566666543 22211111 112357899999
Q ss_pred CCCEE-EEEeCCCeEEEEEc--cCCeE-----EEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 309 DSKIA-ATAGWDRRVRIYNY--RKGSA-----LAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 309 ~~~~l-~s~~~dg~v~iwd~--~~~~~-----~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
|++.| ++.+.++.|.+||+ .+++. +..+..+...+..+++.++|++.++...++.|..|+...
T Consensus 159 dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 159 DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 99866 45566899999997 44432 223333456788899999999888888888899998753
No 225
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.53 E-value=0.0001 Score=66.71 Aligned_cols=274 Identities=12% Similarity=0.083 Sum_probs=147.1
Q ss_pred CCCEEEEecCCCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeeccccCeEEEEecCCCCCCCCCceeeee
Q 017296 29 TKPILFAGTTGGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQGRDGTVKCWDIENGGLSSNPSLTIKT 108 (374)
Q Consensus 29 ~~~~l~s~s~D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~D~~vrvwd~~~~~~~~~~~~~~~~ 108 (374)
++..|+.++.++.|..+|..+|+.+-...... .+ ...+...+..++.++.++.|..+|..+|+.. .....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~---~~---~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~----W~~~~ 171 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAG---EA---LSRPVVSDGLVLIHTSNGQLQALNEADGAVK----WTVNL 171 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSS---CC---CSCCEEETTEEEEECTTSEEEEEETTTCCEE----EEEEC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCC---ce---EcCCEEECCEEEEEcCCCeEEEEECCCCcEE----EEEeC
Confidence 45677778889999999999887653332211 11 1111112356778888999999999888521 00000
Q ss_pred cceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEEEcccCCCeEEEEecCCCceeEEe
Q 017296 109 NSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNTAERCTRL 188 (374)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~~~~~~~~ 188 (374)
.. +... ..... .....+ . .++.+..++.+..+|.++++.+...
T Consensus 172 ----------~~-~~~~------------~~~~~------------~~~~~~-~-~v~~g~~~g~l~~~d~~tG~~~w~~ 214 (376)
T 3q7m_A 172 ----------DM-PSLS------------LRGES------------APTTAF-G-AAVVGGDNGRVSAVLMEQGQMIWQQ 214 (376)
T ss_dssp ----------CC------------------CCCC------------CCEEET-T-EEEECCTTTEEEEEETTTCCEEEEE
T ss_pred ----------CC-Ccee------------ecCCC------------CcEEEC-C-EEEEEcCCCEEEEEECCCCcEEEEE
Confidence 00 0000 00000 000011 1 2344566789999999999876655
Q ss_pred ccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceE
Q 017296 189 HQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGI 268 (374)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 268 (374)
.............-.......+ . .. ..++.++.++.|..+|.++.. .+-.. .......+..+ +..++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~p~--~----~~--~~v~~~~~~g~l~~~d~~tG~-~~w~~--~~~~~~~~~~~--~~~l~ 281 (376)
T 3q7m_A 215 RISQATGSTEIDRLSDVDTTPV--V----VN--GVVFALAYNGNLTALDLRSGQ-IMWKR--ELGSVNDFIVD--GNRIY 281 (376)
T ss_dssp ECCC-----------CCCCCCE--E----ET--TEEEEECTTSCEEEEETTTCC-EEEEE--CCCCEEEEEEE--TTEEE
T ss_pred ecccCCCCcccccccccCCCcE--E----EC--CEEEEEecCcEEEEEECCCCc-EEeec--cCCCCCCceEE--CCEEE
Confidence 4221000000000000000000 0 01 147778889999999987643 22222 22334445444 33567
Q ss_pred EEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEE
Q 017296 269 SGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSF 348 (374)
Q Consensus 269 s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 348 (374)
.++.++.+..+|.+.. +....... ..........+ .+..|+.++.+|.+..+|..+++.+.........+.+...
T Consensus 282 ~~~~~g~l~~~d~~tG--~~~w~~~~-~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~ 356 (376)
T 3q7m_A 282 LVDQNDRVMALTIDGG--VTLWTQSD-LLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPV 356 (376)
T ss_dssp EEETTCCEEEEETTTC--CEEEEECT-TTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCE
T ss_pred EEcCCCeEEEEECCCC--cEEEeecc-cCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCE
Confidence 7888999999998644 33322220 11111222222 2456777889999999999999988777653333322111
Q ss_pred eCCCCEEEEEeCCCcEEEec
Q 017296 349 SSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 349 sp~~~~las~s~D~~v~~W~ 368 (374)
. .+..|..++.||.|..|+
T Consensus 357 ~-~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 357 A-ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp E-ETTEEEEEBTTSCEEEEE
T ss_pred E-ECCEEEEEeCCCEEEEEe
Confidence 1 244667788899999886
No 226
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.46 E-value=3.3e-05 Score=67.85 Aligned_cols=138 Identities=13% Similarity=0.138 Sum_probs=89.7
Q ss_pred EEEEecCCcEEEEeccCCCCceeee-e-----cCccCeEEEEEecCCCceEEEecC---------------CeEEEEEcC
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAM-K-----VHLEPVLCLSIDESCNGGISGGAD---------------QKIVLYNLD 282 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~-~-----~h~~~v~~~~~~~~~~~~~s~s~D---------------~~i~lwd~~ 282 (374)
+..+...+.|..||.. .. +..+ . .....+..+.+++++...++...+ +.|..+|.+
T Consensus 85 l~v~~~~~~l~~~d~~-g~--~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 161 (314)
T 1pjx_A 85 LFVADMRLGLLVVQTD-GT--FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD 161 (314)
T ss_dssp EEEEETTTEEEEEETT-SC--EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT
T ss_pred EEEEECCCCEEEEeCC-CC--EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC
Confidence 4455545579999986 32 2222 1 112458899999988766666555 456666543
Q ss_pred CCCCeEEEEEeeecCCCCeEEEEEC----CCCCEE-EEEeCCCeEEEEEcc-CCe-----EEEEecccC-CceEEEEEeC
Q 017296 283 HSTGSCVIKKEINLERPGISGTSIR----PDSKIA-ATAGWDRRVRIYNYR-KGS-----ALAILKYHH-ATCNAVSFSS 350 (374)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~v~~~~~s----p~~~~l-~s~~~dg~v~iwd~~-~~~-----~~~~~~~h~-~~v~~v~~sp 350 (374)
+....... .......++++ |+++.+ ++...++.|.+||.. +++ ....+..+. ..+..+++.+
T Consensus 162 ---g~~~~~~~---~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~ 235 (314)
T 1pjx_A 162 ---GQMIQVDT---AFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDE 235 (314)
T ss_dssp ---SCEEEEEE---EESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBT
T ss_pred ---CCEEEecc---CCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECC
Confidence 22221111 11236788999 999765 444568999999986 444 233344444 6688899999
Q ss_pred CCCEEEEEeCCCcEEEecCC
Q 017296 351 DCKLMASASEDSTVALWELY 370 (374)
Q Consensus 351 ~~~~las~s~D~~v~~W~~~ 370 (374)
+|+++++...++.|.+|+..
T Consensus 236 ~G~l~v~~~~~~~i~~~d~~ 255 (314)
T 1pjx_A 236 DNNLLVANWGSSHIEVFGPD 255 (314)
T ss_dssp TCCEEEEEETTTEEEEECTT
T ss_pred CCCEEEEEcCCCEEEEEcCC
Confidence 99998888888999999875
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.43 E-value=0.00022 Score=65.53 Aligned_cols=248 Identities=11% Similarity=0.092 Sum_probs=132.0
Q ss_pred EEEEeCCCCEEEEec----------CCCcEEEEeCcccceeeeeeee-ec----eeeeEEeccCCccccceeeeccc--c
Q 017296 23 DVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVH-SA----AHGIVSVATGPSIGLNKVISQGR--D 85 (374)
Q Consensus 23 ~l~~~~~~~~l~s~s----------~D~~v~vWd~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~l~s~~~--D 85 (374)
.++++|||++|+.+. .++.|.++|..+++.+..+... .. ...-..+.+++ ++++++.+.. +
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp--DGk~lyV~n~~~~ 199 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP--DNKNLLFYQFSPA 199 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT--TSSEEEEEECSSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC--CCCEEEEEecCCC
Confidence 789999999888775 4678999999998877665421 00 00011234555 6777776653 6
Q ss_pred CeEEEEecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCCCCCCCCCCCCCCceEE
Q 017296 86 GTVKCWDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSLCDSKDDVPAEGPKYMA 165 (374)
Q Consensus 86 ~~vrvwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (374)
++|-+.|+.+++... .+.. ..+. ... +.++..+
T Consensus 200 ~~VsVID~~t~kvv~----~I~v---~g~~---------------------~~~------------------p~g~~~~- 232 (426)
T 3c75_H 200 PAVGVVDLEGKTFDR----MLDV---PDCY---------------------HIF------------------PASPTVF- 232 (426)
T ss_dssp CEEEEEETTTTEEEE----EEEC---CSEE---------------------EEE------------------EEETTEE-
T ss_pred CeEEEEECCCCeEEE----EEEc---CCce---------------------eec------------------cCCCcEE-
Confidence 889999998764211 0100 0000 000 0011111
Q ss_pred EcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCce
Q 017296 166 VAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPL 245 (374)
Q Consensus 166 ~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~ 245 (374)
++.+.|+++.+.++.+++...... . .+......+... ..+.+ .+. .++..+..+.|.+.|+......+
T Consensus 233 v~~~~dG~~~~V~~~~~~v~~~~~-~------~~~v~~~p~~~~-~~~~~---dg~-~~~~~s~~g~V~ViD~~~~~~~v 300 (426)
T 3c75_H 233 YMNCRDGSLARVDFADGETKVTNT-E------VFHTEDELLINH-PAFSL---RSG-RLVWPTYTGKIFQADLTAEGATF 300 (426)
T ss_dssp EEEETTSSEEEEECCTTCCEEEEC-C------CCSCTTSCBCSC-CEECT---TTC-EEEEEBTTSEEEEEEECSSCEEE
T ss_pred EEEcCCCCEEEEECCCCcEEEEee-e------eeccCCCceeeE-eeecC---CCC-EEEEEeCCCcEEEEeccCCceEE
Confidence 222335666666765554432211 0 000000000000 01111 122 23333456889999885422100
Q ss_pred -eeee----------cCccCeEEEEEecCCCceEEEe----------cCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEE
Q 017296 246 -TAMK----------VHLEPVLCLSIDESCNGGISGG----------ADQKIVLYNLDHSTGSCVIKKEINLERPGISGT 304 (374)
Q Consensus 246 -~~~~----------~h~~~v~~~~~~~~~~~~~s~s----------~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~ 304 (374)
..+. ........+.+++++..++... .+++|.+.|+..... ...-... .....+
T Consensus 301 ~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv--v~~I~vg---~~P~gi 375 (426)
T 3c75_H 301 RAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER--INKIELG---HEIDSI 375 (426)
T ss_dssp CCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE--EEEEEEE---EEECEE
T ss_pred eeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE--EEEEECC---CCcCeE
Confidence 0000 0011222357887766555442 245799998865432 2111111 136789
Q ss_pred EECCCCC-EEEEEe-CCCeEEEEEccCCeEEEEe
Q 017296 305 SIRPDSK-IAATAG-WDRRVRIYNYRKGSALAIL 336 (374)
Q Consensus 305 ~~sp~~~-~l~s~~-~dg~v~iwd~~~~~~~~~~ 336 (374)
+|+||++ +++++. .+++|.++|..+++.++++
T Consensus 376 a~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 376 NVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred EEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 9999999 888888 4899999999999998887
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.34 E-value=8.3e-05 Score=67.14 Aligned_cols=264 Identities=9% Similarity=-0.005 Sum_probs=139.8
Q ss_pred CCeEEeecCCCceeEEEEeCCCCEEEEec----------CCCcEEEEeCcccceeeeeeeeece-----eeeEEeccCCc
Q 017296 9 DPVAVLRGHRASVTDVCFHQTKPILFAGT----------TGGELRIWDTVQHRTVSSSWVHSAA-----HGIVSVATGPS 73 (374)
Q Consensus 9 ~~~~~l~gH~~~V~~l~~~~~~~~l~s~s----------~D~~v~vWd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 73 (374)
+.+.++..-..+ .++|+|++++|+.+. .+++|.+||+.+++.+.++..+... ..-..+++++
T Consensus 57 ~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp- 133 (368)
T 1mda_H 57 VTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA- 133 (368)
T ss_dssp EEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT-
T ss_pred eEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC-
Confidence 344445433445 699999999988875 4789999999999888776543100 0112344555
Q ss_pred cccceeeeccc--cCeEEE--EecCCCCCCCCCceeeeecceeeeeeeeeccccccccccCCCCcccccccCceeecCCC
Q 017296 74 IGLNKVISQGR--DGTVKC--WDIENGGLSSNPSLTIKTNSYHFCKLSLVKEPYANAKQANEPKDCYEREVGETVDTDSL 149 (374)
Q Consensus 74 ~~~~~l~s~~~--D~~vrv--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (374)
|+++++.+.. +..+.+ +|+.+ . ..+... .| ..
T Consensus 134 -DGk~lyVan~~~~~~v~V~~iD~~t--v-----~~i~v~---~~---------------------~~------------ 169 (368)
T 1mda_H 134 -SSACLLFFLFGSSAAAGLSVPGASD--D-----QLTKSA---SC---------------------FH------------ 169 (368)
T ss_dssp -TSSCEEEEECSSSCEEEEEETTTEE--E-----EEEECS---SC---------------------CC------------
T ss_pred -CCCEEEEEccCCCCeEEEEEEchhh--c-----eEEECC---Cc---------------------eE------------
Confidence 6677776653 457888 88754 0 001000 00 00
Q ss_pred CCCCCCCCCCCCceEEEcccCCCeEEEEecCC-----CceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEE
Q 017296 150 CDSKDDVPAEGPKYMAVAGEQLSEVEIWDLNT-----AERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNV 224 (374)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~d~~i~vWd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (374)
..+.+...+ ++.+.|+.+.+.|+++ ++...... . ......... . . ..+. .+
T Consensus 170 ------~~p~g~~~~-~~~~~dg~~~~vd~~~~~~~~~~v~~~~t-~------~i~vg~~P~-----~-~---~~~~-~~ 225 (368)
T 1mda_H 170 ------IHPGAAATH-YLGSCPASLAASDLAAAPAAAGIVGAQCT-G------AQNCSSQAA-----Q-A---NYPG-ML 225 (368)
T ss_dssp ------CEEEETTEE-ECCCCTTSCEEEECCSSCCCCEECCCCSC-T------TSCBCSCCE-----E-E---TTTT-EE
T ss_pred ------EccCCCeEE-EEEcCCCCEEEEECccccccCCeEEEEee-e------eeeCCCCcc-----c-c---ccCC-EE
Confidence 001111222 2334456666667765 32211000 0 000000000 0 1 1122 23
Q ss_pred EEEecCCcEEEEeccCCCCc-eeeeec-------C---ccCeEEEEEecCCCceEEEec---------CCeEEEEEcCCC
Q 017296 225 LAGYEDGSILVWDIRNPGIP-LTAMKV-------H---LEPVLCLSIDESCNGGISGGA---------DQKIVLYNLDHS 284 (374)
Q Consensus 225 ~~gs~dg~i~iwdl~~~~~~-~~~~~~-------h---~~~v~~~~~~~~~~~~~s~s~---------D~~i~lwd~~~~ 284 (374)
+-.+. +.|.+.|+...... ...+.. + ......+.+++++..++.+.. ++.+.++|+...
T Consensus 226 ~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~ 304 (368)
T 1mda_H 226 VWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG 304 (368)
T ss_dssp EECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC
T ss_pred EEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC
Confidence 33334 88888888532111 111110 0 111222678888776665432 245669998754
Q ss_pred CCeEEEEEeeecCCCCeEEEEECCCCC-EEEEEe-CCCeEEEEEccCCeEEEEecccCCceEEEEEeC
Q 017296 285 TGSCVIKKEINLERPGISGTSIRPDSK-IAATAG-WDRRVRIYNYRKGSALAILKYHHATCNAVSFSS 350 (374)
Q Consensus 285 ~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~s~~-~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp 350 (374)
+ .. ..+... .....++|+||++ ++++.. .+++|.++|+.+++.++++..+. ..+.+++.+
T Consensus 305 ~--vv--~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~-~P~~i~~~~ 366 (368)
T 1mda_H 305 Q--TS--GPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK-GPESLSVQN 366 (368)
T ss_dssp C--EE--ECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS-CCCEEECCC
T ss_pred e--EE--EEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC-CCCEEEeec
Confidence 3 22 111111 1367899999998 456666 59999999999999998887543 455666654
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.32 E-value=6.1e-05 Score=74.35 Aligned_cols=134 Identities=7% Similarity=0.028 Sum_probs=80.2
Q ss_pred CcEEEEeccCCCC---ceeeeec-CccCeEEEEEecCCCceEEEec----CCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 231 GSILVWDIRNPGI---PLTAMKV-HLEPVLCLSIDESCNGGISGGA----DQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 231 g~i~iwdl~~~~~---~~~~~~~-h~~~v~~~~~~~~~~~~~s~s~----D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
..|++|++.+... .+..... |......+.+++++..++..+. ++.|.++|++........ +..+.....
T Consensus 208 ~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~---l~~~~~~~~ 284 (693)
T 3iuj_A 208 HKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLT---VQGDLDADV 284 (693)
T ss_dssp CEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEE---EECSSSSCE
T ss_pred cEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEE---EeCCCCceE
Confidence 4599999865422 1222222 3345678889999987754332 358999998765322221 122223333
Q ss_pred EEEECCCCCEE-EEEeCC---CeEEEEEccCCeE--EEEecccCCceEEEEEeCCCCEEEEEeC-CC--cEEEecCC
Q 017296 303 GTSIRPDSKIA-ATAGWD---RRVRIYNYRKGSA--LAILKYHHATCNAVSFSSDCKLMASASE-DS--TVALWELY 370 (374)
Q Consensus 303 ~~~~sp~~~~l-~s~~~d---g~v~iwd~~~~~~--~~~~~~h~~~v~~v~~sp~~~~las~s~-D~--~v~~W~~~ 370 (374)
.. ++++++.| +.+..+ +.|.++|+.+++. ...+..|...+. .|+|+++.|+.... |+ .|++|++.
T Consensus 285 ~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 285 SL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp EE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred EE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 33 56665554 455443 6799999987654 345555666665 89999997776554 44 57778764
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.31 E-value=1.8e-05 Score=69.67 Aligned_cols=141 Identities=10% Similarity=0.001 Sum_probs=92.3
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeec-CCCCe
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL-ERPGI 301 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~-~~~~v 301 (374)
.++++..++.|..|+.. .. ...+..+...+..+.+++++..+++...++.|.+|+.+ .. ...+...... ....+
T Consensus 59 l~~~d~~~~~i~~~~~~-g~--~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~-~~~~~~~~~~~~~~~~ 133 (305)
T 3dr2_A 59 LVWSDLVGRRVLGWRED-GT--VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ-AHLLVGRYAGKRLNSP 133 (305)
T ss_dssp EEEEETTTTEEEEEETT-SC--EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEECEETTEECSCC
T ss_pred EEEEECCCCEEEEEeCC-CC--EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC-EEEEEeccCCCccCCC
Confidence 46677788999999873 22 34455566778899999998855555556889999875 22 1111111111 11235
Q ss_pred EEEEECCCCCEEEE----EeC-------------CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCC---
Q 017296 302 SGTSIRPDSKIAAT----AGW-------------DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED--- 361 (374)
Q Consensus 302 ~~~~~sp~~~~l~s----~~~-------------dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D--- 361 (374)
..++++|+|++.++ |.. .+.|..||..+++.... . +....+.++|+||++.|..+..+
T Consensus 134 ~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~-~-~~~~p~gl~~spdg~~lyv~~~~~~~ 211 (305)
T 3dr2_A 134 NDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRM-A-DLDHPNGLAFSPDEQTLYVSQTPEQG 211 (305)
T ss_dssp CCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEE-E-EESSEEEEEECTTSSEEEEEECCC--
T ss_pred CCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEE-e-cCCCCcceEEcCCCCEEEEEecCCcC
Confidence 67999999998886 332 24577777766654332 2 44567889999999977666554
Q ss_pred ---CcEEEecCC
Q 017296 362 ---STVALWELY 370 (374)
Q Consensus 362 ---~~v~~W~~~ 370 (374)
+.|+.|++.
T Consensus 212 ~~~~~i~~~~~~ 223 (305)
T 3dr2_A 212 HGSVEITAFAWR 223 (305)
T ss_dssp -CCCEEEEEEEE
T ss_pred CCCCEEEEEEec
Confidence 688888764
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.29 E-value=0.0003 Score=62.09 Aligned_cols=171 Identities=11% Similarity=0.025 Sum_probs=102.4
Q ss_pred ccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceee
Q 017296 168 GEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTA 247 (374)
Q Consensus 168 ~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~ 247 (374)
++.++.+..+|.. ++.......... ...... .+ ..+ .+..++ +.|..|| .+ +..+..
T Consensus 153 gt~~~~l~~~d~~-g~~~~~~~~~~~----------~~~~~~-----~d-~~g--~l~v~t--~~l~~~d-~~-g~~~~~ 209 (330)
T 3hxj_A 153 GSNDNYLYAINPD-GTEKWRFKTNDA----------ITSAAS-----IG-KDG--TIYFGS--DKVYAIN-PD-GTEKWN 209 (330)
T ss_dssp ECTTSEEEEECTT-SCEEEEEECSSC----------CCSCCE-----EC-TTC--CEEEES--SSEEEEC-TT-SCEEEE
T ss_pred EcCCCEEEEECCC-CCEeEEEecCCC----------ceeeeE-----Ec-CCC--EEEEEe--CEEEEEC-CC-CcEEEE
Confidence 4556789999988 765544432100 000000 01 122 355566 8899998 43 333333
Q ss_pred eecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEc
Q 017296 248 MKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNY 327 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~ 327 (374)
.......+.++.+++++. ++.++.++.+..+|.+ +...... ........++.+.+++. |..++.+|.+..+|.
T Consensus 210 ~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~---g~~~~~~--~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 210 FYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD---GTEKWRF--KTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp ECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT---SCEEEEE--ECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred EccCCcceeceEECCCCe-EEEEcCCCeEEEECCC---CCEeEEe--eCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 333445677888887764 6677778888888642 2222221 12222234456666665 555778889999996
Q ss_pred cCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 328 RKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 328 ~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
+++.+..+......+.++...++|++.+ ++.+|.+++-...
T Consensus 283 -~g~~~~~~~~~~~~~~~~~~d~~g~l~~-gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 283 -DGTEKWNFETGSWIIATPVIDENGTIYF-GTRNGKFYALFNL 323 (330)
T ss_dssp -TSCEEEEEECSSCCCSCCEECTTCCEEE-ECTTSCEEEEEC-
T ss_pred -CCcEEEEEEcCCccccceEEcCCCEEEE-EcCCCeEEEEecc
Confidence 6777766655556677777778887554 7889999987664
No 232
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.20 E-value=6e-05 Score=67.05 Aligned_cols=140 Identities=12% Similarity=0.020 Sum_probs=87.4
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeee--cCCCC
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN--LERPG 300 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~--~~~~~ 300 (374)
.+++...++.|..||.... . ...+. ....+.++.+++++..+++ +. +.|.+||.+... ........ .....
T Consensus 63 l~~~d~~~~~i~~~d~~~~-~-~~~~~-~~~~v~~i~~~~dg~l~v~-~~-~gl~~~d~~~g~--~~~~~~~~~~~~~~~ 135 (326)
T 2ghs_A 63 AWWFNILERELHELHLASG-R-KTVHA-LPFMGSALAKISDSKQLIA-SD-DGLFLRDTATGV--LTLHAELESDLPGNR 135 (326)
T ss_dssp EEEEEGGGTEEEEEETTTT-E-EEEEE-CSSCEEEEEEEETTEEEEE-ET-TEEEEEETTTCC--EEEEECSSTTCTTEE
T ss_pred EEEEECCCCEEEEEECCCC-c-EEEEE-CCCcceEEEEeCCCeEEEE-EC-CCEEEEECCCCc--EEEEeeCCCCCCCCC
Confidence 4566777889999998643 2 22232 3467899999988865554 44 458889875432 22111111 11134
Q ss_pred eEEEEECCCCCEEEEEeCC----CeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEE-EEEeCCCcEEEecCC
Q 017296 301 ISGTSIRPDSKIAATAGWD----RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASASEDSTVALWELY 370 (374)
Q Consensus 301 v~~~~~sp~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-as~s~D~~v~~W~~~ 370 (374)
+..++++|+|++.++...+ +...||.+.+++. ..+..+....+.++|+|||+.| ++.+.++.|.+|++.
T Consensus 136 ~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 136 SNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred CCCEEECCCCCEEEEeCCCcCCCCceEEEEEeCCcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 7889999999987755422 2334444434543 3333344567899999999865 455667899999875
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.20 E-value=0.0018 Score=59.40 Aligned_cols=128 Identities=20% Similarity=0.243 Sum_probs=81.9
Q ss_pred cCCcEEEEeccCCCCceeeeecC--ccCeEEEEE--ecCCCceEEEe------cCCeEEEEEcCCCCCeEEEEEeeecC-
Q 017296 229 EDGSILVWDIRNPGIPLTAMKVH--LEPVLCLSI--DESCNGGISGG------ADQKIVLYNLDHSTGSCVIKKEINLE- 297 (374)
Q Consensus 229 ~dg~i~iwdl~~~~~~~~~~~~h--~~~v~~~~~--~~~~~~~~s~s------~D~~i~lwd~~~~~~~~~~~~~~~~~- 297 (374)
.+..|.+||+.+ .....++..- ......+.| +|++..++.++ .+++|.+|..+. +.......+...
T Consensus 226 ~~d~V~v~D~~~-~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~--g~~~~~~vIdi~~ 302 (462)
T 2ece_A 226 YGNRIHFWDLRK-RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED--GKWNAEKVIEIPA 302 (462)
T ss_dssp SCCEEEEEETTT-TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET--TEEEEEEEEEECC
T ss_pred cCCEEEEEECCC-CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC--CceeEEEEEeCCC
Confidence 378999999975 3444444432 123445555 88888776555 567898887764 333222211000
Q ss_pred -----------------CCCeEEEEECCCCCEEEEEeC-CCeEEEEEccC---CeEEEEeccc-----------C---Cc
Q 017296 298 -----------------RPGISGTSIRPDSKIAATAGW-DRRVRIYNYRK---GSALAILKYH-----------H---AT 342 (374)
Q Consensus 298 -----------------~~~v~~~~~sp~~~~l~s~~~-dg~v~iwd~~~---~~~~~~~~~h-----------~---~~ 342 (374)
......+.+|||+++|..+.+ .+.|.+||+.+ .+.+..+... . ..
T Consensus 303 ~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 303 EPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp EECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred ccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCC
Confidence 134678999999999887776 68999999863 3444444322 0 13
Q ss_pred eEEEEEeCCCCEEEEEe
Q 017296 343 CNAVSFSSDCKLMASAS 359 (374)
Q Consensus 343 v~~v~~sp~~~~las~s 359 (374)
...++++|||++|..+.
T Consensus 383 Pr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSSEEEEEC
T ss_pred CCEEEEcCCCCEEEEEc
Confidence 57789999999887766
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.14 E-value=0.0013 Score=56.17 Aligned_cols=185 Identities=9% Similarity=0.009 Sum_probs=111.8
Q ss_pred ceEEEccc-CCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccC
Q 017296 162 KYMAVAGE-QLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRN 240 (374)
Q Consensus 162 ~~~~~~~~-~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~ 240 (374)
.++..+|. .++.|++.|+++++.+..+.-.. ..+ ..-++ + . +....++.-.++.|.++|..+
T Consensus 33 ~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~----~~f-----geGi~---~--~---g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 33 TLFESTGLYGRSSVRQVALQTGKVENIHKMDD----SYF-----GEGLT---L--L---NEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp EEEEEECSTTTCEEEEEETTTCCEEEEEECCT----TCC-----EEEEE---E--E---TTEEEEEETTCSEEEEEETTT
T ss_pred eEEEECCCCCCCEEEEEECCCCCEEEEEecCC----Ccc-----eEEEE---E--e---CCEEEEEEecCCEEEEEECCC
Confidence 33444442 35799999999999877764210 000 00111 1 1 222344556789999999875
Q ss_pred CCCceeeeecC-ccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeec---CCCCeEEEEECCCCCEEEEE
Q 017296 241 PGIPLTAMKVH-LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL---ERPGISGTSIRPDSKIAATA 316 (374)
Q Consensus 241 ~~~~~~~~~~h-~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~s~ 316 (374)
. ..+.++..- ... ..++. ++..++.+..++++.+.|.+........ .... .......+.|. ++++.+..
T Consensus 96 ~-~v~~~i~~g~~~g-~glt~--Dg~~l~vs~gs~~l~viD~~t~~v~~~I--~Vg~~~~p~~~~nele~~-dg~lyvn~ 168 (266)
T 2iwa_A 96 L-SNIKNFTHQMKDG-WGLAT--DGKILYGSDGTSILYEIDPHTFKLIKKH--NVKYNGHRVIRLNELEYI-NGEVWANI 168 (266)
T ss_dssp T-EEEEEEECCSSSC-CEEEE--CSSSEEEECSSSEEEEECTTTCCEEEEE--ECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred C-cEEEEEECCCCCe-EEEEE--CCCEEEEECCCCeEEEEECCCCcEEEEE--EECCCCcccccceeEEEE-CCEEEEec
Confidence 3 334445322 222 22444 4555666667889999987653321111 1111 11235677777 67665655
Q ss_pred eCCCeEEEEEccCCeEEEEecccC-------------CceEEEEEeCCCC-EEEEEeCCCcEEEecCC
Q 017296 317 GWDRRVRIYNYRKGSALAILKYHH-------------ATCNAVSFSSDCK-LMASASEDSTVALWELY 370 (374)
Q Consensus 317 ~~dg~v~iwd~~~~~~~~~~~~h~-------------~~v~~v~~sp~~~-~las~s~D~~v~~W~~~ 370 (374)
..++.|.+-|..+++.+..+.-.. ...+.|+|+|+++ +++++.....|..-++.
T Consensus 169 ~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 169 WQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 567899999999999888775321 3568999999987 66777777777776653
No 235
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.08 E-value=0.0024 Score=62.63 Aligned_cols=54 Identities=11% Similarity=0.066 Sum_probs=41.3
Q ss_pred CCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 318 WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 318 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
.+|.|..||+.+++.+...+.+. ......+...+.+|+.++.|+.++.||...+
T Consensus 436 ~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG 489 (668)
T 1kv9_A 436 VSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKG 489 (668)
T ss_dssp CEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcC
Confidence 34889999999999887776433 3334455567788889999999999998654
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.07 E-value=0.00099 Score=61.05 Aligned_cols=198 Identities=14% Similarity=0.148 Sum_probs=112.6
Q ss_pred CCCceEEEcccCCCeEEEEecCCC----ceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecC----
Q 017296 159 EGPKYMAVAGEQLSEVEIWDLNTA----ERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYED---- 230 (374)
Q Consensus 159 ~~~~~~~~~~~~d~~i~vWd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~d---- 230 (374)
.+.+++.+.+..+++|.+.|+.+. +....+.........+.+ +... ..+.+ .+ .+++...+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s---~Ph~---~~~~p---dG--i~Vs~~g~~~g~ 161 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS---RLHT---VHCGP---DA--IYISALGNEEGE 161 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE---EEEE---EEECS---SC--EEEEEEEETTSC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCC---cccc---eeECC---Ce--EEEEcCCCcCCC
Confidence 345788888888899999999765 333333100000000000 0000 01222 22 34454444
Q ss_pred --CcEEEEeccCCCCceeeeec--CccC-eEEEEEecCCCceEEEe-------------------cCCeEEEEEcCCCCC
Q 017296 231 --GSILVWDIRNPGIPLTAMKV--HLEP-VLCLSIDESCNGGISGG-------------------ADQKIVLYNLDHSTG 286 (374)
Q Consensus 231 --g~i~iwdl~~~~~~~~~~~~--h~~~-v~~~~~~~~~~~~~s~s-------------------~D~~i~lwd~~~~~~ 286 (374)
|.|.++|.++. ..+..... .... -..+-++|+++.+++.. .+++|.+||++..
T Consensus 162 ~~g~v~vlD~~T~-~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-- 238 (462)
T 2ece_A 162 GPGGILMLDHYSF-EPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-- 238 (462)
T ss_dssp SCCEEEEECTTTC-CEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT--
T ss_pred CCCeEEEEECCCC-eEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCC--
Confidence 78999998753 33443331 1111 22356688888767663 3789999999753
Q ss_pred eEEEEEeeecC--CCCeEEEEE--CCCCCEEEEEe------CCCeEEEEEccCCeE--EEEe--ccc-------------
Q 017296 287 SCVIKKEINLE--RPGISGTSI--RPDSKIAATAG------WDRRVRIYNYRKGSA--LAIL--KYH------------- 339 (374)
Q Consensus 287 ~~~~~~~~~~~--~~~v~~~~~--sp~~~~l~s~~------~dg~v~iwd~~~~~~--~~~~--~~h------------- 339 (374)
+.. ..+... ......+.| +|+++++..++ .+++|.+|..+.++. .+++ ...
T Consensus 239 k~~--~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f 316 (462)
T 2ece_A 239 KRI--HSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPF 316 (462)
T ss_dssp EEE--EEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGG
T ss_pred cEe--eEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccccccccccccc
Confidence 222 233321 123445555 99999987666 567898887765431 1111 110
Q ss_pred ---CCceEEEEEeCCCCEE-EEEeCCCcEEEecCCCC
Q 017296 340 ---HATCNAVSFSSDCKLM-ASASEDSTVALWELYPP 372 (374)
Q Consensus 340 ---~~~v~~v~~sp~~~~l-as~s~D~~v~~W~~~~~ 372 (374)
...+..+.+||||++| ++.-..+.|.++++.++
T Consensus 317 ~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 317 KAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp TEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred ccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 2346788999999966 45556789999998644
No 237
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.05 E-value=0.001 Score=65.14 Aligned_cols=57 Identities=12% Similarity=0.102 Sum_probs=38.2
Q ss_pred EEEECCCCCEEEEEeCC-----------CeEEEEEccCCeEEEEec---ccCCceEEEEEeCCCCEEEEEeC
Q 017296 303 GTSIRPDSKIAATAGWD-----------RRVRIYNYRKGSALAILK---YHHATCNAVSFSSDCKLMASASE 360 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~d-----------g~v~iwd~~~~~~~~~~~---~h~~~v~~v~~sp~~~~las~s~ 360 (374)
+.++.|++++++.||.+ ..+.+||..+.+-. .+. .....-.+..+.|||+.++.||.
T Consensus 460 ~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~-~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 460 TSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFY-KQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEE-ECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred CeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCcee-ecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 45677899999999865 56899999776522 222 11122233456799999999884
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.00 E-value=0.002 Score=54.57 Aligned_cols=164 Identities=14% Similarity=0.146 Sum_probs=97.1
Q ss_pred CeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecC
Q 017296 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH 251 (374)
Q Consensus 172 ~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h 251 (374)
+.|++.|+++++.+..+.-.. ......+. +. +....++.-.++.+.+||.++. ..+.++...
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~-----------~~FgeGit-~~-----g~~ly~ltw~~~~v~v~D~~t~-~~~~ti~~~ 126 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGK-----------RYFGEGIS-DW-----KDKIVGLTWKNGLGFVWNIRNL-RQVRSFNYD 126 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCT-----------TCCEEEEE-EE-----TTEEEEEESSSSEEEEEETTTC-CEEEEEECS
T ss_pred ceEEEEECCCCcEEEEEecCC-----------ccceeEEE-Ee-----CCEEEEEEeeCCEEEEEECccC-cEEEEEECC
Confidence 489999999999877764210 11111111 11 1123444556899999999763 445555543
Q ss_pred ccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeec---CCCCeEEEEECCCCCEEEEEeCCCeEEEEEcc
Q 017296 252 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL---ERPGISGTSIRPDSKIAATAGWDRRVRIYNYR 328 (374)
Q Consensus 252 ~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~ 328 (374)
.+. ..++.+ +..++.+..++.|.++|.++.. ..-.-.... .-..++.+.+. +|++.+..-.+..|.+.|.+
T Consensus 127 ~eG-~glt~d--g~~L~~SdGs~~i~~iDp~T~~--v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~ 200 (262)
T 3nol_A 127 GEG-WGLTHN--DQYLIMSDGTPVLRFLDPESLT--PVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPE 200 (262)
T ss_dssp SCC-CCEEEC--SSCEEECCSSSEEEEECTTTCS--EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTT
T ss_pred CCc-eEEecC--CCEEEEECCCCeEEEEcCCCCe--EEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECC
Confidence 322 233343 4556666557788888876433 221111111 11234556666 67666555458899999999
Q ss_pred CCeEEEEeccc------------CCceEEEEEeCCCCEEEEEe
Q 017296 329 KGSALAILKYH------------HATCNAVSFSSDCKLMASAS 359 (374)
Q Consensus 329 ~~~~~~~~~~h------------~~~v~~v~~sp~~~~las~s 359 (374)
+++.+..+... ....+.|||+|+++.|..++
T Consensus 201 tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 201 TGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp TCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 99988776532 13568899999887665554
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.96 E-value=0.00032 Score=66.52 Aligned_cols=69 Identities=20% Similarity=0.221 Sum_probs=52.1
Q ss_pred eEEEEECCCCCEEEEEe-CCCeEEEEEccCCe------------EEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEe
Q 017296 301 ISGTSIRPDSKIAATAG-WDRRVRIYNYRKGS------------ALAILKYHHATCNAVSFSSDCKLMASASEDSTVALW 367 (374)
Q Consensus 301 v~~~~~sp~~~~l~s~~-~dg~v~iwd~~~~~------------~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W 367 (374)
.-++.|+|||++++.++ .+.+|.++|+.+.+ ....+. -......++|+|||....+.-.|+.|..|
T Consensus 279 PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kw 357 (595)
T 1fwx_A 279 PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKW 357 (595)
T ss_dssp CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEE
T ss_pred ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEE
Confidence 34689999999876555 68999999998643 223332 22468899999999666677899999999
Q ss_pred cCC
Q 017296 368 ELY 370 (374)
Q Consensus 368 ~~~ 370 (374)
|+.
T Consensus 358 di~ 360 (595)
T 1fwx_A 358 NIE 360 (595)
T ss_dssp EHH
T ss_pred Ehh
Confidence 974
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.95 E-value=0.0021 Score=56.46 Aligned_cols=134 Identities=14% Similarity=0.060 Sum_probs=83.9
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
.+..++.++.|..||.. +..+.........+.++.+++++. ++.++ +.+..+| . ++...... ......+.
T Consensus 149 ~l~vgt~~~~l~~~d~~--g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t--~~l~~~d-~--~g~~~~~~--~~~~~~~~ 218 (330)
T 3hxj_A 149 TIYVGSNDNYLYAINPD--GTEKWRFKTNDAITSAASIGKDGT-IYFGS--DKVYAIN-P--DGTEKWNF--YAGYWTVT 218 (330)
T ss_dssp CEEEECTTSEEEEECTT--SCEEEEEECSSCCCSCCEECTTCC-EEEES--SSEEEEC-T--TSCEEEEE--CCSSCCCS
T ss_pred EEEEEcCCCEEEEECCC--CCEeEEEecCCCceeeeEEcCCCE-EEEEe--CEEEEEC-C--CCcEEEEE--ccCCccee
Confidence 37778888999999986 333334444455666777777665 44555 7888887 3 22322222 22234477
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 303 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
++.+.+++.+.+ ++.++.+..+|. +++.+..+......+.++.+.++|. |..++.++.|..++.
T Consensus 219 ~~~~~~~g~l~v-~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~ 282 (330)
T 3hxj_A 219 RPAISEDGTIYV-TSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP 282 (330)
T ss_dssp CCEECTTSCEEE-EETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT
T ss_pred ceEECCCCeEEE-EcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC
Confidence 788888886555 667888888874 5666666654444445556655665 445666777777764
No 241
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.95 E-value=0.013 Score=56.16 Aligned_cols=53 Identities=11% Similarity=-0.004 Sum_probs=37.7
Q ss_pred CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 319 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 319 dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
+|.+..||..+++.+..+... ..+.+..+...+.+++.++.|+.|+.||...+
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence 578999999999988776532 23333333345566777899999999997654
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.93 E-value=0.00028 Score=63.17 Aligned_cols=117 Identities=10% Similarity=0.085 Sum_probs=77.4
Q ss_pred cCccCeEEEEEecCCCceEEEec-----CCeEEEEEcCCCCCeEEEEEeee----cCCCCeEEEEECCCCCE-EEEEe--
Q 017296 250 VHLEPVLCLSIDESCNGGISGGA-----DQKIVLYNLDHSTGSCVIKKEIN----LERPGISGTSIRPDSKI-AATAG-- 317 (374)
Q Consensus 250 ~h~~~v~~~~~~~~~~~~~s~s~-----D~~i~lwd~~~~~~~~~~~~~~~----~~~~~v~~~~~sp~~~~-l~s~~-- 317 (374)
.|...+..+.+++++..+++... ++.|..||++.. +......+. .+......++|+|++.. .++..
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg--~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNN--QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTT--EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCC--eEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc
Confidence 35568999999998764444433 678999998643 322111211 11234678999986544 45554
Q ss_pred -CCCeEEEEEccCCeEEEEecccC-----------------------------CceEEEEEeCCCCEEEEEeCCCcEEEe
Q 017296 318 -WDRRVRIYNYRKGSALAILKYHH-----------------------------ATCNAVSFSSDCKLMASASEDSTVALW 367 (374)
Q Consensus 318 -~dg~v~iwd~~~~~~~~~~~~h~-----------------------------~~v~~v~~sp~~~~las~s~D~~v~~W 367 (374)
.++.|.+||+.+++....+.+|. ..++.++|+|||+.|..+..++. ++|
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~ 220 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMY 220 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEE
T ss_pred CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEE
Confidence 68899999998887666554431 13688999999998887776664 555
Q ss_pred cC
Q 017296 368 EL 369 (374)
Q Consensus 368 ~~ 369 (374)
.+
T Consensus 221 ~~ 222 (343)
T 2qe8_A 221 RI 222 (343)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.86 E-value=0.0015 Score=55.52 Aligned_cols=171 Identities=11% Similarity=0.044 Sum_probs=101.2
Q ss_pred eEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCC
Q 017296 163 YMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPG 242 (374)
Q Consensus 163 ~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~ 242 (374)
.+..+.+.++.|++.|+++++.+..+ -.. ......+ .+ . +....++.-.++.+.+||.++ .
T Consensus 66 ~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-----------~~FgeGi-t~--~---g~~Ly~ltw~~~~v~V~D~~T-l 126 (268)
T 3nok_A 66 HFFESTGHQGTLRQLSLESAQPVWME-RLG-----------NIFAEGL-AS--D---GERLYQLTWTEGLLFTWSGMP-P 126 (268)
T ss_dssp EEEEEETTTTEEEECCSSCSSCSEEE-ECT-----------TCCEEEE-EE--C---SSCEEEEESSSCEEEEEETTT-T
T ss_pred EEEEEcCCCCEEEEEECCCCcEEeEE-CCC-----------CcceeEE-EE--e---CCEEEEEEccCCEEEEEECCc-C
Confidence 34555566778999999999876665 210 0000011 11 1 112344466789999999875 3
Q ss_pred CceeeeecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecC---CCCeEEEEECCCCCEEEEEeCC
Q 017296 243 IPLTAMKVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE---RPGISGTSIRPDSKIAATAGWD 319 (374)
Q Consensus 243 ~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~s~~~d 319 (374)
..+.++....+. ..++.+ +..++.+..++.|.++|.++.. ..-.-..... -..+..+.+. +|++.+..-.+
T Consensus 127 ~~~~ti~~~~eG-wGLt~D--g~~L~vSdGs~~l~~iDp~T~~--v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s 200 (268)
T 3nok_A 127 QRERTTRYSGEG-WGLCYW--NGKLVRSDGGTMLTFHEPDGFA--LVGAVQVKLRGQPVELINELECA-NGVIYANIWHS 200 (268)
T ss_dssp EEEEEEECSSCC-CCEEEE--TTEEEEECSSSEEEEECTTTCC--EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTC
T ss_pred cEEEEEeCCCce-eEEecC--CCEEEEECCCCEEEEEcCCCCe--EEEEEEeCCCCcccccccccEEe-CCEEEEEECCC
Confidence 445555543222 344444 3456666668889998876433 2211111111 1234556666 67665554457
Q ss_pred CeEEEEEccCCeEEEEeccc-------------CCceEEEEEeCCCC-EEEEE
Q 017296 320 RRVRIYNYRKGSALAILKYH-------------HATCNAVSFSSDCK-LMASA 358 (374)
Q Consensus 320 g~v~iwd~~~~~~~~~~~~h-------------~~~v~~v~~sp~~~-~las~ 358 (374)
..|.+-|.++++.+..+.-. ....+.||+.|+++ +++||
T Consensus 201 ~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 201 SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 89999999999988776532 13568899999876 55554
No 244
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.86 E-value=0.019 Score=55.01 Aligned_cols=80 Identities=14% Similarity=0.132 Sum_probs=47.6
Q ss_pred cCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCc-eEEEEEeC
Q 017296 272 ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT-CNAVSFSS 350 (374)
Q Consensus 272 ~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~-v~~v~~sp 350 (374)
.++.+..||+... +......... .+.+..+...+..+..++.|+.++.||.++++.+..++..... ..-+.+..
T Consensus 442 ~~g~l~a~D~~tG--~~~W~~~~~~---~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~ 516 (571)
T 2ad6_A 442 EMGQIRAFDLTTG--KAKWTKWEKF---AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSF 516 (571)
T ss_dssp CCEEEEEECTTTC--CEEEEEEESS---CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred CCCeEEEEECCCC--CEEEEecCCC---CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEE
Confidence 3578888887643 3333222211 1222222223456677899999999999999999887643321 12244667
Q ss_pred CCCEEE
Q 017296 351 DCKLMA 356 (374)
Q Consensus 351 ~~~~la 356 (374)
+|+.++
T Consensus 517 ~G~~yv 522 (571)
T 2ad6_A 517 KGKQYI 522 (571)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 888444
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.82 E-value=0.0082 Score=58.79 Aligned_cols=82 Identities=11% Similarity=0.151 Sum_probs=51.9
Q ss_pred CCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCce-EEEEEeCC
Q 017296 273 DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC-NAVSFSSD 351 (374)
Q Consensus 273 D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v-~~v~~sp~ 351 (374)
+|.|.-||+.+ ++...+..... ......+...+.+++.++.|+.++.||.++++.+..++...... .-+.+..+
T Consensus 437 ~g~l~A~D~~t--G~~~W~~~~~~---~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~ 511 (668)
T 1kv9_A 437 SGALLAWDPVK--QKAAWKVPYPT---HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELA 511 (668)
T ss_dssp EEEEEEEETTT--TEEEEEEEESS---SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred cceEEEEeCCC--CcEEEEccCCC---CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEEC
Confidence 48899999864 44443332211 12223344456788889999999999999999998876543211 22445568
Q ss_pred CC-EEEEEe
Q 017296 352 CK-LMASAS 359 (374)
Q Consensus 352 ~~-~las~s 359 (374)
|+ +++.++
T Consensus 512 G~~yva~~~ 520 (668)
T 1kv9_A 512 GRQYVAIMA 520 (668)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 87 555543
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.80 E-value=0.0073 Score=51.58 Aligned_cols=103 Identities=8% Similarity=-0.130 Sum_probs=60.9
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeec--Ccc---CeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeec--
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKV--HLE---PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL-- 296 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~--h~~---~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~-- 296 (374)
++++..++.|.++|.++.. ....+.. ... .++.+.+. ++..++....++.|.+-|.+... ..-.-....
T Consensus 119 l~vs~gs~~l~viD~~t~~-v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~--V~~~I~~~g~~ 194 (266)
T 2iwa_A 119 LYGSDGTSILYEIDPHTFK-LIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGT--LLGWILLPNLR 194 (266)
T ss_dssp EEEECSSSEEEEECTTTCC-EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCC--EEEEEECHHHH
T ss_pred EEEECCCCeEEEEECCCCc-EEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCc--EEEEEECCCcc
Confidence 4444467899999987533 2333322 112 35566666 44434455567899999886543 222111110
Q ss_pred ---------CCCCeEEEEECCCCCE-EEEEeCCCeEEEEEccCC
Q 017296 297 ---------ERPGISGTSIRPDSKI-AATAGWDRRVRIYNYRKG 330 (374)
Q Consensus 297 ---------~~~~v~~~~~sp~~~~-l~s~~~dg~v~iwd~~~~ 330 (374)
.......++|+|+++. ++++....++..-++...
T Consensus 195 ~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 195 KKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp HHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred cccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 1134679999999765 556667788988887653
No 247
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.78 E-value=0.018 Score=55.27 Aligned_cols=81 Identities=9% Similarity=0.128 Sum_probs=50.0
Q ss_pred CCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCce-EEEEEeCC
Q 017296 273 DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHATC-NAVSFSSD 351 (374)
Q Consensus 273 D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v-~~v~~sp~ 351 (374)
+|.+.-||+.+. +...+...... ...-.+...+.++..++.|+.++.||.++|+.+..++...... .-+.|..+
T Consensus 465 ~G~l~A~D~~tG--~~~W~~~~~~~---~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 465 VGSLRAMDPVSG--KVVWEHKEHLP---LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp SEEEEEECTTTC--CEEEEEEESSC---CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred cceEEEEECCCC--CEEEEecCCCC---CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEEC
Confidence 678888888644 33333222111 1111111235577779999999999999999998887543222 22567789
Q ss_pred CC-EEEEE
Q 017296 352 CK-LMASA 358 (374)
Q Consensus 352 ~~-~las~ 358 (374)
|+ +++..
T Consensus 540 G~qYv~~~ 547 (582)
T 1flg_A 540 GEQYLGVT 547 (582)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEE
Confidence 98 55544
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.72 E-value=0.0021 Score=61.02 Aligned_cols=131 Identities=11% Similarity=0.052 Sum_probs=83.2
Q ss_pred CcEEEEeccC--CCCceeeeecCccCeEEEEEecCCCceEE-EecCCeEEEEEcCCCC----Ce----EEEEEeeecCCC
Q 017296 231 GSILVWDIRN--PGIPLTAMKVHLEPVLCLSIDESCNGGIS-GGADQKIVLYNLDHST----GS----CVIKKEINLERP 299 (374)
Q Consensus 231 g~i~iwdl~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~s-~s~D~~i~lwd~~~~~----~~----~~~~~~~~~~~~ 299 (374)
+.|.+.|.++ .......+.. .....++.++|++..++. +..+++|.++|++... ++ .....+.. -..
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~ 331 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGL 331 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCS
T ss_pred CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCC
Confidence 5699999875 2221223322 235567889999987655 4568899999997321 00 00111221 124
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEEccC----------CeEEEEecccCCce-----EEEEEeCCCCEEEEE---eCC
Q 017296 300 GISGTSIRPDSKIAATAGWDRRVRIYNYRK----------GSALAILKYHHATC-----NAVSFSSDCKLMASA---SED 361 (374)
Q Consensus 300 ~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~----------~~~~~~~~~h~~~v-----~~v~~sp~~~~las~---s~D 361 (374)
+-+.++|+|+|...++.-.|+.|.+||+.+ .+.+.++.-|..+- ..+.++|||++|+++ |.|
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skd 411 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKD 411 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTT
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCcc
Confidence 678899999995455667799999999977 45667776665432 123468999998876 445
Q ss_pred Cc
Q 017296 362 ST 363 (374)
Q Consensus 362 ~~ 363 (374)
..
T Consensus 412 r~ 413 (595)
T 1fwx_A 412 RF 413 (595)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 249
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.56 E-value=0.065 Score=51.54 Aligned_cols=82 Identities=12% Similarity=0.114 Sum_probs=49.1
Q ss_pred cCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccCCc-eEEEEEeC
Q 017296 272 ADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHHAT-CNAVSFSS 350 (374)
Q Consensus 272 ~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~-v~~v~~sp 350 (374)
.+|.+.-||+.+. +.......... ..+-.+...+.++..++.|+.++.||.++|+.+..++-.... ..-+.+..
T Consensus 451 ~~G~l~A~D~~tG--~~~W~~~~~~~---~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~y~~ 525 (599)
T 1w6s_A 451 GLGQIKAYNAITG--DYKWEKMERFA---VWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGYPMTYTH 525 (599)
T ss_dssp CCEEEEEECTTTC--CEEEEEEESSC---CCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred CcCeEEEEECCCC--CEEeEecCCCC---ccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEeccEEEEe
Confidence 3578888888644 33333222111 111112224556777999999999999999999877644321 12255667
Q ss_pred CCC-EEEEE
Q 017296 351 DCK-LMASA 358 (374)
Q Consensus 351 ~~~-~las~ 358 (374)
+|+ ++++.
T Consensus 526 ~G~qyv~~~ 534 (599)
T 1w6s_A 526 KGTQYVAIY 534 (599)
T ss_dssp TTEEEEEEE
T ss_pred CCEEEEEEE
Confidence 888 55544
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.54 E-value=0.029 Score=47.02 Aligned_cols=164 Identities=12% Similarity=0.074 Sum_probs=95.8
Q ss_pred CeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCCceeeeecC
Q 017296 172 SEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGIPLTAMKVH 251 (374)
Q Consensus 172 ~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~~~~~~~~h 251 (374)
+.|+..|+++++.+..+.-.. ...-..+. +. +....+..-.++.+.+||.++ ...+.++...
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~-----------~~fgeGi~-~~-----~~~ly~ltw~~~~v~v~D~~t-l~~~~ti~~~ 104 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPP-----------PYFGAGIV-AW-----RDRLIQLTWRNHEGFVYDLAT-LTPRARFRYP 104 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCT-----------TCCEEEEE-EE-----TTEEEEEESSSSEEEEEETTT-TEEEEEEECS
T ss_pred ceEEEEECCCCCEEEEEeCCC-----------CcceeEEE-Ee-----CCEEEEEEeeCCEEEEEECCc-CcEEEEEeCC
Confidence 589999999999877764221 00001111 11 112344456789999999875 3345555443
Q ss_pred ccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecC---CCCeEEEEECCCCCEEEEEeCCCeEEEEEcc
Q 017296 252 LEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLE---RPGISGTSIRPDSKIAATAGWDRRVRIYNYR 328 (374)
Q Consensus 252 ~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~ 328 (374)
... ..++. ++..++.+..++.|.++|.++.. ..-.-....+ -..+..+.+. ++++.+.--.+..|.+.|.+
T Consensus 105 ~~G-wglt~--dg~~L~vSdgs~~l~~iDp~t~~--~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~ 178 (243)
T 3mbr_X 105 GEG-WALTS--DDSHLYMSDGTAVIRKLDPDTLQ--QVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPA 178 (243)
T ss_dssp SCC-CEEEE--CSSCEEEECSSSEEEEECTTTCC--EEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTT
T ss_pred CCc-eEEee--CCCEEEEECCCCeEEEEeCCCCe--EEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECC
Confidence 322 33443 34556666668889998876433 2211111111 1234455554 66655544457899999999
Q ss_pred CCeEEEEeccc------------C-CceEEEEEeCCCCEEEEEe
Q 017296 329 KGSALAILKYH------------H-ATCNAVSFSSDCKLMASAS 359 (374)
Q Consensus 329 ~~~~~~~~~~h------------~-~~v~~v~~sp~~~~las~s 359 (374)
+++.+..+.-. . ...+.||+.|+++.|...+
T Consensus 179 tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 179 SGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 99988776522 1 3568899999877554444
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.43 E-value=0.094 Score=50.42 Aligned_cols=55 Identities=9% Similarity=-0.055 Sum_probs=37.1
Q ss_pred CCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCCC
Q 017296 318 WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPPH 373 (374)
Q Consensus 318 ~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~~ 373 (374)
.+|.+.-||+.+++.+...+. ...+..-.+...+.+++.++.|+.++.+|...+.
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred CcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCC
Confidence 357899999999998776642 2222221223356677778999999999886653
No 252
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.42 E-value=0.096 Score=50.25 Aligned_cols=54 Identities=13% Similarity=0.063 Sum_probs=38.0
Q ss_pred CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCCC
Q 017296 319 DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYPPH 373 (374)
Q Consensus 319 dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~~ 373 (374)
+|.+..||+.+++.+.....+. .+..-.....+.+++.++.|+.++.||...+.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCC
Confidence 6889999999999887665332 22222222346678889999999999986653
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.31 E-value=0.071 Score=46.37 Aligned_cols=96 Identities=13% Similarity=0.050 Sum_probs=57.6
Q ss_pred ecCCCce-EEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEE--Eec
Q 017296 261 DESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALA--ILK 337 (374)
Q Consensus 261 ~~~~~~~-~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~--~~~ 337 (374)
++++..+ ++-...+.|..++++.. +.......+. .......++++++|++.++....+.|.++|.. ++... .+.
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~-g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~ 251 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDST-DKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAE 251 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTT-SCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGG
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCC-CCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecc
Confidence 3444333 45556788999988641 1110000000 01234568999999987777778899999874 65532 233
Q ss_pred ccCCceEEEEEe---CCCCEEEEEe
Q 017296 338 YHHATCNAVSFS---SDCKLMASAS 359 (374)
Q Consensus 338 ~h~~~v~~v~~s---p~~~~las~s 359 (374)
.....+.+++|. ||++.|..++
T Consensus 252 ~~~~~p~~~a~~g~~~d~~~LyVt~ 276 (306)
T 2p4o_A 252 QGVIGSTAVAFGQTEGDCTAIYVVT 276 (306)
T ss_dssp GTCTTEEEEEECCSTTTTTEEEEEE
T ss_pred cccCCceEEEEecccCCCCEEEEEC
Confidence 333578999998 8877554433
No 254
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.22 E-value=0.079 Score=44.92 Aligned_cols=142 Identities=11% Similarity=0.076 Sum_probs=87.8
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCc-eEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCe
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 301 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v 301 (374)
.+++-..++.|..+|+... ...............+++++++.. +++....+.|.+++++........ .......
T Consensus 50 ly~~d~~~~~I~~~~~~g~-~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~----~~~~~~P 124 (267)
T 1npe_A 50 VYWTDISEPSIGRASLHGG-EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLF----DTGLVNP 124 (267)
T ss_dssp EEEEETTTTEEEEEESSSC-CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE----CSSCSSE
T ss_pred EEEEECCCCEEEEEecCCC-CcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEE----ECCCCCc
Confidence 3445566788999998642 222222222356788999986444 455566789999998754322211 1112356
Q ss_pred EEEEECCCCCEEEEEeC---CCeEEEEEccCCeEEEEec-ccCCceEEEEEeCCCCE-EEEEeCCCcEEEecCC
Q 017296 302 SGTSIRPDSKIAATAGW---DRRVRIYNYRKGSALAILK-YHHATCNAVSFSSDCKL-MASASEDSTVALWELY 370 (374)
Q Consensus 302 ~~~~~sp~~~~l~s~~~---dg~v~iwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~-las~s~D~~v~~W~~~ 370 (374)
..++++|++..|..+.. .+.|..++.. ++....+. ........++++|++.. .++-...+.|..++..
T Consensus 125 ~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d-g~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~ 197 (267)
T 1npe_A 125 RGIVTDPVRGNLYWTDWNRDNPKIETSHMD-GTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPA 197 (267)
T ss_dssp EEEEEETTTTEEEEEECCSSSCEEEEEETT-SCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cEEEEeeCCCEEEEEECCCCCcEEEEEecC-CCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecC
Confidence 78999997655544443 3688888875 33333332 23356789999998764 4555667788888764
No 255
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.03 E-value=0.037 Score=48.55 Aligned_cols=142 Identities=8% Similarity=0.058 Sum_probs=84.5
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeec--------------------CccCeEEEEEec-CCCceEEEecCCeEEEEEcC
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKV--------------------HLEPVLCLSIDE-SCNGGISGGADQKIVLYNLD 282 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~--------------------h~~~v~~~~~~~-~~~~~~s~s~D~~i~lwd~~ 282 (374)
++++..++.|..||..... +..+.. .......+++++ ++ .++.+...+.+..+|.+
T Consensus 33 l~v~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d~~~~i~~~d~~ 109 (322)
T 2fp8_A 33 FYTSVQDGRVIKYEGPNSG--FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVDCYYHLSVVGSE 109 (322)
T ss_dssp EEEECTTSEEEEECCTTTC--EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEETTTEEEEECTT
T ss_pred EEEEcCCCeEEEECCCCCc--eEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEECCCCEEEEeCC
Confidence 5667778888888875422 222210 113467899987 55 45656555668888764
Q ss_pred CCCCeEEEEEeee-cCCCCeEEEEECC-CCCEEEEEeC-----------------CCeEEEEEccCCeEEEEecccCCce
Q 017296 283 HSTGSCVIKKEIN-LERPGISGTSIRP-DSKIAATAGW-----------------DRRVRIYNYRKGSALAILKYHHATC 343 (374)
Q Consensus 283 ~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~s~~~-----------------dg~v~iwd~~~~~~~~~~~~h~~~v 343 (374)
..... .+..... ........+++.| +|++.++... ++.|..||..+++... +.......
T Consensus 110 ~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-~~~~~~~p 187 (322)
T 2fp8_A 110 GGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL-LLKELHVP 187 (322)
T ss_dssp CEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE-EEEEESCC
T ss_pred CCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE-eccCCccC
Confidence 32111 1111111 1112467899999 9987765432 3678888886665332 22222355
Q ss_pred EEEEEeCCCCEE-EEEeCCCcEEEecCC
Q 017296 344 NAVSFSSDCKLM-ASASEDSTVALWELY 370 (374)
Q Consensus 344 ~~v~~sp~~~~l-as~s~D~~v~~W~~~ 370 (374)
+.++|+|+|+.| ++-+.++.|..+++.
T Consensus 188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~ 215 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFLSHQIVKYWLE 215 (322)
T ss_dssp CEEEECTTSSEEEEEEGGGTEEEEEESS
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 678999999854 554667888888765
No 256
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.93 E-value=0.083 Score=48.60 Aligned_cols=141 Identities=7% Similarity=0.061 Sum_probs=85.3
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEec-CC----eEEEEEcCCCCC-eEEEEEeeec
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA-DQ----KIVLYNLDHSTG-SCVIKKEINL 296 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~-D~----~i~lwd~~~~~~-~~~~~~~~~~ 296 (374)
.|+.+...+.|+.+|+... .+..+.........+++++++..++.+.. .+ .+...+.+..-. ...+ ..
T Consensus 151 ~Lyv~d~~~~I~~id~~~~--~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l-~~--- 224 (430)
T 3tc9_A 151 HLYLVGEQHPTRLIDFEKE--YVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITEL-TK--- 224 (430)
T ss_dssp EEEEEEBTEEEEEEETTTT--EEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEE-EE---
T ss_pred eEEEEeCCCcEEEEECCCC--EEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeee-cc---
Confidence 3555444478888998642 23344344556888999998885554443 22 233333322111 0111 11
Q ss_pred CCCCeEEEEECC-CCCEEEEEeCCCeEEEEEccCCeEEEEecc-cCCceEEEEEeCCCC-EEEEEeCCCcEEEecCC
Q 017296 297 ERPGISGTSIRP-DSKIAATAGWDRRVRIYNYRKGSALAILKY-HHATCNAVSFSSDCK-LMASASEDSTVALWELY 370 (374)
Q Consensus 297 ~~~~v~~~~~sp-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~-~las~s~D~~v~~W~~~ 370 (374)
......++++| ++.++++-..++.|..++...+........ .......++|+|+|+ ++++-.....|..++..
T Consensus 225 -~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 225 -GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp -CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred -CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 12356788999 677667666789999999976654222221 224577899999999 55666677888887653
No 257
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.86 E-value=0.092 Score=46.80 Aligned_cols=141 Identities=13% Similarity=0.124 Sum_probs=81.5
Q ss_pred cCCcEEEEeccCCCCceeee--ecC-----ccCeEEEEEec--CCC--ceEEEec--CCeEEEEEcCCCCCeEEEEEeee
Q 017296 229 EDGSILVWDIRNPGIPLTAM--KVH-----LEPVLCLSIDE--SCN--GGISGGA--DQKIVLYNLDHSTGSCVIKKEIN 295 (374)
Q Consensus 229 ~dg~i~iwdl~~~~~~~~~~--~~h-----~~~v~~~~~~~--~~~--~~~s~s~--D~~i~lwd~~~~~~~~~~~~~~~ 295 (374)
.+|.|.++|+.++......+ .+. .-....+.+.+ ++. .++.... +.+|.+|+++.............
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 68999999987432222222 221 12344555533 332 2233333 67899999876655544444443
Q ss_pred cCC-CCeEEEEECCCCCEEEEEeC---C------------CeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEE-EEE
Q 017296 296 LER-PGISGTSIRPDSKIAATAGW---D------------RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASA 358 (374)
Q Consensus 296 ~~~-~~v~~~~~sp~~~~l~s~~~---d------------g~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-as~ 358 (374)
... .....+.+.++|++.++..- | ..=++|-+..++ +..+...-...+.++|+||++.| ++-
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~-~~~~~~~l~~pNGia~spDg~~lYvad 239 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND-VRVVAEGFDFANGINISPDGKYVYIAE 239 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-CEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCe-EEEeecCCcccCcceECCCCCEEEEEe
Confidence 322 35778999999988776541 1 223344343333 33333334567899999999855 444
Q ss_pred eCCCcEEEecCC
Q 017296 359 SEDSTVALWELY 370 (374)
Q Consensus 359 s~D~~v~~W~~~ 370 (374)
+..+.|..|++.
T Consensus 240 t~~~~I~~~~~~ 251 (355)
T 3sre_A 240 LLAHKIHVYEKH 251 (355)
T ss_dssp GGGTEEEEEEEC
T ss_pred CCCCeEEEEEEC
Confidence 667888888875
No 258
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.85 E-value=0.13 Score=43.66 Aligned_cols=138 Identities=6% Similarity=-0.121 Sum_probs=86.3
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccC-eEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCe
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEP-VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGI 301 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v 301 (374)
.+++.+.+|.|+.+|+++... +..+ -.... -..++++++. .....-.++.+.++|.++. +.. .++.....
T Consensus 67 Ly~stG~~g~v~~iD~~Tgkv-~~~~-l~~~~FgeGit~~g~~-Ly~ltw~~~~v~V~D~~Tl--~~~--~ti~~~~e-- 137 (268)
T 3nok_A 67 FFESTGHQGTLRQLSLESAQP-VWME-RLGNIFAEGLASDGER-LYQLTWTEGLLFTWSGMPP--QRE--RTTRYSGE-- 137 (268)
T ss_dssp EEEEETTTTEEEECCSSCSSC-SEEE-ECTTCCEEEEEECSSC-EEEEESSSCEEEEEETTTT--EEE--EEEECSSC--
T ss_pred EEEEcCCCCEEEEEECCCCcE-EeEE-CCCCcceeEEEEeCCE-EEEEEccCCEEEEEECCcC--cEE--EEEeCCCc--
Confidence 466777888999999987443 3333 21211 1235565543 2344557899999998643 222 23332222
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecc--cC---CceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 302 SGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY--HH---ATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 302 ~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~---~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
...+++|++.|+.+..+++|.++|..+.+.+..+.- +. ..++.+.|. +|++.|....+..|.+-|...
T Consensus 138 -GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 138 -GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp -CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTT
T ss_pred -eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCC
Confidence 123346777776666789999999999888776643 22 255778886 887777666677777766543
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.81 E-value=0.23 Score=43.40 Aligned_cols=111 Identities=11% Similarity=0.071 Sum_probs=72.6
Q ss_pred CeEEEEEecCCCceE-EEecCCeEEEEEcCCCC-CeEEEEEeeecCCCCeEEEEECCCCCEEEEEeC----------CCe
Q 017296 254 PVLCLSIDESCNGGI-SGGADQKIVLYNLDHST-GSCVIKKEINLERPGISGTSIRPDSKIAATAGW----------DRR 321 (374)
Q Consensus 254 ~v~~~~~~~~~~~~~-s~s~D~~i~lwd~~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~----------dg~ 321 (374)
....+++++++..++ +-...+.|..++++... +....... .. +...+++.++|++.++... .+.
T Consensus 186 ~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~--~~--gP~gi~~d~~G~l~va~~~~~~~~~~~~~~~~ 261 (322)
T 2fp8_A 186 VPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK--IP--NPGNIKRNADGHFWVSSSEELDGNMHGRVDPK 261 (322)
T ss_dssp CCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE--CS--SEEEEEECTTSCEEEEEEEETTSSTTSCEEEE
T ss_pred cCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe--CC--CCCCeEECCCCCEEEEecCcccccccCCCccE
Confidence 345688998887554 44667899999987421 11111111 11 2678999999987766544 467
Q ss_pred EEEEEccCCeEEEEeccc----CCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 322 VRIYNYRKGSALAILKYH----HATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 322 v~iwd~~~~~~~~~~~~h----~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
|..+|. +++.+..+... ...+..+++ .++++.++....+.|..+++.
T Consensus 262 v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 262 GIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred EEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 888886 47777666543 235667776 477777777778888888764
No 260
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.77 E-value=0.45 Score=46.25 Aligned_cols=71 Identities=8% Similarity=0.082 Sum_probs=41.8
Q ss_pred EEEEeCCCCEEEEecC-CCcEEEEeCcccceeeeeeeeeceeeeEEeccCCccccceeeecc-cc-----CeEEEEecCC
Q 017296 23 DVCFHQTKPILFAGTT-GGELRIWDTVQHRTVSSSWVHSAAHGIVSVATGPSIGLNKVISQG-RD-----GTVKCWDIEN 95 (374)
Q Consensus 23 ~l~~~~~~~~l~s~s~-D~~v~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~-~D-----~~vrvwd~~~ 95 (374)
++++..++.+++.|+. +..+.+||..+.+....-..+..-....++.. + +++.++.|| .+ ..+.+||+.+
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~-~--dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATM-S--DGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEEC-T--TSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEe-c--CCeEEEEeCcccCCcccccceEeCCCC
Confidence 4677788999999984 46899999877653221111111011111221 1 456777777 44 4688888876
Q ss_pred C
Q 017296 96 G 96 (374)
Q Consensus 96 ~ 96 (374)
+
T Consensus 324 ~ 324 (656)
T 1k3i_A 324 K 324 (656)
T ss_dssp T
T ss_pred C
Confidence 4
No 261
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.71 E-value=0.27 Score=42.93 Aligned_cols=143 Identities=8% Similarity=0.004 Sum_probs=84.6
Q ss_pred EEEEEecCCcEEEEeccCC---CCceeeeecCccCeEEEEEecCC-CceEEEecCCeEEEEEcCCCCCeEEEEEeeecCC
Q 017296 223 NVLAGYEDGSILVWDIRNP---GIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 298 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~---~~~~~~~~~h~~~v~~~~~~~~~-~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~ 298 (374)
.+++-..++.|..+|+... ......+.........+++++.. ..+++-...+.|.+.+++....... .....
T Consensus 44 ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~----~~~~~ 119 (316)
T 1ijq_A 44 IYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTL----FRENG 119 (316)
T ss_dssp EEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEE----EECTT
T ss_pred EEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEE----EECCC
Confidence 3455566788998988641 11122222223455788898644 3345556788999999875322211 11122
Q ss_pred CCeEEEEECCCCCEEEEEeCC--CeEEEEEccCCeEEEEe-cccCCceEEEEEeCCCCEE-EEEeCCCcEEEecCC
Q 017296 299 PGISGTSIRPDSKIAATAGWD--RRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLM-ASASEDSTVALWELY 370 (374)
Q Consensus 299 ~~v~~~~~sp~~~~l~s~~~d--g~v~iwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l-as~s~D~~v~~W~~~ 370 (374)
.....+++.|.+..|.-+... +.|...++. ++....+ ...-...+.+++.|++..| ++-+..+.|...++.
T Consensus 120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 457889999976665545443 688888874 4444333 2234567899999876654 444556678777763
No 262
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.62 E-value=0.11 Score=43.92 Aligned_cols=139 Identities=10% Similarity=0.012 Sum_probs=83.6
Q ss_pred EEEEEecCC--cEEEEeccCCCCceeeeecCccC-eEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCC
Q 017296 223 NVLAGYEDG--SILVWDIRNPGIPLTAMKVHLEP-VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 299 (374)
Q Consensus 223 ~~~~gs~dg--~i~iwdl~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 299 (374)
.+.+.+.+| .|+.+|+++. .....+...... -..++++.+. .....-.++.+.++|.++.. . ..++.....
T Consensus 55 LyestG~~g~S~v~~vD~~Tg-kv~~~~~l~~~~FgeGit~~g~~-ly~ltw~~~~v~v~D~~t~~--~--~~ti~~~~e 128 (262)
T 3nol_A 55 FYESTGLNGRSSIRKVDIESG-KTLQQIELGKRYFGEGISDWKDK-IVGLTWKNGLGFVWNIRNLR--Q--VRSFNYDGE 128 (262)
T ss_dssp EEEEEEETTEEEEEEECTTTC-CEEEEEECCTTCCEEEEEEETTE-EEEEESSSSEEEEEETTTCC--E--EEEEECSSC
T ss_pred EEEECCCCCCceEEEEECCCC-cEEEEEecCCccceeEEEEeCCE-EEEEEeeCCEEEEEECccCc--E--EEEEECCCC
Confidence 355555555 8999999864 334444332222 1235555442 23345568899999986543 2 223332221
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEeccc----C-CceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 300 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH----H-ATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 300 ~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h----~-~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
...+++|++.|+.+..+++|.++|..+.+.+..+.-. + ..++.+.|. +|+..|..-.+..|.+-|...
T Consensus 129 ---G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 129 ---GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp ---CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTT
T ss_pred ---ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCC
Confidence 2334466776665555788999999998887765432 2 456678886 787777666677777766543
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.48 E-value=0.8 Score=45.56 Aligned_cols=138 Identities=9% Similarity=0.105 Sum_probs=87.2
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeee---------cCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEe
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMK---------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKE 293 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~ 293 (374)
.+-.|+.++.|..||..... +..+. .....|.++..++++..+..|..++.+.++|.+... ......
T Consensus 369 ~lWiGt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~--~~~~~~ 444 (795)
T 4a2l_A 369 NLWIGTNDGGLNLYNPITQR--FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ--VENFNQ 444 (795)
T ss_dssp CEEEEESSSCEEEECTTTCC--EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC--EEEECT
T ss_pred CEEEEECCCCeEEEcCCCCc--EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc--EEEeec
Confidence 36778888889999976432 22221 123578899988877536778887889999875432 211110
Q ss_pred --eecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecc-------cCCceEEEEEeCCCCEEEEEeCCCcE
Q 017296 294 --INLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY-------HHATCNAVSFSSDCKLMASASEDSTV 364 (374)
Q Consensus 294 --~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~-------h~~~v~~v~~sp~~~~las~s~D~~v 364 (374)
.......|.++...+++++.+.+ . +-+.+||..+++.. .+.. +...|.++...++|++.+... +| +
T Consensus 445 ~~~~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G-l 519 (795)
T 4a2l_A 445 RNSQLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFT-TIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG-L 519 (795)
T ss_dssp TTSCCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEE-ECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC-E
T ss_pred CCCCcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEE-EccccccccccCCceEEEEEECCCCCEEEEeC-Cc-e
Confidence 00123468899999988876644 4 45778998776543 2221 235788999989998665444 44 5
Q ss_pred EEecC
Q 017296 365 ALWEL 369 (374)
Q Consensus 365 ~~W~~ 369 (374)
..|+.
T Consensus 520 ~~~~~ 524 (795)
T 4a2l_A 520 SVFKQ 524 (795)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 55553
No 264
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.40 E-value=0.41 Score=42.31 Aligned_cols=140 Identities=15% Similarity=0.304 Sum_probs=86.8
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCC--------CceEEEec--CCeEEEEEcCCCCCeEEEEE
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESC--------NGGISGGA--DQKIVLYNLDHSTGSCVIKK 292 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~--------~~~~s~s~--D~~i~lwd~~~~~~~~~~~~ 292 (374)
.++.....+.+.+||+. +..++.+.. ..++.+.+-+.. ..+++.-. +++|++|+++..++......
T Consensus 42 ~ii~t~k~~gL~Vydl~--G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLD--GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp EEEEEETTTEEEEEETT--SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred EEEEEcCCCCEEEEcCC--CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 35556677899999993 455555532 455555553321 12344444 68999998865444322111
Q ss_pred e----eecCCCCeEEEEE--CCC-CC-EEEEEeCCCeEEEEEcc-------CCeEEEEecccCCceEEEEEeCCCCEEEE
Q 017296 293 E----INLERPGISGTSI--RPD-SK-IAATAGWDRRVRIYNYR-------KGSALAILKYHHATCNAVSFSSDCKLMAS 357 (374)
Q Consensus 293 ~----~~~~~~~v~~~~~--sp~-~~-~l~s~~~dg~v~iwd~~-------~~~~~~~~~~h~~~v~~v~~sp~~~~las 357 (374)
. +......+..+|+ +|. ++ ++.....+|.+..|++. +.+.+.++.- ...+-.++..+....|..
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv 196 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYI 196 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEE
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEE
Confidence 1 1111144667777 774 44 67778889999999983 2345556653 346777888888888888
Q ss_pred EeCCCcEEEecC
Q 017296 358 ASEDSTVALWEL 369 (374)
Q Consensus 358 ~s~D~~v~~W~~ 369 (374)
+-+|.- ||.+
T Consensus 197 ~eEd~G--Iw~~ 206 (355)
T 3amr_A 197 AEEDEA--IWKF 206 (355)
T ss_dssp EETTTE--EEEE
T ss_pred ecccce--EEEE
Confidence 888855 5655
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.35 E-value=0.093 Score=52.07 Aligned_cols=132 Identities=14% Similarity=0.044 Sum_probs=73.0
Q ss_pred cEEEEeccCC-CCceeeeecCccCeEEEEEecCCCceEEEecC-----CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEE
Q 017296 232 SILVWDIRNP-GIPLTAMKVHLEPVLCLSIDESCNGGISGGAD-----QKIVLYNLDHSTGSCVIKKEINLERPGISGTS 305 (374)
Q Consensus 232 ~i~iwdl~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (374)
+|+++|+... ......+. .....+.+++++..++..+.| ..|.++++.+....-.+..+.. ......++.
T Consensus 202 ~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~-~~~~~~~~~ 277 (751)
T 2xe4_A 202 TIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEH-NPLFSAFMY 277 (751)
T ss_dssp EEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECC-CTTCEEEEE
T ss_pred EEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecC-CCceEEEEE
Confidence 5999999764 21111111 113356788888877776665 3577777765432211211111 123456789
Q ss_pred ECCCCCEEEEEeC---CCeEEEEEccCC--eE-EEEe-cccCCceEEEEEeCCCCEEEEEeCC--CcEEEe
Q 017296 306 IRPDSKIAATAGW---DRRVRIYNYRKG--SA-LAIL-KYHHATCNAVSFSSDCKLMASASED--STVALW 367 (374)
Q Consensus 306 ~sp~~~~l~s~~~---dg~v~iwd~~~~--~~-~~~~-~~h~~~v~~v~~sp~~~~las~s~D--~~v~~W 367 (374)
+|||+++|+.... ...|.++|+.++ +. +..+ ....+...++.|+..+.+++.+..| +.-+||
T Consensus 278 ~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~ 348 (751)
T 2xe4_A 278 KAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLL 348 (751)
T ss_dssp ECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEE
T ss_pred ECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEE
Confidence 9999998875553 345788888765 22 1333 3344555666665544455555544 344444
No 266
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.24 E-value=0.02 Score=56.85 Aligned_cols=113 Identities=12% Similarity=0.010 Sum_probs=69.3
Q ss_pred CeEEEEEe-cCCCceEEEec-----CCeEEEEEcCCC-CCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC-----Ce
Q 017296 254 PVLCLSID-ESCNGGISGGA-----DQKIVLYNLDHS-TGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RR 321 (374)
Q Consensus 254 ~v~~~~~~-~~~~~~~s~s~-----D~~i~lwd~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----g~ 321 (374)
.+....++ |++..++-+.. ..+|+++|+++. .. . ...+.. ...+++|+||++.|+-...| ..
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l-~~~~~~---~~~~~~WspDg~~l~y~~~d~~~~~~~ 248 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT--I-ADKVSG---TNGEIVWGPDHTSLFYVTKDETLRENK 248 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC--C-CCCEEE---ECSCCEECSSTTEEEEEEECTTCCEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe--C-CccccC---ceeeEEEecCCCEEEEEEECCCCCCCE
Confidence 56778899 99987764322 235999998764 31 1 001110 12357899999887766654 25
Q ss_pred EEEEEccCCe--EEEEec-ccCCceEEEEEeCCCCEEEEEe---CCCcEEEecCCCC
Q 017296 322 VRIYNYRKGS--ALAILK-YHHATCNAVSFSSDCKLMASAS---EDSTVALWELYPP 372 (374)
Q Consensus 322 v~iwd~~~~~--~~~~~~-~h~~~v~~v~~sp~~~~las~s---~D~~v~~W~~~~~ 372 (374)
|.++++.++. ....+. .+......+.|+|||++|+..+ ....|.++++..+
T Consensus 249 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 249 VWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 7778886653 122222 2234566789999999887654 2345666776543
No 267
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.23 E-value=0.56 Score=41.10 Aligned_cols=137 Identities=17% Similarity=0.136 Sum_probs=83.9
Q ss_pred CCcEEEEecc---CCCCc-eeeeecC-----------ccCeEEEEEecCCCceEEEecC-CeEEEEEcCCCCCeEEEEEe
Q 017296 230 DGSILVWDIR---NPGIP-LTAMKVH-----------LEPVLCLSIDESCNGGISGGAD-QKIVLYNLDHSTGSCVIKKE 293 (374)
Q Consensus 230 dg~i~iwdl~---~~~~~-~~~~~~h-----------~~~v~~~~~~~~~~~~~s~s~D-~~i~lwd~~~~~~~~~~~~~ 293 (374)
+..|..||+. +.... ...+... ......+++|++++..++++.- +.|...+.+... ...+...
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~-~~~~~~~ 177 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKT-VSTFAWE 177 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCC-EEEEEEC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCE-Eeeeeec
Confidence 6789999997 43221 1122211 1247889999999999988888 887777665431 1111111
Q ss_pred e--ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeE--EEEec--cc---CCceEE-EEEeCCCCE-EEEEeCCC
Q 017296 294 I--NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA--LAILK--YH---HATCNA-VSFSSDCKL-MASASEDS 362 (374)
Q Consensus 294 ~--~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~--~h---~~~v~~-v~~sp~~~~-las~s~D~ 362 (374)
. .....+.+.++++|++++|+.....|.+..+|+.+... +. +. +. -..... ++--.+|+. |++.+..+
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~ 256 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNESVLVGARAPY 256 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTEEEEEEEETTE
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCcccccccccCCEEEEEEcCCCC
Confidence 1 12234577999999999888787799999999875443 22 11 22 112333 233357775 67777666
Q ss_pred cEEEec
Q 017296 363 TVALWE 368 (374)
Q Consensus 363 ~v~~W~ 368 (374)
.+.+-+
T Consensus 257 ~~~l~S 262 (334)
T 2p9w_A 257 AISFRS 262 (334)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 655543
No 268
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.06 E-value=0.5 Score=41.35 Aligned_cols=142 Identities=13% Similarity=0.038 Sum_probs=84.8
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecC-CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDES-CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
+.+-...+.|..+++.........+.........+++++. +..+++-...+.|.+.+++........ ........
T Consensus 50 yw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~----~~~~~~P~ 125 (318)
T 3sov_A 50 YWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLF----WQELDQPR 125 (318)
T ss_dssp EEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE----CSSCSSEE
T ss_pred EEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEE----eCCCCCcc
Confidence 3444556778888875432111222222345667888864 444456667789999998754322221 12223567
Q ss_pred EEEECCCCCEEEEEeC--CCeEEEEEccCCeEEEEe-cccCCceEEEEEeCCCCEE-EEEeCCCcEEEecCC
Q 017296 303 GTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLM-ASASEDSTVALWELY 370 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~--dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l-as~s~D~~v~~W~~~ 370 (374)
.+++.|.+..|.-+.+ .+.|...++. |+....+ ...-...+.++|+|++..| ++=+..+.|..++++
T Consensus 126 giavdp~~g~ly~td~~~~~~I~r~~~d-G~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 126 AIALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp EEEEEGGGTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEEEeCCCCEEEEEecCCCCEEEEEEcC-CCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 8999997666665553 5788888875 3333333 2334567899999966644 444566778777764
No 269
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.05 E-value=0.68 Score=41.72 Aligned_cols=142 Identities=12% Similarity=0.055 Sum_probs=84.1
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCC-CceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
+++-...+.|..+++... .....+.........+++++.. ..+++-...+.|.+.+++........ ........
T Consensus 131 y~~D~~~~~I~r~~~~g~-~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~----~~~l~~P~ 205 (386)
T 3v65_B 131 FWSDVTLDRILRANLNGS-NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL----WQSLEKPR 205 (386)
T ss_dssp EEEETTTTEEEEEETTSC-CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEE----CSSCSCEE
T ss_pred EEEeCCCCcEEEEecCCC-CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEee----cCCCCCCc
Confidence 445556778888887642 2122222223345678888643 33456666788998888754322221 11223467
Q ss_pred EEEECCCCCEEEEEeC-C-CeEEEEEccCCeEEEEecccCCceEEEEEeCCCCE-EEEEeCCCcEEEecCC
Q 017296 303 GTSIRPDSKIAATAGW-D-RRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKL-MASASEDSTVALWELY 370 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~-d-g~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~-las~s~D~~v~~W~~~ 370 (374)
.+++.|.+..|.-+.+ . +.|...++............-...+.|+|+|++.. .++-+..+.|..+++.
T Consensus 206 giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 206 AIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred EEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 8999997766654443 4 68888887543322223333456789999986654 4554566778777753
No 270
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.97 E-value=1.5 Score=43.65 Aligned_cols=139 Identities=12% Similarity=0.103 Sum_probs=89.1
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeec-------CccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEE-ee
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKV-------HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKK-EI 294 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~-------h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~-~~ 294 (374)
.+-.|+.++.|..|+..... +..+.. ....|.++..++++. +..|..++.+..||..... ..... ..
T Consensus 322 ~lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~--~~~~~~~~ 396 (795)
T 4a2l_A 322 GMWLGTYFGGLNYYHPIRNR--FKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQR--FTSYTLQE 396 (795)
T ss_dssp CEEEEESSSCEEEECGGGGS--SEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCC--EEEECCC-
T ss_pred CEEEEECCCCeEEeCCCccc--ceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCc--EEEEecCC
Confidence 36778888899999875422 221211 234689999988765 6778888889999875332 21111 00
Q ss_pred -----ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEec-----ccCCceEEEEEeCCCCEEEEEeCCCcE
Q 017296 295 -----NLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILK-----YHHATCNAVSFSSDCKLMASASEDSTV 364 (374)
Q Consensus 295 -----~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~-----~h~~~v~~v~~sp~~~~las~s~D~~v 364 (374)
......|.+++..+++++|-.|+.++-+.+||..+++.. .+. .+...|.++...++|++.+... +| +
T Consensus 397 ~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~G-l 473 (795)
T 4a2l_A 397 DESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTL-SA-L 473 (795)
T ss_dssp -----CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEES-SC-E
T ss_pred CCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEec-Cc-e
Confidence 012346888999889984555777778999998876643 332 1345789999888888655443 44 5
Q ss_pred EEecC
Q 017296 365 ALWEL 369 (374)
Q Consensus 365 ~~W~~ 369 (374)
.+|+.
T Consensus 474 ~~~~~ 478 (795)
T 4a2l_A 474 VRFNP 478 (795)
T ss_dssp EEEET
T ss_pred eEEeC
Confidence 55654
No 271
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=95.90 E-value=0.45 Score=42.22 Aligned_cols=141 Identities=13% Similarity=0.047 Sum_probs=84.2
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCC-CceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
+.+-...+.|..+++.... ..............+++++.. ..+++-...+.|.+.+++........ ........
T Consensus 88 y~~D~~~~~I~r~~~~g~~-~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~----~~~l~~P~ 162 (349)
T 3v64_C 88 FWSDVTLDRILRANLNGSN-VEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLL----WQSLEKPR 162 (349)
T ss_dssp EEEETTTTEEEEEETTSCS-CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE----CTTCSCEE
T ss_pred EEEeccCCceEEEecCCCC-ceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEE----eCCCCCcc
Confidence 4445566788888876422 122222223445778898644 44456666789999998754322221 11223467
Q ss_pred EEEECCCCCEEEEEe-CC-CeEEEEEccCCeEEEEe-cccCCceEEEEEeCCCCEE-EEEeCCCcEEEecCC
Q 017296 303 GTSIRPDSKIAATAG-WD-RRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLM-ASASEDSTVALWELY 370 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~-~d-g~v~iwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l-as~s~D~~v~~W~~~ 370 (374)
.+++.|.+..|.-+. .. +.|...++.. .....+ ...-...+.++|+|++..| ++-+..+.|..++++
T Consensus 163 ~iavdp~~g~ly~td~~~~~~I~r~~~dG-~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 163 AIALHPMEGTIYWTDWGNTPRIEASSMDG-SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred eEEEecCcCeEEEeccCCCCEEEEEeCCC-CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 899999666555444 34 7888888753 333333 2234567899999866644 444556777777653
No 272
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.71 E-value=1 Score=39.82 Aligned_cols=192 Identities=14% Similarity=0.185 Sum_probs=108.5
Q ss_pred EEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCce--EEEE-Eec--CCcEEEEecc
Q 017296 165 AVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFV--NVLA-GYE--DGSILVWDIR 239 (374)
Q Consensus 165 ~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-gs~--dg~i~iwdl~ 239 (374)
+++....+-+.++|+ +++.+..+.... ..++-+. ..|.. .+.. .+++ .-. +++|.+|++.
T Consensus 43 ii~t~k~~gL~Vydl-~G~~l~~~~~g~----------~nnVD~r-~~~~l---~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 43 LITTNKKSGLVVYSL-DGKMLHSYNTGK----------LNNVDIR-YDFPL---NGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp EEEEETTTEEEEEET-TSCEEEEECCSC----------EEEEEEE-EEEEE---TTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred EEEEcCCCCEEEEcC-CCcEEEEccCCC----------cccEEEe-ccccc---CCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 333444568999999 888887775210 0111110 01110 0111 1222 333 5899999773
Q ss_pred CCCCceeeeec------Cc-cCeEEEEE--ecC-CC-ceEEEecCCeEEEEEcCCC-CC--eEEEEEeeecCCCCeEEEE
Q 017296 240 NPGIPLTAMKV------HL-EPVLCLSI--DES-CN-GGISGGADQKIVLYNLDHS-TG--SCVIKKEINLERPGISGTS 305 (374)
Q Consensus 240 ~~~~~~~~~~~------h~-~~v~~~~~--~~~-~~-~~~s~s~D~~i~lwd~~~~-~~--~~~~~~~~~~~~~~v~~~~ 305 (374)
-...++..+.. .. ..+..+++ ++. +. +++....+|.+..|++... .+ ...+..++... ..+-.+.
T Consensus 108 p~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~Egcv 186 (355)
T 3amr_A 108 GKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMA 186 (355)
T ss_dssp TTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEE
T ss_pred CCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEE
Confidence 11223443321 11 34455566 653 32 4677788899999998432 22 22223333332 3577888
Q ss_pred ECCCCCEEEEEeCCCeEEEEEcc-----CCeEEEEec-ccC-CceEEEEE--eCCCC-E-EEEEeCCCcEEEecCCCC
Q 017296 306 IRPDSKIAATAGWDRRVRIYNYR-----KGSALAILK-YHH-ATCNAVSF--SSDCK-L-MASASEDSTVALWELYPP 372 (374)
Q Consensus 306 ~sp~~~~l~s~~~dg~v~iwd~~-----~~~~~~~~~-~h~-~~v~~v~~--sp~~~-~-las~s~D~~v~~W~~~~~ 372 (374)
+.+....|..+-+|.-|..++.+ +++.+..+. +|. ..+..|++ .++++ + |+|+-.+.+.-+|+...+
T Consensus 187 vDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~ 264 (355)
T 3amr_A 187 ADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGK 264 (355)
T ss_dssp EETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTT
T ss_pred EcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCC
Confidence 88888889889999777777754 344555542 333 36888887 56666 4 455546778999988644
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.67 E-value=1.1 Score=40.54 Aligned_cols=140 Identities=14% Similarity=0.075 Sum_probs=80.7
Q ss_pred ecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCce-EEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEE
Q 017296 228 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSI 306 (374)
Q Consensus 228 s~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 306 (374)
+..+.|+..|+.... ...+......+..+++++....+ ++-...+.|..++++.....................+++
T Consensus 89 ~~~~~I~~i~l~~~~--~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glav 166 (400)
T 3p5b_L 89 TNRHEVRKMTLDRSE--YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 166 (400)
T ss_dssp EETTEEEEECTTSCS--CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEE
T ss_pred eccceeEEEccCCcc--eeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEE
Confidence 345789999986432 23333345678889999754444 455567889989886421000001111112235678999
Q ss_pred CCC-CCEEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEe--CCCcEEEecC
Q 017296 307 RPD-SKIAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASAS--EDSTVALWEL 369 (374)
Q Consensus 307 sp~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s--~D~~v~~W~~ 369 (374)
.+. +.+..+-...+.|.+.++........+...-.....|++.|.+.+|.-+. ..+.|...++
T Consensus 167 D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 167 DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEET
T ss_pred EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeC
Confidence 984 55555666678999998865443333333445688999999655444333 2355655544
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.66 E-value=1.2 Score=40.31 Aligned_cols=143 Identities=6% Similarity=-0.010 Sum_probs=84.5
Q ss_pred EEEEecCCcEEEEeccCCC---CceeeeecCccCeEEEEEecC-CCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCC
Q 017296 224 VLAGYEDGSILVWDIRNPG---IPLTAMKVHLEPVLCLSIDES-CNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 299 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~---~~~~~~~~h~~~v~~~~~~~~-~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 299 (374)
+.+-...+.|..+++.... .....+.........++++.. +..+++-...+.|.+.+++........ .....
T Consensus 127 ywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~----~~~~~ 202 (400)
T 3p5b_L 127 YWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF----RENGS 202 (400)
T ss_dssp EEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEE----ECSSC
T ss_pred EEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEE----eCCCC
Confidence 4444556778888875311 112222223456778999874 444456667789999988754322221 12223
Q ss_pred CeEEEEECCCCCEEEEEeC--CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEE-eCCCcEEEecCC
Q 017296 300 GISGTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASA-SEDSTVALWELY 370 (374)
Q Consensus 300 ~v~~~~~sp~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~-s~D~~v~~W~~~ 370 (374)
....+++.|.+.+|.-+.+ .+.|...++............-...+.|++.|++..|.-+ +....|...+++
T Consensus 203 ~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 203 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 4788999997666655543 3788888885433332333334678899999877655443 556677776653
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.60 E-value=0.41 Score=43.96 Aligned_cols=140 Identities=8% Similarity=0.008 Sum_probs=81.4
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEecC----C-eEEEEEcCCCCCeEEEEEeeecCC
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGAD----Q-KIVLYNLDHSTGSCVIKKEINLER 298 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D----~-~i~lwd~~~~~~~~~~~~~~~~~~ 298 (374)
|+.+...+.|+.+|+... .+..+.........+++++++. ++.+... . .+...+............ ..
T Consensus 155 Lyv~D~~~~I~~id~~~g--~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~----~~ 227 (433)
T 4hw6_A 155 LYWVGQRDAFRHVDFVNQ--YVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC----NA 227 (433)
T ss_dssp EEEECBTSCEEEEETTTT--EEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE----EC
T ss_pred EEEEeCCCCEEEEECCCC--EEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc----cc
Confidence 444433388999998542 2344434455688999999988 4444332 1 233332221110001111 11
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCeEEEEEccCCeEEEEecc--cCCceEEEEEeCCCC-EEEEEeCCCcEEEecCC
Q 017296 299 PGISGTSIRP-DSKIAATAGWDRRVRIYNYRKGSALAILKY--HHATCNAVSFSSDCK-LMASASEDSTVALWELY 370 (374)
Q Consensus 299 ~~v~~~~~sp-~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~-~las~s~D~~v~~W~~~ 370 (374)
.....++++| ++.+.++-..++.|+.+|..+++....+.. ....-..++|+|+|+ +.++-.....|+.+++.
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 2355688999 677666666778999999877765222211 122334699999998 55666667888887654
No 276
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.47 E-value=0.5 Score=41.38 Aligned_cols=145 Identities=10% Similarity=0.104 Sum_probs=86.7
Q ss_pred EEEecCCcEEEEeccCCCCceeeeec----Cc--cCeEEEEE---ecCCCceEEEe-------------cCCeEEEEEcC
Q 017296 225 LAGYEDGSILVWDIRNPGIPLTAMKV----HL--EPVLCLSI---DESCNGGISGG-------------ADQKIVLYNLD 282 (374)
Q Consensus 225 ~~gs~dg~i~iwdl~~~~~~~~~~~~----h~--~~v~~~~~---~~~~~~~~s~s-------------~D~~i~lwd~~ 282 (374)
++.-..++|..||..........+.+ .. ..+..|.+ |+.+..++... .+..+..+|+.
T Consensus 29 vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~ 108 (334)
T 2p9w_A 29 QSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLP 108 (334)
T ss_dssp EEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESS
T ss_pred EEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCC
Confidence 33346788999987532211112211 01 13467888 67765544332 26789999987
Q ss_pred ---CCCCeEEEEEeee----c-------CCCCeEEEEECCCCCEEEEEeCC-CeEEEEEccCCeEEEEec-cc-----CC
Q 017296 283 ---HSTGSCVIKKEIN----L-------ERPGISGTSIRPDSKIAATAGWD-RRVRIYNYRKGSALAILK-YH-----HA 341 (374)
Q Consensus 283 ---~~~~~~~~~~~~~----~-------~~~~v~~~~~sp~~~~l~s~~~d-g~v~iwd~~~~~~~~~~~-~h-----~~ 341 (374)
+....... .+. . .......+++.++|+.-++++.- +.|...+.. ++.+..+. .. .-
T Consensus 109 ~~~tg~~~~~~--dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd-G~~~~~~~~~~~~~~~~~ 185 (334)
T 2p9w_A 109 LSENSKPVWSV--NFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD-GKTVSTFAWESGNGGQRP 185 (334)
T ss_dssp CCTTCCCSEEE--ESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT-SCCEEEEEECCCCSSSCC
T ss_pred cCCCCCEEEEe--cCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC-CCEEeeeeecCCCccccc
Confidence 33322221 111 0 11247789999999988888877 777766653 44333322 11 12
Q ss_pred ceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 342 TCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 342 ~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
..+.|+++|+|+.|+....++.+..+|+..|
T Consensus 186 G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 186 GYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp SCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 3678999999997776655998988887543
No 277
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=95.37 E-value=1 Score=37.59 Aligned_cols=138 Identities=12% Similarity=0.005 Sum_probs=80.5
Q ss_pred EEEEecC--CcEEEEeccCCCCceeeeecCccC-eEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCC
Q 017296 224 VLAGYED--GSILVWDIRNPGIPLTAMKVHLEP-VLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG 300 (374)
Q Consensus 224 ~~~gs~d--g~i~iwdl~~~~~~~~~~~~h~~~-v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~ 300 (374)
+.+...+ ..|+.+|+++. ............ -..++++.+. .....-.++.+.++|.++.. . ..++.....
T Consensus 34 yestG~~g~S~v~~vD~~tg-kv~~~~~l~~~~fgeGi~~~~~~-ly~ltw~~~~v~v~D~~tl~--~--~~ti~~~~~- 106 (243)
T 3mbr_X 34 YESTGETGRSSVRKVDLETG-RILQRAEVPPPYFGAGIVAWRDR-LIQLTWRNHEGFVYDLATLT--P--RARFRYPGE- 106 (243)
T ss_dssp EEEECCTTSCEEEEEETTTC-CEEEEEECCTTCCEEEEEEETTE-EEEEESSSSEEEEEETTTTE--E--EEEEECSSC-
T ss_pred EEECCCCCCceEEEEECCCC-CEEEEEeCCCCcceeEEEEeCCE-EEEEEeeCCEEEEEECCcCc--E--EEEEeCCCC-
Confidence 3444443 58999999864 334433322221 1234454432 23445678999999986432 2 223333222
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecccC-----CceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 301 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYHH-----ATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 301 v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h~-----~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
...++++++.|+.+..+++|.++|..+.+.+.++.-.. ..++.+.+. +|+..|....+..|.+-|...
T Consensus 107 --Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 107 --GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp --CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTT
T ss_pred --ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCC
Confidence 23344566666555668899999999988877665321 355667765 777666665566777666543
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.27 E-value=1.3 Score=38.42 Aligned_cols=135 Identities=12% Similarity=0.049 Sum_probs=77.7
Q ss_pred CCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCc-eEEEecCCeEEEEEcCCC---CCeEEEEEeeecCCCCeEEEE
Q 017296 230 DGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHS---TGSCVIKKEINLERPGISGTS 305 (374)
Q Consensus 230 dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~s~s~D~~i~lwd~~~~---~~~~~~~~~~~~~~~~v~~~~ 305 (374)
.+.|+..|+..... .. +.........+.+++.... +++-...+.|..++++.. +..... ..........++
T Consensus 9 ~~~I~~i~~~~~~~-~~-~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~---~~~~~~~p~gla 83 (316)
T 1ijq_A 9 RHEVRKMTLDRSEY-TS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV---ISRDIQAPDGLA 83 (316)
T ss_dssp BSSEEEEETTSCCC-EE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE---ECSSCSCCCEEE
T ss_pred CCeEEEEECCCcce-Ee-hhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE---EeCCCCCcCEEE
Confidence 45789999875322 22 2233456788999875444 455566789999988641 111111 111113456889
Q ss_pred ECCCCC-EEEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCC--CcEEEecC
Q 017296 306 IRPDSK-IAATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASED--STVALWEL 369 (374)
Q Consensus 306 ~sp~~~-~l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D--~~v~~W~~ 369 (374)
+.+.++ +.++-..++.|.+.++........+.........+++.|++..|.-+... +.|...++
T Consensus 84 vd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~ 150 (316)
T 1ijq_A 84 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 150 (316)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcC
Confidence 987544 44555678899999986433322233334577899999966644433332 45655543
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.25 E-value=1.2 Score=37.58 Aligned_cols=185 Identities=11% Similarity=0.089 Sum_probs=102.9
Q ss_pred EEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCCCC
Q 017296 164 MAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNPGI 243 (374)
Q Consensus 164 ~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~~~ 243 (374)
+.++...++.|...|+. ++.+..+.-.. +. +..+ ++ +. ..+. .+++.-.++.+.++++.....
T Consensus 41 L~aV~d~~~~I~~ld~~-g~v~~~i~l~g------~~-D~EG--Ia---~~---~~g~-~~vs~E~~~~l~~~~v~~~~~ 103 (255)
T 3qqz_A 41 LFSTINKPAAIVEMTTN-GDLIRTIPLDF------VK-DLET--IE---YI---GDNQ-FVISDERDYAIYVISLTPNSE 103 (255)
T ss_dssp EEEEEETTEEEEEEETT-CCEEEEEECSS------CS-SEEE--EE---EC---STTE-EEEEETTTTEEEEEEECTTCC
T ss_pred EEEEECCCCeEEEEeCC-CCEEEEEecCC------CC-ChHH--eE---Ee---CCCE-EEEEECCCCcEEEEEcCCCCe
Confidence 44445557788888887 77666664211 10 0011 11 11 1222 234434557788887754332
Q ss_pred --ceeeee------cCccCeEEEEEecCCCceEEEecCCeEEEEEcCCC--CCeEEEEEe--e--ecCCCCeEEEEECCC
Q 017296 244 --PLTAMK------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHS--TGSCVIKKE--I--NLERPGISGTSIRPD 309 (374)
Q Consensus 244 --~~~~~~------~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~--~~~~~~~~~--~--~~~~~~v~~~~~sp~ 309 (374)
...... ........+++++....++++.......+|.++.. ......... + ......+.+++|+|.
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 111111 12345688999998878888777666677766521 111111111 0 112235789999996
Q ss_pred CC-EEEEEeCCCeEEEEEccCCeEEEEe--c-cc------CCceEEEEEeCCCCEEEEEeCCCcEEEe
Q 017296 310 SK-IAATAGWDRRVRIYNYRKGSALAIL--K-YH------HATCNAVSFSSDCKLMASASEDSTVALW 367 (374)
Q Consensus 310 ~~-~l~s~~~dg~v~iwd~~~~~~~~~~--~-~h------~~~v~~v~~sp~~~~las~s~D~~v~~W 367 (374)
.. +++.....+.+..+|.+ ++.+..+ . +. ..+.-.|+|.++|.+.++ |+.+.++.+
T Consensus 184 tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 184 KNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp TTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred CCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 44 55666677889899875 5555433 2 21 136788999999986665 666654444
No 280
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=94.93 E-value=0.57 Score=41.63 Aligned_cols=102 Identities=14% Similarity=0.132 Sum_probs=60.6
Q ss_pred cCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeee---cCCCCeEEEEECCC---CCEE-EEEeCC-----C
Q 017296 253 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN---LERPGISGTSIRPD---SKIA-ATAGWD-----R 320 (374)
Q Consensus 253 ~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~---~~~~~v~~~~~sp~---~~~l-~s~~~d-----g 320 (374)
.....++|++++. ++.+..++.|.+++ + . .......+. ....+...++|+|+ ++.| ++-..+ +
T Consensus 31 ~~P~~ia~~pdG~-l~V~e~~g~I~~i~-~-g--~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 31 EVPWALAFLPDGG-MLIAERPGRIRLFR-E-G--RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp SCEEEEEECTTSC-EEEEETTTEEEEEE-T-T--EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCceEEEEcCCCe-EEEEeCCCeEEEEE-C-C--CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 3456788999887 45556679999987 3 2 211111111 12346889999998 4444 443332 6
Q ss_pred eEEEEEccCCe-----E-EEEec---ccCCceEEEEEeCCCCEEEEEe
Q 017296 321 RVRIYNYRKGS-----A-LAILK---YHHATCNAVSFSSDCKLMASAS 359 (374)
Q Consensus 321 ~v~iwd~~~~~-----~-~~~~~---~h~~~v~~v~~sp~~~~las~s 359 (374)
.|..|+...++ . +..+. +.......++|.|||.+.++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 78888876431 1 22233 1112346899999998777654
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.80 E-value=2.2 Score=42.38 Aligned_cols=141 Identities=11% Similarity=0.014 Sum_probs=79.9
Q ss_pred EecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCC-CceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEE
Q 017296 227 GYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTS 305 (374)
Q Consensus 227 gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~ 305 (374)
-+....|+..++.... ...+......+..|++++.. ..+++-...+.|+.++++...........+.........++
T Consensus 400 ~an~~~Ir~i~l~~~~--~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLA 477 (791)
T 3m0c_C 400 FTNRHEVRKMTLDRSE--YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLA 477 (791)
T ss_dssp EECBSSEEEECTTSCC--CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEE
T ss_pred cccccceeEeeccCCc--ceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceee
Confidence 3445678888886432 23333345667889998743 34456666788999988642110000111121223466899
Q ss_pred ECCCCCE-EEEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeC--CCcEEEecC
Q 017296 306 IRPDSKI-AATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE--DSTVALWEL 369 (374)
Q Consensus 306 ~sp~~~~-l~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~--D~~v~~W~~ 369 (374)
+.+.++. .++-...++|.+.++........+...-.....|++.|.+.+|.-+.+ ...|...++
T Consensus 478 vD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 478 VDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred eeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEec
Confidence 9987754 455566789999998644433333334456889999997554433322 245555443
No 282
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=94.65 E-value=1.7 Score=36.53 Aligned_cols=118 Identities=11% Similarity=0.129 Sum_probs=73.8
Q ss_pred eecCccCeEEEEEecCCCceEE-EecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q 017296 248 MKVHLEPVLCLSIDESCNGGIS-GGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYN 326 (374)
Q Consensus 248 ~~~h~~~v~~~~~~~~~~~~~s-~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd 326 (374)
+.+-...+..++++++...+++ ...++.|...|+. +.......+.. ....-.+++.++++++++.-.++.+.+++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~---g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN---GDLIRTIPLDF-VKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT---CCEEEEEECSS-CSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC---CCEEEEEecCC-CCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 3344567888999987665554 5557777777765 33222211221 23467888999998877766778899998
Q ss_pred ccCCeE---EEEec-c-----cCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 327 YRKGSA---LAILK-Y-----HHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 327 ~~~~~~---~~~~~-~-----h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
+..... +.... . .-...-.++|.|++..|..+.+.....+|.+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 865432 22221 1 1124578999999876666666555566554
No 283
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.62 E-value=1.9 Score=37.16 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=65.2
Q ss_pred CeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC-C-eEEEEEccCCe
Q 017296 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-R-RVRIYNYRKGS 331 (374)
Q Consensus 254 ~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-g-~v~iwd~~~~~ 331 (374)
....+++++++..+++....+.|..||.+.. ... .... ......++++|+++++++.... + .|..+|..+++
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~---~~~--~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN---QQI--HATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC---EEE--EEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc---eEE--EEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 3456778777765555557788888876532 111 1111 2347789999999976655443 2 46667777776
Q ss_pred EEEEec-ccCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 332 ALAILK-YHHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 332 ~~~~~~-~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
...... ........++..+++..+++-+.++.|..++.
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~ 145 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDV 145 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEET
T ss_pred EEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeC
Confidence 432221 11233455555566666666556777766664
No 284
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=94.61 E-value=1.7 Score=36.38 Aligned_cols=142 Identities=12% Similarity=-0.052 Sum_probs=82.1
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEec---CCeEEEEEcCCCCCeEEEEEeeecCCC
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA---DQKIVLYNLDHSTGSCVIKKEINLERP 299 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~---D~~i~lwd~~~~~~~~~~~~~~~~~~~ 299 (374)
.+++-...+.|..+++... ...............+++++++..++.+.. .+.|..++++....... . .....
T Consensus 93 lyv~d~~~~~I~~~~~~g~-~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~-~---~~~~~ 167 (267)
T 1npe_A 93 IFWTDSQLDRIEVAKMDGT-QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRIL-A---QDNLG 167 (267)
T ss_dssp EEEEETTTTEEEEEETTSC-SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEE-E---CTTCS
T ss_pred EEEEECCCCEEEEEEcCCC-CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEE-E---ECCCC
Confidence 3455566788999998532 211122222245688999986444444333 36888888865432211 1 11223
Q ss_pred CeEEEEECCCCCEE-EEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 300 GISGTSIRPDSKIA-ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 300 ~v~~~~~sp~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
....++++|+++.| ++-...++|.++|.........+. .......++.. ++.++++....+.|..++...
T Consensus 168 ~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~-~~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 168 LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE-GLQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE-CCCSEEEEEEE-TTEEEEEETTTTEEEEEETTT
T ss_pred CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec-CCCCceEEEEe-CCEEEEEECCCCeEEEEeCCC
Confidence 46789999987665 445556899999986544333333 22344566653 344555555567888777643
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.56 E-value=2.4 Score=42.10 Aligned_cols=142 Identities=6% Similarity=-0.015 Sum_probs=83.6
Q ss_pred EEEEecCCcEEEEeccCCC---CceeeeecCccCeEEEEEecCCC-ceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCC
Q 017296 224 VLAGYEDGSILVWDIRNPG---IPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERP 299 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~---~~~~~~~~h~~~v~~~~~~~~~~-~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~ 299 (374)
+++-...+.|+.+++.... .....+.........|+++..+. .+++-...+.|.+.+++......+. .....
T Consensus 439 Y~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~----~~~l~ 514 (791)
T 3m0c_C 439 YWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLF----RENGS 514 (791)
T ss_dssp EEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEE----ECTTC
T ss_pred EEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEE----eCCCC
Confidence 4445556778888775311 11222222345567899987653 4456667889999998754322221 12223
Q ss_pred CeEEEEECCCCCEEEEEeC--CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEE-EEEeCCCcEEEecC
Q 017296 300 GISGTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASASEDSTVALWEL 369 (374)
Q Consensus 300 ~v~~~~~sp~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-as~s~D~~v~~W~~ 369 (374)
....+++.|...+|.-+.+ .+.|.+.++........+...-.....|++.+.+..| ++=.....|...++
T Consensus 515 ~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 515 KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 4789999998666655543 3789988885443333333334678899999766544 44344556666655
No 286
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=94.46 E-value=1.9 Score=39.40 Aligned_cols=143 Identities=8% Similarity=0.044 Sum_probs=84.9
Q ss_pred EEecCCcEEEEeccCCCCceeeeec-CccCeEEEEEecCCCce-EEEecCCeEEEEEcCCCCCeE----EEEEeee----
Q 017296 226 AGYEDGSILVWDIRNPGIPLTAMKV-HLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSC----VIKKEIN---- 295 (374)
Q Consensus 226 ~gs~dg~i~iwdl~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~-~s~s~D~~i~lwd~~~~~~~~----~~~~~~~---- 295 (374)
+-..++.|+.+|..........+.. ....-..+++++++..+ ++-...+.|..++++..++.. .+.....
T Consensus 245 ~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~ 324 (433)
T 4hw6_A 245 TRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGW 324 (433)
T ss_dssp CBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCC
T ss_pred EECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCcc
Confidence 3345677888887532210111111 11223469999998744 555567899998876433221 1111100
Q ss_pred -------cCCCCeEEEEE---------CCCCCEEEEEeCCCeEEEEEccCCeEEEEeccc------------------CC
Q 017296 296 -------LERPGISGTSI---------RPDSKIAATAGWDRRVRIYNYRKGSALAILKYH------------------HA 341 (374)
Q Consensus 296 -------~~~~~v~~~~~---------sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h------------------~~ 341 (374)
..-..-..++| .+++.+.++-...++|+.++. +++.. ++.+. -.
T Consensus 325 ~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~ 402 (433)
T 4hw6_A 325 VDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRVT-TYAGRGNSREWGYVDGELRSQALFN 402 (433)
T ss_dssp BCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCS
T ss_pred CCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCEE-EEEeCCCCCccccCCCccccccEeC
Confidence 01123566899 777877777777889999985 56433 33221 13
Q ss_pred ceEEEEEe-CCCCEEEEEeCCCcEEEecCC
Q 017296 342 TCNAVSFS-SDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 342 ~v~~v~~s-p~~~~las~s~D~~v~~W~~~ 370 (374)
....|++. ++|.++++=.....|+..+++
T Consensus 403 ~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 403 HPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp SEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 47889999 678877777778888887764
No 287
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.10 E-value=2.9 Score=36.91 Aligned_cols=112 Identities=10% Similarity=-0.015 Sum_probs=65.6
Q ss_pred ccCeEEEEEecCCCc-eEEEecC-CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEE-eCCCeEEEEEcc
Q 017296 252 LEPVLCLSIDESCNG-GISGGAD-QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATA-GWDRRVRIYNYR 328 (374)
Q Consensus 252 ~~~v~~~~~~~~~~~-~~s~s~D-~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~-~~dg~v~iwd~~ 328 (374)
......++++|.... +.+-... +.|...+++....... ..........++|+|+++.|.-+ ...++|..+|+.
T Consensus 158 l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~----~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~d 233 (349)
T 3v64_C 158 LEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII----ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 233 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEES----CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEE----EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 345577888874443 3444444 7788888765322111 11112346789999876665544 456889999986
Q ss_pred CCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 329 KGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 329 ~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
.......+.........+++ .++.+.++-...+.|...+
T Consensus 234 G~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 234 GSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp SCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEE
Confidence 43333333333445677777 4555666656666666655
No 288
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.95 E-value=1.3 Score=40.14 Aligned_cols=71 Identities=10% Similarity=0.143 Sum_probs=52.9
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEEccCCe------------EEEEecc------cCCceEEEEEeCC---CCEEEEE
Q 017296 300 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGS------------ALAILKY------HHATCNAVSFSSD---CKLMASA 358 (374)
Q Consensus 300 ~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~------------~~~~~~~------h~~~v~~v~~sp~---~~~las~ 358 (374)
.+..+..+|+|.+||..+ +.+|.|-.+-.+. +.+.+.- ....|..+.|||- +..|+.-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 467799999999999775 6799998876321 1122221 2467999999994 4578888
Q ss_pred eCCCcEEEecCCC
Q 017296 359 SEDSTVALWELYP 371 (374)
Q Consensus 359 s~D~~v~~W~~~~ 371 (374)
-.|++||+||+..
T Consensus 146 tsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 146 KEDDTITMFDILN 158 (452)
T ss_dssp ETTSCEEEEETTC
T ss_pred ecCCEEEEEEccc
Confidence 8999999999964
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.94 E-value=0.32 Score=47.75 Aligned_cols=141 Identities=9% Similarity=0.020 Sum_probs=77.1
Q ss_pred EEEecCCcEEEEeccCC---CCceeeeecCccCeEEEEEecCC-CceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCC
Q 017296 225 LAGYEDGSILVWDIRNP---GIPLTAMKVHLEPVLCLSIDESC-NGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPG 300 (374)
Q Consensus 225 ~~gs~dg~i~iwdl~~~---~~~~~~~~~h~~~v~~~~~~~~~-~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~ 300 (374)
++-...+.|+.+++... ......+.........|+++... ..+++-...+.|.+.+++..... .+ +......
T Consensus 422 ~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~-~l---~~~~~~~ 497 (699)
T 1n7d_A 422 WSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TL---FREQGSK 497 (699)
T ss_dssp ECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEE-EE---CCCSSCC
T ss_pred EEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceE-EE---EeCCCCC
Confidence 33445678888887531 11111111112234567787433 33445556788999988643211 11 1111223
Q ss_pred eEEEEECCCCCEEEEEeC--CCeEEEEEccCCeEEEEec-ccCCceEEEEEeCCCC-EEEEEeCCCcEEEecCC
Q 017296 301 ISGTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILK-YHHATCNAVSFSSDCK-LMASASEDSTVALWELY 370 (374)
Q Consensus 301 v~~~~~sp~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~-~las~s~D~~v~~W~~~ 370 (374)
...+++.|.+.+|+-+.+ .++|.++++. +.....+. ..-...+.|+|+|++. +.++-+..+.|..+++.
T Consensus 498 P~giavDp~~g~ly~td~~~~~~I~~~~~d-G~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~d 570 (699)
T 1n7d_A 498 PRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 570 (699)
T ss_dssp CCCEECCSSSSCCEECCCSSSCCEEBCCSS-SCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSS
T ss_pred cceEEEccCCCcEEEcccCCCCeEEEEeCC-CCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccC
Confidence 567899997665554443 2688887764 33232332 2234567899998755 55555666778877763
No 290
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.80 E-value=3.6 Score=36.90 Aligned_cols=140 Identities=9% Similarity=-0.026 Sum_probs=83.9
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCce-EEEecC-CeEEEEEcCCCCCeEEEEEeeecCCCC
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGAD-QKIVLYNLDHSTGSCVIKKEINLERPG 300 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~s~s~D-~~i~lwd~~~~~~~~~~~~~~~~~~~~ 300 (374)
.+++-...+.|.+.++.. ......+.........++++|....+ ++-... +.|...+++........ ......
T Consensus 173 lY~~d~~~~~I~~~~~dg-~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~----~~~~~~ 247 (386)
T 3v65_B 173 LYWTDSGTSRIEVANLDG-AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA----DTHLFW 247 (386)
T ss_dssp EEEEETTTTEEEECBTTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE----CSSCSC
T ss_pred EEEEcCCCCeEEEEeCCC-CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE----ECCCCC
Confidence 345556677888888753 22222233334567889999765444 444444 78888888754322221 111234
Q ss_pred eEEEEECCCCCEEE-EEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 301 ISGTSIRPDSKIAA-TAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 301 v~~~~~sp~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
...++|+|+++.|. +-...+.|..+|+........+.........+++ .++.++++-...+.|...+
T Consensus 248 PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 248 PNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred eeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 67899998766554 4445688999998643333333333445677787 4556666666677777666
No 291
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.70 E-value=1.2 Score=39.59 Aligned_cols=102 Identities=16% Similarity=0.167 Sum_probs=59.6
Q ss_pred cCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee---ecCCCCeEEEEECCC----CCEEEEEeC---C---
Q 017296 253 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI---NLERPGISGTSIRPD----SKIAATAGW---D--- 319 (374)
Q Consensus 253 ~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~----~~~l~s~~~---d--- 319 (374)
.....|++++++. ++.+..++.|++++.+ +. .....+ .....+...++|+|+ +.+.++-.. +
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d~~---G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLISPS---GK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEECSS---CE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEeCC---Cc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 3456788888876 5555667999988632 22 111111 112346889999997 444444332 3
Q ss_pred -CeEEEEEccCC-------eEE-EEecc-cCCceEEEEEeCCCCEEEEEe
Q 017296 320 -RRVRIYNYRKG-------SAL-AILKY-HHATCNAVSFSSDCKLMASAS 359 (374)
Q Consensus 320 -g~v~iwd~~~~-------~~~-~~~~~-h~~~v~~v~~sp~~~~las~s 359 (374)
..|..|+.... +.+ ..+.. .......++|.|||.+.++.+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 67888887543 111 12221 112346789999999777754
No 292
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=93.70 E-value=2.7 Score=38.32 Aligned_cols=144 Identities=10% Similarity=0.083 Sum_probs=82.8
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeec-CccCeEEEEEecCCCc-eEEEecCCeEEEEEcCCCCCeE----EEEEeee--
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKV-HLEPVLCLSIDESCNG-GISGGADQKIVLYNLDHSTGSC----VIKKEIN-- 295 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~-h~~~v~~~~~~~~~~~-~~s~s~D~~i~lwd~~~~~~~~----~~~~~~~-- 295 (374)
+++-..++.|..||+..... ...... .......+++++++.. +++-...+.|..++.+..++.. .+.....
T Consensus 241 yv~d~~~~~V~~~~~~~~~~-~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~ 319 (430)
T 3tc9_A 241 YFNSWNAGQVFRYDFTTQET-TPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAK 319 (430)
T ss_dssp EEEETTTTEEEEEETTTTEE-EEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCB
T ss_pred EEEECCCCEEEEEECCCCcE-EEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCC
Confidence 44445667888888753211 111111 1234678999999984 4555677899998876543321 1111100
Q ss_pred c---------CCCCeE-EEEEC--------CCCCEEEEEeCCCeEEEEEccCCeEEEEeccc------------------
Q 017296 296 L---------ERPGIS-GTSIR--------PDSKIAATAGWDRRVRIYNYRKGSALAILKYH------------------ 339 (374)
Q Consensus 296 ~---------~~~~v~-~~~~s--------p~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h------------------ 339 (374)
. .-..-. .+++. +++.+.++-...+.|+.++. +++.. ++.+.
T Consensus 320 g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~v~-~~~g~g~~~~~G~~dG~~~~~~~ 397 (430)
T 3tc9_A 320 DWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGRVT-TFAGRGSNGTSGYNDGDLRQEAR 397 (430)
T ss_dssp CCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSEEE-EEEECCTTSSSSCBCEETTTTCB
T ss_pred CCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCcEE-EEEeCCCCCCCcccCCCchhhcE
Confidence 0 001122 45553 44666666666788999883 56533 33221
Q ss_pred CCceEEEEEeC-CCCEEEEEeCCCcEEEecCC
Q 017296 340 HATCNAVSFSS-DCKLMASASEDSTVALWELY 370 (374)
Q Consensus 340 ~~~v~~v~~sp-~~~~las~s~D~~v~~W~~~ 370 (374)
-.....|++.| +|.++++-.....|+..+.+
T Consensus 398 ~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 398 FNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp CSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred eCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 12578999999 57777777777888887654
No 293
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=92.75 E-value=5.6 Score=36.13 Aligned_cols=135 Identities=11% Similarity=0.150 Sum_probs=84.6
Q ss_pred cCCcEEEEeccCCCCceeeeecC----ccCeEEEEEecCCCceEEEecCCeEEEEEcCCCC-C---------eEEEEEee
Q 017296 229 EDGSILVWDIRNPGIPLTAMKVH----LEPVLCLSIDESCNGGISGGADQKIVLYNLDHST-G---------SCVIKKEI 294 (374)
Q Consensus 229 ~dg~i~iwdl~~~~~~~~~~~~h----~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~-~---------~~~~~~~~ 294 (374)
.++.||.-++.... ..+.++.. ...+..+..+|++..++.. .+.+|.+-.+.... . .......+
T Consensus 39 ~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l 116 (452)
T 3pbp_A 39 QDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSI 116 (452)
T ss_dssp ETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEG
T ss_pred ECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCcccccccccceeEEEc
Confidence 35788888876322 34444332 3367789999999866555 56678887776211 0 01111111
Q ss_pred ec----CCCCeEEEEECCC---CCEEEEEeCCCeEEEEEccCC--eEEEEec---------ccCCceEEEEEeCCCCE--
Q 017296 295 NL----ERPGISGTSIRPD---SKIAATAGWDRRVRIYNYRKG--SALAILK---------YHHATCNAVSFSSDCKL-- 354 (374)
Q Consensus 295 ~~----~~~~v~~~~~sp~---~~~l~s~~~dg~v~iwd~~~~--~~~~~~~---------~h~~~v~~v~~sp~~~~-- 354 (374)
.. ....|..+.|||- +..|+.=..|++||+||+... ++. .+. .....|.+++|.+++-.
T Consensus 117 ~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLY 195 (452)
T 3pbp_A 117 DEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLY 195 (452)
T ss_dssp GGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEE
T ss_pred CCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEE
Confidence 11 2457999999994 557888889999999999752 222 222 23357889999998774
Q ss_pred EEEEeCCCcEEE
Q 017296 355 MASASEDSTVAL 366 (374)
Q Consensus 355 las~s~D~~v~~ 366 (374)
+++.++.|-|+-
T Consensus 196 vl~~t~~GDIYA 207 (452)
T 3pbp_A 196 CLNTTEGGDIFA 207 (452)
T ss_dssp EEECTTSCEEEE
T ss_pred EEecCCCCCEEE
Confidence 444557777654
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=92.56 E-value=6.6 Score=36.50 Aligned_cols=139 Identities=9% Similarity=0.051 Sum_probs=80.3
Q ss_pred EEEE-ecCCcEEEEeccCCCCceeeeec----CccCeEEEEE-------ecCCCceEEEecCC-------eEEEEEcCCC
Q 017296 224 VLAG-YEDGSILVWDIRNPGIPLTAMKV----HLEPVLCLSI-------DESCNGGISGGADQ-------KIVLYNLDHS 284 (374)
Q Consensus 224 ~~~g-s~dg~i~iwdl~~~~~~~~~~~~----h~~~v~~~~~-------~~~~~~~~s~s~D~-------~i~lwd~~~~ 284 (374)
|+.+ ...+.|++.|++.. .+..+.. .......++| ++++..++.+...+ .|.+.+.+.
T Consensus 154 Lyv~~~~~~~i~~ID~~~~--~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~- 230 (496)
T 3kya_A 154 LYICYDGHKAIQLIDLKNR--MLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNA- 230 (496)
T ss_dssp EEEEEETEEEEEEEETTTT--EEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCT-
T ss_pred EEEEECCCCeEEEEECCCC--EEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCC-
Confidence 4444 33467888888642 2333321 2235788999 98888666555443 244554222
Q ss_pred CCeE------EEEEeeecCCCCeEEEEECCC-CCEEEEEeCCCeEEEEEcc-------CCeE-----------EEEe-c-
Q 017296 285 TGSC------VIKKEINLERPGISGTSIRPD-SKIAATAGWDRRVRIYNYR-------KGSA-----------LAIL-K- 337 (374)
Q Consensus 285 ~~~~------~~~~~~~~~~~~v~~~~~sp~-~~~l~s~~~dg~v~iwd~~-------~~~~-----------~~~~-~- 337 (374)
.+.. ...... .....++++|+ +.++++-..++.|..+|+. ++.. +..+ .
T Consensus 231 ~G~~~~~~~~~~v~~~----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~ 306 (496)
T 3kya_A 231 DGTFDDRSDIQLIAAY----KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI 306 (496)
T ss_dssp TSCCSTTSCEEEEEEE----SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC
T ss_pred CCceeecccceeeccC----CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec
Confidence 1111 111122 13457889995 5555666678899999997 4543 1121 1
Q ss_pred ccCCceEEEEEeCCCCE-EEEEeCCCcEEEecC
Q 017296 338 YHHATCNAVSFSSDCKL-MASASEDSTVALWEL 369 (374)
Q Consensus 338 ~h~~~v~~v~~sp~~~~-las~s~D~~v~~W~~ 369 (374)
........++|+|+|++ .++=+....|+.++.
T Consensus 307 ~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 307 ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 12234678999999994 555566777777553
No 295
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.48 E-value=3 Score=36.93 Aligned_cols=132 Identities=14% Similarity=0.100 Sum_probs=68.9
Q ss_pred EEEEecCCcEEEEeccCCCCceeeee---cCccCeEEEEEecC---CCce-EEEec---C----CeEEEEEcCCCCCeE-
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMK---VHLEPVLCLSIDES---CNGG-ISGGA---D----QKIVLYNLDHSTGSC- 288 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~---~h~~~v~~~~~~~~---~~~~-~s~s~---D----~~i~lwd~~~~~~~~- 288 (374)
++.+..+|.|+++|.. ....+..+. ........|+++|+ ...+ ++-+. + +.|..|+.+......
T Consensus 42 l~V~e~~g~I~~~d~~-G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~ 120 (354)
T 3a9g_A 42 YLVTERPGRLVLISPS-GKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLK 120 (354)
T ss_dssp EEEEETTTEEEEECSS-CEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEE
T ss_pred EEEEeCCCEEEEEeCC-CceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcC
Confidence 5555666888888732 111121111 12345788999986 3334 33332 3 567777765432111
Q ss_pred ---EEEEeee-cCCCCeEEEEECCCCCEEEEEeC-------------CCeEEEEEccCCe--------EEEEe-cccCCc
Q 017296 289 ---VIKKEIN-LERPGISGTSIRPDSKIAATAGW-------------DRRVRIYNYRKGS--------ALAIL-KYHHAT 342 (374)
Q Consensus 289 ---~~~~~~~-~~~~~v~~~~~sp~~~~l~s~~~-------------dg~v~iwd~~~~~--------~~~~~-~~h~~~ 342 (374)
.+...+. ...+....++|.|||.+.++.+. .|+|..++.. ++ ....+ .+|. .
T Consensus 121 ~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~d-G~~p~~npf~~~~i~a~G~r-n 198 (354)
T 3a9g_A 121 EVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEE-GRPPADNPFPNSPIWSYGHR-N 198 (354)
T ss_dssp EEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTT-SCCCTTSSSTTCCEEEECCS-C
T ss_pred ccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCC-CCCCCCCCCCCCcEEEEccC-C
Confidence 1111111 11223467999999987776543 2566666653 32 01111 2333 4
Q ss_pred eEEEEEeC-CCCEEEEE
Q 017296 343 CNAVSFSS-DCKLMASA 358 (374)
Q Consensus 343 v~~v~~sp-~~~~las~ 358 (374)
...++|.| +|++.++-
T Consensus 199 p~Gla~d~~~g~l~v~d 215 (354)
T 3a9g_A 199 PQGIDWHRASGVMVATE 215 (354)
T ss_dssp CCEEEECTTTCCEEEEE
T ss_pred cceEEEeCCCCCEEEEe
Confidence 56799999 67766553
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=92.39 E-value=5.1 Score=34.80 Aligned_cols=141 Identities=14% Similarity=0.031 Sum_probs=81.5
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEe--cCCeEEEEEcCCCCCeEEEEEeeecCCCCe
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG--ADQKIVLYNLDHSTGSCVIKKEINLERPGI 301 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v 301 (374)
+++-...+.|.++++.. ................+++++....++-+. ..+.|...+++........ ...-..-
T Consensus 94 y~~d~~~~~I~~~~~dG-~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~----~~~l~~P 168 (318)
T 3sov_A 94 YWTDSETNRIEVSNLDG-SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII----NSEIYWP 168 (318)
T ss_dssp EEEETTTTEEEEEETTS-CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE----CSSCSCE
T ss_pred EEEECCCCEEEEEECCC-CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE----ECCCCCc
Confidence 44445667888888753 222222223445678899997544444333 3578888888654322211 1112345
Q ss_pred EEEEECCCCCEEE-EEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEecCC
Q 017296 302 SGTSIRPDSKIAA-TAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 302 ~~~~~sp~~~~l~-s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~ 370 (374)
..++|+|+++.|. +-...+.|..+|+..........+.......+++. .+.++.+-...+.|...+..
T Consensus 169 nglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 169 NGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred cEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECC
Confidence 7899999766555 44456889999986433222223233455677764 34555666666777776654
No 297
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.76 E-value=5.3 Score=36.74 Aligned_cols=105 Identities=19% Similarity=0.214 Sum_probs=58.3
Q ss_pred CeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeee------cCCCCeEEEEECCC----CCEEEEEeC-----
Q 017296 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEIN------LERPGISGTSIRPD----SKIAATAGW----- 318 (374)
Q Consensus 254 ~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~------~~~~~v~~~~~sp~----~~~l~s~~~----- 318 (374)
....|+|++++..+++....+.|++++... +.......+. ....++..++|+|+ +.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~--g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPES--GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTT--CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCC--CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 455788999987555543334688876532 2222111111 12356789999995 444444332
Q ss_pred -------CCeEEEEEccCC-------eEEE-Eecc-cCCceEEEEEeCCCCEEEEEeC
Q 017296 319 -------DRRVRIYNYRKG-------SALA-ILKY-HHATCNAVSFSSDCKLMASASE 360 (374)
Q Consensus 319 -------dg~v~iwd~~~~-------~~~~-~~~~-h~~~v~~v~~sp~~~~las~s~ 360 (374)
...|..|+.... +.+. .+.. .......|+|.|||++.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235666665432 1121 2221 1234788999999997776543
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=91.61 E-value=10 Score=36.50 Aligned_cols=141 Identities=13% Similarity=0.044 Sum_probs=81.0
Q ss_pred EEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCC-ceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEE
Q 017296 225 LAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISG 303 (374)
Q Consensus 225 ~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~ 303 (374)
.+-...+.|..+++.........+.........+++|..+. .+++-...+.|.+.++++.....+.. ........
T Consensus 56 ~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~----~~l~~P~~ 131 (619)
T 3s94_A 56 WSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFW----QELDQPRA 131 (619)
T ss_dssp EEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC----SSCSCCCC
T ss_pred EEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEe----CCCCCCce
Confidence 33344566777776532111222222335678899998444 44566678899999997643332221 12234568
Q ss_pred EEECCCCCEEEEEeC--CCeEEEEEccCCeEEEEe-cccCCceEEEEEeCCCCEE-EEEeCCCcEEEecCC
Q 017296 304 TSIRPDSKIAATAGW--DRRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLM-ASASEDSTVALWELY 370 (374)
Q Consensus 304 ~~~sp~~~~l~s~~~--dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~l-as~s~D~~v~~W~~~ 370 (374)
+++.|...+|.-+.+ .+.|...++. |+...++ ...-...+.|++.++++.| ++=+..+.|...++.
T Consensus 132 Iavdp~~g~ly~tD~g~~~~I~r~~~d-G~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~d 201 (619)
T 3s94_A 132 IALDPSSGFMYWTDWGEVPKIERAGMD-GSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 201 (619)
T ss_dssp EEEETTTTEEEEEECSSSCEEEEEETT-SCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSS
T ss_pred EEEecCCCeEEEeccCCCCEEEEEECC-CCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCC
Confidence 999997666655554 4677777764 3333333 3344578899999875544 444556667666653
No 299
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=91.33 E-value=3.1 Score=40.77 Aligned_cols=140 Identities=11% Similarity=-0.040 Sum_probs=76.0
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEe-cC-CeEEEEEcCCCCCeEEEEEeeecCCCCe
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGG-AD-QKIVLYNLDHSTGSCVIKKEINLERPGI 301 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s-~D-~~i~lwd~~~~~~~~~~~~~~~~~~~~v 301 (374)
+++-...+.|.++++.. ......+.........+++++....++.+. .. +.|...+++........ .......
T Consensus 468 Y~tD~~~~~I~v~d~dg-~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~----~~~l~~P 542 (699)
T 1n7d_A 468 YWTDSVLGTVSVADTKG-VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV----TENIQWP 542 (699)
T ss_dssp EECCTTTSCEEEEBSSS-CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEES----CSSCSSC
T ss_pred EEEeccCCeEEEEecCC-CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEE----eCCCCCc
Confidence 44445678899998753 222222222234556788887544444332 23 67888777643222111 1111235
Q ss_pred EEEEECCCCCEE-EEEeCCCeEEEEEccCCeEEEEecc--cCCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 302 SGTSIRPDSKIA-ATAGWDRRVRIYNYRKGSALAILKY--HHATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 302 ~~~~~sp~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~--h~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
..++|+|+++.| ++-...++|.++++........+.. .......|++..+ .++++....+.|..++.
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 679999975544 4555678899999864332222221 1123344555443 45666666777877764
No 300
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=90.96 E-value=9.3 Score=36.71 Aligned_cols=128 Identities=13% Similarity=-0.030 Sum_probs=71.9
Q ss_pred EEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCce-EEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEE
Q 017296 226 AGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGT 304 (374)
Q Consensus 226 ~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~ 304 (374)
.-.+.+.|+..|+.........+.........+.+++....+ ++-...+.|..++++....... ...........+
T Consensus 13 ~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~---v~~~~~~~P~Gl 89 (619)
T 3s94_A 13 LYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQN---VVVSGLLSPDGL 89 (619)
T ss_dssp EEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEE---EECSSCSCEEEE
T ss_pred EEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEE---EEeCCCCCcCeE
Confidence 344577899998864321122222334567788998755444 4555578898888865321111 112222357789
Q ss_pred EECCCCC-EEEEEeCCCeEEEEEccCCeEEEEe-cccCCceEEEEEeCCCCEEEE
Q 017296 305 SIRPDSK-IAATAGWDRRVRIYNYRKGSALAIL-KYHHATCNAVSFSSDCKLMAS 357 (374)
Q Consensus 305 ~~sp~~~-~l~s~~~dg~v~iwd~~~~~~~~~~-~~h~~~v~~v~~sp~~~~las 357 (374)
++.+.++ +..+-...+.|.+.++.. +...++ ...-.....|++.|.+.+|.-
T Consensus 90 AvD~~~~~ly~~d~~~~~I~v~~~dG-~~~~~l~~~~l~~P~~Iavdp~~g~ly~ 143 (619)
T 3s94_A 90 ACDWLGEKLYWTDSETNRIEVSNLDG-SLRKVLFWQELDQPRAIALDPSSGFMYW 143 (619)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTS-CSCEEEECSSCSCCCCEEEETTTTEEEE
T ss_pred EEEecCCEEEEEeCCCCEEEEEECCC-CCEEEEEeCCCCCCceEEEecCCCeEEE
Confidence 9999555 445555678999999864 333333 234456778899987554433
No 301
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=90.77 E-value=14 Score=36.52 Aligned_cols=139 Identities=14% Similarity=0.084 Sum_probs=83.1
Q ss_pred EEEEEecCCcEEEEeccCCCCceeee----ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCC
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAM----KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLER 298 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~----~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~ 298 (374)
.+-.|+.++.|..||.... ....+ ......|.++..++++. +..|..++.+..+|.+. ++...........
T Consensus 375 ~lWigt~~~Gl~~~~~~~~--~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~--~~~~~~~~~~~~~ 449 (781)
T 3v9f_A 375 KLWIGTDGGGINVFENGKR--VAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRL--KKFQIIELEKNEL 449 (781)
T ss_dssp CEEEEEBSSCEEEEETTEE--EEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSS--CEEEECCSTTTCC
T ss_pred CEEEEeCCCcEEEEECCCC--eEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCC--CcEEEeccCCCCC
Confidence 3677887788999987531 11111 12345688888887764 56677777788887643 2222111001123
Q ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEeccc-----CCceEEEEEeCCCCEEEEEeCCCcEEEecC
Q 017296 299 PGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKYH-----HATCNAVSFSSDCKLMASASEDSTVALWEL 369 (374)
Q Consensus 299 ~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h-----~~~v~~v~~sp~~~~las~s~D~~v~~W~~ 369 (374)
..|.++...+++.+.+. +. +-+.++|..+++........ ...|.++...++|++.+....+| +..++.
T Consensus 450 ~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~ 522 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTP 522 (781)
T ss_dssp CCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECT
T ss_pred CeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeC
Confidence 46888888988876664 44 56888998776543222111 35788998888888655443344 444543
No 302
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=89.57 E-value=3.2 Score=34.08 Aligned_cols=104 Identities=11% Similarity=-0.008 Sum_probs=59.9
Q ss_pred cCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeE-E---EEEeeecC-CCCeEEEEECCCCCEEEEEeCCCeEEEEEc
Q 017296 253 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSC-V---IKKEINLE-RPGISGTSIRPDSKIAATAGWDRRVRIYNY 327 (374)
Q Consensus 253 ~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~-~---~~~~~~~~-~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~ 327 (374)
..+..++|+|++.. ... .+|. ||..+..+... . ....+... -....++.|.|++.+.++ .||.|..++-
T Consensus 41 ~~~~~laf~P~G~L-YaV-~~G~--Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSPGGEL-YGV-LNDK--IYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECTTSCE-EEE-ETTE--EEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECCCccE-EEE-eCCe--EEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 36668999998764 444 6664 55544322100 0 00111110 012467899999988777 5799988865
Q ss_pred cCC-eE------EEEecccCCceEEEEEeCCCCEEEEEeCCCcE
Q 017296 328 RKG-SA------LAILKYHHATCNAVSFSSDCKLMASASEDSTV 364 (374)
Q Consensus 328 ~~~-~~------~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 364 (374)
-+. .. -..-+.--..+..|.|.|+|.+-|.. |+.+
T Consensus 115 P~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~l 156 (236)
T 1tl2_A 115 PQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQF 156 (236)
T ss_dssp CCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEE
T ss_pred CcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcE
Confidence 321 11 11112222567999999999977766 6664
No 303
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=89.56 E-value=10 Score=33.36 Aligned_cols=105 Identities=16% Similarity=0.139 Sum_probs=61.1
Q ss_pred cCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEee----ecCCCCeEEEEECCC----CCEEEEE--eCCCeE
Q 017296 253 EPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEI----NLERPGISGTSIRPD----SKIAATA--GWDRRV 322 (374)
Q Consensus 253 ~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~----~~~~~~v~~~~~sp~----~~~l~s~--~~dg~v 322 (374)
.....|+|.+++..+++--..|.|++++.+. +.......+ .....+...++|+|+ +.+.++- ..++.|
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~--g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKT--GRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTT--CCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCC--CcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 4456788988887655554589999887543 222211111 122456889999995 4443432 245667
Q ss_pred EEEEccCC----------eEE-EEecc-cCCceEEEEEeCCCCEEEEEe
Q 017296 323 RIYNYRKG----------SAL-AILKY-HHATCNAVSFSSDCKLMASAS 359 (374)
Q Consensus 323 ~iwd~~~~----------~~~-~~~~~-h~~~v~~v~~sp~~~~las~s 359 (374)
..|.+..+ +.+ ..+.. .......|+|.|||.+.++.+
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 77766541 112 12321 112346689999999777754
No 304
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=89.15 E-value=18 Score=35.59 Aligned_cols=138 Identities=13% Similarity=0.106 Sum_probs=84.8
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeee----------cCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEE-E
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMK----------VHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVI-K 291 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~-~ 291 (374)
.+-.|+.++.|..|+..... +..+. .....|.++..++++. +..|..++.+..+|.... .... .
T Consensus 325 ~lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~--~~~~~~ 399 (781)
T 3v9f_A 325 NIWIGTWGGGINFISNAPPT--FHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKR--VAIYNK 399 (781)
T ss_dssp CEEEEEBSSCEEEECSSCCS--CEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEE--EEECC-
T ss_pred CEEEEecCCeEEEeCCCCCc--ceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCC--eEEEcc
Confidence 36678888889999876432 22221 1235689998888764 677777777888876421 1110 0
Q ss_pred EeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEecc---cCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 292 KEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAILKY---HHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 292 ~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~---h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
.........|.++...+++.+.+ |+.++-+..+|..+++.. .+.. ....|.++...++|++.+.. .. -+..++
T Consensus 400 ~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~ 475 (781)
T 3v9f_A 400 ENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWIGT-HA-GVFVID 475 (781)
T ss_dssp ----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEEEE-TT-EEEEEE
T ss_pred CCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEEEE-CC-ceEEEe
Confidence 00011234688888888887666 666677888888766533 3321 34678888888888755543 34 455665
Q ss_pred C
Q 017296 369 L 369 (374)
Q Consensus 369 ~ 369 (374)
.
T Consensus 476 ~ 476 (781)
T 3v9f_A 476 L 476 (781)
T ss_dssp S
T ss_pred C
Confidence 4
No 305
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=88.12 E-value=17 Score=33.84 Aligned_cols=148 Identities=9% Similarity=0.042 Sum_probs=90.0
Q ss_pred EEEEEecCCcEEEEecc-------CCCC-----c-----eee-ee-cCccCeEEEEEecCCCc-eEEEecCCeEEEEEcC
Q 017296 223 NVLAGYEDGSILVWDIR-------NPGI-----P-----LTA-MK-VHLEPVLCLSIDESCNG-GISGGADQKIVLYNLD 282 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~-------~~~~-----~-----~~~-~~-~h~~~v~~~~~~~~~~~-~~s~s~D~~i~lwd~~ 282 (374)
++++-..++.|..+|+. .... + +.. +. +.......++|++++.. +++-...+.|+.++.+
T Consensus 261 LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 261 LYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 45566778889999986 3221 0 111 11 12334678999999984 4555677899998876
Q ss_pred CCCCeE----EEEEeee--c---------CCCCeE-EEEEC-------CCCCEEEEEeCCCeEEEEEccCCeEEEEeccc
Q 017296 283 HSTGSC----VIKKEIN--L---------ERPGIS-GTSIR-------PDSKIAATAGWDRRVRIYNYRKGSALAILKYH 339 (374)
Q Consensus 283 ~~~~~~----~~~~~~~--~---------~~~~v~-~~~~s-------p~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~h 339 (374)
...+.. .+..... . .-..-. .++.. +++.+.++=..+.+|+.++ .++. +.++.+.
T Consensus 341 g~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~ 418 (496)
T 3kya_A 341 EIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGR 418 (496)
T ss_dssp TTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEES
T ss_pred CCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecc
Confidence 544321 1111100 0 001123 45554 4566667666788999998 4554 4344321
Q ss_pred ------------------------CCceEEEEEeCC-CCEEEEEeCCCcEEEecCCCC
Q 017296 340 ------------------------HATCNAVSFSSD-CKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 340 ------------------------~~~v~~v~~sp~-~~~las~s~D~~v~~W~~~~~ 372 (374)
-.....|++.++ |.++++=+....||.+++...
T Consensus 419 g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 419 GASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp CTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred cccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 134678999996 887777778889999887654
No 306
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=87.99 E-value=5.6 Score=35.12 Aligned_cols=107 Identities=9% Similarity=0.073 Sum_probs=57.4
Q ss_pred CeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEE-EEee-ecCCCCeEEEEECCC----CCEEEEEeC-------CC
Q 017296 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVI-KKEI-NLERPGISGTSIRPD----SKIAATAGW-------DR 320 (374)
Q Consensus 254 ~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~-~~~~-~~~~~~v~~~~~sp~----~~~l~s~~~-------dg 320 (374)
....|+|++++..++.+...|.|++++.+........ .... .....+...++|+|+ +.+.++-.. ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 4567889998873455566789998875321000000 0001 112346789999995 444444332 23
Q ss_pred eEEEEEccCC--e--EEEE----ecc---cCCceEEEEEeCCCCEEEEEeC
Q 017296 321 RVRIYNYRKG--S--ALAI----LKY---HHATCNAVSFSSDCKLMASASE 360 (374)
Q Consensus 321 ~v~iwd~~~~--~--~~~~----~~~---h~~~v~~v~~sp~~~~las~s~ 360 (374)
.|..|++... + ...+ +.. .......++|.|||.+.++.+.
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 5766766432 1 1111 111 1112457999999987666543
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=87.93 E-value=12 Score=32.97 Aligned_cols=133 Identities=10% Similarity=0.054 Sum_probs=67.3
Q ss_pred EEEEecCCcEEEEeccCCC-Cceeee----ecCccCeEEEEEecC----CCceEEEec-------CCeEEEEEcCCCCCe
Q 017296 224 VLAGYEDGSILVWDIRNPG-IPLTAM----KVHLEPVLCLSIDES----CNGGISGGA-------DQKIVLYNLDHSTGS 287 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~-~~~~~~----~~h~~~v~~~~~~~~----~~~~~s~s~-------D~~i~lwd~~~~~~~ 287 (374)
++.+...|.|++++..... .++..+ .........++++|+ +...++-+. ...|..++++.....
T Consensus 32 l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~ 111 (353)
T 2g8s_A 32 MLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSK 111 (353)
T ss_dssp EEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSB
T ss_pred EEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCC
Confidence 4455567888888742100 011111 112335678999874 333333222 235666666543222
Q ss_pred EEEEE----eee---cCCCCeEEEEECCCCCEEEEEeC-------------CCeEEEEEccCCe-------------EEE
Q 017296 288 CVIKK----EIN---LERPGISGTSIRPDSKIAATAGW-------------DRRVRIYNYRKGS-------------ALA 334 (374)
Q Consensus 288 ~~~~~----~~~---~~~~~v~~~~~sp~~~~l~s~~~-------------dg~v~iwd~~~~~-------------~~~ 334 (374)
..... .+. ...+....++|.|||.+.++.+. .|+|..+|.. ++ ...
T Consensus 112 ~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d-G~~p~~npf~~~~~~~~~ 190 (353)
T 2g8s_A 112 VTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQ-GEIPDDNPFIKESGVRAE 190 (353)
T ss_dssp EEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETT-SCCCTTCTTTTSTTSCTT
T ss_pred CCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCC-CCCCCCCCCcCCCCCCcc
Confidence 11111 111 11122457999999977666543 2567777764 22 111
Q ss_pred EecccCCceEEEEEeC-CCCEEEE
Q 017296 335 ILKYHHATCNAVSFSS-DCKLMAS 357 (374)
Q Consensus 335 ~~~~h~~~v~~v~~sp-~~~~las 357 (374)
.+..-......++|.| +|++.++
T Consensus 191 i~a~G~rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 191 IWSYGIRNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp EEEECCSEEEEEEEETTTTEEEEE
T ss_pred EEEEcCcCccceEEECCCCCEEEE
Confidence 2221223577899999 6775554
No 308
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=87.80 E-value=16 Score=33.42 Aligned_cols=119 Identities=22% Similarity=0.201 Sum_probs=64.3
Q ss_pred ccCeEEEEEecC---CCce-EEEec------------CCeEEEEEcCCCCCeE-----EEEEeeecCCCCeEEEEECCCC
Q 017296 252 LEPVLCLSIDES---CNGG-ISGGA------------DQKIVLYNLDHSTGSC-----VIKKEINLERPGISGTSIRPDS 310 (374)
Q Consensus 252 ~~~v~~~~~~~~---~~~~-~s~s~------------D~~i~lwd~~~~~~~~-----~~~~~~~~~~~~v~~~~~sp~~ 310 (374)
...+..|+++|+ ...+ ++-+. ...|..++++...... ++........+....++|.|||
T Consensus 76 ~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG 155 (454)
T 1cru_A 76 QNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ 155 (454)
T ss_dssp SCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS
T ss_pred CCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC
Confidence 345778999984 3333 33322 2356666654332221 1111111223457889999999
Q ss_pred CEEEEEeCC--------------------------------CeEEEEEccCCe-----------EEEEecccCCceEEEE
Q 017296 311 KIAATAGWD--------------------------------RRVRIYNYRKGS-----------ALAILKYHHATCNAVS 347 (374)
Q Consensus 311 ~~l~s~~~d--------------------------------g~v~iwd~~~~~-----------~~~~~~~h~~~v~~v~ 347 (374)
.+.++.+.. |+|...+.. ++ ....+..-......++
T Consensus 156 ~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~d-G~ip~~Npf~~~~~~ei~a~G~RNp~gla 234 (454)
T 1cru_A 156 KIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLD-GSIPKDNPSFNGVVSHIYTLGHRNPQGLA 234 (454)
T ss_dssp CEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTT-SCCCTTCCEETTEECSEEEBCCSEEEEEE
T ss_pred eEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCC-CCCCCCCCCCCCCcceEEEECCCCcceEE
Confidence 987765532 445555442 33 1222322224577899
Q ss_pred EeCCCCEEEE-EeCCCcEEEecCCC
Q 017296 348 FSSDCKLMAS-ASEDSTVALWELYP 371 (374)
Q Consensus 348 ~sp~~~~las-~s~D~~v~~W~~~~ 371 (374)
|.|+|++.++ .+.|+.-+|.-+.+
T Consensus 235 ~dp~G~L~~~d~g~~~~dein~i~~ 259 (454)
T 1cru_A 235 FTPNGKLLQSEQGPNSDDEINLIVK 259 (454)
T ss_dssp ECTTSCEEEEEECSSSCEEEEECCT
T ss_pred ECCCCCEEEEecCCCCCeEEEEecC
Confidence 9999885554 46666666655443
No 309
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=87.74 E-value=14 Score=34.01 Aligned_cols=109 Identities=8% Similarity=0.041 Sum_probs=60.3
Q ss_pred CeEEEEEecCCC-ceEEEecCCeEEEEEcCCCCC-eEEE-EEe-ee-----cCCCCeEEEEECCC----CCEEEEEeC--
Q 017296 254 PVLCLSIDESCN-GGISGGADQKIVLYNLDHSTG-SCVI-KKE-IN-----LERPGISGTSIRPD----SKIAATAGW-- 318 (374)
Q Consensus 254 ~v~~~~~~~~~~-~~~s~s~D~~i~lwd~~~~~~-~~~~-~~~-~~-----~~~~~v~~~~~sp~----~~~l~s~~~-- 318 (374)
....|+|.|++. .++.+...|.|++++.+.... .... ... .. ....++..++|+|+ +.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 445678888874 356667889999997543210 1111 000 10 11357889999996 444444332
Q ss_pred C----------CeEEEEEccC----------CeEEEEec--ccCCceEEEEEeCCCCEEEEEeCCC
Q 017296 319 D----------RRVRIYNYRK----------GSALAILK--YHHATCNAVSFSSDCKLMASASEDS 362 (374)
Q Consensus 319 d----------g~v~iwd~~~----------~~~~~~~~--~h~~~v~~v~~sp~~~~las~s~D~ 362 (374)
+ ..|..|.+.. .+.+..+. ........|+|.|||++.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 1455566542 12232322 1122467899999999777766443
No 310
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=87.59 E-value=21 Score=34.35 Aligned_cols=137 Identities=9% Similarity=-0.027 Sum_probs=79.8
Q ss_pred ecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCCce-EEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEE
Q 017296 228 YEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGG-ISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSI 306 (374)
Q Consensus 228 s~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~-~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 306 (374)
+..+.|+..|+...................++|++....+ ++-..++.|..++++........ .........+++
T Consensus 12 s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~----~~g~~~P~GlAv 87 (628)
T 4a0p_A 12 SRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVV----EFGLDYPEGMAV 87 (628)
T ss_dssp EETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE----CSSCSCCCEEEE
T ss_pred EeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEE----eCCCCCcceEEE
Confidence 3678899999975332111111123467789999754444 56667889999988754322221 111124567899
Q ss_pred CCCCCEE-EEEeCCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEE-EEE-eCCCcEEEec
Q 017296 307 RPDSKIA-ATAGWDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASA-SEDSTVALWE 368 (374)
Q Consensus 307 sp~~~~l-~s~~~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-as~-s~D~~v~~W~ 368 (374)
.+.++.| .+-...+.|.+.++........+...-.....|++.|...+| +|- +..+.|...+
T Consensus 88 D~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~ 152 (628)
T 4a0p_A 88 DWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAA 152 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEe
Confidence 8765544 555567899999985433222232344567899999854444 442 2234444443
No 311
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=87.54 E-value=15 Score=32.54 Aligned_cols=126 Identities=13% Similarity=0.152 Sum_probs=72.5
Q ss_pred CCcEEEEeccCCCCcee---eeecC-ccCeEEEEEecCCCceEEEec---C------------CeEEEEEcCCCCCeEEE
Q 017296 230 DGSILVWDIRNPGIPLT---AMKVH-LEPVLCLSIDESCNGGISGGA---D------------QKIVLYNLDHSTGSCVI 290 (374)
Q Consensus 230 dg~i~iwdl~~~~~~~~---~~~~h-~~~v~~~~~~~~~~~~~s~s~---D------------~~i~lwd~~~~~~~~~~ 290 (374)
+.+|.+|++...+.... .+.+. ....+.+.+++++...++... | ..=++|-++..+.+..
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~- 216 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVV- 216 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEE-
T ss_pred CCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEe-
Confidence 57888988865333222 22221 245788888888764444331 1 2233444433322211
Q ss_pred EEeeecCCCCeEEEEECCCCCEEEEEe-CCCeEEEEEccC-CeE--EEEecccCCceEEEEEeC-CCCEEEEEeCC
Q 017296 291 KKEINLERPGISGTSIRPDSKIAATAG-WDRRVRIYNYRK-GSA--LAILKYHHATCNAVSFSS-DCKLMASASED 361 (374)
Q Consensus 291 ~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~v~iwd~~~-~~~--~~~~~~h~~~v~~v~~sp-~~~~las~s~D 361 (374)
...+ ...+.++||||+++|..+. ..++|..|++.. ++. ...+ .-....-.+++.+ +|.+.+++..+
T Consensus 217 ~~~l----~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 217 AEGF----DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEE----SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESC
T ss_pred ecCC----cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCC
Confidence 1111 3467899999998776554 578999999863 332 1233 2245667788888 58877766544
No 312
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=86.93 E-value=16 Score=32.23 Aligned_cols=137 Identities=15% Similarity=0.150 Sum_probs=72.7
Q ss_pred EEEEec-CCcEEEEeccCCCC-ceeee----ecCccCeEEEEEecC----CCceE--EEecCCeEEEEEcCCCC------
Q 017296 224 VLAGYE-DGSILVWDIRNPGI-PLTAM----KVHLEPVLCLSIDES----CNGGI--SGGADQKIVLYNLDHST------ 285 (374)
Q Consensus 224 ~~~gs~-dg~i~iwdl~~~~~-~~~~~----~~h~~~v~~~~~~~~----~~~~~--s~s~D~~i~lwd~~~~~------ 285 (374)
++.+.. .|.|++++...... .+..+ .........|+++|+ +...+ +...++.|.-|.++...
T Consensus 45 llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~ 124 (347)
T 3das_A 45 LLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQL 124 (347)
T ss_dssp EEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCB
T ss_pred EEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccC
Confidence 444444 78888887543211 11111 122456788999874 32222 22345677777665411
Q ss_pred --CeEEEEEeeecCCCCeEEEEECCCCCEEEEEeC-------------CCeEEEEEccCCe--------EEEEe-cccCC
Q 017296 286 --GSCVIKKEINLERPGISGTSIRPDSKIAATAGW-------------DRRVRIYNYRKGS--------ALAIL-KYHHA 341 (374)
Q Consensus 286 --~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~-------------dg~v~iwd~~~~~--------~~~~~-~~h~~ 341 (374)
...++........+....++|.|||.+.++.+. -|+|...+.. ++ ....+ .+|.
T Consensus 125 ~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~nPf~~~~i~a~G~R- 202 (347)
T 3das_A 125 GAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPGNPFPGSPVYSYGHR- 202 (347)
T ss_dssp CCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTTCSSTTCCEEEBCCS-
T ss_pred CCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCCCCCCCCeEEeeCCC-
Confidence 122222111122234567999999988777552 3566656553 22 01122 2444
Q ss_pred ceEEEEEeCCCCEEEEE-eCCC
Q 017296 342 TCNAVSFSSDCKLMASA-SEDS 362 (374)
Q Consensus 342 ~v~~v~~sp~~~~las~-s~D~ 362 (374)
....++|.|+|++.++= +.|+
T Consensus 203 Np~Gla~dp~G~L~~~d~g~~~ 224 (347)
T 3das_A 203 NVQGLAWDDKQRLFASEFGQDT 224 (347)
T ss_dssp BCCEEEECTTCCEEEEECCSSS
T ss_pred CcceEEECCCCCEEEEecCCCC
Confidence 45678999998866553 4444
No 313
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=86.37 E-value=16 Score=31.68 Aligned_cols=108 Identities=5% Similarity=0.011 Sum_probs=62.7
Q ss_pred CccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCC
Q 017296 251 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKG 330 (374)
Q Consensus 251 h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~ 330 (374)
+...+..+.+++++..++.+...+..+-+|-...+ ..... ......+..+.+.|++++++ ++.+|.+.+++...+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~t--W~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 161 AIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTA--WEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNS 235 (327)
T ss_dssp CCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSS--CEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEE
T ss_pred CCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCc--eeECC--CCCCCccceeEECCCCCEEE-EeCCceEEEecCCCC
Confidence 44568888888877655555433334444321122 11111 11234678889999987665 556888877643334
Q ss_pred eEEEEecc----cCCceEEEEEeCCCCEEEEEeCCCcE
Q 017296 331 SALAILKY----HHATCNAVSFSSDCKLMASASEDSTV 364 (374)
Q Consensus 331 ~~~~~~~~----h~~~v~~v~~sp~~~~las~s~D~~v 364 (374)
+....+.. +...+..+++.++++.++.+. ++.|
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i 272 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL 272 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE
T ss_pred CeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE
Confidence 44333321 223588899998888777654 6666
No 314
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=83.77 E-value=44 Score=34.73 Aligned_cols=111 Identities=13% Similarity=0.125 Sum_probs=66.4
Q ss_pred CeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCC------CCEEEEEeC-CCeEEEEE
Q 017296 254 PVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPD------SKIAATAGW-DRRVRIYN 326 (374)
Q Consensus 254 ~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~------~~~l~s~~~-dg~v~iwd 326 (374)
.|...+.... +++.++ .+.+..+.++.. .......... ...+.++++.|. ++++|.|.+ |++|+|+.
T Consensus 515 ~I~~As~n~~--~vvva~-g~~l~~fel~~~--~L~~~~~~~l-~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~s 588 (1158)
T 3ei3_A 515 NISVASCNSS--QVVVAV-GRALYYLQIHPQ--ELRQISHTEM-EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILK 588 (1158)
T ss_dssp CCCEEEECSS--EEEEEE-TTEEEEEEEETT--EEEEEEEEEC-SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEE
T ss_pred EEEEEEeCCC--EEEEEE-CCEEEEEEeeCC--ceeeecccCC-CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEE
Confidence 4655555432 344444 577888877642 2221122222 346899999863 468999998 99999999
Q ss_pred ccCCeEEEEecc-cCCceEEEEEe--CCCCEEEEEeCCCcEEEecCC
Q 017296 327 YRKGSALAILKY-HHATCNAVSFS--SDCKLMASASEDSTVALWELY 370 (374)
Q Consensus 327 ~~~~~~~~~~~~-h~~~v~~v~~s--p~~~~las~s~D~~v~~W~~~ 370 (374)
+.+.+.+....- -...+.++.+. ....+|..|=.||.+--+.++
T Consensus 589 L~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 589 LPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp TTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEEC
T ss_pred CCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEc
Confidence 987665543221 11233344332 223478888889987666554
No 315
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=83.65 E-value=45 Score=34.70 Aligned_cols=132 Identities=14% Similarity=0.165 Sum_probs=78.1
Q ss_pred CCcEEEEeccCCCCceeee--ecCccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEEC
Q 017296 230 DGSILVWDIRNPGIPLTAM--KVHLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIR 307 (374)
Q Consensus 230 dg~i~iwdl~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~s 307 (374)
.|.|.+|++... .+..+ +...+++++++--. + .+.++..+.+++|++..... ++.+.... ..+..+.+.
T Consensus 863 ~Gri~vf~v~~~--kL~lv~~~~v~g~v~al~~~~-g--~Lla~ig~~l~vy~l~~~~~---L~~~~~~~-~~i~~~~l~ 933 (1158)
T 3ei3_A 863 QGRIVVFQYSDG--KLQTVAEKEVKGAVYSMVEFN-G--KLLASINSTVRLYEWTTEKE---LRTECNHY-NNIMALYLK 933 (1158)
T ss_dssp CEEEEEEEEETT--EEEEEEEEEESSCEEEEEEET-T--EEEEEETTEEEEEEECTTSC---EEEEEEEC-CCSCEEEEE
T ss_pred ceEEEEEEEECC--EEEEEEEEEcCCcCEEEeeeC-C--EEEEEcCCEEEEEECCCCce---EEEEeecc-ccEEEEEEe
Confidence 488999998632 22222 22356788876532 2 24445668999999965421 12221111 112233333
Q ss_pred CCCCEEEEEeCCCeEEEEEccC-CeEEEEecc--cCCceEEEEEeCCCCEEEEEeCCCcEEEecCCC
Q 017296 308 PDSKIAATAGWDRRVRIYNYRK-GSALAILKY--HHATCNAVSFSSDCKLMASASEDSTVALWELYP 371 (374)
Q Consensus 308 p~~~~l~s~~~dg~v~iwd~~~-~~~~~~~~~--h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~ 371 (374)
-.+.+|+.|..-+.|.+...+. ...+..+.. ++..+.++.|-.+ ..++.+..++++.+....+
T Consensus 934 ~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 934 TKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EETTEEEEEESSBCEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEECT
T ss_pred ccCCEEEEEEhhheEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecCC
Confidence 3466888898888888765432 233434433 4567888888655 4667789999999887644
No 316
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=83.42 E-value=12 Score=30.61 Aligned_cols=110 Identities=15% Similarity=0.112 Sum_probs=59.9
Q ss_pred eEEEEEecCCCceEEEecCCeEEEEEcCCCCCe-EEEE-Eeeec-CCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCe
Q 017296 255 VLCLSIDESCNGGISGGADQKIVLYNLDHSTGS-CVIK-KEINL-ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGS 331 (374)
Q Consensus 255 v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~-~~~~-~~~~~-~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~ 331 (374)
-.++.||+++...++ .||.|.-++-...... ..-. ..+.. .=..+..+.|.|+|.+-+.. |+.+.-+..-...
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~ 165 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSN 165 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSST
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCC
Confidence 467888998864444 6798887764221111 1000 01100 01247889999999877766 7775432111110
Q ss_pred ------EEEEe-cccCCceEEEEEeCCCCEEEEEeCCCcEEEecCCCC
Q 017296 332 ------ALAIL-KYHHATCNAVSFSSDCKLMASASEDSTVALWELYPP 372 (374)
Q Consensus 332 ------~~~~~-~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~~~~~ 372 (374)
....+ +..-..-..+.|.|+|.+.+.. ++ +||...+|
T Consensus 166 ~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 166 QDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp TCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TT--EEEEESCC
T ss_pred CcccccccceeccCCcceEEEEEECCCCcEEEEe--CC--eEEecCCc
Confidence 01111 1233344557799999877655 66 66666655
No 317
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=81.64 E-value=8.7 Score=33.81 Aligned_cols=67 Identities=15% Similarity=0.125 Sum_probs=42.5
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEEccCCeE--EEEec---ccCCceEEEEEeCC----CCEEEEEeCC-----CcEE
Q 017296 300 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSA--LAILK---YHHATCNAVSFSSD----CKLMASASED-----STVA 365 (374)
Q Consensus 300 ~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~--~~~~~---~h~~~v~~v~~sp~----~~~las~s~D-----~~v~ 365 (374)
.-..++|.|++++++ +..+|.|++++ +++. +..+. ........|+|+|+ +.+.++-+.+ ..|.
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 356899999999666 45679999998 4442 22221 12357889999998 4444544432 4455
Q ss_pred EecC
Q 017296 366 LWEL 369 (374)
Q Consensus 366 ~W~~ 369 (374)
.++.
T Consensus 109 r~~~ 112 (352)
T 2ism_A 109 RLRH 112 (352)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 5554
No 318
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=76.21 E-value=56 Score=31.30 Aligned_cols=141 Identities=7% Similarity=0.019 Sum_probs=85.4
Q ss_pred EEEEecCCcEEEEeccCCCCceeeeecCccCeEEEEEecCCC-ceEEEecCCeEEEEEcCCCCCeEEEEEeeecCCCCeE
Q 017296 224 VLAGYEDGSILVWDIRNPGIPLTAMKVHLEPVLCLSIDESCN-GGISGGADQKIVLYNLDHSTGSCVIKKEINLERPGIS 302 (374)
Q Consensus 224 ~~~gs~dg~i~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~-~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~ 302 (374)
+.+-..++.|..+++... .....+.........+++|.... .+++-...+.|.+.++++........ .......
T Consensus 52 ywtD~~~~~I~r~~~~g~-~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~----~~l~~P~ 126 (628)
T 4a0p_A 52 YWTDISLKTISRAFMNGS-ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVW----KDLDSPR 126 (628)
T ss_dssp EEEETTTTEEEEEETTSC-SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEEC----SSCCCEE
T ss_pred EEEECCCCeEEEEECCCC-CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEe----CCCCCcc
Confidence 445566788888887532 22222222234567888986544 34566667899999987654322221 1223468
Q ss_pred EEEECCCCCEEEEEeC--CCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEE-EEEeCCCcEEEecCC
Q 017296 303 GTSIRPDSKIAATAGW--DRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLM-ASASEDSTVALWELY 370 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l-as~s~D~~v~~W~~~ 370 (374)
.+++.|...+|.-+.+ .+.|...++.... ...+-..-...+.|++.++++.| ++=+..+.|...++.
T Consensus 127 ~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~-~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 127 ALALDPAEGFMYWTEWGGKPKIDRAAMDGSE-RTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp EEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cEEEccCCCeEEEeCCCCCCEEEEEeCCCCc-eEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 9999996556655553 5678888875433 33333345678899999976644 444556667766653
No 319
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=75.85 E-value=38 Score=29.15 Aligned_cols=110 Identities=8% Similarity=-0.035 Sum_probs=66.8
Q ss_pred CccCeEEEEEecCCCceEEEecCCeEEEEEcCCCCCeEEEEEeeec----CCCCeEEEEECCCCCEEEEEeCCCeEEEEE
Q 017296 251 HLEPVLCLSIDESCNGGISGGADQKIVLYNLDHSTGSCVIKKEINL----ERPGISGTSIRPDSKIAATAGWDRRVRIYN 326 (374)
Q Consensus 251 h~~~v~~~~~~~~~~~~~s~s~D~~i~lwd~~~~~~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd 326 (374)
....+..+.+++++. ++..+.+|.+.+.+.+. +. ... .+.. ....+..+.+.|++.+++.+ .++.+ ++.
T Consensus 203 ~~~~~~~~~~~~~g~-~~~~~~~G~~~~s~~D~--G~-tW~-~~~~~~~~~~~~~~~v~~~~~~~~~~~g-~~g~i-~~S 275 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGR-LWMIVNGGKIAFSDPDN--SE-NWG-ELLSPLRRNSVGFLDLAYRTPNEVWLAG-GAGAL-LCS 275 (327)
T ss_dssp SSSCEEEEEECTTSC-EEEEETTTEEEEEETTE--EE-EEC-CCBCTTSSCCSCEEEEEESSSSCEEEEE-STTCE-EEE
T ss_pred CCCccceeEECCCCC-EEEEeCCceEEEecCCC--CC-eeE-eccCCcccCCcceEEEEecCCCEEEEEe-CCCeE-EEe
Confidence 445778888887764 55666788877764221 11 111 1111 12357889999888777755 47877 444
Q ss_pred ccCCeEEEEecc---cCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 327 YRKGSALAILKY---HHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 327 ~~~~~~~~~~~~---h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
.+.++....+.. ....+.++.|.++++ ++.++.+|+|.-++
T Consensus 276 ~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 276 QDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp SSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred CCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 555655544442 345778899976555 55567788776554
No 320
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=73.57 E-value=49 Score=31.31 Aligned_cols=102 Identities=15% Similarity=0.016 Sum_probs=62.6
Q ss_pred eEEEEEecCCCceEEE-ecCCeEEEEEcCCC-----C----CeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCCeEEE
Q 017296 255 VLCLSIDESCNGGISG-GADQKIVLYNLDHS-----T----GSCVIKKEINLERPGISGTSIRPDSKIAATAGWDRRVRI 324 (374)
Q Consensus 255 v~~~~~~~~~~~~~s~-s~D~~i~lwd~~~~-----~----~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~v~i 324 (374)
...+.++|++.+++.+ -.+.++.++|++.- . ..-....+.. -..+-.-.+|.++|....|--.|..|.-
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 3345668888877554 45889999998631 0 0001112222 1245677899999954555557999999
Q ss_pred EEccCC----------eEEEEecccCCceEEEE------EeCCCCEEEEE
Q 017296 325 YNYRKG----------SALAILKYHHATCNAVS------FSSDCKLMASA 358 (374)
Q Consensus 325 wd~~~~----------~~~~~~~~h~~~v~~v~------~sp~~~~las~ 358 (374)
|++... ..+..+.-|-..- ++. -.|||++|++.
T Consensus 404 Wni~~a~~~~~g~~~~~v~~k~dv~YqpG-H~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 404 WNMEEAVRAYKGEKVNYIKQKLDVHYQPG-HLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp EEHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCSCEEEEE
T ss_pred EeccHHHHHhcCccCCeeeeccccccCCc-ccccCCCccCCCCccEEEEe
Confidence 999753 3455565555332 222 25788888875
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=73.11 E-value=41 Score=28.22 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=51.1
Q ss_pred CceEEEecC-----CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEEccCCeEEE
Q 017296 265 NGGISGGAD-----QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALA 334 (374)
Q Consensus 265 ~~~~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----g~v~iwd~~~~~~~~ 334 (374)
..++.|+.+ ..+..+|+... .+.....+...+.....+.+ ++++++.|+.+ ..+.+||..+.+-.
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~- 235 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHTG--HWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWT- 235 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTTT--EEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE-
T ss_pred EEEEECCCCCCcccceEEEEeCCCC--cEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEE-
Confidence 344556544 45777877543 33332222222222223333 57777878764 46889999776532
Q ss_pred Eecc-cCCceEEEEEeCCCCEEEEEeCCC-----cEEEecCC
Q 017296 335 ILKY-HHATCNAVSFSSDCKLMASASEDS-----TVALWELY 370 (374)
Q Consensus 335 ~~~~-h~~~v~~v~~sp~~~~las~s~D~-----~v~~W~~~ 370 (374)
.+.. ........+..-++++++.|+.++ .|.++|..
T Consensus 236 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 236 TVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETT
T ss_pred ECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCC
Confidence 2221 111111112223778778777653 45556553
No 322
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=70.91 E-value=54 Score=28.73 Aligned_cols=182 Identities=12% Similarity=0.171 Sum_probs=97.9
Q ss_pred ceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCC
Q 017296 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (374)
Q Consensus 162 ~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~ 241 (374)
+.+++-+ ..+++++|+++.+.+......+ . + .|+.=.+....-+++ +..|.-|++...
T Consensus 79 ~ViALra--g~~LQiFnletK~klks~~~~e-----------~-V-----vfWkWis~~~L~lVT---~taVyHWs~~~~ 136 (365)
T 2xzh_A 79 KVIALKA--GKTLQIFNIEMKSKMKAHTMTD-----------D-V-----TFWKWISLNTVALVT---DNAVYHWSMEGE 136 (365)
T ss_dssp SEEEEEE--TTEEEEEETTTTEEEEEEECSS-----------C-E-----EEEEECSSSEEEEEE---SSEEEEEESSTT
T ss_pred cEEEEec--CCeEEEechHHhhhhcceecCC-----------c-c-----EEEEecCCCeEEEEc---CCcEEEEcccCC
Confidence 4455544 3589999999987766554321 0 0 011001111112333 457899998765
Q ss_pred CCceeeeecCc----cCeEEEEEecCCCceEEEe-------cCCeEEEEEcCCCCC---------------------eEE
Q 017296 242 GIPLTAMKVHL----EPVLCLSIDESCNGGISGG-------ADQKIVLYNLDHSTG---------------------SCV 289 (374)
Q Consensus 242 ~~~~~~~~~h~----~~v~~~~~~~~~~~~~s~s-------~D~~i~lwd~~~~~~---------------------~~~ 289 (374)
..|...+..|. ..|..-..+++..+++-.| -.|.+.||+.+.... ..+
T Consensus 137 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~l 216 (365)
T 2xzh_A 137 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTL 216 (365)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEE
T ss_pred CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceE
Confidence 56666665553 3466666677777654322 236777777653210 000
Q ss_pred E-------------EEeeecC---------------------CCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEE
Q 017296 290 I-------------KKEINLE---------------------RPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAI 335 (374)
Q Consensus 290 ~-------------~~~~~~~---------------------~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~ 335 (374)
+ .-++... .+.--++.+|+--..+..-+.-|.+.++|++++.++..
T Consensus 217 f~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 217 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp EEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 0 0011111 11123344555455677778899999999999998876
Q ss_pred ecccCCceEEEEEeCCCCEEEEEeCCCcEE
Q 017296 336 LKYHHATCNAVSFSSDCKLMASASEDSTVA 365 (374)
Q Consensus 336 ~~~h~~~v~~v~~sp~~~~las~s~D~~v~ 365 (374)
-+--.+.|..-+-..+..=++.....|.|-
T Consensus 297 nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl 326 (365)
T 2xzh_A 297 NRISGETIFVTAPHEATAGIIGVNRKGQVL 326 (365)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEETTCEEE
T ss_pred eccCCCceEEecccCCCCcEEEEcCCCEEE
Confidence 655555665444433333333334555544
No 323
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=70.26 E-value=5.1 Score=40.74 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=31.8
Q ss_pred ceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeee
Q 017296 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS 56 (374)
Q Consensus 20 ~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~ 56 (374)
.|.+++..++..+|+|-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4567777888899999999999999999999887653
No 324
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=68.85 E-value=51 Score=27.60 Aligned_cols=101 Identities=17% Similarity=0.169 Sum_probs=50.9
Q ss_pred CceEEEecC-----CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEEccCCeEEE
Q 017296 265 NGGISGGAD-----QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALA 334 (374)
Q Consensus 265 ~~~~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----g~v~iwd~~~~~~~~ 334 (374)
..++.|+.+ ..+.++|+.. ..+.....+...+.....+.+ ++++++.|+.+ ..+.+||..+.+-.
T Consensus 114 ~lyv~GG~~~~~~~~~~~~~d~~~--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~- 188 (301)
T 2vpj_A 114 MIYVSGGFDGSRRHTSMERYDPNI--DQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWT- 188 (301)
T ss_dssp EEEEECCBCSSCBCCEEEEEETTT--TEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE-
T ss_pred EEEEEcccCCCcccceEEEEcCCC--CeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEE-
Confidence 344555543 3577777754 333333333222222223333 67777877765 45888998766422
Q ss_pred Eeccc-CCceEEEEEeCCCCEEEEEeCC-----CcEEEecCC
Q 017296 335 ILKYH-HATCNAVSFSSDCKLMASASED-----STVALWELY 370 (374)
Q Consensus 335 ~~~~h-~~~v~~v~~sp~~~~las~s~D-----~~v~~W~~~ 370 (374)
.+... .......+..-++++++.|+.+ ..+.+||+.
T Consensus 189 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 230 (301)
T 2vpj_A 189 NVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIR 230 (301)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred eCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCC
Confidence 22111 1111111222367777777764 356666654
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=64.53 E-value=62 Score=27.06 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=46.7
Q ss_pred CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEEccCCeEEEEecccC-CceEEEE
Q 017296 274 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALAILKYHH-ATCNAVS 347 (374)
Q Consensus 274 ~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~h~-~~v~~v~ 347 (374)
..+..||+.. ..+.....+...+.....+.+ ++++++.|+.+ ..+.+||..+.+-. .+.... ..-..-+
T Consensus 173 ~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~~~~r~~~~~ 247 (302)
T 2xn4_A 173 STVECYNATT--NEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWR-QVADMNMCRRNAGV 247 (302)
T ss_dssp CCEEEEETTT--TEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEE
T ss_pred cEEEEEeCCC--CcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEe-eCCCCCCccccCeE
Confidence 3577787754 333333222222222223333 57787888765 36888998775422 222111 1111112
Q ss_pred EeCCCCEEEEEeCCC-----cEEEecCC
Q 017296 348 FSSDCKLMASASEDS-----TVALWELY 370 (374)
Q Consensus 348 ~sp~~~~las~s~D~-----~v~~W~~~ 370 (374)
...++++++.|+.++ .|.++|..
T Consensus 248 ~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 248 CAVNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp EEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred EEECCEEEEECCcCCCcccccEEEEcCC
Confidence 223778888877654 36666653
No 326
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=64.13 E-value=6 Score=41.16 Aligned_cols=36 Identities=17% Similarity=0.263 Sum_probs=30.9
Q ss_pred ceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeee
Q 017296 20 SVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSS 55 (374)
Q Consensus 20 ~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~ 55 (374)
.|.+++..++..+|++-+.|+++|+||+.+++++.+
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 455667778889999999999999999999988765
No 327
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=63.57 E-value=11 Score=38.31 Aligned_cols=37 Identities=5% Similarity=0.160 Sum_probs=31.4
Q ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEe
Q 017296 300 GISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 336 (374)
Q Consensus 300 ~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 336 (374)
.+.+++..++..++.+-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 3566777788889999999999999999999887654
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=63.32 E-value=15 Score=34.70 Aligned_cols=67 Identities=13% Similarity=0.098 Sum_probs=48.5
Q ss_pred EEEECCCCCEEEE-EeCCCeEEEEEccCC------eE-------EEEecccCCceEEEEEeCCCCEEEEEeCCCcEEEec
Q 017296 303 GTSIRPDSKIAAT-AGWDRRVRIYNYRKG------SA-------LAILKYHHATCNAVSFSSDCKLMASASEDSTVALWE 368 (374)
Q Consensus 303 ~~~~sp~~~~l~s-~~~dg~v~iwd~~~~------~~-------~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~~W~ 368 (374)
.+-++|||++++. |-.+.+|.++|.... +. ....+ -.......+|.++|....|---|+.|--|+
T Consensus 327 Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWn 405 (638)
T 3sbq_A 327 GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWN 405 (638)
T ss_dssp CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEE
T ss_pred ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEe
Confidence 4778999999765 446899999999742 11 11222 224578899999996666667999999998
Q ss_pred CC
Q 017296 369 LY 370 (374)
Q Consensus 369 ~~ 370 (374)
+.
T Consensus 406 i~ 407 (638)
T 3sbq_A 406 ME 407 (638)
T ss_dssp HH
T ss_pred cc
Confidence 74
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=62.74 E-value=93 Score=28.47 Aligned_cols=183 Identities=11% Similarity=0.165 Sum_probs=99.7
Q ss_pred ceEEEcccCCCeEEEEecCCCceeEEeccCccCCCCCcCCCCCcceeEEEeeecCCCCCceEEEEEecCCcEEEEeccCC
Q 017296 162 KYMAVAGEQLSEVEIWDLNTAERCTRLHQNSCGGSPNFSSKGRGMCMAVQAYLPSKSQGFVNVLAGYEDGSILVWDIRNP 241 (374)
Q Consensus 162 ~~~~~~~~~d~~i~vWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~dg~i~iwdl~~~ 241 (374)
+.+++-+ ..+++++|+++.+.+......+.. .| + .... ....-+++ +..|.-|++...
T Consensus 78 ~iiALra--g~~lQiFnle~K~klks~~~~e~V---vf-----W------kWis---~~~l~lVT---~taVyHWsi~~~ 135 (494)
T 1bpo_A 78 KVIALKA--GKTLQIFNIEMKSKMKAHTMTDDV---TF-----W------KWIS---LNTVALVT---DNAVYHWSMEGE 135 (494)
T ss_dssp SCEEEEE--TTEEEEEETTTTEEEEEEECSSCC---CE-----E------EEEE---TTEEEEEC---SSEEEEEESSSS
T ss_pred cEEEEec--CCeEEEEchHHhhhhcceecCCCc---eE-----E------EecC---CCeEEEEc---CCeeEEecccCC
Confidence 4455444 368999999998776555432100 00 0 1111 11111232 567899998755
Q ss_pred CCceeeeecCc----cCeEEEEEecCCCceEEEe-------cCCeEEEEEcCCCCCeE---------------------E
Q 017296 242 GIPLTAMKVHL----EPVLCLSIDESCNGGISGG-------ADQKIVLYNLDHSTGSC---------------------V 289 (374)
Q Consensus 242 ~~~~~~~~~h~----~~v~~~~~~~~~~~~~s~s-------~D~~i~lwd~~~~~~~~---------------------~ 289 (374)
..|...+..|. ..|..-..+++..+++-.| -.|.+.||+.+....+. +
T Consensus 136 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~l 215 (494)
T 1bpo_A 136 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTL 215 (494)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEE
T ss_pred CCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceE
Confidence 56666665553 3466666677777765322 24677777775321000 0
Q ss_pred E-------------EEeeec---------------------CCCCeEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEE
Q 017296 290 I-------------KKEINL---------------------ERPGISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAI 335 (374)
Q Consensus 290 ~-------------~~~~~~---------------------~~~~v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~ 335 (374)
+ .-++.. ..+.-.++.+|+--..+..-+.-|.+.++|+.++.++..
T Consensus 216 f~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~ 295 (494)
T 1bpo_A 216 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (494)
T ss_dssp EEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeee
Confidence 0 001100 011223455666556677778899999999999998876
Q ss_pred ecccCCceEEEEEeCCCCEEEEEeCCCcEEE
Q 017296 336 LKYHHATCNAVSFSSDCKLMASASEDSTVAL 366 (374)
Q Consensus 336 ~~~h~~~v~~v~~sp~~~~las~s~D~~v~~ 366 (374)
-+--.+.|..-+-..+..=++.....|.|--
T Consensus 296 nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~ 326 (494)
T 1bpo_A 296 NRISGETIFVTAPHEATAGIIGVNRKGQVLS 326 (494)
T ss_dssp EECCSSCEEEEEEETTTTEEEEEETTCEEEE
T ss_pred ecccCCceEEecccCCCCcEEEEccCceEEE
Confidence 6544555655444444333444445555443
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=61.99 E-value=37 Score=28.58 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=46.8
Q ss_pred CCeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC----CeEEEEEccCCeEEEEecccCCceEEEEE
Q 017296 273 DQKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD----RRVRIYNYRKGSALAILKYHHATCNAVSF 348 (374)
Q Consensus 273 D~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d----g~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 348 (374)
.+.+..||... .++.....+...+.....+. -++++++.||.+ ..+.+||..+.+-...-.-........+.
T Consensus 23 ~~~~~~~d~~~--~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 98 (306)
T 3ii7_A 23 PQSCRYFNPKD--YSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAAC 98 (306)
T ss_dssp TTSEEEEETTT--TEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEE
T ss_pred CceEEEecCCC--CCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEE
Confidence 35677777653 33332222222222222333 366777778765 67888998776422211111111111122
Q ss_pred eCCCCEEEEEeCC------CcEEEecCC
Q 017296 349 SSDCKLMASASED------STVALWELY 370 (374)
Q Consensus 349 sp~~~~las~s~D------~~v~~W~~~ 370 (374)
.-++++++.|+.+ ..+.++|..
T Consensus 99 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~ 126 (306)
T 3ii7_A 99 AAEGKIYTSGGSEVGNSALYLFECYDTR 126 (306)
T ss_dssp EETTEEEEECCBBTTBSCCCCEEEEETT
T ss_pred EECCEEEEECCCCCCCcEeeeEEEEeCC
Confidence 2377877887765 346666653
No 331
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=60.72 E-value=32 Score=32.72 Aligned_cols=58 Identities=14% Similarity=0.117 Sum_probs=39.2
Q ss_pred eEEEEECCCCCEEEEEeCC------------CeEEEEEccCCeEEEEecccC-CceEEEEEeCCCCEEEEE
Q 017296 301 ISGTSIRPDSKIAATAGWD------------RRVRIYNYRKGSALAILKYHH-ATCNAVSFSSDCKLMASA 358 (374)
Q Consensus 301 v~~~~~sp~~~~l~s~~~d------------g~v~iwd~~~~~~~~~~~~h~-~~v~~v~~sp~~~~las~ 358 (374)
.-.++|+|.|.++++...+ ..+.+.+..+++....+.++. ..+..+.|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 3569999999988765432 134444555666554455554 478889999999977654
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=59.85 E-value=78 Score=26.62 Aligned_cols=100 Identities=15% Similarity=0.190 Sum_probs=50.2
Q ss_pred CceEEEecC-----CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEEccCCeEEE
Q 017296 265 NGGISGGAD-----QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALA 334 (374)
Q Consensus 265 ~~~~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----g~v~iwd~~~~~~~~ 334 (374)
..++.|+.+ +.+..||+.. ..+.....+...+.....+.+ ++++++.|+.+ ..+.+||..+.+- .
T Consensus 170 ~iyv~GG~~~~~~~~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~ 244 (308)
T 1zgk_A 170 LLYAVGGFDGTNRLNSAECYYPER--NEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW-T 244 (308)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTT--TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE-E
T ss_pred EEEEEeCCCCCCcCceEEEEeCCC--CeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE-E
Confidence 344555544 4577787753 333322222222222333333 67777878765 5688999877542 2
Q ss_pred EecccC-C-ceEEEEEeCCCCEEEEEeCCC-----cEEEecCC
Q 017296 335 ILKYHH-A-TCNAVSFSSDCKLMASASEDS-----TVALWELY 370 (374)
Q Consensus 335 ~~~~h~-~-~v~~v~~sp~~~~las~s~D~-----~v~~W~~~ 370 (374)
.+..-. . .-.+++. -++++++.|+.++ .|.++|..
T Consensus 245 ~~~~~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 245 FVAPMKHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp ECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETT
T ss_pred ECCCCCCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCC
Confidence 222111 1 1112222 3778888777543 35555543
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=58.44 E-value=49 Score=28.58 Aligned_cols=87 Identities=11% Similarity=0.062 Sum_probs=39.4
Q ss_pred CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC----------------------CeEEEEEccCCe
Q 017296 274 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD----------------------RRVRIYNYRKGS 331 (374)
Q Consensus 274 ~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d----------------------g~v~iwd~~~~~ 331 (374)
..+..+|++..+..+.....+...+......+...++++++.||.+ ..+.+||..+.+
T Consensus 217 ~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~ 296 (357)
T 2uvk_A 217 DAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK 296 (357)
T ss_dssp CCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred CceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc
Confidence 3566677644444444332222222211222233456777777742 257788887653
Q ss_pred --EEEEecccCCceEEEEEeCCCCEEEEEeCCC
Q 017296 332 --ALAILKYHHATCNAVSFSSDCKLMASASEDS 362 (374)
Q Consensus 332 --~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 362 (374)
.+..+...... +.+...++++++.|+.+.
T Consensus 297 W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 297 WDKSGELSQGRAY--GVSLPWNNSLLIIGGETA 327 (357)
T ss_dssp CEEEEECSSCCBS--SEEEEETTEEEEEEEECG
T ss_pred eeeCCCCCCCccc--ceeEEeCCEEEEEeeeCC
Confidence 23233222111 222334788888888653
No 334
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=57.51 E-value=12 Score=36.36 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=28.7
Q ss_pred CceeEEEEeCCCCEEEEecCCCcEEEEeCcccceeeee
Q 017296 19 ASVTDVCFHQTKPILFAGTTGGELRIWDTVQHRTVSSS 56 (374)
Q Consensus 19 ~~V~~l~~~~~~~~l~s~s~D~~v~vWd~~~~~~~~~~ 56 (374)
..|.++.+ +..+|++-+.|.++|+||+.+++++.+.
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 34665555 4789999999999999999999876553
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=55.24 E-value=94 Score=26.16 Aligned_cols=61 Identities=8% Similarity=0.008 Sum_probs=31.9
Q ss_pred CCCEEEEEeCC--------CeEEEEEccCCeEEEEecc-cCCceEEEEEeCCCCEEEEEeC-C-----CcEEEecCC
Q 017296 309 DSKIAATAGWD--------RRVRIYNYRKGSALAILKY-HHATCNAVSFSSDCKLMASASE-D-----STVALWELY 370 (374)
Q Consensus 309 ~~~~l~s~~~d--------g~v~iwd~~~~~~~~~~~~-h~~~v~~v~~sp~~~~las~s~-D-----~~v~~W~~~ 370 (374)
++++++.||.+ ..+.+||..+.+ ...+.. ....-...+...++++++.|+. + ..+.++|..
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~ 173 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFK-WGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPK 173 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETT
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCc-EeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCC
Confidence 56777777743 458889987764 222211 1111111122247777777775 2 345555543
No 336
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=54.41 E-value=96 Score=26.01 Aligned_cols=90 Identities=11% Similarity=0.207 Sum_probs=45.2
Q ss_pred CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEEccCCeEEEEecc---cCCceEE
Q 017296 274 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALAILKY---HHATCNA 345 (374)
Q Consensus 274 ~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~---h~~~v~~ 345 (374)
..+..||... ..+.....+...+.....+.+ ++++++.|+.+ ..+.+||..+.+- ..+.. ....-..
T Consensus 137 ~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~~p~~r~~~~~ 211 (308)
T 1zgk_A 137 NSVERYEPER--DEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEW-RMITAMNTIRSGAGV 211 (308)
T ss_dssp CCEEEEETTT--TEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEE-EECCCCSSCCBSCEE
T ss_pred ccEEEECCCC--CeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeE-eeCCCCCCccccceE
Confidence 3577777753 333322222222222233333 67777777765 4588888876542 22211 1111122
Q ss_pred EEEeCCCCEEEEEeCC-----CcEEEecCC
Q 017296 346 VSFSSDCKLMASASED-----STVALWELY 370 (374)
Q Consensus 346 v~~sp~~~~las~s~D-----~~v~~W~~~ 370 (374)
+.+ ++++++.|+.+ ..+.++|+.
T Consensus 212 ~~~--~~~iyv~GG~~~~~~~~~v~~yd~~ 239 (308)
T 1zgk_A 212 CVL--HNCIYAAGGYDGQDQLNSVERYDVE 239 (308)
T ss_dssp EEE--TTEEEEECCBCSSSBCCCEEEEETT
T ss_pred EEE--CCEEEEEeCCCCCCccceEEEEeCC
Confidence 222 77777777765 446666653
No 337
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=53.26 E-value=99 Score=25.81 Aligned_cols=96 Identities=18% Similarity=0.190 Sum_probs=47.8
Q ss_pred CCcEEEEeccCCC-CceeeeecCccCeEEEEEecCCCceEEEecC----CeEEEEEcCCCCCeEEEEEeeecCCCCeEEE
Q 017296 230 DGSILVWDIRNPG-IPLTAMKVHLEPVLCLSIDESCNGGISGGAD----QKIVLYNLDHSTGSCVIKKEINLERPGISGT 304 (374)
Q Consensus 230 dg~i~iwdl~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~D----~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~ 304 (374)
...+..||+.+.. ..+..+.........+.++ +..++.|+.+ ..+..+|.... .+.....+...+.....+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~--~~lyv~GG~~~~~~~~~~~~d~~~~--~W~~~~~~p~~r~~~~~~ 98 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWD--NVVYILGGSQLFPIKRMDCYNVVKD--SWYSKLGPPTPRDSLAAC 98 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEEET--TEEEEECCBSSSBCCEEEEEETTTT--EEEEEECCSSCCBSCEEE
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEEEC--CEEEEEeCCCCCCcceEEEEeCCCC--eEEECCCCCccccceeEE
Confidence 4678889886531 0111111111112222222 2344566644 56777777543 333333332222222333
Q ss_pred EECCCCCEEEEEeCC------CeEEEEEccCCe
Q 017296 305 SIRPDSKIAATAGWD------RRVRIYNYRKGS 331 (374)
Q Consensus 305 ~~sp~~~~l~s~~~d------g~v~iwd~~~~~ 331 (374)
.+ ++++++.||.+ ..+.+||..+.+
T Consensus 99 ~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~ 129 (306)
T 3ii7_A 99 AA--EGKIYTSGGSEVGNSALYLFECYDTRTES 129 (306)
T ss_dssp EE--TTEEEEECCBBTTBSCCCCEEEEETTTTE
T ss_pred EE--CCEEEEECCCCCCCcEeeeEEEEeCCCCc
Confidence 33 67777878765 468889987764
No 338
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=52.71 E-value=12 Score=39.00 Aligned_cols=36 Identities=6% Similarity=0.174 Sum_probs=30.0
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEEccCCeEEEEe
Q 017296 301 ISGTSIRPDSKIAATAGWDRRVRIYNYRKGSALAIL 336 (374)
Q Consensus 301 v~~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 336 (374)
+.+++..++.+++.+-+.|+++|+|++.+++++.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 445566678889999999999999999999887654
No 339
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=51.07 E-value=66 Score=30.45 Aligned_cols=58 Identities=14% Similarity=0.122 Sum_probs=38.3
Q ss_pred eEEEEECCCCCEEEEEeCC------------CeEEEEEccCCeEEEEeccc-CCceEEEEEeCCCCEEEEE
Q 017296 301 ISGTSIRPDSKIAATAGWD------------RRVRIYNYRKGSALAILKYH-HATCNAVSFSSDCKLMASA 358 (374)
Q Consensus 301 v~~~~~sp~~~~l~s~~~d------------g~v~iwd~~~~~~~~~~~~h-~~~v~~v~~sp~~~~las~ 358 (374)
...++|.++|.+.++.... ..|..++..+++....+.+. ...++.++|+||++.|..+
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 4579999999987744321 14555555566654444433 2468999999999977654
No 340
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=50.76 E-value=29 Score=33.76 Aligned_cols=29 Identities=3% Similarity=0.063 Sum_probs=25.1
Q ss_pred CCCEEEEEeCCCeEEEEEccCCeEEEEec
Q 017296 309 DSKIAATAGWDRRVRIYNYRKGSALAILK 337 (374)
Q Consensus 309 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 337 (374)
+..++++-+.|+++|+|++.+++++.+..
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 46799999999999999999999877654
No 341
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=49.20 E-value=1.2e+02 Score=25.54 Aligned_cols=61 Identities=18% Similarity=0.128 Sum_probs=31.2
Q ss_pred CCCEEEEEeCC-------CeEEEEEccCCeEEEEecccC-CceEEEEEeCCCCEEEEEeCC------CcEEEecCC
Q 017296 309 DSKIAATAGWD-------RRVRIYNYRKGSALAILKYHH-ATCNAVSFSSDCKLMASASED------STVALWELY 370 (374)
Q Consensus 309 ~~~~l~s~~~d-------g~v~iwd~~~~~~~~~~~~h~-~~v~~v~~sp~~~~las~s~D------~~v~~W~~~ 370 (374)
++++++.||.+ ..+.+||..+.+=. .+..-+ ..-...+...++++++.|+.+ ..+.++|..
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWS-EVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEE-EECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEe-ECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCC
Confidence 57777778764 35778888765422 221111 111111222477777777642 236666553
No 342
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=47.23 E-value=1.2e+02 Score=25.14 Aligned_cols=100 Identities=17% Similarity=0.198 Sum_probs=48.9
Q ss_pred CceEEEecCC-----eEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC-------CeEEEEEccCCeE
Q 017296 265 NGGISGGADQ-----KIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-------RRVRIYNYRKGSA 332 (374)
Q Consensus 265 ~~~~s~s~D~-----~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-------g~v~iwd~~~~~~ 332 (374)
..++.|+.++ .+..||+.. ..+.....+...+.....+.+ ++++++.|+.+ ..+.+||..+.+-
T Consensus 110 ~iyv~GG~~~~~~~~~~~~~d~~~--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 110 LLYAVGGFDGSTGLSSVEAYNIKS--NEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTT--TEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred EEEEEcCCCCCccCceEEEEeCCC--CeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 3445566543 466676653 344333222222222222333 56777777653 3588899876542
Q ss_pred EE--EecccCCceEEEEEeCCCCEEEEEeCCC-----cEEEecCC
Q 017296 333 LA--ILKYHHATCNAVSFSSDCKLMASASEDS-----TVALWELY 370 (374)
Q Consensus 333 ~~--~~~~h~~~v~~v~~sp~~~~las~s~D~-----~v~~W~~~ 370 (374)
.. .+......-..+. -++++++.|+.++ .+.++|..
T Consensus 186 ~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~ 228 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPT 228 (302)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETT
T ss_pred EECCCCccccccccEEE--ECCEEEEECCCCCCcccceEEEEeCC
Confidence 21 1111111112222 3778888877653 46666653
No 343
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=46.86 E-value=54 Score=28.65 Aligned_cols=112 Identities=13% Similarity=0.128 Sum_probs=59.3
Q ss_pred EEEEEecCCcEEEEeccCCCCceeeeecC-ccCeEEEEEe--cCCCceEEE--ecCCeEEEEEcCCCCCeEEEEEeeec-
Q 017296 223 NVLAGYEDGSILVWDIRNPGIPLTAMKVH-LEPVLCLSID--ESCNGGISG--GADQKIVLYNLDHSTGSCVIKKEINL- 296 (374)
Q Consensus 223 ~~~~gs~dg~i~iwdl~~~~~~~~~~~~h-~~~v~~~~~~--~~~~~~~s~--s~D~~i~lwd~~~~~~~~~~~~~~~~- 296 (374)
.++.++.||.|.-.|.++. ..+=.++.. ..++....-. +....++.. ..||.+..++.+. +..........
T Consensus 12 ~V~v~t~dG~l~Ald~~tG-~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~--G~~~~~~~~~~l 88 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNG-HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQ--GLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEETTSCEEEEETTTT-EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTT--EEEEEEEEHHHH
T ss_pred EEEEEeCCCeEEEEECCCC-cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCC--CcEEeeeccccc
Confidence 4788999999999997653 222112111 1222221100 001123333 5799998888653 33332222110
Q ss_pred -CCCCeEE---EEE-CC----CCCEEEEEeCCCeEEEEEccCCeEEEEec
Q 017296 297 -ERPGISG---TSI-RP----DSKIAATAGWDRRVRIYNYRKGSALAILK 337 (374)
Q Consensus 297 -~~~~v~~---~~~-sp----~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 337 (374)
....+.. -.+ .+ .+..+..|+.+|++...|..+|+.+..+.
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEES
T ss_pred eeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEe
Confidence 0111110 001 00 34567889999999999999999988775
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=46.61 E-value=1.3e+02 Score=25.24 Aligned_cols=83 Identities=16% Similarity=0.139 Sum_probs=40.9
Q ss_pred CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCC-----eEEEEEccCCeEEEEeccc-CCceEEEE
Q 017296 274 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR-----RVRIYNYRKGSALAILKYH-HATCNAVS 347 (374)
Q Consensus 274 ~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg-----~v~iwd~~~~~~~~~~~~h-~~~v~~v~ 347 (374)
+.+..||.... .+.....+...+.....+.+ ++++++.||.++ .+.+||..+.+ ...+..- .......+
T Consensus 165 ~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~ 239 (315)
T 4asc_A 165 NKMCVYDPKKF--EWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK-WAPFEAFPQERSSLSL 239 (315)
T ss_dssp CCEEEEETTTT--EEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE-EEEECCCSSCCBSCEE
T ss_pred ceEEEEeCCCC--eEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe-EEECCCCCCcccceeE
Confidence 46777877543 33322222222222223333 677888888654 57888887654 2222211 11111111
Q ss_pred EeCCCCEEEEEeCC
Q 017296 348 FSSDCKLMASASED 361 (374)
Q Consensus 348 ~sp~~~~las~s~D 361 (374)
..-++++++.|+.+
T Consensus 240 ~~~~~~l~v~GG~~ 253 (315)
T 4asc_A 240 VSLVGTLYAIGGFA 253 (315)
T ss_dssp EEETTEEEEEEEEE
T ss_pred EEECCEEEEECCcc
Confidence 22377877777764
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=46.22 E-value=1.1e+02 Score=26.30 Aligned_cols=85 Identities=14% Similarity=0.115 Sum_probs=41.1
Q ss_pred CeEEEEEcCCCCCeEEEEEeee-cCCCCeEEEEECCCCCEEEEEeC-C---------CeEEEEEccCCeEEEEecc-c-C
Q 017296 274 QKIVLYNLDHSTGSCVIKKEIN-LERPGISGTSIRPDSKIAATAGW-D---------RRVRIYNYRKGSALAILKY-H-H 340 (374)
Q Consensus 274 ~~i~lwd~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~s~~~-d---------g~v~iwd~~~~~~~~~~~~-h-~ 340 (374)
+.+..+|+...+..+.....+. ..+.....+.+ ++++++.||. + ..+.+||..+.+ ...+.. . .
T Consensus 31 ~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~p~ 107 (357)
T 2uvk_A 31 TAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS-WVKLMSHAPM 107 (357)
T ss_dssp TCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTTE-EEECSCCCSS
T ss_pred CeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCCc-EEECCCCCCc
Confidence 3566666653233333222222 12222233333 5677777776 2 468888887654 222211 1 1
Q ss_pred CceEEEEEeCCCCEEEEEeCC
Q 017296 341 ATCNAVSFSSDCKLMASASED 361 (374)
Q Consensus 341 ~~v~~v~~sp~~~~las~s~D 361 (374)
......+...++++++.|+.+
T Consensus 108 ~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 108 GMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp CCSSEEEEEETTEEEEEECCC
T ss_pred ccccceEEEECCEEEEEeCcC
Confidence 111121222578888888765
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=42.98 E-value=3.5e+02 Score=29.13 Aligned_cols=33 Identities=9% Similarity=0.219 Sum_probs=24.1
Q ss_pred EEEECCCCCEEEEEeCCCeEEEEEccCCeEEEE
Q 017296 303 GTSIRPDSKIAATAGWDRRVRIYNYRKGSALAI 335 (374)
Q Consensus 303 ~~~~sp~~~~l~s~~~dg~v~iwd~~~~~~~~~ 335 (374)
++.+|+.-..+..-+.-|.|.++|+.++.++..
T Consensus 263 ~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 345555555666777899999999999876543
No 347
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=33.62 E-value=92 Score=27.13 Aligned_cols=28 Identities=14% Similarity=0.167 Sum_probs=23.9
Q ss_pred EEEEEeCCCeEEEEEccCCeEEEEeccc
Q 017296 312 IAATAGWDRRVRIYNYRKGSALAILKYH 339 (374)
Q Consensus 312 ~l~s~~~dg~v~iwd~~~~~~~~~~~~h 339 (374)
+++.++.||.|.-+|..+|+.+..++..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~ 39 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPE 39 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGG
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 6778899999999999999998887654
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=32.85 E-value=2.5e+02 Score=27.05 Aligned_cols=103 Identities=12% Similarity=0.156 Sum_probs=53.0
Q ss_pred CCceEEEecC------CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCCC--eEEEEEccCCeEEEE
Q 017296 264 CNGGISGGAD------QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWDR--RVRIYNYRKGSALAI 335 (374)
Q Consensus 264 ~~~~~s~s~D------~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg--~v~iwd~~~~~~~~~ 335 (374)
+..++.||.+ +.+.+||... ..+.....+...+..-.. +.-.++++++.||.++ .+.+||..+.+ ...
T Consensus 452 ~~lyv~GG~~~~~~~~~dv~~yd~~t--~~W~~~~~~p~~R~~h~~-~~~~~~~iyv~GG~~~~~~v~~yd~~t~~-W~~ 527 (695)
T 2zwa_A 452 NQLLLIGGRKAPHQGLSDNWIFDMKT--REWSMIKSLSHTRFRHSA-CSLPDGNVLILGGVTEGPAMLLYNVTEEI-FKD 527 (695)
T ss_dssp TEEEEECCBSSTTCBCCCCEEEETTT--TEEEECCCCSBCCBSCEE-EECTTSCEEEECCBCSSCSEEEEETTTTE-EEE
T ss_pred CEEEEEcCCCCCCCccccEEEEeCCC--CcEEECCCCCCCcccceE-EEEcCCEEEEECCCCCCCCEEEEECCCCc-eEE
Confidence 3445556543 3466777653 333332222222222222 3324788888888765 68899987754 222
Q ss_pred ecc------cCCceEEEEEeCC-CCEEEEEeC--C-----CcEEEecCC
Q 017296 336 LKY------HHATCNAVSFSSD-CKLMASASE--D-----STVALWELY 370 (374)
Q Consensus 336 ~~~------h~~~v~~v~~sp~-~~~las~s~--D-----~~v~~W~~~ 370 (374)
+.. ....-.++.+..+ +++++.|+. + ..+..||+.
T Consensus 528 ~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~ 576 (695)
T 2zwa_A 528 VTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYD 576 (695)
T ss_dssp CCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEEC
T ss_pred ccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEcc
Confidence 221 1111223455555 677777765 2 346666653
No 349
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=31.51 E-value=2.3e+02 Score=23.68 Aligned_cols=83 Identities=13% Similarity=0.154 Sum_probs=39.7
Q ss_pred CeEEEEEcCCCCCeEEEEEeeecCCCCeEEEEECCCCCEEEEEeCC-----CeEEEEEccCCeEEEEecccC-CceEEEE
Q 017296 274 QKIVLYNLDHSTGSCVIKKEINLERPGISGTSIRPDSKIAATAGWD-----RRVRIYNYRKGSALAILKYHH-ATCNAVS 347 (374)
Q Consensus 274 ~~i~lwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~h~-~~v~~v~ 347 (374)
+.+..+|+.. ..+.....+...+.....+.+ ++++++.||.+ ..+.+||..+.+ ...+...+ ......+
T Consensus 175 ~~~~~yd~~~--~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~ 249 (318)
T 2woz_A 175 NRVFIYNPKK--GDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK-WEVMTEFPQERSSISL 249 (318)
T ss_dssp CCEEEEETTT--TEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC-EEECCCCSSCCBSCEE
T ss_pred ceEEEEcCCC--CEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe-EEECCCCCCcccceEE
Confidence 3577787754 333332222222222222333 56777777754 356788887654 22222111 1111112
Q ss_pred EeCCCCEEEEEeCC
Q 017296 348 FSSDCKLMASASED 361 (374)
Q Consensus 348 ~sp~~~~las~s~D 361 (374)
...++++++.|+.+
T Consensus 250 ~~~~~~i~v~GG~~ 263 (318)
T 2woz_A 250 VSLAGSLYAIGGFA 263 (318)
T ss_dssp EEETTEEEEECCBC
T ss_pred EEECCEEEEECCee
Confidence 22367777777654
No 350
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=30.75 E-value=3.7e+02 Score=25.86 Aligned_cols=106 Identities=15% Similarity=0.167 Sum_probs=55.3
Q ss_pred CCCceEEEecCC--eEEEEEcCCCCCeEEEEEe---eecCCCCeEEEEECCC-CCEEEEEeC--C-----CeEEEEEccC
Q 017296 263 SCNGGISGGADQ--KIVLYNLDHSTGSCVIKKE---INLERPGISGTSIRPD-SKIAATAGW--D-----RRVRIYNYRK 329 (374)
Q Consensus 263 ~~~~~~s~s~D~--~i~lwd~~~~~~~~~~~~~---~~~~~~~v~~~~~sp~-~~~l~s~~~--d-----g~v~iwd~~~ 329 (374)
++..++.||.++ .+.+||... ..+..... +...+....++.+..+ +++++.||. + ..+.+||+.+
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t--~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~ 577 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTE--EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDA 577 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTT--TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECT
T ss_pred CCEEEEECCCCCCCCEEEEECCC--CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccC
Confidence 344556666554 677887754 33332221 1122333344566655 777777876 2 4588899877
Q ss_pred CeE-----EEEecc---cCCceEEEEEeCCCCEEEEEeCC--------CcEEEecCC
Q 017296 330 GSA-----LAILKY---HHATCNAVSFSSDCKLMASASED--------STVALWELY 370 (374)
Q Consensus 330 ~~~-----~~~~~~---h~~~v~~v~~sp~~~~las~s~D--------~~v~~W~~~ 370 (374)
.+- ...+.. ....-.++....++++++.|+.+ ..|.++|..
T Consensus 578 ~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 578 ENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp TCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred CccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 661 222211 11111222333347877877743 346666654
No 351
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=29.12 E-value=2.6e+02 Score=23.58 Aligned_cols=121 Identities=4% Similarity=-0.010 Sum_probs=0.0
Q ss_pred EEEeccCCCCceeeeecCccCeEEEEEecCCCceEEEec------------CCeEEEEEcCCCCCeEEEEEeeecCCCCe
Q 017296 234 LVWDIRNPGIPLTAMKVHLEPVLCLSIDESCNGGISGGA------------DQKIVLYNLDHSTGSCVIKKEINLERPGI 301 (374)
Q Consensus 234 ~iwdl~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~s~s~------------D~~i~lwd~~~~~~~~~~~~~~~~~~~~v 301 (374)
+||-+...+.....+.... +..+..+.+...+..-.. +..|+..+++......+.. -
T Consensus 38 ~ly~~~~dg~~~~~l~~~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~---------~ 106 (302)
T 3s25_A 38 RLYAMNIDGSNIHKLSNDT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDP---------D 106 (302)
T ss_dssp EEEEEETTSCSCEEEEEEE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEEC---------S
T ss_pred eEEEEcCCCCCCEEccCCc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeec---------C
Q ss_pred EEEEECCCCCEEEEEe----CCCeEEEEEccCCeEEEEecccCCceEEEEEeCCCCEEEEEeC-CCcEEEecCC
Q 017296 302 SGTSIRPDSKIAATAG----WDRRVRIYNYRKGSALAILKYHHATCNAVSFSSDCKLMASASE-DSTVALWELY 370 (374)
Q Consensus 302 ~~~~~sp~~~~l~s~~----~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~-D~~v~~W~~~ 370 (374)
.+..|+|+++.|+=.. .+..|..-++ ++.....+..+.. .+|+|+++.|.-.+. ...|..-++.
T Consensus 107 ~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~-dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~ 175 (302)
T 3s25_A 107 PCIYASLIGNYIYYLHYDTQTATSLYRIRI-DGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTA 175 (302)
T ss_dssp CEEEEEEETTEEEEEEESSSSCEEEEEEET-TSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETT
T ss_pred CccEEEEeCCEEEEEeecCCCCceEEEEEC-CCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECC
Done!