BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017301
(374 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 325 bits (834), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 230/353 (65%), Gaps = 5/353 (1%)
Query: 10 LKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI 69
LK + F + + Y+I+E IG G+YGVV +A TG++VAIKKI + F+ +++A R
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 100
Query: 70 LREVKLLRLLRHPDIVEIKRIMLPPSK-REFKDIYVVFELMESDLHQVIKANDDLTREHH 128
LRE+K+L+ +H +I+ IK I+ P EFK +YVV +LMESDLHQ+I ++ LT EH
Sbjct: 101 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 160
Query: 129 QFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLAR-VAFSDTPMTVFWT 187
++FLYQ+LR LKYMH+A V HRDLKP N+L N NC+LK+ DFG+AR + S F T
Sbjct: 161 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 220
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLL 247
+YVATRWYRAPEL S +YT AID+WS+GCIF E+L + LFPGK+ VHQL LI +L
Sbjct: 221 EYVATRWYRAPELMLSL-HEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL 279
Query: 248 GTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTA 307
GTPSP I V E+ R Y+ + + PVP +P D AL LL R++ F+P R +A
Sbjct: 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISA 339
Query: 308 EEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYH 360
AL P+ + EP C P +F F+R +T++ I+E I EI ++H
Sbjct: 340 AAALRHPFLAKYHDPDDEPDCAP--PFDFAFDREALTRERIKEAIVAEIEDFH 390
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 325 bits (833), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/353 (47%), Positives = 230/353 (65%), Gaps = 5/353 (1%)
Query: 10 LKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI 69
LK + F + + Y+I+E IG G+YGVV +A TG++VAIKKI + F+ +++A R
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 101
Query: 70 LREVKLLRLLRHPDIVEIKRIMLPPSK-REFKDIYVVFELMESDLHQVIKANDDLTREHH 128
LRE+K+L+ +H +I+ IK I+ P EFK +YVV +LMESDLHQ+I ++ LT EH
Sbjct: 102 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 161
Query: 129 QFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLAR-VAFSDTPMTVFWT 187
++FLYQ+LR LKYMH+A V HRDLKP N+L N NC+LK+ DFG+AR + S F T
Sbjct: 162 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 221
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLL 247
+YVATRWYRAPEL S +YT AID+WS+GCIF E+L + LFPGK+ VHQL LI +L
Sbjct: 222 EYVATRWYRAPELMLSLH-EYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL 280
Query: 248 GTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTA 307
GTPSP I V E+ R Y+ + + PVP +P D AL LL R++ F+P R +A
Sbjct: 281 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISA 340
Query: 308 EEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYH 360
AL P+ + EP C P +F F+R +T++ I+E I EI ++H
Sbjct: 341 AAALRHPFLAKYHDPDDEPDCAP--PFDFAFDREALTRERIKEAIVAEIEDFH 391
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 90
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 91 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 149
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 150 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 209
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 210 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 268
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 269 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 325
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 326 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 364
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 141
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 202 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 317
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 318 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 146
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 206
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 207 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 265
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 266 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 322
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 323 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 361
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 88
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 89 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 147
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 148 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 207
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 208 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 266
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 267 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 323
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 324 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 362
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 79
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 80 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 138
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 139 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 198
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 199 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 257
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 258 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 314
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 315 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 353
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 145
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 206 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 321
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 322 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 141
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 142 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 202 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 317
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 318 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 301 bits (772), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 161/340 (47%), Positives = 224/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 143
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 204 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY LA+
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY---LAQY- 318
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 319 YDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 84
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 143
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 204 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 262
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 319
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 320 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 139
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 200 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 258
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 259 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 315
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 316 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 354
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH-LSNDHICYFLYQILRGLKYIH 145
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 206 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 321
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 322 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 301 bits (771), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 159/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 103 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 161
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 162 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 222 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 281 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 337
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 338 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 376
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 300 bits (769), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAI+KI FEH + R LRE+K+L RH +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKI-SPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 145
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 206 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 321
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 322 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 300 bits (767), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 221/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 80
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 81 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 139
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 140 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 199
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+P E + + N KA
Sbjct: 200 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQEDLNCIINLKA 258
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 259 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 315
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 316 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 354
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 297 bits (761), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 221/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 145
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 206 S-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 321
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 322 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 297 bits (761), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 221/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 141
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 202 S-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 260
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 317
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 318 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 297 bits (760), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 221/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYXQRTLREIKILLRFRHEN 86
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 145
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 146 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 205
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 206 S-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 321
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 322 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 297 bits (760), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 158/340 (46%), Positives = 221/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 141
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 202 S-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 317
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 318 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 296 bits (759), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 220/340 (64%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 86
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 87 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 145
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F + VATRWYRAPE+ +
Sbjct: 146 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 205
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 206 S-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 264
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 265 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 321
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 322 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 360
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 296 bits (759), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 220/340 (64%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 87
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 88 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 146
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLARVA D T F + VATRWYRAPE+ +
Sbjct: 147 SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLN 206
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 207 S-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 265
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 266 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 322
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 323 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 361
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 296 bits (757), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 160/340 (47%), Positives = 222/340 (65%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLAFRHEN 84
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 85 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 143
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 144 SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 203
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + N KA
Sbjct: 204 -SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKA 262
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY LA+
Sbjct: 263 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPY---LAQY- 318
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 319 YDPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 358
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 293 bits (751), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 219/340 (64%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 44 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 102
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V LM +DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 161
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N LK+CDFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 162 SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 221
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 222 S-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKA 280
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 281 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 337
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 338 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 376
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 293 bits (750), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/340 (46%), Positives = 220/340 (64%), Gaps = 9/340 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L IG+G+YG+VC+A D +VAIKKI FEH + R LRE+K+L RH +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI-SPFEHQTYCQRTLREIKILLRFRHEN 82
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+ I I+ P+ + KD+Y+V +LME+DL++++K L+ +H +FLYQ+LR LKY+H
Sbjct: 83 IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 141
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N LK+ DFGLARVA D T F T+YVATRWYRAPE+ +
Sbjct: 142 SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLN 201
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 202 S-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNXIINLKA 260
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K VP + FPN D AL LL +++ F+P R E+ALA PY +
Sbjct: 261 RNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYY--- 317
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHP 361
+PS +PI++ F+F E + K+ ++ELI+ E + P
Sbjct: 318 -DPSDEPIAEAPFKFDMELDDLPKEKLKELIFEETARFQP 356
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/344 (43%), Positives = 223/344 (64%), Gaps = 9/344 (2%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY L+ IG+G+YG+V +A D +VAIKKI FEH + R LRE+++L RH +
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKI-SPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
++ I+ I+ + +D+Y+V +LME+DL++++K+ L+ +H +FLYQ+LR LKY+H
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ-LSNDHICYFLYQILRGLKYIH 161
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ANV HRDLKP N+L N C LK+CDFGLAR+A + T F T+ VATRWYRAPE+ +
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
YT +IDIWS+GCI AE+L+ +P+FPGK + QL+ I +LG+PS E + + N KA
Sbjct: 222 S-KGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINMKA 280
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
R YL + K V + FP D AL LL R++ F+P R T EEALA PY +
Sbjct: 281 RNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYY--- 337
Query: 324 REPSCQPISKLEFEF--ERRRVTKDDIRELIYREILEYHPQLLK 365
+P+ +P+++ F F E + K+ ++ELI++E + P +L+
Sbjct: 338 -DPTDEPVAEEPFTFAMELDDLPKERLKELIFQETARFQPGVLE 380
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 285 bits (729), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 152/350 (43%), Positives = 226/350 (64%), Gaps = 13/350 (3%)
Query: 19 YGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRL 78
Y ++ +++ ++G+G+YGVVC+A TGE VAIKKI + F+ A+R LRE+K+L+
Sbjct: 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRA 138
+H +I+ I I P S F ++Y++ ELM++DLH+VI + L+ +H Q+F+YQ LRA
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV---AFSD----TPMTVFWTDYVA 191
+K +H +NV HRDLKP N+L N+NC LKVCDFGLAR+ + +D T T+YVA
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVA 184
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTP- 250
TRWYRAPE+ + +KY+ A+D+WS GCI AE+ +P+FPG+ HQL LI ++GTP
Sbjct: 185 TRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
S + + + +AR+Y+ + P PL + FP V+P + LLQR++ FDP R TA+EA
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 311 LADPYFKGLAKIEREPSCQPISKLEFEFE--RRRVTKDDIRELIYREILE 358
L PY + EP +PI FEF+ + +T D+++LI+ EI
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIFS 353
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 282 bits (721), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 151/350 (43%), Positives = 225/350 (64%), Gaps = 13/350 (3%)
Query: 19 YGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRL 78
Y ++ +++ ++G+G+YGVVC+A TGE VAIKKI + F+ A+R LRE+K+L+
Sbjct: 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRA 138
+H +I+ I I P S F ++Y++ ELM++DLH+VI + L+ +H Q+F+YQ LRA
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV---AFSD----TPMTVFWTDYVA 191
+K +H +NV HRDLKP N+L N+NC LKVCDFGLAR+ + +D T T+ VA
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVA 184
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTP- 250
TRWYRAPE+ + +KY+ A+D+WS GCI AE+ +P+FPG+ HQL LI ++GTP
Sbjct: 185 TRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
S + + + +AR+Y+ + P PL + FP V+P + LLQR++ FDP R TA+EA
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 311 LADPYFKGLAKIEREPSCQPISKLEFEFE--RRRVTKDDIRELIYREILE 358
L PY + EP +PI FEF+ + +T D+++LI+ EI
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIFS 353
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 282 bits (721), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/350 (42%), Positives = 225/350 (64%), Gaps = 13/350 (3%)
Query: 19 YGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRL 78
Y ++ +++ ++G+G+YGVVC+A TGE VAIKKI + F+ A+R LRE+K+L+
Sbjct: 7 YNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI-EPFDKPLFALRTLREIKILKH 65
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRA 138
+H +I+ I I P S F ++Y++ ELM++DLH+VI + L+ +H Q+F+YQ LRA
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI-STQMLSDDHIQYFIYQTLRA 124
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV---AFSD----TPMTVFWTDYVA 191
+K +H +NV HRDLKP N+L N+NC LKVCDFGLAR+ + +D T ++VA
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVA 184
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTP- 250
TRWYRAPE+ + +KY+ A+D+WS GCI AE+ +P+FPG+ HQL LI ++GTP
Sbjct: 185 TRWYRAPEVMLT-SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
S + + + +AR+Y+ + P PL + FP V+P + LLQR++ FDP R TA+EA
Sbjct: 244 SDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303
Query: 311 LADPYFKGLAKIEREPSCQPISKLEFEFE--RRRVTKDDIRELIYREILE 358
L PY + EP +PI FEF+ + +T D+++LI+ EI
Sbjct: 304 LEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEIFS 353
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 261 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 153
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 207
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 208 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 327 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 276 bits (706), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 161
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 215
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 216 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 275 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 335 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 276 bits (706), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 160
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 214
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 215 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 274 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 333
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 334 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 369
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 276 bits (706), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 276 bits (706), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPTDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 276 bits (706), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPFDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 93 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 151
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 152 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 205
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 206 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 264
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 265 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 324
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 325 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 360
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 153
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 207
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 208 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 327 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 95 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 153
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 207
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 208 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 266
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 267 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 326
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 327 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 362
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 82 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 140
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 141 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 194
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 195 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 253
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 254 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 313
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 314 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 349
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 152
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 153 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 206
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 207 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 266 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 325
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 326 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 361
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 164
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 218
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 219 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 278 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 337
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 338 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 373
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 322 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 357
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 275 bits (704), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 138
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 192
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 193 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 252 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 311
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 312 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 347
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPQDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 81 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 139
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 140 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 193
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 194 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 252
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 253 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 312
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 313 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 348
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 251 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 161
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 215
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 216 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 275 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 335 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 102 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 160
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 214
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 215 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 273
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 274 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 333
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 334 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 369
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 80 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 138
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 192
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 193 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 251
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 252 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 311
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 312 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 347
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 275 bits (703), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPRDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 275 bits (702), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR + T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM------TGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 322 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 357
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 275 bits (702), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 106 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 164
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D M YVATRWYRAPE+
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMX----GYVATRWYRAPEIML 218
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 219 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 277
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 278 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 337
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 338 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 373
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 274 bits (701), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 208/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ D+GLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 274 bits (701), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D M F VATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF----VATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 274 bits (701), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
+ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NAM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 274 bits (700), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D M F VATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF----VATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 273 bits (699), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 79 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 137
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D M F VATRWYRAPE+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMAGF----VATRWYRAPEIML 191
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 192 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 250
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 251 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 310
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 311 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 346
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 273 bits (698), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ FGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DF LAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ D GLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR + T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM------TGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + E R + D+ + L Y E++ + P
Sbjct: 322 DDEPVADPYDQ---SLESRDLLIDEWKSLTYDEVISFVP 357
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT VATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GXVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 85 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 143
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 197
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 198 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 256
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 257 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 316
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 317 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 352
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ D GLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 89 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 147
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 201
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 202 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 260
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 261 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 320
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 321 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 356
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ D GLAR +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 350
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 272 bits (695), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 142/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L IG G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 271 bits (694), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 94 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 152
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 153 HSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 206
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 207 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 265
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 266 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 325
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 326 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 361
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 271 bits (694), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 205/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 90 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 148
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR + T YVATRWYRAPE+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM------TGYVATRWYRAPEIML 202
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 203 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 261
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 262 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 321
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + E R + D+ + L Y E++ + P
Sbjct: 322 DDEPVADPYDQ---SSESRDLLIDEWKSLTYDEVISFVP 357
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 271 bits (694), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 207/339 (61%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 88 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 146
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 200
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 201 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 259
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 260 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 319
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 320 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 355
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 271 bits (693), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 140/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 103 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 161
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D M VATRWYRAPE+
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMX----GXVATRWYRAPEIML 215
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 216 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 274
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 275 ARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 334
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + FE R + D+ + L Y E++ + P
Sbjct: 335 DDEPVADPYDQ---SFESRDLLIDEWKSLTYDEVISFVP 370
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/339 (41%), Positives = 206/339 (60%), Gaps = 12/339 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VCAA DT TG +VA+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K+ LT +H QF +YQ+LR LKY+
Sbjct: 83 VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQK-LTDDHVQFLIYQILRGLKYI 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N + +LK+ DFGL R +D MT YVATRWYRAPE+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEMT----GYVATRWYRAPEIML 195
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG + QL LI L+GTP E + + +E
Sbjct: 196 NWM-HYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSES 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P + F +PLA+ LL++++ D R TA +ALA YF
Sbjct: 255 ARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP 314
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ EP P + E R + D+ + L Y E++ + P
Sbjct: 315 DDEPVADPYDQ---SLESRDLLIDEWKSLTYDEVISFVP 350
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 140/340 (41%), Positives = 206/340 (60%), Gaps = 12/340 (3%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
R + L +G G+YG VC+A D +KVA+KK+ F+ + A R RE++LL+ L+H
Sbjct: 20 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 79
Query: 83 DIVEIKRIMLPPSKRE-FKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+++ + + P + E F ++Y+V LM +DL+ ++K L+ EH QF +YQ+LR LKY
Sbjct: 80 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKY 138
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+A + HRDLKP N+ N +C+L++ DFGLAR A D MT YVATRWYRAPE+
Sbjct: 139 IHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQA--DEEMT----GYVATRWYRAPEIM 192
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
++ Y +DIWS+GCI AE+L GK LFPG + QL I +++GTPSPE +A + +E
Sbjct: 193 LNWM-HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 251
Query: 262 KARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAK 321
AR Y+ + P L F +PLA+ LL R++ D R +A EALA YF
Sbjct: 252 HARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 311
Query: 322 IEREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
E EP +P + E + T ++ +EL Y+E+L + P
Sbjct: 312 PEDEPEAEPYDE---SVEAKERTLEEWKELTYQEVLSFKP 348
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 136/337 (40%), Positives = 206/337 (61%), Gaps = 12/337 (3%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L +G G+YG VC++ D +G K+A+KK+ F+ I A R RE++LL+ ++H +
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
++ + + P S EF D+Y+V LM +DL+ ++K LT +H QF +YQ+LR LKY+
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKYI 170
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A++ HRDLKP N+ N +C+LK+ DFGLAR +D MT YVATRWYRAPE+
Sbjct: 171 HSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEMT----GYVATRWYRAPEIML 224
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ Y +DIWS+GCI AE+LTG+ LFPG ++QL I L GTP I+ + + +
Sbjct: 225 NWM-HYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPSHE 283
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKI 322
AR Y+ + + P F +PLA+ LL++++ D R TA EALA PYF
Sbjct: 284 ARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHDP 343
Query: 323 EREPSCQPISKLEFEFERRRVTKDDIRELIYREILEY 359
+ EP +P + FE R++ ++ + L Y E+ +
Sbjct: 344 DDEPESEPYDQ---SFESRQLEIEEWKRLTYEEVCSF 377
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 264 bits (675), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 205/338 (60%), Gaps = 12/338 (3%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
R + L +G G+YG VC+A D +KVA+KK+ F+ + A R RE++LL+ L+H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 83 DIVEIKRIMLPPSKRE-FKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+++ + + P + E F ++Y+V LM +DL+ ++K+ L+ EH QF +YQ+LR LKY
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA-LSDEHVQFLVYQLLRGLKY 146
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+A + HRDLKP N+ N + +L++ DFGLAR A D MT YVATRWYRAPE+
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA--DEEMT----GYVATRWYRAPEIM 200
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
++ Y +DIWS+GCI AE+L GK LFPG + QL I +++GTPSPE +A + +E
Sbjct: 201 LNWM-HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 259
Query: 262 KARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAK 321
AR Y+ + P L F +PLA+ LL R++ D R +A EALA YF
Sbjct: 260 HARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 319
Query: 322 IEREPSCQPISKLEFEFERRRVTKDDIRELIYREILEY 359
E EP +P + E + T ++ +EL Y+E+L +
Sbjct: 320 PEDEPEAEPYDE---SVEAKERTLEEWKELTYQEVLSF 354
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/338 (40%), Positives = 204/338 (60%), Gaps = 12/338 (3%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
R + L +G G+YG VC+A D +KVA+KK+ F+ + A R RE++LL+ L+H
Sbjct: 28 QRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHE 87
Query: 83 DIVEIKRIMLPPSKRE-FKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+++ + + P + E F ++Y+V LM +DL+ ++K L+ EH QF +YQ+LR LKY
Sbjct: 88 NVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQA-LSDEHVQFLVYQLLRGLKY 146
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+A + HRDLKP N+ N + +L++ DFGLAR A D MT YVATRWYRAPE+
Sbjct: 147 IHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQA--DEEMT----GYVATRWYRAPEIM 200
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
++ Y +DIWS+GCI AE+L GK LFPG + QL I +++GTPSPE +A + +E
Sbjct: 201 LNWM-HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSE 259
Query: 262 KARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAK 321
AR Y+ + P L F +PLA+ LL R++ D R +A EALA YF
Sbjct: 260 HARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 319
Query: 322 IEREPSCQPISKLEFEFERRRVTKDDIRELIYREILEY 359
E EP +P + E + T ++ +EL Y+E+L +
Sbjct: 320 PEDEPEAEPYDE---SVEAKERTLEEWKELTYQEVLSF 354
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 249 bits (637), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 141/379 (37%), Positives = 220/379 (58%), Gaps = 43/379 (11%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL-RLLRHP 82
+Y++++ +GKG+YG+V +ID TGE VA+KKI D F++ +DA R RE+ +L L H
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
+IV + ++ + R D+Y+VF+ ME+DLH VI+AN L H Q+ +YQ+++ +KY+
Sbjct: 70 NIVNLLNVLRADNDR---DVYLVFDYMETDLHAVIRANI-LEPVHKQYVVYQLIKVIKYL 125
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARV------AFSDTPMTV------------ 184
H+ + HRD+KP NIL NA C +KV DFGL+R ++ P+++
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 185 FWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
TDYVATRWYRAPE L GS +KYT ID+WS+GCI E+L GKP+FPG S ++QL+ I
Sbjct: 186 ILTDYVATRWYRAPEILLGS--TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
Query: 244 TDLLGTPSPETIAVVRNEKARKYL------TEMRKKPPVPLFQKFPNV----------DP 287
++ PS E + +++ A+ + E+R+ +F K+ N+ +
Sbjct: 244 IGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNE 303
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDD 347
AL LL +L+ F+P R +A +AL P+ EP+C I + + + + DD
Sbjct: 304 EALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPNCDHIITIPIN-DNVKHSIDD 362
Query: 348 IRELIYREILEYHPQLLKD 366
R L+Y EI +L+ +
Sbjct: 363 YRNLVYSEISRRKRELISN 381
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 135/341 (39%), Positives = 207/341 (60%), Gaps = 18/341 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y+ L+ +G G+YG VC+A+D TG KVAIKK++ F+ A R RE++LL+ +RH ++
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 85 VEIKRIMLP-PSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
+ + + P + +F D Y+V M +DL +++K ++ L + QF +YQML+ L+Y+H
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
A + HRDLKP N+ N +C+LK+ DFGLAR A S+ V TRWYRAPE+ +
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEM------XGXVVTRWYRAPEVILN 199
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
+ +YT +DIWS+GCI AE++TGK LF G + QL I + GTP E + +++++A
Sbjct: 200 WM-RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEA 258
Query: 264 RKY---LTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLA 320
+ Y L E+ KK + N PLA+ LL++++ D + R TA EALA PYF+ L
Sbjct: 259 KNYMKGLPELEKKDFASILT---NASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315
Query: 321 KIEREPSCQPISKLEFEFERRRVTKDDIRELIYREILEYHP 361
E EP Q K + F+ T D+ + + Y+E+L + P
Sbjct: 316 DTEDEPQVQ---KYDDSFDDVDRTLDEWKRVTYKEVLSFKP 353
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 248 bits (632), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 195/332 (58%), Gaps = 12/332 (3%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G+YG VC+AID +GEKVAIKK+ F+ A R RE+ LL+ ++H +++ + +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 91 MLPPSK-REFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYH 149
P S R F D Y+V M++DL +++ + + E Q+ +YQML+ LKY+H+A V H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGM--EFSEEKIQYLVYQMLKGLKYIHSAGVVH 167
Query: 150 RDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N +C+LK+ DFGLAR A D MT YV TRWYRAPE+ S+ Y
Sbjct: 168 RDLKPGNLAVNEDCELKILDFGLARHA--DAEMT----GYVVTRWYRAPEVILSWMH-YN 220
Query: 210 PAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTE 269
+DIWS+GCI AE+LTGK LF GK + QL I + G P E + + ++ A+ Y+
Sbjct: 221 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 280
Query: 270 MRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQ 329
+ + P Q FP P A LL++++ D R TA +AL P+F+ E E Q
Sbjct: 281 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 340
Query: 330 PISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ E ++T D+ ++ IY+EI+ + P
Sbjct: 341 --QPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 370
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 247 bits (630), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 132/332 (39%), Positives = 194/332 (58%), Gaps = 12/332 (3%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G+YG VC+AID +GEKVAIKK+ F+ A R RE+ LL+ ++H +++ + +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 91 MLPPSK-REFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYH 149
P S R F D Y+V M++DL +++ + E Q+ +YQML+ LKY+H+A V H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAGVVH 149
Query: 150 RDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYT 209
RDLKP N+ N +C+LK+ DFGLAR A D MT YV TRWYRAPE+ S+ Y
Sbjct: 150 RDLKPGNLAVNEDCELKILDFGLARHA--DAEMT----GYVVTRWYRAPEVILSWMH-YN 202
Query: 210 PAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTE 269
+DIWS+GCI AE+LTGK LF GK + QL I + G P E + + ++ A+ Y+
Sbjct: 203 QTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS 262
Query: 270 MRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQ 329
+ + P Q FP P A LL++++ D R TA +AL P+F+ E E Q
Sbjct: 263 LPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQ 322
Query: 330 PISKLEFEFERRRVTKDDIRELIYREILEYHP 361
+ E ++T D+ ++ IY+EI+ + P
Sbjct: 323 --QPFDDSLEHEKLTVDEWKQHIYKEIVNFSP 352
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 234 bits (596), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 145/396 (36%), Positives = 203/396 (51%), Gaps = 57/396 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+RY+I +IG GSYG VC A D VAIKKI VFE + D RILRE+ +L L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
+V++ I++P +F ++YVV E+ +SD ++ + LT H + LY +L +KY+
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYV 172
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVA---------------FSDTPMTVF-- 185
H+A + HRDLKP N L N +C +KVCDFGLAR D + F
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 186 -------WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-----------G 227
T +V TRWYRAPEL YT AID+WSIGCIFAE+L
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELI-LLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADR 291
Query: 228 KPLFPGKSVV--------------------HQLDLITDLLGTPSPETIAVVRNEKARKYL 267
PLFPG S QL++I ++LGTPS E I + E A++Y+
Sbjct: 292 GPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYI 351
Query: 268 TEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPS 327
K+ L ++FP A+ LL+R++ F+P R T E LA P+FK + E E +
Sbjct: 352 RIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIAEVETN 411
Query: 328 CQPISKLEFEFERRRVTKDDIRELIYREILEYHPQL 363
+L F + + + +R +EI YHP++
Sbjct: 412 ATEKVRLPFN-DWMNMDEPQLRYAFVKEIQRYHPEI 446
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 219 bits (557), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/389 (33%), Positives = 208/389 (53%), Gaps = 49/389 (12%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+ Y I +IG+GSYG V A D +T + VAIKK++ +FE + D RILRE+ +L L+
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 85
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
I+ + +++P +F ++Y+V E+ +SDL ++ K LT EH + LY +L ++
Sbjct: 86 YIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF----------------- 185
H + + HRDLKP N L N +C +KVCDFGLAR S+ +
Sbjct: 146 HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLK 205
Query: 186 --WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL----------TGK-PLFP 232
T +V TRWYRAPEL YT +IDIWS GCIFAE+L T + PLFP
Sbjct: 206 KQLTSHVVTRWYRAPELI-LLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFP 264
Query: 233 GKSV-----------VH------QLDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPP 275
G S VH QL++I +++GTP+ + + + + KY+ + P
Sbjct: 265 GSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKP 324
Query: 276 VPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLE 335
+ L QK+P++ + LL+ ++ F+P R T ++AL PY K + K + E L
Sbjct: 325 INLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKKKLENFSTKKIILP 384
Query: 336 FEFERRRVTKDDIRELIYREILEYHPQLL 364
F+ + +++ +R + +E+ +HP+L+
Sbjct: 385 FD-DWMVLSETQLRYIFLKEVQSFHPELV 412
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 217 bits (553), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 128/372 (34%), Positives = 205/372 (55%), Gaps = 28/372 (7%)
Query: 6 TKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+K ++ ++ + E D+ RY+ L+ IG G+ G+VCAA DT G VA+KK+ F
Sbjct: 2 SKSKVDNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF 61
Query: 61 EHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKA 119
++ + A R RE+ LL+ + H +I+ + + P + EF+D+Y+V ELM+++L QVI
Sbjct: 62 QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM 121
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
+L E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A ++
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 179
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
M T YV TR+YRAPE+ Y +DIWS+GCI E++ G +F G + Q
Sbjct: 180 FMM----TPYVVTRYYRAPEVILGM--GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQ 233
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DP 287
+ + + LGTPS E +A ++ R Y+ K P + + FP+
Sbjct: 234 WNKVIEQLGTPSAEFMAALQ-PTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTS 292
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDD 347
A LL +++ DP R + +EAL PY + E P + + E R ++
Sbjct: 293 QARDLLSKMLVIDPDKRISVDEALRHPYIT-VWYDPAEAEAPPPQIYDAQLEEREHAIEE 351
Query: 348 IRELIYREILEY 359
+ELIY+E++++
Sbjct: 352 WKELIYKEVMDW 363
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 216 bits (549), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 202/367 (55%), Gaps = 29/367 (7%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + Q + +
Sbjct: 183 ---TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALR 291
+ LGTPSPE + ++ R Y+ K + FP+V A
Sbjct: 238 IEQLGTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIREL 351
LL +++ D R + +EAL PY + E P + + + R T ++ +EL
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKEL 355
Query: 352 IYREILE 358
IY+E+++
Sbjct: 356 IYKEVMD 362
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 214 bits (545), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 130/367 (35%), Positives = 202/367 (55%), Gaps = 29/367 (7%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + Q + +
Sbjct: 183 ---TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALR 291
+ LGTPSPE + ++ R Y+ K + FP+V A
Sbjct: 238 IEQLGTPSPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIREL 351
LL +++ D R + +EAL PY + E P + + + R T ++ +EL
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKEL 355
Query: 352 IYREILE 358
IY+E+++
Sbjct: 356 IYKEVMD 362
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 214 bits (544), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 124/348 (35%), Positives = 193/348 (55%), Gaps = 23/348 (6%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
RY+ L+ IG G+ G+VCAA DT G VA+KK+ F++ + A R RE+ LL+ + H +
Sbjct: 23 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKN 82
Query: 84 IVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
I+ + + P + EF+D+Y+V ELM+++L QVI +L E + LYQML +K++
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHL 140
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+A + HRDLKP NI+ ++C LK+ DFGLAR A ++ M T YV TR+YRAPE+
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMM----TPYVVTRYYRAPEVIL 196
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
Y +DIWS+GCI E++ G +F G + Q + + + LGTPS E +A ++
Sbjct: 197 GM--GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ-PT 253
Query: 263 ARKYLTEMRKKPPVPLFQKFPNV------------DPLALRLLQRLIAFDPKDRPTAEEA 310
R Y+ P + + FP+ A LL +++ DP R + +EA
Sbjct: 254 VRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEA 313
Query: 311 LADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRELIYREILE 358
L PY + E P + + E R ++ +ELIY+E+++
Sbjct: 314 LRHPYIT-VWYDPAEAEAPPPQIYDAQLEEREHAIEEWKELIYKEVMD 360
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 206/368 (55%), Gaps = 31/368 (8%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++++ H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++ LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + Q + +
Sbjct: 183 ---TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQK-FPNV------------DPLAL 290
+ LGTPSPE + ++ R Y+ E R K F+K FP+V A
Sbjct: 238 IEQLGTPSPEFMKKLQ-PTVRTYV-ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR 295
Query: 291 RLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRE 350
LL +++ D R + +EAL PY + E P + + + R T ++ +E
Sbjct: 296 DLLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKE 354
Query: 351 LIYREILE 358
LIY+E+++
Sbjct: 355 LIYKEVMD 362
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 206/368 (55%), Gaps = 31/368 (8%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++++ H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++ LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + Q + +
Sbjct: 183 ---TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQK-FPNV------------DPLAL 290
+ LGTPSPE + ++ R Y+ E R K F+K FP+V A
Sbjct: 238 IEQLGTPSPEFMKKLQ-PTVRTYV-ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR 295
Query: 291 RLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRE 350
LL +++ D R + +EAL PY + E P + + + R T ++ +E
Sbjct: 296 DLLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKE 354
Query: 351 LIYREILE 358
LIY+E+++
Sbjct: 355 LIYKEVMD 362
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 201/367 (54%), Gaps = 29/367 (7%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 7 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 66
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 67 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--EL 124
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 125 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 183
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + Q + +
Sbjct: 184 ---TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 238
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALR 291
+ LGTP PE + ++ R Y+ K + FP+V A
Sbjct: 239 IEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 297
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIREL 351
LL +++ D R + +EAL PY + E P + + + R T ++ +EL
Sbjct: 298 LLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKEL 356
Query: 352 IYREILE 358
IY+E+++
Sbjct: 357 IYKEVMD 363
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 129/367 (35%), Positives = 201/367 (54%), Gaps = 29/367 (7%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + Q + +
Sbjct: 183 ---TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALR 291
+ LGTP PE + ++ R Y+ K + FP+V A
Sbjct: 238 IEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIREL 351
LL +++ D R + +EAL PY + E P + + + R T ++ +EL
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKEL 355
Query: 352 IYREILE 358
IY+E+++
Sbjct: 356 IYKEVMD 362
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 133/368 (36%), Positives = 205/368 (55%), Gaps = 31/368 (8%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++ LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T YV TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + Q + +
Sbjct: 183 ---TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQK-FPNV------------DPLAL 290
+ LGTPSPE + ++ R Y+ E R K F+K FP+V A
Sbjct: 238 IEQLGTPSPEFMKKLQ-PTVRTYV-ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR 295
Query: 291 RLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRE 350
LL +++ D R + +EAL PY + E P + + + R T ++ +E
Sbjct: 296 DLLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKE 354
Query: 351 LIYREILE 358
LIY+E+++
Sbjct: 355 LIYKEVMD 362
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 209/388 (53%), Gaps = 34/388 (8%)
Query: 4 DQTKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHD 58
+ +K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+
Sbjct: 38 NMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR 97
Query: 59 VFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVI 117
F++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI
Sbjct: 98 PFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI 157
Query: 118 KANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAF 177
+ +L E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A
Sbjct: 158 QM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
Query: 178 SDTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+ M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ +
Sbjct: 216 TSFMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYI 269
Query: 238 HQLDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------ 285
Q + + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 270 DQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 328
Query: 286 DPLALRLLQRLIAFDPKDRPTAEEALADPYFKGL---AKIEREPSCQPISKLEFEFERRR 342
A LL +++ DP R + ++AL PY A++E P + + + R
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP----QIYDKQLDERE 384
Query: 343 VTKDDIRELIYREILEYHPQLLKDYING 370
T ++ +ELIY+E++ + + G
Sbjct: 385 HTIEEWKELIYKEVMNSEEKTKNGVVKG 412
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 211 bits (536), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 130/379 (34%), Positives = 203/379 (53%), Gaps = 29/379 (7%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 8 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 67
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 68 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--EL 125
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 126 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMV 185
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
F V TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + Q + +
Sbjct: 186 PF----VVTRYYRAPEVI--LGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 239
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALR 291
+ LGTP PE + ++ R Y+ K + FP+V A
Sbjct: 240 IEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 298
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIREL 351
LL +++ D R + +EAL PY + E P + + + R T ++ +EL
Sbjct: 299 LLSKMLVIDASKRISVDEALQHPYIN-VWYDPSEAEAPPPKIPDKQLDEREHTIEEWKEL 357
Query: 352 IYREILEYHPQLLKDYING 370
IY+E+++ + I G
Sbjct: 358 IYKEVMDLEERTKNGVIRG 376
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 211 bits (536), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 128/367 (34%), Positives = 202/367 (55%), Gaps = 29/367 (7%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 11 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 70
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 71 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--EL 128
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 129 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 187
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T YV TR+YRAPE+ Y +D+WS+GCI E++ K LFPG+ + Q + +
Sbjct: 188 ---TPYVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKV 242
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALR 291
+ LGTP PE + ++ R Y+ K + FP+V A
Sbjct: 243 IEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 301
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIREL 351
LL +++ D R + +EAL PY + E P + + + R T ++ +EL
Sbjct: 302 LLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKEL 360
Query: 352 IYREILE 358
IY+E+++
Sbjct: 361 IYKEVMD 367
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 211 bits (536), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 128/388 (32%), Positives = 209/388 (53%), Gaps = 34/388 (8%)
Query: 4 DQTKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHD 58
+ +K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+
Sbjct: 38 NMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR 97
Query: 59 VFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVI 117
F++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI
Sbjct: 98 PFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI 157
Query: 118 KANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAF 177
+ +L E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A
Sbjct: 158 QM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG 215
Query: 178 SDTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+ M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ +
Sbjct: 216 TSFMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYI 269
Query: 238 HQLDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------ 285
Q + + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 270 DQWNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK 328
Query: 286 DPLALRLLQRLIAFDPKDRPTAEEALADPYFKGL---AKIEREPSCQPISKLEFEFERRR 342
A LL +++ DP R + ++AL PY A++E P + + + R
Sbjct: 329 ASQARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP----QIYDKQLDERE 384
Query: 343 VTKDDIRELIYREILEYHPQLLKDYING 370
T ++ +ELIY+E++ + + G
Sbjct: 385 HTIEEWKELIYKEVMNSEEKTKNGVVKG 412
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 210 bits (535), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 201/366 (54%), Gaps = 29/366 (7%)
Query: 12 DKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISD 65
D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 1 DNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTH 60
Query: 66 AIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLT 124
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 61 AKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--ELD 118
Query: 125 REHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 176
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLIT 244
T YV TR+YRAPE+ Y +D+WS+GCI E++ K LFPG+ + Q + +
Sbjct: 177 --TPYVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 232
Query: 245 DLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALRL 292
+ LGTP PE + ++ R Y+ K + FP+V A L
Sbjct: 233 EQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 291
Query: 293 LQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRELI 352
L +++ D R + +EAL PY + E P + + + R T ++ +ELI
Sbjct: 292 LSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKELI 350
Query: 353 YREILE 358
Y+E+++
Sbjct: 351 YKEVMD 356
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 205/374 (54%), Gaps = 34/374 (9%)
Query: 6 TKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F
Sbjct: 3 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 62
Query: 61 EHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKA 119
++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+
Sbjct: 63 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 122
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
+L E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A +
Sbjct: 123 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q
Sbjct: 181 FMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DP 287
+ + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 235 WNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 293
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGL---AKIEREPSCQPISKLEFEFERRRVT 344
A LL +++ DP R + ++AL PY A++E P + + + R T
Sbjct: 294 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP----QIYDKQLDEREHT 349
Query: 345 KDDIRELIYREILE 358
++ +ELIY+E++
Sbjct: 350 IEEWKELIYKEVMN 363
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 205/374 (54%), Gaps = 34/374 (9%)
Query: 6 TKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 61 EHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKA 119
++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 121
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
+L E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A +
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q
Sbjct: 180 FMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DP 287
+ + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGL---AKIEREPSCQPISKLEFEFERRRVT 344
A LL +++ DP R + ++AL PY A++E P + + + R T
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP----QIYDKQLDEREHT 348
Query: 345 KDDIRELIYREILE 358
++ +ELIY+E++
Sbjct: 349 IEEWKELIYKEVMN 362
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 205/374 (54%), Gaps = 34/374 (9%)
Query: 6 TKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 61 EHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKA 119
++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 121
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
+L E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A +
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q
Sbjct: 180 FMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DP 287
+ + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGL---AKIEREPSCQPISKLEFEFERRRVT 344
A LL +++ DP R + ++AL PY A++E P + + + R T
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP----QIYDKQLDEREHT 348
Query: 345 KDDIRELIYREILE 358
++ +ELIY+E++
Sbjct: 349 IEEWKELIYKEVMN 362
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 205/374 (54%), Gaps = 34/374 (9%)
Query: 6 TKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F
Sbjct: 1 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 60
Query: 61 EHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKA 119
++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+
Sbjct: 61 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 120
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
+L E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A +
Sbjct: 121 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 178
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q
Sbjct: 179 FMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 232
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DP 287
+ + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 233 WNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 291
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGL---AKIEREPSCQPISKLEFEFERRRVT 344
A LL +++ DP R + ++AL PY A++E P + + + R T
Sbjct: 292 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP----QIYDKQLDEREHT 347
Query: 345 KDDIRELIYREILE 358
++ +ELIY+E++
Sbjct: 348 IEEWKELIYKEVMN 361
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 127/374 (33%), Positives = 205/374 (54%), Gaps = 34/374 (9%)
Query: 6 TKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F
Sbjct: 3 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 62
Query: 61 EHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKA 119
++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+
Sbjct: 63 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 122
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
+L E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A +
Sbjct: 123 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 180
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q
Sbjct: 181 FMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 234
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DP 287
+ + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 235 WNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 293
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGL---AKIEREPSCQPISKLEFEFERRRVT 344
A LL +++ DP R + ++AL PY A++E P + + + R T
Sbjct: 294 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP----QIYDKQLDEREHT 349
Query: 345 KDDIRELIYREILE 358
++ +ELIY+E++
Sbjct: 350 IEEWKELIYKEVMN 363
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 205/368 (55%), Gaps = 31/368 (8%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++++ H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++ LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T YV TR+YRAPE+ Y +DIWS+G I E++ G LFPG + Q + +
Sbjct: 183 ---TPYVVTRYYRAPEVILGM--GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQK-FPNV------------DPLAL 290
+ LGTPSPE + ++ R Y+ E R K F+K FP+V A
Sbjct: 238 IEQLGTPSPEFMKKLQ-PTVRTYV-ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR 295
Query: 291 RLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRE 350
LL +++ D R + +EAL PY + E P + + + R T ++ +E
Sbjct: 296 DLLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKE 354
Query: 351 LIYREILE 358
LIY+E+++
Sbjct: 355 LIYKEVMD 362
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 202/369 (54%), Gaps = 35/369 (9%)
Query: 12 DKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISD 65
D F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 1 DNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTH 60
Query: 66 AIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLT 124
A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 61 AKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELD 118
Query: 125 REHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 119 HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM-- 176
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLIT 244
T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q + +
Sbjct: 177 --TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVI 232
Query: 245 DLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALRL 292
+ LGTP PE + ++ R Y+ K + + FP+ A L
Sbjct: 233 EQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 291
Query: 293 LQRLIAFDPKDRPTAEEALADPYFKGL---AKIEREPSCQPISKLEFEFERRRVTKDDIR 349
L +++ DP R + ++AL PY A++E P + + + R T ++ +
Sbjct: 292 LSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP----QIYDKQLDEREHTIEEWK 347
Query: 350 ELIYREILE 358
ELIY+E++
Sbjct: 348 ELIYKEVMN 356
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 127/392 (32%), Positives = 204/392 (52%), Gaps = 52/392 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+ Y+I +IG+GSYG V A D + + VAIKK++ +FE + D RILRE+ +L L+
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSD 87
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
I+ + +++P +F ++Y+V E+ +SDL ++ K LT +H + LY +L K++
Sbjct: 88 YIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFI 147
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF----------------- 185
H + + HRDLKP N L N +C +K+CDFGLAR SD + +
Sbjct: 148 HESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNK 207
Query: 186 -----WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-----------P 229
T +V TRWYRAPEL YT +IDIWS GCIFAE+L P
Sbjct: 208 NLKKQLTSHVVTRWYRAPELI-LLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFP 266
Query: 230 LFPGKSV-----------VH------QLDLITDLLGTPSPETIAVVRNEKARKYLTEMRK 272
LFPG S VH QL++I +++GTP E + + ++ KY+
Sbjct: 267 LFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIKLFPT 326
Query: 273 KPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPIS 332
+ + L +K+ ++ + LL+ ++ F+ + R T ++AL+ PY K + K E
Sbjct: 327 RDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKDVRKENLENFSTEKI 386
Query: 333 KLEFEFERRRVTKDDIRELIYREILEYHPQLL 364
L F+ + +++ +R + +EI +H L+
Sbjct: 387 ILPFD-DWMVLSETQLRYIFLKEIQSFHADLI 417
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 209 bits (531), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 132/368 (35%), Positives = 204/368 (55%), Gaps = 31/368 (8%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T V TR+YRAPE+ Y +DIWS+GCI E++ G LFPG + Q + +
Sbjct: 183 ---TPEVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQK-FPNV------------DPLAL 290
+ LGTP PE + ++ R Y+ E R K F+K FP+V A
Sbjct: 238 IEQLGTPCPEFMKKLQ-PTVRTYV-ENRPKYAGYSFEKLFPDVLFPADSEHNALKASQAR 295
Query: 291 RLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRE 350
LL +++ D R + +EAL PY + E P + + + R T ++ +E
Sbjct: 296 DLLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKE 354
Query: 351 LIYREILE 358
LIY+E+++
Sbjct: 355 LIYKEVMD 362
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 208 bits (529), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 199/365 (54%), Gaps = 34/365 (9%)
Query: 15 FFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI 69
+ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ + A R
Sbjct: 4 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 63
Query: 70 LREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHH 128
RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+ +L E
Sbjct: 64 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERM 121
Query: 129 QFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTD 188
+ LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M T
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM----TP 177
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLG 248
YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q + + + LG
Sbjct: 178 YVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 235
Query: 249 TPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALRLLQRL 296
TP PE + ++ R Y+ K + + FP+ A LL ++
Sbjct: 236 TPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294
Query: 297 IAFDPKDRPTAEEALADPYFKGL---AKIEREPSCQPISKLEFEFERRRVTKDDIRELIY 353
+ DP R + ++AL PY A++E P + + + R T ++ +ELIY
Sbjct: 295 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP----QIYDKQLDEREHTIEEWKELIY 350
Query: 354 REILE 358
+E++
Sbjct: 351 KEVMN 355
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 126/365 (34%), Positives = 199/365 (54%), Gaps = 34/365 (9%)
Query: 15 FFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI 69
+ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ + A R
Sbjct: 5 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 64
Query: 70 LREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHH 128
RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+ +L E
Sbjct: 65 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM--ELDHERM 122
Query: 129 QFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTD 188
+ LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M T
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM----TP 178
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLG 248
YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q + + + LG
Sbjct: 179 YVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 236
Query: 249 TPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALRLLQRL 296
TP PE + ++ R Y+ K + + FP+ A LL ++
Sbjct: 237 TPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 295
Query: 297 IAFDPKDRPTAEEALADPYFKGL---AKIEREPSCQPISKLEFEFERRRVTKDDIRELIY 353
+ DP R + ++AL PY A++E P + + + R T ++ +ELIY
Sbjct: 296 LVIDPAKRISVDDALQHPYINVWYDPAEVEAPPP----QIYDKQLDEREHTIEEWKELIY 351
Query: 354 REILE 358
+E++
Sbjct: 352 KEVMN 356
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 207 bits (528), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 202/371 (54%), Gaps = 28/371 (7%)
Query: 6 TKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 61 EHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKA 119
++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM 121
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
+L E + LYQML +K++H+A + HRDLKP NI+ ++ LK+ DFGLAR A +
Sbjct: 122 --ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q
Sbjct: 180 FMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DP 287
+ + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDD 347
A LL +++ DP R + ++AL PY + E P + + + R T ++
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI-NVWYDPAEVEAPPPQIYDKQLDEREHTIEE 351
Query: 348 IRELIYREILE 358
+ELIY+E++
Sbjct: 352 WKELIYKEVMN 362
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 207 bits (527), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 125/371 (33%), Positives = 202/371 (54%), Gaps = 28/371 (7%)
Query: 6 TKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 61 EHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKA 119
++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+
Sbjct: 62 QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM 121
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
+L E + LYQML +K++H+A + HRDLKP NI+ ++ LK+ DFGLAR A +
Sbjct: 122 --ELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q
Sbjct: 180 FMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DP 287
+ + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDD 347
A LL +++ DP R + ++AL PY + E P + + + R T ++
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI-NVWYDPAEVEAPPPQIYDKQLDEREHTIEE 351
Query: 348 IRELIYREILE 358
+ELIY+E++
Sbjct: 352 WKELIYKEVMN 362
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 204/368 (55%), Gaps = 31/368 (8%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+V AA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++++ H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++ LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
T YV TR+YRAPE+ Y +DIWS+G I E++ G LFPG + Q + +
Sbjct: 183 ---TPYVVTRYYRAPEVILGM--GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQK-FPNV------------DPLAL 290
+ LGTPSPE + ++ R Y+ E R K F+K FP+V A
Sbjct: 238 IEQLGTPSPEFMKKLQ-PTVRTYV-ENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQAR 295
Query: 291 RLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRE 350
LL +++ D R + +EAL PY + E P + + + R T ++ +E
Sbjct: 296 DLLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKE 354
Query: 351 LIYREILE 358
LIY+E+++
Sbjct: 355 LIYKEVMD 362
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 176/330 (53%), Gaps = 24/330 (7%)
Query: 5 QTKKELKDKDFFTE-YGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHI 63
Q K E +D E + + Y + I GSYG VCA +D+ G VAIK+ VF +
Sbjct: 3 QAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKR---VFNTV 58
Query: 64 SDA------------IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES 111
SD R+LRE++LL HP+I+ ++ I + + +Y+V ELM +
Sbjct: 59 SDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT 118
Query: 112 DLHQVIKAND-DLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDF 170
DL QVI ++ +H Q+F+Y +L L +H A V HRDL P NIL N + +CDF
Sbjct: 119 DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF 178
Query: 171 GLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPL 230
LAR +D T YV RWYRAPEL F +T +D+WS GC+ AE+ K L
Sbjct: 179 NLAREDTADANKT----HYVTHRWYRAPELVMQF-KGFTKLVDMWSAGCVMAEMFNRKAL 233
Query: 231 FPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYL-TEMRKKPPVPLFQKFPNVDPLA 289
F G + +QL+ I +++GTP E + + + AR YL + P P DP+A
Sbjct: 234 FRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVA 293
Query: 290 LRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
L L+ +++ F+P+ R + E+AL PYF+ L
Sbjct: 294 LDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 176/330 (53%), Gaps = 24/330 (7%)
Query: 5 QTKKELKDKDFFTE-YGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHI 63
Q K E +D E + + Y + I GSYG VCA +D+ G VAIK+ VF +
Sbjct: 3 QAKGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKR---VFNTV 58
Query: 64 SDA------------IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES 111
SD R+LRE++LL HP+I+ ++ I + + +Y+V ELM +
Sbjct: 59 SDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT 118
Query: 112 DLHQVIKAND-DLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDF 170
DL QVI ++ +H Q+F+Y +L L +H A V HRDL P NIL N + +CDF
Sbjct: 119 DLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDF 178
Query: 171 GLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPL 230
LAR +D T YV RWYRAPEL F +T +D+WS GC+ AE+ K L
Sbjct: 179 NLAREDTADANKT----HYVTHRWYRAPELVMQF-KGFTKLVDMWSAGCVMAEMFNRKAL 233
Query: 231 FPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYL-TEMRKKPPVPLFQKFPNVDPLA 289
F G + +QL+ I +++GTP E + + + AR YL + P P DP+A
Sbjct: 234 FRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVA 293
Query: 290 LRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
L L+ +++ F+P+ R + E+AL PYF+ L
Sbjct: 294 LDLIAKMLEFNPQRRISTEQALRHPYFESL 323
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 200/367 (54%), Gaps = 29/367 (7%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
V TR+YRAPE+ Y +D+WS+GCI E++ K LFPG+ + Q + +
Sbjct: 183 ---EPEVVTRYYRAPEVILGM--GYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALR 291
+ LGTP PE + ++ R Y+ K + FP+V A
Sbjct: 238 IEQLGTPCPEFMKKLQ-PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIREL 351
LL +++ D R + +EAL PY + E P + + + R T ++ +EL
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKEL 355
Query: 352 IYREILE 358
IY+E+++
Sbjct: 356 IYKEVMD 362
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 124/362 (34%), Positives = 196/362 (54%), Gaps = 28/362 (7%)
Query: 15 FFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI 69
+ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ + A R
Sbjct: 4 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRA 63
Query: 70 LREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDLTREHH 128
RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+ +L E
Sbjct: 64 YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM--ELDHERM 121
Query: 129 QFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTD 188
+ LYQML +K++H+A + HRDLKP NI+ ++ LK+ DFGLAR A + M T
Sbjct: 122 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMM----TP 177
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLG 248
YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q + + + LG
Sbjct: 178 YVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLG 235
Query: 249 TPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALRLLQRL 296
TP PE + ++ R Y+ K + + FP+ A LL ++
Sbjct: 236 TPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKM 294
Query: 297 IAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIRELIYREI 356
+ DP R + ++AL PY + E P + + + R T ++ +ELIY+E+
Sbjct: 295 LVIDPAKRISVDDALQHPYI-NVWYDPAEVEAPPPQIYDKQLDEREHTIEEWKELIYKEV 353
Query: 357 LE 358
+
Sbjct: 354 MN 355
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 204 bits (520), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 126/367 (34%), Positives = 199/367 (54%), Gaps = 29/367 (7%)
Query: 11 KDKDFFT-EYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS 64
+D +F++ E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F++ +
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKANDDL 123
A R RE+ L++ + H +I+ + + P S EF+D+Y+V ELM+++L QVI+ +L
Sbjct: 66 HAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM--EL 123
Query: 124 TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
E + LYQML +K++H+A + HRDLKP NI+ ++C LK+ DFGLAR A + M
Sbjct: 124 DHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM- 182
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
V TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q + +
Sbjct: 183 ---EPEVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKV 237
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DPLALR 291
+ LGTP P + ++ R Y+ K + FP+V A
Sbjct: 238 IEQLGTPCPAFMKKLQ-PTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARD 296
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDDIREL 351
LL +++ D R + +EAL PY + E P + + + R T ++ +EL
Sbjct: 297 LLSKMLVIDASKRISVDEALQHPYI-NVWYDPSEAEAPPPKIPDKQLDEREHTIEEWKEL 355
Query: 352 IYREILE 358
IY+E+++
Sbjct: 356 IYKEVMD 362
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 124/371 (33%), Positives = 201/371 (54%), Gaps = 37/371 (9%)
Query: 6 TKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 61 EHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKA 119
++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQM 121
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
+L E + LYQML +K++H+A + HRDLKP NI+ ++ LK+ DFGLAR A +
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q
Sbjct: 180 FMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DP 287
+ + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDD 347
A LL +++ DP R + ++AL PY + +P+ + R T ++
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYI----NVWYDPAXXXXX------DEREHTIEE 342
Query: 348 IRELIYREILE 358
+ELIY+E++
Sbjct: 343 WKELIYKEVMN 353
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 201 bits (510), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 121/313 (38%), Positives = 175/313 (55%), Gaps = 29/313 (9%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
+RY L+ +G G G+V +A+D ++VAIKKI V LRE+K++R L H
Sbjct: 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI--VLTDPQSVKHALREIKIIRRLDH 67
Query: 82 PDIVEIKRIMLPPSKR---------EFKDIYVVFELMESDLHQVIKANDDLTREHHQFFL 132
+IV++ I+ P + E +Y+V E ME+DL V++ L EH + F+
Sbjct: 68 DNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP-LLEEHARLFM 126
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA-NCKLKVCDFGLARVAFSDTPMTVFWTDYVA 191
YQ+LR LKY+H+ANV HRDLKP N+ N + LK+ DFGLAR+ ++ +
Sbjct: 127 YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV 186
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
T+WYR+P L S + YT AID+W+ GCIFAE+LTGK LF G + Q+ LI
Sbjct: 187 TKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL------- 238
Query: 252 PETIAVVRNEKARKYLTEM-------RKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDR 304
E+I VV E ++ L+ + +P PL Q P + A+ L++++ F P DR
Sbjct: 239 -ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDR 297
Query: 305 PTAEEALADPYFK 317
TAEEAL+ PY
Sbjct: 298 LTAEEALSHPYMS 310
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 123/371 (33%), Positives = 197/371 (53%), Gaps = 39/371 (10%)
Query: 6 TKKELKDKDFFTEYGDAN-----RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+K ++ ++ + E GD+ RY+ L+ IG G+ G+VCAA D VAIKK+ F
Sbjct: 2 SKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 61
Query: 61 EHISDAIRILREVKLLRLLRHPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVIKA 119
++ + A R RE+ L++ + H +I+ + + P + EF+D+Y+V ELM+++L QVI+
Sbjct: 62 QNQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM 121
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
+L E + LYQML +K++H+A + HRDLKP NI+ ++ LK+ DFGLAR A +
Sbjct: 122 --ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTS 179
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
M T YV TR+YRAPE+ Y +DIWS+GCI E++ K LFPG+ + Q
Sbjct: 180 FMM----TPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNV------------DP 287
+ + + LGTP PE + ++ R Y+ K + + FP+
Sbjct: 234 WNKVIEQLGTPCPEFMKKLQ-PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 292
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQPISKLEFEFERRRVTKDD 347
A LL +++ DP R + ++AL PY + R T ++
Sbjct: 293 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYXXXX------------XXDEREHTIEE 340
Query: 348 IRELIYREILE 358
+ELIY+E++
Sbjct: 341 WKELIYKEVMN 351
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 173/305 (56%), Gaps = 20/305 (6%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G +Y+ LE +G+G+YGVV A D+ G VA+K+I E +RE+ LL+ L
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAND-DLTREHHQFFLYQMLRA 138
HP+IV + ++ + + +VFE ME DL +V+ N L + +LYQ+LR
Sbjct: 77 HHPNIVSLIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
+ + H + HRDLKP+N+L N++ LK+ DFGLAR AF P+ + T V T WYRAP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFG-IPVRSY-THEVVTLWYRAP 188
Query: 199 E-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAV 257
+ L GS KY+ ++DIWSIGCIFAE++TGKPLFPG + QL I +LGTP+P
Sbjct: 189 DVLMGS--KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246
Query: 258 VRN---EKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
V+ K R + +K P P + LL ++ FDP R +A +A+ P
Sbjct: 247 VQELPLWKQRTFQVFEKK----PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHP 302
Query: 315 YFKGL 319
YFK L
Sbjct: 303 YFKDL 307
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/305 (40%), Positives = 173/305 (56%), Gaps = 20/305 (6%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G +Y+ LE +G+G+YGVV A D+ G VA+K+I E +RE+ LL+ L
Sbjct: 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKEL 76
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN-DDLTREHHQFFLYQMLRA 138
HP+IV + ++ + + +VFE ME DL +V+ N L + +LYQ+LR
Sbjct: 77 HHPNIVSLIDVI-----HSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRG 131
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
+ + H + HRDLKP+N+L N++ LK+ DFGLAR AF P+ + T V T WYRAP
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLAR-AFG-IPVRSY-THEVVTLWYRAP 188
Query: 199 E-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAV 257
+ L GS KY+ ++DIWSIGCIFAE++TGKPLFPG + QL I +LGTP+P
Sbjct: 189 DVLMGS--KKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQ 246
Query: 258 VRN---EKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
V+ K R + +K P P + LL ++ FDP R +A +A+ P
Sbjct: 247 VQELPLWKQRTFQVFEKK----PWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHP 302
Query: 315 YFKGL 319
YFK L
Sbjct: 303 YFKDL 307
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 184 bits (467), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 112/304 (36%), Positives = 175/304 (57%), Gaps = 16/304 (5%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y+ + IG+GSYGVV + TG+ VAIKK + + LRE+++L+ L+HP+
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
+V + + R + +++VFE + + LH++ + + + +Q L+A+ +
Sbjct: 64 LVNLLEVF-----RRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFC 118
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H N HRD+KP+NIL + +K+CDFG AR+ T + ++ D VATRWYR+PEL
Sbjct: 119 HKHNCIHRDVKPENILITKHSVIKLCDFGFARLL---TGPSDYYDDEVATRWYRSPELLV 175
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++Y P +D+W+IGC+FAE+L+G PL+PGKS V QL LI LG P V
Sbjct: 176 GD-TQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF---S 231
Query: 263 ARKYLTEMRKKPP---VPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
+Y + ++ P PL KFPN+ AL LL+ + DP +R T E+ L PYF+ +
Sbjct: 232 TNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENI 291
Query: 320 AKIE 323
+IE
Sbjct: 292 REIE 295
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 179 bits (454), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 174/316 (55%), Gaps = 19/316 (6%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA-IRILREVKLLRLLRHPD 83
Y L+ +G+G+Y V T VA+K+I EH A +REV LL+ L+H +
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIR--LEHEEGAPCTAIREVSLLKDLKHAN 61
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHH-QFFLYQMLRALKYM 142
IV + I+ K + +VFE ++ DL Q + ++ H+ + FL+Q+LR L Y
Sbjct: 62 IVTLHDII-----HTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L N +LK+ DFGLAR + + T + + V T WYR P+ L
Sbjct: 117 HRQKVLHRDLKPQNLLINERGELKLADFGLAR---AKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI-AVVRN 260
GS + Y+ ID+W +GCIF E+ TG+PLFPG +V QL I +LGTP+ ET ++ N
Sbjct: 174 GS--TDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN 231
Query: 261 EKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLA 320
E+ + Y K L P +D LL +L+ F+ ++R +AE+A+ P+F L
Sbjct: 232 EEFKTY--NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLG 289
Query: 321 -KIEREPSCQPISKLE 335
+I + P I L+
Sbjct: 290 ERIHKLPDTTSIFALK 305
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 174 bits (441), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 117/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 224
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 225 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 282 ALAHPFFQDVTK 293
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 174 bits (440), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 164/296 (55%), Gaps = 15/296 (5%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y LE IG+G+YGVV A + + GE A+KKI E +RE+ +L+ L+H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIK-ANDDLTREHHQFFLYQMLRALKYM 142
IV++ ++ K + +VFE ++ DL +++ L + FL Q+L + Y
Sbjct: 62 IVKLYDVI-----HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L N +LK+ DFGLAR AF P+ + T V T WYRAP+ L
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFG-IPVRKY-THEVVTLWYRAPDVLM 173
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
GS KY+ IDIWS+GCIFAE++ G PLFPG S QL I +LGTP+ + V
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT-- 229
Query: 262 KARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
+ KY P+P +D + LL +++ DP R TA++AL YFK
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 164/296 (55%), Gaps = 15/296 (5%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y LE IG+G+YGVV A + + GE A+KKI E +RE+ +L+ L+H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIK-ANDDLTREHHQFFLYQMLRALKYM 142
IV++ ++ K + +VFE ++ DL +++ L + FL Q+L + Y
Sbjct: 62 IVKLYDVI-----HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L N +LK+ DFGLAR AF P+ + T V T WYRAP+ L
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFG-IPVRKY-THEVVTLWYRAPDVLM 173
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
GS KY+ IDIWS+GCIFAE++ G PLFPG S QL I +LGTP+ + V
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVT-- 229
Query: 262 KARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
+ KY P+P +D + LL +++ DP R TA++AL YFK
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 175/311 (56%), Gaps = 29/311 (9%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
D ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 5 DMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRA 138
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 65 HPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAP
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAP 176
Query: 199 E-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAV 257
E L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 177 EILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------- 227
Query: 258 VRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
+E +T M KP P + + P +D LL +++ +DP R +A+ A
Sbjct: 228 --DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 285
Query: 311 LADPYFKGLAK 321
LA P+F+ + K
Sbjct: 286 LAHPFFQDVTK 296
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/296 (38%), Positives = 164/296 (55%), Gaps = 15/296 (5%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y LE IG+G+YGVV A + + GE A+KKI E +RE+ +L+ L+H +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIK-ANDDLTREHHQFFLYQMLRALKYM 142
IV++ ++ K + +VFE ++ DL +++ L + FL Q+L + Y
Sbjct: 62 IVKLYDVI-----HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H V HRDLKP+N+L N +LK+ DFGLAR AF P+ + T + T WYRAP+ L
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLAR-AFG-IPVRKY-THEIVTLWYRAPDVLM 173
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
GS KY+ IDIWS+GCIFAE++ G PLFPG S QL I +LGTP+ + V
Sbjct: 174 GS--KKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVT-- 229
Query: 262 KARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
+ KY P+P +D + LL +++ DP R TA++AL YFK
Sbjct: 230 ELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 224
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 225 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 282 ALAHPFFQDVTK 293
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 225
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 226 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 282
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 283 ALAHPFFQDVTK 294
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 226
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 227 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 284 ALAHPFFQDVTK 295
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 225
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 226 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 282
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 283 ALAHPFFQDVTK 294
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 224
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 225 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 282 ALAHPFFQDVTK 293
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 4 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 63
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 64 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 118
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 119 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 175
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 176 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 227
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 228 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 284
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 285 ALAHPFFQDVTK 296
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 176
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 177 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 225
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 286 FFQDVTK 292
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 226
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 227 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 284 ALAHPFFQDVTK 295
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 225
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 226 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 282
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 283 ALAHPFFQDVTK 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 176
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 177 GXKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 225
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 286 FFQDVTK 292
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 1 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 224
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 225 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 282 ALAHPFFQDVTK 293
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 176
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 177 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 225
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 286 FFQDVTK 292
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 175
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 176 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 224
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 285 FFQDVTK 291
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 175
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 176 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 224
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 285 FFQDVTK 291
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 176
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 177 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 225
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 286 FFQDVTK 292
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 170/303 (56%), Gaps = 29/303 (9%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y+ LE IG+G+YG V A + T E VA+K++ + LRE+ LL+ L+H +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYM 142
IV + ++ K + +VFE + DL + + N DL E + FL+Q+L+ L +
Sbjct: 63 IVRLHDVL-----HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+ NV HRDLKP+N+L N N +LK+ +FGLAR AF P+ + + V T WYR P++
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLAR-AFG-IPVRCYSAE-VVTLWYRPPDVL- 173
Query: 203 SFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
F +K Y+ +ID+WS GCIFAE+ G+PLFPG V QL I LLGTP+
Sbjct: 174 -FGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT--------- 223
Query: 261 EKARKYLTEMRKKPPVPLF-------QKFPNVDPLALRLLQRLIAFDPKDRPTAEEALAD 313
E+ +T++ P P++ P ++ LLQ L+ +P R +AEEAL
Sbjct: 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283
Query: 314 PYF 316
PYF
Sbjct: 284 PYF 286
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 1 GHMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 60
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 61 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQ 115
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 116 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 172
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 173 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 224
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 225 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 281
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 282 ALAHPFFQDVTK 293
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 72 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 183
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 184 GXKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 232
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 233 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 292
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 293 FFQDVTK 299
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 71
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 72 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 183
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 184 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 232
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 233 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 292
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 293 FFQDVTK 299
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 174/312 (55%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 2 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 61
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + A+ + + +L+Q+L+
Sbjct: 62 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ 116
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 117 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 173
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 174 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 225
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 226 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 282
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 283 ALAHPFFQDVTK 294
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 175/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 226
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 227 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 284 ALAHPFFQDVTK 295
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 174/312 (55%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + A+ + + +L+Q+L+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 226
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 227 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 284 ALAHPFFQDVTK 295
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 174/312 (55%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE + DL + A+ + + +L+Q+L+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 226
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 227 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 284 ALAHPFFQDVTK 295
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 116/312 (37%), Positives = 176/312 (56%), Gaps = 29/312 (9%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
G ++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L
Sbjct: 3 GSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 62
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLR 137
HP+IV++ ++ +K +Y+VFE ++ DL + + A+ + + +L+Q+L+
Sbjct: 63 NHPNIVKLLDVIHTENK-----LYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQ 117
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L + H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRA
Sbjct: 118 GLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRA 174
Query: 198 PE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
PE L G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP
Sbjct: 175 PEILLGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP------ 226
Query: 257 VVRNEKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+E +T M KP P + + P +D LL +++ +DP R +A+
Sbjct: 227 ---DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 283
Query: 310 ALADPYFKGLAK 321
ALA P+F+ + K
Sbjct: 284 ALAHPFFQDVTK 295
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 115/303 (37%), Positives = 169/303 (55%), Gaps = 29/303 (9%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y+ LE IG+G+YG V A + T E VA+K++ + LRE+ LL+ L+H +
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYM 142
IV + ++ K + +VFE + DL + + N DL E + FL+Q+L+ L +
Sbjct: 63 IVRLHDVL-----HSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+ NV HRDLKP+N+L N N +LK+ DFGLAR AF P+ + + V T WYR P++
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLAR-AFG-IPVRCYSAE-VVTLWYRPPDVL- 173
Query: 203 SFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
F +K Y+ +ID+WS GCIFAE+ +PLFPG V QL I LLGTP+
Sbjct: 174 -FGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPT--------- 223
Query: 261 EKARKYLTEMRKKPPVPLF-------QKFPNVDPLALRLLQRLIAFDPKDRPTAEEALAD 313
E+ +T++ P P++ P ++ LLQ L+ +P R +AEEAL
Sbjct: 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283
Query: 314 PYF 316
PYF
Sbjct: 284 PYF 286
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 112/309 (36%), Positives = 176/309 (56%), Gaps = 27/309 (8%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
++++K LE +G G+Y V ++ TG VA+K++ E + + I RE+ L++ L+
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI-REISLMKELK 61
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAND------DLTREHHQFFLYQ 134
H +IV + ++ +K + +VFE M++DL + + + L ++F +Q
Sbjct: 62 HENIVRLYDVIHTENK-----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQ 116
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+L+ L + H + HRDLKP+N+L N +LK+ DFGLAR AF P+ F ++ V T W
Sbjct: 117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLAR-AFG-IPVNTFSSE-VVTLW 173
Query: 195 YRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPE 253
YRAP+ L GS Y+ +IDIWS GCI AE++TGKPLFPG + QL LI D++GTP+
Sbjct: 174 YRAPDVLMGS--RTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNES 231
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQ------KFPNVDPLALRLLQRLIAFDPKDRPTA 307
V K KY ++++PP L Q K P +D + L L+ +P R +A
Sbjct: 232 LWPSV--TKLPKYNPNIQQRPPRDLRQVLQPHTKEP-LDGNLMDFLHGLLQLNPDMRLSA 288
Query: 308 EEALADPYF 316
++AL P+F
Sbjct: 289 KQALHHPWF 297
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRAPE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILL 176
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 177 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 225
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 286 FFQDVTK 292
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRAPE L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILL 175
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 176 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 224
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 285 FFQDVTK 291
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 174/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRAPE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILL 176
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 177 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 225
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 286 FFQDVTK 292
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 174/308 (56%), Gaps = 29/308 (9%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKY 141
IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 63 IVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-L 200
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRAPE L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEIL 174
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +
Sbjct: 175 LGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------D 223
Query: 261 EKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALAD 313
E +T M KP P + + P +D LL +++ +DP R +A+ ALA
Sbjct: 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
Query: 314 PYFKGLAK 321
P+F+ + K
Sbjct: 284 PFFQDVTK 291
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 174/308 (56%), Gaps = 29/308 (9%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKY 141
IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 64 IVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-L 200
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRAPE L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEIL 175
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +
Sbjct: 176 LGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------D 224
Query: 261 EKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALAD 313
E +T M KP P + + P +D LL +++ +DP R +A+ ALA
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 314 PYFKGLAK 321
P+F+ + K
Sbjct: 285 PFFQDVTK 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 173/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+ KI E +RE+ LL+ L HP+I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 176
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 177 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 225
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 286 FFQDVTK 292
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 173/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+ KI E +RE+ LL+ L HP+I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 175
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 176 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 224
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 285 FFQDVTK 291
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/307 (37%), Positives = 173/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + A+ + + +L+Q+L+ L +
Sbjct: 64 VKLLDVIHTENK-----LYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + T V T WYRAPE L
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTY-THEVVTLWYRAPEILL 175
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 176 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 224
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 225 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 284
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 285 FFQDVTK 291
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 115/307 (37%), Positives = 173/307 (56%), Gaps = 29/307 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+I
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKYM 142
V++ ++ +K +Y+VFE + DL + A+ + + +L+Q+L+ L +
Sbjct: 65 VKLLDVIHTENK-----LYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRAPE L
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEILL 176
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +E
Sbjct: 177 GCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------DE 225
Query: 262 KARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+T M KP P + + P +D LL +++ +DP R +A+ ALA P
Sbjct: 226 VVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHP 285
Query: 315 YFKGLAK 321
+F+ + K
Sbjct: 286 FFQDVTK 292
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/304 (37%), Positives = 172/304 (56%), Gaps = 29/304 (9%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
++ +E IG+G+YGVV A + TGE VA+KKI E +RE+ LL+ L HP+
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAN--DDLTREHHQFFLYQMLRALKY 141
IV++ ++ +K +Y+VFE + DL + + A+ + + +L+Q+L+ L +
Sbjct: 64 IVKLLDVIHTENK-----LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-L 200
H+ V HRDLKP+N+L N +K+ DFGLAR AF P+ + + V T WYRAPE L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR-AFG-VPVRTYXHE-VVTLWYRAPEIL 175
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
G + Y+ A+DIWS+GCIFAE++T + LFPG S + QL I LGTP +
Sbjct: 176 LGCKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP---------D 224
Query: 261 EKARKYLTEMRK-KPPVPLFQK------FPNVDPLALRLLQRLIAFDPKDRPTAEEALAD 313
E +T M KP P + + P +D LL +++ +DP R +A+ ALA
Sbjct: 225 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 284
Query: 314 PYFK 317
P+F+
Sbjct: 285 PFFQ 288
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/315 (37%), Positives = 167/315 (53%), Gaps = 24/315 (7%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAI-----RILREVKLL 76
A RY+ L+ +G+G + V A D +T + VAIKKI H S+A LRE+KLL
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIK--LGHRSEAKDGINRTALREIKLL 66
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAND-DLTREHHQFFLYQM 135
+ L HP+I+ + S +I +VF+ ME+DL +IK N LT H + ++
Sbjct: 67 QELSHPNIIGLLDAFGHKS-----NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMT 121
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
L+ L+Y+H + HRDLKP N+L + N LK+ DFGLA+ S + V TRWY
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRA---YXHQVVTRWY 178
Query: 196 RAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
RAPEL F ++ Y +D+W++GCI AE+L P PG S + QL I + LGTP+ E
Sbjct: 179 RAPELL--FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQ 236
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+ + Y+T + P +PL F L L+Q L F+P R TA +AL
Sbjct: 237 WPDMCS--LPDYVT-FKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMK 293
Query: 315 YFKGLAKIEREPSCQ 329
YF + P CQ
Sbjct: 294 YFSN--RPGPTPGCQ 306
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 182/338 (53%), Gaps = 26/338 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A + E VAIKK+ + D RE++++R+++HP++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKV------LQDKRFKNRELQIMRIVKHPNV 94
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIKANDDLTREHH----QFFLYQMLR 137
V++K S + KD + +V E + +++ + L + + ++YQ+LR
Sbjct: 95 VDLKAFFY--SNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLR 152
Query: 138 ALKYMHTANVYHRDLKPKNILANA-NCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+ DFG A++ + P + +R+YR
Sbjct: 153 SLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNV----SXICSRYYR 208
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT IDIWS GC+ AE++ G+PLFPG+S + QL I +LGTPS E I
Sbjct: 209 APELIFGA-TNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIK 267
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ ++R P +F+ P P A+ L+ RL+ + P R TA EAL P+F
Sbjct: 268 TMNPNYMEHKFPQIRPHPFSKVFR--PRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
Query: 317 KGLAKIE-REPSCQPISKL-EFEFERRRVTKDDIRELI 352
L E R P+ + + L + E V D I L+
Sbjct: 326 DELRTGEARMPNGRELPPLFNWTKEELSVRPDLISRLV 363
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 168/305 (55%), Gaps = 16/305 (5%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y+ L ++G+GSYG+V + TG VAIKK + + +RE+KLL+ LRH +
Sbjct: 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYM 142
+V + + ++ K Y+VFE ++ + ++ + L + Q +L+Q++ + +
Sbjct: 86 LVNLLEVC-----KKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LC 201
H+ N+ HRD+KP+NIL + + +K+CDFG AR + P V+ D VATRWYRAPE L
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA--PGEVY-DDEVATRWYRAPELLV 197
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
G KY A+D+W+IGC+ E+ G+PLFPG S + QL I LG P +
Sbjct: 198 GDV--KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKN 255
Query: 262 K--ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
A L E++++ PL +++P + + + L ++ + DP RP E L +F+
Sbjct: 256 PVFAGVRLPEIKERE--PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD 313
Query: 320 AKIER 324
ER
Sbjct: 314 GFAER 318
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 163/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 76 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 249 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 317 KGL 319
L
Sbjct: 307 DEL 309
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 158 bits (400), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 163/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 88
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 89 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YR
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 202
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 203 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 261
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 262 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 319
Query: 317 KGL 319
L
Sbjct: 320 DEL 322
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 25/304 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 103
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 104 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YR
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 217
Query: 197 APELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
APEL G+ + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 218 APELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 275
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ +++ P +F+ P P A+ L RL+ + P R T EA A +
Sbjct: 276 REMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 333
Query: 316 FKGL 319
F L
Sbjct: 334 FDEL 337
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 170/328 (51%), Gaps = 31/328 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEK-VAIKKIHDVFEHISDAIRILREVKLLRLLR- 80
+Y+ + IG+G+YG V A D G + VA+K++ + +REV +LR L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 81 --HPDIVEIKRI-MLPPSKREFKDIYVVFELMESDLHQVIKA--NDDLTREHHQFFLYQM 135
HP++V + + + + RE K + +VFE ++ DL + + E + ++Q+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
LR L ++H+ V HRDLKP+NIL ++ ++K+ DFGLAR+ + T V T WY
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY----SFQMALTSVVVTLWY 185
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS---- 251
RAPE+ S Y +D+WS+GCIFAE+ KPLF G S V QL I D++G P
Sbjct: 186 RAPEVL--LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
P +A+ R K P+ + ++D L LL + + F+P R +A AL
Sbjct: 244 PRDVALPRQ--------AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 312 ADPYFKGLAKIERE-----PSCQPISKL 334
+ PYF+ L + + P Q S+L
Sbjct: 296 SHPYFQDLERCKENLDSHLPPSQNTSEL 323
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 25/304 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 109
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 110 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YR
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 223
Query: 197 APELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
APEL G+ + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 224 APELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ +++ P +F+ P P A+ L RL+ + P R T EA A +
Sbjct: 282 REMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 316 FKGL 319
F L
Sbjct: 340 FDEL 343
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 163/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 80
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 81 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YR
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 194
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 195 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 253
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 254 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311
Query: 317 KGL 319
L
Sbjct: 312 DEL 314
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 25/304 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 154
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 155 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YR
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 268
Query: 197 APELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
APEL G+ + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 269 APELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 326
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ +++ P +F+ P P A+ L RL+ + P R T EA A +
Sbjct: 327 REMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 384
Query: 316 FKGL 319
F L
Sbjct: 385 FDEL 388
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 25/304 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 111
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 112 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YR
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 225
Query: 197 APELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
APEL G+ + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 226 APELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 283
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ +++ P +F+ P P A+ L RL+ + P R T EA A +
Sbjct: 284 REMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 341
Query: 316 FKGL 319
F L
Sbjct: 342 FDEL 345
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 158 bits (399), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 164/310 (52%), Gaps = 26/310 (8%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEK-VAIKKIHDVFEHISDAIRILREVKLLRLLR- 80
+Y+ + IG+G+YG V A D G + VA+K++ + +REV +LR L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 81 --HPDIVEIKRI-MLPPSKREFKDIYVVFELMESDLHQVIKA--NDDLTREHHQFFLYQM 135
HP++V + + + + RE K + +VFE ++ DL + + E + ++Q+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
LR L ++H+ V HRDLKP+NIL ++ ++K+ DFGLAR+ + T V T WY
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI----YSFQMALTSVVVTLWY 185
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS---- 251
RAPE+ S Y +D+WS+GCIFAE+ KPLF G S V QL I D++G P
Sbjct: 186 RAPEVL--LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
P +A+ R K P+ + ++D L LL + + F+P R +A AL
Sbjct: 244 PRDVALPRQ--------AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 312 ADPYFKGLAK 321
+ PYF+ L +
Sbjct: 296 SHPYFQDLER 305
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 165/304 (54%), Gaps = 25/304 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 113
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 114 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+YR
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRYYR 227
Query: 197 APELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
APEL G+ + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 228 APELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 285
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ +++ P +F+ P P A+ L RL+ + P R T EA A +
Sbjct: 286 REMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 343
Query: 316 FKGL 319
F L
Sbjct: 344 FDEL 347
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 164/305 (53%), Gaps = 27/305 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI--HDVFEHISDAIRILREVKLLRLLRHP 82
Y +VIG GS+GVV A +GE VAIKK+ F++ RE++++R L H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHC 73
Query: 83 DIVEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQM 135
+IV ++ S E KD + +V + + +++V + A L + + ++YQ+
Sbjct: 74 NIVRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
R+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRY 187
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
YRAPEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E
Sbjct: 188 YRAPELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
I + +++ P +F+ P P A+ L RL+ + P R T EA A
Sbjct: 247 IREMNPNYTEFAFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 315 YFKGL 319
+F L
Sbjct: 305 FFDEL 309
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 164/305 (53%), Gaps = 27/305 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI--HDVFEHISDAIRILREVKLLRLLRHP 82
Y +VIG GS+GVV A +GE VAIKK+ F++ RE++++R L H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHC 73
Query: 83 DIVEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQM 135
+IV ++ S E KD + +V + + +++V + A L + + ++YQ+
Sbjct: 74 NIVRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
R+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P Y+ +R+
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SYICSRY 187
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
YRAPEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E
Sbjct: 188 YRAPELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
I + +++ P +F+ P P A+ L RL+ + P R T EA A
Sbjct: 247 IREMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 315 YFKGL 319
+F L
Sbjct: 305 FFDEL 309
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/316 (35%), Positives = 164/316 (51%), Gaps = 47/316 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAI--RILREVKLLRLLR 80
+RY+ + +G+G+YG V AIDT T E VAIK+I EH + + +REV LL+ L+
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIR--LEHEEEGVPGTAIREVSLLKELQ 91
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALK 140
H +I+E+K ++ ++++FE E+DL + + N D++ + FLYQ++ +
Sbjct: 92 HRNIIELKSVI-----HHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVN 146
Query: 141 YMHTANVYHRDLKPKNIL-----ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
+ H+ HRDLKP+N+L A+ LK+ DFGLAR AF P+ F T + T WY
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-AFG-IPIRQF-THEIITLWY 203
Query: 196 RAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
R PE L GS Y+ ++DIWSI CI+AE+L PLFPG S + QL I ++LG P T
Sbjct: 204 RPPEILLGS--RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTT 261
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLL-------------QRLIAFDP 301
V K Q FP L+ + ++ DP
Sbjct: 262 WPGVTALPDWK--------------QSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDP 307
Query: 302 KDRPTAEEALADPYFK 317
R +A+ AL PYF
Sbjct: 308 VKRISAKNALEHPYFS 323
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 162/306 (52%), Gaps = 26/306 (8%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEK-VAIKKIHDVFEHISDAIRILREVKLLRLLR- 80
+Y+ + IG+G+YG V A D G + VA+K++ + +REV +LR L
Sbjct: 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 70
Query: 81 --HPDIVEIKRI-MLPPSKREFKDIYVVFELMESDLHQVIKA--NDDLTREHHQFFLYQM 135
HP++V + + + + RE K + +VFE ++ DL + + E + ++Q+
Sbjct: 71 FEHPNVVRLFDVCTVSRTDRETK-LTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
LR L ++H+ V HRDLKP+NIL ++ ++K+ DFGLAR+ + T V T WY
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI----YSFQMALTSVVVTLWY 185
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS---- 251
RAPE+ S Y +D+WS+GCIFAE+ KPLF G S V QL I D++G P
Sbjct: 186 RAPEVL--LQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
P +A+ R K P+ + ++D L LL + + F+P R +A AL
Sbjct: 244 PRDVALPRQ--------AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 312 ADPYFK 317
+ PYF+
Sbjct: 296 SHPYFQ 301
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 99/347 (28%), Positives = 180/347 (51%), Gaps = 71/347 (20%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
+ +Y + + +G GS+G+VC D +G++ A+KK+ + D RE+ ++++L
Sbjct: 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV------LQDPRYKNRELDIMKVLD 58
Query: 81 HPDIVEI-----------------------------------KRIMLPPSKREFKDIYVV 105
H +I+++ K +++ PS+ ++ + V+
Sbjct: 59 HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKY--LNVI 116
Query: 106 FELMESDLHQV----IKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANA 161
E + LH+V I++ + ++YQ+ RA+ ++H+ + HRD+KP+N+L N+
Sbjct: 117 MEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS 176
Query: 162 -NCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGC 219
+ LK+CDFG A+ P + +R+YRAPEL G+ ++YTP+ID+WSIGC
Sbjct: 177 KDNTLKLCDFGSAKKLIPSEPSVA----XICSRFYRAPELMLGA--TEYTPSIDLWSIGC 230
Query: 220 IFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLF 279
+F E++ GKPLF G++ + QL I ++GTP+ E + + + TE+R P
Sbjct: 231 VFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMI-----RMNPHYTEVR----FPTL 281
Query: 280 QK------FPNVDP-LALRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
+ P P LA+ LL++++ ++P R EA+A P+F L
Sbjct: 282 KAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL 328
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 157/302 (51%), Gaps = 7/302 (2%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
+ ++Y+ L IG+G++G V A TG+KVA+KK+ E I LRE+K+L+LL+
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 81 HPDIV---EIKRIMLPPSKREFKDIYVVFELMESDLHQVI-KANDDLTREHHQFFLYQML 136
H ++V EI R P R IY+VF+ E DL ++ T + + +L
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV-AFSDTPMTVFWTDYVATRWY 195
L Y+H + HRD+K N+L + LK+ DFGLAR + + + + V T WY
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
R PEL Y P ID+W GCI AE+ T P+ G + HQL LI+ L G+ +PE
Sbjct: 196 RPPELLLG-ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 256 AVVRNEKARKYLTEMR-KKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
V N + + L ++ +K V K DP AL L+ +L+ DP R +++AL
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 315 YF 316
+F
Sbjct: 315 FF 316
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKRIMLPPSKREFKDIY---VVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD+ +V + + +++V + A L + + ++YQ+ R
Sbjct: 76 VRLRYFFY--SSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 249 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 317 KGL 319
L
Sbjct: 307 DEL 309
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 157/302 (51%), Gaps = 7/302 (2%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
+ ++Y+ L IG+G++G V A TG+KVA+KK+ E I LRE+K+L+LL+
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 81 HPDIV---EIKRIMLPPSKREFKDIYVVFELMESDLHQVI-KANDDLTREHHQFFLYQML 136
H ++V EI R P R IY+VF+ E DL ++ T + + +L
Sbjct: 76 HENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV-AFSDTPMTVFWTDYVATRWY 195
L Y+H + HRD+K N+L + LK+ DFGLAR + + + + V T WY
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
R PEL Y P ID+W GCI AE+ T P+ G + HQL LI+ L G+ +PE
Sbjct: 196 RPPELLLG-ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 256 AVVRNEKARKYLTEMR-KKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
V N + + L ++ +K V K DP AL L+ +L+ DP R +++AL
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 315 YF 316
+F
Sbjct: 315 FF 316
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 157/302 (51%), Gaps = 7/302 (2%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
+ ++Y+ L IG+G++G V A TG+KVA+KK+ E I LRE+K+L+LL+
Sbjct: 16 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 75
Query: 81 HPDIV---EIKRIMLPPSKREFKDIYVVFELMESDLHQVI-KANDDLTREHHQFFLYQML 136
H ++V EI R P R IY+VF+ E DL ++ T + + +L
Sbjct: 76 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 135
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV-AFSDTPMTVFWTDYVATRWY 195
L Y+H + HRD+K N+L + LK+ DFGLAR + + + + V T WY
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
R PEL Y P ID+W GCI AE+ T P+ G + HQL LI+ L G+ +PE
Sbjct: 196 RPPELLLG-ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 254
Query: 256 AVVRNEKARKYLTEMR-KKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
V N + + L ++ +K V K DP AL L+ +L+ DP R +++AL
Sbjct: 255 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 314
Query: 315 YF 316
+F
Sbjct: 315 FF 316
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/302 (34%), Positives = 157/302 (51%), Gaps = 7/302 (2%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
+ ++Y+ L IG+G++G V A TG+KVA+KK+ E I LRE+K+L+LL+
Sbjct: 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK 74
Query: 81 HPDIV---EIKRIMLPPSKREFKDIYVVFELMESDLHQVI-KANDDLTREHHQFFLYQML 136
H ++V EI R P R IY+VF+ E DL ++ T + + +L
Sbjct: 75 HENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLL 134
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV-AFSDTPMTVFWTDYVATRWY 195
L Y+H + HRD+K N+L + LK+ DFGLAR + + + + V T WY
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
R PEL Y P ID+W GCI AE+ T P+ G + HQL LI+ L G+ +PE
Sbjct: 195 RPPELLLG-ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW 253
Query: 256 AVVRNEKARKYLTEMR-KKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
V N + + L ++ +K V K DP AL L+ +L+ DP R +++AL
Sbjct: 254 PNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD 313
Query: 315 YF 316
+F
Sbjct: 314 FF 315
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/305 (34%), Positives = 164/305 (53%), Gaps = 27/305 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI--HDVFEHISDAIRILREVKLLRLLRHP 82
Y +VIG GS+GVV A +GE VAIKK+ F++ RE++++R L H
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN--------RELQIMRKLDHC 73
Query: 83 DIVEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQM 135
+IV ++ S E KD + +V + + + +++V + A L + + ++YQ+
Sbjct: 74 NIVRLRYFFY--SSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
R+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+
Sbjct: 132 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRY 187
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
YRAPEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E
Sbjct: 188 YRAPELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQ 246
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
I + +++ P +F+ P P A+ L RL+ + P R T EA A
Sbjct: 247 IREMNPNYTEFAFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 315 YFKGL 319
+F L
Sbjct: 305 FFDEL 309
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 76
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 77 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YR
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 191 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 249
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 250 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 307
Query: 317 KGL 319
L
Sbjct: 308 DEL 310
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 76 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 249 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 317 KGL 319
L
Sbjct: 307 DEL 309
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 75
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 76 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YR
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 190 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 248
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 249 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
Query: 317 KGL 319
L
Sbjct: 307 DEL 309
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 79
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 80 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YR
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 193
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 194 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 252
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 253 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310
Query: 317 KGL 319
L
Sbjct: 311 DEL 313
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 87
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 88 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YR
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 201
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 202 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 260
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 261 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
Query: 317 KGL 319
L
Sbjct: 319 DEL 321
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 155 bits (392), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 94
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 95 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YR
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 208
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 209 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 267
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 268 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325
Query: 317 KGL 319
L
Sbjct: 326 DEL 328
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 83
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 84 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YR
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 197
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 198 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 256
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 257 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314
Query: 317 KGL 319
L
Sbjct: 315 DEL 317
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 164/304 (53%), Gaps = 25/304 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 109
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 110 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YR
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 223
Query: 197 APELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
APEL G+ + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 224 APELIFGA--TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 281
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ +++ P +F+ P P A+ L RL+ + P R T EA A +
Sbjct: 282 REMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSF 339
Query: 316 FKGL 319
F L
Sbjct: 340 FDEL 343
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 23/303 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y +VIG GS+GVV A +GE VAIKK+ + D RE++++R L H +I
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV------LQDKRFKNRELQIMRKLDHCNI 87
Query: 85 VEIKRIMLPPSKREFKD---IYVVFELMESDLHQVIK----ANDDLTREHHQFFLYQMLR 137
V ++ S E KD + +V + + +++V + A L + + ++YQ+ R
Sbjct: 88 VRLRYFFY--SSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+L Y+H+ + HRD+KP+N+L + + LK+CDFG A+ P + +R+YR
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNV----SXICSRYYR 201
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIA 256
APEL + YT +ID+WS GC+ AE+L G+P+FPG S V QL I +LGTP+ E I
Sbjct: 202 APELIFGA-TDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 260
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ +++ P +F+ P P A+ L RL+ + P R T EA A +F
Sbjct: 261 EMNPNYTEFKFPQIKAHPWTKVFR--PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
Query: 317 KGL 319
L
Sbjct: 319 DEL 321
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 167/316 (52%), Gaps = 32/316 (10%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLR--- 77
+ +R+++ + G+G++G V + TG VAIKK+ I D RE+++++
Sbjct: 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV------IQDPRFRNRELQIMQDLA 74
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIY--VVFELMESDLHQVIKANDDLTREHH------- 128
+L HP+IV+++ +R+ +DIY VV E + LH+ + + R
Sbjct: 75 VLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCR---NYYRRQVAPPPILI 131
Query: 129 QFFLYQMLRALKYMH--TANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVF 185
+ FL+Q++R++ +H + NV HRD+KP N+L N A+ LK+CDFG A+ P
Sbjct: 132 KVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVA- 190
Query: 186 WTDYVATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLIT 244
Y+ +R+YRAPEL G+ YT A+DIWS+GCIFAE++ G+P+F G + QL I
Sbjct: 191 ---YICSRYYRAPELIFGN--QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIV 245
Query: 245 DLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPL-ALRLLQRLIAFDPKD 303
+LG PS E + + L + P +F D A LL L+ + P++
Sbjct: 246 RVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEE 305
Query: 304 RPTAEEALADPYFKGL 319
R EAL PYF L
Sbjct: 306 RMKPYEALCHPYFDEL 321
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/304 (34%), Positives = 152/304 (50%), Gaps = 25/304 (8%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR-- 80
+RY+ + IG G+YG V A D H+G VA+K + I +REV LLR L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 81 -HPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVI--KANDDLTREHHQFFLYQML 136
HP++V + + + RE K + +VFE ++ DL + L E + + Q L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
R L ++H + HRDLKP+NIL + +K+ DFGLAR+ M +F V T WYR
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI--YSYQMALF--PVVVTLWYR 178
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS----P 252
APE+ S Y +D+WS+GCIFAE+ KPLF G S QL I DL+G P P
Sbjct: 179 APEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALA 312
+++ R + P P+ P ++ +LL ++ F+P R +A AL
Sbjct: 237 RDVSLPRG--------AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 288
Query: 313 DPYF 316
Y
Sbjct: 289 HSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 150/304 (49%), Gaps = 25/304 (8%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR-- 80
+RY+ + IG G+YG V A D H+G VA+K + I +REV LLR L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 81 -HPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVI--KANDDLTREHHQFFLYQML 136
HP++V + + + RE K + +VFE ++ DL + L E + + Q L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
R L ++H + HRDLKP+NIL + +K+ DFGLAR+ + V T WYR
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALA----PVVVTLWYR 178
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS----P 252
APE+ S Y +D+WS+GCIFAE+ KPLF G S QL I DL+G P P
Sbjct: 179 APEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALA 312
+++ R + P P+ P ++ +LL ++ F+P R +A AL
Sbjct: 237 RDVSLPRG--------AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 288
Query: 313 DPYF 316
Y
Sbjct: 289 HSYL 292
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 148 bits (373), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 150/304 (49%), Gaps = 25/304 (8%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR-- 80
+RY+ + IG G+YG V A D H+G VA+K + I +REV LLR L
Sbjct: 4 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF 63
Query: 81 -HPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVI--KANDDLTREHHQFFLYQML 136
HP++V + + + RE K + +VFE ++ DL + L E + + Q L
Sbjct: 64 EHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 122
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
R L ++H + HRDLKP+NIL + +K+ DFGLAR+ + V T WYR
Sbjct: 123 RGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD----PVVVTLWYR 178
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS----P 252
APE+ S Y +D+WS+GCIFAE+ KPLF G S QL I DL+G P P
Sbjct: 179 APEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALA 312
+++ R + P P+ P ++ +LL ++ F+P R +A AL
Sbjct: 237 RDVSLPRG--------AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 288
Query: 313 DPYF 316
Y
Sbjct: 289 HSYL 292
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 147 bits (371), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 152/307 (49%), Gaps = 28/307 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI---HDVFEHISDAIRILREVKLLRLL 79
+RY+ + IG G+YG V A D H+G VA+K + + I +REV LLR L
Sbjct: 9 SRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRL 68
Query: 80 R---HPDIVEIKRIMLPP-SKREFKDIYVVFELMESDLHQVI--KANDDLTREHHQFFLY 133
HP++V + + + RE K + +VFE ++ DL + L E + +
Sbjct: 69 EAFEHPNVVRLMDVCATSRTDREIK-VTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 127
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q LR L ++H + HRDLKP+NIL + +K+ DFGLAR+ +T V T
Sbjct: 128 QFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALT----PVVVTL 183
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS-- 251
WYRAPE+ S Y +D+WS+GCIFAE+ KPLF G S QL I DL+G P
Sbjct: 184 WYRAPEVL--LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPED 241
Query: 252 --PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
P +++ R + P P+ P ++ +LL ++ F+P R +A
Sbjct: 242 DWPRDVSLPRG--------AFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFR 293
Query: 310 ALADPYF 316
AL Y
Sbjct: 294 ALQHSYL 300
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/329 (33%), Positives = 165/329 (50%), Gaps = 63/329 (19%)
Query: 31 IGKGSYGVV--CAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIK 88
+G+G+YG V D + A+K+I E ++ RE+ LLR L+HP+++ ++
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQI----EGTGISMSACREIALLRELKHPNVISLQ 84
Query: 89 RIMLPPSKREFKDIYVVFELMESDL------HQVIKAND---DLTREHHQFFLYQMLRAL 139
++ L + R+ ++++F+ E DL H+ KAN L R + LYQ+L +
Sbjct: 85 KVFLSHADRK---VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGI 141
Query: 140 KYMHTANVYHRDLKPKNILANANC----KLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
Y+H V HRDLKP NIL ++K+ D G AR+ S V T WY
Sbjct: 142 HYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWY 201
Query: 196 RAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK-------SVVH--QLDLITD 245
RAPEL G+ YT AIDIW+IGCIFAE+LT +P+F + + H QLD I +
Sbjct: 202 RAPELLLGA--RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFN 259
Query: 246 LLGTPS----------PETIAVVR--------NEKARKYLTEMRKKPPVPLFQKFPNVDP 287
++G P+ PE +++ N KY+ + + KP D
Sbjct: 260 VMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKP-----------DS 308
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYF 316
A LLQ+L+ DP R T+E+A+ DPYF
Sbjct: 309 KAFHLLQKLLTMDPIKRITSEQAMQDPYF 337
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 162/315 (51%), Gaps = 26/315 (8%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + V ++ +I RE+K+L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKN-----KIKREIKIL 85
Query: 77 RLLRH-PDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQ 134
LR P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y+
Sbjct: 86 ENLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYE 139
Query: 135 MLRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R
Sbjct: 140 ILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASR 195
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSP 252
+++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 196 YFKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDL 254
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPT 306
N + ++ + +++F + V P AL L +L+ +D + R T
Sbjct: 255 YDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT 314
Query: 307 AEEALADPYFKGLAK 321
A EA+ PYF + K
Sbjct: 315 AREAMEHPYFYTVVK 329
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 155/336 (46%), Gaps = 58/336 (17%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
A RY++L+VIGKGS+G V A D + VA+K + + A E+++L LR
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE---EIRILEHLRK 152
Query: 82 PDIVEIKRIMLPPSKREFKD-IYVVFELMESDLHQVIKAND------DLTREHHQFFLYQ 134
D ++ F++ I + FEL+ +L+++IK N L R+ F +
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK----FAHS 208
Query: 135 MLRALKYMHTANVYHRDLKPKNIL--ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+L+ L +H + H DLKP+NIL +KV DFG + + +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV------YTXIQS 262
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
R+YRAPE+ ++Y ID+WS+GCI AE+LTG PL PG+ QL + +LLG PS
Sbjct: 263 RFYRAPEVI--LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320
Query: 253 ETIAVVRNEK--------------------------ARKYLTEMRKKPPVPLFQKFPNV- 285
+ + + K R ++R P +++ N
Sbjct: 321 KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPES---REWGNAL 377
Query: 286 ----DPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
DPL L L++ + +DP R T +AL P+ +
Sbjct: 378 KGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 122 bits (305), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 155/336 (46%), Gaps = 58/336 (17%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
A RY++L+VIGKGS+G V A D + VA+K + + A E+++L LR
Sbjct: 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE---EIRILEHLRK 152
Query: 82 PDIVEIKRIMLPPSKREFKD-IYVVFELMESDLHQVIKAND------DLTREHHQFFLYQ 134
D ++ F++ I + FEL+ +L+++IK N L R+ F +
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK----FAHS 208
Query: 135 MLRALKYMHTANVYHRDLKPKNIL--ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+L+ L +H + H DLKP+NIL +KV DFG + + +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV------YTXIQS 262
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
R+YRAPE+ ++Y ID+WS+GCI AE+LTG PL PG+ QL + +LLG PS
Sbjct: 263 RFYRAPEVI--LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320
Query: 253 ETIAVVRNEK--------------------------ARKYLTEMRKKPPVPLFQKFPNV- 285
+ + + K R ++R P +++ N
Sbjct: 321 KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPES---REWGNAL 377
Query: 286 ----DPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
DPL L L++ + +DP R T +AL P+ +
Sbjct: 378 KGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 153/336 (45%), Gaps = 58/336 (17%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
A RY++L+VIGKG +G V A D + VA+K + + A E+++L LR
Sbjct: 96 AYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAE---EIRILEHLRK 152
Query: 82 PDIVEIKRIMLPPSKREFKD-IYVVFELMESDLHQVIKAND------DLTREHHQFFLYQ 134
D ++ F++ I + FEL+ +L+++IK N L R+ F +
Sbjct: 153 QDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRK----FAHS 208
Query: 135 MLRALKYMHTANVYHRDLKPKNIL--ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+L+ L +H + H DLKP+NIL +KV DFG + + +
Sbjct: 209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRV------YXXIQS 262
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
R+YRAPE+ ++Y ID+WS+GCI AE+LTG PL PG+ QL + +LLG P
Sbjct: 263 RFYRAPEVI--LGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ 320
Query: 253 ETIAVVRNEK--------------------------ARKYLTEMRKKPPVPLFQKFPNV- 285
+ + + K R ++R P +++ N
Sbjct: 321 KLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPES---REWGNAL 377
Query: 286 ----DPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
DPL L L++ + +DP R T +AL P+ +
Sbjct: 378 KGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 151/329 (45%), Gaps = 58/329 (17%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA------IRILREVKLL 76
+ Y + + +G G+ G V A + T +KVAIK I I A + + E+++L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
+ L HP I++IK + +D Y+V ELME +L + N L + + YQM
Sbjct: 70 KKLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 136 LRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
L A++Y+H + HRDLKP+N+L ++ +C +K+ DFG +++ + M T
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL----CGT 179
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPG-KSVVHQLDLITDLLGTP 250
Y APE+ S + Y A+D WS+G I L+G P F ++ V D IT
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
PE A V + AL L+++L+ DPK R T EEA
Sbjct: 240 IPEVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEA 272
Query: 311 LADPY---------FKGLAKIEREPSCQP 330
L P+ F+ L E E + +P
Sbjct: 273 LRHPWLQDEDMKRKFQDLLSEENESTAKP 301
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 144/307 (46%), Gaps = 49/307 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA------IRILREVKLL 76
+ Y + + +G G+ G V A + T +KVAIK I I A + + E+++L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
+ L HP I++IK + +D Y+V ELME +L + N L + + YQM
Sbjct: 70 KKLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 136 LRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
L A++Y+H + HRDLKP+N+L ++ +C +K+ DFG +++ + M T
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL----CGT 179
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPG-KSVVHQLDLITDLLGTP 250
Y APE+ S + Y A+D WS+G I L+G P F ++ V D IT
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
PE A V + AL L+++L+ DPK R T EEA
Sbjct: 240 IPEVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEA 272
Query: 311 LADPYFK 317
L P+ +
Sbjct: 273 LRHPWLQ 279
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 144/307 (46%), Gaps = 49/307 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA------IRILREVKLL 76
+ Y + + +G G+ G V A + T +KVAIK I I A + + E+++L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
+ L HP I++IK + +D Y+V ELME +L + N L + + YQM
Sbjct: 69 KKLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 136 LRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
L A++Y+H + HRDLKP+N+L ++ +C +K+ DFG +++ + M T
Sbjct: 123 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL----CGT 178
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPG-KSVVHQLDLITDLLGTP 250
Y APE+ S + Y A+D WS+G I L+G P F ++ V D IT
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 238
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
PE A V + AL L+++L+ DPK R T EEA
Sbjct: 239 IPEVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEA 271
Query: 311 LADPYFK 317
L P+ +
Sbjct: 272 LRHPWLQ 278
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 144/307 (46%), Gaps = 49/307 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA------IRILREVKLL 76
+ Y + + +G G+ G V A + T +KVAIK I I A + + E+++L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
+ L HP I++IK + +D Y+V ELME +L + N L + + YQM
Sbjct: 70 KKLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 136 LRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
L A++Y+H + HRDLKP+N+L ++ +C +K+ DFG +++ + M T
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL----CGT 179
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFP-GKSVVHQLDLITDLLGTP 250
Y APE+ S + Y A+D WS+G I L+G P F ++ V D IT
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
PE A V + AL L+++L+ DPK R T EEA
Sbjct: 240 IPEVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEA 272
Query: 311 LADPYFK 317
L P+ +
Sbjct: 273 LRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/307 (30%), Positives = 144/307 (46%), Gaps = 49/307 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA------IRILREVKLL 76
+ Y + + +G G+ G V A + T +KVAIK I I A + + E+++L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
+ L HP I++IK + +D Y+V ELME +L + N L + + YQM
Sbjct: 76 KKLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 136 LRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
L A++Y+H + HRDLKP+N+L ++ +C +K+ DFG +++ + M T
Sbjct: 130 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL----CGT 185
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFP-GKSVVHQLDLITDLLGTP 250
Y APE+ S + Y A+D WS+G I L+G P F ++ V D IT
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 245
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
PE A V + AL L+++L+ DPK R T EEA
Sbjct: 246 IPEVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEA 278
Query: 311 LADPYFK 317
L P+ +
Sbjct: 279 LRHPWLQ 285
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 111/218 (50%), Gaps = 16/218 (7%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
A RY I+ ++GKGS+G V D T ++ A+K I+ D ILREV+LL+ L H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFEL-MESDLHQVIKANDDLTREHHQFFLYQMLRALK 140
P+I+++ I+ S Y+V EL +L I + + Q+ +
Sbjct: 81 PNIMKLFEILEDSSS-----FYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 141 YMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
YMH N+ HRDLKP+NIL + +C +K+ DFGL+ +T M D + T +Y A
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM----KDRIGTAYYIA 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKS 235
PE+ Y D+WS G I +L+G P F GK+
Sbjct: 192 PEV---LRGTYDEKCDVWSAGVILYILLSGTPPFYGKN 226
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 144/307 (46%), Gaps = 49/307 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA------IRILREVKLL 76
+ Y + + +G G+ G V A + T +KVAI+ I I A + + E+++L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
+ L HP I++IK + +D Y+V ELME +L + N L + + YQM
Sbjct: 195 KKLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 136 LRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
L A++Y+H + HRDLKP+N+L ++ +C +K+ DFG +++ + M T
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL----CGT 304
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFP-GKSVVHQLDLITDLLGTP 250
Y APE+ S + Y A+D WS+G I L+G P F ++ V D IT
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 364
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
PE A V + AL L+++L+ DPK R T EEA
Sbjct: 365 IPEVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEA 397
Query: 311 LADPYFK 317
L P+ +
Sbjct: 398 LRHPWLQ 404
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/307 (29%), Positives = 144/307 (46%), Gaps = 49/307 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA------IRILREVKLL 76
+ Y + + +G G+ G V A + T +KVAI+ I I A + + E+++L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
+ L HP I++IK + +D Y+V ELME +L + N L + + YQM
Sbjct: 209 KKLNHPCIIKIKNFF------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 136 LRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
L A++Y+H + HRDLKP+N+L ++ +C +K+ DFG +++ + M T
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL----CGT 318
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFP-GKSVVHQLDLITDLLGTP 250
Y APE+ S + Y A+D WS+G I L+G P F ++ V D IT
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 378
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
PE A V + AL L+++L+ DPK R T EEA
Sbjct: 379 IPEVWAEVSEK---------------------------ALDLVKKLLVVDPKARFTTEEA 411
Query: 311 LADPYFK 317
L P+ +
Sbjct: 412 LRHPWLQ 418
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 43/300 (14%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
A RY I+ ++GKGS+G V D T ++ A+K I+ D ILREV+LL+ L H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFEL-MESDLHQVIKANDDLTREHHQFFLYQMLRALK 140
P+I+++ I+ S Y+V EL +L I + + Q+ +
Sbjct: 81 PNIMKLFEILEDSS-----SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 141 YMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
YMH N+ HRDLKP+NIL + +C +K+ DFGL+ +T M D + T +Y A
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM----KDRIGTAYYIA 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAV 257
PE+ Y D+WS G I +L+G P F GK+ +
Sbjct: 192 PEV---LRGTYDEKCDVWSAGVILYILLSGTPPFYGKN------------------EYDI 230
Query: 258 VRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
++ + KY ++ ++ + A L+++++ F P R TA + L P+ +
Sbjct: 231 LKRVETGKYAFDL---------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 115 bits (287), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 139/300 (46%), Gaps = 43/300 (14%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
A RY I+ ++GKGS+G V D T ++ A+K I+ D ILREV+LL+ L H
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDH 80
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFEL-MESDLHQVIKANDDLTREHHQFFLYQMLRALK 140
P+I+++ I+ S Y+V EL +L I + + Q+ +
Sbjct: 81 PNIMKLFEILEDSS-----SFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGIT 135
Query: 141 YMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
YMH N+ HRDLKP+NIL + +C +K+ DFGL+ +T M D + T +Y A
Sbjct: 136 YMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM----KDRIGTAYYIA 191
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAV 257
PE+ Y D+WS G I +L+G P F GK+ +
Sbjct: 192 PEV---LRGTYDEKCDVWSAGVILYILLSGTPPFYGKN------------------EYDI 230
Query: 258 VRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
++ + KY ++ ++ + A L+++++ F P R TA + L P+ +
Sbjct: 231 LKRVETGKYAFDL---------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 114 bits (286), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 154/314 (49%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKVA+K + + + L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVAVKIL----KPVKKKKIKREIKILE 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N+L + + KL++ D+GLA V VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 136/295 (46%), Gaps = 44/295 (14%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA-IRILREVKLLRLLRHPD 83
Y I E +G+GS+G V A T +KVA+K I SD +R+ RE+ L+LLRHP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
I+++ ++ P+ DI +V E +L I +T + + F Q++ A++Y H
Sbjct: 71 IIKLYDVITTPT-----DIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH 125
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC-G 202
+ HRDLKP+N+L + N +K+ DFGL+ + F + Y APE+ G
Sbjct: 126 RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVING 181
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
++ P +D+WS G + +L G+ F
Sbjct: 182 KLYA--GPEVDVWSCGIVLYVMLVGRLPFDD----------------------------- 210
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
+++ + KK ++ + P A L++R+I DP R T +E DP+F
Sbjct: 211 --EFIPNLFKKVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFN 263
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 147/310 (47%), Gaps = 44/310 (14%)
Query: 10 LKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA-IR 68
+ K + Y+I++ +G+GS+G V A T TG+KVA+K I+ SD R
Sbjct: 1 MNPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGR 60
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHH 128
I RE+ LRLLRHP I+++ ++ SK E I +V E ++L I D ++ +
Sbjct: 61 IEREISYLRLLRHPHIIKLYDVI--KSKDE---IIMVIEYAGNELFDYIVQRDKMSEQEA 115
Query: 129 QFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTD 188
+ F Q++ A++Y H + HRDLKP+N+L + + +K+ DFGL+ + F
Sbjct: 116 RRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKT 171
Query: 189 YVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLL 247
+ Y APE + G ++ P +D+WS G I +L + F
Sbjct: 172 SCGSPNYAAPEVISGKLYA--GPEVDVWSCGVILYVMLCRRLPF---------------- 213
Query: 248 GTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTA 307
E+I V+ + T +P F + P A L++R++ +P +R +
Sbjct: 214 ---DDESIPVLFKNISNGVYT-------LPKF-----LSPGAAGLIKRMLIVNPLNRISI 258
Query: 308 EEALADPYFK 317
E + D +FK
Sbjct: 259 HEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 146/307 (47%), Gaps = 44/307 (14%)
Query: 13 KDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA-IRILR 71
K + Y+I++ +G+GS+G V A T TG+KVA+K I+ SD RI R
Sbjct: 3 KSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIER 62
Query: 72 EVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF 131
E+ LRLLRHP I+++ ++ SK E I +V E ++L I D ++ + + F
Sbjct: 63 EISYLRLLRHPHIIKLYDVI--KSKDE---IIMVIEYAGNELFDYIVQRDKMSEQEARRF 117
Query: 132 LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVA 191
Q++ A++Y H + HRDLKP+N+L + + +K+ DFGL+ + F
Sbjct: 118 FQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCG 173
Query: 192 TRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTP 250
+ Y APE + G ++ P +D+WS G I +L + F
Sbjct: 174 SPNYAAPEVISGKLYA--GPEVDVWSCGVILYVMLCRRLPF------------------- 212
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
E+I V+ + T +P F + P A L++R++ +P +R + E
Sbjct: 213 DDESIPVLFKNISNGVYT-------LPKF-----LSPGAAGLIKRMLIVNPLNRISIHEI 260
Query: 311 LADPYFK 317
+ D +FK
Sbjct: 261 MQDDWFK 267
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 44/297 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA-IRILREVKLLRLLRH 81
Y+I++ +G+GS+G V A T TG+KVA+K I+ SD RI RE+ LRLLRH
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P I+++ ++ SK E I +V E ++L I D ++ + + F Q++ A++Y
Sbjct: 64 PHIIKLYDVI--KSKDE---IIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 118
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-L 200
H + HRDLKP+N+L + + +K+ DFGL+ + F + Y APE +
Sbjct: 119 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVI 174
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
G ++ P +D+WS G I +L + F E+I V+
Sbjct: 175 SGKLYA--GPEVDVWSCGVILYVMLCRRLPF-------------------DDESIPVLFK 213
Query: 261 EKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
+ T +P F + P A L++R++ +P +R + E + D +FK
Sbjct: 214 NISNGVYT-------LPKF-----LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 144/297 (48%), Gaps = 44/297 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA-IRILREVKLLRLLRH 81
Y+I++ +G+GS+G V A T TG+KVA+K I+ SD RI RE+ LRLLRH
Sbjct: 8 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 67
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P I+++ ++ SK E I +V E ++L I D ++ + + F Q++ A++Y
Sbjct: 68 PHIIKLYDVI--KSKDE---IIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY 122
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-L 200
H + HRDLKP+N+L + + +K+ DFGL+ + F + Y APE +
Sbjct: 123 CHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----FLKTSCGSPNYAAPEVI 178
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
G ++ P +D+WS G I +L + F E+I V+
Sbjct: 179 SGKLYA--GPEVDVWSCGVILYVMLCRRLPF-------------------DDESIPVLFK 217
Query: 261 EKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
+ T +P F + P A L++R++ +P +R + E + D +FK
Sbjct: 218 NISNGVYT-------LPKF-----LSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFK 262
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 156/321 (48%), Gaps = 24/321 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAKIEREPSC 328
EA+ PYF + K + +P
Sbjct: 316 REAMEHPYFYPVVKEQSQPCA 336
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 30 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 85
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 86 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 139
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 195
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 196 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 254
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 314
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 315 REAMEHPYFYTVVK 328
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 30 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 85
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 86 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 139
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 195
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 196 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 254
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 255 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 314
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 315 REAMEHPYFYTVVK 328
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 29 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 84
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 85 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 138
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 139 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 194
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 195 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 253
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 254 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 313
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 314 REAMEHPYFYTVVK 327
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 140
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 36 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 91
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 92 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLYQT---LTDYDIRFYMYEI 145
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 146 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 201
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 202 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 260
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 261 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 320
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 321 REAMEHPYFYTVVK 334
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 107 bits (268), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 153/314 (48%), Gaps = 24/314 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
E+G+ + Y+++ +G+G Y V AI+ EKV +K + + + L
Sbjct: 31 VEWGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKIL----KPVKKKKIKREIKILE 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQM 135
L P+I+ + I+ P R +VFE + +D Q+ + LT +F++Y++
Sbjct: 87 NLRGGPNIITLADIVKDPVSRTPA---LVFEHVNNTDFKQLRQT---LTDYDIRFYMYEI 140
Query: 136 LRALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
L+AL Y H+ + HRD+KP N++ + + KL++ D+GLA V VA+R+
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNV----RVASRY 196
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLLGTPSPE 253
++ PEL + Y ++D+WS+GC+ A ++ K P F G QL I +LGT
Sbjct: 197 FKGPELLVD-YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLY 255
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTA 307
N + ++ + +++F + V P AL L +L+ +D + R TA
Sbjct: 256 DYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTA 315
Query: 308 EEALADPYFKGLAK 321
EA+ PYF + K
Sbjct: 316 REAMEHPYFYTVVK 329
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 107 bits (268), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 163/332 (49%), Gaps = 37/332 (11%)
Query: 8 KELKDKDFFT-EYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA 66
KE D + T ++G+ + Y+++ +G+G Y V I+ + EK IK + + +
Sbjct: 15 KEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKK 70
Query: 67 IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRE 126
L L+ P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 71 KIKREIKILQNLMGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDY 125
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLARVAFSDTPMTVF 185
++++Y++L+AL Y H+ + HRD+KP N++ + KL++ D+GLA V
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV- 184
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLIT 244
VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G QL I
Sbjct: 185 ---RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 245 DLLGTPSPETIAVVRNE-------KARKYLTEMRKKPPVPLFQKFPNVD------PLALR 291
+LGT + + V N+ + + +KP + KF N D P A+
Sbjct: 241 KVLGT---DGLNVYLNKYRIELDPQLEALVGRHSRKP----WLKFMNADNQHLVSPEAID 293
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
L +L+ +D ++R TA EA+ PYF+ + E
Sbjct: 294 FLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/266 (33%), Positives = 141/266 (53%), Gaps = 42/266 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+RY+I +IGKGS+G V A D E VAIK I + ++ A EV+LL L+
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA---QIEVRLLELMNKH 110
Query: 83 D------IVEIKRIMLPPSKREFKD-IYVVFELMESDLHQVIKAND------DLTREHHQ 129
D IV +KR + F++ + +VFE++ +L+ +++ + +LTR+
Sbjct: 111 DTEMKYYIVHLKRHFM------FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRK--- 161
Query: 130 FFLYQMLRALKYMHTA--NVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTV 184
F QM AL ++ T ++ H DLKP+NIL N K +K+ DFG S +
Sbjct: 162 -FAQQMCTALLFLATPELSIIHCDLKPENILL-CNPKRXAIKIVDFG------SSCQLGQ 213
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLIT 244
+ +R+YR+PE+ Y AID+WS+GCI E+ TG+PLF G + V Q++ I
Sbjct: 214 RIYQXIQSRFYRSPEVL--LGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
Query: 245 DLLGTPSPETIAVVRNEKARKYLTEM 270
++LG P + + KARK+ ++
Sbjct: 272 EVLGIPPAHILD--QAPKARKFFEKL 295
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 139/265 (52%), Gaps = 40/265 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+RY+I +IGKGS+G V A D E VAIK I + ++ A EV+LL L+
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA---QIEVRLLELMNKH 110
Query: 83 D------IVEIKRIMLPPSKREFKD-IYVVFELMESDLHQVIKAND------DLTREHHQ 129
D IV +KR + F++ + +VFE++ +L+ +++ + +LTR+
Sbjct: 111 DTEMKYYIVHLKRHFM------FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRK--- 161
Query: 130 FFLYQMLRALKYMHTA--NVYHRDLKPKNILAN--ANCKLKVCDFGLARVAFSDTPMTVF 185
F QM AL ++ T ++ H DLKP+NIL +K+ DFG S +
Sbjct: 162 -FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG------SSCQLGQR 214
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITD 245
+ +R+YR+PE+ Y AID+WS+GCI E+ TG+PLF G + V Q++ I +
Sbjct: 215 IYQXIQSRFYRSPEVL--LGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 272
Query: 246 LLGTPSPETIAVVRNEKARKYLTEM 270
+LG P + + KARK+ ++
Sbjct: 273 VLGIPPAHILD--QAPKARKFFEKL 295
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 139/265 (52%), Gaps = 40/265 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+RY+I +IGKGS+G V A D E VAIK I + ++ A EV+LL L+
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA---QIEVRLLELMNKH 91
Query: 83 D------IVEIKRIMLPPSKREFKD-IYVVFELMESDLHQVIKAND------DLTREHHQ 129
D IV +KR + F++ + +VFE++ +L+ +++ + +LTR+
Sbjct: 92 DTEMKYYIVHLKRHFM------FRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRK--- 142
Query: 130 FFLYQMLRALKYMHTA--NVYHRDLKPKNILAN--ANCKLKVCDFGLARVAFSDTPMTVF 185
F QM AL ++ T ++ H DLKP+NIL +K+ DFG S +
Sbjct: 143 -FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG------SSCQLGQR 195
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITD 245
+ +R+YR+PE+ Y AID+WS+GCI E+ TG+PLF G + V Q++ I +
Sbjct: 196 IYQXIQSRFYRSPEVL--LGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVE 253
Query: 246 LLGTPSPETIAVVRNEKARKYLTEM 270
+LG P + + KARK+ ++
Sbjct: 254 VLGIPPAHILD--QAPKARKFFEKL 276
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 37/332 (11%)
Query: 8 KELKDKDFFT-EYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA 66
KE D + T ++G+ + Y+++ +G+G Y V I+ + EK IK + + +
Sbjct: 15 KEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKK 70
Query: 67 IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRE 126
L L P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 71 KIKREIKILQNLCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDY 125
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLARVAFSDTPMTVF 185
++++Y++L+AL Y H+ + HRD+KP N++ + KL++ D+GLA V
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV- 184
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLIT 244
VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G QL I
Sbjct: 185 ---RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 245 DLLGTPSPETIAVVRNE-------KARKYLTEMRKKPPVPLFQKFPNVD------PLALR 291
+LGT + + V N+ + + +KP + KF N D P A+
Sbjct: 241 KVLGT---DGLNVYLNKYRIELDPQLEALVGRHSRKP----WLKFMNADNQHLVSPEAID 293
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
L +L+ +D ++R TA EA+ PYF+ + E
Sbjct: 294 FLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 23/325 (7%)
Query: 8 KELKDKDFFT-EYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA 66
KE D + T ++G+ + Y+++ +G+G Y V I+ + EK IK + + +
Sbjct: 15 KEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKK 70
Query: 67 IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRE 126
L L P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 71 KIKREIKILQNLXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDY 125
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLARVAFSDTPMTVF 185
++++Y++L+AL Y H+ + HRD+KP N++ + KL++ D+GLA V
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV- 184
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLIT 244
VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G QL I
Sbjct: 185 ---RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 245 DLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVD------PLALRLLQRLIA 298
+LGT + L + + + KF N D P A+ L +L+
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 299 FDPKDRPTAEEALADPYFKGLAKIE 323
+D ++R TA EA+ PYF+ + E
Sbjct: 301 YDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 37/332 (11%)
Query: 8 KELKDKDFFT-EYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA 66
KE D + T ++G+ + Y+++ +G+G Y V I+ + EK IK + + +
Sbjct: 15 KEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKK 70
Query: 67 IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRE 126
L L P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 71 KIKREIKILQNLXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDY 125
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLARVAFSDTPMTVF 185
++++Y++L+AL Y H+ + HRD+KP N++ + KL++ D+GLA V
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV- 184
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLIT 244
VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G QL I
Sbjct: 185 ---RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 245 DLLGTPSPETIAVVRNE-------KARKYLTEMRKKPPVPLFQKFPNVD------PLALR 291
+LGT + + V N+ + + +KP + KF N D P A+
Sbjct: 241 KVLGT---DGLNVYLNKYRIELDPQLEALVGRHSRKP----WLKFMNADNQHLVSPEAID 293
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
L +L+ +D ++R TA EA+ PYF+ + E
Sbjct: 294 FLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 23/325 (7%)
Query: 8 KELKDKDFFT-EYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA 66
KE D + T ++G+ + Y+++ +G+G Y V I+ + EK IK + + +
Sbjct: 15 KEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKK 70
Query: 67 IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRE 126
L L P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 71 KIKREIKILQNLCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDY 125
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLARVAFSDTPMTVF 185
++++Y++L+AL Y H+ + HRD+KP N++ + KL++ D+GLA V
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV- 184
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLIT 244
VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G QL I
Sbjct: 185 ---RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 245 DLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVD------PLALRLLQRLIA 298
+LGT + L + + + KF N D P A+ L +L+
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 299 FDPKDRPTAEEALADPYFKGLAKIE 323
+D ++R TA EA+ PYF+ + E
Sbjct: 301 YDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 160/336 (47%), Gaps = 45/336 (13%)
Query: 8 KELKDKDFFT-EYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA 66
KE D + T ++G+ + Y+++ +G+G Y V I+ + EK IK + + +
Sbjct: 36 KEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKK 91
Query: 67 IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRE 126
L L P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 92 KIKREIKILQNLXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDY 146
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLARVAFSDTPMTVF 185
++++Y++L+AL Y H+ + HRD+KP N++ + KL++ D+GLA V
Sbjct: 147 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV- 205
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLIT 244
VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G QL I
Sbjct: 206 ---RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 261
Query: 245 DLLGTPSPETIAVVRNEKARKYLTEM-----------RKKPPVPLFQKFPNVD------P 287
+LGT N KY E+ +KP + KF N D P
Sbjct: 262 KVLGTDG-------LNAYLNKYRIELDPQLEALVGRHSRKP----WLKFMNADNQHLVSP 310
Query: 288 LALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
A+ L +L+ +D ++R TA EA+ PYF+ + E
Sbjct: 311 EAIDFLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 346
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 23/325 (7%)
Query: 8 KELKDKDFFT-EYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA 66
KE D + T ++G+ + Y+++ +G+G Y V I+ + EK IK + + +
Sbjct: 17 KEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKK 72
Query: 67 IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRE 126
L L P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 73 KIKREIKILQNLCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDY 127
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLARVAFSDTPMTVF 185
++++Y++L+AL Y H+ + HRD+KP N++ + KL++ D+GLA V
Sbjct: 128 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV- 186
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLIT 244
VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G QL I
Sbjct: 187 ---RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 242
Query: 245 DLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVD------PLALRLLQRLIA 298
+LGT + L + + + KF N D P A+ L +L+
Sbjct: 243 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 302
Query: 299 FDPKDRPTAEEALADPYFKGLAKIE 323
+D ++R TA EA+ PYF+ + E
Sbjct: 303 YDHQERLTALEAMTHPYFQQVRAAE 327
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 37/332 (11%)
Query: 8 KELKDKDFFT-EYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA 66
KE D + T ++G+ + Y+++ +G+G Y V I+ + EK IK + + +
Sbjct: 16 KEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKK 71
Query: 67 IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRE 126
L L P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 72 KIKREIKILQNLXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDY 126
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLARVAFSDTPMTVF 185
++++Y++L+AL Y H+ + HRD+KP N++ + KL++ D+GLA V
Sbjct: 127 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV- 185
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLIT 244
VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G QL I
Sbjct: 186 ---RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
Query: 245 DLLGTPSPETIAVVRNE-------KARKYLTEMRKKPPVPLFQKFPNVD------PLALR 291
+LGT + + V N+ + + +KP + KF N D P A+
Sbjct: 242 KVLGT---DGLNVYLNKYRIELDPQLEALVGRHSRKP----WLKFMNADNQHLVSPEAID 294
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
L +L+ +D ++R TA EA+ PYF+ + E
Sbjct: 295 FLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 326
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 156/325 (48%), Gaps = 23/325 (7%)
Query: 8 KELKDKDFFT-EYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA 66
KE D + T ++G+ + Y+++ +G+G Y V I+ + EK IK + + +
Sbjct: 16 KEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKK 71
Query: 67 IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRE 126
L L P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 72 KIKREIKILQNLCGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDY 126
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLARVAFSDTPMTVF 185
++++Y++L+AL Y H+ + HRD+KP N++ + KL++ D+GLA V
Sbjct: 127 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV- 185
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLIT 244
VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G QL I
Sbjct: 186 ---RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
Query: 245 DLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVD------PLALRLLQRLIA 298
+LGT + L + + + KF N D P A+ L +L+
Sbjct: 242 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 301
Query: 299 FDPKDRPTAEEALADPYFKGLAKIE 323
+D ++R TA EA+ PYF+ + E
Sbjct: 302 YDHQERLTALEAMTHPYFQQVRAAE 326
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/332 (27%), Positives = 162/332 (48%), Gaps = 37/332 (11%)
Query: 8 KELKDKDFFT-EYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA 66
KE D + T ++G+ + Y+++ +G+G Y V I+ + EK IK + + +
Sbjct: 15 KEYWDYEALTVQWGEQDDYEVVRKVGRGKYSEVFEGINVNNNEKCIIKIL----KPVKKK 70
Query: 67 IRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTRE 126
L L P+IV++ I+ + K ++FE + + +V+ LT
Sbjct: 71 KIKREIKILQNLXGGPNIVKLLDIV---RDQHSKTPSLIFEYVNNTDFKVLYPT--LTDY 125
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLARVAFSDTPMTVF 185
++++Y++L+AL Y H+ + HRD+KP N++ + KL++ D+GLA V
Sbjct: 126 DIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV- 184
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLIT 244
VA+R+++ PEL Y ++D+WS+GC+FA ++ K P F G QL I
Sbjct: 185 ---RVASRYFKGPELLVD-LQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 245 DLLGTPSPETIAVVRNE-------KARKYLTEMRKKPPVPLFQKFPNVD------PLALR 291
+LGT + + V N+ + + +KP + KF N D P A+
Sbjct: 241 KVLGT---DGLNVYLNKYRIELDPQLEALVGRHSRKP----WLKFMNADNQHLVSPEAID 293
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
L +L+ +D ++R TA EA+ PYF+ + E
Sbjct: 294 FLDKLLRYDHQERLTALEAMTHPYFQQVRAAE 325
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 134/286 (46%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
IG+GS G+VC A + H+G +VA+K + D+ + + + EV ++R +H ++VE+ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM-DLRKQQRREL-LFNEVVIMRDYQHFNVVEMYKS 110
Query: 91 MLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHR 150
L ++++V+ E ++ I + L E +L+AL Y+H V HR
Sbjct: 111 YLVG-----EELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 151 DLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG D P V T ++ APE+ S Y
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFCAQISKDVPKR---KXLVGTPYWMAPEVISR--SLYAT 220
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEM 270
+DIWS+G + E++ G+P + S V + + +
Sbjct: 221 EVDIWSLGIMVIEMVDGEPPYFSDSPV---------------------------QAMKRL 253
Query: 271 RKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
R PP P + V P+ L+R++ DP++R TA+E L P+
Sbjct: 254 RDSPP-PKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 132/298 (44%), Gaps = 44/298 (14%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
IG+GS G+VC A + HTG++VA+KK+ D+ + + + EV ++R H ++V++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM-DLRKQQRREL-LFNEVVIMRDYHHDNVVDMYSS 110
Query: 91 MLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHR 150
L +++VV E +E I + + E +LRAL Y+H V HR
Sbjct: 111 YLVGD-----ELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHR 165
Query: 151 DLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL ++ ++K+ DFG + P V T ++ APE+ Y
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR---KXLVGTPYWMAPEVISRL--PYGT 220
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEM 270
+DIWS+G + E++ G+P + NE + + +
Sbjct: 221 EVDIWSLGIMVIEMIDGEPPY---------------------------FNEPPLQAMRRI 253
Query: 271 RKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSC 328
R P P + V + L ++ +P R TA+E L P+ K+ PSC
Sbjct: 254 RDSLP-PRVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFL----KLAGPPSC 306
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 155/339 (45%), Gaps = 53/339 (15%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEK-VAIKKIHDVFEHISDAIRILREVKLLRLLR 80
+ RY+I++ +G+G++G V ID G + VA+K + +V + +A R E+++L L
Sbjct: 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAAR--SEIQVLEHLN 69
Query: 81 HPDIVEIKR-IMLPPSKREFKDIYVVFELMESDLHQVIKANDDL--TREHHQFFLYQMLR 137
D R + + I +VFEL+ + IK N L +H + YQ+ +
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 138 ALKYMHTANVYHRDLKPKNIL-------------------ANANCKLKVCDFGLARVAFS 178
++ ++H+ + H DLKP+NIL N +KV DFG A +
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYD 187
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVH 238
D + V+TR YRAPE+ + ++ D+WSIGCI E G +FP
Sbjct: 188 DEHHSTL----VSTRHYRAPEVILAL--GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241
Query: 239 QLDLITDLLGTPSPETIAVVRNEKARKYLTE---------------MRKKPPVPLFQKFP 283
L ++ +LG P P+ + ++ + RKY R P+ F
Sbjct: 242 HLAMMERILG-PLPKHM--IQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQ 298
Query: 284 NVDPLAL-RLLQRLIAFDPKDRPTAEEALADPYFKGLAK 321
+V+ L L+Q+++ +DP R T EAL P+F L K
Sbjct: 299 DVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 155/319 (48%), Gaps = 24/319 (7%)
Query: 19 YGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRL 78
+G+ + Y+++ +G+G Y V AI+ E+V +K + + + L L
Sbjct: 34 WGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKIL----KPVKKKKIKREVKILENL 89
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLR 137
+I+++ + P K +VFE + +D Q+ + LT +F++Y++L+
Sbjct: 90 RGGTNIIKLIDTVKDPVS---KTPALVFEYINNTDFKQLYQI---LTDFDIRFYMYELLK 143
Query: 138 ALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA V VA+R+++
Sbjct: 144 ALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNV----RVASRYFK 199
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAE-VLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
PEL + Y ++D+WS+GC+ A + +P F G+ QL I +LGT
Sbjct: 200 GPELLVD-YQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 258
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTAEE 309
+ + ++ + ++ F + V P AL LL +L+ +D + R TA+E
Sbjct: 259 LKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKE 318
Query: 310 ALADPYFKGLAKIEREPSC 328
A+ PYF + K + +PS
Sbjct: 319 AMEHPYFYPVVKEQSQPSA 337
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 135/299 (45%), Gaps = 45/299 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+ Y++ E IGKG++ VV + TG + A K I+ D ++ RE ++ RLL+H
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHS 63
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV R+ S+ F Y+VF+L+ +L + I A + + + Q+L A+ +
Sbjct: 64 NIV---RLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 118
Query: 142 MHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
H V HRDLKP+N+L + CK +K+ DFGLA D W + T Y +P
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSP 175
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL--DLITDLLGTPSPETIA 256
E+ Y +DIW+ G I +L G P F + H+L + PSPE
Sbjct: 176 EVLRK--EAYGKPVDIWACGVILYILLVGYPPFWDED-QHKLYQQIKAGAYDFPSPE--- 229
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ V P A L+ +++ +P R TA EAL P+
Sbjct: 230 -------------------------WDTVTPEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 153/339 (45%), Gaps = 53/339 (15%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEK-VAIKKIHDVFEHISDAIRILREVKLLRLLR 80
+ RY+I++ +G+G++G V ID G + VA+K + +V + +A R E+++L L
Sbjct: 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAAR--SEIQVLEHLN 69
Query: 81 HPDIVEIKR-IMLPPSKREFKDIYVVFELMESDLHQVIKANDDL--TREHHQFFLYQMLR 137
D R + + I +VFEL+ + IK N L +H + YQ+ +
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 138 ALKYMHTANVYHRDLKPKNIL-------------------ANANCKLKVCDFGLARVAFS 178
++ ++H+ + H DLKP+NIL N +KV DFG A +
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA--TYD 187
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVH 238
D + V R YRAPE+ + ++ D+WSIGCI E G +FP
Sbjct: 188 DEHHSTL----VXXRHYRAPEVILAL--GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241
Query: 239 QLDLITDLLGTPSPETIAVVRNEKARKYLTE---------------MRKKPPVPLFQKFP 283
L ++ +LG P P+ + ++ + RKY R P+ F
Sbjct: 242 HLAMMERILG-PLPKHM--IQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQ 298
Query: 284 NVDPLAL-RLLQRLIAFDPKDRPTAEEALADPYFKGLAK 321
+V+ L L+Q+++ +DP R T EAL P+F L K
Sbjct: 299 DVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 140/299 (46%), Gaps = 47/299 (15%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y+ ++ +G G+YG V D T + AIK I S ++L EV +L+LL HP+I
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 85 VEIKRIMLPPSKREF---KDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+++ KR + + Y EL + +H++ + Q+L + Y
Sbjct: 99 MKLYDFF--EDKRNYYLVMECYKGGELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTY 151
Query: 142 MHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
+H N+ HRDLKP+N+L + K +K+ DFGL+ V + M + + T +Y AP
Sbjct: 152 LHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKM----KERLGTAYYIAP 207
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVV 258
E+ KY D+WSIG I +L G P F G+ TD ++
Sbjct: 208 EV---LRKKYDEKCDVWSIGVILFILLAGYPPFGGQ---------TDQ---------EIL 246
Query: 259 RNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
R + KY + P ++ NV A L+++++ FD + R +A++AL P+ K
Sbjct: 247 RKVEKGKYTFD----SP-----EWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 151/339 (44%), Gaps = 51/339 (15%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
RY+I+ +G+G++G V +D G+ +VA+K I +V ++ +A R+ E+ +L+ ++
Sbjct: 29 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY-REAARL--EINVLKKIKEK 85
Query: 83 DIVEIKRIMLPPSKREFKD-IYVVFELMESDLHQVIKAND--DLTREHHQFFLYQMLRAL 139
D +L F + + FEL+ + + +K N+ H + YQ+ AL
Sbjct: 86 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 145
Query: 140 KYMHTANVYHRDLKPKNIL-------------------ANANCKLKVCDFGLARVAFSDT 180
+++H + H DLKP+NIL + N ++V DFG A F
Sbjct: 146 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHE 203
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL 240
T VATR YR PE+ + D+WSIGCI E G LF L
Sbjct: 204 HHTTI----VATRHYRPPEVILEL--GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 257
Query: 241 DLITDLLGTPSPETIAVVR--------------NEKARKYLTEMRKKPPVPLFQKFPNVD 286
++ +LG I R N +Y+ E K P+ + +++
Sbjct: 258 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK--PLKSYMLQDSLE 315
Query: 287 PLAL-RLLQRLIAFDPKDRPTAEEALADPYFKGLAKIER 324
+ L L++R++ FDP R T EAL P+F GL ER
Sbjct: 316 HVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 354
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 151/339 (44%), Gaps = 51/339 (15%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
RY+I+ +G+G++G V +D G+ +VA+K I +V ++ +A R+ E+ +L+ ++
Sbjct: 52 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY-REAARL--EINVLKKIKEK 108
Query: 83 DIVEIKRIMLPPSKREFKD-IYVVFELMESDLHQVIKAND--DLTREHHQFFLYQMLRAL 139
D +L F + + FEL+ + + +K N+ H + YQ+ AL
Sbjct: 109 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 168
Query: 140 KYMHTANVYHRDLKPKNIL-------------------ANANCKLKVCDFGLARVAFSDT 180
+++H + H DLKP+NIL + N ++V DFG A F
Sbjct: 169 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHE 226
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL 240
T VATR YR PE+ + D+WSIGCI E G LF L
Sbjct: 227 HHTTI----VATRHYRPPEVILEL--GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 280
Query: 241 DLITDLLGTPSPETIAVVR--------------NEKARKYLTEMRKKPPVPLFQKFPNVD 286
++ +LG I R N +Y+ E K P+ + +++
Sbjct: 281 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK--PLKSYMLQDSLE 338
Query: 287 PLAL-RLLQRLIAFDPKDRPTAEEALADPYFKGLAKIER 324
+ L L++R++ FDP R T EAL P+F GL ER
Sbjct: 339 HVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 377
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 151/339 (44%), Gaps = 51/339 (15%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
RY+I+ +G+G++G V +D G+ +VA+K I +V ++ +A R+ E+ +L+ ++
Sbjct: 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY-REAARL--EINVLKKIKEK 76
Query: 83 DIVEIKRIMLPPSKREFKD-IYVVFELMESDLHQVIKAND--DLTREHHQFFLYQMLRAL 139
D +L F + + FEL+ + + +K N+ H + YQ+ AL
Sbjct: 77 DKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHAL 136
Query: 140 KYMHTANVYHRDLKPKNIL-------------------ANANCKLKVCDFGLARVAFSDT 180
+++H + H DLKP+NIL + N ++V DFG A F
Sbjct: 137 RFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA--TFDHE 194
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL 240
T VATR YR PE+ + D+WSIGCI E G LF L
Sbjct: 195 HHTTI----VATRHYRPPEVILEL--GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL 248
Query: 241 DLITDLLGTPSPETIAVVR--------------NEKARKYLTEMRKKPPVPLFQKFPNVD 286
++ +LG I R N +Y+ E K P+ + +++
Sbjct: 249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCK--PLKSYMLQDSLE 306
Query: 287 PLAL-RLLQRLIAFDPKDRPTAEEALADPYFKGLAKIER 324
+ L L++R++ FDP R T EAL P+F GL ER
Sbjct: 307 HVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEER 345
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 131/303 (43%), Gaps = 43/303 (14%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
IG+GS G+VC A +G+ VA+KK+ D+ + + + EV ++R +H ++VE+
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRREL-LFNEVVIMRDYQHENVVEMYNS 96
Query: 91 MLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 97 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 151 DLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 206
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEM 270
+DIWS+G + E++ G+P + NE K + +
Sbjct: 207 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 239
Query: 271 RKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQP 330
R P P + V P L RL+ DP R TA E L P+ LAK S P
Sbjct: 240 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF---LAKAGPPASIVP 295
Query: 331 ISK 333
+ +
Sbjct: 296 LMR 298
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 131/303 (43%), Gaps = 43/303 (14%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
IG+GS G+VC A +G+ VA+KK+ D+ + + + EV ++R +H ++VE+
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRREL-LFNEVVIMRDYQHENVVEMYNS 94
Query: 91 MLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 95 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 151 DLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 204
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEM 270
+DIWS+G + E++ G+P + NE K + +
Sbjct: 205 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 237
Query: 271 RKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQP 330
R P P + V P L RL+ DP R TA E L P+ LAK S P
Sbjct: 238 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF---LAKAGPPASIVP 293
Query: 331 ISK 333
+ +
Sbjct: 294 LMR 296
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 131/303 (43%), Gaps = 43/303 (14%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
IG+GS G+VC A +G+ VA+KK+ D+ + + + EV ++R +H ++VE+
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRREL-LFNEVVIMRDYQHENVVEMYNS 85
Query: 91 MLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 86 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 151 DLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 195
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEM 270
+DIWS+G + E++ G+P + NE K + +
Sbjct: 196 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 228
Query: 271 RKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQP 330
R P P + V P L RL+ DP R TA E L P+ LAK S P
Sbjct: 229 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF---LAKAGPPASIVP 284
Query: 331 ISK 333
+ +
Sbjct: 285 LMR 287
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 131/303 (43%), Gaps = 43/303 (14%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
IG+GS G+VC A +G+ VA+KK+ D+ + + + EV ++R +H ++VE+
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRREL-LFNEVVIMRDYQHENVVEMYNS 89
Query: 91 MLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 90 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 151 DLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 199
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEM 270
+DIWS+G + E++ G+P + NE K + +
Sbjct: 200 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 232
Query: 271 RKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQP 330
R P P + V P L RL+ DP R TA E L P+ LAK S P
Sbjct: 233 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF---LAKAGPPASIVP 288
Query: 331 ISK 333
+ +
Sbjct: 289 LMR 291
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 131/303 (43%), Gaps = 43/303 (14%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
IG+GS G+VC A +G+ VA+KK+ D+ + + + EV ++R +H ++VE+
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRREL-LFNEVVIMRDYQHENVVEMYNS 139
Query: 91 MLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 140 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 151 DLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 249
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEM 270
+DIWS+G + E++ G+P + NE K + +
Sbjct: 250 EVDIWSLGIMVIEMVDGEPPY---------------------------FNEPPLKAMKMI 282
Query: 271 RKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREPSCQP 330
R P P + V P L RL+ DP R TA E L P+ LAK S P
Sbjct: 283 RDNLP-PRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF---LAKAGPPASIVP 338
Query: 331 ISK 333
+ +
Sbjct: 339 LMR 341
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 151/312 (48%), Gaps = 24/312 (7%)
Query: 19 YGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRL 78
+G+ + Y+++ +G+G Y V AI+ E+V +K + + + L L
Sbjct: 39 WGNQDDYQLVRKLGRGKYSEVFEAINITNNERVVVKIL----KPVKKKKIKREVKILENL 94
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLR 137
+I+++ + P K +VFE + +D Q+ + LT +F++Y++L+
Sbjct: 95 RGGTNIIKLIDTVKDPVS---KTPALVFEYINNTDFKQLYQI---LTDFDIRFYMYELLK 148
Query: 138 ALKYMHTANVYHRDLKPKNILAN-ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
AL Y H+ + HRD+KP N++ + KL++ D+GLA V VA+R+++
Sbjct: 149 ALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNV----RVASRYFK 204
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAE-VLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
PEL + Y ++D+WS+GC+ A + +P F G+ QL I +LGT
Sbjct: 205 GPELLVD-YQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGY 263
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPN------VDPLALRLLQRLIAFDPKDRPTAEE 309
+ + ++ + ++ F + V P AL LL +L+ +D + R TA+E
Sbjct: 264 LKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKE 323
Query: 310 ALADPYFKGLAK 321
A+ PYF + K
Sbjct: 324 AMEHPYFYPVVK 335
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 124/286 (43%), Gaps = 40/286 (13%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
IG+GS G+VC A +G+ VA+KK+ D+ + + + EV ++R +H ++VE+
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM-DLRKQQRREL-LFNEVVIMRDYQHENVVEMYNS 216
Query: 91 MLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHR 150
L +++VV E +E I + + E +L+AL +H V HR
Sbjct: 217 YL-----VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 151 DLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTP 210
D+K +IL + ++K+ DFG + P V T ++ APEL Y P
Sbjct: 272 DIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR---KXLVGTPYWMAPELISRL--PYGP 326
Query: 211 AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEM 270
+DIWS+G + E++ G+P + + + + +I D L
Sbjct: 327 EVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL----------------------- 363
Query: 271 RKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
P + V P L RL+ DP R TA E L P+
Sbjct: 364 -----PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 48/307 (15%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHD-VFEHISDAIRILREVKLLRLLR 80
++RYK V+GKGS+G V D TG++ A+K I + +D +LREV+LL+ L
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 81 HPDIVEIKRIMLPPSKREF---KDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR 137
HP+I+++ K F ++Y EL + + + + D R + Q+L
Sbjct: 91 HPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-----IIRQVLS 143
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ YMH + HRDLKP+N+L + K +++ DFGL+ + M D + T +
Sbjct: 144 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM----KDKIGTAY 199
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
Y APE+ Y D+WS G I +L+G P F G ++ D++ +
Sbjct: 200 YIAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNG---ANEYDILKKV-------- 245
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
EK KY E+ P ++K V A L+++++ + P R +A +AL
Sbjct: 246 ------EKG-KYTFEL------PQWKK---VSESAKDLIRKMLTYVPSMRISARDALDHE 289
Query: 315 YFKGLAK 321
+ + K
Sbjct: 290 WIQTYTK 296
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 21/219 (9%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHD-VFEHISDAIRILREVKLLRLLR 80
++RYK V+GKGS+G V D TG++ A+K I + +D +LREV+LL+ L
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 107
Query: 81 HPDIVEIKRIMLPPSKREF---KDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR 137
HP+I+++ K F ++Y EL + + + + D R + Q+L
Sbjct: 108 HPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-----IIRQVLS 160
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ YMH + HRDLKP+N+L + K +++ DFGL+ + M D + T +
Sbjct: 161 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM----KDKIGTAY 216
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 233
Y APE+ Y D+WS G I +L+G P F G
Sbjct: 217 YIAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNG 252
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 21/219 (9%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHD-VFEHISDAIRILREVKLLRLLR 80
++RYK V+GKGS+G V D TG++ A+K I + +D +LREV+LL+ L
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 108
Query: 81 HPDIVEIKRIMLPPSKREF---KDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR 137
HP+I+++ K F ++Y EL + + + + D R + Q+L
Sbjct: 109 HPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-----IIRQVLS 161
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ YMH + HRDLKP+N+L + K +++ DFGL+ + M D + T +
Sbjct: 162 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM----KDKIGTAY 217
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 233
Y APE+ Y D+WS G I +L+G P F G
Sbjct: 218 YIAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNG 253
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 110/219 (50%), Gaps = 21/219 (9%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHD-VFEHISDAIRILREVKLLRLLR 80
++RYK V+GKGS+G V D TG++ A+K I + +D +LREV+LL+ L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 81 HPDIVEIKRIMLPPSKREF---KDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR 137
HP+I+++ K F ++Y EL + + + + D R + Q+L
Sbjct: 85 HPNIMKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-----IIRQVLS 137
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ YMH + HRDLKP+N+L + K +++ DFGL+ + M D + T +
Sbjct: 138 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM----KDKIGTAY 193
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 233
Y APE+ Y D+WS G I +L+G P F G
Sbjct: 194 YIAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 148/330 (44%), Gaps = 45/330 (13%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y++ E +GKG++ VV + ++ A K I+ D ++ RE ++ RLL+HP+I
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 92
Query: 85 VEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V R+ S+ F Y+VF+L+ +L + I A + + ++Q+L ++ ++H
Sbjct: 93 V---RLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH 147
Query: 144 TANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
++ HRDLKP+N+L + CK +K+ DFGLA + W + T Y +PE+
Sbjct: 148 QHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQA---WFGFAGTPGYLSPEV 204
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL--DLITDLLGTPSPETIAVV 258
Y +DIW+ G I +L G P F + H+L + PSPE
Sbjct: 205 LRK--DPYGKPVDIWACGVILYILLVGYPPFWDED-QHKLYQQIKAGAYDFPSPE----- 256
Query: 259 RNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
+ V P A L+ +++ +P R TA++AL P+
Sbjct: 257 -----------------------WDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQ 293
Query: 319 LAKIEREPSCQPISKLEFEFERRRVTKDDI 348
+ + Q + +F RR K I
Sbjct: 294 RSTVASMMHRQETVECLRKFNARRKLKGAI 323
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 122/245 (49%), Gaps = 18/245 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAI-RILREVKLLRLLRH 81
Y + + +G G++G V TG KVA+K ++ D + +I RE++ L+L RH
Sbjct: 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH 75
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALK 140
P I+++ +++ PS DI++V E + +L I N L + + Q+L +
Sbjct: 76 PHIIKLYQVISTPS-----DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVD 130
Query: 141 YMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE- 199
Y H V HRDLKP+N+L +A+ K+ DFGL+ + SD F + Y APE
Sbjct: 131 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM-MSDGE---FLRXSCGSPNYAAPEV 186
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITD-LLGTP---SPETI 255
+ G ++ P +DIWS G I +L G F V I D + TP +P I
Sbjct: 187 ISGRLYA--GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVI 244
Query: 256 AVVRN 260
+++++
Sbjct: 245 SLLKH 249
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 136/300 (45%), Gaps = 45/300 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+ Y++ E +GKG++ VV + TG++ A K I+ D ++ RE ++ RLL+HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV R+ S+ F Y+VF+L+ +L + I A + + + Q+L ++ +
Sbjct: 64 NIV---RLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 142 MHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
H + HRDLKP+N+L + K +K+ DFGLA D W + T Y +P
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSP 175
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL--DLITDLLGTPSPETIA 256
E+ Y +D+W+ G I +L G P F + H+L + PSPE
Sbjct: 176 EVLRK--DPYGKPVDMWACGVILYILLVGYPPFWDED-QHRLYQQIKAGAYDFPSPE--- 229
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ V P A L+ +++ +P R TA EAL P+
Sbjct: 230 -------------------------WDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 136/300 (45%), Gaps = 45/300 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+ Y++ E +GKG++ VV + TG++ A K I+ D ++ RE ++ RLL+HP
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 63
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV R+ S+ F Y+VF+L+ +L + I A + + + Q+L ++ +
Sbjct: 64 NIV---RLHDSISEEGFH--YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNH 118
Query: 142 MHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
H + HRDLKP+N+L + K +K+ DFGLA D W + T Y +P
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQA---WFGFAGTPGYLSP 175
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL--DLITDLLGTPSPETIA 256
E+ Y +D+W+ G I +L G P F + H+L + PSPE
Sbjct: 176 EVLRK--DPYGKPVDMWACGVILYILLVGYPPFWDED-QHRLYQQIKAGAYDFPSPE--- 229
Query: 257 VVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ V P A L+ +++ +P R TA EAL P+
Sbjct: 230 -------------------------WDTVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 30 VIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
V+GKG+YG+V A D ++AIK+I + S + E+ L + L+H +IV+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQY-- 84
Query: 90 IMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQ---FFLYQMLRALKYMHTAN 146
+ S+ F I++ ++ L ++++ +++ Q F+ Q+L LKY+H
Sbjct: 85 -LGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 147 VYHRDLKPKNILANA-NCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
+ HRD+K N+L N + LK+ DFG ++ P T +T T Y APE+
Sbjct: 143 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGP 199
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A DIWS+GC E+ TGKP F
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 13/216 (6%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
Y++L+ IGKG++ V A TG++VA+K I + S ++ REV+++++L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 74 NIVKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +K+ DFG + + F + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF----CGSPPYAAPELF 184
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSV 236
KY P +D+WS+G I +++G F G+++
Sbjct: 185 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 138/309 (44%), Gaps = 58/309 (18%)
Query: 20 GDANRYKILE-VIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRL 78
GD N+Y LE IG+GS+G V A+ T + A KKI F + D R +E+++++
Sbjct: 22 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKS 79
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFEL------MESDLHQVIKANDDLTREHHQFFL 132
L HP+I+ + + DIY+V EL E +H+ + D R +
Sbjct: 80 LDHPNIIRLYETF-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR-----IM 129
Query: 133 YQMLRALKYMHTANVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+L A+ Y H NV HRDLKP+N L + + LK+ DFGLA F M
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-ARFKPGKMM---RTK 185
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
V T +Y +P++ Y P D WS G + +L G P F + + I + GT
Sbjct: 186 VGTPYYVSPQVLEGL---YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT 240
Query: 250 PS-PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAE 308
+ PE + + NV P A L++RL+ PK R T+
Sbjct: 241 FTFPE--------------------------KDWLNVSPQAESLIRRLLTKSPKQRITSL 274
Query: 309 EALADPYFK 317
+AL +F+
Sbjct: 275 QALEHEWFE 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 13/206 (6%)
Query: 30 VIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
V+GKG+YG+V A D ++AIK+I + S + E+ L + L+H +IV+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLH--EEIALHKHLKHKNIVQY-- 70
Query: 90 IMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQ---FFLYQMLRALKYMHTAN 146
+ S+ F I++ ++ L ++++ +++ Q F+ Q+L LKY+H
Sbjct: 71 -LGSFSENGFIKIFME-QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ 128
Query: 147 VYHRDLKPKNILANA-NCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
+ HRD+K N+L N + LK+ DFG ++ P T +T T Y APE+
Sbjct: 129 IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GTLQYMAPEIIDKGP 185
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y A DIWS+GC E+ TGKP F
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 114/216 (52%), Gaps = 13/216 (6%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
Y++L+ IGKG++ V A TG++VA+K I + S ++ REV+++++L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 74 NIVKLFEVI-----ETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +K+ DFG + + F + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF----CGSPPYAAPELF 184
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSV 236
KY P +D+WS+G I +++G F G+++
Sbjct: 185 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 148/333 (44%), Gaps = 46/333 (13%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
++ Y + E +GKG++ VV + TG + A K I+ D ++ RE ++ R L+H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALK 140
P+IV L S +E Y+VF+L+ +L + I A + + + Q+L ++
Sbjct: 88 PNIVR-----LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 142
Query: 141 YMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
Y H+ + HR+LKP+N+L + K +K+ DFGLA + +D+ W + T Y +
Sbjct: 143 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLS 198
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL--DLITDLLGTPSPETI 255
PE+ Y+ +DIW+ G I +L G P F + H+L + PSPE
Sbjct: 199 PEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYPSPE-- 253
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ V P A L+ ++ +PK R TA++AL P+
Sbjct: 254 --------------------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 287
Query: 316 FKGLAKIEREPSCQPISKLEFEFERRRVTKDDI 348
++ Q +F RR K I
Sbjct: 288 ICNRERVASAIHRQDTVDCLKKFNARRKLKGAI 320
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/309 (29%), Positives = 138/309 (44%), Gaps = 58/309 (18%)
Query: 20 GDANRYKILE-VIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRL 78
GD N+Y LE IG+GS+G V A+ T + A KKI F + D R +E+++++
Sbjct: 5 GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VEDVDRFKQEIEIMKS 62
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFEL------MESDLHQVIKANDDLTREHHQFFL 132
L HP+I+ + + DIY+V EL E +H+ + D R +
Sbjct: 63 LDHPNIIRLYETF-----EDNTDIYLVMELCTGGELFERVVHKRVFRESDAAR-----IM 112
Query: 133 YQMLRALKYMHTANVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+L A+ Y H NV HRDLKP+N L + + LK+ DFGLA F M
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLA-ARFKPGKMM---RTK 168
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
V T +Y +P++ Y P D WS G + +L G P F + + I + GT
Sbjct: 169 VGTPYYVSPQVLEGL---YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIRE--GT 223
Query: 250 PS-PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAE 308
+ PE + + NV P A L++RL+ PK R T+
Sbjct: 224 FTFPE--------------------------KDWLNVSPQAESLIRRLLTKSPKQRITSL 257
Query: 309 EALADPYFK 317
+AL +F+
Sbjct: 258 QALEHEWFE 266
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 137/295 (46%), Gaps = 49/295 (16%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G++G V + +G + IK I+ + +I E+++L+ L HP+I++I +
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME-QIEAEIEVLKSLDHPNIIKIFEV 88
Query: 91 MLPPSKREFKDIYVVFELMESD--LHQVIKA---NDDLTREHHQFFLYQMLRALKYMHTA 145
++ ++Y+V E E L +++ A L+ + + QM+ AL Y H+
Sbjct: 89 F-----EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ 143
Query: 146 NVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
+V H+DLKP+NIL + + +K+ DFGLA + SD T+ T Y APE+
Sbjct: 144 HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE----HSTNAAGTALYMAPEV-- 197
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
F T DIWS G + +LTG F G S+ E + K
Sbjct: 198 -FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL----------------EEVQQKATYK 240
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
Y E R PL P A+ LL++++ DP+ RP+A + L +FK
Sbjct: 241 EPNYAVECR-----PL-------TPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 139/300 (46%), Gaps = 46/300 (15%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
++ Y + E +GKG++ VV + TG + A K I+ D ++ RE ++ R L+H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALK 140
P+IV L S +E Y+VF+L+ +L + I A + + + Q+L ++
Sbjct: 65 PNIVR-----LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 141 YMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
Y H+ + HR+LKP+N+L + K +K+ DFGLA + +D+ W + T Y +
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLS 175
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL--DLITDLLGTPSPETI 255
PE+ Y+ +DIW+ G I +L G P F + H+L + PSPE
Sbjct: 176 PEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYPSPE-- 230
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ V P A L+ ++ +PK R TA++AL P+
Sbjct: 231 --------------------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 139/301 (46%), Gaps = 46/301 (15%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
++ Y + E +GKG++ VV + TG + A K I+ D ++ RE ++ R L+H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALK 140
P+IV L S +E Y+VF+L+ +L + I A + + + Q+L ++
Sbjct: 65 PNIVR-----LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 141 YMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
Y H+ + HR+LKP+N+L + K +K+ DFGLA + +D+ W + T Y +
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLS 175
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL--DLITDLLGTPSPETI 255
PE+ Y+ +DIW+ G I +L G P F + H+L + PSPE
Sbjct: 176 PEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYPSPE-- 230
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ V P A L+ ++ +PK R TA++AL P+
Sbjct: 231 --------------------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264
Query: 316 F 316
Sbjct: 265 I 265
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 144/313 (46%), Gaps = 49/313 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
Y++L+ IGKG++ V A TG +VAIK I + + ++ REV+++++L HP
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV++ ++ K +Y++ E ++ + A+ + + + Q++ A++Y
Sbjct: 72 NIVKLFEVIETE-----KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 126
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +K+ DFG + + F + Y APEL
Sbjct: 127 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTF----CGSPPYAAPELF 182
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
KY P +D+WS+G I +++G F G+++
Sbjct: 183 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------------------------ 216
Query: 261 EKARKYLTE--MRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK- 317
K L E +R K +P + + LL+R + +P R T E+ + D +
Sbjct: 217 ----KELRERVLRGKYRIPFY-----MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 267
Query: 318 GLAKIEREPSCQP 330
G + E +P +P
Sbjct: 268 GHEEDELKPFVEP 280
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 139/301 (46%), Gaps = 46/301 (15%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
++ Y + E +GKG++ VV + TG + A K I+ D ++ RE ++ R L+H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALK 140
P+IV L S +E Y+VF+L+ +L + I A + + + Q+L ++
Sbjct: 64 PNIVR-----LHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 118
Query: 141 YMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
Y H+ + HR+LKP+N+L + K +K+ DFGLA + +D+ W + T Y +
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-IEVNDSEA---WHGFAGTPGYLS 174
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL--DLITDLLGTPSPETI 255
PE+ Y+ +DIW+ G I +L G P F + H+L + PSPE
Sbjct: 175 PEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDED-QHRLYAQIKAGAYDYPSPE-- 229
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
+ V P A L+ ++ +PK R TA++AL P+
Sbjct: 230 --------------------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 263
Query: 316 F 316
Sbjct: 264 I 264
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 13/216 (6%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
Y++L+ IGKG++ V A TG++VA+K I + S ++ REV+++++L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 74 NIVKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +K+ DFG + + F Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAF----CGAPPYAAPELF 184
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSV 236
KY P +D+WS+G I +++G F G+++
Sbjct: 185 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 114/216 (52%), Gaps = 13/216 (6%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
Y++L+ IGKG++ V A TG++VA++ I + S ++ REV+++++L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 74 NIVKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +K+ DFG + + F + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF----CGSPPYAAPELF 184
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSV 236
KY P +D+WS+G I +++G F G+++
Sbjct: 185 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 145/314 (46%), Gaps = 49/314 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
Y++L+ IGKG++ V A TG++VA+K I + S ++ REV+++++L HP
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 67 NIVKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY 121
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +K+ DFG + + F + Y APEL
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF----CGSPPYAAPELF 177
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
KY P +D+WS+G I +++G F G+++
Sbjct: 178 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------------------------ 211
Query: 261 EKARKYLTE--MRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK- 317
K L E +R K +P + + LL++ + +P R T E+ + D +
Sbjct: 212 ----KELRERVLRGKYRIPFY-----MSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNV 262
Query: 318 GLAKIEREPSCQPI 331
G E +P +P+
Sbjct: 263 GHEDDELKPYVEPL 276
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 116/217 (53%), Gaps = 15/217 (6%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
Y++L+ IGKG++ V A TG++VA++ I + S ++ REV+++++L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 74 NIVKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 128
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLAR-VAFSDTPMTVFWTDYVATRWYRAPEL 200
H + HRDLK +N+L +A+ +K+ DFG + F + ++ + Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK-----LDEFCGSPPYAAPEL 183
Query: 201 CGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSV 236
KY P +D+WS+G I +++G F G+++
Sbjct: 184 FQG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 137/301 (45%), Gaps = 44/301 (14%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRL 78
G ++RY+ ++ +G G+YG V D TG + AIK I S++ +L EV +L+
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLR 137
L HP+I+++ KR + Y+V E+ +L I + + Q+L
Sbjct: 61 LDHPNIMKLYEFF--EDKRNY---YLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS 115
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
Y+H N+ HRDLKP+N+L + + +K+ DFGL+ M + + T +
Sbjct: 116 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM----KERLGTAY 171
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
Y APE+ KY D+WS G I +L G P F G++ +
Sbjct: 172 YIAPEV---LRKKYDEKCDVWSCGVILYILLCGYPPFGGQT-----------------DQ 211
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+ R EK + PP + V A +L++ ++ ++P R +AEEAL P
Sbjct: 212 EILKRVEKGK-----FSFDPP-----DWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHP 261
Query: 315 Y 315
+
Sbjct: 262 W 262
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 137/301 (45%), Gaps = 44/301 (14%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRL 78
G ++RY+ ++ +G G+YG V D TG + AIK I S++ +L EV +L+
Sbjct: 18 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 77
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLR 137
L HP+I+++ KR + Y+V E+ +L I + + Q+L
Sbjct: 78 LDHPNIMKLYEFF--EDKRNY---YLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLS 132
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
Y+H N+ HRDLKP+N+L + + +K+ DFGL+ M + + T +
Sbjct: 133 GTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM----KERLGTAY 188
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
Y APE+ KY D+WS G I +L G P F G++ +
Sbjct: 189 YIAPEV---LRKKYDEKCDVWSCGVILYILLCGYPPFGGQT-----------------DQ 228
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+ R EK + PP + V A +L++ ++ ++P R +AEEAL P
Sbjct: 229 EILKRVEKGK-----FSFDPP-----DWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHP 278
Query: 315 Y 315
+
Sbjct: 279 W 279
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 143/313 (45%), Gaps = 49/313 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
Y++L+ IGKG++ V A TG +VAIK I + + ++ REV+++++L HP
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV++ ++ K +Y++ E ++ + A+ + + + Q++ A++Y
Sbjct: 75 NIVKLFEVIETE-----KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY 129
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +K+ DFG + + F Y APEL
Sbjct: 130 CHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAF----CGAPPYAAPELF 185
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
KY P +D+WS+G I +++G F G+++
Sbjct: 186 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------------------------ 219
Query: 261 EKARKYLTE--MRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK- 317
K L E +R K +P + + LL+R + +P R T E+ + D +
Sbjct: 220 ----KELRERVLRGKYRIPFY-----MSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINA 270
Query: 318 GLAKIEREPSCQP 330
G + E +P +P
Sbjct: 271 GHEEDELKPFVEP 283
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 115/218 (52%), Gaps = 15/218 (6%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAI-RILREVKLLRLLRHP 82
RYKI++ +G G V A DT KVAIK I + + R REV L H
Sbjct: 12 RYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQ 71
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV + + E Y+V E +E L + I+++ L+ + F Q+L +K+
Sbjct: 72 NIVSMIDV-----DEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKH 126
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV-ATRWYRAPEL 200
H + HRD+KP+NIL ++N LK+ DFG+A+ A S+T +T T++V T Y +PE
Sbjct: 127 AHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAK-ALSETSLT--QTNHVLGTVQYFSPEQ 183
Query: 201 C-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
G + T DI+SIG + E+L G+P F G++ V
Sbjct: 184 AKGEATDECT---DIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 107/216 (49%), Gaps = 13/216 (6%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y L+ IG+GS+G T G + IK+I+ + REV +L ++HP+
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQF--FLYQMLRALK 140
IV+ + S E +Y+V + E DL + I A + + Q + Q+ ALK
Sbjct: 85 IVQYRE-----SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139
Query: 141 YMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
++H + HRD+K +NI + +++ DFG+ARV S + + T +Y +PE+
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELA---RACIGTPYYLSPEI 196
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSV 236
C + Y DIW++GC+ E+ T K F S+
Sbjct: 197 CEN--KPYNNKSDIWALGCVLYELCTLKHAFEAGSM 230
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 132/298 (44%), Gaps = 45/298 (15%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y++ E +GKG++ VV + G++ A K I+ D ++ RE ++ RLL+HP+I
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 85 VEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V L S E Y++F+L+ +L + I A + + + Q+L A+ + H
Sbjct: 84 VR-----LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 138
Query: 144 TANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
V HRDLKP+N+L + K +K+ DFGLA + W + T Y +PE+
Sbjct: 139 QMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA---WFGFAGTPGYLSPEV 195
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL--DLITDLLGTPSPETIAVV 258
Y +D+W+ G I +L G P F + H+L + PSPE
Sbjct: 196 LRK--DPYGKPVDLWACGVILYILLVGYPPFWDED-QHRLYQQIKAGAYDFPSPE----- 247
Query: 259 RNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
+ V P A L+ +++ +P R TA EAL P+
Sbjct: 248 -----------------------WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%), Gaps = 19/223 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAI-RILREVKLLRLLRHPD 83
+K+ ++GKGS+ V A HTG +VAIK I + + + R+ EVK+ L+HP
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPS 72
Query: 84 IVEIKRIMLPPSKREFKD---IYVVFELMES-DLHQVIKAN-DDLTREHHQFFLYQMLRA 138
I+E+ F+D +Y+V E+ + ++++ +K + + F++Q++
Sbjct: 73 ILELYNY--------FEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITG 124
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
+ Y+H+ + HRDL N+L N +K+ DFGLA P +T T Y +P
Sbjct: 125 MLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYT-LCGTPNYISP 181
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLD 241
E+ S + D+WS+GC+F +L G+P F +V + L+
Sbjct: 182 EIATR--SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN 222
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 144/331 (43%), Gaps = 74/331 (22%)
Query: 31 IGKGSYG--VVCAAIDTHTGEKV-AIKKIHDVFEHISDAIR--------ILREVKLLRLL 79
+G G+YG ++C + H+ + + IKK SD + I E+ LL+ L
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQF------- 130
HP+I+++ + K+ F Y+V E E Q+I H+F
Sbjct: 104 DHPNIIKLFDVF--EDKKYF---YLVTEFYEGGELFEQIIN--------RHKFDECDAAN 150
Query: 131 FLYQMLRALKYMHTANVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDTPMTVFWT 187
+ Q+L + Y+H N+ HRD+KP+NIL N+ +K+ DFGL+ D +
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKL----R 206
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLL 247
D + T +Y APE+ KY D+WS G I +L G P F G+ + D+I +
Sbjct: 207 DRLGTAYYIAPEVLK---KKYNEKCDVWSCGVIMYILLCGYPPFGGQ---NDQDIIKKV- 259
Query: 248 GTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTA 307
EK + Y F + N+ A L++ ++ +D R TA
Sbjct: 260 -------------EKGKYYFD----------FNDWKNISDEAKELIKLMLTYDYNKRCTA 296
Query: 308 EEALADPYFKGLA----KIEREPSCQPISKL 334
EEAL + K A K +++ C +S +
Sbjct: 297 EEALNSRWIKKYANNINKSDQKTLCGALSNM 327
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 108/219 (49%), Gaps = 21/219 (9%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHD-VFEHISDAIRILREVKLLRLLR 80
++RYK V+GKGS+G V D TG++ A+K I + +D +LREV+LL+ L
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84
Query: 81 HPDIVEIKRIMLPPSKREF---KDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR 137
HP+I ++ K F ++Y EL + + + + D R + Q+L
Sbjct: 85 HPNIXKLYEFF--EDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAAR-----IIRQVLS 137
Query: 138 ALKYMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ Y H + HRDLKP+N+L + K +++ DFGL+ F + D + T +
Sbjct: 138 GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS-THFEASKKX---KDKIGTAY 193
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 233
Y APE+ Y D+WS G I +L+G P F G
Sbjct: 194 YIAPEV---LHGTYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 129/254 (50%), Gaps = 22/254 (8%)
Query: 16 FTEYGDAN--RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-ILRE 72
F E D N ++IL IGKGS+G VC T + A+K ++ + +R + +E
Sbjct: 6 FDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKE 65
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFF 131
+++++ L HP +V L S ++ +D+++V +L+ DL ++ N E + F
Sbjct: 66 LQIMQGLEHPFLVN-----LWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLF 120
Query: 132 LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVA 191
+ +++ AL Y+ + HRD+KP NIL + + + + DF +A + +T +T
Sbjct: 121 ICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTM----AG 176
Query: 192 TRWYRAPELCGSF-FSKYTPAIDIWSIGCIFAEVLTGKPLF------PGKSVVHQLDLIT 244
T+ Y APE+ S + Y+ A+D WS+G E+L G+ + K +VH + T
Sbjct: 177 TKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE--T 234
Query: 245 DLLGTPSPETIAVV 258
++ PS + +V
Sbjct: 235 TVVTYPSAWSQEMV 248
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAI-RILREVKLLRLLRH 81
Y + + +G G++G V TG KVA+K ++ D + +I RE++ L+L RH
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALK 140
P I+++ +++ P+ D ++V E + +L I + + + Q+L A+
Sbjct: 71 PHIIKLYQVISTPT-----DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 141 YMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE- 199
Y H V HRDLKP+N+L +A+ K+ DFGL+ + SD F D + Y APE
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM-MSDGE---FLRDSCGSPNYAAPEV 181
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
+ G ++ P +DIWS G I +L G
Sbjct: 182 ISGRLYA--GPEVDIWSCGVILYALLCG 207
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 142/305 (46%), Gaps = 51/305 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISD----AIRILREVKLLRLLR 80
Y++ EVIGKG++ VV I+ TG++ A+K I DV + S + RE + +L+
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELME-SDL-HQVIKANDD---LTREHHQFFLYQM 135
HP IVE+ +Y+VFE M+ +DL +++K D + ++ Q+
Sbjct: 85 HPHIVELLETYSSDGM-----LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 136 LRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
L AL+Y H N+ HRD+KP+N+L + + +K+ DFG+A + ++ + V T
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVA--GGRVGT 196
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
+ APE+ Y +D+W G I +L+G F GT
Sbjct: 197 PHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPF---------------YGTKER 239
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALA 312
+++ KY R ++ ++ A L++R++ DP +R T EAL
Sbjct: 240 LFEGIIKG----KYKMNPR---------QWSHISESAKDLVRRMLMLDPAERITVYEALN 286
Query: 313 DPYFK 317
P+ K
Sbjct: 287 HPWLK 291
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 109/227 (48%), Gaps = 24/227 (10%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRLL 79
A Y++L IG GSYG C I + K+ + K D + +++A + ++ EV LLR L
Sbjct: 5 AEDYEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLREL 62
Query: 80 RHPDIVEI-KRIMLPPSKREFKDIYVVFELMES-DLHQVI----KANDDLTREHHQFFLY 133
+HP+IV RI+ R +Y+V E E DL VI K L E +
Sbjct: 63 KHPNIVRYYDRII----DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 134 QMLRALKYMHTAN-----VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTD 188
Q+ ALK H + V HRDLKP N+ + +K+ DFGLAR+ DT F
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---FAKT 175
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKS 235
+V T +Y +PE Y DIWS+GC+ E+ P F S
Sbjct: 176 FVGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 111/216 (51%), Gaps = 13/216 (6%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
Y++L+ IGKG++ V A TG++VA+K I + S ++ REV++ ++L HP
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + Q++ A++Y
Sbjct: 74 NIVKLFEVIETE-----KTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQY 128
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
H + HRDLK +N+L +A+ +K+ DFG + + F Y APEL
Sbjct: 129 CHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAF----CGAPPYAAPELF 184
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSV 236
KY P +D+WS+G I +++G F G+++
Sbjct: 185 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 218
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 109/227 (48%), Gaps = 24/227 (10%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRLL 79
A Y++L IG GSYG C I + K+ + K D + +++A + ++ EV LLR L
Sbjct: 5 AEDYEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLREL 62
Query: 80 RHPDIVEI-KRIMLPPSKREFKDIYVVFELMES-DLHQVI----KANDDLTREHHQFFLY 133
+HP+IV RI+ R +Y+V E E DL VI K L E +
Sbjct: 63 KHPNIVRYYDRII----DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 134 QMLRALKYMHTAN-----VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTD 188
Q+ ALK H + V HRDLKP N+ + +K+ DFGLAR+ DT F
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS---FAKA 175
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKS 235
+V T +Y +PE Y DIWS+GC+ E+ P F S
Sbjct: 176 FVGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 153/361 (42%), Gaps = 54/361 (14%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y++ E +GKG++ VV + G++ A I+ D ++ RE ++ RLL+HP+I
Sbjct: 13 YQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNI 72
Query: 85 VEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V L S E Y++F+L+ +L + I A + + + Q+L A+ + H
Sbjct: 73 VR-----LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH 127
Query: 144 TANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
V HR+LKP+N+L + K +K+ DFGLA + W + T Y +PE+
Sbjct: 128 QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQA---WFGFAGTPGYLSPEV 184
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL--DLITDLLGTPSPETIAVV 258
Y +D+W+ G I +L G P F + H+L + PSPE
Sbjct: 185 LRK--DPYGKPVDLWACGVILYILLVGYPPFWDED-QHRLYQQIKAGAYDFPSPE----- 236
Query: 259 RNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
+ V P A L+ +++ +P R TA EAL P+
Sbjct: 237 -----------------------WDTVTPEAKDLINKMLTINPSKRITAAEALKHPWISH 273
Query: 319 LAKIEREPSCQPISKLEFEFERRRVTKDDIRELIY---------REILEYHPQLLKDYIN 369
+ + Q +F RR K I ++ +EI++ QL++ N
Sbjct: 274 RSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQLIEAISN 333
Query: 370 G 370
G
Sbjct: 334 G 334
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 72 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 179
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 180 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 221
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 222 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269
Query: 312 ADPYFK 317
P+ K
Sbjct: 270 QHPWIK 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 111/216 (51%), Gaps = 13/216 (6%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
Y++ + IGKG++ V A TG +VA+K I + + ++ REV+++++L HP
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+IV++ ++ K +Y+V E ++ + A+ + + + Q++ A++Y
Sbjct: 75 NIVKLFEVIETE-----KTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQY 129
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
H + HRDLK +N+L + + +K+ DFG + + F + Y APEL
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTF----CGSPPYAAPELF 185
Query: 202 GSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSV 236
KY P +D+WS+G I +++G F G+++
Sbjct: 186 QG--KKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 72 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 126
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 127 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 179
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 180 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 221
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 222 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269
Query: 312 ADPYFK 317
P+ K
Sbjct: 270 QHPWIK 275
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 121/239 (50%), Gaps = 18/239 (7%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y E IG+G+ G V A+D TG++VAI++++ + I+ E+ ++R ++P+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
IV L +++VV E + + + + L+AL+++H
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGL-ARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
+ V HRD+K NIL + +K+ DFG A++ TP ++ V T ++ APE+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI----TPEQSKRSEMVGTPYWMAPEVVT 189
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTP---SPETIAVV 258
Y P +DIWS+G + E++ G+P + ++ + L LI GTP +PE ++ +
Sbjct: 190 R--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNPEKLSAI 245
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 136/306 (44%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-----GTPA 182
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
+ APE+ Y P D+WSIG I +L+G F LG
Sbjct: 183 FVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 18/250 (7%)
Query: 18 EYGDANRYKILEVIGKGSYG---VVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVK 74
E D +++++L+V+G+GS+G +V + + A+K + + D +R E
Sbjct: 19 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD 78
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
+L + HP IV++ K +Y++ + + DL + T E +F+L
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 133
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
++ AL ++H+ + +RDLKP+NIL + +K+ DFGL++ + + T
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTV 190
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDL-LGTP-- 250
Y APE+ +T + D WS G + E+LTG F GK + +I LG P
Sbjct: 191 EYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF 248
Query: 251 -SPETIAVVR 259
SPE +++R
Sbjct: 249 LSPEAQSLLR 258
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 109/227 (48%), Gaps = 24/227 (10%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRLL 79
A Y++L IG GSYG C I + K+ + K D + +++A + ++ EV LLR L
Sbjct: 5 AEDYEVLYTIGTGSYGR-CQKIRRKSDGKILVWKELD-YGSMTEAEKQMLVSEVNLLREL 62
Query: 80 RHPDIVEI-KRIMLPPSKREFKDIYVVFELMES-DLHQVI----KANDDLTREHHQFFLY 133
+HP+IV RI+ R +Y+V E E DL VI K L E +
Sbjct: 63 KHPNIVRYYDRII----DRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118
Query: 134 QMLRALKYMHTAN-----VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTD 188
Q+ ALK H + V HRDLKP N+ + +K+ DFGLAR+ D F +
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED---FAKE 175
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKS 235
+V T +Y +PE Y DIWS+GC+ E+ P F S
Sbjct: 176 FVGTPYYMSPEQMNRM--SYNEKSDIWSLGCLLYELCALMPPFTAFS 220
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 133/306 (43%), Gaps = 55/306 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHIS----DAIRILREVKLLRLLR 80
Y E +G G + VV + TG + A K I S I REV +L+ ++
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+++ + + + D+ ++ EL+ +L + + LT E FL Q+L +
Sbjct: 73 HPNVITLHEVYENKT-----DVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127
Query: 140 KYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
Y+H+ + H DLKP+NI L + N ++K+ DFGLA ++ F + +F T
Sbjct: 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT------- 180
Query: 195 YRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
PE Y P D+WSIG I +L+G F LG
Sbjct: 181 ---PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF---------------LGDTK 222
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
ET+A N A Y E + F N LA ++RL+ DPK R T +++L
Sbjct: 223 QETLA---NVSAVNYEFED---------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 312 ADPYFK 317
P+ K
Sbjct: 271 QHPWIK 276
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 18/250 (7%)
Query: 18 EYGDANRYKILEVIGKGSYG---VVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVK 74
E D +++++L+V+G+GS+G +V + + A+K + + D +R E
Sbjct: 19 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD 78
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
+L + HP IV++ K +Y++ + + DL + T E +F+L
Sbjct: 79 ILVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 133
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
++ AL ++H+ + +RDLKP+NIL + +K+ DFGL++ + + T
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTV 190
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDL-LGTP-- 250
Y APE+ +T + D WS G + E+LTG F GK + +I LG P
Sbjct: 191 EYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF 248
Query: 251 -SPETIAVVR 259
SPE +++R
Sbjct: 249 LSPEAQSLLR 258
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 121/250 (48%), Gaps = 18/250 (7%)
Query: 18 EYGDANRYKILEVIGKGSYG---VVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVK 74
E D +++++L+V+G+GS+G +V + + A+K + + D +R E
Sbjct: 20 EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERD 79
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
+L + HP IV++ K +Y++ + + DL + T E +F+L
Sbjct: 80 ILVEVNHPFIVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA 134
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
++ AL ++H+ + +RDLKP+NIL + +K+ DFGL++ + + T
Sbjct: 135 ELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAY---SFCGTV 191
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDL-LGTP-- 250
Y APE+ +T + D WS G + E+LTG F GK + +I LG P
Sbjct: 192 EYMAPEVVNR--RGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF 249
Query: 251 -SPETIAVVR 259
SPE +++R
Sbjct: 250 LSPEAQSLLR 259
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 18/239 (7%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y E IG+G+ G V A+D TG++VAI++++ + I+ E+ ++R ++P+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
IV L +++VV E + + + + L+AL+++H
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGL-ARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
+ V HRD+K NIL + +K+ DFG A++ TP + V T ++ APE+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI----TPEQSKRSXMVGTPYWMAPEVVT 189
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTP---SPETIAVV 258
Y P +DIWS+G + E++ G+P + ++ + L LI GTP +PE ++ +
Sbjct: 190 R--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNPEKLSAI 245
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLR 80
++RY++ E++G G V A D VA+K + D+ S +R RE + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 81 HPDIVEI---KRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
HP IV + P Y+V E ++ L ++ +T + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLP----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV-ATRWY 195
+AL + H + HRD+KP NIL +A +KV DFG+AR A +D+ +V T V T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIAR-AIADSGNSVXQTAAVIGTAQY 185
Query: 196 RAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+PE G + D++S+GC+ EVLTG+P F G S V
Sbjct: 186 LSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 18/239 (7%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y E IG+G+ G V A+D TG++VAI++++ + I+ E+ ++R ++P+
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 78
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
IV L +++VV E + + + + L+AL+++H
Sbjct: 79 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 133
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGL-ARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
+ V HRD+K NIL + +K+ DFG A++ TP + V T ++ APE+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI----TPEQSKRSTMVGTPYWMAPEVVT 189
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTP---SPETIAVV 258
Y P +DIWS+G + E++ G+P + ++ + L LI GTP +PE ++ +
Sbjct: 190 R--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNPEKLSAI 245
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 134/307 (43%), Gaps = 46/307 (14%)
Query: 11 KDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRIL 70
KD D +Y Y++ E IG G + V A TGE VAIK I D SD RI
Sbjct: 3 KDYDELLKY-----YELHETIGTGGFAKVKLACHILTGEMVAIK-IMDKNTLGSDLPRIK 56
Query: 71 REVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQ 129
E++ L+ LRH I ++ ++ +K I++V E +L I + D L+ E +
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANK-----IFMVLEYCPGGELFDYIISQDRLSEEETR 111
Query: 130 FFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDY 189
Q++ A+ Y+H+ HRDLKP+N+L + KLK+ DFGL + +
Sbjct: 112 VVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHL--QTC 169
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
+ Y APEL S D+WS+G + ++ G F +V+
Sbjct: 170 CGSLAYAAPELIQG-KSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM------------ 216
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
Y MR K VP + + P ++ LLQ+++ DPK R + +
Sbjct: 217 --------------ALYKKIMRGKYDVPKW-----LSPSSILLLQQMLQVDPKKRISMKN 257
Query: 310 ALADPYF 316
L P+
Sbjct: 258 LLNHPWI 264
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 120/239 (50%), Gaps = 18/239 (7%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y E IG+G+ G V A+D TG++VAI++++ + I+ E+ ++R ++P+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 79
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
IV L +++VV E + + + + L+AL+++H
Sbjct: 80 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGL-ARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
+ V HRD+K NIL + +K+ DFG A++ TP + V T ++ APE+
Sbjct: 135 SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQI----TPEQSKRSXMVGTPYWMAPEVVT 190
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTP---SPETIAVV 258
Y P +DIWS+G + E++ G+P + ++ + L LI GTP +PE ++ +
Sbjct: 191 R--KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNPEKLSAI 246
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 25 YKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHD--VFEHISDAIRILREVKLLRLL 79
+++L V+GKG YG V +TG+ A+K + + + D E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQMLRA 138
+HP IV++ K +Y++ E L +L ++ + F+L ++ A
Sbjct: 79 KHPFIVDLIYAFQTGGK-----LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
L ++H + +RDLKP+NI+ N +K+ DFGL + + D +T + T Y AP
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT---HTFCGTIEYMAP 190
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
E+ S + A+D WS+G + ++LTG P F G++ +D I
Sbjct: 191 EIL--MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 110/225 (48%), Gaps = 16/225 (7%)
Query: 25 YKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHD--VFEHISDAIRILREVKLLRLL 79
+++L V+GKG YG V +TG+ A+K + + + D E +L +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQMLRA 138
+HP IV++ K +Y++ E L +L ++ + F+L ++ A
Sbjct: 79 KHPFIVDLIYAFQTGGK-----LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
L ++H + +RDLKP+NI+ N +K+ DFGL + + D +T + T Y AP
Sbjct: 134 LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVT---HXFCGTIEYMAP 190
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
E+ S + A+D WS+G + ++LTG P F G++ +D I
Sbjct: 191 EIL--MRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKI 233
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 106/208 (50%), Gaps = 14/208 (6%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAI-RILREVKLLRLLRH 81
Y + + +G G++G V TG KVA+K ++ D + +I RE++ L+L RH
Sbjct: 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRH 70
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALK 140
P I+++ +++ P+ D ++V E + +L I + + + Q+L A+
Sbjct: 71 PHIIKLYQVISTPT-----DFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVD 125
Query: 141 YMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE- 199
Y H V HRDLKP+N+L +A+ K+ DFGL+ + SD F + Y APE
Sbjct: 126 YCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNM-MSDGE---FLRTSCGSPNYAAPEV 181
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
+ G ++ P +DIWS G I +L G
Sbjct: 182 ISGRLYA--GPEVDIWSCGVILYALLCG 207
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLR 80
++RY++ E++G G V A D VA+K + D+ S +R RE + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 81 HPDIVEI---KRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
HP IV + P Y+V E ++ L ++ +T + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLP----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV-ATRWY 195
+AL + H + HRD+KP NI+ +A +KV DFG+AR A +D+ +V T V T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQY 185
Query: 196 RAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+PE G + D++S+GC+ EVLTG+P F G S V
Sbjct: 186 LSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 137/314 (43%), Gaps = 59/314 (18%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR------ILREVKLL 76
+ Y++ E +G G + +V TG++ A K I +S + R I REV +L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIEREVNIL 62
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
R +RHP+I+ + I + D+ ++ EL+ +L + + LT + FL Q+
Sbjct: 63 REIRHPNIITLHDIFENKT-----DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 136 LRALKYMHTANVYHRDLKPKNIL---ANA-NCKLKVCDFGLA-RVAFSDTPMTVFWTDYV 190
L + Y+H+ + H DLKP+NI+ N N ++K+ DFG+A ++ + +F T
Sbjct: 118 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT--- 174
Query: 191 ATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLL 247
PE Y P D+WSIG I +L+G F G++ L
Sbjct: 175 -------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT------ 221
Query: 248 GTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTA 307
I+ V + +Y F N LA ++RL+ DPK R T
Sbjct: 222 ------NISAVNYDFDEEY---------------FSNTSELAKDFIRRLLVKDPKRRMTI 260
Query: 308 EEALADPYFKGLAK 321
++L + K + +
Sbjct: 261 AQSLEHSWIKAIRR 274
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLR 80
++RY++ E++G G V A D VA+K + D+ S +R RE + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 81 HPDIVEI---KRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
HP IV + P Y+V E ++ L ++ +T + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLP----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV-ATRWY 195
+AL + H + HRD+KP NI+ +A +KV DFG+AR A +D+ +V T V T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQY 185
Query: 196 RAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+PE G + D++S+GC+ EVLTG+P F G S V
Sbjct: 186 LSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 15/221 (6%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLR 80
++RY++ E++G G V A D VA+K + D+ S +R RE + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 81 HPDIVEI---KRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
HP IV + P Y+V E ++ L ++ +T + +
Sbjct: 71 HPAIVAVYDTGEAETPAGPLP----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV-ATRWY 195
+AL + H + HRD+KP NI+ +A +KV DFG+AR A +D+ +V T V T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQY 185
Query: 196 RAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKS 235
+PE G + D++S+GC+ EVLTG+P F G S
Sbjct: 186 LSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDS 223
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLR 80
++RY++ E++G G V A D VA+K + D+ S +R RE + L
Sbjct: 11 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 70
Query: 81 HPDIVEI---KRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
HP IV + P Y+V E ++ L ++ +T + +
Sbjct: 71 HPAIVAVYATGEAETPAGPLP----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 126
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV-ATRWY 195
+AL + H + HRD+KP NI+ +A +KV DFG+AR A +D+ +V T V T Y
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQY 185
Query: 196 RAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+PE G + D++S+GC+ EVLTG+P F G S V
Sbjct: 186 LSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 225
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 119/251 (47%), Gaps = 18/251 (7%)
Query: 17 TEYGDANRYKILEVIGKGSYG---VVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREV 73
+E D + +++L+V+G+GS+G +V +G A+K + + D +R E
Sbjct: 22 SEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER 81
Query: 74 KLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFL 132
+L + HP +V++ K +Y++ + + DL + T E +F+L
Sbjct: 82 DILADVNHPFVVKLHYAFQTEGK-----LYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL 136
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
++ L ++H+ + +RDLKP+NIL + +K+ DFGL++ A + T
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAY---SFCGT 193
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDL-LGTP- 250
Y APE+ ++ + D WS G + E+LTG F GK + LI LG P
Sbjct: 194 VEYMAPEVVNR--QGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ 251
Query: 251 --SPETIAVVR 259
S E +++R
Sbjct: 252 FLSTEAQSLLR 262
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 152/344 (44%), Gaps = 60/344 (17%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL-RHPDIVEI 87
+V+G G+ G + VA+K+I +D REV+LLR HP+++
Sbjct: 30 DVLGHGAEGTIVYR-GMFDNRDVAVKRILPECFSFAD-----REVQLLRESDEHPNVI-- 81
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
R R+F+ Y+ EL + L + ++ D L E L Q L ++H+
Sbjct: 82 -RYFCTEKDRQFQ--YIAIELCAATLQEYVEQKDFAHLGLEPITL-LQQTTSGLAHLHSL 137
Query: 146 NVYHRDLKPKNIL---ANANCKLK--VCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
N+ HRDLKP NIL NA+ K+K + DFGL + + T + APE+
Sbjct: 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEM 197
Query: 201 CGSFFSKY-TPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ T +DI+S GC+F V++ GKS+ Q ++ LLG S + + +
Sbjct: 198 LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANI---LLGACSLDCLHPEK 254
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
+E D +A L++++IA DP+ RP+A+ L P+F L
Sbjct: 255 HE------------------------DVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL 290
Query: 320 AK-----------IEREPSCQPISKLEFEFERRRVTKDDIRELI 352
K IE+E PI K + E R V K D RE I
Sbjct: 291 EKQLQFFQDVSDRIEKESLDGPIVK-QLERGGRAVVKMDWRENI 333
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 117/238 (49%), Gaps = 16/238 (6%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y E IG+G+ G V A+D TG++VAI++++ + I+ E+ ++R ++P+
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN--LQQQPKKELIINEILVMRENKNPN 79
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
IV L +++VV E + + + + L+AL+++H
Sbjct: 80 IVNYLDSYLVGD-----ELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH 134
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ V HR++K NIL + +K+ DFG TP + V T ++ APE+
Sbjct: 135 SNQVIHRNIKSDNILLGMDGSVKLTDFGFCA---QITPEQSKRSTMVGTPYWMAPEVVTR 191
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTP---SPETIAVV 258
Y P +DIWS+G + E++ G+P + ++ + L LI GTP +PE ++ +
Sbjct: 192 --KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIAT-NGTPELQNPEKLSAI 246
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 107/223 (47%), Gaps = 15/223 (6%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLR 80
++RY++ E++G G V A D VA+K + D+ S +R RE + L
Sbjct: 28 SDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN 87
Query: 81 HPDIVEI---KRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
HP IV + P Y+V E ++ L ++ +T + +
Sbjct: 88 HPAIVAVYDTGEAETPAGPLP----YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADAC 143
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV-ATRWY 195
+AL + H + HRD+KP NI+ +A +KV DFG+AR A +D+ +V T V T Y
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIAR-AIADSGNSVTQTAAVIGTAQY 202
Query: 196 RAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+PE G + D++S+GC+ EVLTG+P F G S V
Sbjct: 203 LSPEQARGDSVDARS---DVYSLGCVLYEVLTGEPPFTGDSPV 242
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 20/212 (9%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
D++RY++++ IG G++GV D + E VA+K I + E I + ++ RE+ R LR
Sbjct: 16 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVK--REIINHRSLR 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+IV K ++L P+ + +V E +L + I + + +FF Q++ +
Sbjct: 73 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 127
Query: 140 KYMHTANVYHRDLKPKNILANAN--CKLKVCDFGLARVA-FSDTPMTVFWTDYVATRWYR 196
Y H V HRDLK +N L + + +LK+CDFG ++ + P + V T Y
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYI 182
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 183 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 212
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 107/212 (50%), Gaps = 20/212 (9%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
D++RY++++ IG G++GV D + E VA+K I + E I A + RE+ R LR
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKI--AANVKREIINHRSLR 73
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+IV K ++L P+ + +V E +L + I + + +FF Q++ +
Sbjct: 74 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 140 KYMHTANVYHRDLKPKNILANAN--CKLKVCDFGLARVA-FSDTPMTVFWTDYVATRWYR 196
Y H V HRDLK +N L + + +LK+CDFG ++ + P + V T Y
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYI 183
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 184 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 134/310 (43%), Gaps = 54/310 (17%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH--------DVFEHISDAIRILREVK 74
+Y +VIG+G VV + TG + A+K + + E + +A R RE
Sbjct: 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR--RETH 151
Query: 75 LLR-LLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFL 132
+LR + HP I I L S +++VF+LM + +L + L+ + + +
Sbjct: 152 ILRQVAGHPHI-----ITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIM 206
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+L A+ ++H N+ HRDLKP+NIL + N ++++ DFG + + + T
Sbjct: 207 RSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL----RELCGT 262
Query: 193 RWYRAPELCGSFFSKYTPA----IDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITD-LL 247
Y APE+ + P +D+W+ G I +L G P F + + L +I +
Sbjct: 263 PGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQY 322
Query: 248 GTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTA 307
SPE + + L+ RL+ DP+ R TA
Sbjct: 323 QFSSPE----------------------------WDDRSSTVKDLISRLLQVDPEARLTA 354
Query: 308 EEALADPYFK 317
E+AL P+F+
Sbjct: 355 EQALQHPFFE 364
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 107/212 (50%), Gaps = 20/212 (9%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
D++RY++++ IG G++GV D + E VA+K I + E I + ++ RE+ R LR
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVK--REIINHRSLR 73
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+IV K ++L P+ + +V E +L + I + + +FF Q++ +
Sbjct: 74 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 140 KYMHTANVYHRDLKPKNILANAN--CKLKVCDFGLARVA-FSDTPMTVFWTDYVATRWYR 196
Y H V HRDLK +N L + + +LK+C FG ++ + P D V T Y
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQP-----KDTVGTPAYI 183
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 184 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREV 73
F + DA+ KI +VIG G +G VC+ G++ I + +D R L E
Sbjct: 22 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 81
Query: 74 KLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDD-LTREHHQFF 131
++ HP+I+ ++ ++ + K + ++ E ME+ L ++ ND T
Sbjct: 82 SIMGQFDHPNIIHLEGVVT-----KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 136
Query: 132 LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT--DY 189
L + +KY+ + HRDL +NIL N+N KV DFG++RV D P + T
Sbjct: 137 LRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAAYTTRGGK 195
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ RW APE + K+T A D+WS G + EV++
Sbjct: 196 IPIRW-TAPEAIA--YRKFTSASDVWSYGIVMWEVMS 229
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 152/344 (44%), Gaps = 60/344 (17%)
Query: 24 RYKILEVIGKGSYGVVCAAID-THTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL--R 80
RY+I+ +G+G++G V +D G +VA+K I +V E +A R+ E+ +L + +
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNV-EKYKEAARL--EINVLEKINEK 90
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQF--FLYQMLRA 138
PD + M + + FEL+ +K N+ L HQ +Q+ +A
Sbjct: 91 DPDNKNLCVQMFDWFDYH-GHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQA 149
Query: 139 LKYMHTANVYHRDLKPKNIL-ANANCKL------------------KVCDFGLARVAFSD 179
+K++H + H DLKP+NIL N++ +L +V DFG A F
Sbjct: 150 VKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSA--TFDH 207
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQ 239
+ V+TR YRAPE+ ++ D+WSIGCI E G LF
Sbjct: 208 EHHSTI----VSTRHYRAPEVILEL--GWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREH 261
Query: 240 LDLITDLLGTPSPETIAVVRNEKARKYLTEMR----KKPPVPLFQKFPNVDPLA------ 289
L ++ +LG P P + +R + +KY R + + + N PL
Sbjct: 262 LAMMERILG-PIPSRM--IRKTRKQKYFYRGRLDWDENTSAGRYVR-ENCKPLRRYLTSE 317
Query: 290 -------LRLLQRLIAFDPKDRPTAEEALADPYFKGLAKIEREP 326
L++ ++ ++P R T EAL P+F A++ EP
Sbjct: 318 AEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFF---ARLRAEP 358
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/311 (26%), Positives = 134/311 (43%), Gaps = 59/311 (18%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR------ILREVKLL 76
+ Y++ E +G G + +V TG++ A K I +S + R I REV +L
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLSSSRRGVSREEIEREVNIL 69
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
R +RHP+I+ + I + D+ ++ EL+ +L + + LT + FL Q+
Sbjct: 70 REIRHPNIITLHDIFENKT-----DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 136 LRALKYMHTANVYHRDLKPKNIL---ANA-NCKLKVCDFGLA-RVAFSDTPMTVFWTDYV 190
L + Y+H+ + H DLKP+NI+ N N ++K+ DFG+A ++ + +F T
Sbjct: 125 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT--- 181
Query: 191 ATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLL 247
PE Y P D+WSIG I +L+G F G++ L
Sbjct: 182 -------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT------ 228
Query: 248 GTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTA 307
I+ V + +Y F N LA ++RL+ DPK R
Sbjct: 229 ------NISAVNYDFDEEY---------------FSNTSELAKDFIRRLLVKDPKRRMXI 267
Query: 308 EEALADPYFKG 318
++L + K
Sbjct: 268 AQSLEHSWIKA 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 45/305 (14%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPD 83
Y +V+G G++ V A D T + VAIK I + E ++ E+ +L ++HP+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHKIKHPN 77
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
IV + I +Y++ +L+ +L I T ++Q+L A+KY+
Sbjct: 78 IVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 143 HTANVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
H + HRDLKP+N+L + + K+ + DFGL+++ + P +V T T Y APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPE 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ Y+ A+D WSIG I +L G P F
Sbjct: 189 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPF---------------------------Y 219
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
+E K ++ K + ++ A ++ L+ DP+ R T E+AL P+ G
Sbjct: 220 DENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
Query: 320 AKIER 324
+++
Sbjct: 280 TALDK 284
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 107/212 (50%), Gaps = 20/212 (9%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
D++RY ++ IG G++GV D T E VA+K I + I + ++ RE+ R LR
Sbjct: 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI-ERGAAIDENVQ--REIINHRSLR 74
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+IV K ++L P+ + ++ E +L++ I + + +FF Q+L +
Sbjct: 75 HPNIVRFKEVILTPTH-----LAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129
Query: 140 KYMHTANVYHRDLKPKNILANAN--CKLKVCDFGLARVA-FSDTPMTVFWTDYVATRWYR 196
Y H+ + HRDLK +N L + + +LK+CDFG ++ + P + V T Y
Sbjct: 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST-----VGTPAYI 184
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y I D+WS G +L G
Sbjct: 185 APEVL--LRQEYDGKIADVWSCGVTLYVMLVG 214
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 131/302 (43%), Gaps = 50/302 (16%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
++ Y + E IG GSY + T + A+K I S+ I IL LR +H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL-----LRYGQH 80
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRAL 139
P+I+ +K + + K +Y+V ELM L ++++ RE F L+ + + +
Sbjct: 81 PNIITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQKFFSEREA-SFVLHTIGKTV 134
Query: 140 KYMHTANVYHRDLKPKNIL-----ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+Y+H+ V HRDLKP NIL N C L++CDFG A+ ++ + + Y A
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGL-LMTPCYTAN-- 190
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKSVVHQLDLITDLLGTPSPE 253
+ APE+ Y DIWS+G + +L G P G S +PE
Sbjct: 191 FVAPEVLKR--QGYDEGCDIWSLGILLYTMLAGYTPFANGPS--------------DTPE 234
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALAD 313
I LT + + V A L+ +++ DP R TA++ L
Sbjct: 235 EI-----------LTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
Query: 314 PY 315
P+
Sbjct: 284 PW 285
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 106/224 (47%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEK---VAIKKIHDVFEHISDAIRILRE 72
F + DA+ KI VIG G +G VC+ G++ VAIK + + L E
Sbjct: 36 FAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTE-KQRRDFLCE 94
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP++V ++ ++ K + +V E ME+ A D R+H F
Sbjct: 95 ASIMGQFDHPNVVHLEGVVT-----RGKPVMIVIEFMENG------ALDAFLRKHDGQFT 143
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR ++Y+ HRDL +NIL N+N KV DFGL+RV D P V
Sbjct: 144 VIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRV-IEDDPEAV 202
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW APE + K+T A D+WS G + EV++
Sbjct: 203 YTTTGGKIPVRW-TAPEAIQ--YRKFTSASDVWSYGIVMWEVMS 243
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 131/302 (43%), Gaps = 50/302 (16%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
++ Y + E IG GSY + T + A+K I S+ I IL LR +H
Sbjct: 26 SDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEIL-----LRYGQH 80
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRAL 139
P+I+ +K + + K +Y+V ELM L ++++ RE F L+ + + +
Sbjct: 81 PNIITLKDVY-----DDGKHVYLVTELMRGGELLDKILRQKFFSEREA-SFVLHTIGKTV 134
Query: 140 KYMHTANVYHRDLKPKNIL-----ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+Y+H+ V HRDLKP NIL N C L++CDFG A+ ++ + + Y A
Sbjct: 135 EYLHSQGVVHRDLKPSNILYVDESGNPEC-LRICDFGFAKQLRAENGL-LMTPCYTAN-- 190
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKSVVHQLDLITDLLGTPSPE 253
+ APE+ Y DIWS+G + +L G P G S +PE
Sbjct: 191 FVAPEVLKR--QGYDEGCDIWSLGILLYTMLAGYTPFANGPS--------------DTPE 234
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALAD 313
I LT + + V A L+ +++ DP R TA++ L
Sbjct: 235 EI-----------LTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQH 283
Query: 314 PY 315
P+
Sbjct: 284 PW 285
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 100/209 (47%), Gaps = 16/209 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +LE +G+GSYG V AI TG+ VAIK++ SD I++E+ +++ P +
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE----SDLQEIIKEISIMQQCDSPHV 86
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKA-NDDLTREHHQFFLYQMLRALKYM 142
V+ S + D+++V E + + +I+ N LT + L L+ L+Y+
Sbjct: 87 VKYYG-----SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYL 141
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H HRD+K NIL N K+ DFG VA T + T ++ APE+
Sbjct: 142 HFMRKIHRDIKAGNILLNTEGHAKLADFG---VAGQLTDXMAKRNXVIGTPFWMAPEVIQ 198
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y DIWS+G E+ GKP +
Sbjct: 199 EI--GYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 15/208 (7%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLY--QMLRA 138
H +IV+ K + +R K ++ L L ++A+ + +H + Y Q+ +
Sbjct: 73 HDNIVKYKGVCYSAGRRNLK--LIMEYLPYGSLRDYLQAHAERI-DHIKLLQYTSQICKG 129
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
++Y+ T HRDL +NIL ++K+ DFGL +V D + ++ AP
Sbjct: 130 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAP 189
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
E SK++ A D+WS G + E+ T
Sbjct: 190 ESLTE--SKFSVASDVWSFGVVLYELFT 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 45/305 (14%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPD 83
Y +V+G G++ V A D T + VAIK I + E ++ E+ +L ++HP+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHKIKHPN 77
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
IV + I +Y++ +L+ +L I T ++Q+L A+KY+
Sbjct: 78 IVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 143 HTANVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
H + HRDLKP+N+L + + K+ + DFGL+++ + P +V T T Y APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPE 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ Y+ A+D WSIG I +L G P F
Sbjct: 189 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPF---------------------------Y 219
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
+E K ++ K + ++ A ++ L+ DP+ R T E+AL P+ G
Sbjct: 220 DENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
Query: 320 AKIER 324
+++
Sbjct: 280 TALDK 284
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 135/305 (44%), Gaps = 45/305 (14%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPD 83
Y +V+G G++ V A D T + VAIK I + E ++ E+ +L ++HP+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSME--NEIAVLHKIKHPN 77
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
IV + I +Y++ +L+ +L I T ++Q+L A+KY+
Sbjct: 78 IVALDDIYESGGH-----LYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 143 HTANVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
H + HRDLKP+N+L + + K+ + DFGL+++ + P +V T T Y APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPE 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ Y+ A+D WSIG I +L G P F
Sbjct: 189 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPF---------------------------Y 219
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
+E K ++ K + ++ A ++ L+ DP+ R T E+AL P+ G
Sbjct: 220 DENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
Query: 320 AKIER 324
+++
Sbjct: 280 TALDK 284
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 107/212 (50%), Gaps = 20/212 (9%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
D++RY++++ IG G++GV D + E VA+K I + E I + ++ RE+ R LR
Sbjct: 17 DSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYI-ERGEKIDENVK--REIINHRSLR 73
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+IV K ++L P+ + +V E +L + I + + +FF Q++ +
Sbjct: 74 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 140 KYMHTANVYHRDLKPKNILANAN--CKLKVCDFGLARVA-FSDTPMTVFWTDYVATRWYR 196
Y H V HRDLK +N L + + +LK+C FG ++ + P + V T Y
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST-----VGTPAYI 183
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 184 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREV 73
F + DA+ KI +VIG G +G VC+ G++ I + +D R L E
Sbjct: 7 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 66
Query: 74 KLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDD-LTREHHQFF 131
++ HP+I+ ++ ++ + K + ++ E ME+ L ++ ND T
Sbjct: 67 SIMGQFDHPNIIHLEGVVT-----KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 121
Query: 132 LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT--DY 189
L + +KY+ + HRDL +NIL N+N KV DFG++RV D P + T
Sbjct: 122 LRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAAYTTRGGK 180
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ RW APE + K+T A D+WS G + EV++
Sbjct: 181 IPIRW-TAPEAIA--YRKFTSASDVWSYGIVMWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREV 73
F + DA+ KI +VIG G +G VC+ G++ I + +D R L E
Sbjct: 1 FAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 60
Query: 74 KLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDD-LTREHHQFF 131
++ HP+I+ ++ ++ + K + ++ E ME+ L ++ ND T
Sbjct: 61 SIMGQFDHPNIIHLEGVVT-----KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGM 115
Query: 132 LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT--DY 189
L + +KY+ + HRDL +NIL N+N KV DFG++RV D P + T
Sbjct: 116 LRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRV-LEDDPEAAYTTRGGK 174
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ RW APE + K+T A D+WS G + EV++
Sbjct: 175 IPIRW-TAPEAIA--YRKFTSASDVWSYGIVMWEVMS 208
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 30/212 (14%)
Query: 29 EVIGKGSYG-VVCAAIDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+VIG G +G V + T +G+K VAIK + + + L E ++ H +I
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTE-KQRVDFLGEAGIMGQFSHHNI 108
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF----LYQMLRA-- 138
+ ++ ++ ++K + ++ E ME+ A D RE F L MLR
Sbjct: 109 IRLEGVI-----SKYKPMMIITEYMENG------ALDKFLREKDGEFSVLQLVGMLRGIA 157
Query: 139 --LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDY--VATRW 194
+KY+ N HRDL +NIL N+N KV DFGL+RV D P + T + RW
Sbjct: 158 AGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRV-LEDDPEATYTTSGGKIPIRW 216
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE + K+T A D+WS G + EV+T
Sbjct: 217 -TAPEAIS--YRKFTSASDVWSFGIVMWEVMT 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 136/316 (43%), Gaps = 60/316 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHP 82
RY +GKG + D T E A K + + ++ E+ + + L +P
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 86
Query: 83 DIVEIKRIMLPPSKREFKD---IYVVFELMES----DLHQVIKANDDLTREHHQFFLYQM 135
+V F+D +YVV E+ +LH+ KA +T ++F+ Q
Sbjct: 87 HVVGFHGF--------FEDDDFVYVVLEICRRRSLLELHKRRKA---VTEPEARYFMRQT 135
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
++ ++Y+H V HRDLK N+ N + +K+ DFGLA ++ F D T
Sbjct: 136 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK----DLCGTPN 191
Query: 195 YRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPE 253
Y APE LC ++ +DIWS+GCI +L GKP F +
Sbjct: 192 YIAPEVLCKK---GHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY------------- 235
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALAD 313
I + +NE + VP +++P+A L++R++ DP RP+ E L D
Sbjct: 236 -IRIKKNEYS------------VPR-----HINPVASALIRRMLHADPTLRPSVAELLTD 277
Query: 314 PYF-KGLAKIEREPSC 328
+F G A + SC
Sbjct: 278 EFFTSGYAPMRLPTSC 293
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 103/210 (49%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y + + ++ ++ TR F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTR----FYTAEIVSALEY 147
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANSFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ + D+W++GCI +++ G P F
Sbjct: 207 TE--KSASKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 106/212 (50%), Gaps = 20/212 (9%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
D++RY++++ IG G++GV D E VA+K I + E I + ++ RE+ R LR
Sbjct: 17 DSDRYELVKDIGAGNFGVARLMRDKQANELVAVKYI-ERGEKIDENVK--REIINHRSLR 73
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP+IV K ++L P+ + +V E +L + I + + +FF Q++ +
Sbjct: 74 HPNIVRFKEVILTPTH-----LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGV 128
Query: 140 KYMHTANVYHRDLKPKNILANAN--CKLKVCDFGLARVA-FSDTPMTVFWTDYVATRWYR 196
Y H V HRDLK +N L + + +LK+ DFG ++ + P + V T Y
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSA-----VGTPAYI 183
Query: 197 APELCGSFFSKYTPAI-DIWSIGCIFAEVLTG 227
APE+ +Y + D+WS G +L G
Sbjct: 184 APEVL--LKKEYDGKVADVWSCGVTLYVMLVG 213
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 140/309 (45%), Gaps = 32/309 (10%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL-RLLRHP 82
YK+ E++G+G+Y V A+ G++ A+K I H R+ REV+ L + +
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRS--RVFREVETLYQCQGNK 71
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
+I+E+ ++ Y+VFE L + I+ + + AL +
Sbjct: 72 NILELIEFFEDDTR-----FYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDF 126
Query: 142 MHTANVYHRDLKPKNILANANCK---LKVCDFGLA---RVAFSDTPMTV-FWTDYVATRW 194
+HT + HRDLKP+NIL + K +K+CDF L ++ S TP+T T +
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAE 186
Query: 195 YRAPELCGSFFSK---YTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
Y APE+ F + Y D+WS+G + +L+G P F G G
Sbjct: 187 YMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD--------CGWDR 238
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
E V +N K + + E + + P + + ++ A L+ +L+ D K R +A + L
Sbjct: 239 GEVCRVCQN-KLFESIQEGKYEFPD---KDWAHISSEAKDLISKLLVRDAKQRLSAAQVL 294
Query: 312 ADPYFKGLA 320
P+ +G A
Sbjct: 295 QHPWVQGQA 303
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 107/209 (51%), Gaps = 17/209 (8%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQFFLY--QMLR 137
H +IV+ K + +R K ++ E + L + ++ + + +H + Y Q+ +
Sbjct: 73 HDNIVKYKGVCYSAGRRNLK---LIMEFLPYGSLREYLQKHKERI-DHIKLLQYTSQICK 128
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
++Y+ T HRDL +NIL ++K+ DFGL +V D + ++ A
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA 188
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
PE SK++ A D+WS G + E+ T
Sbjct: 189 PESLTE--SKFSVASDVWSFGVVLYELFT 215
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 144/323 (44%), Gaps = 55/323 (17%)
Query: 7 KKELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISD- 65
+ + D D E + Y++ EVIGKG + VV I+ TG++ A+K I DV + S
Sbjct: 14 RGSMADDDVLFE----DVYELCEVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSP 68
Query: 66 ---AIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDL-HQVIKAN 120
+ RE + +L+HP IVE+ +Y+VFE M+ +DL +++K
Sbjct: 69 GLSTEDLKREASICHMLKHPHIVELLETYSSDGM-----LYMVFEFMDGADLCFEIVKRA 123
Query: 121 DD---LTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLAR 174
D + ++ Q+L AL+Y H N+ HRD+KP +L + + +K+ FG+A
Sbjct: 124 DAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA- 182
Query: 175 VAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 234
+ ++ + V T + APE+ Y +D+W G I +L+G F
Sbjct: 183 IQLGESGLVA--GGRVGTPHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPF--- 235
Query: 235 SVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQ 294
GT +++ KY R ++ ++ A L++
Sbjct: 236 ------------YGTKERLFEGIIKG----KYKMNPR---------QWSHISESAKDLVR 270
Query: 295 RLIAFDPKDRPTAEEALADPYFK 317
R++ DP +R T EAL P+ K
Sbjct: 271 RMLMLDPAERITVYEALNHPWLK 293
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 138/305 (45%), Gaps = 51/305 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISD----AIRILREVKLLRLLR 80
Y++ EVIGKG + VV I+ TG++ A+K I DV + S + RE + +L+
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELME-SDL-HQVIKANDD---LTREHHQFFLYQM 135
HP IVE+ +Y+VFE M+ +DL +++K D + ++ Q+
Sbjct: 85 HPHIVELLETYSSDGM-----LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 136 LRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
L AL+Y H N+ HRD+KP +L + + +K+ FG+A + ++ + V T
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA-IQLGESGLVA--GGRVGT 196
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
+ APE+ Y +D+W G I +L+G F GT
Sbjct: 197 PHFMAPEVVKR--EPYGKPVDVWGCGVILFILLSGCLPF---------------YGTKER 239
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALA 312
+++ KY R ++ ++ A L++R++ DP +R T EAL
Sbjct: 240 LFEGIIKG----KYKMNPR---------QWSHISESAKDLVRRMLMLDPAERITVYEALN 286
Query: 313 DPYFK 317
P+ K
Sbjct: 287 HPWLK 291
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 45/305 (14%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPD 83
Y +V+G G++ V A D T + VAIK I E ++ E+ +L ++HP+
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSME--NEIAVLHKIKHPN 77
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
IV + I +Y++ +L+ +L I T ++Q+L A+KY+
Sbjct: 78 IVALDDIY-----ESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 143 HTANVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
H + HRDLKP+N+L + + K+ + DFGL+++ + P +V T T Y APE
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVLST-ACGTPGYVAPE 188
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ Y+ A+D WSIG I +L G P F
Sbjct: 189 VLAQ--KPYSKAVDCWSIGVIAYILLCGYPPF---------------------------Y 219
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
+E K ++ K + ++ A ++ L+ DP+ R T E+AL P+ G
Sbjct: 220 DENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
Query: 320 AKIER 324
+++
Sbjct: 280 TALDK 284
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 136/318 (42%), Gaps = 64/318 (20%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHP 82
RY +GKG + D T E A K + + ++ E+ + + L +P
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 83 DIVEIKRIMLPPSKREFKD---IYVVFELMES----DLHQVIKANDDLTREHHQFFLYQM 135
+V F+D +YVV E+ +LH+ KA +T ++F+ Q
Sbjct: 103 HVVGFHGF--------FEDDDFVYVVLEICRRRSLLELHKRRKA---VTEPEARYFMRQT 151
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
++ ++Y+H V HRDLK N+ N + +K+ DFGLA ++ F D T
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKK----DLCGTPN 207
Query: 195 YRAPE-LC--GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
Y APE LC G F +DIWS+GCI +L GKP F +
Sbjct: 208 YIAPEVLCKKGHSFE-----VDIWSLGCILYTLLVGKPPFETSCLKETY----------- 251
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
I + +NE + VP +++P+A L++R++ DP RP+ E L
Sbjct: 252 ---IRIKKNEYS------------VPR-----HINPVASALIRRMLHADPTLRPSVAELL 291
Query: 312 ADPYF-KGLAKIEREPSC 328
D +F G A + SC
Sbjct: 292 TDEFFTSGYAPMRLPTSC 309
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 76
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 131
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 191
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 192 APESLTE--SKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 74
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 129
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 190 APESLTE--SKFSVASDVWSFGVVLYELFT 217
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 68
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 123
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 183
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 184 APESLTE--SKFSVASDVWSFGVVLYELFT 211
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 100
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 155
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 215
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 216 APESLTE--SKFSVASDVWSFGVVLYELFT 243
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 73
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 128
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 188
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 189 APESLTE--SKFSVASDVWSFGVVLYELFT 216
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 135/314 (42%), Gaps = 59/314 (18%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR------ILREVKLL 76
+ Y++ E +G G + +V TG++ A K I + + R I REV +L
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKK--RRLXSSRRGVSREEIEREVNIL 83
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
R +RHP+I+ + I + D+ ++ EL+ +L + + LT + FL Q+
Sbjct: 84 REIRHPNIITLHDIFENKT-----DVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 136 LRALKYMHTANVYHRDLKPKNIL---ANA-NCKLKVCDFGLA-RVAFSDTPMTVFWTDYV 190
L + Y+H+ + H DLKP+NI+ N N ++K+ DFG+A ++ + +F T
Sbjct: 139 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGT--- 195
Query: 191 ATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLL 247
PE Y P D+WSIG I +L+G F G++ L
Sbjct: 196 -------PEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLT------ 242
Query: 248 GTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTA 307
I+ V + +Y F N LA ++RL+ DPK R
Sbjct: 243 ------NISAVNYDFDEEY---------------FSNTSELAKDFIRRLLVKDPKRRMXI 281
Query: 308 EEALADPYFKGLAK 321
++L + K + +
Sbjct: 282 AQSLEHSWIKAIRR 295
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 72
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 127
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 188 APESLTE--SKFSVASDVWSFGVVLYELFT 215
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 69
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 124
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 185 APESLTE--SKFSVASDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 67
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 122
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 182
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 183 APESLTE--SKFSVASDVWSFGVVLYELFT 210
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 75
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 130
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 191 APESLTE--SKFSVASDVWSFGVVLYELFT 218
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 69
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 124
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 184
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 185 APESLTE--SKFSVASDVWSFGVVLYELFT 212
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 107/224 (47%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEK---VAIKKIHDVFEHISDAIRILRE 72
F + +A+ I VIG G +G VC+ G++ VAIK + + L E
Sbjct: 15 FAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTE-KQRRDFLGE 73
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF 131
++ HP+I+ ++ ++ + K + +V E ME+ L +K ND QF
Sbjct: 74 ASIMGQFDHPNIIHLEGVVT-----KSKPVMIVTEYMENGSLDTFLKKNDG------QFT 122
Query: 132 LYQ---MLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
+ Q MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 123 VIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 181
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW APE F K+T A D+WS G + EV++
Sbjct: 182 YTTRGGKIPIRW-TAPEAIA--FRKFTSASDVWSYGIVMWEVVS 222
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 87
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 142
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 203 APESLTE--SKFSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 69
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 124
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWY 184
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 185 APESLTE--SKFSVASDVWSFGVVLYELFT 212
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 87
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 142
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HRDL +NIL ++K+ DFGL +V D + ++
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY 202
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 203 APESLTE--SKFSVASDVWSFGVVLYELFT 230
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 92
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANSFVGTAQYVSPELL 207
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 208 TE--KSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E + + RE ++ L H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 68
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 124
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 125 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 183
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 184 TE--KSACKSSDLWALGCIIYQLVAGLPPF 211
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEK---VAIKKIHDVFEHISDAIRILRE 72
F + D + KI EVIG G +G VC G+K VAIK + + L E
Sbjct: 9 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTE-RQRREFLSE 67
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD-LHQVIKANDDLTREHHQFF 131
++ HP+I+ ++ ++ + ++ E ME+ L ++ ND QF
Sbjct: 68 ASIMGQFEHPNIIRLEGVVT-----NSMPVMILTEFMENGALDSFLRLNDG------QFT 116
Query: 132 LYQ---MLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV---AFSDTP 181
+ Q MLR ++Y+ + HRDL +NIL N+N KV DFGL+R SD
Sbjct: 117 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 182 MTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
T + RW APE F K+T A D WS G + EV++
Sbjct: 177 ETSSLGGKIPIRWT-APEAIA--FRKFTSASDAWSYGIVMWEVMS 218
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 106/225 (47%), Gaps = 29/225 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEK---VAIKKIHDVFEHISDAIRILRE 72
F + D + KI +VIG G +G VC+ G++ VAIK + + L E
Sbjct: 26 FAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE-KQRRDFLSE 84
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF 131
++ HP+++ ++ ++ + + ++ E ME+ L ++ ND QF
Sbjct: 85 ASIMGQFDHPNVIHLEGVVTKSTP-----VMIITEFMENGSLDSFLRQNDG------QFT 133
Query: 132 LYQ---MLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTP--- 181
+ Q MLR +KY+ N HRDL +NIL N+N KV DFGL+R DT
Sbjct: 134 VIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
Query: 182 MTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
T + RW APE + K+T A D+WS G + EV++
Sbjct: 194 YTSALGGKIPIRW-TAPEAIQ--YRKFTSASDVWSYGIVMWEVMS 235
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 69
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 125
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 126 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 184
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 185 TE--KSACKSSDLWALGCIIYQLVAGLPPF 212
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E + + RE ++ L H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 67
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 123
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 182
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 183 TE--KSACKSSDLWALGCIIYQLVAGLPPF 210
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 103/225 (45%), Gaps = 29/225 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEK---VAIKKIHDVFEHISDAIRILRE 72
F + D + KI EVIG G +G VC G+K VAIK + + L E
Sbjct: 7 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTE-RQRREFLSE 65
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD-LHQVIKANDDLTREHHQFF 131
++ HP+I+ ++ ++ + ++ E ME+ L ++ ND QF
Sbjct: 66 ASIMGQFEHPNIIRLEGVVT-----NSMPVMILTEFMENGALDSFLRLNDG------QFT 114
Query: 132 LYQ---MLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV---AFSDTP 181
+ Q MLR ++Y+ + HRDL +NIL N+N KV DFGL+R SD
Sbjct: 115 VIQLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 174
Query: 182 MTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
T + RW APE F K+T A D WS G + EV++
Sbjct: 175 YTSSLGGKIPIRW-TAPEAIA--FRKFTSASDAWSYGIVMWEVMS 216
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 66
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 122
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 123 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 181
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 182 TE--KSACKSSDLWALGCIIYQLVAGLPPF 209
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E + + RE ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 88
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANSFVGTAQYVSPELL 203
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 204 TE--KSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 92
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 148
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 207
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 208 TE--KSACKSSDLWALGCIIYQLVAGLPPF 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E + + RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E + + RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 207 TE--KSAXKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E + + RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 125/292 (42%), Gaps = 51/292 (17%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+GKG + D T E A K + + ++ E+ + R L H +V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 90 IMLPPSKREFKD---IYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
F+D ++VV EL L ++ K LT +++L Q++ +Y+H
Sbjct: 83 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 134
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLA-RVAFSDTPMTVFWTDYVATRWYRAPELCGSF 204
V HRDLK N+ N + ++K+ DFGLA +V + V T Y APE+
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL----CGTPNYIAPEVLSK- 189
Query: 205 FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKAR 264
++ +D+WSIGCI +L GKP F ET +
Sbjct: 190 -KGHSFEVDVWSIGCIMYTLLVGKPPF---------------------ETSCL-----KE 222
Query: 265 KYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
YL + + +P +++P+A L+Q+++ DP RPT E L D +F
Sbjct: 223 TYLRIKKNEYSIP-----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 269
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E + + RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 135/318 (42%), Gaps = 64/318 (20%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHP 82
RY +GKG + D T E A K + + ++ E+ + + L +P
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 83 DIVEIKRIMLPPSKREFKD---IYVVFELMES----DLHQVIKANDDLTREHHQFFLYQM 135
+V F+D +YVV E+ +LH+ KA +T ++F+ Q
Sbjct: 103 HVVGFHGF--------FEDDDFVYVVLEICRRRSLLELHKRRKA---VTEPEARYFMRQT 151
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLA-RVAFSDTPMTVFWTDYVATRW 194
++ ++Y+H V HRDLK N+ N + +K+ DFGLA ++ F T
Sbjct: 152 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL----CGTPN 207
Query: 195 YRAPE-LC--GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPS 251
Y APE LC G F +DIWS+GCI +L GKP F +
Sbjct: 208 YIAPEVLCKKGHSFE-----VDIWSLGCILYTLLVGKPPFETSCLKETY----------- 251
Query: 252 PETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
I + +NE + VP +++P+A L++R++ DP RP+ E L
Sbjct: 252 ---IRIKKNEYS------------VPR-----HINPVASALIRRMLHADPTLRPSVAELL 291
Query: 312 ADPYF-KGLAKIEREPSC 328
D +F G A + SC
Sbjct: 292 TDEFFTSGYAPMRLPTSC 309
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 94
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 150
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 151 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 209
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 210 TE--KSACKSSDLWALGCIIYQLVAGLPPF 237
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 96
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 152
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 211
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 212 TE--KSACKSSDLWALGCIIYQLVAGLPPF 239
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 125/292 (42%), Gaps = 51/292 (17%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+GKG + D T E A K + + ++ E+ + R L H +V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 90 IMLPPSKREFKD---IYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
F+D ++VV EL L ++ K LT +++L Q++ +Y+H
Sbjct: 107 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 158
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLA-RVAFSDTPMTVFWTDYVATRWYRAPELCGSF 204
V HRDLK N+ N + ++K+ DFGLA +V + V T Y APE+
Sbjct: 159 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL----CGTPNYIAPEVLSK- 213
Query: 205 FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKAR 264
++ +D+WSIGCI +L GKP F ET +
Sbjct: 214 -KGHSFEVDVWSIGCIMYTLLVGKPPF---------------------ETSCL-----KE 246
Query: 265 KYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
YL + + +P +++P+A L+Q+++ DP RPT E L D +F
Sbjct: 247 TYLRIKKNEYSIP-----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 293
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 138/337 (40%), Gaps = 75/337 (22%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHIS--DAIRILREVKLLRLLR 80
+Y + IG+GSYGVV AI+ T AIK ++ + I+ D RI EV+L++ L
Sbjct: 27 KYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH 86
Query: 81 HPDIVE----------IKRIMLPPSKREFKDIYVVF------------------------ 106
HP+I I +M D VF
Sbjct: 87 HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECN 146
Query: 107 -ELMESDLHQVIKANDDLTREHH-QFFLYQMLRALKYMHTANVYHRDLKPKNIL--ANAN 162
E + +H ++ D + RE + Q+ AL Y+H + HRD+KP+N L N +
Sbjct: 147 EEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS 206
Query: 163 CKLKVCDFGLARVAFSDTPMTVF-WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIF 221
++K+ DFGL++ + + T T ++ APE+ + Y P D WS G +
Sbjct: 207 FEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL 266
Query: 222 AEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQK 281
+L G FPG + D +TI+ V N+K L +
Sbjct: 267 HLLLMGAVPFPG---------VND------ADTISQVLNKK---------------LCFE 296
Query: 282 FPN---VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
PN + PLA LL L+ + +R A AL P+
Sbjct: 297 NPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPW 333
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANAFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E+ + RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKEN--KVPYVTRERDVMSRLDH 91
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 147
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 206
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 207 TE--KSACKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 97 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENG------SLDSFLRKHDAQFT 145
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGLARV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E + + RE ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 88
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 144
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 203
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 204 TE--KSACKSSDLWALGCIIYQLVAGLPPF 231
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 97 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEXMENG------SLDSFLRKHDAQFT 145
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ V A + T + AIK K H + E + + RE ++ L H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 73
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 129
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 188
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 189 TE--KSACKSSDLWALGCIIYQLVAGLPPF 216
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 125/292 (42%), Gaps = 51/292 (17%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+GKG + D T E A K + + ++ E+ + R L H +V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 90 IMLPPSKREFKD---IYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
F+D ++VV EL L ++ K LT +++L Q++ +Y+H
Sbjct: 109 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 160
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLA-RVAFSDTPMTVFWTDYVATRWYRAPELCGSF 204
V HRDLK N+ N + ++K+ DFGLA +V + V T Y APE+
Sbjct: 161 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL----CGTPNYIAPEVLSK- 215
Query: 205 FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKAR 264
++ +D+WSIGCI +L GKP F ET +
Sbjct: 216 -KGHSFEVDVWSIGCIMYTLLVGKPPF---------------------ETSCL-----KE 248
Query: 265 KYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
YL + + +P +++P+A L+Q+++ DP RPT E L D +F
Sbjct: 249 TYLRIKKNEYSIP-----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 295
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 133/315 (42%), Gaps = 58/315 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHP 82
RY +GKG + D T E A K + + ++ E+ + + L +P
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP 102
Query: 83 DIVEIKRIMLPPSKREFKD---IYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRA 138
+V F+D +YVV E+ L ++ K +T ++F+ Q ++
Sbjct: 103 HVVGFHGF--------FEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQG 154
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLA-RVAFSDTPMTVFWTDYVATRWYRA 197
++Y+H V HRDLK N+ N + +K+ DFGLA ++ F T Y A
Sbjct: 155 VQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL----CGTPNYIA 210
Query: 198 PE-LC--GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
PE LC G F +DIWS+GCI +L GKP F +
Sbjct: 211 PEVLCKKGHSFE-----VDIWSLGCILYTLLVGKPPFETSCLKETY-------------- 251
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
I + +NE + VP +++P+A L++R++ DP RP+ E L D
Sbjct: 252 IRIKKNEYS------------VPR-----HINPVASALIRRMLHADPTLRPSVAELLTDE 294
Query: 315 YF-KGLAKIEREPSC 328
+F G A + SC
Sbjct: 295 FFTSGYAPMRLPTSC 309
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 18/222 (8%)
Query: 19 YGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLL 76
Y ++I + IG+G + V A G VA+KK+ +F+ + R ++E+ LL
Sbjct: 28 YNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQ-IFDLMDAKARADCIKEIDLL 86
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIK---ANDDLTREHHQF-F 131
+ L HP++++ + E ++ +V EL ++ DL ++IK L E + +
Sbjct: 87 KQLNHPNVIKYYASFI-----EDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKY 141
Query: 132 LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVA 191
Q+ AL++MH+ V HRD+KP N+ A +K+ D GL R S T V
Sbjct: 142 FVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAA---HSLVG 198
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 233
T +Y +PE + Y DIWS+GC+ E+ + F G
Sbjct: 199 TPYYMSPERIHE--NGYNFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 57/297 (19%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
D ++ EV+G+G++GVVC A + VAIK+I E S+ + E++ L +
Sbjct: 7 DYKEIEVEEVVGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELRQLSRVN 60
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDL---TREHHQFFLYQML 136
HP+IV++ L P + +V E E L+ V+ + L T H + Q
Sbjct: 61 HPNIVKLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 113
Query: 137 RALKYMHTAN---VYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+ + Y+H+ + HRDLKP N+L A LK+CDFG A + T+ +
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA------CDIQTHMTNNKGS 167
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
+ APE+ S Y+ D++S G I EV+T + F D +G P+
Sbjct: 168 AAWMAPEVFEG--SNYSEKCDVFSWGIILWEVITRRKPF-------------DEIGGPAF 212
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+ V N +P PL + P P+ L+ R + DP RP+ EE
Sbjct: 213 RIMWAVHN----------GTRP--PLIKNLPK--PIE-SLMTRCWSKDPSQRPSMEE 254
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 132/297 (44%), Gaps = 57/297 (19%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
D ++ EV+G+G++GVVC A + VAIK+I E S+ + E++ L +
Sbjct: 6 DYKEIEVEEVVGRGAFGVVCKA--KWRAKDVAIKQI----ESESERKAFIVELRQLSRVN 59
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDL---TREHHQFFLYQML 136
HP+IV++ L P + +V E E L+ V+ + L T H + Q
Sbjct: 60 HPNIVKLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 137 RALKYMHTAN---VYHRDLKPKNILANANCK-LKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+ + Y+H+ + HRDLKP N+L A LK+CDFG A + T+ +
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA------CDIQTHMTNNKGS 166
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
+ APE+ S Y+ D++S G I EV+T + F D +G P+
Sbjct: 167 AAWMAPEVFEG--SNYSEKCDVFSWGIILWEVITRRKPF-------------DEIGGPAF 211
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
+ V N +P PL + P P+ L+ R + DP RP+ EE
Sbjct: 212 RIMWAVHN----------GTRP--PLIKNLPK--PIE-SLMTRCWSKDPSQRPSMEE 253
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 106/210 (50%), Gaps = 19/210 (9%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K L+ +GKG++G V C + +TGE VA+KK+ H EH+ D RE+++L+ L+
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRD---FEREIEILKSLQ 70
Query: 81 HPDIVEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLY--QML 136
H +IV+ K + +R K I Y+ + + L + + D H + Y Q+
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERID-----HIKLLQYTSQIC 125
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ ++Y+ T HR+L +NIL ++K+ DFGL +V D + ++
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWY 185
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
APE SK++ A D+WS G + E+ T
Sbjct: 186 APESLTE--SKFSVASDVWSFGVVLYELFT 213
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 97 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENG------SLDSFLRKHDAQFT 145
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 97 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEXMENG------SLDSFLRKHDAQFT 145
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+ Y I E +G G++GVV + TG A K + + H SD + +E++ + +LRHP
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHP 108
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRALK 140
+V + + ++ +++E M +V ++ ++ + ++ Q+ + L
Sbjct: 109 TLVNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 163
Query: 141 YMHTANVYHRDLKPKNIL--ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
+MH N H DLKP+NI+ + +LK+ DFGL A D +V T T + AP
Sbjct: 164 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL--TAHLDPKQSVKVT--TGTAEFAAP 219
Query: 199 ELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKS 235
E+ G YT D+WS+G + +L+G F G++
Sbjct: 220 EVAEGKPVGYYT---DMWSVGVLSYILLSGLSPFGGEN 254
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 97 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENG------SLDSFLRKHDAQFT 145
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 97 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENG------SLDSFLRKHDAQFT 145
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 97 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENG------SLDSFLRKHDAQFT 145
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 26 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 84
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 85 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENG------SLDSFLRKHDAQFT 133
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 134 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 192
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 193 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 233
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 134/289 (46%), Gaps = 43/289 (14%)
Query: 24 RYKILEVIGKGSYGVV--CAAIDTH-TGEKVAIKKIHDVF----EHISDAIRILREVKLL 76
+++L+V+G G+YG V I H TG+ A+K + ++ R R+V L
Sbjct: 55 NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQV-LE 113
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQM 135
+ + P +V + +K ++++ + + +L + + T Q ++ ++
Sbjct: 114 HIRQSPFLVTLHYAFQTETK-----LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEI 168
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
+ AL+++H + +RD+K +NIL ++N + + DFGL++ +D + D+ T Y
Sbjct: 169 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY--DFCGTIEY 226
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETI 255
AP++ S + A+D WS+G + E+LTG SP T+
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG----------------------ASPFTV 264
Query: 256 AVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDR 304
+N +A ++ +PP P + LA L+QRL+ DPK R
Sbjct: 265 DGEKNSQAEISRRILKSEPPYP-----QEMSALAKDLIQRLLMKDPKKR 308
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 97 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENG------SLDSFLRKHDAQFT 145
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 67
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 68 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEXMENG------SLDSFLRKHDAQFT 116
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 175
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 176 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 216
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 96
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 97 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENG------SLDSFLRKHDAQFT 145
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL RV D P
Sbjct: 146 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRV-LEDDPEAA 204
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 205 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 36 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 94
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 95 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENG------SLDSFLRKHDAQFT 143
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 144 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 202
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 203 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
F + DA I +V+G G +G VC+ + + VAIK + + L E
Sbjct: 9 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTE-KQRRDFLGE 67
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFF- 131
++ HP+I+ ++ ++ + K + +V E ME+ + D R+H F
Sbjct: 68 ASIMGQFDHPNIIRLEGVVT-----KSKPVMIVTEYMENG------SLDSFLRKHDAQFT 116
Query: 132 ---LYQMLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
L MLR +KY+ HRDL +NIL N+N KV DFGL+RV D P
Sbjct: 117 VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRV-LEDDPEAA 175
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW +PE + K+T A D+WS G + EV++
Sbjct: 176 YTTRGGKIPIRW-TSPEAIA--YRKFTSASDVWSYGIVLWEVMS 216
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+GKG + D T E A K + + ++ E+ + R L H +V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 90 IMLPPSKREFKD---IYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
F+D ++VV EL L ++ K LT +++L Q++ +Y+H
Sbjct: 85 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
V HRDLK N+ N + ++K+ DFGLA D T Y APE+
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPNYIAPEVLSK-- 191
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARK 265
++ +D+WSIGCI +L GKP F ET +
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPF---------------------ETSCL-----KET 225
Query: 266 YLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
YL + + +P +++P+A L+Q+++ DP RPT E L D +F
Sbjct: 226 YLRIKKNEYSIP-----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 32/259 (12%)
Query: 1 MQQDQTKKELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+ Q Q ELKD DF KI E +G G+ GVV +G +A K IH
Sbjct: 13 LTQKQKVGELKDDDF---------EKISE-LGAGNGGVVFKVSHKPSGLVMARKLIH--- 59
Query: 61 EHISDAIR--ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVI 117
I AIR I+RE+++L P IV +I + E M+ L QV+
Sbjct: 60 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVL 114
Query: 118 KANDDLTREHHQFFLYQMLRALKYMHTAN-VYHRDLKPKNILANANCKLKVCDFGLARVA 176
K + + +++ L Y+ + + HRD+KP NIL N+ ++K+CDFG+
Sbjct: 115 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---- 170
Query: 177 FSDTPMTVFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGK 234
S + +V TR Y +PE L G+ +S + DIWS+G E+ G+ P+ G
Sbjct: 171 -SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS---DIWSMGLSLVEMAVGRYPIGSGS 226
Query: 235 SVVHQLDLITDLLGTPSPE 253
+ +L+ ++ P P+
Sbjct: 227 GSMAIFELLDYIVNEPPPK 245
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+GKG + D T E A K + + ++ E+ + R L H +V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 90 IMLPPSKREFKD---IYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
F+D ++VV EL L ++ K LT +++L Q++ +Y+H
Sbjct: 85 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 136
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
V HRDLK N+ N + ++K+ DFGLA D T Y APE+
Sbjct: 137 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPNYIAPEVLSK-- 191
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARK 265
++ +D+WSIGCI +L GKP F ET +
Sbjct: 192 KGHSFEVDVWSIGCIMYTLLVGKPPF---------------------ETSCL-----KET 225
Query: 266 YLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
YL + + +P +++P+A L+Q+++ DP RPT E L D +F
Sbjct: 226 YLRIKKNEYSIP-----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 271
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 12/210 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRILREVKLLRLLRH 81
+K +++G+GS+ A + T + AIK K H + E + + RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKE--NKVPYVTRERDVMSRLDH 89
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P V++ K F Y +L + I+ +F+ +++ AL+Y
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYA----KNGELLKYIRKIGSFDETCTRFYTAEIVSALEY 145
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRDLKP+NIL N + +++ DFG A+V S +V T Y +PEL
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV-LSPESKQARANXFVGTAQYVSPELL 204
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ D+W++GCI +++ G P F
Sbjct: 205 TE--KSACKSSDLWALGCIIYQLVAGLPPF 232
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 66 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 179
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 180 REFHAEP-VDVWSCGIVLTAMLAGE 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 108/218 (49%), Gaps = 19/218 (8%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
+ Y I E +G G++GVV + TG A K + + H SD + +E++ + +LRHP
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFV--MTPHESDKETVRKEIQTMSVLRHP 214
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRALK 140
+V + + ++ +++E M +V ++ ++ + ++ Q+ + L
Sbjct: 215 TLVNLHDAF-----EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 269
Query: 141 YMHTANVYHRDLKPKNIL--ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
+MH N H DLKP+NI+ + +LK+ DFGL A D +V T T + AP
Sbjct: 270 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGL--TAHLDPKQSVKVT--TGTAEFAAP 325
Query: 199 ELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKS 235
E+ G YT D+WS+G + +L+G F G++
Sbjct: 326 EVAEGKPVGYYT---DMWSVGVLSYILLSGLSPFGGEN 360
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 122/291 (41%), Gaps = 49/291 (16%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+GKG + D T E A K + + ++ E+ + R L H +V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 90 IMLPPSKREFKD---IYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
F+D ++VV EL L ++ K LT +++L Q++ +Y+H
Sbjct: 89 F--------FEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN 140
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
V HRDLK N+ N + ++K+ DFGLA D T Y APE+
Sbjct: 141 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK---KTLCGTPNYIAPEVLSK-- 195
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARK 265
++ +D+WSIGCI +L GKP F ET +
Sbjct: 196 KGHSFEVDVWSIGCIMYTLLVGKPPF---------------------ETSCL-----KET 229
Query: 266 YLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYF 316
YL + + +P +++P+A L+Q+++ DP RPT E L D +F
Sbjct: 230 YLRIKKNEYSIP-----KHINPVAASLIQKMLQTDPTARPTINELLNDEFF 275
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMXGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 102/211 (48%), Gaps = 27/211 (12%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF-------EHISDAIRILREVKLLR 77
++IL +G GS+G V H G A+K + EH +D E +L
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTND------ERLMLS 61
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
++ HP I+ + ++ + I+++ + +E +L +++ + +F+ ++
Sbjct: 62 IVTHPFIIRMWGTF-----QDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVC 116
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
AL+Y+H+ ++ +RDLKP+NIL + N +K+ DFG A+ T DY+
Sbjct: 117 LALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYI------ 170
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
APE+ + Y +ID WS G + E+L G
Sbjct: 171 APEVVST--KPYNKSIDWWSFGILIYEMLAG 199
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 131/305 (42%), Gaps = 51/305 (16%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR---ILREVKLLRLLRHPDI 84
+EV+G G++ V TG+ A+K I S A R + E+ +L+ ++H +I
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKK-----SPAFRDSSLENEIAVLKKIKHENI 68
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V ++ I + Y+V +L+ +L I T + + Q+L A+KY+H
Sbjct: 69 VTLEDIYESTTH-----YYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH 123
Query: 144 TANVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L N K+ + DFGL+++ + T T Y APE+
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA-----CGTPGYVAPEV 178
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
Y+ A+D WSIG I +L G P P E
Sbjct: 179 LAQ--KPYSKAVDCWSIGVITYILLCGYP--------------------PFYEETESKLF 216
Query: 261 EKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLA 320
EK ++ E P + ++ A + L+ DP +R T E+AL+ P+ G
Sbjct: 217 EKIKEGYYEFES----PFWD---DISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNT 269
Query: 321 KIERE 325
+ R+
Sbjct: 270 ALHRD 274
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 103/220 (46%), Gaps = 29/220 (13%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLR 77
D + KI +VIG G +G VC+ G++ VAIK + + L E ++
Sbjct: 5 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTE-KQRRDFLSEASIMG 63
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQ-- 134
HP+++ ++ ++ + + ++ E ME+ L ++ ND QF + Q
Sbjct: 64 QFDHPNVIHLEGVVTKSTP-----VMIITEFMENGSLDSFLRQNDG------QFTVIQLV 112
Query: 135 -MLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTP---MTVFW 186
MLR +KY+ N HR L +NIL N+N KV DFGL+R DT T
Sbjct: 113 GMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSAL 172
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ RW APE + K+T A D+WS G + EV++
Sbjct: 173 GGKIPIRW-TAPEAIQ--YRKFTSASDVWSYGIVMWEVMS 209
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-ILREVKLLRLLRHPDIVE 86
L IG GS+G V A D E VAIKK+ + ++ + I++EV+ L+ LRHP+ ++
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 118
Query: 87 IKRIMLPPSKREFKDIYVVFELM---ESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
+ L RE ++V E SDL +V K L + L+ L Y+H
Sbjct: 119 YRGCYL----REHT-AWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH 171
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ N+ HRD+K NIL + +K+ DFG A + P F V T ++ APE+ +
Sbjct: 172 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXF----VGTPYWMAPEVILA 224
Query: 204 F-FSKYTPAIDIWSIGCIFAEVLTGKP 229
+Y +D+WS+G E+ KP
Sbjct: 225 MDEGQYDGKVDVWSLGITCIELAERKP 251
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+YG V A++ T E VA+K I D+ + I +E+ + +L H ++
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 68 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 181
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 182 REFHAEP-VDVWSCGIVLTAMLAGE 205
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 19/207 (9%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-ILREVKLLRLLRHPDIVE 86
L IG GS+G V A D E VAIKK+ + ++ + I++EV+ L+ LRHP+ ++
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 87 IKRIMLPPSKREFKDIYVVFELM---ESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
+ L RE ++V E SDL +V K L + L+ L Y+H
Sbjct: 80 YRGCYL----REHT-AWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH 132
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ N+ HRD+K NIL + +K+ DFG A + P F V T ++ APE+ +
Sbjct: 133 SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXF----VGTPYWMAPEVILA 185
Query: 204 F-FSKYTPAIDIWSIGCIFAEVLTGKP 229
+Y +D+WS+G E+ KP
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKP 212
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 13/216 (6%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLR- 80
+ ++ + V+GKGS+G V A TG+ A+K + DV D + E ++L L R
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRAL 139
HP + ++ P + ++ V E + DL I+ + +F+ +++ AL
Sbjct: 83 HPFLTQLFCCFQTPDR-----LFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISAL 137
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
++H + +RDLK N+L + K+ DFG+ + + T + T Y APE
Sbjct: 138 MFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT---ATFCGTPDYIAPE 194
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKS 235
+ Y PA+D W++G + E+L G F ++
Sbjct: 195 ILQEML--YGPAVDWWAMGVLLYEMLCGHAPFEAEN 228
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 47/307 (15%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+++ E +G G +G V I TGE+VAIK+ + R E+++++ L HP++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP-KNRERWCLEIQIMKKLNHPNV 74
Query: 85 VEIKRIMLPPSKREFKDI-YVVFELMES-DLHQVIKANDD---LTREHHQFFLYQMLRAL 139
V + + K D+ + E E DL + + ++ L + L + AL
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 140 KYMHTANVYHRDLKPKNILANANCKL---KVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+Y+H + HRDLKP+NI+ + K+ D G A+ + T++V T Y
Sbjct: 135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGTLQYL 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKSVVH-----------QLDLIT 244
APEL KYT +D WS G + E +TG +P P V + +
Sbjct: 191 APELLEQ--KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 248
Query: 245 DLLGT-------PSPETIAVVRNEKARKYLTEMR-----------KKPPVPLFQKFPNVD 286
DL G P+P ++ + K ++L M + P V FQ ++
Sbjct: 249 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI- 307
Query: 287 PLALRLL 293
L+L+LL
Sbjct: 308 -LSLKLL 313
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 133/307 (43%), Gaps = 47/307 (15%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+++ E +G G +G V I TGE+VAIK+ + R E+++++ L HP++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSP-KNRERWCLEIQIMKKLNHPNV 75
Query: 85 VEIKRIMLPPSKREFKDI-YVVFELMES-DLHQVIKANDD---LTREHHQFFLYQMLRAL 139
V + + K D+ + E E DL + + ++ L + L + AL
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 140 KYMHTANVYHRDLKPKNILANANCKL---KVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+Y+H + HRDLKP+NI+ + K+ D G A+ + T++V T Y
Sbjct: 136 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK----ELDQGELCTEFVGTLQYL 191
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKSVVH-----------QLDLIT 244
APEL KYT +D WS G + E +TG +P P V + +
Sbjct: 192 APELLEQ--KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYD 249
Query: 245 DLLGT-------PSPETIAVVRNEKARKYLTEMR-----------KKPPVPLFQKFPNVD 286
DL G P+P ++ + K ++L M + P V FQ ++
Sbjct: 250 DLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSI- 308
Query: 287 PLALRLL 293
L+L+LL
Sbjct: 309 -LSLKLL 314
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ IG GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E M D+ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + +KV DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 109/238 (45%), Gaps = 32/238 (13%)
Query: 1 MQQDQTKKELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+ Q ELKD DF + + +G G+ GVV +G +A K IH
Sbjct: 4 LTQKAKVGELKDDDF----------ERISELGAGNGGVVTKVQHRPSGLIMARKLIH--- 50
Query: 61 EHISDAIR--ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVI 117
I AIR I+RE+++L P IV +I + E M+ L QV+
Sbjct: 51 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVL 105
Query: 118 KANDDLTREHHQFFLYQMLRALKYMHTAN-VYHRDLKPKNILANANCKLKVCDFGLARVA 176
K + E +LR L Y+ + + HRD+KP NIL N+ ++K+CDFG+
Sbjct: 106 KEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGV---- 161
Query: 177 FSDTPMTVFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFP 232
S + +V TR Y APE L G+ +S + DIWS+G E+ G+ P+ P
Sbjct: 162 -SGQLIDSMANSFVGTRSYMAPERLQGTHYSVQS---DIWSMGLSLVELAVGRYPIPP 215
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ IG GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E M D+ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + +KV DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 101/212 (47%), Gaps = 20/212 (9%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y++ E IG GSY V I T + A+K I ++ I IL LR +HP+I
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEIL-----LRYGQHPNI 78
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
+ +K + + K +YVV ELM+ +L I + L+ + + ++Y+H
Sbjct: 79 ITLKDVY-----DDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 144 TANVYHRDLKPKNIL----ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
V HRDLKP NIL + +++CDFG A+ ++ + + Y A + APE
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL-LMTPCYTAN--FVAPE 190
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ Y A DIWS+G + +LTG F
Sbjct: 191 VLER--QGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 106/221 (47%), Gaps = 31/221 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAAID----THTGEKVAIKK--------------------IHD 58
N+Y + + IGKGSYGVV A + T+ KV KK
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 59 VFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIK 118
+ ++ +E+ +L+ L HP++V++ ++ P++ +Y+VFEL+ +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDH---LYMVFELVNQGPVMEVP 129
Query: 119 ANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
L+ + +F+ +++ ++Y+H + HRD+KP N+L + +K+ DFG++ F
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSN-EFK 188
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTP-AIDIWSIG 218
+ ++ V T + APE ++ A+D+W++G
Sbjct: 189 GS--DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMG 227
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 141/305 (46%), Gaps = 47/305 (15%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPD 83
+Y I E +G+G +G+V ++T + +K + K V +D + + +E+ +L + RH +
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVET-SSKKTYMAKFVKV--KGTDQVLVKKEISILNIARHRN 62
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKAND-DLTREHHQFFLYQMLRALKY 141
I+ L S +++ ++FE + D+ + I + +L +++Q+ AL++
Sbjct: 63 ILH-----LHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 142 MHTANVYHRDLKPKNILANA--NCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+H+ N+ H D++P+NI+ + +K+ +FG AR P F + A +Y APE
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQAR---QLKPGDNFRLLFTAPEYY-APE 173
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + A D+WS+G + +L+G I L + + I +
Sbjct: 174 VHQH--DVVSTATDMWSLGTLVYVLLSG---------------INPFLAETNQQIIENIM 216
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGL 319
N A E + F + A+ + RL+ + K R TA EAL P+ K
Sbjct: 217 N--AEYTFDE----------EAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK-- 262
Query: 320 AKIER 324
KIER
Sbjct: 263 QKIER 267
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 75 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S TD T Y PE
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-----TDLCGTLDYLPPE 181
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 182 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 229
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 230 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 266
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 267 -ANSSKPSNCQ 276
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 70 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S TD T Y PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-----TDLCGTLDYLPPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 177 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 224
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 225 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 261
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 262 -ANSSKPSNCQ 271
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 71 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S TD T Y PE
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-----TDLCGTLDYLPPE 177
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 178 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 225
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 226 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 262
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 263 -ANSSKPSNCQ 272
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 103/211 (48%), Gaps = 16/211 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ E +G G++ V A + TG+ A+K I ++ I E+ +LR ++H +I
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKES-SIENEIAVLRKIKHENI 82
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V ++ I P+ +Y+V +L+ +L I T + + Q+L A+ Y+H
Sbjct: 83 VALEDIYESPNH-----LYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLH 137
Query: 144 TANVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L + K+ + DFGL+++ M+ T Y APE+
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMST----ACGTPGYVAPEV 193
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y+ A+D WSIG I +L G P F
Sbjct: 194 LAQ--KPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 137/330 (41%), Gaps = 51/330 (15%)
Query: 10 LKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI 69
+KD F+ Y + K L G+GS+ + + + + A+K I E
Sbjct: 1 MKDSPFYQHYDLDLKDKPL---GEGSFSICRKCVHKKSNQAFAVKIISKRME-----ANT 52
Query: 70 LREVKLLRLLR-HPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLT 124
+E+ L+L HP+IV++ + F D F +ME +L + IK +
Sbjct: 53 QKEITALKLCEGHPNIVKLHEV--------FHDQLHTFLVMELLNGGELFERIKKKKHFS 104
Query: 125 REHHQFFLYQMLRALKYMHTANVYHRDLKPKNIL---ANANCKLKVCDFGLARVAFSDT- 180
+ + +++ A+ +MH V HRDLKP+N+L N N ++K+ DFG AR+ D
Sbjct: 105 ETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ 164
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL 240
P+ T Y APEL + Y + D+WS+G I +L+G+ F H
Sbjct: 165 PLKT----PCFTLHYAAPELLNQ--NGYDESCDLWSLGVILYTMLSGQVPFQS----HDR 214
Query: 241 DLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFD 300
L + +++ K + E + + NV A L+Q L+ D
Sbjct: 215 SLTC-------TSAVEIMKKIKKGDFSFEG---------EAWKNVSQEAKDLIQGLLTVD 258
Query: 301 PKDRPTAEEALADPYFKGLAKIEREPSCQP 330
P R + + + +++ P P
Sbjct: 259 PNKRLKMSGLRYNEWLQDGSQLSSNPLMTP 288
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 70 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S TD T Y PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-----TDLCGTLDYLPPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 177 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 224
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 225 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 261
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 262 -ANSSKPSNCQ 271
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 131/309 (42%), Gaps = 51/309 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
I+ + ++ +Y++ E ++++ ++ + ++ ++ AL Y
Sbjct: 75 ILRLYGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT-DYVATRWYRAPELC 201
H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T DY+ PE+
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL------PPEMI 183
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
+ +D+WS+G + E L GKP F + I+ + T
Sbjct: 184 EGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------------ 229
Query: 262 KARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLA 320
FP+ V A L+ RL+ +P RP E L P+ A
Sbjct: 230 --------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT--A 267
Query: 321 KIEREPSCQ 329
+ +CQ
Sbjct: 268 NSSKPSNCQ 276
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 111/241 (46%), Gaps = 30/241 (12%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILR-EVKLLRLLRHPDIVE 86
E+IG G +G V A G++VA+K HD E IS I +R E KL +L+HP+I+
Sbjct: 13 EIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIA 70
Query: 87 IKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMH--- 143
++ + L + ++ +V E + + + + + Q+ R + Y+H
Sbjct: 71 LRGVCL-----KEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 144 TANVYHRDLKPKNILAN--------ANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
+ HRDLK NIL +N LK+ DFGLAR T M+ +
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-----AGAYAW 180
Query: 196 RAPELC-GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG-KSVVHQLDLITDLLGTPSPE 253
APE+ S FSK + D+WS G + E+LTG+ F G + + + L P P
Sbjct: 181 MAPEVIRASMFSKGS---DVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPS 237
Query: 254 T 254
T
Sbjct: 238 T 238
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 9/205 (4%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ +++ +G+G+ G V A++ T E VA+K I D+ + I +E+ + ++L H ++
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVK-IVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
V+ +RE Y+ E +L I+ + + Q F +Q++ + Y+H
Sbjct: 67 VKFYG-----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRD+KP+N+L + LK+ DFGLA V F T Y APEL
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATV-FRYNNRERLLNKMCGTLPYVAPELLKR 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGK 228
P +D+WS G + +L G+
Sbjct: 181 REFHAEP-VDVWSCGIVLTAMLAGE 204
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 111/238 (46%), Gaps = 32/238 (13%)
Query: 1 MQQDQTKKELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+ Q Q ELKD DF KI E +G G+ GVV +G +A K IH
Sbjct: 56 LTQKQKVGELKDDDF---------EKISE-LGAGNGGVVFKVSHKPSGLVMARKLIH--- 102
Query: 61 EHISDAIR--ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVI 117
I AIR I+RE+++L P IV +I + E M+ L QV+
Sbjct: 103 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVL 157
Query: 118 KANDDLTREHHQFFLYQMLRALKYMHTAN-VYHRDLKPKNILANANCKLKVCDFGLARVA 176
K + + +++ L Y+ + + HRD+KP NIL N+ ++K+CDFG+
Sbjct: 158 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---- 213
Query: 177 FSDTPMTVFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFP 232
S + +V TR Y +PE L G+ +S + DIWS+G E+ G+ P+ P
Sbjct: 214 -SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS---DIWSMGLSLVEMAVGRYPIPP 267
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 132/312 (42%), Gaps = 57/312 (18%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 96 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT-DYVATRWYRAP 198
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T DY+ P
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL------PP 201
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVV 258
E+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 202 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--------- 250
Query: 259 RNEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 251 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI- 286
Query: 318 GLAKIEREPSCQ 329
A + +CQ
Sbjct: 287 -TANSSKPSNCQ 297
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 128/284 (45%), Gaps = 41/284 (14%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEI 87
L+ IGKGS+G V ID HT E VAIK I D+ E + I +E+ +L P I
Sbjct: 24 LDRIGKGSFGEVYKGIDNHTKEVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYITRY 82
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANV 147
L +K ++++ E + + L + L ++L+ L Y+H+
Sbjct: 83 FGSYLKSTK-----LWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERK 137
Query: 148 YHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSK 207
HRD+K N+L + +K+ DFG+A +DT + +V T ++ APE+ S
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAG-QLTDTQIKR--NXFVGTPFWMAPEVIKQ--SA 192
Query: 208 YTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYL 267
Y DIWS+G E+ G+P S +H + ++ L+ SP T L
Sbjct: 193 YDFKADIWSLGITAIELAKGEP---PNSDLHPMRVLF-LIPKNSPPT------------L 236
Query: 268 TEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEAL 311
KP F++F ++ + DP+ RPTA+E L
Sbjct: 237 EGQHSKP----FKEF----------VEACLNKDPRFRPTAKELL 266
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 132/313 (42%), Gaps = 49/313 (15%)
Query: 15 FFTEYGDANRYKILEV--IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILRE 72
+F + N + IL +G+G + VV I TG++ A K + IL E
Sbjct: 19 YFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHE 78
Query: 73 VKLLRLLRH-PDIVEIKRIMLPPSK----REFKDIYVVFELMESDLHQVIKANDDLTREH 127
+ +L L + P ++ + + S+ E+ +F L +L +++ ND +
Sbjct: 79 IAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIR--- 135
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKL---KVCDFGLARVAFSDTPMTV 184
+ Q+L + Y+H N+ H DLKP+NIL ++ L K+ DFG++R +
Sbjct: 136 ---LIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL-- 190
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLIT 244
+ + T Y APE+ + T A D+W+IG I +LT F G+ I+
Sbjct: 191 --REIMGTPEYLAPEILN--YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS 246
Query: 245 DLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDR 304
+ S ET F +V LA +Q L+ +P+ R
Sbjct: 247 QVNVDYSEET---------------------------FSSVSQLATDFIQSLLVKNPEKR 279
Query: 305 PTAEEALADPYFK 317
PTAE L+ + +
Sbjct: 280 PTAEICLSHSWLQ 292
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 132/312 (42%), Gaps = 57/312 (18%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 86
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 87 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 138
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT-DYVATRWYRAP 198
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T DY+ P
Sbjct: 139 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL------PP 192
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVV 258
E+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 193 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--------- 241
Query: 259 RNEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 242 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI- 277
Query: 318 GLAKIEREPSCQ 329
A + +CQ
Sbjct: 278 -TANSSKPSNCQ 288
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 31/237 (13%)
Query: 1 MQQDQTKKELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVF 60
+ Q Q ELKD DF KI E +G G+ GVV +G +A K IH
Sbjct: 21 LTQKQKVGELKDDDF---------EKISE-LGAGNGGVVFKVSHKPSGLVMARKLIH--- 67
Query: 61 EHISDAIR--ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVI 117
I AIR I+RE+++L P IV +I + E M+ L QV+
Sbjct: 68 LEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVL 122
Query: 118 KANDDLTREHHQFFLYQMLRALKYMHTAN-VYHRDLKPKNILANANCKLKVCDFGLARVA 176
K + + +++ L Y+ + + HRD+KP NIL N+ ++K+CDFG+
Sbjct: 123 KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV---- 178
Query: 177 FSDTPMTVFWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP 232
S + +V TR Y +PE L G+ +S + DIWS+G E+ G+ P
Sbjct: 179 -SGQLIDSMANSFVGTRSYMSPERLQGTHYSVQS---DIWSMGLSLVEMAVGRYPIP 231
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 146/337 (43%), Gaps = 64/337 (18%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-------ILREVKLLR 77
Y I E +G G + +V + TG + A K I + S A R I REV +LR
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK---KRQSRASRRGVCREEIEREVSILR 70
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
+ HP+I+ + + + D+ ++ EL+ +L + + L+ E F+ Q+L
Sbjct: 71 QVLHPNIITLHDVYENRT-----DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 137 RALKYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+ Y+HT + H DLKP+NI L + N +K+ DFGLA + V + + T
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGT 181
Query: 193 RWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
+ APE+ Y P D+WSIG I +L+G F LG
Sbjct: 182 PEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPF---------------LGD 221
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
ET+A N A Y + + F LA +++L+ + + R T +E
Sbjct: 222 TKQETLA---NITAVSYDFDE---------EFFSQTSELAKDFIRKLLVKETRKRLTIQE 269
Query: 310 ALADPYFKGL----AKIEREPSCQPISKLEFEFERRR 342
AL P+ + A + RE S + + ++ RRR
Sbjct: 270 ALRHPWITPVDTQQAMVRRE-SVVNLENFKKQYVRRR 305
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 146/337 (43%), Gaps = 57/337 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+++ +G+G+ +V T + A+K V + D + E+ +L L HP+I
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALK----VLKKTVDKKIVRTEIGVLLRLSHPNI 110
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
+++K I P+ +I +V EL+ +L I + + Q+L A+ Y+H
Sbjct: 111 IKLKEIFETPT-----EISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 144 TANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
+ HRDLKP+N+L + LK+ DFGL+++ M T Y APE+
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTV----CGTPGYCAPEI 221
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTG-KPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
Y P +D+WS+G I +L G +P +
Sbjct: 222 LRG--CAYGPEVDMWSVGIITYILLCGFEPFY---------------------------- 251
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPNVDPLALR---LLQRLIAFDPKDRPTAEEALADPYF 316
+E+ +++ R+ + P D ++L L+++LI DPK R T +AL P+
Sbjct: 252 DERGDQFM--FRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309
Query: 317 KG-LAKIEREPSCQPISKLEFEFERRRVTKDDIRELI 352
G A + Q KL+ EF RR K ++ ++
Sbjct: 310 TGKAANFVHMDTAQ--KKLQ-EFNARRKLKAAVKAVV 343
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 131/309 (42%), Gaps = 49/309 (15%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAI-RILREVKLLRLLRHPD 83
Y++ EVIG G+ VV AA EKVAIK+I+ E ++ +L+E++ + HP+
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMES----DLHQVIKANDD-----LTREHHQFFLYQ 134
IV + ++++V +L+ D+ + I A + L L +
Sbjct: 75 IVSYYTSFVVKD-----ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLAR--VAFSDTPMTVFWTDYVAT 192
+L L+Y+H HRD+K NIL + +++ DFG++ D +V T
Sbjct: 130 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 189
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF----PGKSVVHQLDLITDLLG 248
+ APE+ Y DIWS G E+ TG + P K V L L D
Sbjct: 190 PCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYHKYPPMK--VLMLTLQND--- 243
Query: 249 TPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAE 308
PS ET V E +KY RK ++ + DP+ RPTA
Sbjct: 244 PPSLET-GVQDKEMLKKYGKSFRK-------------------MISLCLQKDPEKRPTAA 283
Query: 309 EALADPYFK 317
E L +F+
Sbjct: 284 ELLRHKFFQ 292
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 73 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T Y PE
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPE 179
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 180 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 227
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 228 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 264
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 265 -ANSSKPSNCQ 274
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 70 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T Y PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 224
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 225 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 261
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 262 -ANSSKPSNCQ 271
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 75 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T Y PE
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPE 181
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 182 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 229
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 230 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 266
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 267 -ANSSKPSNCQ 276
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 70 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T Y PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-----TELCGTLDYLPPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 177 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 224
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 225 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 261
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 262 -ANSSKPSNCQ 271
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 126/273 (46%), Gaps = 34/273 (12%)
Query: 9 ELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR 68
ELKD DF KI E +G G+ GVV +G +A K IH I AIR
Sbjct: 5 ELKDDDF---------EKISE-LGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIR 51
Query: 69 --ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTR 125
I+RE+++L P IV +I + E M+ L QV+K +
Sbjct: 52 NQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVLKKAGRIPE 106
Query: 126 EHHQFFLYQMLRALKYMHTAN-VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
+ +++ L Y+ + + HRD+KP NIL N+ ++K+CDFG+ S +
Sbjct: 107 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDE 161
Query: 185 FWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
++V TR Y +PE L G+ +S + DIWS+G E+ G+ P ++ LD I
Sbjct: 162 MANEFVGTRSYMSPERLQGTHYSVQS---DIWSMGLSLVEMAVGRYPRPPMAIFELLDYI 218
Query: 244 TDLLGTPSPETIAVVRNEKARKYLTEMRKKPPV 276
+ P P+ + V + + + ++ + K P
Sbjct: 219 VN---EPPPKLPSAVFSLEFQDFVNKCLIKNPA 248
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 131/309 (42%), Gaps = 49/309 (15%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAI-RILREVKLLRLLRHPD 83
Y++ EVIG G+ VV AA EKVAIK+I+ E ++ +L+E++ + HP+
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN--LEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMES----DLHQVIKANDD-----LTREHHQFFLYQ 134
IV + ++++V +L+ D+ + I A + L L +
Sbjct: 70 IVSYYTSFVVKD-----ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLAR--VAFSDTPMTVFWTDYVAT 192
+L L+Y+H HRD+K NIL + +++ DFG++ D +V T
Sbjct: 125 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGT 184
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF----PGKSVVHQLDLITDLLG 248
+ APE+ Y DIWS G E+ TG + P K V L L D
Sbjct: 185 PCWMAPEVMEQVRG-YDFKADIWSFGITAIELATGAAPYHKYPPMK--VLMLTLQND--- 238
Query: 249 TPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAE 308
PS ET V E +KY RK ++ + DP+ RPTA
Sbjct: 239 PPSLET-GVQDKEMLKKYGKSFRK-------------------MISLCLQKDPEKRPTAA 278
Query: 309 EALADPYFK 317
E L +F+
Sbjct: 279 ELLRHKFFQ 287
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 129/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 95
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 96 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S D T Y PE
Sbjct: 148 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-----DDLCGTLDYLPPE 202
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 203 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 250
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 251 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWI-- 286
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 287 TANSSKPSNCQ 297
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N + L+++GKG++G V + TG A+K + +V + + E ++L+ RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + F Y +L + T E +F+ +++ AL+Y
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+ +V +RD+K +N++ + + +K+ DFGL + SD + T Y APE+
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVL 182
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 183 ED--NDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 25/225 (11%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
A+ ++ + V+G+G++G V A + AIKKI E +S IL EV LL L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST---ILSEVMLLASLNH 61
Query: 82 PDIVEI------KRIMLPP--SKREFKDIYVVFELMESD-LHQVIKA-NDDLTREHHQFF 131
+V +R + P + ++ +++ E E+ L+ +I + N + R+ +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 132 LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF------ 185
Q+L AL Y+H+ + HRDLKP NI + + +K+ DFGLA+ +
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 186 -----WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL 225
T + T Y A E+ Y ID++S+G IF E++
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMI 225
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 140/317 (44%), Gaps = 59/317 (18%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ ++ +G+G +GVV A + AIK+I ++ +++REVK L L HP I
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE-KVMREVKALAKLEHPGI 65
Query: 85 VEIKRIML---------PPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY- 133
V L P S + + +Y+ +L + +L + + L+
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVY--LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHI 123
Query: 134 --QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD-------TPMTV 184
Q+ A++++H+ + HRDLKP NI + +KV DFGL D TPM
Sbjct: 124 FLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 185 FW--TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDL 242
+ T V T+ Y +PE + Y+ +DI+S+G I E+ L+P + + ++
Sbjct: 184 YARHTGQVGTKLYMSPEQIHG--NSYSHKVDIFSLGLILFEL-----LYPFSTQMERVRT 236
Query: 243 ITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPK 302
+TD VRN K PP+ QK+ P ++Q +++ P
Sbjct: 237 LTD------------VRNLKF----------PPL-FTQKY----PCEYVMVQDMLSPSPM 269
Query: 303 DRPTAEEALADPYFKGL 319
+RP A + + F+ L
Sbjct: 270 ERPEAINIIENAVFEDL 286
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 135/318 (42%), Gaps = 57/318 (17%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-------- 68
+ +G Y+ E++G+G VV I T ++ A+K I DV S +
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII-DVTGGGSFSAEEVQELREA 69
Query: 69 ILREVKLLRLLR-HPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTRE 126
L+EV +LR + HP+I+++K F ++VF+LM+ +L + L+ +
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTY---ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEK 124
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFW 186
+ + +L + +H N+ HRDLKP+NIL + + +K+ DFG + +
Sbjct: 125 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---- 180
Query: 187 TDYVATRWYRAPELCGSFFSKYTPA----IDIWSIGCIFAEVLTGKPLFPGKSVVHQLDL 242
+ T Y APE+ + P +D+WS G I +L G P F + + L +
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM 240
Query: 243 ITD---LLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAF 299
I G+P ++ + L+ R +
Sbjct: 241 IMSGNYQFGSP------------------------------EWDDYSDTVKDLVSRFLVV 270
Query: 300 DPKDRPTAEEALADPYFK 317
P+ R TAEEALA P+F+
Sbjct: 271 QPQKRYTAEEALAHPFFQ 288
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N + L+++GKG++G V + TG A+K + +V + + E ++L+ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + F Y +L + T E +F+ +++ AL+Y
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+ +V +RD+K +N++ + + +K+ DFGL + SD + T Y APE+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVL 177
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 178 ED--NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 25/225 (11%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
A+ ++ + V+G+G++G V A + AIKKI E +S IL EV LL L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST---ILSEVMLLASLNH 61
Query: 82 PDIVEI------KRIMLPP--SKREFKDIYVVFELMES-DLHQVIKA-NDDLTREHHQFF 131
+V +R + P + ++ +++ E E+ L+ +I + N + R+ +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 132 LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF------ 185
Q+L AL Y+H+ + HRDLKP NI + + +K+ DFGLA+ +
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 186 -----WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL 225
T + T Y A E+ Y ID++S+G IF E++
Sbjct: 182 GSSDNLTSAIGTAMYVATEVLDG-TGHYNEKIDMYSLGIIFFEMI 225
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 58/305 (19%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y ILE +G G++GVV ++ TG K I+ + D + E+ ++ L HP +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP--LDKYTVKNEISIMNQLHHPKL 110
Query: 85 VEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQF-FLYQMLRAL 139
+ + F+D Y + ++E +L I A D E ++ Q L
Sbjct: 111 INLHDA--------FEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGL 162
Query: 140 KYMHTANVYHRDLKPKNILANAN--CKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
K+MH ++ H D+KP+NI+ +K+ DFGLA D + V AT + A
Sbjct: 163 KHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKV----TTATAEFAA 218
Query: 198 PELCG----SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPE 253
PE+ F++ D+W+IG + +L+G F G+ +
Sbjct: 219 PEIVDREPVGFYT------DMWAIGVLGYVLLSGLSPFAGE------------------D 254
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALAD 313
+ ++N K + + F +V P A ++ L+ +P+ R T +AL
Sbjct: 255 DLETLQNVKRCDWEFDE---------DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305
Query: 314 PYFKG 318
P+ KG
Sbjct: 306 PWLKG 310
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N + L+++GKG++G V + TG A+K + +V + + E ++L+ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + F Y +L + T E +F+ +++ AL+Y
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+ +V +RD+K +N++ + + +K+ DFGL + SD + T Y APE+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVL 177
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 178 ED--NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEI 87
LE IGKGS+G V ID T + VAIK I D+ E + I +E+ +L P + +
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANV 147
L +K ++++ E + + L L ++L+ L Y+H+
Sbjct: 71 YGSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 148 YHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSK 207
HRD+K N+L + + ++K+ DFG+A +DT + +V T ++ APE+ S
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKR--NTFVGTPFWMAPEVIKQ--SA 180
Query: 208 YTPAIDIWSIGCIFAEVLTGKP 229
Y DIWS+G E+ G+P
Sbjct: 181 YDSKADIWSLGITAIELARGEP 202
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEI 87
LE IGKGS+G V ID T + VAIK I D+ E + I +E+ +L P + +
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANV 147
L +K ++++ E + + L L ++L+ L Y+H+
Sbjct: 86 YGSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 140
Query: 148 YHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSK 207
HRD+K N+L + + ++K+ DFG+A +DT + +V T ++ APE+ S
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKR--NXFVGTPFWMAPEVIKQ--SA 195
Query: 208 YTPAIDIWSIGCIFAEVLTGKP 229
Y DIWS+G E+ G+P
Sbjct: 196 YDSKADIWSLGITAIELARGEP 217
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEI 87
LE IGKGS+G V ID T + VAIK I D+ E + I +E+ +L P + +
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANV 147
L +K ++++ E + + L L ++L+ L Y+H+
Sbjct: 71 YGSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 125
Query: 148 YHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSK 207
HRD+K N+L + + ++K+ DFG+A +DT + +V T ++ APE+ S
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKR--NXFVGTPFWMAPEVIKQ--SA 180
Query: 208 YTPAIDIWSIGCIFAEVLTGKP 229
Y DIWS+G E+ G+P
Sbjct: 181 YDSKADIWSLGITAIELARGEP 202
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 11/202 (5%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEI 87
LE IGKGS+G V ID T + VAIK I D+ E + I +E+ +L P + +
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSPYVTKY 90
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANV 147
L +K ++++ E + + L L ++L+ L Y+H+
Sbjct: 91 YGSYLKDTK-----LWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKK 145
Query: 148 YHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSK 207
HRD+K N+L + + ++K+ DFG+A +DT + +V T ++ APE+ S
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKR--NTFVGTPFWMAPEVIKQ--SA 200
Query: 208 YTPAIDIWSIGCIFAEVLTGKP 229
Y DIWS+G E+ G+P
Sbjct: 201 YDSKADIWSLGITAIELARGEP 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N + L+++GKG++G V + TG A+K + +V + + E ++L+ RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + F Y +L + T E +F+ +++ AL+Y
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEY 123
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+ +V +RD+K +N++ + + +K+ DFGL + SD + T Y APE+
Sbjct: 124 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVL 180
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 181 ED--NDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 51/309 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
I+ + ++ +Y++ E ++++ ++ + ++ ++ AL Y
Sbjct: 75 ILRLYGYFHDATR-----VYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC 129
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT-DYVATRWYRAPELC 201
H+ V HRD+KP+N+L + +LK+ DFG + A S + T DY+ PE+
Sbjct: 130 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYL------PPEMI 183
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNE 261
+ +D+WS+G + E L GKP F + I+ + T
Sbjct: 184 EGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT------------ 229
Query: 262 KARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLA 320
FP+ V A L+ RL+ +P RP E L P+ A
Sbjct: 230 --------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT--A 267
Query: 321 KIEREPSCQ 329
+ +CQ
Sbjct: 268 NSSKPSNCQ 276
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N + L+++GKG++G V + TG A+K + +V + + E ++L+ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + F Y +L + T E +F+ +++ AL+Y
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+ +V +RD+K +N++ + + +K+ DFGL + SD + T Y APE+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVL 177
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 178 ED--NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N + L+++GKG++G V + TG A+K + +V + + E ++L+ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + F Y +L + T E +F+ +++ AL+Y
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+ +V +RD+K +N++ + + +K+ DFGL + SD + T Y APE+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KXFCGTPEYLAPEVL 177
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 178 ED--NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 10/207 (4%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N + L+++GKG++G V + TG A+K + +V + + E ++L+ RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + F Y +L + T E +F+ +++ AL+Y
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYA----NGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+ +V +RD+K +N++ + + +K+ DFGL + SD + T Y APE+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATM---KTFCGTPEYLAPEVL 177
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 178 ED--NDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 59/319 (18%)
Query: 17 TEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-------- 68
+ +G Y+ E++G+G VV I T ++ A+K I DV S +
Sbjct: 11 STHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII-DVTGGGSFSAEEVQELREA 69
Query: 69 ILREVKLLRLLR-HPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTRE 126
L+EV +LR + HP+I+++K F ++VF+LM+ +L + L+ +
Sbjct: 70 TLKEVDILRKVSGHPNIIQLKDTY---ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEK 124
Query: 127 HHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLA-RVAFSDTPMTVF 185
+ + +L + +H N+ HRDLKP+NIL + + +K+ DFG + ++ + +V
Sbjct: 125 ETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSV- 183
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPA----IDIWSIGCIFAEVLTGKPLFPGKSVVHQLD 241
T Y APE+ + P +D+WS G I +L G P F + + L
Sbjct: 184 ----CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLR 239
Query: 242 LITD---LLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIA 298
+I G+P ++ + L+ R +
Sbjct: 240 MIMSGNYQFGSP------------------------------EWDDYSDTVKDLVSRFLV 269
Query: 299 FDPKDRPTAEEALADPYFK 317
P+ R TAEEALA P+F+
Sbjct: 270 VQPQKRYTAEEALAHPFFQ 288
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEK---VAIKKIHDVFEHISDAIRILRE 72
FT +A+R I ++IG G G VC G++ VAIK + + L E
Sbjct: 42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE-RQRRDFLSE 100
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREH-HQFF 131
++ HP+I+ ++ ++ + +V E ME+ + D R H QF
Sbjct: 101 ASIMGQFDHPNIIRLEGVVT-----RGRLAMIVTEYMENG------SLDTFLRTHDGQFT 149
Query: 132 LYQ---MLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
+ Q MLR ++Y+ HRDL +N+L ++N KV DFGL+RV D P
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-LEDDPDAA 208
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ T + RW APE F ++ A D+WS G + EVL
Sbjct: 209 YTTTGGKIPIRW-TAPEAIA--FRTFSSASDVWSFGVVMWEVLA 249
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 133/315 (42%), Gaps = 57/315 (18%)
Query: 20 GDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--------ILR 71
G Y+ E++G+G VV I T ++ A+K I DV S + L+
Sbjct: 1 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKII-DVTGGGSFSAEEVQELREATLK 59
Query: 72 EVKLLRLLR-HPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ 129
EV +LR + HP+I+++K F ++VF+LM+ +L + L+ + +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTY---ETNTF--FFLVFDLMKKGELFDYLTEKVTLSEKETR 114
Query: 130 FFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ +L + +H N+ HRDLKP+NIL + + +K+ DFG + + +
Sbjct: 115 KIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL----REV 170
Query: 190 VATRWYRAPELCGSFFSKYTPA----IDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITD 245
T Y APE+ + P +D+WS G I +L G P F + + L +I
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMS 230
Query: 246 ---LLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPK 302
G+P ++ + L+ R + P+
Sbjct: 231 GNYQFGSP------------------------------EWDDYSDTVKDLVSRFLVVQPQ 260
Query: 303 DRPTAEEALADPYFK 317
R TAEEALA P+F+
Sbjct: 261 KRYTAEEALAHPFFQ 275
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 57/312 (18%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 74
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 75 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT-DYVATRWYRAP 198
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T DY+ P
Sbjct: 127 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYL------PP 180
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVV 258
E + +D+WS+G + E L GKP F + I+ + T
Sbjct: 181 EXIEG--RXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--------- 229
Query: 259 RNEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 230 -----------------------FPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWIT 266
Query: 318 GLAKIEREPSCQ 329
A + +CQ
Sbjct: 267 --ANSSKPSNCQ 276
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 71 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T Y PE
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTL-----CGTLDYLPPE 177
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 178 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 225
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 226 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 262
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 263 -ANSSKPSNCQ 272
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 102/213 (47%), Gaps = 22/213 (10%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
Y++ E IG GSY V I T + A+K I ++ I IL LR +HP+I
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEIL-----LRYGQHPNI 78
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRALKYM 142
+ +K + + K +YVV EL + L ++++ RE L+ + + ++Y+
Sbjct: 79 ITLKDVY-----DDGKYVYVVTELXKGGELLDKILRQKFFSEREA-SAVLFTITKTVEYL 132
Query: 143 HTANVYHRDLKPKNIL----ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
H V HRDLKP NIL + +++CDFG A+ ++ + + Y A + AP
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL-LXTPCYTAN--FVAP 189
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
E+ Y A DIWS+G + LTG F
Sbjct: 190 EVLER--QGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 130/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 72 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ +FG + A S T+ T Y PE
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL-----CGTLDYLPPE 178
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 179 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 226
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 227 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 263
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 264 -ANSSKPSNCQ 273
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 12/228 (5%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHI--SDAIRILREVKLLRLL 79
A Y +++VIG+G++G V + +KV K+ FE I SD+ E ++
Sbjct: 74 AEDYDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 132
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRAL 139
P +V+ L + ++ K +Y+V E M + +N D+ + +F+ +++ AL
Sbjct: 133 NSPWVVQ-----LFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLAL 187
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+H+ + HRD+KP N+L + + LK+ DFG + +T M V V T Y +PE
Sbjct: 188 DAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC-MKMDETGM-VHCDTAVGTPDYISPE 245
Query: 200 LCGSFFSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITD 245
+ S Y D WS+G E+L G F S+V I D
Sbjct: 246 VLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD 293
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 73 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T Y PE
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPE 179
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 180 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 227
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 228 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 127/298 (42%), Gaps = 55/298 (18%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 70
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 71 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT-DYVATRWYRAP 198
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T DY+ P
Sbjct: 123 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYL------PP 176
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVV 258
E+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 177 EMIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT--------- 225
Query: 259 RNEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 226 -----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 260
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 107/223 (47%), Gaps = 18/223 (8%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHI--SDAIRILREVKLLRLLR 80
+Y + +++G+GSYG V +D+ T + A+K + + + +E++LLR LR
Sbjct: 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR 64
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDL---TREHHQFFLYQMLR 137
H +++++ ++ E + +Y+V E + +++ + + + H +F Q++
Sbjct: 65 HKNVIQLVDVLY---NEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFC-QLID 120
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV----AFSDTPMTVFWTDYVATR 193
L+Y+H+ + H+D+KP N+L LK+ G+A A DT T +
Sbjct: 121 GLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-----QGSP 175
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSV 236
++ PE+ + +DIWS G + TG F G ++
Sbjct: 176 AFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI 218
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 68
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 69 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T Y PE
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPE 175
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 176 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 223
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 224 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 258
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 125/306 (40%), Gaps = 35/306 (11%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIK 88
+V+G+G++ V I+ T ++ A+K I HI R+ REV++L + V
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRS--RVFREVEMLYQCQGHRNVLEL 76
Query: 89 RIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANV 147
R Y+VFE M + I + + AL ++H +
Sbjct: 77 IEFFEEEDR----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 148 YHRDLKPKNILA---NANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW----YRAPEL 200
HRDLKP+NIL N +K+CDFGL + + T + T Y APE+
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 201 CGSF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAV 257
+F S Y D+WS+G I +L+G P F G+ G E
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR--------CGSDCGWDRGEACPA 244
Query: 258 VRN---EKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+N E ++ E K + ++ A L+ +L+ D K R +A + L P
Sbjct: 245 CQNMLFESIQEGKYEFPDK-------DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297
Query: 315 YFKGLA 320
+ +G A
Sbjct: 298 WVQGCA 303
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ IG GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + +KV DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 85
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 86 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 134
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T WT T
Sbjct: 135 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WT-LCGTP 188
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 189 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 101 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T WT T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WT-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 74 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T Y PE
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPE 180
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 181 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 228
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 229 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 263
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 129/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 71
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 72 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S + T Y PE
Sbjct: 124 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL-----CGTLDYLPPE 178
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 179 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 226
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 227 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 263
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 264 -ANSSKPSNCQ 273
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ ++ EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N++ + +KV DFGLA+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 135/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 69
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 70 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 121
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S + T+
Sbjct: 122 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL----TEP 177
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 178 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 217
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 218 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 272
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 273 FMNHPWIMQSTKVPQTP 289
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 23 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 75
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 76 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 127
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 128 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 183
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 184 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 223
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 224 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 278
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 279 FMNHPWIMQSTKVPQTP 295
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 129/311 (41%), Gaps = 55/311 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 73 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S + T Y PE
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL-----CGTLDYLPPE 179
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 180 MIEGRM--HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 227
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPYFKG 318
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 228 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT- 264
Query: 319 LAKIEREPSCQ 329
A + +CQ
Sbjct: 265 -ANSSKPSNCQ 274
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 25 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 77
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 78 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 129
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 130 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 185
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 186 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 225
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 226 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 280
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 281 FMNHPWIMQSTKVPQTP 297
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+GKG +G V A + + +A+K + E ++ REV++ LRHP+I+ +
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 90 IMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRALKYMHTA 145
F D V+ ++E + L V + L+R Q ++ ++ AL Y H+
Sbjct: 80 Y--------FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
V HRD+KP+N+L +N +LK+ DFG + A S T+ T Y PE+
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPEMIEG-- 184
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ +D+WS+G + E L G P F
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 18 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 70
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 71 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 122
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 123 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 178
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 179 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 218
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 219 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 273
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 274 FMNHPWIMQSTKVPQTP 290
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTG-----EKVAIKKIHDVFEHISDAIRILREVKL 75
D + ++ IG G +G+V H G +KVAIK I + D I E ++
Sbjct: 5 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEV 55
Query: 76 LRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQM 135
+ L HP +V++ + L E I +VFE ME H + D R F +
Sbjct: 56 MMKLSHPKLVQLYGVCL-----EQAPICLVFEFME---HGCLS---DYLRTQRGLFAAET 104
Query: 136 L--------RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
L + Y+ A+V HRDL +N L N +KV DFG+ R D + T
Sbjct: 105 LLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 164
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +W +PE+ FS+Y+ D+WS G + EV + GK + +S
Sbjct: 165 KF-PVKW-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 209
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 71
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 72 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 179
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 180 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 219
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 220 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 274
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 275 FMNHPWIMQSTKVPQTP 291
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 24 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 76
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 77 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 128
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 129 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 184
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 185 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 224
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 225 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 279
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 280 FMNHPWIMQSTKVPQTP 296
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 33 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 85
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 86 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 137
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 138 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 193
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 194 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 233
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 234 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 288
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 289 FMNHPWIMQSTKVPQTP 305
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 101/224 (45%), Gaps = 29/224 (12%)
Query: 16 FTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEK---VAIKKIHDVFEHISDAIRILRE 72
FT +A+R I ++IG G G VC G++ VAIK + + L E
Sbjct: 42 FTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTE-RQRRDFLSE 100
Query: 73 VKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREH-HQFF 131
++ HP+I+ ++ ++ + +V E ME+ + D R H QF
Sbjct: 101 ASIMGQFDHPNIIRLEGVVT-----RGRLAMIVTEYMEN------GSLDTFLRTHDGQFT 149
Query: 132 LYQ---MLRA----LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
+ Q MLR ++Y+ HRDL +N+L ++N KV DFGL+RV D P
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV-LEDDPDAA 208
Query: 185 FWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
T + RW APE F ++ A D+WS G + EVL
Sbjct: 209 XTTTGGKIPIRWT-APEAIA--FRTFSSASDVWSFGVVMWEVLA 249
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 69
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 70 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 121
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 122 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 177
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 178 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 217
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 218 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 272
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 273 FMNHPWIMQSTKVPQTP 289
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 115
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 116 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 167
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 168 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 223
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 224 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 263
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 264 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 318
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 319 FMNHPWIMQSTKVPQTP 335
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 69 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 121
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 122 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 173
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 174 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 229
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 230 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 269
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 270 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 324
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 325 FMNHPWIMQSTKVPQTP 341
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 124/297 (41%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 73 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S D T Y PE
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-----DDLCGTLDYLPPE 179
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 180 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 227
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 228 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 134/317 (42%), Gaps = 59/317 (18%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 71
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 72 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 179
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
T +Y APE+ G KY + D+WS+G I +L G P F
Sbjct: 180 CYTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 219
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 220 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 274
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 275 FMNHPWIMQSTKVPQTP 291
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 9 ELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR 68
ELKD DF KI E +G G+ GVV +G +A K IH I AIR
Sbjct: 2 ELKDDDF---------EKISE-LGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIR 48
Query: 69 --ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTR 125
I+RE+++L P IV +I + E M+ L QV+K +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVLKKAGRIPE 103
Query: 126 EHHQFFLYQMLRALKYMHTAN-VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
+ +++ L Y+ + + HRD+KP NIL N+ ++K+CDFG+ S +
Sbjct: 104 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDS 158
Query: 185 FWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+V TR Y +PE L G+ +S + DIWS+G E+ G+
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQS---DIWSMGLSLVEMAVGR 200
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
I E IG GS+G V A + H G VA+K + + H LREV +++ LRHP+IV
Sbjct: 40 NIKEKIGAGSFGTVHRA-EWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
+ P Y+ + LH+ A + L Y + + + Y+H
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 146 N--VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N + HRDLK N+L + +KVCDFGL+R+ S + T + APE+
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXS---KXAAGTPEWMAPEVLRD 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT 226
S D++S G I E+ T
Sbjct: 214 EPSNEKS--DVYSFGVILWELAT 234
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 124/297 (41%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 70 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T T Y PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-----TXLCGTLDYLPPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 177 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 224
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 225 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 9 ELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR 68
ELKD DF KI E +G G+ GVV +G +A K IH I AIR
Sbjct: 2 ELKDDDF---------EKISE-LGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIR 48
Query: 69 --ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTR 125
I+RE+++L P IV +I + E M+ L QV+K +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVLKKAGRIPE 103
Query: 126 EHHQFFLYQMLRALKYMHTAN-VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
+ +++ L Y+ + + HRD+KP NIL N+ ++K+CDFG+ S +
Sbjct: 104 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDS 158
Query: 185 FWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+V TR Y +PE L G+ +S + DIWS+G E+ G+
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQS---DIWSMGLSLVEMAVGR 200
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 105/225 (46%), Gaps = 31/225 (13%)
Query: 9 ELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR 68
ELKD DF KI E +G G+ GVV +G +A K IH I AIR
Sbjct: 2 ELKDDDF---------EKISE-LGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIR 48
Query: 69 --ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTR 125
I+RE+++L P IV +I + E M+ L QV+K +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVLKKAGRIPE 103
Query: 126 EHHQFFLYQMLRALKYMHTAN-VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
+ +++ L Y+ + + HRD+KP NIL N+ ++K+CDFG+ S +
Sbjct: 104 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDS 158
Query: 185 FWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+V TR Y +PE L G+ +S + DIWS+G E+ G+
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQS---DIWSMGLSLVEMAVGR 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 9 ELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR 68
ELKD DF KI E +G G+ GVV +G +A K IH I AIR
Sbjct: 2 ELKDDDF---------EKISE-LGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIR 48
Query: 69 --ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTR 125
I+RE+++L P IV +I + E M+ L QV+K +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVLKKAGRIPE 103
Query: 126 EHHQFFLYQMLRALKYMHTAN-VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
+ +++ L Y+ + + HRD+KP NIL N+ ++K+CDFG+ S +
Sbjct: 104 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDS 158
Query: 185 FWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP 232
+V TR Y +PE L G+ +S + DIWS+G E+ G+ P
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQS---DIWSMGLSLVEMAVGRYPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 106/229 (46%), Gaps = 31/229 (13%)
Query: 9 ELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR 68
ELKD DF KI E +G G+ GVV +G +A K IH I AIR
Sbjct: 2 ELKDDDF---------EKISE-LGAGNGGVVFKVSHKPSGLVMARKLIH---LEIKPAIR 48
Query: 69 --ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTR 125
I+RE+++L P IV +I + E M+ L QV+K +
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICMEHMDGGSLDQVLKKAGRIPE 103
Query: 126 EHHQFFLYQMLRALKYMHTAN-VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
+ +++ L Y+ + + HRD+KP NIL N+ ++K+CDFG+ S +
Sbjct: 104 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGV-----SGQLIDS 158
Query: 185 FWTDYVATRWYRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFP 232
+V TR Y +PE L G+ +S + DIWS+G E+ G+ P
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYSVQS---DIWSMGLSLVEMAVGRYPIP 204
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 112/219 (51%), Gaps = 13/219 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA-IRILREVKLLRLLRHPD 83
++IL+VIG+G++G V A + +KV KI + +E + A RE + +L + D
Sbjct: 76 FEILKVIGRGAFGEV-AVVKLKNADKVFAMKILNKWEMLKRAETACFREER--DVLVNGD 132
Query: 84 IVEIKRIMLPPSKREFKDIYVVFEL-MESDLHQVI-KANDDLTREHHQFFLYQMLRALKY 141
I L + ++ ++Y+V + + DL ++ K D L E +F+L +M+ A+
Sbjct: 133 SKWI--TTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDS 190
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRD+KP NIL + N +++ DFG D TV + V T Y +PE+
Sbjct: 191 VHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--TVQSSVAVGTPDYISPEIL 248
Query: 202 GSFF---SKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+ +Y P D WS+G E+L G+ F +S+V
Sbjct: 249 QAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV 287
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 31/284 (10%)
Query: 31 IGKGSYGVV--CA--AIDTHTGEKVAIKKI--HDVFEHISDAIRILREVKLLRLLRHPDI 84
+G+G +G V C +TGE+VA+K + HI+D + +E+++LR L H +I
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD---LKKEIEILRNLYHENI 73
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQF-FLYQMLRALKYM 142
V+ K I K ++ E + S L + + N + Q + Q+ + + Y+
Sbjct: 74 VKYKGICTEDGGNGIK---LIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
+ HRDL +N+L + ++K+ DFGL + +D D + ++ APE
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL- 189
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
SK+ A D+WS G E+LT S + L ++G P+ + V R
Sbjct: 190 -MQSKFYIASDVWSFGVTLHELLT-----YCDSDSSPMALFLKMIG-PTHGQMTVTRLVN 242
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPT 306
K K+ P P PN +L+++ F P +R +
Sbjct: 243 TLK----EGKRLPCP-----PNCPDEVYQLMRKCWEFQPSNRTS 277
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 73 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ +FG + A S T+ T Y PE
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTL-----CGTLDYLPPE 179
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 180 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 227
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 228 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 124/297 (41%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + +A+K + E ++ REV++ LRHP+
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 66
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 67 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 118
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S T+ T Y PE
Sbjct: 119 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTL-----CGTLDYLPPE 173
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 174 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 221
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 222 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 256
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 31/233 (13%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+ L+VIGKGS+G V A H E+V A+++L++ +L+ I
Sbjct: 40 FHFLKVIGKGSFGKVLLA--RHKAEEVFY------------AVKVLQKKAILKKKEEKHI 85
Query: 85 VEIKRIMLPPSKREF-----------KDIYVVFELMES-DLHQVIKANDDLTREHHQFFL 132
+ + ++L K F +Y V + + +L ++ +F+
Sbjct: 86 MSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYA 145
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
++ AL Y+H+ N+ +RDLKP+NIL ++ + + DFGL + T + + T
Sbjct: 146 AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTT---STFCGT 202
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITD 245
Y APE+ Y +D W +G + E+L G P F ++ D I +
Sbjct: 203 PEYLAPEVLHK--QPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN 253
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ ++ EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N++ + ++V DFGLA+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 64/337 (18%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-------ILREVKLLR 77
Y I E +G G + +V + TG + A K I + S A R I REV +LR
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK---KRQSRASRRGVSREEIEREVSILR 70
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
+ H +++ + + + D+ ++ EL+ +L + + L+ E F+ Q+L
Sbjct: 71 QVLHHNVITLHDVYENRT-----DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 137 RALKYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+ Y+HT + H DLKP+NI L + N +K+ DFGLA + V + + T
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGT 181
Query: 193 RWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
+ APE+ Y P D+WSIG I +L+G F LG
Sbjct: 182 PEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPF---------------LGD 221
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
ET+A N A Y + + F LA +++L+ + + R T +E
Sbjct: 222 TKQETLA---NITAVSYDFDE---------EFFSQTSELAKDFIRKLLVKETRKRLTIQE 269
Query: 310 ALADPYFKGL----AKIEREPSCQPISKLEFEFERRR 342
AL P+ + A + RE S + ++ RRR
Sbjct: 270 ALRHPWITPVDNQQAMVRRE-SVVNLENFRKQYVRRR 305
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 20/206 (9%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+GKG +G V A + + +A+K + E ++ REV++ LRHP+I+ +
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 90 IMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRALKYMHTA 145
F D V+ ++E + L V + L+R Q ++ ++ AL Y H+
Sbjct: 80 Y--------FHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
V HRD+KP+N+L +N +LK+ DFG + A S T+ T Y PE+
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTL-----CGTLDYLPPEMIEG-- 184
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKPLF 231
+ +D+WS+G + E L G P F
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 144/337 (42%), Gaps = 64/337 (18%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-------ILREVKLLR 77
Y I E +G G + +V + TG + A K I + S A R I REV +LR
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK---KRQSRASRRGVSREEIEREVSILR 70
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
+ H +++ + + + D+ ++ EL+ +L + + L+ E F+ Q+L
Sbjct: 71 QVLHHNVITLHDVYENRT-----DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 137 RALKYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+ Y+HT + H DLKP+NI L + N +K+ DFGLA + V + + T
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGT 181
Query: 193 RWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
+ APE+ Y P D+WSIG I +L+G F LG
Sbjct: 182 PEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPF---------------LGD 221
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
ET+A N A Y + + F LA +++L+ + + R T +E
Sbjct: 222 TKQETLA---NITAVSYDFDE---------EFFSQTSELAKDFIRKLLVKETRKRLTIQE 269
Query: 310 ALADPYFKGL----AKIEREPSCQPISKLEFEFERRR 342
AL P+ + A + RE S + ++ RRR
Sbjct: 270 ALRHPWITPVDNQQAMVRRE-SVVNLENFRKQYVRRR 305
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 128/284 (45%), Gaps = 31/284 (10%)
Query: 31 IGKGSYGVV--CA--AIDTHTGEKVAIKKI--HDVFEHISDAIRILREVKLLRLLRHPDI 84
+G+G +G V C +TGE+VA+K + HI+D + +E+++LR L H +I
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD---LKKEIEILRNLYHENI 85
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQF-FLYQMLRALKYM 142
V+ K I ++ I ++ E + S L + + N + Q + Q+ + + Y+
Sbjct: 86 VKYKGIC---TEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
+ HRDL +N+L + ++K+ DFGL + +D D + ++ APE
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL- 201
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEK 262
SK+ A D+WS G E+LT S + L ++G P+ + V R
Sbjct: 202 -MQSKFYIASDVWSFGVTLHELLT-----YCDSDSSPMALFLKMIG-PTHGQMTVTRLVN 254
Query: 263 ARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPT 306
K K+ P P PN +L+++ F P +R +
Sbjct: 255 TLK----EGKRLPCP-----PNCPDEVYQLMRKCWEFQPSNRTS 289
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTG-----EKVAIKKIHDVFEHISDAIRILREVKL 75
D + ++ IG G +G+V H G +KVAIK I + D I E ++
Sbjct: 5 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEV 55
Query: 76 LRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQM 135
+ L HP +V++ + L E I +VFE ME H + D R F +
Sbjct: 56 MMKLSHPKLVQLYGVCL-----EQAPICLVFEFME---HGCLS---DYLRTQRGLFAAET 104
Query: 136 L--------RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
L + Y+ A V HRDL +N L N +KV DFG+ R D + T
Sbjct: 105 LLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 164
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +W +PE+ FS+Y+ D+WS G + EV + GK + +S
Sbjct: 165 KF-PVKW-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 209
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTG-----EKVAIKKIHDVFEHISDAIRILREVKL 75
D + ++ IG G +G+V H G +KVAIK I + D I E ++
Sbjct: 3 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEV 53
Query: 76 LRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQM 135
+ L HP +V++ + L E I +VFE ME H + D R F +
Sbjct: 54 MMKLSHPKLVQLYGVCL-----EQAPICLVFEFME---HGCLS---DYLRTQRGLFAAET 102
Query: 136 L--------RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
L + Y+ A V HRDL +N L N +KV DFG+ R D + T
Sbjct: 103 LLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 162
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +W +PE+ FS+Y+ D+WS G + EV + GK + +S
Sbjct: 163 KF-PVKW-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 207
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 11/212 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRHPD 83
+ L V+GKGS+G V A T E AIK + DV D + E ++L LL P
Sbjct: 21 FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPP 80
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
+ L + +Y V E + DL I+ F+ ++ L ++
Sbjct: 81 FL----TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFL 136
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H + +RDLK N++ ++ +K+ DFG+ + D T ++ T Y APE+
Sbjct: 137 HKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTT---REFCGTPDYIAPEIIA 193
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 234
+ Y ++D W+ G + E+L G+P F G+
Sbjct: 194 --YQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 223
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 20/231 (8%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHPDIVEIKR 89
+G+G+YGVV +G+ +A+K+I + R+L ++ + +R + P V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 90 IMLPPSKREFKDIYVVFELMESDL----HQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
+ RE D+++ ELM++ L QVI + + +++AL+++H+
Sbjct: 118 ALF----RE-GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 172
Query: 146 -NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSF 204
+V HRD+KP N+L NA ++K+CDFG++ T+ + Y APE
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI----DAGCKPYMAPERINPE 228
Query: 205 FSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPE 253
++ Y+ DIWS+G E+ + FP S + ++ PSP+
Sbjct: 229 LNQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVEEPSPQ 277
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTG-----EKVAIKKIHDVFEHISDAIRILREVKL 75
D + ++ IG G +G+V H G +KVAIK I + D I E ++
Sbjct: 8 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEV 58
Query: 76 LRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQM 135
+ L HP +V++ + L E I +VFE ME H + D R F +
Sbjct: 59 MMKLSHPKLVQLYGVCL-----EQAPICLVFEFME---HGCLS---DYLRTQRGLFAAET 107
Query: 136 L--------RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
L + Y+ A V HRDL +N L N +KV DFG+ R D + T
Sbjct: 108 LLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 167
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +W +PE+ FS+Y+ D+WS G + EV + GK + +S
Sbjct: 168 KF-PVKW-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 124/297 (41%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 72
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 73 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S + T Y PE
Sbjct: 125 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL-----CGTLDYLPPE 179
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 180 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 227
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 228 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 262
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 124/297 (41%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 70 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S + T Y PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL-----CGTLDYLPPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 177 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 224
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 225 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 120
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 121 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T WT T
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGAT-----WT-LCGTP 223
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 224 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 124/297 (41%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + + +A+K + E ++ REV++ LRHP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 70 ILRLYGY--------FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S + T Y PE
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXL-----CGTLDYLPPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 177 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFT---------- 224
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 225 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 38/229 (16%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTG-----EKVAIKKIHDVFEHISDAIRILREVKL 75
D + ++ IG G +G+V H G +KVAIK I + D I E ++
Sbjct: 25 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIKEGSMSEDDFIE---EAEV 75
Query: 76 LRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQM 135
+ L HP +V++ + L E I +VFE ME H + D R F +
Sbjct: 76 MMKLSHPKLVQLYGVCL-----EQAPICLVFEFME---HGCLS---DYLRTQRGLFAAET 124
Query: 136 L--------RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
L + Y+ A V HRDL +N L N +KV DFG+ R D + T
Sbjct: 125 LLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 184
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +W +PE+ FS+Y+ D+WS G + EV + GK + +S
Sbjct: 185 KF-PVKW-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 229
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 101 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 101 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 101 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 105/225 (46%), Gaps = 25/225 (11%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
A+ ++ + V+G+G++G V A + AIKKI E +S IL EV LL L H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLST---ILSEVXLLASLNH 61
Query: 82 PDIV-------EIKRIMLPPSKREFKD-IYVVFELMES-DLHQVIKA-NDDLTREHHQFF 131
+V E + + P + + K +++ E E+ L+ +I + N + R+ +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 132 LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF------ 185
Q+L AL Y+H+ + HR+LKP NI + + +K+ DFGLA+ +
Sbjct: 122 FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLP 181
Query: 186 -----WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVL 225
T + T Y A E+ Y ID +S+G IF E +
Sbjct: 182 GSSDNLTSAIGTAXYVATEVLDG-TGHYNEKIDXYSLGIIFFEXI 225
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 92
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 93 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 141
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 195
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 196 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 101 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 145/337 (43%), Gaps = 64/337 (18%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-------ILREVKLLR 77
Y I E +G G + +V + TG + A K I + S A R I REV +LR
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK---KRQSRASRRGVSREEIEREVSILR 70
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
+ H +++ + + + D+ ++ EL+ +L + + L+ E F+ Q+L
Sbjct: 71 QVLHHNVITLHDVYENRT-----DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 137 RALKYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+ Y+HT + H DLKP+NI L + N +K+ DFGLA + V + + T
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGT 181
Query: 193 RWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
+ APE+ Y P D+WSIG I +L+G F LG
Sbjct: 182 PEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPF---------------LGD 221
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
ET+A + + + + E F + LA +++L+ + + R T +E
Sbjct: 222 TKQETLANITS-VSYDFDEEF-----------FSHTSELAKDFIRKLLVKETRKRLTIQE 269
Query: 310 ALADPYFKGL----AKIEREPSCQPISKLEFEFERRR 342
AL P+ + A + RE S + ++ RRR
Sbjct: 270 ALRHPWITPVDNQQAMVRRE-SVVNLENFRKQYVRRR 305
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 10/203 (4%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
I E IG GS+G V A + H G VA+K + + H LREV +++ LRHP+IV
Sbjct: 40 NIKEKIGAGSFGTVHRA-EWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIV 97
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
+ P Y+ + LH+ A + L Y + + + Y+H
Sbjct: 98 LFMGAVTQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 146 N--VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N + HR+LK N+L + +KVCDFGL+R+ S + T + APE+
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSS---KSAAGTPEWMAPEVLRD 213
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT 226
S D++S G I E+ T
Sbjct: 214 EPSNEKS--DVYSFGVILWELAT 234
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 104/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 120
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 121 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 169
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 223
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 224 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 133/306 (43%), Gaps = 59/306 (19%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-------ILREVKLLR 77
Y I E +G G + +V + TG + A K I + S A R I REV +LR
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK---KRQSRASRRGVSREEIEREVSILR 70
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
+ H +++ + + + D+ ++ EL+ +L + + L+ E F+ Q+L
Sbjct: 71 QVLHHNVITLHDVYENRT-----DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 137 RALKYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+ Y+HT + H DLKP+NI L + N +K+ DFGLA + V + + T
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGT 181
Query: 193 RWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
+ APE+ Y P D+WSIG I +L+G F LG
Sbjct: 182 PEFVAPEIV-----NYEPLGLEADMWSIGVITYILLSGASPF---------------LGD 221
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
ET+A + + + + E F + LA +++L+ + + R T +E
Sbjct: 222 TKQETLANITS-VSYDFDEEF-----------FSHTSELAKDFIRKLLVKETRKRLTIQE 269
Query: 310 ALADPY 315
AL P+
Sbjct: 270 ALRHPW 275
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N++ + +KV DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E ++ ++ + H +F+
Sbjct: 101 FPFLVK-----------LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N++ + +KV DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 145/337 (43%), Gaps = 64/337 (18%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR-------ILREVKLLR 77
Y I E +G G + +V + TG + A K I + S A R I REV +LR
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIK---KRQSRASRRGVSREEIEREVSILR 70
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML 136
+ H +++ + + + D+ ++ EL+ +L + + L+ E F+ Q+L
Sbjct: 71 QVLHHNVITLHDVYENRT-----DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQIL 125
Query: 137 RALKYMHTANVYHRDLKPKNI-LANANC---KLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
+ Y+HT + H DLKP+NI L + N +K+ DFGLA + V + + T
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH----EIEDGVEFKNIFGT 181
Query: 193 RWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
+ APE+ Y P D+WSIG I +L+G F LG
Sbjct: 182 PEFVAPEIVN-----YEPLGLEADMWSIGVITYILLSGASPF---------------LGD 221
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
ET+A + + + + E F + LA +++L+ + + R T +E
Sbjct: 222 TKQETLANITS-VSYDFDEEF-----------FSHTSELAKDFIRKLLVKETRKRLTIQE 269
Query: 310 ALADPYFKGL----AKIEREPSCQPISKLEFEFERRR 342
AL P+ + A + RE S + ++ RRR
Sbjct: 270 ALRHPWITPVDNQQAMVRRE-SVVNLENFRKQYVRRR 305
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+G+GS+G V D TG + A+KK+ +VF + E+ L P IV +
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYG 133
Query: 90 IMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVY 148
+ RE + + EL+E L Q+IK L + ++L Q L L+Y+HT +
Sbjct: 134 AV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 188
Query: 149 HRDLKPKNILANAN-CKLKVCDFGLARVAFSDT-PMTVFWTDYV-ATRWYRAPELCGSFF 205
H D+K N+L +++ + +CDFG A D ++ DY+ T + APE+
Sbjct: 189 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV---VM 245
Query: 206 SKYTPA-IDIWSIGCIFAEVLTG 227
K A +DIWS C+ +L G
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+G+GS+G V D TG + A+KK+ +VF + E+ L P IV +
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYG 117
Query: 90 IMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVY 148
+ RE + + EL+E L Q+IK L + ++L Q L L+Y+HT +
Sbjct: 118 AV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 172
Query: 149 HRDLKPKNILANAN-CKLKVCDFGLARVAFSDT-PMTVFWTDYV-ATRWYRAPELCGSFF 205
H D+K N+L +++ + +CDFG A D ++ DY+ T + APE+
Sbjct: 173 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV---VM 229
Query: 206 SKYTPA-IDIWSIGCIFAEVLTG 227
K A +DIWS C+ +L G
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 20/231 (8%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHPDIVEIKR 89
+G+G+YGVV +G+ +A+K+I + R+L ++ + +R + P V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS-QEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 90 IMLPPSKREFKDIYVVFELMESDL----HQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
+ RE D+++ ELM++ L QVI + + +++AL+++H+
Sbjct: 74 ALF----RE-GDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 146 -NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSF 204
+V HRD+KP N+L NA ++K+CDFG++ D + + Y APE
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDI----DAGCKPYMAPERINPE 184
Query: 205 FSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPE 253
++ Y+ DIWS+G E+ + FP S + ++ PSP+
Sbjct: 185 LNQKGYSVKSDIWSLGITMIELAILR--FPYDSWGTPFQQLKQVVEEPSPQ 233
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 26 KILEVIGKGSYG-VVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K+ + +G G +G V A + HT KVA+K + + L E +++ L+H +
Sbjct: 18 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVE---AFLAEANVMKTLQHDKL 72
Query: 85 VEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKY 141
V++ ++ + IY++ E M + L +K+++ + + F Q+ + +
Sbjct: 73 VKLHAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 126
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL +A+ K+ DFGLARV D T +W APE
Sbjct: 127 IEQRNYIHRDLRAANILVSASLVCKIADFGLARV-IEDNEYTAREGAKFPIKW-TAPEAI 184
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSPET 254
F +T D+WS G + E++T G+ +PG S + + P PE
Sbjct: 185 N--FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPEN 236
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 53/297 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV-FEHISDAIRILREVKLLRLLRHPD 83
++I +GKG +G V A + ++ +A+K + E ++ REV++ LRHP+
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPN 69
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ---FFLYQMLRAL 139
I+ + F D V+ ++E + L V + L++ Q ++ ++ AL
Sbjct: 70 ILRLYGY--------FHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y H+ V HRD+KP+N+L + +LK+ DFG + A S + T Y PE
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAAL-----CGTLDYLPPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVR 259
+ + +D+WS+G + E L GKP F + I+ + T
Sbjct: 177 MIEG--RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFT---------- 224
Query: 260 NEKARKYLTEMRKKPPVPLFQKFPN-VDPLALRLLQRLIAFDPKDRPTAEEALADPY 315
FP+ V A L+ RL+ +P RP E L P+
Sbjct: 225 ----------------------FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 259
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 30 VIGKGSYGVVCAA--IDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
VIGKG +GVV ID + AIK + + E + LRE L+R L HP+++
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLNHPNVLA 86
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ IMLPP +V+ M DL Q I++ + T + F Q+ R ++Y+
Sbjct: 87 LIGIMLPPEGLP----HVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAE 142
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFS----------DTPMTVFWTDYVATRW 194
HRDL +N + + + +KV DFGLAR + V WT + +
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQT 202
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKP 229
YR +T D+WS G + E+LT G P
Sbjct: 203 YR-----------FTTKSDVWSFGVLLWELLTRGAP 227
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 94/202 (46%), Gaps = 11/202 (5%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEI 87
LE IGKGS+G V ID T + VAIK I D+ E + I +E+ +L + +
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKII-DLEEAEDEIEDIQQEITVLSQCDSSYVTKY 86
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANV 147
L SK ++++ E + + L ++L+ L Y+H+
Sbjct: 87 YGSYLKGSK-----LWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 148 YHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSK 207
HRD+K N+L + +K+ DFG+A +DT + +V T ++ APE+ S
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAG-QLTDTQIKR--NTFVGTPFWMAPEVIQQ--SA 196
Query: 208 YTPAIDIWSIGCIFAEVLTGKP 229
Y DIWS+G E+ G+P
Sbjct: 197 YDSKADIWSLGITAIELAKGEP 218
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 20/209 (9%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIK 88
EV+GKG +G TGE + +K++ E L+EVK++R L HP++++
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTF--LKEVKVMRCLEHPNVLKFI 73
Query: 89 RIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQF-FLYQMLRALKYMHTANV 147
++ + F Y+ L +IK+ D + F + + Y+H+ N+
Sbjct: 74 GVLYKDKRLNFITEYI----KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNI 129
Query: 148 YHRDLKPKNILANANCKLKVCDFGLARVAFSD-----------TPMTVFWTDYVATRWYR 196
HRDL N L N + V DFGLAR+ + P V ++
Sbjct: 130 IHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWM 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVL 225
APE+ Y +D++S G + E++
Sbjct: 190 APEMING--RSYDEKVDVFSFGIVLCEII 216
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 17/219 (7%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIK 88
E++G G +G V +T TG K+A K I + D + E+ ++ L H ++++
Sbjct: 95 EILGGGRFGQVHKCEETATGLKLAAKIIKT--RGMKDKEEVKNEISVMNQLDHANLIQ-- 150
Query: 89 RIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRALKYMHTAN 146
L + DI +V E ++ ++I + +LT F+ Q+ +++MH
Sbjct: 151 ---LYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY 207
Query: 147 VYHRDLKPKNILA-NANCK-LKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSF 204
+ H DLKP+NIL N + K +K+ DFGLAR + V + T + APE+
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNF----GTPEFLAPEVVNYD 263
Query: 205 FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLI 243
F + D+WS+G I +L+G F G + L+ I
Sbjct: 264 FVSF--PTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI 300
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 108/234 (46%), Gaps = 20/234 (8%)
Query: 26 KILEVIGKGSYG-VVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K+ + +G G +G V A + HT KVA+K + + L E +++ L+H +
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVE---AFLAEANVMKTLQHDKL 245
Query: 85 VEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKY 141
V++ ++ + IY++ E M + L +K+++ + + F Q+ + +
Sbjct: 246 VKLHAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL +A+ K+ DFGLARV D T +W APE
Sbjct: 300 IEQRNYIHRDLRAANILVSASLVCKIADFGLARV-IEDNEYTAREGAKFPIKW-TAPEAI 357
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSPET 254
F +T D+WS G + E++T G+ +PG S + + P PE
Sbjct: 358 N--FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPEN 409
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L + L S ++ ++Y+V E ++ ++ + H +F+
Sbjct: 101 FPFLTK-----------LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N++ + +KV DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 124/306 (40%), Gaps = 35/306 (11%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIK 88
+V+G+G++ V I+ T ++ A+K I HI R+ REV++L + V
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRS--RVFREVEMLYQCQGHRNVLEL 76
Query: 89 RIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANV 147
R Y+VFE M + I + + AL ++H +
Sbjct: 77 IEFFEEEDR----FYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGI 132
Query: 148 YHRDLKPKNILA---NANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW----YRAPEL 200
HRDLKP+NIL N +K+CDF L + + T + T Y APE+
Sbjct: 133 AHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEV 192
Query: 201 CGSF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAV 257
+F S Y D+WS+G I +L+G P F G+ G E
Sbjct: 193 VEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGR--------CGSDCGWDRGEACPA 244
Query: 258 VRN---EKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADP 314
+N E ++ E K + ++ A L+ +L+ D K R +A + L P
Sbjct: 245 CQNMLFESIQEGKYEFPDK-------DWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHP 297
Query: 315 YFKGLA 320
+ +G A
Sbjct: 298 WVQGCA 303
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L + L S ++ ++Y+V E ++ ++ + H +F+
Sbjct: 101 FPFLTK-----------LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N++ + +KV DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRHPDIVEIKR 89
+G+GS+G V D TG + A+KK+ +VF + E+ L P IV +
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFR--------VEELVACAGLSSPRIVPLYG 131
Query: 90 IMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVY 148
+ RE + + EL+E L Q+IK L + ++L Q L L+Y+HT +
Sbjct: 132 AV-----REGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRIL 186
Query: 149 HRDLKPKNILANAN-CKLKVCDFGLARVAFSDT-PMTVFWTDYV-ATRWYRAPELCGSFF 205
H D+K N+L +++ + +CDFG A D ++ DY+ T + APE+
Sbjct: 187 HGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV---VM 243
Query: 206 SKYTPA-IDIWSIGCIFAEVLTG 227
K A +DIWS C+ +L G
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 92
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ H +F+
Sbjct: 93 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 141
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 142 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 195
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 196 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 141/309 (45%), Gaps = 53/309 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA-IRILREVKLLRLLRHPD 83
++I++VIG+G++G V A + E++ KI + +E + A RE + +L + D
Sbjct: 76 FEIIKVIGRGAFGEV-AVVKMKNTERIYAMKILNKWEMLKRAETACFREER--DVLVNGD 132
Query: 84 IVEIKRIMLPPSKREFKDIYVVFEL-MESDLHQVI-KANDDLTREHHQFFLYQMLRALKY 141
I L + ++ +Y+V + + DL ++ K D L + +F++ +M+ A+
Sbjct: 133 CQWIT--ALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 190
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRD+KP N+L + N +++ DFG D TV + V T Y +PE+
Sbjct: 191 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG--TVQSSVAVGTPDYISPEIL 248
Query: 202 GSF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVV 258
+ KY P D WS+G E+L G+ F +S+V ET +
Sbjct: 249 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV---------------ETYGKI 293
Query: 259 RNEKARKYLTEMRKKPPVPLFQKFP----NVDPLALRLLQRLIAFDPKDRPTAEEALAD- 313
N + R FQ FP +V A L+QRLI ++R + + D
Sbjct: 294 MNHEER--------------FQ-FPSHVTDVSEEAKDLIQRLIC--SRERRLGQNGIEDF 336
Query: 314 ---PYFKGL 319
+F+GL
Sbjct: 337 KKHAFFEGL 345
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ H +F+
Sbjct: 101 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 141/309 (45%), Gaps = 53/309 (17%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA-IRILREVKLLRLLRHPD 83
++I++VIG+G++G V A + E++ KI + +E + A RE + +L + D
Sbjct: 92 FEIIKVIGRGAFGEV-AVVKMKNTERIYAMKILNKWEMLKRAETACFREER--DVLVNGD 148
Query: 84 IVEIKRIMLPPSKREFKDIYVVFEL-MESDLHQVI-KANDDLTREHHQFFLYQMLRALKY 141
I L + ++ +Y+V + + DL ++ K D L + +F++ +M+ A+
Sbjct: 149 CQWI--TALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 206
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + HRD+KP N+L + N +++ DFG D TV + V T Y +PE+
Sbjct: 207 IHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDG--TVQSSVAVGTPDYISPEIL 264
Query: 202 GSF---FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVV 258
+ KY P D WS+G E+L G+ F +S+V ET +
Sbjct: 265 QAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV---------------ETYGKI 309
Query: 259 RNEKARKYLTEMRKKPPVPLFQKFP----NVDPLALRLLQRLIAFDPKDRPTAEEALAD- 313
N + R FQ FP +V A L+QRLI ++R + + D
Sbjct: 310 MNHEER--------------FQ-FPSHVTDVSEEAKDLIQRLIC--SRERRLGQNGIEDF 352
Query: 314 ---PYFKGL 319
+F+GL
Sbjct: 353 KKHAFFEGL 361
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 36/237 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R K+ + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 77 RLLRHPDIVEIKRIMLPPSK------------------REFKDIYVVFELMESDLHQVIK 118
+ H ++V + P R ++ +V +++ DL++
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--- 142
Query: 119 ANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR +
Sbjct: 143 --DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D P V D + APE + F + YT D+WS G + E+ + G +PG
Sbjct: 201 D-PDXVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E ++ ++ H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N++ + +KV DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 30/234 (12%)
Query: 26 KILEVIGKGSYG-VVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K+ + +G G +G V A + HT KVA+K + + L E +++ L+H +
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVE---AFLAEANVMKTLQHDKL 239
Query: 85 VEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKY 141
V++ ++ + IY++ E M + L +K+++ + + F Q+ + +
Sbjct: 240 VKLHAVVTK------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 293
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL +A+ K+ DFGLARV + WT APE
Sbjct: 294 IEQRNYIHRDLRAANILVSASLVCKIADFGLARVG---AKFPIKWT---------APEAI 341
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSPET 254
F +T D+WS G + E++T G+ +PG S + + P PE
Sbjct: 342 N--FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPEN 393
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LAGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N++ + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 100/212 (47%), Gaps = 11/212 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRL-LRHP 82
+++ +++GKGS+G V A T + AIK + DV D + E ++L L HP
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
+ M + + +V+ L DL I++ F+ +++ L+++
Sbjct: 80 FLTH----MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFL 135
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+ + +RDLK NIL + + +K+ DFG+ + T ++ T Y APE+
Sbjct: 136 HSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NEFCGTPDYIAPEILL 192
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 234
KY ++D WS G + E+L G+ F G+
Sbjct: 193 G--QKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 222
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 34/236 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R K+ + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 64 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 122
Query: 77 RLLRHPDIVEIKRIMLPPSK------------------REFKDIYVVFELMESDLHQVIK 118
+ H ++V + P R ++ +V +++ DL++
Sbjct: 123 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--- 179
Query: 119 ANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR +
Sbjct: 180 --DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 237
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D + +W APE F YT D+WS G + E+ + G +PG
Sbjct: 238 DPDYVRKGDARLPLKWM-APETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 290
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 34/236 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R K+ + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 76
Query: 77 RLLRHPDIVEIKRIMLPPSK------------------REFKDIYVVFELMESDLHQVIK 118
+ H ++V + P R ++ +V +++ DL++
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--- 133
Query: 119 ANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR +
Sbjct: 134 --DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D + +W APE F YT D+WS G + E+ + G +PG
Sbjct: 192 DPDYVRKGDARLPLKWM-APETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 140/318 (44%), Gaps = 69/318 (21%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL-RLLRHPDIVEI 87
+++G GS G V + G VA+K++ F I+ L E+KLL HP+++
Sbjct: 21 KILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA-----LMEIKLLTESDDHPNVI-- 72
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKA------NDDLTREHHQF-FLYQMLRALK 140
R + F +Y+ EL +L ++++ N L +E++ L Q+ +
Sbjct: 73 -RYYCSETTDRF--LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 141 YMHTANVYHRDLKPKNILANA-------------NCKLKVCDFGLARVAFSDTPMTVFWT 187
++H+ + HRDLKP+NIL + N ++ + DFGL + D+ + F T
Sbjct: 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQSSFRT 187
Query: 188 DY---VATRWYRAPELCGSFFS-----KYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVH 238
+ T +RAPEL + + T +IDI+S+GC+F +L+ GK F G
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF-GDKYSR 246
Query: 239 QLDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIA 298
+ ++I + L EM+ L + A L+ ++I
Sbjct: 247 ESNIIRGIFS------------------LDEMKCLHDRSLIAE-------ATDLISQMID 281
Query: 299 FDPKDRPTAEEALADPYF 316
DP RPTA + L P F
Sbjct: 282 HDPLKRPTAMKVLRHPLF 299
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 34/236 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R K+ + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 77 RLLRHPDIVEIKRIMLPPSK------------------REFKDIYVVFELMESDLHQVIK 118
+ H ++V + P R ++ +V +++ DL++
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--- 142
Query: 119 ANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR +
Sbjct: 143 --DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 200
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D + +W APE F YT D+WS G + E+ + G +PG
Sbjct: 201 DPDYVRKGDARLPLKWM-APETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQ 447
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 448 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQ 499
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 558
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 559 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 601
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 602 IGRIEN----------GERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 637
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LXGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 113/237 (47%), Gaps = 36/237 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R K+ + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 76
Query: 77 RLLRHPDIVEIKRIMLPPSK------------------REFKDIYVVFELMESDLHQVIK 118
+ H ++V + P R ++ +V +++ DL++
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--- 133
Query: 119 ANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR +
Sbjct: 134 --DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 191
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D + +W APE + F + YT D+WS G + E+ + G +PG
Sbjct: 192 DPDYVRKGDARLPLKWM-APE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 131/301 (43%), Gaps = 56/301 (18%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K + +GKG++G V C + +TG VA+K++ H + D RE+++L+ L
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD---FQREIQILKALH 69
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES----DLHQVIKANDDLTREHHQFFLY--Q 134
IV+ + + P ++ + +V E + S D Q +A D +R LY Q
Sbjct: 70 SDFIVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASR----LLLYSSQ 122
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR- 193
+ + ++Y+ + HRDL +NIL + +K+ DFGLA++ D DY R
Sbjct: 123 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-------KDYYVVRE 175
Query: 194 -------WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDL 246
WY L + FS+ + D+WS G + E+ T D
Sbjct: 176 PGQSPIFWYAPESLSDNIFSRQS---DVWSFGVVLYELFT----------------YCDK 216
Query: 247 LGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLI-AFDPKDRP 305
+PS E + ++ +E+ L+ + + P P + L +L A P+DRP
Sbjct: 217 SCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRP 276
Query: 306 T 306
+
Sbjct: 277 S 277
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 86
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 87 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 136 QIVLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 189
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 190 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQ 67
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 68 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQ 119
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTXXKASKGKLPIKW 178
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 179 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 221
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 222 IGRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 257
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ ++ +G GS+G V TG A+K K+ + EH + RIL+ V
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L + L S ++ ++Y+V E ++ ++ H +F+
Sbjct: 101 FPFLTK-----------LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N++ + +KV DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N ++ L+++GKG++G V + TG A+K + +V + L E ++L+ RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + +V+ +L + + + +F+ +++ AL Y
Sbjct: 70 PFLTALKYSFQTHDRL----CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 142 MHTA-NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
+H+ NV +RDLK +N++ + + +K+ DFGL + D + T Y APE+
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEV 182
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 183 LED--NDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 101/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
++++ + +G GS+G V TG A+K K+ + EH + RI + V
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQI-EHTLNEKRIQQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E ++ ++ + H +F+
Sbjct: 101 FPFLVK-----------LEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + +KV DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 100
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 101 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 150 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 203
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 204 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 18/241 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI-LREVKLLRLLRH 81
N + + +IG+G +G V TG+ A+K + + + L E +L L+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 82 PD---IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLR 137
D IV + P K F + +LM DLH + + + +F+ +++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L++MH V +RDLKP NIL + + +++ D GLA P V T Y A
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMA 358
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSV--VHQLDLITDLLGTPSPETI 255
PE+ + Y + D +S+GC+ ++L G F H++D +T + P++
Sbjct: 359 PEVLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417
Query: 256 A 256
+
Sbjct: 418 S 418
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 107/232 (46%), Gaps = 26/232 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 96
Query: 91 --MLPPSKREFKDIYVVFELMESD--LHQVIKAN-DDLTREHHQFFLYQMLRALKYMHTA 145
+ PP Y+V E M L + + N +++T + Q+ A++Y+
Sbjct: 97 CTLEPP-------FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKK 149
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 204
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSPE 253
++ ++ D+W+ G + E+ T G +PG + DL+ PE
Sbjct: 205 --YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQPE 254
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N ++ L+++GKG++G V + TG A+K + +V + L E ++L+ RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + +V+ +L + + + +F+ +++ AL Y
Sbjct: 211 PFLTALKYSFQTHDRL----CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 266
Query: 142 MHTA-NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
+H+ NV +RDLK +N++ + + +K+ DFGL + D + T Y APE+
Sbjct: 267 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFCGTPEYLAPEV 323
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 324 LED--NDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 18/241 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI-LREVKLLRLLRH 81
N + + +IG+G +G V TG+ A+K + + + L E +L L+
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 247
Query: 82 PD---IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLR 137
D IV + P K F + +LM DLH + + + +F+ +++
Sbjct: 248 GDCPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL 302
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L++MH V +RDLKP NIL + + +++ D GLA P V T Y A
Sbjct: 303 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMA 357
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSV--VHQLDLITDLLGTPSPETI 255
PE+ + Y + D +S+GC+ ++L G F H++D +T + P++
Sbjct: 358 PEVLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 416
Query: 256 A 256
+
Sbjct: 417 S 417
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 36/222 (16%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQD-------CPKARREVELHWRASQCP 115
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T
Sbjct: 116 HIVRIVDV--------YENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIX 167
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+ S +T
Sbjct: 168 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTT----P 223
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
T +Y APE+ G KY + D WS+G I +L G P F
Sbjct: 224 CYTPYYVAPEVLGP--EKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 11/208 (5%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N ++ L+++GKG++G V + TG A+K + +V + L E ++L+ RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + +V+ +L + + + +F+ +++ AL Y
Sbjct: 208 PFLTALKYSFQTHDRL----CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 263
Query: 142 MHT-ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
+H+ NV +RDLK +N++ + + +K+ DFGL + D + T Y APE+
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KTFCGTPEYLAPEV 320
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 321 LED--NDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N ++ L+++GKG++G V + TG A+K + +V + L E ++L+ RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + F Y +L + + + +F+ +++ AL Y
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 142 MHTA-NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
+H+ NV +RDLK +N++ + + +K+ DFGL + D + T Y APE+
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEV 180
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 181 LED--NDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 11/208 (5%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
N ++ L+++GKG++G V + TG A+K + +V + L E ++L+ RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
P + +K + F Y +L + + + +F+ +++ AL Y
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYA----NGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 142 MHTA-NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
+H+ NV +RDLK +N++ + + +K+ DFGL + D + T Y APE+
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATM---KXFCGTPEYLAPEV 181
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ Y A+D W +G + E++ G+
Sbjct: 182 LED--NDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 18/239 (7%)
Query: 1 MQQDQTKKELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI---H 57
M D + L + D A ++++E++G G+YG V TG+ AIK +
Sbjct: 2 MASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG 61
Query: 58 DVFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDL 113
D E I I +L++ R + IK+ PP + +++V E +DL
Sbjct: 62 DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN--PPGMDD--QLWLVMEFCGAGSVTDL 117
Query: 114 HQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLA 173
+ K N L E + ++LR L ++H V HRD+K +N+L N ++K+ DFG++
Sbjct: 118 IKNTKGNT-LKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176
Query: 174 RVAFSDTPMTVFWTDYVATRWYRAPELCG---SFFSKYTPAIDIWSIGCIFAEVLTGKP 229
A D + T ++ T ++ APE+ + + Y D+WS+G E+ G P
Sbjct: 177 --AQLDRTVGRRNT-FIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAP 232
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 65/314 (20%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL-RLLRHPDIVEI 87
+++G GS G V + G VA+K++ F I+ L E+KLL HP+++
Sbjct: 39 KILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA-----LMEIKLLTESDDHPNVI-- 90
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKA------NDDLTREHHQF-FLYQMLRALK 140
R + F +Y+ EL +L ++++ N L +E++ L Q+ +
Sbjct: 91 -RYYCSETTDRF--LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 141 YMHTANVYHRDLKPKNILANA-------------NCKLKVCDFGLARVAFSDTPMTVFWT 187
++H+ + HRDLKP+NIL + N ++ + DFGL + D+ F
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQXXFRX 205
Query: 188 DY---VATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDL 242
+ T +RAPEL S + T +IDI+S+GC+F +L+ GK F G + ++
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF-GDKYSRESNI 264
Query: 243 ITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPK 302
I + L EM+ L + A L+ ++I DP
Sbjct: 265 IRGIFS------------------LDEMKCLHDRSLIAE-------ATDLISQMIDHDPL 299
Query: 303 DRPTAEEALADPYF 316
RPTA + L P F
Sbjct: 300 KRPTAMKVLRHPLF 313
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 65/314 (20%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL-RLLRHPDIVEI 87
+++G GS G V + G VA+K++ F I+ L E+KLL HP+++
Sbjct: 39 KILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA-----LMEIKLLTESDDHPNVI-- 90
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKA------NDDLTREHHQF-FLYQMLRALK 140
R + F +Y+ EL +L ++++ N L +E++ L Q+ +
Sbjct: 91 -RYYCSETTDRF--LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 147
Query: 141 YMHTANVYHRDLKPKNILANA-------------NCKLKVCDFGLARVAFSDTPMTVFWT 187
++H+ + HRDLKP+NIL + N ++ + DFGL + D+ F
Sbjct: 148 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQXXFRX 205
Query: 188 DY---VATRWYRAPELC-GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDL 242
+ T +RAPEL S + T +IDI+S+GC+F +L+ GK F G + ++
Sbjct: 206 NLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF-GDKYSRESNI 264
Query: 243 ITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPK 302
I + L EM+ L + A L+ ++I DP
Sbjct: 265 IRGIFS------------------LDEMKCLHDRSLIAE-------ATDLISQMIDHDPL 299
Query: 303 DRPTAEEALADPYF 316
RPTA + L P F
Sbjct: 300 KRPTAMKVLRHPLF 313
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 18/241 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI-LREVKLLRLLRH 81
N + + +IG+G +G V TG+ A+K + + + L E +L L+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 82 PD---IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLR 137
D IV + P K F + +LM DLH + + + +F+ +++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L++MH V +RDLKP NIL + + +++ D GLA P V T Y A
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMA 358
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSV--VHQLDLITDLLGTPSPETI 255
PE+ + Y + D +S+GC+ ++L G F H++D +T + P++
Sbjct: 359 PEVLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417
Query: 256 A 256
+
Sbjct: 418 S 418
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 18/241 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI-LREVKLLRLLRH 81
N + + +IG+G +G V TG+ A+K + + + L E +L L+
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST 248
Query: 82 PD---IVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLR 137
D IV + P K F + +LM DLH + + + +F+ +++
Sbjct: 249 GDCPFIVCMSYAFHTPDKLSF-----ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIIL 303
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L++MH V +RDLKP NIL + + +++ D GLA P V T Y A
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHAS-----VGTHGYMA 358
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSV--VHQLDLITDLLGTPSPETI 255
PE+ + Y + D +S+GC+ ++L G F H++D +T + P++
Sbjct: 359 PEVLQKGVA-YDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 417
Query: 256 A 256
+
Sbjct: 418 S 418
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + +++ + Q+ A++Y+
Sbjct: 78 CTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 185
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 186 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + +++ + Q+ A++Y+
Sbjct: 78 CTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 185
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 186 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQ 67
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 68 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 119
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 178
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 179 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 221
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 222 IGRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 257
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 14 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 70
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 71 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 122
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 123 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 181
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 182 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 224
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 225 IGRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 260
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 94
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ H +F+
Sbjct: 95 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 144 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 197
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 198 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 69
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 70 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 121
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 122 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 180
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 181 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 223
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 224 IGRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 259
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 64
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 65 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 116
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 117 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 175
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 176 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 218
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 219 IGRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 254
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 105/213 (49%), Gaps = 25/213 (11%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K + +GKG++G V C + +TG VA+K++ H + D RE+++L+ L
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD---FQREIQILKALH 66
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES----DLHQVIKANDDLTREHHQFFLY--Q 134
IV+ + + P + E + +V E + S D Q +A D +R LY Q
Sbjct: 67 SDFIVKYRGVSYGPGRPELR---LVMEYLPSGCLRDFLQRHRARLDASR----LLLYSSQ 119
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ + ++Y+ + HRDL +NIL + +K+ DFGLA++ D V + +
Sbjct: 120 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF 179
Query: 195 YRAPE-LCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ APE L + FS+ + D+WS G + E+ T
Sbjct: 180 WYAPESLSDNIFSRQS---DVWSFGVVLYELFT 209
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 15 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 70
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 71 LYAVV------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 124
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 125 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 180
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 181 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 230
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 113/237 (47%), Gaps = 36/237 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R K+ + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 27 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 77 RLLRHPDIVEIKRIMLPPSK------------------REFKDIYVVFELMESDLHQVIK 118
+ H ++V + P R ++ +V +++ DL++
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--- 142
Query: 119 ANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR
Sbjct: 143 --DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D P V D + APE + F + YT D+WS G + E+ + G +PG
Sbjct: 201 D-PDXVRKGDARLPLKWMAPE---TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 19 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 75 LYAVV------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEWTARQGAKFPIKW-TAPE--AA 184
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 72
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 73 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 124
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 125 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 183
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 184 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 226
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 227 IGRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 262
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 95
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 96 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 147
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 148 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 206
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 207 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 249
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 250 IGRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 285
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 34/236 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R K+ + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 76
Query: 77 RLLRHPDIVEIKRIMLPPSK------------------REFKDIYVVFELMESDLHQVIK 118
+ H ++V + P R ++ +V +++ DL++
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--- 133
Query: 119 ANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR
Sbjct: 134 --DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D P V D + APE F YT D+WS G + E+ + G +PG
Sbjct: 192 D-PDXVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 34/236 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R K+ + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 18 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 76
Query: 77 RLLRHPDIVEIKRIMLPPSK------------------REFKDIYVVFELMESDLHQVIK 118
+ H ++V + P R ++ +V +++ DL++
Sbjct: 77 HIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK--- 133
Query: 119 ANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR
Sbjct: 134 --DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 191
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D P V D + APE F YT D+WS G + E+ + G +PG
Sbjct: 192 D-PDXVRKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 244
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 78 LYAVV------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAKFPIKW-TAPE--AA 187
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N++ + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIIIS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 103/230 (44%), Gaps = 16/230 (6%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPD 83
+ I+ +GKG +G V A + +A+K + E ++ RE+++ LRHP+
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
I+ + + K IY++ E +L++ ++ + + F+ ++ AL Y
Sbjct: 76 ILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 130
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H V HRD+KP+N+L +LK+ DFG + A S + T Y PE+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIE 185
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF--PGKSVVHQLDLITDLLGTP 250
+ +D+W G + E L G P F P + H+ + DL P
Sbjct: 186 G--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 233
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 100/229 (43%), Gaps = 38/229 (16%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTG-----EKVAIKKIHDVFEHISDAIRILREVKL 75
D + ++ IG G +G+V H G +KVAIK I + D I E ++
Sbjct: 6 DPSELTFVQEIGSGQFGLV------HLGYWLNKDKVAIKTIREGAMSEEDFIE---EAEV 56
Query: 76 LRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQM 135
+ L HP +V++ + L E I +V E ME H + D R F +
Sbjct: 57 MMKLSHPKLVQLYGVCL-----EQAPICLVTEFME---HGCLS---DYLRTQRGLFAAET 105
Query: 136 L--------RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
L + Y+ A V HRDL +N L N +KV DFG+ R D + T
Sbjct: 106 LLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGT 165
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +W +PE+ FS+Y+ D+WS G + EV + GK + +S
Sbjct: 166 KF-PVKW-ASPEVFS--FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 120
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ H +F+
Sbjct: 121 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 169
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 170 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 223
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 224 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 104/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 66
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E ME DL I L E + F +Q
Sbjct: 67 KVS-SGFSGVIRLL---DWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 177
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 178 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 19 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 74
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 75 LYAVV------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVE 128
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 129 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 184
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 185 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 234
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 121/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC---TSDSVREKFLQEALTMRQ 67
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 68 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKYSLDLA--SLILYAYQ 119
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L ++N +K+ DFGL+R D+ + +W
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 178
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 179 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 221
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 222 IGRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 257
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + +++ + Q+ A++Y+
Sbjct: 83 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 135
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 190
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 191 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 110/236 (46%), Gaps = 34/236 (14%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R K+ + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 87
Query: 77 RLLRHPDIVEIKRIMLPPSK------------------REFKDIYVVFELMESDLHQVIK 118
+ H ++V + P R ++ +V ++ DL++
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK--- 144
Query: 119 ANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR +
Sbjct: 145 --DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 202
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D + +W APE F YT D+WS G + E+ + G +PG
Sbjct: 203 DPDYVRKGDARLPLKWM-APETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 255
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y APE+ S Y A+D W++G + ++ G P F
Sbjct: 203 EYLAPEIILS--KGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 78 LYAVV------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 187
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + +++ + Q+ A++Y+
Sbjct: 78 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 185
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 186 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRL--LRHPDIVEIK 88
+G+GS+G V D TG + A+KK+ + + R +L+ L P IV +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 89 RIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANV 147
+ RE + + EL+E L Q++K L + ++L Q L L+Y+H+ +
Sbjct: 152 GAV-----REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 206
Query: 148 YHRDLKPKNILANANCK-LKVCDFGLARVAFSDT-PMTVFWTDYV-ATRWYRAPELCGSF 204
H D+K N+L +++ +CDFG A D ++ DY+ T + APE+
Sbjct: 207 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVV--L 264
Query: 205 FSKYTPAIDIWSIGCIFAEVLTG 227
+D+WS C+ +L G
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQ 447
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 448 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQ 499
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L +A +K+ DFGL+R D+ + +W
Sbjct: 500 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 558
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 559 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 601
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 602 IGRIEN----------GERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 637
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + +++ + Q+ A++Y+
Sbjct: 78 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 130
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 185
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 186 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + ++ + Q+ A++Y+
Sbjct: 83 CTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 190
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 191 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 130/301 (43%), Gaps = 56/301 (18%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K + +GKG++G V C + +TG VA+K++ H + D RE+++L+ L
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD---FQREIQILKALH 82
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES----DLHQVIKANDDLTREHHQFFLY--Q 134
IV+ + + P ++ + +V E + S D Q +A D +R LY Q
Sbjct: 83 SDFIVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASR----LLLYSSQ 135
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR- 193
+ + ++Y+ + HRDL +NIL + +K+ DFGLA++ D DY R
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-------KDYYVVRE 188
Query: 194 -------WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDL 246
WY L + FS+ + D+WS G + E+ T D
Sbjct: 189 PGQSPIFWYAPESLSDNIFSRQS---DVWSFGVVLYELFT----------------YCDK 229
Query: 247 LGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLI-AFDPKDRP 305
+PS E + ++ E+ L+ + + P P + L +L A P+DRP
Sbjct: 230 SCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRP 289
Query: 306 T 306
+
Sbjct: 290 S 290
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 39/220 (17%)
Query: 26 KILEVIGKGSYGVV--CA--AIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLR 80
K + +GKG++G V C + +TG VA+K++ H + D RE+++L+ L
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRD---FQREIQILKALH 70
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMES----DLHQVIKANDDLTREHHQFFLY--Q 134
IV+ + + P ++ + +V E + S D Q +A D +R LY Q
Sbjct: 71 SDFIVKYRGVSYGPGRQSLR---LVMEYLPSGCLRDFLQRHRARLDASR----LLLYSSQ 123
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR- 193
+ + ++Y+ + HRDL +NIL + +K+ DFGLA++ D DY R
Sbjct: 124 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD-------KDYYVVRE 176
Query: 194 -------WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
WY L + FS+ + D+WS G + E+ T
Sbjct: 177 PGQSPIFWYAPESLSDNIFSRQS---DVWSFGVVLYELFT 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 91 ML--PPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQ-----FFLYQMLRALKYMH 143
PP Y++ E M ++ + R+ + Q+ A++Y+
Sbjct: 79 CTREPP-------FYIIIEFM--TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL +N L N +KV DFGL+R+ DT T +W APE
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-XTAHAGAKFPIKW-TAPESLA- 186
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 187 -YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 226
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRL-LRHPDIVE 86
+++GKGS+G V A T + AIK + DV D + E ++L L HP +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 87 IKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTAN 146
M + + +V+ L DL I++ F+ +++ L+++H+
Sbjct: 83 ----MFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKG 138
Query: 147 VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFS 206
+ +RDLK NIL + + +K+ DFG+ + T + T Y APE+
Sbjct: 139 IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKT---NXFCGTPDYIAPEILLG--Q 193
Query: 207 KYTPAIDIWSIGCIFAEVLTGKPLFPGK 234
KY ++D WS G + E+L G+ F G+
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 91 ML--PPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQ-----FFLYQMLRALKYMH 143
PP Y++ E M ++ + R+ + Q+ A++Y+
Sbjct: 83 CTREPP-------FYIITEFM--TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPEL 200
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPES 188
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 189 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 90
Query: 91 ML--PPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQ-----FFLYQMLRALKYMH 143
PP Y++ E M ++ + R+ + Q+ A++Y+
Sbjct: 91 CTREPP-------FYIITEFM--TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 141
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPEL 200
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 142 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPES 196
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 197 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 238
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + +++ + Q+ A++Y+
Sbjct: 76 CTREPP-------FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
N HRDL +N L N +KV DFGL+R+ DT T +W APE +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-XTAHAGAKFPIKW-TAPESLA--Y 184
Query: 206 SKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+K++ D+W+ G + E+ T G +PG
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 91 ML--PPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQ-----FFLYQMLRALKYMH 143
PP Y++ E M ++ + R+ + Q+ A++Y+
Sbjct: 80 CTREPP-------FYIITEFM--TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPEL 200
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPES 185
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 186 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 244 LYAVVSE------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 353
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 403
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 244 LYAVV------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 353
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 403
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 188 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 243
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 244 LYAVVSE------EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 298 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 353
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 354 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 403
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 271 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 326
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 327 LYAVV------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 380
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 381 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 436
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 437 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 486
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 13 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 68
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 69 LYAVV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 122
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 123 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 178
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 179 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 228
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + +++ + Q+ A++Y+
Sbjct: 76 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
N HRDL +N L N +KV DFGL+R+ DT T +W APE +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-FTAHAGAKFPIKW-TAPESLA--Y 184
Query: 206 SKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+K++ D+W+ G + E+ T G +PG
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 78 LYAVV------SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 187
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + ++ + Q+ A++Y+
Sbjct: 78 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 185
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 186 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 87 IKRIMLPPSKREFKDIYVVFELMESD-LHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M L +K Q Q+ + Y+
Sbjct: 78 LYAVV------SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 187
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 102/224 (45%), Gaps = 30/224 (13%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 91 ML--PPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQ-----FFLYQMLRALKYMH 143
PP Y++ E M ++ + R+ + Q+ A++Y+
Sbjct: 80 CTREPP-------FYIITEFM--TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPEL 200
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPES 185
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 186 LA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 11 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 66
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 67 LYAVV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 120
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 121 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 176
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 177 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 226
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + ++ + Q+ A++Y+
Sbjct: 83 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 135
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 190
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 191 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHI--SDAIRILREVKLLRLL 79
A Y++++VIG+G++G V + + KV K+ FE I SD+ E ++
Sbjct: 73 AEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRAL 139
P +V+ L + ++ + +Y+V E M + +N D+ + +F+ +++ AL
Sbjct: 132 NSPWVVQ-----LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+H+ HRD+KP N+L + + LK+ DFG + V V T Y +PE
Sbjct: 187 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM--NKEGMVRCDTAVGTPDYISPE 244
Query: 200 LCGSFFSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+ S Y D WS+G E+L G F S+V
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 81
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + ++ + Q+ A++Y+
Sbjct: 82 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 134
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 189
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 190 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 229
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 78 LYAVV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 187
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 102/220 (46%), Gaps = 12/220 (5%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHI--SDAIRILREVKLLRLL 79
A Y++++VIG+G++G V + + KV K+ FE I SD+ E ++
Sbjct: 68 AEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 126
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRAL 139
P +V++ ++ + +Y+V E M + +N D+ + +F+ +++ AL
Sbjct: 127 NSPWVVQLFYAF-----QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 181
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+H+ HRD+KP N+L + + LK+ DFG + V V T Y +PE
Sbjct: 182 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM--NKEGMVRCDTAVGTPDYISPE 239
Query: 200 LCGSFFSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+ S Y D WS+G E+L G F S+V
Sbjct: 240 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 279
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHI--SDAIRILREVKLLRLL 79
A Y++++VIG+G++G V + + KV K+ FE I SD+ E ++
Sbjct: 73 AEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA 131
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRAL 139
P +V+ L + ++ + +Y+V E M + +N D+ + +F+ +++ AL
Sbjct: 132 NSPWVVQ-----LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+H+ HRD+KP N+L + + LK+ DFG + V V T Y +PE
Sbjct: 187 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM--NKEGMVRCDTAVGTPDYISPE 244
Query: 200 LCGSFFSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+ S Y D WS+G E+L G F S+V
Sbjct: 245 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 120/291 (41%), Gaps = 53/291 (18%)
Query: 24 RYKILEVIGKGSYGVVCAAI---DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRL 78
R ++ IG+G +G V I + VAIK + SD++R L+E +R
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC---TSDSVREKFLQEALTMRQ 67
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELME----SDLHQVIKANDDLTREHHQFFLYQ 134
HP IV++ ++ ++++ EL QV K + DL + YQ
Sbjct: 68 FDHPHIVKLIGVITE------NPVWIIMELCTLGELRSFLQVRKFSLDLA--SLILYAYQ 119
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ AL Y+ + HRD+ +N+L +A +K+ DFGL+R D+ + +W
Sbjct: 120 LSTALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRY-MEDSTYYKASKGKLPIKW 178
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPET 254
APE F ++T A D+W G E+L + + G + +
Sbjct: 179 M-APESIN--FRRFTSASDVWMFGVCMWEIL--------------MHGVKPFQGVKNNDV 221
Query: 255 IAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRP 305
I + N ++ P+P PN P L+ + A+DP RP
Sbjct: 222 IGRIENG----------ERLPMP-----PNCPPTLYSLMTKCWAYDPSRRP 257
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 104/222 (46%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 77
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + ++ + Q+ A++Y+
Sbjct: 78 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK 130
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HRDL +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 185
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 186 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 225
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 106/219 (48%), Gaps = 25/219 (11%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
K+L+ IGKG +G V + + G KVA+K I ++ + A L E ++ LRH ++V
Sbjct: 24 KLLQTIGKGEFGDV--MLGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 77
Query: 86 EIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDD--LTREHHQFFLYQMLRALKYM 142
++ +++ E +Y+V E M + L +++ L + F + A++Y+
Sbjct: 78 QLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
N HRDL +N+L + + KV DFGL + A S T + +W APE
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKW-TAPEALR 187
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GK---PLFPGKSVV 237
K++ D+WS G + E+ + G+ P P K VV
Sbjct: 188 E--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
K+L+ IGKG +G V + + G KVA+K I ++ + A L E ++ LRH ++V
Sbjct: 196 KLLQTIGKGEFGDV--MLGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 249
Query: 86 EIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDD--LTREHHQFFLYQMLRALKYM 142
++ +++ E +Y+V E M + L +++ L + F + A++Y+
Sbjct: 250 QLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
N HRDL +N+L + + KV DFGL + A S T + +W APE
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKW-TAPEALR 359
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GK---PLFPGKSVVHQLD 241
K++ D+WS G + E+ + G+ P P K VV +++
Sbjct: 360 E--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE 400
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y AP + S Y A+D W++G + E+ G P F
Sbjct: 203 EYLAPAIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 25/223 (11%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
K+L+ IGKG +G V + + G KVA+K I ++ + A L E ++ LRH ++V
Sbjct: 9 KLLQTIGKGEFGDV--MLGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 62
Query: 86 EIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDD--LTREHHQFFLYQMLRALKYM 142
++ +++ E +Y+V E M + L +++ L + F + A++Y+
Sbjct: 63 QLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
N HRDL +N+L + + KV DFGL + A S T + +W APE
Sbjct: 119 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKW-TAPEALR 172
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GK---PLFPGKSVVHQLD 241
K++ D+WS G + E+ + G+ P P K VV +++
Sbjct: 173 E--KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 16/230 (6%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPD 83
+ I +GKG +G V A + +A+K + E ++ RE+++ LRHP+
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 75
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
I+ + + K IY++ E +L++ ++ + + F+ ++ AL Y
Sbjct: 76 ILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 130
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H V HRD+KP+N+L +LK+ DFG + A S + T Y PE+
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIE 185
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF--PGKSVVHQLDLITDLLGTP 250
+ +D+W G + E L G P F P + H+ + DL P
Sbjct: 186 G--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 233
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 20/225 (8%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
K+++ +G G +G V ++ KVA+K + + L E L++ L+H +V
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNS-TKVAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLV 71
Query: 86 EIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYM 142
+ ++ RE + IY++ E M + L +K+++ + F Q+ + Y+
Sbjct: 72 RLYAVV----TRE-EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 126
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
N HRDL+ N+L + + K+ DFGLARV D T +W APE
Sbjct: 127 ERKNYIHRDLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKW-TAPEAIN 184
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDL 246
F +T D+WS G + E++T GK +PG++ D++T L
Sbjct: 185 --FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT---NADVMTAL 224
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 16/230 (6%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI-HDVFEHISDAIRILREVKLLRLLRHPD 83
+ I +GKG +G V A + +A+K + E ++ RE+++ LRHP+
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPN 76
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
I+ + + K IY++ E +L++ ++ + + F+ ++ AL Y
Sbjct: 77 ILRMYNYF-----HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 131
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H V HRD+KP+N+L +LK+ DFG + A S + T Y PE+
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS-----LRRRXMCGTLDYLPPEMIE 186
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF--PGKSVVHQLDLITDLLGTP 250
+ +D+W G + E L G P F P + H+ + DL P
Sbjct: 187 G--KTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP 234
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 82
Query: 91 ML--PPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQ-----FFLYQMLRALKYMH 143
PP Y++ E M ++ + R+ + Q+ A++Y+
Sbjct: 83 CTREPP-------FYIITEFM--TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 133
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL +N L N +KV DFGL+R+ DT T +W APE
Sbjct: 134 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-XTAHAGAKFPIKW-TAPESLA- 190
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 191 -YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 230
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 138/318 (43%), Gaps = 69/318 (21%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL-RLLRHPDIVEI 87
+++G GS G V + G VA+K++ F I+ L E+KLL HP+++
Sbjct: 21 KILGYGSSGTVVFQ-GSFQGRPVAVKRMLIDFCDIA-----LMEIKLLTESDDHPNVI-- 72
Query: 88 KRIMLPPSKREFKDIYVVFELMESDLHQVIKA------NDDLTREHHQF-FLYQMLRALK 140
R + F +Y+ EL +L ++++ N L +E++ L Q+ +
Sbjct: 73 -RYYCSETTDRF--LYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVA 129
Query: 141 YMHTANVYHRDLKPKNILANA-------------NCKLKVCDFGLARVAFSDTPMTVFWT 187
++H+ + HRDLKP+NIL + N ++ + DFGL + D+ F
Sbjct: 130 HLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKL--DSGQXXFRX 187
Query: 188 DY---VATRWYRAPELCGSFFS-----KYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVH 238
+ T +RAPEL + + T +IDI+S+GC+F +L+ GK F G
Sbjct: 188 NLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF-GDKYSR 246
Query: 239 QLDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIA 298
+ ++I + L EM+ L + A L+ ++I
Sbjct: 247 ESNIIRGIFS------------------LDEMKCLHDRSLIAE-------ATDLISQMID 281
Query: 299 FDPKDRPTAEEALADPYF 316
DP RPTA + L P F
Sbjct: 282 HDPLKRPTAMKVLRHPLF 299
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 22/203 (10%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRL--LRHPDIVEIK 88
+G+GS+G V D TG + A+KK+ + + R +L+ L P IV +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 89 RIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANV 147
+ RE + + EL+E L Q++K L + ++L Q L L+Y+H+ +
Sbjct: 133 GAV-----REGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRI 187
Query: 148 YHRDLKPKNILANANCK-LKVCDFGLARVAFSDT-PMTVFWTDYV-ATRWYRAPELCGSF 204
H D+K N+L +++ +CDFG A D + DY+ T + APE+
Sbjct: 188 LHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVV--L 245
Query: 205 FSKYTPAIDIWSIGCIFAEVLTG 227
+D+WS C+ +L G
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 87 IKRIMLPPSKREFKDIYVVFELMESD-LHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M L +K Q Q+ + Y+
Sbjct: 78 LYAVV------SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 187
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ +RH +V+
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKIRHEKLVQ 77
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 78 LYAVV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 132 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 187
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 127/303 (41%), Gaps = 42/303 (13%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRH 81
A K L IG+G+YG V + +G+ +A+K+I + ++ ++R
Sbjct: 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDC 80
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIK-----ANDDLTREHHQFFLYQML 136
P IV+ + RE D ++ ELM + + K +D + E +
Sbjct: 81 PYIVQFYGALF----RE-GDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATV 135
Query: 137 RALKYM-HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
+AL ++ + HRD+KP NIL + + +K+CDFG++ ++ T R Y
Sbjct: 136 KALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD----SIAKTRDAGCRPY 191
Query: 196 RAPELCGSFFSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPE 253
APE S+ Y D+WS+G E+ TG+ +P + V D +T ++ P+
Sbjct: 192 MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSV--FDQLTQVVKGDPPQ 249
Query: 254 TIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALAD 313
+ N + R++ P F F N+ + D RP +E L
Sbjct: 250 ----LSNSEEREF---------SPSFINFVNL----------CLTKDESKRPKYKELLKH 286
Query: 314 PYF 316
P+
Sbjct: 287 PFI 289
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 16/226 (7%)
Query: 16 FTEYGDANRYKI-----LEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRI 69
F G+ +R K+ L V+GKGS+G V + T E A+K + DV D
Sbjct: 8 FDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT 67
Query: 70 LREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHH 128
+ E ++L L P + L + +Y V E + DL I+ H
Sbjct: 68 MVEKRVLALPGKPPFL----TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA 123
Query: 129 QFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTD 188
F+ ++ L ++ + + +RDLK N++ ++ +K+ DFG+ + D T
Sbjct: 124 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT---KX 180
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 234
+ T Y APE+ + Y ++D W+ G + E+L G+ F G+
Sbjct: 181 FCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 224
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 22 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 77
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 78 LYAVV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 131
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL NIL N KV DFGLAR+ D T +W APE +
Sbjct: 132 RMNYVHRDLAAANILVGENLVCKVADFGLARL-IEDNEYTARQGAKFPIKW-TAPE--AA 187
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 237
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 78
Query: 91 ML--PPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQ-----FFLYQMLRALKYMH 143
PP Y++ E M ++ + R+ + Q+ A++Y+
Sbjct: 79 CTREPP-------FYIITEFM--TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 129
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL +N L N +KV DFGL+R+ DT + +W APE
Sbjct: 130 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF-PIKW-TAPESLA- 186
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 187 -YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 226
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK--------KIHDVFEHISDAIRILREVK 74
+++ ++ +G GS+G V +G A+K K+ + EH + RIL+ V
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQAVN 99
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFE-LMESDLHQVIKANDDLTREHHQFFLY 133
L++ L S ++ ++Y+V E + ++ ++ + H +F+
Sbjct: 100 FPFLVK-----------LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q++ +Y+H+ ++ +RDLKP+N+L + ++V DFG A+ T W T
Sbjct: 149 QIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-----WX-LCGTP 202
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
APE+ S Y A+D W++G + E+ G P F
Sbjct: 203 EALAPEIILS--KGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 108/223 (48%), Gaps = 25/223 (11%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
K+L+ IGKG +G V + + G KVA+K I ++ + A L E ++ LRH ++V
Sbjct: 15 KLLQTIGKGEFGDV--MLGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 68
Query: 86 EIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDD--LTREHHQFFLYQMLRALKYM 142
++ +++ E +Y+V E M + L +++ L + F + A++Y+
Sbjct: 69 QLLGVIV----EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
N HRDL +N+L + + KV DFGL + A S T + +W L
Sbjct: 125 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQD-----TGKLPVKWTAPEALRE 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GK---PLFPGKSVVHQLD 241
+ FS + D+WS G + E+ + G+ P P K VV +++
Sbjct: 180 AAFSTKS---DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE 219
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIK 88
E IG+G++G V + VA+K + A + L+E ++L+ HP+IV +
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLI 178
Query: 89 RIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML----RALKYMH 143
+ + + IY+V EL++ D ++ R L QM+ ++Y+
Sbjct: 179 GVCT-----QKQPIYIVMELVQGGDFLTFLRTEGARLRVKT---LLQMVGDAAAGMEYLE 230
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRDL +N L LK+ DFG++R V +W APE
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-TAPEALN- 288
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
+ +Y+ D+WS G + E + L +P P + N++
Sbjct: 289 -YGRYSSESDVWSFGILLWETFS-------------------LGASPYPN----LSNQQT 324
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLAL-RLLQRLIAFDPKDRPT 306
R+++ + + P P + P A+ RL+++ A++P RP+
Sbjct: 325 REFVEKGGRLP-------CPELCPDAVFRLMEQCWAYEPGQRPS 361
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 17/214 (7%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
K+++ +G G +G V ++ KVA+K + + L E L++ L+H +V
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNS-TKVAVKTLKPGTMSVQ---AFLEEANLMKTLQHDKLV 70
Query: 86 EIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYM 142
+ ++ +K E IY++ E M + L +K+++ + F Q+ + Y+
Sbjct: 71 RLYAVV---TKEE--PIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYI 125
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
N HRDL+ N+L + + K+ DFGLARV D T +W APE
Sbjct: 126 ERKNYIHRDLRAANVLVSESLMCKIADFGLARV-IEDNEYTAREGAKFPIKW-TAPEAIN 183
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
F +T ++WS G + E++T GK +PG++
Sbjct: 184 --FGCFTIKSNVWSFGILLYEIVTYGKIPYPGRT 215
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 99/221 (44%), Gaps = 24/221 (10%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 79
Query: 91 ML--PPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQ-----FFLYQMLRALKYMH 143
PP Y++ E M ++ + R+ + Q+ A++Y+
Sbjct: 80 CTREPP-------FYIITEFM--TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE 130
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL +N L N +KV DFGL+R+ DT + +W APE
Sbjct: 131 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKF-PIKW-TAPESLA- 187
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 188 -YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 227
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 22/229 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R K+ + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 29 DRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH-SEHRALMSELKILI 87
Query: 77 RLLRHPDIVEIKRIMLPPSKR-----EFKDIYVVFELMESDLHQVIKAN------DDLTR 125
+ H ++V + P EF + + S ++ + D LT
Sbjct: 88 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTL 147
Query: 126 EHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR D P V
Sbjct: 148 EHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD-PDXVR 206
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D + APE F YT D+WS G + E+ + G +PG
Sbjct: 207 KGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 105/222 (47%), Gaps = 26/222 (11%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 284
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + +++ + Q+ A++Y+
Sbjct: 285 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 337
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCG 202
N HR+L +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPESLA 392
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 393 --YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 432
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 98/209 (46%), Gaps = 20/209 (9%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G +G V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 75
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKAND--DLTREHHQFFLYQMLRALKYMHTA 145
PP Y++ E M +L ++ + +++ + Q+ A++Y+
Sbjct: 76 CTREPP-------FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK 128
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
N HRDL +N L N +KV DFGL+R+ DT T +W APE +
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-XTAHAGAKFPIKW-TAPESLA--Y 184
Query: 206 SKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+K++ D+W+ G + E+ T G +PG
Sbjct: 185 NKFSIKSDVWAFGVLLWEIATYGMSPYPG 213
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 32/225 (14%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 281
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ-----FFLYQMLRALKYM 142
PP Y++ E M +L ++ + R+ + Q+ A++Y+
Sbjct: 282 CTREPP-------FYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPE 199
N HR+L +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 332 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPE 386
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 387 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 429
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 67
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 68 KVSS-GFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 178
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 179 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 39/265 (14%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV------FEHISDAIRILREVKLLRLLRHP 82
+V+G G G V TG+K A+K ++D +H A V +L + +
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDV--YE 92
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDD--LTREHHQFFLYQMLRAL 139
++ KR +L ++ E ME +L I+ D T + + A+
Sbjct: 93 NMHHGKRCLL-----------IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 141
Query: 140 KYMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+++H+ N+ HRD+KP+N+L + K LK+ DFG A+ + T +T Y Y
Sbjct: 142 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YV 196
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF---PGKSVVHQLDLITDL--LGTPS 251
APE+ G KY + D+WS+G I +L G P F G+++ + L G P+
Sbjct: 197 APEVLGP--EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 254
Query: 252 PETIAVVRNEKARKYLTEMRKKPPV 276
PE V +E A++ + + K P
Sbjct: 255 PEWSEV--SEDAKQLIRLLLKTDPT 277
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 107/230 (46%), Gaps = 20/230 (8%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R + + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 77 RLLRHPDIVEIKRIMLPPSKR-----EFKDIYVVFELMESDLHQVIKAND----DLTREH 127
+ H ++V + P EF + + S ++ + D LT EH
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
+ +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR + D
Sbjct: 146 LICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD 205
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+ +W APE F YT D+WS G + E+ + G +PG +
Sbjct: 206 ARLPLKWM-APETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI 252
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 39/265 (14%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDV------FEHISDAIRILREVKLLRLLRHP 82
+V+G G G V TG+K A+K ++D +H A V +L + +
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDV--YE 73
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDD--LTREHHQFFLYQMLRAL 139
++ KR +L ++ E ME +L I+ D T + + A+
Sbjct: 74 NMHHGKRCLL-----------IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAI 122
Query: 140 KYMHTANVYHRDLKPKNILANANCK---LKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+++H+ N+ HRD+KP+N+L + K LK+ DFG A+ + T +T Y Y
Sbjct: 123 QFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY-----YV 177
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF---PGKSVVHQLDLITDL--LGTPS 251
APE+ G KY + D+WS+G I +L G P F G+++ + L G P+
Sbjct: 178 APEVLGP--EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPN 235
Query: 252 PETIAVVRNEKARKYLTEMRKKPPV 276
PE V +E A++ + + K P
Sbjct: 236 PEWSEV--SEDAKQLIRLLLKTDPT 258
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 82
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 83 KVSS-GFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 193
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 194 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 101
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 102 KVSS-GFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 157
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 212
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 213 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 99/230 (43%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + L+E ++++ LRH +V+
Sbjct: 12 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP---GTMSPEAFLQEAQVMKKLRHEKLVQ 67
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + I +V E M + L +K Q Q+ + Y+
Sbjct: 68 LYAVV------SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGLAR+ D T +W APE +
Sbjct: 122 RMNYVHRDLRAANILVGENLVCKVADFGLARL-IEDNEXTARQGAKFPIKW-TAPE--AA 177
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 178 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 227
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 89
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 90 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 145
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 200
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 201 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 100/226 (44%), Gaps = 16/226 (7%)
Query: 16 FTEYGDANRYKI-----LEVIGKGSYGVVCAAIDTHTGEKVAIKKIH-DVFEHISDAIRI 69
F G+ +R K+ L V+GKGS+G V + T E A+K + DV D
Sbjct: 329 FDNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECT 388
Query: 70 LREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHH 128
+ E ++L L P + L + +Y V E + DL I+ H
Sbjct: 389 MVEKRVLALPGKPPFL----TQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA 444
Query: 129 QFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTD 188
F+ ++ L ++ + + +RDLK N++ ++ +K+ DFG+ + D T
Sbjct: 445 VFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT---KX 501
Query: 189 YVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGK 234
+ T Y APE+ + Y ++D W+ G + E+L G+ F G+
Sbjct: 502 FCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQAPFEGE 545
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 66
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 67 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 122
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 177
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 178 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 82
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 83 KVSS-GFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 193
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 194 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 48/284 (16%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIK 88
E IG+G++G V + VA+K + A + L+E ++L+ HP+IV +
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKA-KFLQEARILKQYSHPNIVRLI 178
Query: 89 RIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQML----RALKYMH 143
+ + + IY+V EL++ D ++ R L QM+ ++Y+
Sbjct: 179 GVCT-----QKQPIYIVMELVQGGDFLTFLRTEGARLRVKT---LLQMVGDAAAGMEYLE 230
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRDL +N L LK+ DFG++R V +W APE
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW-TAPEALN- 288
Query: 204 FFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKA 263
+ +Y+ D+WS G + E + L +P P + N++
Sbjct: 289 -YGRYSSESDVWSFGILLWETFS-------------------LGASPYPN----LSNQQT 324
Query: 264 RKYLTEMRKKPPVPLFQKFPNVDPLAL-RLLQRLIAFDPKDRPT 306
R+++ + + P P + P A+ RL+++ A++P RP+
Sbjct: 325 REFVEKGGRLP-------CPELCPDAVFRLMEQCWAYEPGQRPS 361
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 81
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 82 KVSS-GFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 137
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 192
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 193 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 82
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 83 KVSS-GFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 138
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 139 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 193
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 194 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 81
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 82 KVSS-GFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 137
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 192
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 193 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 94
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 95 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 205
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 206 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 107/231 (46%), Gaps = 20/231 (8%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHPDIVEIKR 89
+G+G+YGVV +G+ A+K+I + R+L ++ + R + P V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS-QEQKRLLXDLDISXRTVDCPFTVTFYG 100
Query: 90 IMLPPSKREFKDIYVVFELMESDL----HQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
+ RE D+++ EL ++ L QVI + + +++AL+++H+
Sbjct: 101 ALF----RE-GDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 155
Query: 146 -NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSF 204
+V HRD+KP N+L NA ++K CDFG++ D + + Y APE
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDI----DAGCKPYXAPERINPE 211
Query: 205 FSK--YTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPE 253
++ Y+ DIWS+G E+ + FP S + ++ PSP+
Sbjct: 212 LNQKGYSVKSDIWSLGITXIELAILR--FPYDSWGTPFQQLKQVVEEPSPQ 260
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 95
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 96 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 206
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 207 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEH-ISDAIRILREVKLLRLLRHPD 83
++I+ +G G++G V A + TG A K I E + D I E+++L HP
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV---EIEILATCDHPY 77
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDD--LTREHHQFFLYQMLRALKY 141
IV++ K ++++ E I D LT Q QML AL +
Sbjct: 78 IVKLLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNF 132
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+ + HRDLK N+L +++ DFG V+ + ++ T ++ APE+
Sbjct: 133 LHSKRIIHRDLKAGNVLMTLEGDIRLADFG---VSAKNLKTLQKRDSFIGTPYWMAPEVV 189
Query: 202 GSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
K TP DIWS+G E+ +P
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEMAQIEP 220
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 109
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 110 KVSS-GFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 165
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 220
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 221 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 114
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 115 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 170
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 171 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 225
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 226 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 94
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 95 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 205
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 206 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 67
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 68 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 178
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 179 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRL 76
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 77 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 131 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKW-TAPEAI 188
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 189 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 221
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 95
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 96 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 206
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 207 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEH-ISDAIRILREVKLLRLLRHPD 83
++I+ +G G++G V A + TG A K I E + D I E+++L HP
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV---EIEILATCDHPY 69
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDD--LTREHHQFFLYQMLRALKY 141
IV++ K ++++ E I D LT Q QML AL +
Sbjct: 70 IVKLLGAYYHDGK-----LWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNF 124
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H+ + HRDLK N+L +++ DFG V+ + ++ T ++ APE+
Sbjct: 125 LHSKRIIHRDLKAGNVLMTLEGDIRLADFG---VSAKNLKTLQKRDSFIGTPYWMAPEVV 181
Query: 202 GSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
K TP DIWS+G E+ +P
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEMAQIEP 212
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 95
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 96 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 206
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 207 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 95
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 96 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 151
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 152 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 206
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 207 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 94
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 95 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 205
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 206 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 94
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 95 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 150
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 151 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 205
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 206 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 109
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 110 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 165
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 166 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 220
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 221 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA---IRILREVKLLRLLRHP 82
K ++V+G G++G V I GE V I + + + + E ++ + HP
Sbjct: 18 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHP 77
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRALK 140
+V + + L P+ I +V +LM L V + D++ + + Q+ + +
Sbjct: 78 HLVRLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMM 131
Query: 141 YMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
Y+ + HRDL +N+L + +K+ DFGLAR+ D + +W L
Sbjct: 132 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM---AL 188
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLT--GKP 229
+ K+T D+WS G E++T GKP
Sbjct: 189 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 219
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 67
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 68 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 123
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 178
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 179 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 19/230 (8%)
Query: 28 LEV-IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
LEV +G+G +G V T +VAIK + ++S L+E ++++ LRH +V+
Sbjct: 189 LEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKP--GNMSPEA-FLQEAQVMKKLRHEKLVQ 244
Query: 87 IKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKYMH 143
+ ++ + IY+V E M + L +K Q Q+ + Y+
Sbjct: 245 LYAVV------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE 298
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
N HRDL+ NIL N KV DFGL R+ D T +W APE +
Sbjct: 299 RMNYVHRDLRAANILVGENLVCKVADFGLGRL-IEDNEYTARQGAKFPIKW-TAPE--AA 354
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSP 252
+ ++T D+WS G + E+ T G+ +PG LD + P P
Sbjct: 355 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 404
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 104/225 (46%), Gaps = 32/225 (14%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
+G G YG V + VA+K + E + L+E +++ ++HP++V++ +
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLK---EDTMEVEEFLKEAAVMKEIKHPNLVQLLGV 323
Query: 91 ML--PPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHHQ-----FFLYQMLRALKYM 142
PP Y++ E M +L ++ + R+ + Q+ A++Y+
Sbjct: 324 CTREPP-------FYIITEFMTYGNLLDYLR---ECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPE 199
N HR+L +N L N +KV DFGL+R+ DT +T + ++ + APE
Sbjct: 374 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-----YTAHAGAKFPIKWTAPE 428
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
++K++ D+W+ G + E+ T G +PG + +L+
Sbjct: 429 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL 471
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 24 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRL 78
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 79 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 132
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 133 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKW-TAPEAI 190
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 191 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 223
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 25 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRL 79
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 80 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 133
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 134 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKW-TAPEAI 191
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 192 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 224
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDA---IRILREVKLLRLLRHP 82
K ++V+G G++G V I GE V I + + + + E ++ + HP
Sbjct: 41 KRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHP 100
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRALK 140
+V + + L P+ I +V +LM L V + D++ + + Q+ + +
Sbjct: 101 HLVRLLGVCLSPT------IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMM 154
Query: 141 YMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
Y+ + HRDL +N+L + +K+ DFGLAR+ D + +W L
Sbjct: 155 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWM---AL 211
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLT--GKP 229
+ K+T D+WS G E++T GKP
Sbjct: 212 ECIHYRKFTHQSDVWSYGVTIWELMTFGGKP 242
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRL 70
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 71 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKW-TAPEAI 182
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 183 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 17/205 (8%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRLLRHPDIVEIK 88
+G+G +GVV +T VA+KK+ + + ++ ++ +E+K++ +H ++VE
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE-- 94
Query: 89 RIMLPPSKREFKDIYVVFELMES----DLHQVIKANDDLTREHHQFFLYQMLRALKYMHT 144
L + D+ +V+ M + D + L+ + ++H
Sbjct: 95 ---LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSF 204
+ HRD+K NIL + K+ DFGLAR A TV + V T Y APE +
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTVMXSRIVGTTAYMAPE---AL 207
Query: 205 FSKYTPAIDIWSIGCIFAEVLTGKP 229
+ TP DI+S G + E++TG P
Sbjct: 208 RGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 26 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRL 80
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 81 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 134
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 135 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKW-TAPEAI 192
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 193 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 225
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 18 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRL 72
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 73 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 126
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 127 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKW-TAPEAI 184
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 185 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 217
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 65
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 66 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 121
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 176
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 177 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 62
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 63 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 173
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 174 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 21 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRL 75
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 76 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 129
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 130 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKW-TAPEAI 187
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 188 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 220
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 22 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRL 76
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 77 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 130
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 131 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKW-TAPEAI 188
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 189 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 221
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 11 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQ-GSMSPDAF--LAEANLMKQLQHQRL 65
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 66 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 119
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 120 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKW-TAPEAI 177
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 178 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 17 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQ-GSMSPDAF--LAEANLMKQLQHQRL 71
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 72 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 125
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 126 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKW-TAPEAI 183
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 184 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 216
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 62
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 63 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 173
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 174 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 20/214 (9%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK-----KIHDVFEHISDAIRILREVKLLR 77
++Y++ ++G G +G V + I VAIK +I D E + + R+ EV LL+
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-LPNGTRVPMEVVLLK 62
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYV-VFELME--SDLHQVIKANDDLTREHHQFFLYQ 134
+ + R++ E D +V + E E DL I L E + F +Q
Sbjct: 63 KVS-SGFSGVIRLL---DWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQ 118
Query: 135 MLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
+L A+++ H V HRD+K +NIL + N +LK+ DFG + DT +TD+ TR
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG-SGALLKDT----VYTDFDGTR 173
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
Y PE + + + +WS+G + +++ G
Sbjct: 174 VYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 20/241 (8%)
Query: 26 KILEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++++ +G G +G V + T G KVAIK + L E ++++ L+H +
Sbjct: 12 QLIKRLGNGQFGEVW--MGTWNGNTKVAIKTLKP---GTMSPESFLEEAQIMKKLKHDKL 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQF--FLYQMLRALKY 141
V++ ++ + IY+V E M + L +K + + Q+ + Y
Sbjct: 67 VQLYAVV------SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAY 120
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL K+ DFGLAR+ D T +W APE
Sbjct: 121 IERMNYIHRDLRSANILVGNGLICKIADFGLARL-IEDNEXTARQGAKFPIKW-TAPE-- 176
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLLGTPSPETIAVVRN 260
+ + ++T D+WS G + E++T G+ +PG + L+ + P P+ + +
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLH 236
Query: 261 E 261
E
Sbjct: 237 E 237
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRL 70
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 71 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEXTAREGAKFPIKW-TAPEAI 182
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 183 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 16 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQG-SMSPDAF--LAEANLMKQLQHQRL 70
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 71 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKW-TAPEAI 182
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 183 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 93
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +KY+ +
Sbjct: 94 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 211 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 17/205 (8%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRLLRHPDIVEIK 88
+G+G +GVV +T VA+KK+ + + ++ ++ +E+K++ +H ++VE
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE-- 94
Query: 89 RIMLPPSKREFKDIYVVFELMES----DLHQVIKANDDLTREHHQFFLYQMLRALKYMHT 144
L + D+ +V+ M + D + L+ + ++H
Sbjct: 95 ---LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSF 204
+ HRD+K NIL + K+ DFGLAR A TV V T Y APE +
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQTVMXXRIVGTTAYMAPE---AL 207
Query: 205 FSKYTPAIDIWSIGCIFAEVLTGKP 229
+ TP DI+S G + E++TG P
Sbjct: 208 RGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 124/290 (42%), Gaps = 48/290 (16%)
Query: 29 EVIGKGSYGVVCAAI-----DTHTGEKVAIKKIHDVFEHISDAIRILREVKLL-RLLRHP 82
+V+G G++G V A T +VA+K + + + S+ ++ E+K++ +L H
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADS-SEREALMSELKMMTQLGSHE 109
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFEL---------------------MESDLHQVIKAND 121
+IV + IY++FE +E + + ++ +
Sbjct: 110 NIVNLLGACTLSGP-----IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEE 164
Query: 122 DL---TREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
DL T E F YQ+ + ++++ + HRDL +N+L +K+CDFGLAR S
Sbjct: 165 DLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSV- 236
D+ V + +W APE F YT D+WS G + E+ + G +PG V
Sbjct: 225 DSNYVVRGNARLPVKW-MAPE--SLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVD 281
Query: 237 VHQLDLITDLLGTPSP----ETIAVVRNEKARKYLTEMRKKPPVPLFQKF 282
+ LI + P E I ++ + + RK+P P F
Sbjct: 282 ANFYKLIQNGFKMDQPFYATEEIYIIMQ---SCWAFDSRKRPSFPNLTSF 328
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL--RLLRHP 82
+ +L VIG+GSY V T A+K + + + I ++ K + + HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
+V + + E + +V+ + DL ++ L EH +F+ ++ AL Y+
Sbjct: 71 FLVGLHSCF----QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H + +RDLK N+L ++ +K+ D+G+ + T + + T Y APE+
Sbjct: 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILR 183
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y ++D W++G + E++ G+ F
Sbjct: 184 G--EDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 127/318 (39%), Gaps = 64/318 (20%)
Query: 11 KDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHD----VFEHISDA 66
KD++ F Y++ ++GKG +G V A +VAIK I + +SD+
Sbjct: 24 KDREAFEA-----EYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDS 78
Query: 67 IRILREVKLLRLLR----HPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDD 122
+ EV LL + HP ++ + +E + + L DL I
Sbjct: 79 VTCPLEVALLWKVGAGGGHPGVIRLLDWF---ETQEGFMLVLERPLPAQDLFDYITEKGP 135
Query: 123 LTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANA--NCKLKVCDFGLARVAFSDT 180
L + F Q++ A+++ H+ V HRD+K +NIL + C K+ DFG + D
Sbjct: 136 LGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCA-KLIDFG-SGALLHDE 193
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL 240
P +TD+ TR Y PE PA +WS+G + +++ G F + +
Sbjct: 194 P----YTDFDGTRVYSPPEWISRHQYHALPAT-VWSLGILLYDMVCGDIPFERDQEILEA 248
Query: 241 DLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFP-NVDPLALRLLQRLIAF 299
+L FP +V P L++R +A
Sbjct: 249 EL--------------------------------------HFPAHVSPDCCALIRRCLAP 270
Query: 300 DPKDRPTAEEALADPYFK 317
P RP+ EE L DP+ +
Sbjct: 271 KPSSRPSLEEILLDPWMQ 288
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL--RLLRHP 82
+ +L VIG+GSY V T A+K + + + I ++ K + + HP
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
+V + + E + +V+ + DL ++ L EH +F+ ++ AL Y+
Sbjct: 67 FLVGLHSCF----QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 122
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H + +RDLK N+L ++ +K+ D+G+ + T + + T Y APE+
Sbjct: 123 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILR 179
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y ++D W++G + E++ G+ F
Sbjct: 180 G--EDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 94
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +KY+ +
Sbjct: 95 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLL 247
K+T D+WS G + E++T G P +P V+ D+ LL
Sbjct: 212 ---QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL 251
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 112
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +KY+ +
Sbjct: 113 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 169
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 230 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 257
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 23/230 (10%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R + + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 28 DRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH-SEHRALMSELKILI 86
Query: 77 RLLRHPDIVEIKRIMLPPSKR-----EFKDIYVVFELMESDLHQVI--KANDDL-----T 124
+ H ++V + P EF + + S ++ + K +DL T
Sbjct: 87 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLT 146
Query: 125 REHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR D P V
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKD-PDXV 205
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
D + APE F YT D+WS G + E+ + G +PG
Sbjct: 206 RKGDARLPLKWMAPETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 253
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 17/226 (7%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 86
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +KY+ +
Sbjct: 87 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 143
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDLL 247
K+T D+WS G + E++T G P +P V+ D+ LL
Sbjct: 204 ---QKFTTKSDVWSFGVLLWELMTRGAPPYPD---VNTFDITVYLL 243
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 21/223 (9%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
D Y ++ +G+G + V H G A+K+I + D RE + RL
Sbjct: 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI--LCHEQQDREEAQREADMHRLFN 84
Query: 81 HPDIVEIKRIMLP--PSKREFKDIYVVFE--LMESDLHQVIKANDDLTREHHQFFLYQML 136
HP+I+ + L +K E + F+ + +++ ++ + LT + + L +
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFG---LARVAFSDTPMTVFWTDYVATR 193
R L+ +H HRDLKP NIL + + D G A + + + D+ A R
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR 204
Query: 194 W---YRAPELCGSFFSKYTPAI-----DIWSIGCIFAEVLTGK 228
YRAPEL FS + + D+WS+GC+ ++ G+
Sbjct: 205 CTISYRAPEL----FSVQSHCVIDERTDVWSLGCVLYAMMFGE 243
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 113
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +KY+ +
Sbjct: 114 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 170
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 231 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 258
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL--RLLRHP 82
+ +L VIG+GSY V T A+K + + + I ++ K + + HP
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
+V + + E + +V+ + DL ++ L EH +F+ ++ AL Y+
Sbjct: 82 FLVGLHSCF----QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 137
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H + +RDLK N+L ++ +K+ D+G+ + T + + T Y APE+
Sbjct: 138 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT---SXFCGTPNYIAPEILR 194
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y ++D W++G + E++ G+ F
Sbjct: 195 G--EDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 93
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +KY+ +
Sbjct: 94 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 150
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 211 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 238
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G +G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 12 KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQ-GSMSPDAF--LAEANLMKQLQHQRL 66
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 67 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 120
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HR+L+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 121 IEERNYIHRNLRAANILVSDTLSCKIADFGLARL-IEDNEYTAREGAKFPIKW-TAPEAI 178
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 179 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 211
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 20/215 (9%)
Query: 26 KILEVIGKGSYGVVCAAI-DTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
K++E +G G G V + HT KVA+K + DA L E L++ L+H +
Sbjct: 16 KLVERLGAGQAGEVWMGYYNGHT--KVAVKSLKQ-GSMSPDAF--LAEANLMKQLQHQRL 70
Query: 85 VEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFF--LYQMLRALKY 141
V + ++ + IY++ E ME+ L +K + ++ Q+ + +
Sbjct: 71 VRLYAVVTQ------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAF 124
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+ N HRDL+ NIL + K+ DFGLAR+ D T +W APE
Sbjct: 125 IEERNYIHRDLRAANILVSDTLSCKIADFGLARL-IEDAEXTAREGAKFPIKW-TAPEAI 182
Query: 202 GSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKS 235
+ +T D+WS G + E++T G+ +PG +
Sbjct: 183 N--YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 94
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +KY+ +
Sbjct: 95 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 151
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 212 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 91
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +KY+ +
Sbjct: 92 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 148
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 209 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 92
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +KY+ +
Sbjct: 93 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 149
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 210 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 89
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +KY+ +
Sbjct: 90 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLAS 146
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 207 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 234
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 101/219 (46%), Gaps = 25/219 (11%)
Query: 24 RYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR-HP 82
R ++ V+ +G + V A D +G + A+K++ E + AI ++EV ++ L HP
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAI--IQEVCFMKKLSGHP 86
Query: 83 DIVEI---KRIMLPPSKREFKDIYVVFELMESDLHQVIK---ANDDLTREHHQFFLYQML 136
+IV+ I S + ++ EL + L + +K + L+ + YQ
Sbjct: 87 NIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTC 146
Query: 137 RALKYMHTAN--VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVA--- 191
RA+++MH + HRDLK +N+L + +K+CDFG A S P + A
Sbjct: 147 RAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSA-TTISHYPDYSWSAQRRALVE 205
Query: 192 -------TRWYRAPELCGSFFSKY--TPAIDIWSIGCIF 221
T YR PE+ +S + DIW++GCI
Sbjct: 206 EEITRNTTPMYRTPEII-DLYSNFPIGEKQDIWALGCIL 243
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 148/355 (41%), Gaps = 70/355 (19%)
Query: 22 ANRYKILEVIGKGSYGVV---CAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRL 78
+N +KI + IG+G++ V A + EK+A+K + S IRI E++ L +
Sbjct: 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTV 75
Query: 79 LRHPD-IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR 137
D ++ +K K+ +VV + + + + L+ + + ++ + +
Sbjct: 76 AGGQDNVMGVKYCFR-------KNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFK 128
Query: 138 ALKYMHTANVYHRDLKPKNILANANC-KLKVCDFGLA---------------------RV 175
ALK +H + HRD+KP N L N K + DFGLA R
Sbjct: 129 ALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERC 188
Query: 176 AFSDTPMTVFWTDYVATR----WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PL 230
+ + + + VA R +RAPE+ ++ T AID+WS G IF +L+G+ P
Sbjct: 189 SQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQ-TTAIDMWSAGVIFLSLLSGRYPF 247
Query: 231 FPGKSVVHQLDLITDLLGTPSPETIAVVRN-------------EKARKYLTEMRK----- 272
+ + L I + G S ETI + + RK +R
Sbjct: 248 YKASDDLTALAQIMTIRG--SRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSST 305
Query: 273 -------KPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFKGLA 320
+ + + V A LL +L+ +P R TAEEAL P+FK ++
Sbjct: 306 PKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 97/211 (45%), Gaps = 15/211 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL--RLLRHP 82
+ +L VIG+GSY V T A++ + + + I ++ K + + HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
+V + + E + +V+ + DL ++ L EH +F+ ++ AL Y+
Sbjct: 114 FLVGLHSCF----QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 169
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAF--SDTPMTVFWTDYVATRWYRAPEL 200
H + +RDLK N+L ++ +K+ D+G+ + DT T + T Y APE+
Sbjct: 170 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTST-----FCGTPNYIAPEI 224
Query: 201 CGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
Y ++D W++G + E++ G+ F
Sbjct: 225 LRG--EDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 99/217 (45%), Gaps = 33/217 (15%)
Query: 31 IGKGSYG-VVCAAIDTHTGEK----VAIKKIHDVFEHISDAIR--ILREVKLLRLLRHPD 83
+G+G++G V A E+ VA+K + D SD R RE +LL L+H
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA----SDNARKDFHREAELLTNLQHEH 76
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKAND-------------DLTREHHQ 129
IV+ + + E + +VFE M+ DL++ ++A+ +LT+
Sbjct: 77 IVKFYGVCV-----EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQML 131
Query: 130 FFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDY 189
Q+ + Y+ + + HRDL +N L N +K+ DFG++R +S V
Sbjct: 132 HIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTM 191
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ RW PE + K+T D+WS+G + E+ T
Sbjct: 192 LPIRWM-PPE--SIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 145/345 (42%), Gaps = 69/345 (20%)
Query: 23 NRYKILEVIGKGSYG--VVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLR 80
N + ++ +G G++G ++C ID + A+K + ++ ++ A +I E +L+ ++
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNK--KYYAVKVVRNIKKYTRSA-KI--EADILKKIQ 89
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKAND--DLTREHHQFFLYQMLRA 138
+ DI + + + ++FE + L+++I N+ E + + ++L+A
Sbjct: 90 NDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKA 149
Query: 139 LKYMHTANVYHRDLKPKNILAN-------------------------ANCKLKVCDFGLA 173
L Y+ ++ H DLKP+NIL + + +K+ DFG A
Sbjct: 150 LNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCA 209
Query: 174 RVAFSDTPMTVFWTDY----VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKP 229
F +DY + TR YRAPE+ + + + D+WS GC+ AE+ TG
Sbjct: 210 ----------TFKSDYHGSIINTRQYRAPEVILNL--GWDVSSDMWSFGCVLAELYTGSL 257
Query: 230 LFPGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLT--EMRKKPP------------ 275
LF + L ++ ++ + KY+ E++ P
Sbjct: 258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHV 317
Query: 276 ---VPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEALADPYFK 317
+PL++ + L L ++ DP RP+ E L + +
Sbjct: 318 KKCLPLYKIIKH--ELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 23 NRYKILEVIGKGSYGVVCAA----ID-THTGEKVAIKKIHDVFEHISDAIRILREVKLL- 76
+R + + +G+G++G V A ID T T VA+K + + H S+ ++ E+K+L
Sbjct: 27 DRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATH-SEHRALMSELKILI 85
Query: 77 RLLRHPDIVEIKRIMLPPSKR-----EFKDIYVVFELMESDLHQVIKAND----DLTREH 127
+ H ++V + P EF + + S ++ + D LT EH
Sbjct: 86 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEH 145
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
+ +Q+ + ++++ + HRDL +NIL + +K+ DFGLAR + D
Sbjct: 146 LIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD 205
Query: 188 DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ + G +PG
Sbjct: 206 ARLPLKWM-APETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 249
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 93/205 (45%), Gaps = 17/205 (8%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRLLRHPDIVEIK 88
+G+G +GVV +T VA+KK+ + + ++ ++ +E+K++ +H ++VE
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE-- 88
Query: 89 RIMLPPSKREFKDIYVVFELMES----DLHQVIKANDDLTREHHQFFLYQMLRALKYMHT 144
L + D+ +V+ M + D + L+ + ++H
Sbjct: 89 ---LLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 145
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSF 204
+ HRD+K NIL + K+ DFGLAR A V V T Y APE +
Sbjct: 146 NHHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXVMXXRIVGTTAYMAPE---AL 201
Query: 205 FSKYTPAIDIWSIGCIFAEVLTGKP 229
+ TP DI+S G + E++TG P
Sbjct: 202 RGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 124/307 (40%), Gaps = 49/307 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI-LREVKLLRLLRH 81
N ++ V+GKG +G VCA TG+ A KK+ + L E ++L +
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 82 PDIVEIKRIMLPPSKREFKD-IYVVFELMESD---LHQVIKANDDLTREHHQFFLYQMLR 137
+V + E KD + +V LM H F+ ++
Sbjct: 244 RFVVSLAYAY------ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L+ +H + +RDLKP+NIL + + +++ D GLA P V T Y A
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA----VHVPEGQTIKGRVGTVGYMA 353
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAV 257
PE+ + +YT + D W++GC+ E++ G+ +P +
Sbjct: 354 PEVVKN--ERYTFSPDWWALGCLLYEMIAGQ--------------------SPFQQRKKK 391
Query: 258 VRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDR-----PTAEEALA 312
++ E+ + + E+ P ++F P A L +L+ DP +R +A E
Sbjct: 392 IKREEVERLVKEV----PEEYSERF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444
Query: 313 DPYFKGL 319
P FK L
Sbjct: 445 HPLFKKL 451
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 124/307 (40%), Gaps = 49/307 (15%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI-LREVKLLRLLRH 81
N ++ V+GKG +G VCA TG+ A KK+ + L E ++L +
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 82 PDIVEIKRIMLPPSKREFKD-IYVVFELMESD---LHQVIKANDDLTREHHQFFLYQMLR 137
+V + E KD + +V LM H F+ ++
Sbjct: 244 RFVVSLAYAY------ETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRA 197
L+ +H + +RDLKP+NIL + + +++ D GLA P V T Y A
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLA----VHVPEGQTIKGRVGTVGYMA 353
Query: 198 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETIAV 257
PE+ + +YT + D W++GC+ E++ G+ +P +
Sbjct: 354 PEVVKN--ERYTFSPDWWALGCLLYEMIAGQ--------------------SPFQQRKKK 391
Query: 258 VRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDR-----PTAEEALA 312
++ E+ + + E+ P ++F P A L +L+ DP +R +A E
Sbjct: 392 IKREEVERLVKEV----PEEYSERF---SPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444
Query: 313 DPYFKGL 319
P FK L
Sbjct: 445 HPLFKKL 451
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 2 QQDQTKKELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFE 61
Q + ++L +DF ++I+ +G G++G V A + T A K I E
Sbjct: 25 QYEHVTRDLNPEDF---------WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE 75
Query: 62 HISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVI--KA 119
+ + E+ +L HP+IV++ + +++++ E + +
Sbjct: 76 EELEDYMV--EIDILASCDHPNIVKLLDAFYYEN-----NLWILIEFCAGGAVDAVMLEL 128
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
LT Q Q L AL Y+H + HRDLK NIL + +K+ DFG V+ +
Sbjct: 129 ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKN 185
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
T ++ T ++ APE+ SK P D+WS+G E+ +P
Sbjct: 186 TRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 2 QQDQTKKELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFE 61
Q + ++L +DF ++I+ +G G++G V A + T A K I E
Sbjct: 25 QYEHVTRDLNPEDF---------WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE 75
Query: 62 HISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVI--KA 119
+ + E+ +L HP+IV++ + +++++ E + +
Sbjct: 76 EELEDYMV--EIDILASCDHPNIVKLLDAFYYEN-----NLWILIEFCAGGAVDAVMLEL 128
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
LT Q Q L AL Y+H + HRDLK NIL + +K+ DFG V+ +
Sbjct: 129 ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKN 185
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
T ++ T ++ APE+ SK P D+WS+G E+ +P
Sbjct: 186 TRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 100/233 (42%), Gaps = 24/233 (10%)
Query: 2 QQDQTKKELKDKDFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFE 61
Q + ++L +DF ++I+ +G G++G V A + T A K I E
Sbjct: 25 QYEHVTRDLNPEDF---------WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE 75
Query: 62 HISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVI--KA 119
+ + E+ +L HP+IV++ + +++++ E + +
Sbjct: 76 EELEDYMV--EIDILASCDHPNIVKLLDAFYYEN-----NLWILIEFCAGGAVDAVMLEL 128
Query: 120 NDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD 179
LT Q Q L AL Y+H + HRDLK NIL + +K+ DFG V+ +
Sbjct: 129 ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKN 185
Query: 180 TPMTVFWTDYVATRWYRAPELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
T ++ T ++ APE+ SK P D+WS+G E+ +P
Sbjct: 186 TRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 238
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 49/208 (23%)
Query: 125 REH----HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSD- 179
REH H F Q+ A++++H+ + HRDLKP NI + +KV DFGL D
Sbjct: 161 REHGVCLHIFI--QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 218
Query: 180 ------TPMTVFWT--DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
TPM + T V T+ Y +PE + Y+ +DI+S+G I E+ L+
Sbjct: 219 EEQTVLTPMPAYATHXGQVGTKLYMSPEQIHG--NNYSHKVDIFSLGLILFEL-----LY 271
Query: 232 PGKSVVHQLDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALR 291
+ + ++ +ITD VRN K P+ QK+P
Sbjct: 272 SFSTQMERVRIITD------------VRNLKF-----------PLLFTQKYPQ----EHM 304
Query: 292 LLQRLIAFDPKDRPTAEEALADPYFKGL 319
++Q +++ P +RP A + + + F+ L
Sbjct: 305 MVQDMLSPSPTERPEATDIIENAIFENL 332
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
++ ++ +G+G +GVV A + AIK+I ++ +++REVK L L HP I
Sbjct: 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELARE-KVMREVKALAKLEHPGI 66
Query: 85 VEIKRIML--PPSK--REFKDIYV 104
V L PP K E +I++
Sbjct: 67 VRYFNAWLETPPEKWQEEMDEIWL 90
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 153
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +K++ +
Sbjct: 154 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 210
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 271 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 298
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 94
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +K++ +
Sbjct: 95 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 212 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 95
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +K++ +
Sbjct: 96 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 213 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 8 KELKDKDFFTEYGDANRYKILEV-IGKGSYGVVCAAIDTHTGEK--VAIKKIHDVFEHIS 64
+ELKDK F + + I ++ +G G++G V + ++ VAIK + E +
Sbjct: 323 EELKDKKLFLK---RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK-A 378
Query: 65 DAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD-LHQ-VIKANDD 122
D ++RE +++ L +P IV + + + + + +V E+ LH+ ++ ++
Sbjct: 379 DTEEMMREAQIMHQLDNPYIVRLIGVC------QAEALMLVMEMAGGGPLHKFLVGKREE 432
Query: 123 LTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPM 182
+ + L+Q+ +KY+ N HR+L +N+L K+ DFGL++ +D
Sbjct: 433 IPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD--- 489
Query: 183 TVFWTDYVATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
++T A +W + APE F K++ D+WS G E L+
Sbjct: 490 DSYYTARSAGKWPLKWYAPECIN--FRKFSSRSDVWSYGVTMWEALS 534
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 99
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +K++ +
Sbjct: 100 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 156
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 217 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 244
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 92
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +K++ +
Sbjct: 93 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 149
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 210 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 94
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +K++ +
Sbjct: 95 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 151
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR + +V + +W L
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 212 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 239
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 88/218 (40%), Gaps = 14/218 (6%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL-RLLRHPD 83
++ L +G GSYG V G A+K+ F D R L EV ++ +HP
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPC 118
Query: 84 IVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYM 142
V +++ + E +Y+ EL L Q +A L +L L AL ++
Sbjct: 119 CVRLEQ-----AWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHL 173
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H+ + H D+KP NI + K+ DFGL + V D Y APEL
Sbjct: 174 HSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR----YMAPEL-- 227
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQL 240
Y A D++S+G EV L G QL
Sbjct: 228 -LQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 121 DDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR + D
Sbjct: 195 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 254
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ + G +PG
Sbjct: 255 DYVRKGDARLPLKWM-APETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 305
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 121 DDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR + D
Sbjct: 193 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 252
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ + G +PG
Sbjct: 253 DYVRKGDARLPLKWM-APETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 303
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 121 DDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR + D
Sbjct: 188 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 247
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ + G +PG
Sbjct: 248 DYVRKGDARLPLKWM-APETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 298
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 29 EVIGKGSYGVVC-AAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
EVIG+G +G V + + G+K+ A+K ++ + + I + + L E +++ HP+++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITD-IGEVSQFLTEGIIMKDFSHPNVL 95
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKA-NDDLTREHHQFFLYQMLRALKYMHT 144
+ I L + E + V+ + DL I+ + T + F Q+ + +K++ +
Sbjct: 96 SLLGICL---RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 152
Query: 145 ANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF--WTDYVATRWYRAPELCG 202
HRDL +N + + +KV DFGLAR +V + +W L
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT-GKPLFP 232
K+T D+WS G + E++T G P +P
Sbjct: 213 ---QKFTTKSDVWSFGVLLWELMTRGAPPYP 240
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 4/114 (3%)
Query: 121 DDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDT 180
D LT EH + +Q+ + ++++ + HRDL +NIL + +K+CDFGLAR + D
Sbjct: 186 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP 245
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ + G +PG
Sbjct: 246 DYVRKGDARLPLKWM-APETI--FDRVYTIQSDVWSFGVLLWEIFSLGASPYPG 296
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 123 LTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPM 182
+T E + +Q+ R ++++ + HRDL +NIL + N +K+CDFGLAR + +
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDY 255
Query: 183 TVFWTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEV--LTGKPLFPG 233
+ +W APE S F K Y+ D+WS G + E+ L G P +PG
Sbjct: 256 VRKGDTRLPLKWM-APE---SIFDKIYSTKSDVWSYGVLLWEIFSLGGSP-YPG 304
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH--DVFEHISDAIRILREVKLL-RLLRH 81
Y IL+ IG G V ++ + AIK ++ + D+ R E+ L +L +H
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQH 86
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
D K I L + + IY+V E DL+ +K + + + ML A+
Sbjct: 87 SD----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + H DLKP N L + LK+ DFG+A DT +V V T Y PE
Sbjct: 143 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAI 200
Query: 202 ---------GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
G SK +P D+WS+GCI + GK P + +++Q+ + ++ P+
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNH 257
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALR-LLQRLIAFDPKDRPTAEEAL 311
E +FP++ L+ +L+ + DPK R + E L
Sbjct: 258 EI--------------------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
Query: 312 ADPYFK 317
A PY +
Sbjct: 292 AHPYVQ 297
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 149/372 (40%), Gaps = 89/372 (23%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
RY ++ +G G + V + D + VA+K + EH ++ L E++LL+ +R+
Sbjct: 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETA--LDEIRLLKSVRNS 93
Query: 83 DIVEIKRIMLPPSKREFK-------DIYVVFELMESDL-HQVIKAN-DDLTREHHQFFLY 133
D + R M+ +FK I +VFE++ L +IK+N L + +
Sbjct: 94 DPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQ 153
Query: 134 QMLRALKYMHT-ANVYHRDLKPKNILANAN------------------------------ 162
Q+L+ L Y+HT + H D+KP+NIL + N
Sbjct: 154 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 213
Query: 163 -------------------CKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LCG 202
K+K+ D G A +T+ + TR YR+ E L G
Sbjct: 214 PATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK------HFTEDIQTRQYRSLEVLIG 267
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF---PGKSVVHQLD---LITDLLGTPSPETIA 256
S ++ TPA DIWS C+ E+ TG LF G+ D LI +LLG + I
Sbjct: 268 SGYN--TPA-DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIV 324
Query: 257 VVRNEKA----RKYLTEMRKKPPVPLFQ------KFPNVDPLALR-LLQRLIAFDPKDRP 305
+ K + L + K P LF+ ++ + L ++ P+ R
Sbjct: 325 AGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRA 384
Query: 306 TAEEALADPYFK 317
TA E L P+
Sbjct: 385 TAAECLRHPWLN 396
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Query: 14 DFFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIK---KIHDVFEHISDAIRIL 70
D T + + ++I +GKG +G V A + + VA+K K E + +R
Sbjct: 14 DILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR-- 71
Query: 71 REVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDDLTREHHQ 129
RE+++ L HP+I+ + + + IY++ E +L++ ++ + +
Sbjct: 72 REIEIQAHLHHPNILRLYNYFY-----DRRRIYLILEYAPRGELYKELQKSCTFDEQRTA 126
Query: 130 FFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ ++ AL Y H V HRD+KP+N+L +LK+ DFG + A S T+
Sbjct: 127 TIMEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTM----- 181
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKS 235
T Y PE+ + +D+W IG + E+L G P F S
Sbjct: 182 CGTLDYLPPEMIEGRM--HNEKVDLWCIGVLCYELLVGNPPFESAS 225
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH--DVFEHISDAIRILREVKLL-RLLRH 81
Y IL+ IG G V ++ + AIK ++ + D+ R E+ L +L +H
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQH 67
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
D K I L + + IY+V E DL+ +K + + + ML A+
Sbjct: 68 SD----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 123
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + H DLKP N L + LK+ DFG+A DT +V V T Y PE
Sbjct: 124 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAI 181
Query: 202 ---------GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
G SK +P D+WS+GCI + GK P + +++Q+ + ++ P+
Sbjct: 182 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNH 238
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALR-LLQRLIAFDPKDRPTAEEAL 311
E +FP++ L+ +L+ + DPK R + E L
Sbjct: 239 EI--------------------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
Query: 312 ADPYFK 317
A PY +
Sbjct: 273 AHPYVQ 278
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH--DVFEHISDAIRILREVKLL-RLLRH 81
Y IL+ IG G V ++ + AIK ++ + D+ R E+ L +L +H
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQH 66
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
D K I L + + IY+V E DL+ +K + + + ML A+
Sbjct: 67 SD----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 122
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + H DLKP N L + LK+ DFG+A DT +V V T Y PE
Sbjct: 123 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAI 180
Query: 202 ---------GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
G SK +P D+WS+GCI + GK P + +++Q+ + ++ P+
Sbjct: 181 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNH 237
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALR-LLQRLIAFDPKDRPTAEEAL 311
E +FP++ L+ +L+ + DPK R + E L
Sbjct: 238 EI--------------------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
Query: 312 ADPYFK 317
A PY +
Sbjct: 272 AHPYVQ 277
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 97/203 (47%), Gaps = 19/203 (9%)
Query: 31 IGKGSYGVVCAAIDTHTGEK--VAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIK 88
+G G++G V + ++ VAIK + E +D ++RE +++ L +P IV +
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEK-ADTEEMMREAQIMHQLDNPYIVRLI 76
Query: 89 RIMLPPSKREFKDIYVVFELMESD-LHQ-VIKANDDLTREHHQFFLYQMLRALKYMHTAN 146
+ + + + +V E+ LH+ ++ +++ + L+Q+ +KY+ N
Sbjct: 77 GVC------QAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKN 130
Query: 147 VYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW---YRAPELCGS 203
HRDL +N+L K+ DFGL++ +D ++T A +W + APE
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS---YYTARSAGKWPLKWYAPECIN- 186
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT 226
F K++ D+WS G E L+
Sbjct: 187 -FRKFSSRSDVWSYGVTMWEALS 208
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH--DVFEHISDAIRILREVKLL-RLLRH 81
Y IL+ IG G V ++ + AIK ++ + D+ R E+ L +L +H
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQH 70
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
D K I L + + IY+V E DL+ +K + + + ML A+
Sbjct: 71 SD----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 126
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + H DLKP N L + LK+ DFG+A DT +V V T Y PE
Sbjct: 127 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAI 184
Query: 202 ---------GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
G SK +P D+WS+GCI + GK P + +++Q+ + ++ P+
Sbjct: 185 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNH 241
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALR-LLQRLIAFDPKDRPTAEEAL 311
E +FP++ L+ +L+ + DPK R + E L
Sbjct: 242 EI--------------------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 275
Query: 312 ADPYFK 317
A PY +
Sbjct: 276 AHPYVQ 281
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 149/372 (40%), Gaps = 89/372 (23%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
RY ++ +G G + V + D + VA+K + EH ++ L E++LL+ +R+
Sbjct: 21 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETA--LDEIRLLKSVRNS 77
Query: 83 DIVEIKRIMLPPSKREFK-------DIYVVFELMESDL-HQVIKAN-DDLTREHHQFFLY 133
D + R M+ +FK I +VFE++ L +IK+N L + +
Sbjct: 78 DPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQ 137
Query: 134 QMLRALKYMHT-ANVYHRDLKPKNILANAN------------------------------ 162
Q+L+ L Y+HT + H D+KP+NIL + N
Sbjct: 138 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTA 197
Query: 163 -------------------CKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE-LCG 202
K+K+ D G A +T+ + TR YR+ E L G
Sbjct: 198 PATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK------HFTEDIQTRQYRSLEVLIG 251
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLTGKPLF---PGKSVVHQLD---LITDLLGTPSPETIA 256
S ++ TPA DIWS C+ E+ TG LF G+ D LI +LLG + I
Sbjct: 252 SGYN--TPA-DIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIV 308
Query: 257 VVRNEK----ARKYLTEMRKKPPVPLFQ------KFPNVDPLALR-LLQRLIAFDPKDRP 305
+ K + L + K P LF+ ++ + L ++ P+ R
Sbjct: 309 AGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRA 368
Query: 306 TAEEALADPYFK 317
TA E L P+
Sbjct: 369 TAAECLRHPWLN 380
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGE-----KVAIKKIHDVFEHISDAIRILREVKLL- 76
N + + +G G++G V A G+ KVA+K + H + ++ E+K++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST-AHADEKEALMSELKIMS 104
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVI--KANDDLTREHHQ----- 129
L +H +IV +L + + DL + KA DL +E +
Sbjct: 105 HLGQHENIVN----LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 160
Query: 130 ---FFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFW 186
F Q+ + + ++ + N HRD+ +N+L K+ DFGLAR +D+ V
Sbjct: 161 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 220
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ + G +PG
Sbjct: 221 NARLPVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 265
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH--DVFEHISDAIRILREVKLL-RLLRH 81
Y IL+ IG G V ++ + AIK ++ + D+ R E+ L +L +H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQH 114
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
D K I L + + IY+V E DL+ +K + + + ML A+
Sbjct: 115 SD----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + H DLKP N L + LK+ DFG+A DT +V V T Y PE
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAI 228
Query: 202 ---------GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
G SK +P D+WS+GCI + GK F + +++Q+ + ++ P+
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAII-DPNH 285
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALR-LLQRLIAFDPKDRPTAEEAL 311
E +FP++ L+ +L+ + DPK R + E L
Sbjct: 286 EI--------------------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
Query: 312 ADPYFK 317
A PY +
Sbjct: 320 AHPYVQ 325
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 118/301 (39%), Gaps = 61/301 (20%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+K +E+IG G +G V A G+ IK++ E + REVK L L H +I
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNE------KAEREVKALAKLDHVNI 66
Query: 85 VEIKRIM-----------LPPSKREFKDIYVVFELME-SDLHQVI--KANDDLTREHHQF 130
V S+ + K +++ E + L Q I + + L +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 131 FLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV 190
Q+ + + Y+H+ + +RDLKP NI ++K+ DFGL +D
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR----XRSK 182
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTP 250
T Y +PE S Y +D++++G I AE+L H D +
Sbjct: 183 GTLRYMSPEQISS--QDYGKEVDLYALGLILAELL------------HVCDTAFE----- 223
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEEA 310
K+ T++R +F K LLQ+L++ P+DRP E
Sbjct: 224 ------------TSKFFTDLRDGIISDIFDKKEKT------LLQKLLSKKPEDRPNTSEI 265
Query: 311 L 311
L
Sbjct: 266 L 266
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 129/306 (42%), Gaps = 51/306 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH--DVFEHISDAIRILREVKLL-RLLRH 81
Y IL+ IG G V ++ + AIK ++ + D+ R E+ L +L +H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQH 114
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
D K I L + + IY+V E DL+ +K + + + ML A+
Sbjct: 115 SD----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + H DLKP N L + LK+ DFG+A DT +V V T Y PE
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT-TSVVKDSQVGTVNYMPPEAI 228
Query: 202 ---------GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
G SK +P D+WS+GCI + GK F + +++Q+ + ++ P+
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAII-DPNH 285
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALR-LLQRLIAFDPKDRPTAEEAL 311
E +FP++ L+ +L+ + DPK R + E L
Sbjct: 286 EI--------------------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
Query: 312 ADPYFK 317
A PY +
Sbjct: 320 AHPYVQ 325
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 17/216 (7%)
Query: 21 DANRYKILEVIGK-GSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLL 79
D N E+IG+ G +G V A + T A K I E + + E+ +L
Sbjct: 7 DLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV--EIDILASC 64
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVI--KANDDLTREHHQFFLYQMLR 137
HP+IV++ + +++++ E + + LT Q Q L
Sbjct: 65 DHPNIVKLLDAFYYEN-----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 119
Query: 138 ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTD-YVATRWYR 196
AL Y+H + HRDLK NIL + +K+ DFG V+ +T + D ++ T ++
Sbjct: 120 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFG---VSAKNTRTXIQRRDSFIGTPYWM 176
Query: 197 APELCGSFFSKYTP---AIDIWSIGCIFAEVLTGKP 229
APE+ SK P D+WS+G E+ +P
Sbjct: 177 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP 212
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 25/228 (10%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGE-----KVAIKKIHDVFEHISDAIRILREVKLL- 76
N + + +G G++G V A G+ KVA+K + H + ++ E+K++
Sbjct: 38 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST-AHADEKEALMSELKIMS 96
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVI--KANDDLTREHHQ----- 129
L +H +IV +L + + DL + KA DL +E +
Sbjct: 97 HLGQHENIVN----LLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELR 152
Query: 130 ---FFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFW 186
F Q+ + + ++ + N HRD+ +N+L K+ DFGLAR +D+ V
Sbjct: 153 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKG 212
Query: 187 TDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ + G +PG
Sbjct: 213 NARLPVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 257
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 33/239 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAA-----IDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLR 77
NR + +G G++G V A I + VA+K + H+++ ++ E+K+L
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLS 97
Query: 78 LL-RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDD-------------- 122
L H +IV +L + + DL ++ D
Sbjct: 98 YLGNHMNIVN----LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 153
Query: 123 ----LTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
L E F YQ+ + + ++ + N HRDL +NIL K+CDFGLAR +
Sbjct: 154 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 213
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
D+ V + +W APE F YT D+WS G E+ + G +PG V
Sbjct: 214 DSNYVVKGNARLPVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 269
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 33/239 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAA-----IDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLR 77
NR + +G G++G V A I + VA+K + H+++ ++ E+K+L
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLS 99
Query: 78 LL-RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDD-------------- 122
L H +IV +L + + DL ++ D
Sbjct: 100 YLGNHMNIVN----LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 155
Query: 123 ----LTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
L E F YQ+ + + ++ + N HRDL +NIL K+CDFGLAR +
Sbjct: 156 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 215
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
D+ V + +W APE F YT D+WS G E+ + G +PG V
Sbjct: 216 DSNYVVKGNARLPVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 271
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 109/231 (47%), Gaps = 39/231 (16%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHD--VFEHISDAIRILREVKLLRLL-R 80
+G+G++G V A ID ++ VA+K + D E +SD ++ E+++++++ +
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSD---LVSEMEMMKMIGK 99
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQ 129
H +I+ L + + +YV+ E + +L + ++A + D+ R E
Sbjct: 100 HKNIIN-----LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQM 154
Query: 130 FF------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMT 183
F YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR +
Sbjct: 155 TFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYK 214
Query: 184 VFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ T G +PG
Sbjct: 215 KTTNGRLPVKWM-APEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 100/216 (46%), Gaps = 16/216 (7%)
Query: 20 GDANRYKILEV---IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLL 76
G +N + L+ IG+GS+ V +DT T +VA ++ D S+ R E + L
Sbjct: 20 GXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXL 79
Query: 77 RLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD-LHQVIKANDDLTREHHQFFLYQM 135
+ L+HP+IV K + K I +V EL S L +K + + + Q+
Sbjct: 80 KGLQHPNIVRFYDSWESTVKGK-KCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI 138
Query: 136 LRALKYMHTAN--VYHRDLKPKNI-LANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
L+ L+++HT + HRDLK NI + +K+ D GLA + + V + T
Sbjct: 139 LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAV-----IGT 193
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK 228
+ APE + KY ++D+++ G E T +
Sbjct: 194 PEFXAPE---XYEEKYDESVDVYAFGXCXLEXATSE 226
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 33/239 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAA-----IDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLR 77
NR + +G G++G V A I + VA+K + H+++ ++ E+K+L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLS 104
Query: 78 LL-RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDD-------------- 122
L H +IV +L + + DL ++ D
Sbjct: 105 YLGNHMNIVN----LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 160
Query: 123 ----LTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
L E F YQ+ + + ++ + N HRDL +NIL K+CDFGLAR +
Sbjct: 161 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 220
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
D+ V + +W APE F YT D+WS G E+ + G +PG V
Sbjct: 221 DSNYVVKGNARLPVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 102/229 (44%), Gaps = 23/229 (10%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGE-----KVAIKKIHDVFEHISDAIRILREVKLL- 76
N + + +G G++G V A G+ KVA+K + H + ++ E+K++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST-AHADEKEALMSELKIMS 104
Query: 77 RLLRHPDIVEI-------KRIMLPPSKREFKDIYVVFE----LMESDLHQVIKANDDLTR 125
L +H +IV + +++ + D+ ++E+D I AN L+
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI-ANSTLST 163
Query: 126 EHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
F Q+ + + ++ + N HRD+ +N+L K+ DFGLAR +D+ V
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ + G +PG
Sbjct: 224 GNARLPVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 33/239 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAA-----IDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLR 77
NR + +G G++G V A I + VA+K + H+++ ++ E+K+L
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLS 104
Query: 78 LL-RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDD-------------- 122
L H +IV +L + + DL ++ D
Sbjct: 105 YLGNHMNIVN----LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 160
Query: 123 ----LTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
L E F YQ+ + + ++ + N HRDL +NIL K+CDFGLAR +
Sbjct: 161 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKN 220
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
D+ V + +W APE F YT D+WS G E+ + G +PG V
Sbjct: 221 DSNYVVKGNARLPVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 276
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 98/239 (41%), Gaps = 33/239 (13%)
Query: 23 NRYKILEVIGKGSYGVVCAA-----IDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLR 77
NR + +G G++G V A I + VA+K + H+++ ++ E+K+L
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLS 81
Query: 78 LL-RHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDD-------------- 122
L H +IV +L + + DL ++ D
Sbjct: 82 YLGNHMNIVN----LLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED 137
Query: 123 ----LTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFS 178
L E F YQ+ + + ++ + N HRDL +NIL K+CDFGLAR +
Sbjct: 138 DELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 197
Query: 179 DTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
D+ V + +W APE F YT D+WS G E+ + G +PG V
Sbjct: 198 DSNYVVKGNARLPVKW-MAPE--SIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 253
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLL-RHP 82
+G+G++G V A ID ++ VA+K + D D ++ E+++++++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQFF 131
+I+ L + + +YV+ E + +L + ++A + D+ R E F
Sbjct: 102 NIIN-----LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTF 156
Query: 132 ------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ T G +PG
Sbjct: 217 TNGRLPVKWM-APEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLL-RHP 82
+G+G++G V A ID ++ VA+K + D D ++ E+++++++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQFF 131
+I+ L + + +YV+ E + +L + ++A + D+ R E F
Sbjct: 102 NIIN-----LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 132 ------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ T G +PG
Sbjct: 217 TNGRLPVKWM-APEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 32 GKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRLLRHPDIVEIKR 89
G+G +GVV +T VA+KK+ + + ++ ++ +E+K+ +H ++VE
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVE--- 85
Query: 90 IMLPPSKREFKDIYVVFELMES----DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
L + D+ +V+ + D + L+ + ++H
Sbjct: 86 --LLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHEN 143
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
+ HRD+K NIL + K+ DFGLAR A V + V T Y APE +
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLAR-ASEKFAQXVXXSRIVGTTAYXAPE---ALR 199
Query: 206 SKYTPAIDIWSIGCIFAEVLTGKP 229
+ TP DI+S G + E++TG P
Sbjct: 200 GEITPKSDIYSFGVVLLEIITGLP 223
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 131 FLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV 190
F +Q+ + ++Y+ ++ HRDL +NIL K+K+ DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI 214
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPLFPG 233
+W L F YT D+WS G + E++T G P +PG
Sbjct: 215 PVKWMAIESL---FDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 74
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 75 VDNPHVCRLLGICLTST------VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 129 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 189 LESI---LHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 74
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 75 VDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 128
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 129 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 188
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 189 LESI---LHRIYTHQSDVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 73
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 74 VDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 188 LESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 119/314 (37%), Gaps = 74/314 (23%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDI 84
+K +E+IG G +G V A G+ I+++ E + REVK L L H +I
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNE------KAEREVKALAKLDHVNI 67
Query: 85 VEIKRIM------------------------LPPSKREFKDIYVVFELME-SDLHQVI-- 117
V S+ + K +++ E + L Q I
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 118 KANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAF 177
+ + L + Q+ + + Y+H+ + HRDLKP NI ++K+ DFGL
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 178 SDTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVV 237
+D T T Y +PE S Y +D++++G I AE+L
Sbjct: 188 NDGKRTR----SKGTLRYMSPEQISS--QDYGKEVDLYALGLILAELL------------ 229
Query: 238 HQLDLITDLLGTPSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLI 297
H D + K+ T++R +F K LLQ+L+
Sbjct: 230 HVCDTAFE-----------------TSKFFTDLRDGIISDIFDKKEKT------LLQKLL 266
Query: 298 AFDPKDRPTAEEAL 311
+ P+DRP E L
Sbjct: 267 SKKPEDRPNTSEIL 280
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 75
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 76 VDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 190 LESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 140/358 (39%), Gaps = 82/358 (22%)
Query: 19 YGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHD---VFEHISDAIRILREVK- 74
Y DA RY ++ +G G + V A D VA+K + E D I++L+ V
Sbjct: 16 YKDA-RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVND 74
Query: 75 -------------LLRLLRH-----PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQV 116
+L+LL H P+ V + +VFE++ +L +
Sbjct: 75 ADNTKEDSMGANHILKLLDHFNHKGPNGVHV---------------VMVFEVLGENLLAL 119
Query: 117 IKANDDLTREHHQFFLY-------QMLRALKYMHT-ANVYHRDLKPKNILANAN------ 162
IK EH L Q+L L YMH + H D+KP+N+L
Sbjct: 120 IK-----KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 174
Query: 163 CKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFA 222
++K+ D G A + D +T+ + TR YR+PE+ + + DIWS C+
Sbjct: 175 IQIKIADLGNA--CWYDE----HYTNSIQTREYRSPEVL--LGAPWGCGADIWSTACLIF 226
Query: 223 EVLTGKPLF---PGKSVVHQLDLITDLLGTPSPETIAVVRNEK-------ARKYLTEMRK 272
E++TG LF G S D I ++ ++RN K +R L + K
Sbjct: 227 ELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK 286
Query: 273 KPPVPLFQ------KFPNVDPLALR-LLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
PL KF + + L ++ DP+ R A + P+ K +E
Sbjct: 287 LKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME 344
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 98/223 (43%), Gaps = 15/223 (6%)
Query: 23 NRYKILEVIGKGSYGVVC-AAIDTHTGE--KVAIKKIHDVFEHISDAIRILREVKLLRLL 79
++ + ++GKG +G V A + G KVA+K + SD LRE ++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 80 RHPDIVEIKRIMLPP-SKREFKDIYVVFELME-SDLHQVIKAND------DLTREHHQFF 131
HP + ++ + L +K V+ M+ DLH + A+ +L + F
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 132 LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVA 191
+ + ++Y+ + N HRDL +N + + + V DFGL+R +S +
Sbjct: 143 MVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLP 202
Query: 192 TRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W L + ++ ++ D+W+ G E++T G+ + G
Sbjct: 203 VKWLALESLADNLYTVHS---DVWAFGVTMWEIMTRGQTPYAG 242
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 77
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 78 VDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 192 LESI---LHRIYTHQSDVWSYGVTVWELMT 218
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 140/358 (39%), Gaps = 82/358 (22%)
Query: 19 YGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHD---VFEHISDAIRILREVK- 74
Y DA RY ++ +G G + V A D VA+K + E D I++L+ V
Sbjct: 16 YKDA-RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVND 74
Query: 75 -------------LLRLLRH-----PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQV 116
+L+LL H P+ V + +VFE++ +L +
Sbjct: 75 ADNTKEDSMGANHILKLLDHFNHKGPNGVHV---------------VMVFEVLGENLLAL 119
Query: 117 IKANDDLTREHHQFFLY-------QMLRALKYMHT-ANVYHRDLKPKNILANAN------ 162
IK EH L Q+L L YMH + H D+KP+N+L
Sbjct: 120 IK-----KYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENL 174
Query: 163 CKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFA 222
++K+ D G A + D +T+ + TR YR+PE+ + + DIWS C+
Sbjct: 175 IQIKIADLGNA--CWYDE----HYTNSIQTREYRSPEVL--LGAPWGCGADIWSTACLIF 226
Query: 223 EVLTGKPLF---PGKSVVHQLDLITDLLGTPSPETIAVVRNEK-------ARKYLTEMRK 272
E++TG LF G S D I ++ ++RN K +R L + K
Sbjct: 227 ELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK 286
Query: 273 KPPVPLFQ------KFPNVDPLALR-LLQRLIAFDPKDRPTAEEALADPYFKGLAKIE 323
PL KF + + L ++ DP+ R A + P+ K +E
Sbjct: 287 LKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGME 344
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 76
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 77 VDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 191 LESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 71 REVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKAN--------D 121
RE +LL L+H IV+ + + + +VFE M+ DL++ ++A+ D
Sbjct: 66 REAELLTNLQHEHIVKFYGVC-----GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVD 120
Query: 122 DLTRE-HHQFFLYQMLR-------ALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLA 173
R+ + L QML + Y+ + + HRDL +N L AN +K+ DFG++
Sbjct: 121 GQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
Query: 174 RVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
R +S V + RW PE + K+T D+WS G I E+ T
Sbjct: 181 RDVYSTDYYRVGGHTMLPIRWM-PPE--SIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKI------HDVFEHISDAIRILREVKL 75
+ +Y + +G G++G V A+D ++V +K I D + ++ E+ +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 76 LRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQM 135
L + H +I+++ I + F + + DL I + L + Q+
Sbjct: 83 LSRVEHANIIKVLDIF---ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
+ A+ Y+ ++ HRD+K +NI+ + +K+ DFG A A+ + +F+T + T Y
Sbjct: 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSA--AYLERG-KLFYT-FCGTIEY 195
Query: 196 RAPE-LCGSFFSKYTPAIDIWSIG 218
APE L G+ + P +++WS+G
Sbjct: 196 CAPEVLMGNPYRG--PELEMWSLG 217
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 108/232 (46%), Gaps = 41/232 (17%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLL-RHP 82
+G+G++G V A ID ++ VA+K + D D ++ E+++++++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQFF 131
+I+ L + + +YV+ E + +L + ++A + D+ R E F
Sbjct: 102 NIIN-----LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 132 ------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR D +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR----DINNIDY 212
Query: 186 WTDYVATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ + R + APE F YT D+WS G + E+ T G +PG
Sbjct: 213 YKNTTNGRLPVKWMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 131 FLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV 190
F +Q+ + ++Y+ + HRDL +NIL K+K+ DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRI 214
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPLFPG 233
+W L F YT D+WS G + E++T G P +PG
Sbjct: 215 PVKWMAIESL---FDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLL-RHP 82
+G+G++G V A ID ++ VA+K + D D ++ E+++++++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQFF 131
+I I L + + +YV+ E + +L + ++A + D+ R E F
Sbjct: 102 NI-----ITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 132 ------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ T G +PG
Sbjct: 217 TNGRLPVKWM-APEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
L+ +G G +GVV G+ VAIK I E + E K++ L H +V+
Sbjct: 29 LKELGTGQFGVV--KYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 87 IKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR-------AL 139
+ + + I+++ E M + + L H+F Q+L A+
Sbjct: 84 LYGVCTKQ-----RPIFIITEYMANGC-----LLNYLREMRHRFQTQQLLEMCKDVCEAM 133
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+Y+ + HRDL +N L N +KV DFGL+R D + + + RW PE
Sbjct: 134 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKF-PVRW-SPPE 191
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ +SK++ DIW+ G + E+ +
Sbjct: 192 VL--MYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 98
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 99 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 152
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 153 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 212
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 213 LESI---LHRIYTHQSDVWSYGVTVWELMT 239
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 125/317 (39%), Gaps = 80/317 (25%)
Query: 25 YKIL-EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKL-LRLLRHP 82
YK+ +V+G G G V + T EK A+K + D + REV+L R + P
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCP 71
Query: 83 DIVEIKRIMLPPSKREFKDIY-------VVFELMES-DLHQVIKANDD--LTREHHQFFL 132
IV I + ++++Y +V E ++ +L I+ D T +
Sbjct: 72 HIVRIVDV--------YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANA---NCKLKVCDFGLARVAFSDTPMTVFWTDY 189
+ A++Y+H+ N+ HRD+KP+N+L + N LK+ DFG A+
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--------------- 168
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGT 249
E G KY + D+WS+G I +L G P F
Sbjct: 169 ---------ETTG---EKYDKSCDMWSLGVIMYILLCGYPPF------------------ 198
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
S +A+ K R + + P ++ V L++ L+ +P R T E
Sbjct: 199 YSNHGLAISPGMKTRIRMGQYEFPNP-----EWSEVSEEVKMLIRNLLKTEPTQRMTITE 253
Query: 310 ALADPYFKGLAKIEREP 326
+ P+ K+ + P
Sbjct: 254 FMNHPWIMQSTKVPQTP 270
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 128/306 (41%), Gaps = 51/306 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH--DVFEHISDAIRILREVKLL-RLLRH 81
Y IL+ IG G V ++ + AIK ++ + D+ R E+ L +L +H
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQH 114
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
D K I L + + IY+V E DL+ +K + + + ML A+
Sbjct: 115 SD----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 170
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + H DLKP N L + LK+ DFG+A DT +V V Y PE
Sbjct: 171 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDT-TSVVKDSQVGAVNYMPPEAI 228
Query: 202 ---------GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
G SK +P D+WS+GCI + GK F + +++Q+ + ++ P+
Sbjct: 229 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAII-DPNH 285
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALR-LLQRLIAFDPKDRPTAEEAL 311
E +FP++ L+ +L+ + DPK R + E L
Sbjct: 286 EI--------------------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319
Query: 312 ADPYFK 317
A PY +
Sbjct: 320 AHPYVQ 325
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 6/105 (5%)
Query: 131 FLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV 190
F +Q+ + ++Y+ + HRDL +NIL K+K+ DFGL+R + + +
Sbjct: 155 FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRI 214
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPLFPG 233
+W L F YT D+WS G + E++T G P +PG
Sbjct: 215 PVKWMAIESL---FDHIYTTQSDVWSFGVLLWEIVTLGGNP-YPG 255
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 83
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 84 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 137
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 138 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 197
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 198 LESI---LHRIYTHQSDVWSYGVTVWELMT 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 75
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 76 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 190 LESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 73
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 74 VDNPHVCRLLGICLTST------VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 188 LESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 76
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 77 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 191 LESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 76
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 77 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 191 LESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 80
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 81 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 195 LESI---LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 73
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 74 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 188 LESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 76
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 77 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 130
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 131 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 190
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 191 LESI---LHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 79
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 80 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 133
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 134 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 193
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 194 LESI---LHRIYTHQSDVWSYGVTVWELMT 220
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 60/117 (51%), Gaps = 7/117 (5%)
Query: 112 DLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANAN-CKLKVCDF 170
DL I L E + F +Q+L A+++ H V HRD+K +NIL + N +LK+ DF
Sbjct: 143 DLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDF 202
Query: 171 GLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTG 227
G + DT +TD+ TR Y PE + + + +WS+G + +++ G
Sbjct: 203 G-SGALLKDT----VYTDFDGTRVYSPPEWI-RYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 128/308 (41%), Gaps = 51/308 (16%)
Query: 18 EYGDANRYKILE-VIGKGSYGVVCAAIDT-HTGEKVAIK-KIHDVFEHISDAIRILREVK 74
+YG A +L ++G+G +G V + T H GEK+ + K + + + + E
Sbjct: 2 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV 61
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQ 134
+++ L HP IV++ I+ ++Y EL H + + + L + Q
Sbjct: 62 IMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSLQ 117
Query: 135 MLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRW 194
+ +A+ Y+ + N HRD+ +NIL + +K+ DFGL+R D + +W
Sbjct: 118 ICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIKW 176
Query: 195 YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GK-PLF--PGKSVVHQLDLITDLLGTP 250
+PE F ++T A D+W E+L+ GK P F K V+ L+ L P
Sbjct: 177 -MSPESIN--FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL---P 230
Query: 251 SPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE- 309
P+ PPV L+ R +DP DRP E
Sbjct: 231 KPDLC------------------PPV------------LYTLMTRCWDYDPSDRPRFTEL 260
Query: 310 --ALADPY 315
+L+D Y
Sbjct: 261 VCSLSDVY 268
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
L+ +G G +GVV G+ VAIK I E + E K++ L H +V+
Sbjct: 29 LKELGTGQFGVV--KYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQ 83
Query: 87 IKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR-------AL 139
+ + + I+++ E M + + L H+F Q+L A+
Sbjct: 84 LYGVCTKQ-----RPIFIITEYMANGC-----LLNYLREMRHRFQTQQLLEMCKDVCEAM 133
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+Y+ + HRDL +N L N +KV DFGL+R D + + + RW PE
Sbjct: 134 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SPPE 191
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ +SK++ DIW+ G + E+ +
Sbjct: 192 VL--MYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGE-----KVAIKKIHDVFEHISDAIRILREVKLL- 76
N + + +G G++G V A G+ KVA+K + H + ++ E+K++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST-AHADEKEALMSELKIMS 104
Query: 77 RLLRHPDIVEI-------KRIMLPPSKREFKDIYVVFE----LMESDLHQVIKANDDLTR 125
L +H +IV + +++ + D+ ++E+D I AN +
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAI-ANSTAST 163
Query: 126 EHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
F Q+ + + ++ + N HRD+ +N+L K+ DFGLAR +D+ V
Sbjct: 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVK 223
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ + G +PG
Sbjct: 224 GNARLPVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 269
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLL-RHP 82
+G+G++G V A ID ++ VA+K + D D ++ E+++++++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQFF 131
+I I L + + +YV+ E + +L + ++A + D+ R E F
Sbjct: 102 NI-----IHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 132 ------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ T G +PG
Sbjct: 217 TNGRLPVKWM-APEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 73
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 74 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 188 LESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 127/306 (41%), Gaps = 51/306 (16%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIH--DVFEHISDAIRILREVKLL-RLLRH 81
Y IL+ IG G V ++ + AIK ++ + D+ R E+ L +L +H
Sbjct: 30 YSILKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQH 86
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKY 141
D K I L + + IY+V E DL+ +K + + + ML A+
Sbjct: 87 SD----KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHT 142
Query: 142 MHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELC 201
+H + H DLKP N L + LK+ DFG+A D V V T Y PE
Sbjct: 143 IHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVK-DSQVGTVNYMPPEAI 200
Query: 202 ---------GSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSP 252
G SK +P D+WS+GCI + GK P + +++Q+ + ++ P+
Sbjct: 201 KDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAII-DPNH 257
Query: 253 ETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALR-LLQRLIAFDPKDRPTAEEAL 311
E +FP++ L+ +L+ + DPK R + E L
Sbjct: 258 EI--------------------------EFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
Query: 312 ADPYFK 317
A PY +
Sbjct: 292 AHPYVQ 297
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 53/309 (17%)
Query: 18 EYGDANRYKILE-VIGKGSYGVVCAAIDT-HTGEK--VAIKKIHDVFEHISDAIRILREV 73
+YG A +L ++G+G +G V + T H GEK VA+K + + + + E
Sbjct: 18 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEA 76
Query: 74 KLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLY 133
+++ L HP IV++ I+ ++Y EL H + + + L +
Sbjct: 77 VIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSL 132
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q+ +A+ Y+ + N HRD+ +NIL + +K+ DFGL+R D + +
Sbjct: 133 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIK 191
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GK-PLF--PGKSVVHQLDLITDLLGT 249
W +PE F ++T A D+W E+L+ GK P F K V+ L+ L
Sbjct: 192 W-MSPESIN--FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL--- 245
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
P P+ PPV L+ R +DP DRP E
Sbjct: 246 PKPDLC------------------PPV------------LYTLMTRCWDYDPSDRPRFTE 275
Query: 310 ---ALADPY 315
+L+D Y
Sbjct: 276 LVCSLSDVY 284
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
L+ +G G +GVV G+ VAIK I E + E K++ L H +V+
Sbjct: 9 LKELGTGQFGVV--KYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQ 63
Query: 87 IKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR-------AL 139
+ + + I+++ E M + + L H+F Q+L A+
Sbjct: 64 LYGVCTKQ-----RPIFIITEYMANGC-----LLNYLREMRHRFQTQQLLEMCKDVCEAM 113
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+Y+ + HRDL +N L N +KV DFGL+R D + + + RW PE
Sbjct: 114 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SPPE 171
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ +SK++ DIW+ G + E+ +
Sbjct: 172 VL--MYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 35/232 (15%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLL-RHP 82
+G+G +G V A ID ++ VA+K + D D ++ E+++++++ +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 147
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQFF 131
+I+ L + + +YV+ E + +L + ++A + D+ R E F
Sbjct: 148 NIIN-----LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 202
Query: 132 ------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR +
Sbjct: 203 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+ +W APE F YT D+WS G + E+ T G +PG V
Sbjct: 263 TNGRLPVKWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 311
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 93/207 (44%), Gaps = 14/207 (6%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKVAIK-KIHDVFEHISDAIR--ILREVKLLRLLRH 81
+K ++V+G G++G V + GEKV I I ++ E S IL E ++ + +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRAL 139
P + + I L + + ++ +LM L V + D++ ++ + Q+ + +
Sbjct: 111 PHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 164
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 165 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM---A 221
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT 226
L YT D+WS G E++T
Sbjct: 222 LESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 129/309 (41%), Gaps = 53/309 (17%)
Query: 18 EYGDANRYKILE-VIGKGSYGVVCAAIDT-HTGEK--VAIKKIHDVFEHISDAIRILREV 73
+YG A +L ++G+G +G V + T H GEK VA+K + + + + E
Sbjct: 6 QYGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCT-LDNKEKFMSEA 64
Query: 74 KLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLY 133
+++ L HP IV++ I+ ++Y EL H + + + L +
Sbjct: 65 VIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELG----HYLERNKNSLKVLTLVLYSL 120
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q+ +A+ Y+ + N HRD+ +NIL + +K+ DFGL+R D + +
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRY-IEDEDYYKASVTRLPIK 179
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GK-PLF--PGKSVVHQLDLITDLLGT 249
W +PE F ++T A D+W E+L+ GK P F K V+ L+ L
Sbjct: 180 W-MSPESIN--FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRL--- 233
Query: 250 PSPETIAVVRNEKARKYLTEMRKKPPVPLFQKFPNVDPLALRLLQRLIAFDPKDRPTAEE 309
P P+ PPV L+ R +DP DRP E
Sbjct: 234 PKPDLC------------------PPV------------LYTLMTRCWDYDPSDRPRFTE 263
Query: 310 ---ALADPY 315
+L+D Y
Sbjct: 264 LVCSLSDVY 272
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 95/210 (45%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 67
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 68 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 121
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 122 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 181
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 182 LESI---LHRIYTHQSDVWSYGVTVWELMT 208
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 17/203 (8%)
Query: 27 ILEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
+L+ +G G +GVV + G+ VA+K I E +E + + L HP +V
Sbjct: 12 LLKELGSGQFGVV--KLGKWKGQYDVAVKMIK---EGSMSEDEFFQEAQTMMKLSHPKLV 66
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRALKYMH 143
+ + +E+ IY+V E + + L+ + L Y + + ++
Sbjct: 67 KFYGV----CSKEYP-IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE 121
Query: 144 TANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGS 203
+ HRDL +N L + + +KV DFG+ R D ++ T + +W APE+
Sbjct: 122 SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKF-PVKW-SAPEVFHY 179
Query: 204 FFSKYTPAIDIWSIGCIFAEVLT 226
F KY+ D+W+ G + EV +
Sbjct: 180 F--KYSSKSDVWAFGILMWEVFS 200
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 35/229 (15%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLL-RHP 82
+G+G +G V A ID ++ VA+K + D D ++ E+++++++ +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 88
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQFF 131
+I+ L + + +YV+ E + +L + ++A + D+ R E F
Sbjct: 89 NIIN-----LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 143
Query: 132 ------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR +
Sbjct: 144 KDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ T G +PG
Sbjct: 204 TNGRLPVKWM-APE--ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 249
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 94/233 (40%), Gaps = 39/233 (16%)
Query: 15 FFTEYGDANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVK 74
F + A + +LE +GKG YG V + GE VA+K +F D RE +
Sbjct: 29 FLVQRTVARQITLLECVGKGRYGEVWRG--SWQGENVAVK----IFSS-RDEKSWFRETE 81
Query: 75 LLR--LLRHPDIVEI-----------KRIMLPPSKREFKDIYVVFELMESD----LHQVI 117
L +LRH +I+ ++ L E +Y +L D L V+
Sbjct: 82 LYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVL 141
Query: 118 KANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV-A 176
L H + F Q A+ HRDLK KNIL N + + D GLA + +
Sbjct: 142 SIASGLAHLHIEIFGTQGKPAIA--------HRDLKSKNILVKKNGQCCIADLGLAVMHS 193
Query: 177 FSDTPMTVFWTDYVATRWYRAPELCG-----SFFSKYTPAIDIWSIGCIFAEV 224
S + V V T+ Y APE+ F Y +DIW+ G + EV
Sbjct: 194 QSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSY-KRVDIWAFGLVLWEV 245
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
L+ +G G +GVV G+ VAIK I E + E K++ L H +V+
Sbjct: 14 LKELGTGQFGVV--KYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 87 IKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR-------AL 139
+ + + I+++ E M + + L H+F Q+L A+
Sbjct: 69 LYGVCTKQ-----RPIFIITEYMANGC-----LLNYLREMRHRFQTQQLLEMCKDVCEAM 118
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+Y+ + HRDL +N L N +KV DFGL+R D + + + RW PE
Sbjct: 119 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SPPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ +SK++ DIW+ G + E+ +
Sbjct: 177 VL--MYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
L+ +G G +GVV G+ VAIK I E + E K++ L H +V+
Sbjct: 20 LKELGTGQFGVV--KYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQ 74
Query: 87 IKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR-------AL 139
+ + + I+++ E M + + L H+F Q+L A+
Sbjct: 75 LYGVCTKQ-----RPIFIITEYMANGC-----LLNYLREMRHRFQTQQLLEMCKDVCEAM 124
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+Y+ + HRDL +N L N +KV DFGL+R D + + + RW PE
Sbjct: 125 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SPPE 182
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ +SK++ DIW+ G + E+ +
Sbjct: 183 VL--MYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
L+ +G G +GVV G+ VAIK I E + E K++ L H +V+
Sbjct: 13 LKELGTGQFGVV--KYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQ 67
Query: 87 IKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR-------AL 139
+ + + I+++ E M + + L H+F Q+L A+
Sbjct: 68 LYGVCTKQ-----RPIFIITEYMANGC-----LLNYLREMRHRFQTQQLLEMCKDVCEAM 117
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+Y+ + HRDL +N L N +KV DFGL+R D + + + RW PE
Sbjct: 118 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKF-PVRW-SPPE 175
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ +SK++ DIW+ G + E+ +
Sbjct: 176 VL--MYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR + +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 107/230 (46%), Gaps = 37/230 (16%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLL-RHP 82
+G+G +G V A ID ++ VA+K + D D ++ E+++++++ +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 93
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQFF 131
+I+ L + + +YV+ E + +L + ++A + D+ R E F
Sbjct: 94 NIIN-----LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 148
Query: 132 ------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR +
Sbjct: 149 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 186 WTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE + F + YT D+WS G + E+ T G +PG
Sbjct: 209 TNGRLPVKWM-APE---ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 254
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 89/215 (41%), Gaps = 27/215 (12%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKI-----HDVFEHISDAIRILREVKLLRLLRHPDIV 85
IGKG +G+V VAIK + E I REV ++ L HP+IV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 86 EIKRIMLPPSKREFKDIYVVFELME-SDL-HQVIKANDDLTREHHQFFLYQMLRALKYMH 143
++ +M P + +V E + DL H+++ + + + ++YM
Sbjct: 87 KLYGLMHNPPR-------MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 144 TAN--VYHRDLKPKNIL-----ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
N + HRDL+ NI NA KV DFGL++ + + + +
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSV------SGLLGNFQWM 193
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
APE G+ YT D +S I +LTG+ F
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 111/242 (45%), Gaps = 37/242 (15%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLL-RHP 82
+G+G +G V A ID ++ VA+K + D D ++ E+++++++ +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 90
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQFF 131
+I+ L + + +YV+ E + +L + ++A + D+ R E F
Sbjct: 91 NIIN-----LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 145
Query: 132 ------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR +
Sbjct: 146 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 186 WTDYVATRWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLI 243
+ +W APE + F + YT D+WS G + E+ T G +PG V L+
Sbjct: 206 TNGRLPVKWM-APE---ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 261
Query: 244 TD 245
+
Sbjct: 262 KE 263
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L N +K+ DFGLAR + +
Sbjct: 164 YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 193 RWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W APE F YT D+WS G + E+ T G +PG
Sbjct: 224 KWM-APEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 35/229 (15%)
Query: 31 IGKGSYGVVCAA----IDTHTGEK---VAIKKIHDVFEHISDAIRILREVKLLRLL-RHP 82
+G+G++G V A ID ++ VA+K + D D ++ E+++++++ +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATE-KDLSDLVSEMEMMKMIGKHK 101
Query: 83 DIVEIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKA--------NDDLTR--EHHQFF 131
+I+ L + + +YV+ E + +L + ++A + D+ R E F
Sbjct: 102 NIIN-----LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTF 156
Query: 132 ------LYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVF 185
YQ+ R ++Y+ + HRDL +N+L N +++ DFGLAR +
Sbjct: 157 KDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 186 WTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ T G +PG
Sbjct: 217 TNGRLPVKWM-APEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 26 KILEVIGKGSYGVVC-AAIDTHTGE--KVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
++LE +G GS+GVV D +G+ VA+K + DV +REV + L H
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLY-------- 133
+++ + ++L P + ++ + L+ D R+H FL
Sbjct: 81 RNLIRLYGVVLTPPMKMVTELAPLGSLL------------DRLRKHQGHFLLGTLSRYAV 128
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q+ + Y+ + HRDL +N+L +K+ DFGL R + V
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF 188
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPL--FPGKSVVHQLDLITDLLGT 249
+ APE + ++ A D W G E+ T +P G ++H++D + L
Sbjct: 189 AWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-- 244
Query: 250 PSPE 253
P PE
Sbjct: 245 PRPE 248
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 93/226 (41%), Gaps = 39/226 (17%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLR--LL 79
A++ +LE +GKG YG V + GE VA+K +F D RE +L +L
Sbjct: 7 AHQITLLECVGKGRYGEVWRG--SWQGENVAVK----IFSS-RDEKSWFRETELYNTVML 59
Query: 80 RHPDIVEI-----------KRIMLPPSKREFKDIYVVFELMESD----LHQVIKANDDLT 124
RH +I+ ++ L E +Y +L D L V+ L
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLA 119
Query: 125 REHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV-AFSDTPMT 183
H + F Q A+ HRDLK KNIL N + + D GLA + + S +
Sbjct: 120 HLHIEIFGTQGKPAIA--------HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLD 171
Query: 184 VFWTDYVATRWYRAPELCGS-----FFSKYTPAIDIWSIGCIFAEV 224
V V T+ Y APE+ F Y +DIW+ G + EV
Sbjct: 172 VGNNPRVGTKRYMAPEVLDETIQVDCFDSY-KRVDIWAFGLVLWEV 216
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 70
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 71 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 124
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 125 EGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 184
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 185 LESI---LHRIYTHQSDVWSYGVTVWELMT 211
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 26 KILEVIGKGSYGVVC-AAIDTHTGE--KVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
++LE +G GS+GVV D +G+ VA+K + DV +REV + L H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLY-------- 133
+++ + ++L P + ++ + L+ D R+H FL
Sbjct: 71 RNLIRLYGVVLTPPMKMVTELAPLGSLL------------DRLRKHQGHFLLGTLSRYAV 118
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q+ + Y+ + HRDL +N+L +K+ DFGL R + V
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF 178
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPL--FPGKSVVHQLDLITDLLGT 249
+ APE + ++ A D W G E+ T +P G ++H++D + L
Sbjct: 179 AWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-- 234
Query: 250 PSPE 253
P PE
Sbjct: 235 PRPE 238
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRLLR 80
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVD 77
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRA 138
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 78 NPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
+ Y+ + HRDL +N+L +K+ DFG A++ ++ V +W
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 192 SI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 75
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 76 VDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 129
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFG A++ ++ V +W
Sbjct: 130 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 189
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 190 LESI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 26 KILEVIGKGSYGVVC-AAIDTHTGE--KVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
++LE +G GS+GVV D +G+ VA+K + DV +REV + L H
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLY-------- 133
+++ + ++L P + ++ + L+ D R+H FL
Sbjct: 81 RNLIRLYGVVLTPPMKMVTELAPLGSLL------------DRLRKHQGHFLLGTLSRYAV 128
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q+ + Y+ + HRDL +N+L +K+ DFGL R + V
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 188
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPL--FPGKSVVHQLDLITDLLGT 249
+ APE + ++ A D W G E+ T +P G ++H++D + L
Sbjct: 189 AWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-- 244
Query: 250 PSPE 253
P PE
Sbjct: 245 PRPE 248
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 26 KILEVIGKGSYGVVC-AAIDTHTGE--KVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
++LE +G GS+GVV D +G+ VA+K + DV +REV + L H
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLY-------- 133
+++ + ++L P + ++ + L+ D R+H FL
Sbjct: 75 RNLIRLYGVVLTPPMKMVTELAPLGSLL------------DRLRKHQGHFLLGTLSRYAV 122
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q+ + Y+ + HRDL +N+L +K+ DFGL R + V
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 182
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPL--FPGKSVVHQLDLITDLLGT 249
+ APE + ++ A D W G E+ T +P G ++H++D + L
Sbjct: 183 AWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-- 238
Query: 250 PSPE 253
P PE
Sbjct: 239 PRPE 242
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 91/207 (43%), Gaps = 27/207 (13%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGE-KVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVE 86
L+ +G G +GVV G+ VAIK I E + E K++ L H +V+
Sbjct: 14 LKELGTGQFGVV--KYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQ 68
Query: 87 IKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLR-------AL 139
+ + + I+++ E M + + L H+F Q+L A+
Sbjct: 69 LYGVCTKQ-----RPIFIITEYMANGC-----LLNYLREMRHRFQTQQLLEMCKDVCEAM 118
Query: 140 KYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPE 199
+Y+ + HRDL +N L N +KV DFGL+R D + + + RW PE
Sbjct: 119 EYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKF-PVRW-SPPE 176
Query: 200 LCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ +SK++ DIW+ G + E+ +
Sbjct: 177 VL--MYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 77
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 78 VDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 131
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFG A++ ++ V +W
Sbjct: 132 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 191
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 192 LESI---LHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 26 KILEVIGKGSYGVVC-AAIDTHTGE--KVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
++LE +G GS+GVV D +G+ VA+K + DV +REV + L H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLY-------- 133
+++ + ++L P + ++ + L+ D R+H FL
Sbjct: 71 RNLIRLYGVVLTPPMKMVTELAPLGSLL------------DRLRKHQGHFLLGTLSRYAV 118
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q+ + Y+ + HRDL +N+L +K+ DFGL R + V
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPL--FPGKSVVHQLDLITDLLGT 249
+ APE + ++ A D W G E+ T +P G ++H++D + L
Sbjct: 179 AWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-- 234
Query: 250 PSPE 253
P PE
Sbjct: 235 PRPE 238
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 34/231 (14%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLL-R 77
D N K +VIG+G++G V A G ++ AIK++ + + D E+++L +
Sbjct: 23 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCK 81
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFE---------------LMESDLHQVIKANDD 122
L HP+I+ + + R + +Y+ E ++E+D I +
Sbjct: 82 LGHHPNIINL---LGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 136
Query: 123 LTREHHQF--FLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDT 180
T Q F + R + Y+ HRDL +NIL N K+ DFGL+R
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 196
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV--LTGKP 229
T+ + RW L +S YT D+WS G + E+ L G P
Sbjct: 197 KKTM---GRLPVRWMAIESL---NYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +K+ DFGLAR +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPV 216
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+W APE + F + YT D+WS G + E+ T G +PG V
Sbjct: 217 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 26 KILEVIGKGSYGVVC-AAIDTHTGE--KVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
++LE +G GS+GVV D +G+ VA+K + DV +REV + L H
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 70
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLY-------- 133
+++ + ++L P + ++ + L+ D R+H FL
Sbjct: 71 RNLIRLYGVVLTPPMKMVTELAPLGSLL------------DRLRKHQGHFLLGTLSRYAV 118
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q+ + Y+ + HRDL +N+L +K+ DFGL R + V
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 178
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPL--FPGKSVVHQLDLITDLLGT 249
+ APE + ++ A D W G E+ T +P G ++H++D + L
Sbjct: 179 AWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-- 234
Query: 250 PSPE 253
P PE
Sbjct: 235 PRPE 238
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+ G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 80
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 81 VDNPHVCRLLGICLTST------VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 195 LESI---LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 102/244 (41%), Gaps = 32/244 (13%)
Query: 26 KILEVIGKGSYGVVC-AAIDTHTGE--KVAIKKIH-DVFEHISDAIRILREVKLLRLLRH 81
++LE +G GS+GVV D +G+ VA+K + DV +REV + L H
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 74
Query: 82 PDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLY-------- 133
+++ + ++L P + ++ + L+ D R+H FL
Sbjct: 75 RNLIRLYGVVLTPPMKMVTELAPLGSLL------------DRLRKHQGHFLLGTLSRYAV 122
Query: 134 QMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATR 193
Q+ + Y+ + HRDL +N+L +K+ DFGL R + V
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF 182
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT--GKPL--FPGKSVVHQLDLITDLLGT 249
+ APE + ++ A D W G E+ T +P G ++H++D + L
Sbjct: 183 AWCAPESLKT--RTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-- 238
Query: 250 PSPE 253
P PE
Sbjct: 239 PRPE 242
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 34/231 (14%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLL-R 77
D N K +VIG+G++G V A G ++ AIK++ + + D E+++L +
Sbjct: 13 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCK 71
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFE---------------LMESDLHQVIKANDD 122
L HP+I+ + + R + +Y+ E ++E+D I +
Sbjct: 72 LGHHPNIINL---LGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 126
Query: 123 LTREHHQF--FLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDT 180
T Q F + R + Y+ HRDL +NIL N K+ DFGL+R
Sbjct: 127 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV 186
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV--LTGKP 229
T+ + RW L +S YT D+WS G + E+ L G P
Sbjct: 187 KKTM---GRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 94/208 (45%), Gaps = 16/208 (7%)
Query: 25 YKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRLLR 80
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVD 77
Query: 81 HPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQMLRA 138
+P + + I L + + ++ +LM L V + D++ ++ + Q+ +
Sbjct: 78 NPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 139 LKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAP 198
+ Y+ + HRDL +N+L +K+ DFG A++ ++ V +W
Sbjct: 132 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 199 ELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 192 SI---LHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEK----VAIKKIHD-----VFEHISD---AIRILREVKL 75
L+V+G G +G V + GE V IK I D F+ ++D AI L +
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 95
Query: 76 LRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQM 135
+RLL + P S + Y+ + S L V + L + + Q+
Sbjct: 96 VRLLG----------LCPGSSLQLVTQYLP---LGSLLDHVRQHRGALGPQLLLNWGVQI 142
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
+ + Y+ + HR+L +N+L + +++V DFG+A + D ++ +W
Sbjct: 143 AKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ F KYT D+WS G E++T
Sbjct: 203 ALESI---HFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 73
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 74 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFG A++ ++ V +W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 188 LESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+G G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 80
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 81 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFG A++ ++ V +W
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 195 LESI---LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 90/221 (40%), Gaps = 39/221 (17%)
Query: 27 ILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLR--LLRHPDI 84
+LE +GKG YG V + GE VA+K +F D RE +L +LRH +I
Sbjct: 12 LLECVGKGRYGEVWRG--SWQGENVAVK----IFSS-RDEKSWFRETELYNTVMLRHENI 64
Query: 85 VEI-----------KRIMLPPSKREFKDIYVVFELMESD----LHQVIKANDDLTREHHQ 129
+ ++ L E +Y +L D L V+ L H +
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 130 FFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARV-AFSDTPMTVFWTD 188
F Q A+ HRDLK KNIL N + + D GLA + + S + V
Sbjct: 125 IFGTQGKPAIA--------HRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNP 176
Query: 189 YVATRWYRAPELCGS-----FFSKYTPAIDIWSIGCIFAEV 224
V T+ Y APE+ F Y +DIW+ G + EV
Sbjct: 177 RVGTKRYMAPEVLDETIQVDCFDSY-KRVDIWAFGLVLWEV 216
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREH 127
+L E +++ L +P IV + I E + +V E+ E L++ ++ N + ++
Sbjct: 418 LLAEANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKDKN 471
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
++Q+ +KY+ +N HRDL +N+L K+ DFGL++ +D T
Sbjct: 472 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 531
Query: 188 -DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+WY APE C +++ K++ D+WS G + E +
Sbjct: 532 HGKWPVKWY-APE-CINYY-KFSSKSDVWSFGVLMWEAFS 568
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 28/211 (13%)
Query: 28 LEVIGKGSYGVVCAAIDTHTGEK----VAIKKIHD-----VFEHISD---AIRILREVKL 75
L+V+G G +G V + GE V IK I D F+ ++D AI L +
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHI 77
Query: 76 LRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQM 135
+RLL + P S + Y+ + S L V + L + + Q+
Sbjct: 78 VRLLG----------LCPGSSLQLVTQYLP---LGSLLDHVRQHRGALGPQLLLNWGVQI 124
Query: 136 LRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWY 195
+ + Y+ + HR+L +N+L + +++V DFG+A + D ++ +W
Sbjct: 125 AKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 196 RAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ F KYT D+WS G E++T
Sbjct: 185 ALESI---HFGKYTHQSDVWSYGVTVWELMT 212
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+ G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 73
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 74 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 127
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 128 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 187
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 188 LESI---LHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 68 RILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDI----YVVFELMES-DLHQVIKANDD 122
R RE + L+ P +V I +F +I YV L+ DL ++
Sbjct: 80 RXQREARTAGRLQEPHVVPIH---------DFGEIDGQLYVDXRLINGVDLAAXLRRQGP 130
Query: 123 LTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPM 182
L + Q+ AL H A HRD+KP+NIL +A+ + DFG+A A +D +
Sbjct: 131 LAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIAS-ATTDEKL 189
Query: 183 TVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPG 233
T + V T +Y APE + Y DI+++ C+ E LTG P + G
Sbjct: 190 TQLG-NTVGTLYYXAPERFSESHATYR--ADIYALTCVLYECLTGSPPYQG 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 37/257 (14%)
Query: 31 IGKGSYGVVCAA-----IDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
+G+G++G V A + VA+K + + E + RE +LL +L+H IV
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLTMLQHQHIV 77
Query: 86 EIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDD---------------LTREHHQ 129
+ E + + +VFE M DL++ ++++ L
Sbjct: 78 RFFGVCT-----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 132
Query: 130 FFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDY 189
Q+ + Y+ + HRDL +N L +K+ DFG++R +S V
Sbjct: 133 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 192
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDL-- 246
+ RW PE + K+T D+WS G + E+ T GK + S +D IT
Sbjct: 193 LPIRWM-PPE--SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE 249
Query: 247 LGTPS---PETIAVVRN 260
L P PE A++R
Sbjct: 250 LERPRACPPEVYAIMRG 266
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 106/257 (41%), Gaps = 37/257 (14%)
Query: 31 IGKGSYGVVCAA-----IDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
+G+G++G V A + VA+K + + E + RE +LL +L+H IV
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLTMLQHQHIV 106
Query: 86 EIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDD---------------LTREHHQ 129
+ E + + +VFE M DL++ ++++ L
Sbjct: 107 RFFGVCT-----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 161
Query: 130 FFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDY 189
Q+ + Y+ + HRDL +N L +K+ DFG++R +S V
Sbjct: 162 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 221
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDL-- 246
+ RW PE + K+T D+WS G + E+ T GK + S +D IT
Sbjct: 222 LPIRWM-PPE--SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE 278
Query: 247 LGTPS---PETIAVVRN 260
L P PE A++R
Sbjct: 279 LERPRACPPEVYAIMRG 295
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 16/210 (7%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKV----AIKKIHDVFEHISDAIRILREVKLLRL 78
+K ++V+ G++G V + GEKV AIK++ + ++ IL E ++
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMAS 80
Query: 79 LRHPDIVEIKRIMLPPSKREFKDIYVVFELMESD--LHQVIKANDDLTREHHQFFLYQML 136
+ +P + + I L + + ++ +LM L V + D++ ++ + Q+
Sbjct: 81 VDNPHVCRLLGICLTST------VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIA 134
Query: 137 RALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
+ + Y+ + HRDL +N+L +K+ DFGLA++ ++ V +W
Sbjct: 135 KGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMA 194
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+ YT D+WS G E++T
Sbjct: 195 LESI---LHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 108/262 (41%), Gaps = 37/262 (14%)
Query: 31 IGKGSYGVVCAA-----IDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIV 85
+G+G++G V A + VA+K + + E + RE +LL +L+H IV
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQ--REAELLTMLQHQHIV 83
Query: 86 EIKRIMLPPSKREFKDIYVVFELM-ESDLHQVIKANDD---------------LTREHHQ 129
+ E + + +VFE M DL++ ++++ L
Sbjct: 84 RFFGVCT-----EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLL 138
Query: 130 FFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDY 189
Q+ + Y+ + HRDL +N L +K+ DFG++R +S V
Sbjct: 139 AVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTM 198
Query: 190 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPGKSVVHQLDLITDL-- 246
+ RW PE + K+T D+WS G + E+ T GK + S +D IT
Sbjct: 199 LPIRWM-PPE--SILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRE 255
Query: 247 LGTPS---PETIAVVRNEKARK 265
L P PE A++R R+
Sbjct: 256 LERPRACPPEVYAIMRGCWQRE 277
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREH 127
+L E +++ L +P IV + I E + +V E+ E L++ ++ N + ++
Sbjct: 417 LLAEANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKDKN 470
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
++Q+ +KY+ +N HRDL +N+L K+ DFGL++ +D T
Sbjct: 471 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQT 530
Query: 188 -DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+WY APE C +++ K++ D+WS G + E +
Sbjct: 531 HGKWPVKWY-APE-CINYY-KFSSKSDVWSFGVLMWEAFS 567
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 27/215 (12%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKI-----HDVFEHISDAIRILREVKLLRLLRHPDIV 85
IGKG +G+V VAIK + E I REV ++ L HP+IV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 86 EIKRIMLPPSKREFKDIYVVFELME-SDL-HQVIKANDDLTREHHQFFLYQMLRALKYMH 143
++ +M P + +V E + DL H+++ + + + ++YM
Sbjct: 87 KLYGLMHNPPR-------MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 144 TAN--VYHRDLKPKNIL-----ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
N + HRDL+ NI NA KV DFG ++ + + + +
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSV------SGLLGNFQWM 193
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
APE G+ YT D +S I +LTG+ F
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 113/258 (43%), Gaps = 36/258 (13%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHPDIVEIKRI 90
IG GS+G V H VA+K ++ EV +LR RH +I+
Sbjct: 20 IGSGSFGTVYKG-KWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 91 MLPPSKREFKDIYVVFELME-SDLHQVIKAND---------DLTREHHQFFLYQMLRALK 140
P + +V + E S L+ + A++ D+ R Q R +
Sbjct: 77 STKP------QLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR--------QTARGMD 122
Query: 141 YMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPEL 200
Y+H ++ HRDLK NI + + +K+ DFGLA V + F + W APE+
Sbjct: 123 YLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWM-APEV 181
Query: 201 CGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLL--GTPSPETIAV 257
S Y+ D+++ G + E++TG+ + S ++ D I +++ G+ SP+ V
Sbjct: 182 IRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY---SNINNRDQIIEMVGRGSLSPDLSKV 238
Query: 258 VRN--EKARKYLTEMRKK 273
N ++ ++ + E KK
Sbjct: 239 RSNCPKRMKRLMAECLKK 256
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 90/224 (40%), Gaps = 14/224 (6%)
Query: 21 DANRYKILEVIGKGSYGVVCAA---IDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLR 77
D N + +++G+G +G V + T KVA+K + + L E ++
Sbjct: 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMK 91
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREHH------QF 130
HP+++ + + + S + V+ M+ DLH + + T H
Sbjct: 92 DFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLK 151
Query: 131 FLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV 190
F+ + ++Y+ N HRDL +N + + + V DFGL++ +S +
Sbjct: 152 FMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKM 211
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+W L YT D+W+ G E+ T G +PG
Sbjct: 212 PVKWIAIESLADRV---YTSKSDVWAFGVTMWEIATRGMTPYPG 252
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +K+ DFGLAR +
Sbjct: 146 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 205
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+W APE + F + YT D+WS G + E+ T G +PG V
Sbjct: 206 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +K+ DFGLAR +
Sbjct: 149 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 208
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+W APE + F + YT D+WS G + E+ T G +PG V
Sbjct: 209 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 250
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +K+ DFGLAR +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+W APE + F + YT D+WS G + E+ T G +PG V
Sbjct: 217 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +K+ DFGLAR +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+W APE + F + YT D+WS G + E+ T G +PG V
Sbjct: 217 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +K+ DFGLAR +
Sbjct: 150 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 209
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+W APE + F + YT D+WS G + E+ T G +PG V
Sbjct: 210 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 251
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +K+ DFGLAR +
Sbjct: 142 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 201
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+W APE + F + YT D+WS G + E+ T G +PG V
Sbjct: 202 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 243
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +K+ DFGLAR +
Sbjct: 157 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 216
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+W APE + F + YT D+WS G + E+ T G +PG V
Sbjct: 217 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 258
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 88/215 (40%), Gaps = 27/215 (12%)
Query: 31 IGKGSYGVVCAAIDTHTGEKVAIKKI-----HDVFEHISDAIRILREVKLLRLLRHPDIV 85
IGKG +G+V VAIK + E I REV ++ L HP+IV
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 86 EIKRIMLPPSKREFKDIYVVFELME-SDL-HQVIKANDDLTREHHQFFLYQMLRALKYMH 143
++ +M P + +V E + DL H+++ + + + ++YM
Sbjct: 87 KLYGLMHNPPR-------MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQ 139
Query: 144 TAN--VYHRDLKPKNIL-----ANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYR 196
N + HRDL+ NI NA KV DF L++ + + + +
Sbjct: 140 NQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSV------SGLLGNFQWM 193
Query: 197 APELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF 231
APE G+ YT D +S I +LTG+ F
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 23/230 (10%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGE-----KVAIKKIHDVFEHISDAIRILREVKLL- 76
N + + +G G++G V A G+ KVA+K + H + ++ E+K++
Sbjct: 46 NNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST-AHADEKEALMSELKIMS 104
Query: 77 RLLRHPDIVEI-------KRIMLPPSKREFKDIYVVFEL-----MESDLHQVIKANDDLT 124
L +H +IV + +++ + D+ +E + + L+
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 125 REHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTV 184
F Q+ + + ++ + N HRD+ +N+L K+ DFGLAR +D+ V
Sbjct: 165 SRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 185 FWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT-GKPLFPG 233
+ +W APE F YT D+WS G + E+ + G +PG
Sbjct: 225 KGNARLPVKW-MAPE--SIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 271
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 98/231 (42%), Gaps = 34/231 (14%)
Query: 21 DANRYKILEVIGKGSYGVVCAAIDTHTGEKV--AIKKIHDVFEHISDAIRILREVKLL-R 77
D N K +VIG+G++G V A G ++ AIK++ + + D E+++L +
Sbjct: 20 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCK 78
Query: 78 LLRHPDIVEIKRIMLPPSKREFKDIYVVFE---------------LMESDLHQVIKANDD 122
L HP+I+ + + R + +Y+ E ++E+D I +
Sbjct: 79 LGHHPNIINL---LGACEHRGY--LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTA 133
Query: 123 LTREHHQF--FLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDT 180
T Q F + R + Y+ HR+L +NIL N K+ DFGL+R
Sbjct: 134 STLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYV 193
Query: 181 PMTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEV--LTGKP 229
T+ + RW L +S YT D+WS G + E+ L G P
Sbjct: 194 KKTM---GRLPVRWMAIESLN---YSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Query: 133 YQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVAT 192
YQ+ R ++Y+ + HRDL +N+L + +K+ DFGLAR +
Sbjct: 198 YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPV 257
Query: 193 RWYRAPELCGSFFSK-YTPAIDIWSIGCIFAEVLT-GKPLFPGKSV 236
+W APE + F + YT D+WS G + E+ T G +PG V
Sbjct: 258 KWM-APE---ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 87/201 (43%), Gaps = 12/201 (5%)
Query: 31 IGKGSYGVVCA----AIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRHPDIV 85
+G+G +G V + TGE VA+K + D + +E+ +LR L H I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWK--QEIDILRTLYHEHII 79
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
+ K + K + +V E + + + F Q+ + Y+H+
Sbjct: 80 KYKGCC---EDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQ 136
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
+ HR+L +N+L + + +K+ DFGLA+ D + ++ APE +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY- 195
Query: 206 SKYTPAIDIWSIGCIFAEVLT 226
K+ A D+WS G E+LT
Sbjct: 196 -KFYYASDVWSFGVTLYELLT 215
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 16/156 (10%)
Query: 75 LLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDD----LTREHHQF 130
L + + D+ E R M P + V L SDL + + L+
Sbjct: 128 LFEYMAYGDLNEFLRSMSP---------HTVCSLSHSDLSTRARVSSPGPPPLSCAEQLC 178
Query: 131 FLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYV 190
Q+ + Y+ HRDL +N L N +K+ DFGL+R +S D +
Sbjct: 179 IARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAI 238
Query: 191 ATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
RW PE F+++YT D+W+ G + E+ +
Sbjct: 239 PIRW-MPPE--SIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREH 127
+L E +++ L +P IV + I E + +V E+ E L++ ++ N + ++
Sbjct: 73 LLAEANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKDKN 126
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
++Q+ +KY+ +N HRDL +N+L K+ DFGL++ +D ++
Sbjct: 127 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---YYK 183
Query: 188 DYVATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+W + APE C +++ K++ D+WS G + E +
Sbjct: 184 AQTHGKWPVKWYAPE-CINYY-KFSSKSDVWSFGVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREH 127
+L E +++ L +P IV + I E + +V E+ E L++ ++ N + ++
Sbjct: 75 LLAEANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
++Q+ +KY+ +N HRDL +N+L K+ DFGL++ +D ++
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---YYK 185
Query: 188 DYVATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+W + APE C +++ K++ D+WS G + E +
Sbjct: 186 AQTHGKWPVKWYAPE-CINYY-KFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREH 127
+L E +++ L +P IV + I E + +V E+ E L++ ++ N + ++
Sbjct: 75 LLAEANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKDKN 128
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
++Q+ +KY+ +N HRDL +N+L K+ DFGL++ +D ++
Sbjct: 129 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---YYK 185
Query: 188 DYVATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+W + APE C +++ K++ D+WS G + E +
Sbjct: 186 AQTHGKWPVKWYAPE-CINYY-KFSSKSDVWSFGVLMWEAFS 225
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREH 127
+L E +++ L +P IV + I E + +V E+ E L++ ++ N + ++
Sbjct: 65 LLAEANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKDKN 118
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
++Q+ +KY+ +N HRDL +N+L K+ DFGL++ +D ++
Sbjct: 119 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---YYK 175
Query: 188 DYVATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+W + APE C +++ K++ D+WS G + E +
Sbjct: 176 AQTHGKWPVKWYAPE-CINYY-KFSSKSDVWSFGVLMWEAFS 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREH 127
+L E +++ L +P IV + I E + +V E+ E L++ ++ N + ++
Sbjct: 59 LLAEANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
++Q+ +KY+ +N HRDL +N+L K+ DFGL++ +D ++
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---YYK 169
Query: 188 DYVATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+W + APE C +++ K++ D+WS G + E +
Sbjct: 170 AQTHGKWPVKWYAPE-CINYY-KFSSKSDVWSFGVLMWEAFS 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 11/160 (6%)
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREH 127
+L E +++ L +P IV + I E + +V E+ E L++ ++ N + ++
Sbjct: 59 LLAEANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKDKN 112
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
++Q+ +KY+ +N HRDL +N+L K+ DFGL++ +D T
Sbjct: 113 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQT 172
Query: 188 -DYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+WY APE C +++ K++ D+WS G + E +
Sbjct: 173 HGKWPVKWY-APE-CINYY-KFSSKSDVWSFGVLMWEAFS 209
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 101/220 (45%), Gaps = 27/220 (12%)
Query: 22 ANRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLR--LL 79
A + ++++ IGKG YG V + GEKVA+K VF +A RE ++ + L+
Sbjct: 36 AKQIQMVKQIGKGRYGEVW--MGKWRGEKVAVK----VFFTTEEA-SWFRETEIYQTVLM 88
Query: 80 RHPDIVEIKRIMLPPSKREFKDIYVVFELMES-DLHQVIKANDDLTREHHQFFLYQMLRA 138
RH +I+ + + + +Y++ + E+ L+ +K+ L + Y +
Sbjct: 89 RHENILGFIAADIKGTG-SWTQLYLITDYHENGSLYDYLKSTT-LDAKSMLKLAYSSVSG 146
Query: 139 LKYMHTA--------NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDT-PMTVFWTDY 189
L ++HT + HRDLK KNIL N + D GLA SDT + +
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 190 VATRWYRAPE-----LCGSFFSKYTPAIDIWSIGCIFAEV 224
V T+ Y PE L + F Y A D++S G I EV
Sbjct: 207 VGTKRYMPPEVLDESLNRNHFQSYIMA-DMYSFGLILWEV 245
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 84/201 (41%), Gaps = 12/201 (5%)
Query: 31 IGKGSYGVVCA----AIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRHPDIV 85
+G+G +G V + TGE VA+K + D + +E+ +LR L H I+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWK--QEIDILRTLYHEHII 96
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
+ K + +V E + + + F Q+ + Y+H
Sbjct: 97 KYKGCCEDAGAASLQ---LVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 153
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
+ HRDL +N+L + + +K+ DFGLA+ D + ++ APE +
Sbjct: 154 HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY- 212
Query: 206 SKYTPAIDIWSIGCIFAEVLT 226
K+ A D+WS G E+LT
Sbjct: 213 -KFYYASDVWSFGVTLYELLT 232
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 31 IGKGSYGVVCAAI----DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRLLRHPDI 84
+G+G +G V + TGE VA+K + E +R RE+++LR L H I
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK---EGCGPQLRSGWQREIEILRTLYHEHI 72
Query: 85 VEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
V+ K ++ + + YV + L + L F Q+ + Y+
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL-----LFAQQICEGMAYL 127
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H + HR L +N+L + + +K+ DFGLA+ D + ++ APE
Sbjct: 128 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT 226
K+ A D+WS G E+LT
Sbjct: 188 E--CKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 31 IGKGSYGVVCAAI----DTHTGEKVAIKKIHDVFEHISDAIR--ILREVKLLRLLRHPDI 84
+G+G +G V + TGE VA+K + E +R RE+++LR L H I
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALK---EGCGPQLRSGWQREIEILRTLYHEHI 73
Query: 85 VEIKRIMLPPSKREFKDI--YVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYM 142
V+ K ++ + + YV + L + L F Q+ + Y+
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLL-----LFAQQICEGMAYL 128
Query: 143 HTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCG 202
H + HR L +N+L + + +K+ DFGLA+ D + ++ APE
Sbjct: 129 HAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 203 SFFSKYTPAIDIWSIGCIFAEVLT 226
K+ A D+WS G E+LT
Sbjct: 189 E--CKFYYASDVWSFGVTLYELLT 210
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 147/366 (40%), Gaps = 79/366 (21%)
Query: 23 NRYKILEVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRILREVKLLRLLRHP 82
RY ++ +G G + V D VA+K + + A L E+KLL+ +R
Sbjct: 31 GRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETA---LDEIKLLKCVRES 87
Query: 83 DIVEIKRIMLPPSKREFK-------DIYVVFELMESDL-HQVIKAN-DDLTREHHQFFLY 133
D + + M+ +FK + +VFE++ L +IK+N L + +
Sbjct: 88 DPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIR 147
Query: 134 QMLRALKYMHT-ANVYHRDLKPKNIL---------------------------ANANCKL 165
Q+L+ L Y+H+ + H D+KP+NIL +A
Sbjct: 148 QVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVSTA 207
Query: 166 KVCDFGLA----------RVAFSDTPMTVF----WTDYVATRWYRAPE-LCGSFFSKYTP 210
D + RV +D + +T+ + TR YR+ E L G+ +S TP
Sbjct: 208 PAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYS--TP 265
Query: 211 AIDIWSIGCIFAEVLTGKPLF---PGKSVVHQLDLIT---DLLGTPSPETIAVVRNEKAR 264
A DIWS C+ E+ TG LF G+ D I +LLG+ P A + + +R
Sbjct: 266 A-DIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGS-IPRHFA-LSGKYSR 322
Query: 265 KY------LTEMRKKPPVPLFQ------KFPNVDPLALR-LLQRLIAFDPKDRPTAEEAL 311
++ L + K P LF +P+ D L ++ P+ R +A E L
Sbjct: 323 EFFNRRGELRHITKLKPWSLFDVLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECL 382
Query: 312 ADPYFK 317
P+
Sbjct: 383 RHPWLN 388
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREH 127
+L E +++ L +P IV + I E + +V E+ E L++ ++ N + ++
Sbjct: 53 LLAEANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKDKN 106
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
++Q+ +KY+ +N HRDL +N+L K+ DFGL++ +D ++
Sbjct: 107 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---YYK 163
Query: 188 DYVATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+W + APE C +++ K++ D+WS G + E +
Sbjct: 164 AQTHGKWPVKWYAPE-CINYY-KFSSKSDVWSFGVLMWEAFS 203
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 86/201 (42%), Gaps = 12/201 (5%)
Query: 31 IGKGSYGVVCA----AIDTHTGEKVAIKKIH-DVFEHISDAIRILREVKLLRLLRHPDIV 85
+G+G +G V + TGE VA+K + D + +E+ +LR L H I+
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWK--QEIDILRTLYHEHII 79
Query: 86 EIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTA 145
+ K + K + +V E + + + F Q+ + Y+H
Sbjct: 80 KYKGCC---EDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ 136
Query: 146 NVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWTDYVATRWYRAPELCGSFF 205
+ HR+L +N+L + + +K+ DFGLA+ D + ++ APE +
Sbjct: 137 HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY- 195
Query: 206 SKYTPAIDIWSIGCIFAEVLT 226
K+ A D+WS G E+LT
Sbjct: 196 -KFYYASDVWSFGVTLYELLT 215
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 26/252 (10%)
Query: 29 EVIGKGSYGVVCAAIDTHTGEKVAIKKIHDVFEHISDAIRI---LREVKLLRLLRHPDIV 85
+++G+G+ V TG+ AIK VF +IS + +RE ++L+ L H +IV
Sbjct: 15 DILGQGATANVFRGRHKKTGDLFAIK----VFNNISFLRPVDVQMREFEVLKKLNHKNIV 70
Query: 86 EIKRIMLPPSKR------EFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRAL 139
++ I + R EF ++ ++E + L L ++ +
Sbjct: 71 KLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAY-----GLPESEFLIVLRDVVGGM 125
Query: 140 KYMHTANVYHRDLKPKNIL----ANANCKLKVCDFGLARVAFSDTPMTVFWT--DYVATR 193
++ + HR++KP NI+ + K+ DFG AR D + +Y+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 194 WYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGK-PLFPGKSVVHQLDLITDLL-GTPS 251
Y L KY +D+WSIG F TG P P + +++ ++ G PS
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPS 245
Query: 252 PETIAVVRNEKA 263
V + E
Sbjct: 246 GAISGVQKAENG 257
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 69 ILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELME-SDLHQVIKANDDLTREH 127
+L E +++ L +P IV + I E + +V E+ E L++ ++ N + ++
Sbjct: 55 LLAEANVMQQLDNPYIVRMIGIC------EAESWMLVMEMAELGPLNKYLQQNRHVKDKN 108
Query: 128 HQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFSDTPMTVFWT 187
++Q+ +KY+ +N HRDL +N+L K+ DFGL++ +D ++
Sbjct: 109 IIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN---YYK 165
Query: 188 DYVATRW---YRAPELCGSFFSKYTPAIDIWSIGCIFAEVLT 226
+W + APE C +++ K++ D+WS G + E +
Sbjct: 166 AQTHGKWPVKWYAPE-CINYY-KFSSKSDVWSFGVLMWEAFS 205
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,574,492
Number of Sequences: 62578
Number of extensions: 490290
Number of successful extensions: 4488
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1065
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 1053
Number of HSP's gapped (non-prelim): 1264
length of query: 374
length of database: 14,973,337
effective HSP length: 100
effective length of query: 274
effective length of database: 8,715,537
effective search space: 2388057138
effective search space used: 2388057138
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)