Query 017303
Match_columns 374
No_of_seqs 320 out of 2410
Neff 6.7
Searched_HMMs 46136
Date Fri Mar 29 07:22:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017303.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017303hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd07418 MPP_PP7 PP7, metalloph 100.0 1.6E-66 3.5E-71 514.3 30.4 304 50-354 1-377 (377)
2 KOG0372 Serine/threonine speci 100.0 1E-62 2.2E-67 451.2 13.6 234 83-348 15-290 (303)
3 cd07420 MPP_RdgC Drosophila me 100.0 3.9E-59 8.4E-64 455.0 26.5 252 56-341 2-321 (321)
4 cd07417 MPP_PP5_C PP5, C-termi 100.0 3.9E-58 8.4E-63 448.3 24.4 267 45-352 3-312 (316)
5 KOG0373 Serine/threonine speci 100.0 2.3E-57 4.9E-62 410.3 14.0 240 82-352 17-298 (306)
6 cd07416 MPP_PP2B PP2B, metallo 100.0 7.7E-55 1.7E-59 423.8 24.9 238 83-351 15-304 (305)
7 KOG0374 Serine/threonine speci 100.0 3.9E-55 8.4E-60 427.8 20.3 229 83-343 31-303 (331)
8 PTZ00239 serine/threonine prot 100.0 2.9E-54 6.2E-59 418.6 25.3 232 83-345 15-288 (303)
9 cd07415 MPP_PP2A_PP4_PP6 PP2A, 100.0 1.7E-54 3.8E-59 417.5 23.6 229 83-343 14-284 (285)
10 PTZ00480 serine/threonine-prot 100.0 1.3E-53 2.8E-58 415.7 24.7 228 83-343 31-301 (320)
11 PTZ00244 serine/threonine-prot 100.0 2.1E-53 4.7E-58 411.1 24.3 246 58-342 5-293 (294)
12 cd07414 MPP_PP1_PPKL PP1, PPKL 100.0 6.6E-53 1.4E-57 408.0 22.6 228 82-342 21-291 (293)
13 KOG0377 Protein serine/threoni 100.0 3.7E-54 8E-59 420.1 10.0 278 44-360 108-448 (631)
14 smart00156 PP2Ac Protein phosp 100.0 3.1E-52 6.8E-57 399.7 23.0 226 85-343 2-270 (271)
15 cd07419 MPP_Bsu1_C Arabidopsis 100.0 4.8E-51 1E-55 398.4 22.2 236 78-341 15-310 (311)
16 KOG0375 Serine-threonine phosp 100.0 6.7E-50 1.5E-54 382.6 10.9 239 83-352 60-350 (517)
17 KOG0371 Serine/threonine prote 100.0 1.6E-49 3.5E-54 366.4 11.1 229 83-343 32-302 (319)
18 KOG0376 Serine-threonine phosp 100.0 4.8E-46 1E-50 370.2 10.5 260 55-352 164-466 (476)
19 cd00144 MPP_PPP_family phospho 99.9 1.2E-25 2.7E-30 208.2 16.0 185 119-326 1-224 (225)
20 PRK11439 pphA serine/threonine 99.9 4.8E-25 1E-29 205.3 11.4 185 106-302 8-215 (218)
21 PRK13625 bis(5'-nucleosyl)-tet 99.9 4.1E-25 8.8E-30 209.3 10.0 173 116-290 1-213 (245)
22 cd07413 MPP_PA3087 Pseudomonas 99.9 7.2E-24 1.6E-28 198.0 12.0 174 119-304 2-216 (222)
23 cd07423 MPP_PrpE Bacillus subt 99.9 1E-23 2.2E-28 198.3 11.5 170 116-288 1-208 (234)
24 cd07421 MPP_Rhilphs Rhilph pho 99.9 1.7E-22 3.7E-27 194.0 11.8 183 117-309 3-295 (304)
25 PRK09968 serine/threonine-spec 99.9 2.5E-22 5.5E-27 187.1 11.4 186 105-302 5-215 (218)
26 cd07424 MPP_PrpA_PrpB PrpA and 99.9 6.9E-22 1.5E-26 182.4 12.0 176 116-302 1-204 (207)
27 cd07425 MPP_Shelphs Shewanella 99.9 7E-22 1.5E-26 182.9 11.1 172 119-305 1-196 (208)
28 PHA02239 putative protein phos 99.9 6.5E-22 1.4E-26 186.4 9.8 169 116-290 1-221 (235)
29 PRK00166 apaH diadenosine tetr 99.8 4.3E-21 9.4E-26 184.6 11.4 107 116-228 1-111 (275)
30 TIGR00668 apaH bis(5'-nucleosy 99.8 6.1E-21 1.3E-25 182.8 12.3 106 116-228 1-111 (279)
31 cd07422 MPP_ApaH Escherichia c 99.8 2.8E-20 6.1E-25 177.3 10.9 105 118-228 1-109 (257)
32 KOG0376 Serine-threonine phosp 99.4 1.3E-14 2.9E-19 145.7 -3.3 279 80-361 11-351 (476)
33 PF00149 Metallophos: Calcineu 99.1 5E-11 1.1E-15 100.9 5.6 76 116-192 1-82 (200)
34 cd00841 MPP_YfcE Escherichia c 99.1 1.4E-09 3.1E-14 95.0 14.0 60 117-189 1-60 (155)
35 PF12850 Metallophos_2: Calcin 99.0 1.2E-08 2.6E-13 88.3 13.0 61 116-189 1-61 (156)
36 TIGR00040 yfcE phosphoesterase 99.0 1.2E-08 2.7E-13 89.9 13.1 63 116-188 1-64 (158)
37 PRK09453 phosphodiesterase; Pr 98.9 2.7E-09 5.8E-14 96.4 7.3 69 116-189 1-77 (182)
38 cd07379 MPP_239FB Homo sapiens 98.8 1.2E-07 2.6E-12 81.4 12.5 112 117-271 1-114 (135)
39 cd07404 MPP_MS158 Microscilla 98.7 7.2E-08 1.6E-12 85.4 10.0 67 118-188 1-68 (166)
40 cd07394 MPP_Vps29 Homo sapiens 98.6 1.1E-06 2.3E-11 79.7 13.5 59 117-188 1-65 (178)
41 cd07388 MPP_Tt1561 Thermus the 98.5 2.2E-07 4.8E-12 87.2 7.7 71 116-188 5-75 (224)
42 cd07392 MPP_PAE1087 Pyrobaculu 98.5 2.9E-07 6.2E-12 82.2 8.0 66 118-190 1-67 (188)
43 cd00838 MPP_superfamily metall 98.5 9.4E-07 2E-11 72.7 10.3 67 119-186 1-69 (131)
44 cd07397 MPP_DevT Myxococcus xa 98.4 4.1E-06 8.8E-11 79.3 12.0 62 117-189 2-64 (238)
45 cd07400 MPP_YydB Bacillus subt 98.3 6.3E-06 1.4E-10 71.0 11.1 110 118-271 1-123 (144)
46 cd07399 MPP_YvnB Bacillus subt 98.3 5.1E-05 1.1E-09 70.4 17.0 145 117-272 2-160 (214)
47 COG0622 Predicted phosphoester 98.2 4.2E-05 9.1E-10 69.0 13.9 162 116-341 2-164 (172)
48 cd07403 MPP_TTHA0053 Thermus t 98.2 1.5E-05 3.3E-10 68.2 9.8 101 119-272 1-102 (129)
49 cd07385 MPP_YkuE_C Bacillus su 98.1 5E-06 1.1E-10 76.7 6.5 71 116-189 2-77 (223)
50 PRK11340 phosphodiesterase Yae 98.0 1.2E-05 2.5E-10 77.5 7.5 72 114-188 48-125 (271)
51 PRK05340 UDP-2,3-diacylglucosa 97.9 2E-05 4.4E-10 74.3 5.9 70 116-188 1-83 (241)
52 cd07383 MPP_Dcr2 Saccharomyces 97.8 0.00019 4E-09 65.6 10.6 70 116-186 3-87 (199)
53 TIGR03729 acc_ester putative p 97.8 5.7E-05 1.2E-09 71.1 6.7 68 117-188 1-74 (239)
54 cd07396 MPP_Nbla03831 Homo sap 97.6 0.00016 3.4E-09 69.3 7.6 73 117-190 2-88 (267)
55 cd00840 MPP_Mre11_N Mre11 nucl 97.6 0.00011 2.3E-09 67.4 5.9 74 117-191 1-92 (223)
56 cd07395 MPP_CSTP1 Homo sapiens 97.6 0.0035 7.5E-08 59.6 16.3 72 117-188 6-99 (262)
57 cd08165 MPP_MPPE1 human MPPE1 97.6 0.00054 1.2E-08 60.6 9.7 44 146-189 41-90 (156)
58 PHA02546 47 endonuclease subun 97.6 0.00013 2.8E-09 72.6 6.2 73 116-189 1-90 (340)
59 TIGR00619 sbcd exonuclease Sbc 97.5 0.00027 5.8E-09 67.5 6.8 73 116-189 1-89 (253)
60 PF08321 PPP5: PPP5 TPR repeat 97.4 0.00034 7.5E-09 57.0 5.9 46 54-109 50-95 (95)
61 cd07402 MPP_GpdQ Enterobacter 97.4 0.0005 1.1E-08 64.0 7.4 67 117-188 1-83 (240)
62 cd07391 MPP_PF1019 Pyrococcus 97.4 0.00034 7.3E-09 62.6 5.9 58 131-189 30-89 (172)
63 cd07401 MPP_TMEM62_N Homo sapi 97.4 0.002 4.4E-08 61.4 11.6 71 118-189 2-90 (256)
64 PRK11148 cyclic 3',5'-adenosin 97.3 0.0006 1.3E-08 65.6 7.8 72 114-188 13-98 (275)
65 cd00844 MPP_Dbr1_N Dbr1 RNA la 97.3 0.00054 1.2E-08 65.9 7.0 69 118-188 1-86 (262)
66 TIGR01854 lipid_A_lpxH UDP-2,3 97.3 0.0004 8.6E-09 65.2 6.0 67 119-188 2-81 (231)
67 cd07384 MPP_Cdc1_like Saccharo 97.3 0.0023 5E-08 57.5 10.1 44 146-189 48-101 (171)
68 PRK10966 exonuclease subunit S 97.3 0.00057 1.2E-08 69.7 6.7 72 116-189 1-88 (407)
69 cd07380 MPP_CWF19_N Schizosacc 97.3 0.0046 1E-07 54.6 11.6 116 119-271 1-120 (150)
70 cd08163 MPP_Cdc1 Saccharomyces 97.2 0.0058 1.3E-07 58.6 12.9 32 248-293 203-234 (257)
71 TIGR00024 SbcD_rel_arch putati 97.1 0.0013 2.9E-08 61.8 6.9 68 117-189 16-103 (225)
72 cd07390 MPP_AQ1575 Aquifex aeo 97.0 0.001 2.3E-08 59.2 5.6 40 145-189 44-83 (168)
73 TIGR00583 mre11 DNA repair pro 97.0 0.0018 3.9E-08 66.0 7.8 55 114-169 2-68 (405)
74 cd07393 MPP_DR1119 Deinococcus 97.0 0.0018 3.8E-08 60.9 6.5 65 118-187 1-83 (232)
75 cd08166 MPP_Cdc1_like_1 unchar 96.9 0.0052 1.1E-07 56.6 9.2 94 147-271 46-145 (195)
76 PRK04036 DNA polymerase II sma 96.9 0.002 4.4E-08 67.5 7.4 74 114-189 242-344 (504)
77 COG2129 Predicted phosphoester 96.9 0.012 2.6E-07 55.0 11.4 74 115-190 3-79 (226)
78 cd00839 MPP_PAPs purple acid p 96.8 0.0027 5.9E-08 61.0 6.7 69 116-189 5-82 (294)
79 COG1409 Icc Predicted phosphoh 96.8 0.004 8.7E-08 59.0 7.7 74 116-191 1-81 (301)
80 cd07398 MPP_YbbF-LpxH Escheric 96.8 0.0022 4.7E-08 58.8 5.5 69 119-189 1-83 (217)
81 cd00845 MPP_UshA_N_like Escher 96.6 0.0034 7.3E-08 59.2 5.8 66 117-187 2-81 (252)
82 cd07386 MPP_DNA_pol_II_small_a 96.6 0.0036 7.9E-08 59.0 5.5 69 119-189 2-95 (243)
83 COG4186 Predicted phosphoester 96.5 0.02 4.4E-07 50.7 9.4 69 117-190 5-88 (186)
84 COG0420 SbcD DNA repair exonuc 96.3 0.0074 1.6E-07 60.9 6.5 76 116-192 1-92 (390)
85 COG1408 Predicted phosphohydro 96.2 0.012 2.5E-07 57.4 6.8 74 114-190 43-120 (284)
86 KOG3662 Cell division control 96.1 0.018 3.9E-07 58.4 7.9 74 114-187 47-143 (410)
87 cd08164 MPP_Ted1 Saccharomyces 95.7 0.019 4.1E-07 52.8 5.6 67 123-189 24-112 (193)
88 PLN02533 probable purple acid 95.3 0.025 5.3E-07 58.2 5.3 70 116-189 140-212 (427)
89 cd07410 MPP_CpdB_N Escherichia 95.3 0.026 5.7E-07 54.2 5.1 66 117-187 2-94 (277)
90 COG1407 Predicted ICC-like pho 95.2 0.053 1.2E-06 51.2 6.7 76 116-195 20-117 (235)
91 cd07412 MPP_YhcR_N Bacillus su 94.5 0.05 1.1E-06 52.8 4.9 66 117-187 2-87 (288)
92 PF14582 Metallophos_3: Metall 94.5 0.053 1.1E-06 51.0 4.5 72 116-188 6-102 (255)
93 COG0639 ApaH Diadenosine tetra 94.0 0.052 1.1E-06 45.3 3.4 53 241-309 102-154 (155)
94 cd07378 MPP_ACP5 Homo sapiens 93.9 0.15 3.2E-06 48.6 6.5 69 117-188 2-83 (277)
95 KOG3325 Membrane coat complex 93.8 0.66 1.4E-05 40.9 9.8 62 117-187 2-65 (183)
96 cd07408 MPP_SA0022_N Staphyloc 93.8 0.11 2.5E-06 49.3 5.7 65 117-187 2-81 (257)
97 cd07411 MPP_SoxB_N Thermus the 93.8 0.12 2.7E-06 49.3 5.8 66 117-188 2-95 (264)
98 TIGR00282 metallophosphoestera 92.6 0.25 5.5E-06 47.7 6.0 68 116-188 1-71 (266)
99 COG2908 Uncharacterized protei 91.9 0.34 7.4E-06 45.8 5.8 66 120-188 2-80 (237)
100 cd07409 MPP_CD73_N CD73 ecto-5 90.8 0.52 1.1E-05 45.6 6.0 67 117-188 2-94 (281)
101 PRK09419 bifunctional 2',3'-cy 89.7 0.5 1.1E-05 54.6 5.6 67 116-187 661-735 (1163)
102 cd07406 MPP_CG11883_N Drosophi 89.2 0.76 1.6E-05 43.8 5.6 57 126-187 21-82 (257)
103 COG1768 Predicted phosphohydro 88.0 1 2.2E-05 41.2 5.2 42 144-189 44-87 (230)
104 cd00842 MPP_ASMase acid sphing 86.0 1.3 2.8E-05 42.7 5.2 71 119-191 41-125 (296)
105 cd07407 MPP_YHR202W_N Saccharo 85.9 1 2.2E-05 43.8 4.4 67 117-188 7-97 (282)
106 PF06874 FBPase_2: Firmicute f 85.6 0.47 1E-05 50.5 2.0 42 147-193 188-229 (640)
107 cd07382 MPP_DR1281 Deinococcus 84.7 2.3 4.9E-05 40.8 6.1 67 117-188 1-70 (255)
108 cd07405 MPP_UshA_N Escherichia 83.7 1.4 3E-05 42.8 4.2 67 117-188 2-87 (285)
109 cd08162 MPP_PhoA_N Synechococc 82.7 2.1 4.6E-05 42.2 5.2 66 117-187 2-90 (313)
110 PRK09420 cpdB bifunctional 2', 82.2 2.1 4.4E-05 46.6 5.2 66 117-187 27-121 (649)
111 KOG2863 RNA lariat debranching 81.1 2.4 5.1E-05 42.6 4.7 73 116-189 1-89 (456)
112 TIGR01390 CycNucDiestase 2',3' 80.3 2.5 5.5E-05 45.7 5.1 66 117-187 4-98 (626)
113 PF04042 DNA_pol_E_B: DNA poly 79.8 3.4 7.3E-05 37.7 5.1 72 118-190 1-93 (209)
114 COG0737 UshA 5'-nucleotidase/2 79.7 2.5 5.5E-05 44.4 4.8 67 117-188 28-115 (517)
115 KOG1378 Purple acid phosphatas 79.0 15 0.00033 38.0 9.9 72 115-191 147-224 (452)
116 PRK09419 bifunctional 2',3'-cy 76.9 3.3 7.2E-05 48.0 5.1 66 117-187 43-138 (1163)
117 PRK11907 bifunctional 2',3'-cy 76.5 4.1 8.9E-05 45.4 5.4 66 117-187 117-212 (814)
118 TIGR01530 nadN NAD pyrophospha 75.9 5.3 0.00012 42.5 5.9 66 117-187 2-93 (550)
119 KOG2476 Uncharacterized conser 75.8 7.8 0.00017 40.1 6.7 69 116-185 6-75 (528)
120 PTZ00422 glideosome-associated 75.1 4.9 0.00011 41.0 5.1 69 117-188 28-109 (394)
121 COG3855 Fbp Uncharacterized pr 74.7 2.5 5.4E-05 43.7 2.9 44 147-195 194-237 (648)
122 KOG1432 Predicted DNA repair e 71.8 11 0.00024 37.7 6.5 43 146-189 103-148 (379)
123 KOG3947 Phosphoesterases [Gene 66.0 10 0.00022 36.9 4.8 68 113-189 59-127 (305)
124 PRK09418 bifunctional 2',3'-cy 65.1 10 0.00022 42.2 5.3 66 117-187 41-141 (780)
125 COG1311 HYS2 Archaeal DNA poly 64.6 16 0.00035 38.1 6.2 77 115-191 225-324 (481)
126 PRK09558 ushA bifunctional UDP 64.2 8.2 0.00018 40.9 4.3 66 117-187 36-120 (551)
127 PTZ00235 DNA polymerase epsilo 59.4 32 0.0007 33.7 7.0 76 113-188 25-122 (291)
128 KOG2310 DNA repair exonuclease 51.7 40 0.00088 35.8 6.6 53 114-167 12-76 (646)
129 KOG2679 Purple (tartrate-resis 51.7 17 0.00036 35.5 3.6 71 114-188 42-126 (336)
130 PF02875 Mur_ligase_C: Mur lig 46.3 40 0.00087 26.3 4.6 69 117-185 13-82 (91)
131 cd07387 MPP_PolD2_C PolD2 (DNA 45.3 60 0.0013 31.2 6.3 67 118-186 2-105 (257)
132 PRK05340 UDP-2,3-diacylglucosa 32.8 1.4E+02 0.0031 27.7 6.8 24 249-272 175-198 (241)
133 TIGR01854 lipid_A_lpxH UDP-2,3 30.9 1.5E+02 0.0032 27.4 6.5 24 249-272 173-196 (231)
134 PF06874 FBPase_2: Firmicute f 28.6 49 0.0011 35.8 3.0 23 115-137 32-54 (640)
135 COG2908 Uncharacterized protei 28.4 58 0.0013 31.0 3.2 26 250-275 176-201 (237)
136 KOG3339 Predicted glycosyltran 26.1 93 0.002 28.7 3.9 79 146-232 41-135 (211)
137 PF13258 DUF4049: Domain of un 25.6 2.8E+02 0.0061 26.7 7.1 40 87-127 58-97 (318)
138 cd03822 GT1_ecORF704_like This 25.4 4.4E+02 0.0095 24.6 8.9 57 117-186 218-278 (366)
139 cd07398 MPP_YbbF-LpxH Escheric 23.7 71 0.0015 28.7 2.9 23 250-272 178-200 (217)
140 TIGR00282 metallophosphoestera 22.5 58 0.0013 31.5 2.1 39 146-188 2-41 (266)
141 PF00403 HMA: Heavy-metal-asso 21.8 3E+02 0.0064 19.4 6.4 47 94-140 14-61 (62)
142 COG4320 Uncharacterized protei 21.8 55 0.0012 32.7 1.8 61 98-171 44-107 (410)
143 COG0281 SfcA Malic enzyme [Ene 21.3 1.4E+02 0.003 31.0 4.5 55 122-181 173-231 (432)
144 COG1692 Calcineurin-like phosp 21.3 2.5E+02 0.0053 27.2 5.9 67 116-187 1-70 (266)
No 1
>cd07418 MPP_PP7 PP7, metallophosphatase domain. PP7 is a plant phosphoprotein phosphatase that is highly expressed in a subset of stomata and thought to play an important role in sensory signaling. PP7 acts as a positive regulator of signaling downstream of cryptochrome blue light photoreceptors. PP7 also controls amplification of phytochrome signaling, and interacts with nucleotidediphosphate kinase 2 (NDPK2), a positive regulator of phytochrome signalling. In addition, PP7 interacts with heat shock transcription factor HSF and up-regulates protective heat shock proteins. PP7 may also play a role in salicylic acid-dependent defense signaling. The PPP (phosphoprotein phosphatase) family, to which PP7 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-,
Probab=100.00 E-value=1.6e-66 Score=514.25 Aligned_cols=304 Identities=76% Similarity=1.339 Sum_probs=278.9
Q ss_pred CCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHH
Q 017303 50 YPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLH 129 (374)
Q Consensus 50 ~p~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~ 129 (374)
||+.+.||.+|+++||+.|++..+++.+.++...++.+++.+||.+|+++|++||++++|+. +...+++||||||||+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~a~~il~~ep~ll~i~~-~~~~~i~VvGDIHG~~~ 79 (377)
T cd07418 1 WPDGGALTNEWVHELMSVFEWSSRNLPPSELPSVLPVNVFDSLVLTAHKILHREPNCVRIDV-EDVCEVVVVGDVHGQLH 79 (377)
T ss_pred CCCCCccCHHHHHHHHHHHHhcccccCchhhccCCCHHHHHHHHHHHHHHHHhCCCeEEecC-CCCCCEEEEEecCCCHH
Confidence 78888999999999999999999999999999999999999999999999999999999985 44459999999999999
Q ss_pred HHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccch
Q 017303 130 DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGK 209 (374)
Q Consensus 130 dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~ 209 (374)
+|.++|+.+|+++.++.|||||||||||++|+||+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+..+.
T Consensus 80 dL~~ll~~~g~~~~~~~ylFLGDyVDRGp~SlEvl~lL~~lki~~p~~v~lLRGNHE~~~i~~~~Gf~~E~~~~y~~~~~ 159 (377)
T cd07418 80 DVLFLLEDAGFPDQNRFYVFNGDYVDRGAWGLETFLLLLSWKVLLPDRVYLLRGNHESKFCTSMYGFEQEVLTKYGDKGK 159 (377)
T ss_pred HHHHHHHHhCCCCCCceEEEeccccCCCCChHHHHHHHHHHhhccCCeEEEEeeecccccchhhcccchhhhhhcCchHH
Confidence 99999999999877767999999999999999999999999999999999999999999999999999999999987667
Q ss_pred hhhhhcccccCCCcceEEE-------ccCc--------------------------------------------------
Q 017303 210 HAYRKCLGCFEGLPLASLI-------DPSM-------------------------------------------------- 232 (374)
Q Consensus 210 ~l~~~~~~~f~~LPlaaii-------dp~~-------------------------------------------------- 232 (374)
.+|+.++++|++||++++| |.+.
T Consensus 160 ~l~~~~~~~f~~LPlaavI~~~i~cvHGGI~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~sl~~i~~i~r~~~~~~~~ 239 (377)
T cd07418 160 HVYRKCLGCFEGLPLASIIAGRVYTAHGGLFRSPSLPKRKKQKGKNRRVLLLEPESESLKLGTLDDLMKARRSVLDPPGE 239 (377)
T ss_pred HHHHHHHHHHHhCCcEEEECCCEEEECCCcCCcccccccccccccccccccccccccCCCCCCHHHHhhCCCCCCCCCCC
Confidence 8999999999999999988 1110
Q ss_pred ----------------cCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCC
Q 017303 233 ----------------KLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVES 296 (374)
Q Consensus 233 ----------------~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~ 296 (374)
..|+.++++||.|++||++++++||++|++++||||||++++++++.++..+.+||++.|...+
T Consensus 240 ~~~~i~~dlLWSDP~~~~g~~~~~~RG~g~~FG~~~~~~FL~~n~l~~IIRsHe~~~~~~~~~~~~~v~~Gy~~~~~~~~ 319 (377)
T cd07418 240 GSNLIPGDVLWSDPSLTPGLSPNKQRGIGLLWGPDCTEEFLEKNNLKLIIRSHEGPDAREKRPGLAGMNKGYTVDHDVES 319 (377)
T ss_pred CccccceeeEeeCCccCCCCCccCCCCCccccCHHHHHHHHHHcCCcEEEECCCCcccccccccchhhhCceEEeccCCC
Confidence 1123344579999999999999999999999999999999999999999899999999875567
Q ss_pred CeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEecCCCCCCCCccc
Q 017303 297 GMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPFYD 354 (374)
Q Consensus 297 g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~~~~~~~~~~~~ 354 (374)
|+|+|||||||||+++.+++.++|+||+++++.+++..|+|.+|++++|||+..|||+
T Consensus 320 ~~liTvFSa~nY~~~~~~~~~~~N~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (377)
T cd07418 320 GKLITLFSAPDYPQFQATEERYNNKGAYIILQPPDFSDPQFHTFEAVKPRPKANPYYD 377 (377)
T ss_pred CcEEEEecCCccccccccccccCcceEEEEEecCCCCCccceEeeccCCCCCCCcCCC
Confidence 9999999999999877777789999999999998888999999999999999999985
No 2
>KOG0372 consensus Serine/threonine specific protein phosphatase involved in glycogen accumulation, PP2A-related [Carbohydrate transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1e-62 Score=451.16 Aligned_cols=234 Identities=41% Similarity=0.639 Sum_probs=220.2
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHH
Q 017303 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (374)
Q Consensus 83 ~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (374)
.+++.++..||.+++++|.+|+|++.++. |++|||||||||+||+.+|+..|-++.++ |+|||||||||-+|+|
T Consensus 15 li~E~eV~~LC~~~~eiL~~E~NV~~i~t-----PvtvcGDIHGQf~Dllelf~igG~~~~t~-YLFLGDyVDRG~~SvE 88 (303)
T KOG0372|consen 15 LIAESEVKALCAKVREILVEESNVQRIDT-----PVTVCGDIHGQFYDLLELFRIGGDVPETN-YLFLGDYVDRGYYSVE 88 (303)
T ss_pred CCcHHHHHHHHHHHHHHHhcCCCceecCC-----CcEEeecccchHHHHHHHHHhCCCCCCCc-eEeecchhccccchHH
Confidence 67899999999999999999999999998 99999999999999999999999998887 9999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE--------------
Q 017303 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI-------------- 228 (374)
Q Consensus 163 vl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-------------- 228 (374)
++.+|++||++||++|.+||||||++.+++.|||++||.+|||.. .+|+.+.+.|+.||++|+|
T Consensus 89 t~lLLl~lK~rYP~ritLiRGNHEsRqitqvYGFY~EclrKYG~~--~vWr~c~eiFdyL~l~aiid~kifCVHGGlSP~ 166 (303)
T KOG0372|consen 89 TFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSA--NVWRYCTEIFDYLSLAAIIDGKIFCVHGGLSPS 166 (303)
T ss_pred HHHHHHHHhhcCcceeEEeeccchhhhhhhhhhHHHHHHHHcCCh--HHHHHHHHHHHhhhHhheecCcEEEEcCCCCcc
Confidence 999999999999999999999999999999999999999999964 9999999999999999999
Q ss_pred ----------------------------ccCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCC
Q 017303 229 ----------------------------DPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPD 280 (374)
Q Consensus 229 ----------------------------dp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~ 280 (374)
||...+||..+ +||+|++||.++++.|++.||+..|+|+||-
T Consensus 167 i~~lDqIr~lDR~~Eiph~g~m~DllWSDPee~~g~~~S-PRGaGylFG~dvv~~F~~~N~~~~I~RaHQL--------- 236 (303)
T KOG0372|consen 167 IQTLDQIRVLDRKQEVPHDGAMCDLLWSDPEEGPGWGLS-PRGAGYLFGEDVVESFLEANGLSLICRAHQL--------- 236 (303)
T ss_pred hhhHHHHHHhhccccCCCCCcchheeccCcccCCCcccC-CCCccccccHHHHHHHHHhCChHHHHHHHHH---------
Confidence 77777788764 8999999999999999999999999999995
Q ss_pred cccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEecCCCCC
Q 017303 281 LAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPD 348 (374)
Q Consensus 281 ~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~~~~~~ 348 (374)
+.+||.+++ +++++||||||||| ++++|.||||.|+.+ ....|..|++.+.+.+
T Consensus 237 ---v~eGyk~~F---~~~v~TVWSAPNYC------YrCGN~AsIl~lde~--~~~~F~vFeaa~~~~~ 290 (303)
T KOG0372|consen 237 ---VMEGYKWHF---DEKVVTVWSAPNYC------YRCGNVAAILELDED--LDKDFRVFEAAPQESR 290 (303)
T ss_pred ---HHhhHHHhc---CCceEEEecCCchh------hhcCChHHheeeccc--cCcceEeeecchhhhc
Confidence 789999966 69999999999999 899999999999976 5778999999875444
No 3
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain. RdgC (retinal degeneration C) is a vertebrate serine-threonine protein phosphatase that is required to prevent light-induced retinal degeneration. In addition to its catalytic domain, RdgC has two C-terminal EF hands. Homologs of RdgC include the human phosphatases protein phosphatase with EF hands 1 and -2 (PPEF-1 and -2). PPEF-1 transcripts are present at low levels in the retina, PPEF-2 transcripts and PPEF-2 protein are present at high levels in photoreceptors. The PPP (phosphoprotein phosphatase) family, to which RdgC belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all
Probab=100.00 E-value=3.9e-59 Score=454.97 Aligned_cols=252 Identities=39% Similarity=0.632 Sum_probs=225.0
Q ss_pred CCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHH
Q 017303 56 LTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLL 135 (374)
Q Consensus 56 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll 135 (374)
||.+.++.+++.+... ..++.+++.+||++|+++|++||++++|++ +..++++||||||||+.+|.++|
T Consensus 2 ~~~~~~~~~i~~~~~~----------~~l~~~~i~~L~~~a~~il~~ep~vl~i~~-~~~~~~~vvGDiHG~~~dL~~il 70 (321)
T cd07420 2 LTKDHIDALIEAFKEK----------QLLHAKYVLLILREARKVLKQLPNISRVST-SISKQVTICGDLHGKLDDLFLIF 70 (321)
T ss_pred CCHHHHHHHHHHHHcc----------CCCCHHHHHHHHHHHHHHHHhCCCEEEecC-CCCCCeEEEEeCCCCHHHHHHHH
Confidence 8899999999988643 257899999999999999999999999986 55679999999999999999999
Q ss_pred HHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhc
Q 017303 136 RDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKC 215 (374)
Q Consensus 136 ~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~ 215 (374)
+..|+++.+++|||||||||||++|+||+.+|++||+.+|+++++||||||.+.++..|||.+||..+|+..+..+|+.+
T Consensus 71 ~~~g~~~~~~~~lFLGDyVDRG~~s~Evl~ll~~lk~~~p~~v~llRGNHE~~~~~~~yGf~~e~~~~y~~~~~~l~~~~ 150 (321)
T cd07420 71 YKNGLPSPENPYVFNGDFVDRGKRSIEILIILFAFFLVYPNEVHLNRGNHEDHIMNLRYGFTKEVMSKYKLHGKKILRLL 150 (321)
T ss_pred HHcCCCCccceEEEeccccCCCCCcHHHHHHHHHHhhcCCCcEEEecCchhhhhhhhhcChHHHHHHHhCccHHHHHHHH
Confidence 99999876667999999999999999999999999999999999999999999999999999999999987667899999
Q ss_pred ccccCCCcceEEEc---------------------------------cCc------------------------------
Q 017303 216 LGCFEGLPLASLID---------------------------------PSM------------------------------ 232 (374)
Q Consensus 216 ~~~f~~LPlaaiid---------------------------------p~~------------------------------ 232 (374)
.++|++||+||+|+ |..
T Consensus 151 ~~~F~~LPlaaii~~~i~cvHGGi~~~~~l~~i~~i~r~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~dlLW 230 (321)
T cd07420 151 EDVFSWLPLATIIDNKILVVHGGISDSTDLDLLDKIDRHKYVSVLRPPLRKGMEELTGEEEDPSEPLDKTEWRQILDILW 230 (321)
T ss_pred HHHHHhCCceEEEcCCEEEEeCCCCCccCHHHHHhhhccccccccCCCccccccccccccccccccccccccchhheeee
Confidence 99999999999980 110
Q ss_pred -----cCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEEEeCCC
Q 017303 233 -----KLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPD 307 (374)
Q Consensus 233 -----~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSapn 307 (374)
..+...+++||.|++||++++++||++|++++||||||+ +.+||++.| +|+|+|||||||
T Consensus 231 SDP~~~~~~~~~~~RG~g~~FG~~~~~~Fl~~n~l~~IIR~He~------------v~~G~~~~~---~~~~iTvFSa~n 295 (321)
T cd07420 231 SDPKAQKGCKPNTFRGGGCYFGPDVTSKVLQKHGLSLLIRSHEC------------KPEGYEFCH---NNKVITIFSASN 295 (321)
T ss_pred cCCccCCCCCccCCCCCccccCHHHHHHHHHHCCCcEEEEcChh------------hhcceEEec---CCeEEEEecCCc
Confidence 012223457999999999999999999999999999997 689999866 699999999999
Q ss_pred CCCccccccccCCeEEEEEEcCCCCCCCceEEEE
Q 017303 308 YPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFE 341 (374)
Q Consensus 308 Y~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~ 341 (374)
|| +.++|+||+|+++++ ..++|++|.
T Consensus 296 Y~------~~~~N~gavl~i~~~--~~~~f~~~~ 321 (321)
T cd07420 296 YY------EEGSNRGAYIKLGPD--LTPHFVQYQ 321 (321)
T ss_pred cC------CCCCccEEEEEECCC--CceeEEEeC
Confidence 99 677899999999874 578898884
No 4
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain. Serine/threonine protein phosphatase-5 (PP5) is a member of the PPP gene family of protein phosphatases that is highly conserved among eukaryotes and widely expressed in mammalian tissues. PP5 has a C-terminal phosphatase domain and an extended N-terminal TPR (tetratricopeptide repeat) domain containing three TPR motifs. The PPP (phosphoprotein phosphatase) family, to which PP5 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cel
Probab=100.00 E-value=3.9e-58 Score=448.27 Aligned_cols=267 Identities=39% Similarity=0.691 Sum_probs=239.2
Q ss_pred CCCccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEecc
Q 017303 45 QIPISYPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDV 124 (374)
Q Consensus 45 ~~~~~~p~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDI 124 (374)
.|++++| +||.++++.+++.++.. ..++.+++.+||++|+++|++||++++++. +..++++|||||
T Consensus 3 ~~~~~~~---~i~~~~~~~~~~~~~~~----------~~l~~~~~~~l~~~~~~il~~ep~l~~i~~-p~~~~~~VvGDI 68 (316)
T cd07417 3 GPRLEDE---KVTLEFVKEMIEWFKDQ----------KKLHKKYAYQILLQVKELLKKLPSLVEITI-PEGEKITVCGDT 68 (316)
T ss_pred CcccCCC---CCCHHHHHHHHHHHHcc----------CCCCHHHHHHHHHHHHHHHHhCCcceeccC-CCCceeEEeecc
Confidence 3668888 89999999999998754 257899999999999999999999999986 556689999999
Q ss_pred CCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHh
Q 017303 125 HGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKY 204 (374)
Q Consensus 125 HG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~y 204 (374)
||||.+|.++|+..|+++.+++|||||||||||++|+||+.+|++||+.+|.++++||||||.+.++..|||..|+..+|
T Consensus 69 HG~~~dL~~ll~~~g~~~~~~~ylFLGDyVDRG~~S~Evl~ll~~lki~~p~~v~lLRGNHE~~~~~~~~gf~~e~~~k~ 148 (316)
T cd07417 69 HGQFYDLLNIFELNGLPSETNPYLFNGDFVDRGSFSVEVILTLFAFKLLYPNHFHLNRGNHETDNMNKMYGFEGEVKAKY 148 (316)
T ss_pred cCCHHHHHHHHHhcCCCCccCeEEEEeeEecCCCChHHHHHHHHHhhhccCCceEEEeeccchHHHHHHhhhcchhhhcc
Confidence 99999999999999998776679999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhhhhhcccccCCCcceEEE-------------------------------------------ccCccCCCCCccc
Q 017303 205 GDKGKHAYRKCLGCFEGLPLASLI-------------------------------------------DPSMKLGLSENTE 241 (374)
Q Consensus 205 g~~~~~l~~~~~~~f~~LPlaaii-------------------------------------------dp~~~~g~~~~~~ 241 (374)
+ ..+|+.++++|++||+++++ ||....++.+ ++
T Consensus 149 ~---~~l~~~~~~~f~~LPlaaii~~~~~~vHgGi~~~~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~-s~ 224 (316)
T cd07417 149 N---EQMFDLFSEVFNWLPLAHLINGKVLVVHGGLFSDDGVTLDDIRKIDRFRQPPDSGLMCELLWSDPQPQPGRSP-SK 224 (316)
T ss_pred c---HHHHHHHHHHHHhchHhheeCCeEEEEccccccCCCccHHHhhcccCCCCCCccccceeeeecCCCCCCCCCc-cC
Confidence 6 47999999999999999987 4443334443 47
Q ss_pred cCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCe
Q 017303 242 RGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNK 321 (374)
Q Consensus 242 rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ 321 (374)
||.|++||++++++||++|++++||||||+ +++||++.+ +|+++||||||||| +.++|+
T Consensus 225 Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------------~~~G~~~~~---~~~~~TvfSa~~Y~------~~~~N~ 283 (316)
T cd07417 225 RGVGCQFGPDVTKRFLEENNLEYIIRSHEV------------KDEGYEVEH---DGKCITVFSAPNYC------DQMGNK 283 (316)
T ss_pred CCCceEeCHHHHHHHHHHcCCcEEEECCcc------------cceeEEEec---CCeEEEEeCCcccc------CCCCcc
Confidence 999999999999999999999999999997 789999865 69999999999999 678999
Q ss_pred EEEEEEcCCCCCCCceEEEEecCCCCCCCCc
Q 017303 322 GAYIVLKPPKFDIPDFNVFEAVTPRPDVNPF 352 (374)
Q Consensus 322 ga~l~i~~~~~~~~~~~~f~~~~~~~~~~~~ 352 (374)
||+|.|++++ .+++|++|++. ++|...|.
T Consensus 284 ga~~~i~~~~-~~~~~~~~~~~-~~~~~~~~ 312 (316)
T cd07417 284 GAFIRITGSD-LKPKFTQFEAV-PHPNVKPM 312 (316)
T ss_pred eEEEEEeCCC-ceeeeEeccCC-CCCCCCcc
Confidence 9999999744 38899999987 88888874
No 5
>KOG0373 consensus Serine/threonine specific protein phosphatase involved in cell cycle control, PP2A-related [Cell cycle control, cell division, chromosome partitioning; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-57 Score=410.32 Aligned_cols=240 Identities=36% Similarity=0.570 Sum_probs=219.0
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChH
Q 017303 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (374)
Q Consensus 82 ~~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (374)
+.+|++++..||+.++++|..|.|++.++. |++|||||||||+||+++|+..|-.+..+ |||+|||||||-+|+
T Consensus 17 kyLpE~elk~LCe~v~d~L~eEsNvqPV~t-----PVTvCGDIHGQFyDL~eLFrtgG~vP~tn-YiFmGDfVDRGyySL 90 (306)
T KOG0373|consen 17 KYLPENELKRLCEMVKDILMEESNVQPVST-----PVTVCGDIHGQFYDLLELFRTGGQVPDTN-YIFMGDFVDRGYYSL 90 (306)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhcCccccCC-----CeeEeeccchhHHHHHHHHHhcCCCCCcc-eEEeccccccccccH
Confidence 579999999999999999999999999988 99999999999999999999999887776 999999999999999
Q ss_pred HHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE-------------
Q 017303 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI------------- 228 (374)
Q Consensus 162 evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii------------- 228 (374)
|++.+|++||.+||.++.+||||||++.+...|||++||..|||.. ..|+.+.++|+.|++||+|
T Consensus 91 EtfT~l~~LkaryP~~ITLlRGNHEsRqitqVYGFydECq~KYGna--n~wkycckVFD~LtlaAiID~~vLCVHGGLSP 168 (306)
T KOG0373|consen 91 ETFTLLLLLKARYPAKITLLRGNHESRQITQVYGFYDECQNKYGNA--NVWKYCCKVFDFLTLAAIIDEKVLCVHGGLSP 168 (306)
T ss_pred HHHHHHHHHhhcCCceeEEeeccchhhhhhhhhhhHHHHHhhcCCc--hHHHHHHHHHhhhhHHHHhcCcEEEEcCCCCc
Confidence 9999999999999999999999999999999999999999999976 8999999999999999999
Q ss_pred -----------------------------ccCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCC
Q 017303 229 -----------------------------DPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRP 279 (374)
Q Consensus 229 -----------------------------dp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~ 279 (374)
||.....|.. ++||+|++||.+++.+|+..|++.+|.|+||-
T Consensus 169 dirtlDqir~i~R~qEiPh~G~fcDlmWSDPedve~W~v-SpRGAGwlFGskVt~eF~~iN~L~LicRaHQL-------- 239 (306)
T KOG0373|consen 169 DIRTLDQIRLIERNQEIPHEGPFCDLMWSDPEDVETWAV-SPRGAGWLFGSKVTTEFNHINNLNLICRAHQL-------- 239 (306)
T ss_pred cceeHHHHHhHHhhccCCCCCCccceeccChhhhhhhee-CCCCcceeechhhhHHHHhccchHHHHhHHHH--------
Confidence 3333222332 58999999999999999999999999999995
Q ss_pred CcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEecCCCCCCCCc
Q 017303 280 DLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPF 352 (374)
Q Consensus 280 ~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~~~~~~~~~~ 352 (374)
+++||.++++ ++.|+||||||||| ++++|.||||.++.+ .++++..|.+++...++.|-
T Consensus 240 ----V~EG~KymF~--eK~lvTVWSAPNYC------YRCGNvAsi~~~d~~--~~r~~k~F~avpd~~~~~p~ 298 (306)
T KOG0373|consen 240 ----VQEGFKYMFD--EKGLVTVWSAPNYC------YRCGNVASIMSFDDN--LERETKIFSAVPDNSRVIPP 298 (306)
T ss_pred ----HHhhHHhccC--CCCEEEEecCCchh------hhccCeeeEEEeccc--CCccceeeeecCCccccCCC
Confidence 8999999763 55599999999999 899999999999975 58999999999766666554
No 6
>cd07416 MPP_PP2B PP2B, metallophosphatase domain. PP2B (calcineurin) is a unique serine/threonine protein phosphatase in its regulation by a second messenger (calcium and calmodulin). PP2B is involved in many biological processes including immune responses, the second messenger cAMP pathway, sodium/potassium ion transport in the nephron, cell cycle progression in lower eukaryotes, cardiac hypertrophy, and memory formation. PP2B is highly conserved from yeast to humans, but is absent from plants. PP2B is a heterodimer consisting of a catalytic subunit (CnA) and a regulatory subunit (CnB); CnB contains four Ca2+ binding motifs referred to as EF hands. The PPP (phosphoprotein phosphatase) family, to which PP2B belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -G
Probab=100.00 E-value=7.7e-55 Score=423.79 Aligned_cols=238 Identities=36% Similarity=0.619 Sum_probs=213.3
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHH
Q 017303 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (374)
Q Consensus 83 ~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (374)
.++.+++.+||++|+++|++||+++++++ +++||||||||+.+|.++|+..+.++.++ |+|||||||||++|+|
T Consensus 15 ~l~~~~i~~l~~~~~~il~~e~~l~~i~~-----~i~ViGDIHG~~~dL~~l~~~~g~~~~~~-ylFLGDyVDRG~~s~E 88 (305)
T cd07416 15 RLSEEDALRIITEGAEILRQEPNLLRIEA-----PVTVCGDIHGQFYDLLKLFEVGGSPANTR-YLFLGDYVDRGYFSIE 88 (305)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEccCC-----CEEEEEeCCCCHHHHHHHHHhcCCCCCce-EEEECCccCCCCChHH
Confidence 57899999999999999999999999988 99999999999999999999999987765 9999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE--------------
Q 017303 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI-------------- 228 (374)
Q Consensus 163 vl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-------------- 228 (374)
|+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|..++++|++||+++++
T Consensus 89 vi~lL~~lki~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~y~---~~l~~~~~~~f~~LPlaaii~~~i~~vHGGi~p~ 165 (305)
T cd07416 89 CVLYLWALKILYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS---ERVYDACMEAFDCLPLAALMNQQFLCVHGGLSPE 165 (305)
T ss_pred HHHHHHHHHhhcCCCEEEEeCCCcHHHHHHhhCchhHHHHhcc---HHHHHHHHHHHhhccceeEEcCCEEEEcCCCCcc
Confidence 9999999999999999999999999999999999999999995 47999999999999999987
Q ss_pred ----------------------------ccCccC-------CCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCC
Q 017303 229 ----------------------------DPSMKL-------GLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPD 273 (374)
Q Consensus 229 ----------------------------dp~~~~-------g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~ 273 (374)
||.... ++.++++||.|++||++++++||++|++++||||||+
T Consensus 166 ~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~~~Rg~g~~fG~~~~~~Fl~~n~l~~iiR~He~-- 243 (305)
T cd07416 166 LKTLDDIRKLDRFREPPAFGPMCDLLWSDPLEDFGNEKTQEHFVHNTVRGCSYFYSYRAVCEFLQKNNLLSIIRAHEA-- 243 (305)
T ss_pred cccHHHhcccCCCCCCCCCCcceeeeecCcccccccccccccccccCCCCCceecCHHHHHHHHHHcCCeEEEEeccc--
Confidence 554321 3555668999999999999999999999999999997
Q ss_pred CcCCCCCcccccCCeeeeccC---CCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEecCCCCCCC
Q 017303 274 ARQKRPDLAGMDNGYTIDHDV---ESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVN 350 (374)
Q Consensus 274 ~~~~r~~~~~v~~Gy~~~~~~---~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~~~~~~~~ 350 (374)
+++||++.+.. ..++|+||||||||| +.++|+||++.++++. .+|.+|+++ ++|...
T Consensus 244 ----------~~~G~~~~~~~~~~~~~~~iTvFSa~~Y~------~~~~N~~a~l~i~~~~---~~~~~~~~~-~~~~~~ 303 (305)
T cd07416 244 ----------QDAGYRMYRKSQTTGFPSLITIFSAPNYL------DVYNNKAAVLKYENNV---MNIRQFNCS-PHPYWL 303 (305)
T ss_pred ----------cccceEEecCCCcCCCCcEEEEeCCcccc------CCCCceEEEEEEcCCc---ceEEEecCC-CCCCCC
Confidence 77999986531 013999999999999 6789999999998753 589999987 887766
Q ss_pred C
Q 017303 351 P 351 (374)
Q Consensus 351 ~ 351 (374)
|
T Consensus 304 ~ 304 (305)
T cd07416 304 P 304 (305)
T ss_pred C
Confidence 5
No 7
>KOG0374 consensus Serine/threonine specific protein phosphatase PP1, catalytic subunit [Signal transduction mechanisms; General function prediction only]
Probab=100.00 E-value=3.9e-55 Score=427.82 Aligned_cols=229 Identities=38% Similarity=0.657 Sum_probs=211.1
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcC-CCCCCccEEeeccccCCCCChH
Q 017303 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGL 161 (374)
Q Consensus 83 ~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g-~~~~~~~~vfLGDyVDRG~~s~ 161 (374)
.+..+++..||..++++|.++|+++++++ ||.|||||||||.||+++|...| +|+..+ |||||||||||++|+
T Consensus 31 ~l~~~ei~~l~~~~~~if~~~~~l~e~~a-----PV~i~GDiHGq~~DLlrlf~~~g~~pp~~~-ylFLGDYVDRG~~sl 104 (331)
T KOG0374|consen 31 PLSKSEIIKLCDKAREIFLSQPTLLELSA-----PVKIVGDIHGQFGDLLRLFDLLGSFPPDQN-YVFLGDYVDRGKQSL 104 (331)
T ss_pred eccHHHHHHHHHHHHHHhcCCCceeecCC-----CEEEEccCcCCHHHHHHHHHhcCCCCCccc-EEEecccccCCccce
Confidence 48889999999999999999999999998 99999999999999999999999 887666 999999999999999
Q ss_pred HHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE-------------
Q 017303 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI------------- 228 (374)
Q Consensus 162 evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii------------- 228 (374)
|++.+|+++|++||+++++||||||++.+|..|||++||.++|+. ..+|+.|++.|++||++|+|
T Consensus 105 E~i~LL~a~Ki~yp~~~~lLRGNHE~~~in~~yGFydE~~rr~~~--~~~w~~F~~~f~~mp~~a~i~~kI~CmhGGlsp 182 (331)
T KOG0374|consen 105 ETICLLFALKIKYPENVFLLRGNHECASINRIYGFYDECKRRYGE--IKLWKAFNDAFNCLPLAALIDGKILCMHGGLSP 182 (331)
T ss_pred EEeehhhhhhhhCCceEEEeccccccccccceeeeHHHHHHhcch--HHHHHHHHHHHhhCchhheecceEEEecCCCCh
Confidence 999999999999999999999999999999999999999999985 48999999999999999999
Q ss_pred -----------------------------ccCcc-CCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCC
Q 017303 229 -----------------------------DPSMK-LGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKR 278 (374)
Q Consensus 229 -----------------------------dp~~~-~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r 278 (374)
||... .||.+| .||.++.||++++++||+++++++||||||+
T Consensus 183 ~l~~~~~i~~i~rp~~~~~~gll~DLlWsdp~~~~~g~~~n-~Rg~s~~fg~~~v~~f~~~~~ldlivRaHqv------- 254 (331)
T KOG0374|consen 183 HLKSLDQIRAIPRPTDSPDKGLLCDLLWSDPDDDVPGWEEN-DRGVSFTFGPAVVEDFCKKLDLDLIVRAHQV------- 254 (331)
T ss_pred hhcChHHHhhccCCcCCCccceeeeeeecCCCCCCCCcccC-CCceeeEecHHHHHHHHHHhCcceEEEcCcc-------
Confidence 44433 567766 5999999999999999999999999999997
Q ss_pred CCcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEec
Q 017303 279 PDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAV 343 (374)
Q Consensus 279 ~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~ 343 (374)
+.+||++ +++++|+||||||+|| +.++|.||+|.++.+ ...+|....+.
T Consensus 255 -----v~dGyef---fa~r~lvTIFSAP~Yc------g~~~n~gavm~Vd~~--l~~sf~~l~p~ 303 (331)
T KOG0374|consen 255 -----VEDGYEF---FAGRKLVTIFSAPNYC------GEFDNAGAVMRVDKN--LKCSFVILRPE 303 (331)
T ss_pred -----ccccceE---ecCceEEEEecCchhc------cccCCceEEEEECCC--CeEEEEEeccc
Confidence 7899998 6689999999999999 789999999999976 45677777763
No 8
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional
Probab=100.00 E-value=2.9e-54 Score=418.59 Aligned_cols=232 Identities=35% Similarity=0.573 Sum_probs=210.8
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHH
Q 017303 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (374)
Q Consensus 83 ~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (374)
.++.+++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..+.++.++ |+|||||||||++|+|
T Consensus 15 ~l~~~~i~~l~~~~~~il~~e~~~~~i~~-----~i~vvGDIHG~~~~L~~l~~~~~~~~~~~-~lfLGDyVDRG~~s~e 88 (303)
T PTZ00239 15 CLPERDLKLICERAKEIFLEESNVQPVRA-----PVNVCGDIHGQFYDLQALFKEGGDIPNAN-YIFIGDFVDRGYNSVE 88 (303)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCeEecCC-----CEEEEEeCCCCHHHHHHHHHhcCCCCCce-EEEeeeEcCCCCCHHH
Confidence 57899999999999999999999999987 89999999999999999999999877665 9999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE--------------
Q 017303 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI-------------- 228 (374)
Q Consensus 163 vl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-------------- 228 (374)
++.+|+++|+.+|.++++||||||.+.++..|||..|+..+||.. .+|+.++++|++||++++|
T Consensus 89 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~ky~~~--~~~~~~~~~f~~LPlaaii~~~i~cvHgGi~p~ 166 (303)
T PTZ00239 89 TMEYLLCLKVKYPGNITLLRGNHESRQCTQVYGFYEEILRKYGNS--NPWRLFMDVFDCLPLAALIEGQILCVHGGLSPD 166 (303)
T ss_pred HHHHHHHhhhcCCCcEEEEecccchHHHhhhcChHHHHHHHhcCh--hHHHHHHHHHHhCchheEEcCeEEEEcCccCcc
Confidence 999999999999999999999999999999999999999999853 7899999999999999987
Q ss_pred ----------------------------ccCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCC
Q 017303 229 ----------------------------DPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPD 280 (374)
Q Consensus 229 ----------------------------dp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~ 280 (374)
||....++.+ ++||.|++||++++++||++|++++||||||+
T Consensus 167 ~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~-~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~--------- 236 (303)
T PTZ00239 167 MRTIDQIRTIDRKIEIPHEGPFCDLMWSDPEEVEYWAV-NSRGAGYLFGAKVTKEFCRLNDLTLICRAHQL--------- 236 (303)
T ss_pred cccHhhhccccCCCCCCCCCCceeeEecCccccCCCcc-CCCCCccccCHHHHHHHHHHCCCcEEEEcChh---------
Confidence 5544445554 47999999999999999999999999999997
Q ss_pred cccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEecCC
Q 017303 281 LAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTP 345 (374)
Q Consensus 281 ~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~~~ 345 (374)
+++||++.+ .+++|+||||||||| +.++|+||++.++++ .++.|.+|++++.
T Consensus 237 ---~~~G~~~~~--~~~~~iTvfSa~~Y~------~~~~N~~ail~i~~~--~~~~~~~~~~~~~ 288 (303)
T PTZ00239 237 ---VMEGYKYWF--PDQNLVTVWSAPNYC------YRCGNIASILCLDEN--LQQTWKTFKEVPE 288 (303)
T ss_pred ---hccceEEEe--CCCeEEEEECCCccc------CCCCceEEEEEECCC--CcEeeEEeeCCCc
Confidence 789999854 356799999999999 678999999999975 4778999998743
No 9
>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain. PP2A-like family of phosphoprotein phosphatases (PPP's) including PP4 and PP6. PP2A (Protein phosphatase 2A) is a critical regulator of many cellular activities. PP2A comprises about 1% of total cellular proteins. PP2A, together with protein phosphatase 1 (PP1), accounts for more than 90% of all serine/threonine phosphatase activities in most cells and tissues. The PP2A subunit in addition to having a catalytic domain homologous to PP1, has a unique C-terminal tail, containing a motif that is conserved in the catalytic subunits of all PP2A-like phosphatases including PP4 and PP6, and has an important role in PP2A regulation. The PP2A-like family of phosphatases all share a similar heterotrimeric architecture, that includes: a 65kDa scaffolding subunit (A), a 36kDa catalytic subunit (C), and one of 18 regulatory subunits (B). The PPP (phosphoprotein phosphatase) family, to which PP2
Probab=100.00 E-value=1.7e-54 Score=417.48 Aligned_cols=229 Identities=43% Similarity=0.671 Sum_probs=210.4
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHH
Q 017303 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (374)
Q Consensus 83 ~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (374)
.++.+++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..++++.++ |||||||||||++|+|
T Consensus 14 ~l~~~~~~~l~~~~~~il~~e~~~~~i~~-----~i~vvGDIHG~~~dL~~ll~~~~~~~~~~-~lfLGDyVDRG~~s~e 87 (285)
T cd07415 14 LLPESEVKSLCEKAKEILVKESNVQRVRS-----PVTVCGDIHGQFYDLLELFRVGGDPPDTN-YLFLGDYVDRGYYSVE 87 (285)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCEEecCC-----CEEEEEeCCCCHHHHHHHHHHcCCCCCCe-EEEEeEECCCCcCHHH
Confidence 57899999999999999999999999987 99999999999999999999999987665 9999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE--------------
Q 017303 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI-------------- 228 (374)
Q Consensus 163 vl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-------------- 228 (374)
|+.+|++||+.+|.++++||||||.+.++..|||..||..+||. ..+|+.++++|++||++|++
T Consensus 88 vl~ll~~lk~~~p~~v~llrGNHE~~~~~~~ygf~~e~~~~y~~--~~l~~~~~~~f~~lPlaaii~~~i~cvHgGi~p~ 165 (285)
T cd07415 88 TFLLLLALKVRYPDRITLLRGNHESRQITQVYGFYDECLRKYGN--ANVWKYCTDLFDYLPLAALIDNQIFCVHGGLSPS 165 (285)
T ss_pred HHHHHHHHhhcCCCcEEEEecccchHhhhhhcchhHHHHHhcCc--hHHHHHHHHHHHHhHHHhEeCCeEEEEcCCCCCC
Confidence 99999999999999999999999999999999999999999985 47999999999999999987
Q ss_pred ----------------------------ccCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCC
Q 017303 229 ----------------------------DPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPD 280 (374)
Q Consensus 229 ----------------------------dp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~ 280 (374)
||....++.++ +||.|++||++++++||++|++++||||||+
T Consensus 166 ~~~~~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~-~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~--------- 235 (285)
T cd07415 166 IDTLDQIRAIDRFQEVPHEGPMCDLLWSDPDDIEGWGIS-PRGAGYLFGQDVVEEFNHNNGLTLICRAHQL--------- 235 (285)
T ss_pred cccHHHhhcccCCCCCCCCCCccceEecCCCccCCCCcC-CCCCccccCHHHHHHHHHHCCCeEEEEcCcc---------
Confidence 55544555544 7999999999999999999999999999997
Q ss_pred cccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEec
Q 017303 281 LAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAV 343 (374)
Q Consensus 281 ~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~ 343 (374)
+.+||++.+ +|+|+||||||||| +.++|+||+|.++.+ ..++|.+|++.
T Consensus 236 ---~~~G~~~~~---~~~~~TvfSa~~y~------~~~~n~~a~l~i~~~--~~~~~~~~~~~ 284 (285)
T cd07415 236 ---VMEGYQWMF---DDKLVTVWSAPNYC------YRCGNVASIMELDEH--LKRSFKVFEAA 284 (285)
T ss_pred ---ccceEEEec---CCcEEEEecCCccc------CCCCceEEEEEECCC--CcEeEEEeccC
Confidence 789999865 69999999999999 678999999999875 47789999864
No 10
>PTZ00480 serine/threonine-protein phosphatase; Provisional
Probab=100.00 E-value=1.3e-53 Score=415.67 Aligned_cols=228 Identities=35% Similarity=0.659 Sum_probs=209.0
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHH
Q 017303 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (374)
Q Consensus 83 ~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (374)
.++.+++.+||++|+++|++||+++++++ +++||||||||+.+|.++|+..++++.++ |||||||||||++|+|
T Consensus 31 ~l~~~~i~~l~~~~~~il~~ep~ll~i~~-----~i~vvGDIHG~~~dL~~l~~~~g~~~~~~-ylfLGDyVDRG~~s~e 104 (320)
T PTZ00480 31 NLTEAEVRGLCIKARDIFISQPILLELEA-----PLKICGDVHGQYFDLLRLFEYGGYPPESN-YLFLGDYVDRGKQSLE 104 (320)
T ss_pred CCCHHHHHHHHHHHHHHHHhCCceEecCC-----CeEEEeecccCHHHHHHHHHhcCCCCcce-EEEeceecCCCCCcHH
Confidence 68899999999999999999999999987 99999999999999999999999988776 9999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE--------------
Q 017303 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI-------------- 228 (374)
Q Consensus 163 vl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-------------- 228 (374)
|+.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|..++++|++||+||+|
T Consensus 105 vl~ll~~lki~~p~~v~llRGNHE~~~~~~~ygF~~e~~~~y~---~~l~~~~~~~F~~LPlaAiI~~~i~cvHGGI~p~ 181 (320)
T PTZ00480 105 TICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYT---IKLWKTFTDCFNCLPVAALIDEKILCMHGGLSPE 181 (320)
T ss_pred HHHHHHHhcccCCCceEEEecccchhhhhhhcchHHHHHhhcC---HHHHHHHHHHHHhccHhheecCcEEEEcCCcCcc
Confidence 9999999999999999999999999999999999999999996 47999999999999999988
Q ss_pred ----------------------------ccCcc-CCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCC
Q 017303 229 ----------------------------DPSMK-LGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRP 279 (374)
Q Consensus 229 ----------------------------dp~~~-~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~ 279 (374)
||... .++.++ +||.|++||++++++||++|++++||||||+
T Consensus 182 ~~~l~~i~~i~rp~~~~~~~~~~dllWSDP~~~~~~~~~s-~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq~-------- 252 (320)
T PTZ00480 182 LSNLEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWADN-ERGVSYVFSQEIVQVFLKKHELDLICRAHQV-------- 252 (320)
T ss_pred cCCHHHHhcccCCCCCCccchhhheeecCcccccCCCccC-CCCCccccCHHHHHHHHHhCCCcEEEEcCcc--------
Confidence 56543 455554 7999999999999999999999999999997
Q ss_pred CcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEec
Q 017303 280 DLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAV 343 (374)
Q Consensus 280 ~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~ 343 (374)
+.+||++.+ +++|+||||||||| +.++|+||++.|+++ ...+|.+|++.
T Consensus 253 ----v~~G~~~~~---~~~~iTvFSa~~Y~------~~~~N~ga~l~i~~~--~~~~~~~~~p~ 301 (320)
T PTZ00480 253 ----VEDGYEFFS---KRQLVTLFSAPNYC------GEFDNAGSMMTIDES--LMCSFQILKPA 301 (320)
T ss_pred ----ccCceEEeC---CCcEEEEeCCcccC------CCCCccEEEEEECCC--CcEeEEEecCC
Confidence 789999855 69999999999999 678999999999875 35678877654
No 11
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional
Probab=100.00 E-value=2.1e-53 Score=411.15 Aligned_cols=246 Identities=30% Similarity=0.555 Sum_probs=215.5
Q ss_pred HHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHH
Q 017303 58 VEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRD 137 (374)
Q Consensus 58 ~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~ 137 (374)
.++|.++++.-.+. ......++.+++.+||++|+++|++||+++++++ +++||||||||+.+|.++|+.
T Consensus 5 ~~~i~~~~~~~~~~------~~~~~~i~~~~i~~l~~~~~~il~~e~~ll~i~~-----p~~ViGDIHG~~~~L~~l~~~ 73 (294)
T PTZ00244 5 QTLIEKMLTVKGNR------TQRQILIREEDIRAVLTEVREIFMSQPMLLEIRP-----PVRVCGDTHGQYYDLLRIFEK 73 (294)
T ss_pred HHHHHHHHhcccCC------CccccCCCHHHHHHHHHHHHHHHHhCCCeEeccC-----CceeeccCCCCHHHHHHHHHH
Confidence 45666666532111 1122368899999999999999999999999988 899999999999999999999
Q ss_pred cCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhccc
Q 017303 138 AGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLG 217 (374)
Q Consensus 138 ~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~ 217 (374)
+++++.++ |+|||||||||++|+||+.+++++|+.+|.++++||||||.+.++..|||.+|+..+|+ ..+|+.+++
T Consensus 74 ~~~~~~~~-~lfLGDyVDRG~~s~evl~ll~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~y~---~~l~~~~~~ 149 (294)
T PTZ00244 74 CGFPPYSN-YLFLGDYVDRGKHSVETITLQFCYKIVYPENFFLLRGNHECASINKMYGFFDDVKRRYN---IKLFKAFTD 149 (294)
T ss_pred cCCCCccc-EEEeeeEecCCCCHHHHHHHHHHHhhccCCeEEEEecccchHhHhhccChHHHHHHHhh---HHHHHHHHH
Confidence 99988766 99999999999999999999999999999999999999999999999999999999996 479999999
Q ss_pred ccCCCcceEEE------------------------------------------ccCcc-CCCCCccccCCccccCHHHHH
Q 017303 218 CFEGLPLASLI------------------------------------------DPSMK-LGLSENTERGIGLLWGPDSTE 254 (374)
Q Consensus 218 ~f~~LPlaaii------------------------------------------dp~~~-~g~~~~~~rg~g~~fg~~~~~ 254 (374)
+|+.||+++++ ||... .++.+ ++||.|++||+++++
T Consensus 150 ~f~~lPlaaii~~~il~vHgGi~p~~~~l~~i~~i~rp~~~~~~~~~~dllWsDP~~~~~~~~~-~~Rg~g~~fg~~~~~ 228 (294)
T PTZ00244 150 VFNTMPVCCVISEKIICMHGGLSPDLTSLASVNEIERPCDVPDRGILCDLLWADPEDEVRGFLE-SDRGVSYLFGEDIVN 228 (294)
T ss_pred HHHhCchheEecCeeEEEcCCCCchhhHHHHhhhhccccCCCccchhheeeecCcccccCCCCc-CCCCCccccCHHHHH
Confidence 99999999987 56543 35544 479999999999999
Q ss_pred HHHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCC
Q 017303 255 EFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDI 334 (374)
Q Consensus 255 ~fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~ 334 (374)
+||++|++++||||||+ +++||++.+ +++++||||||||| +.++|+||+|.|+.+ ..
T Consensus 229 ~Fl~~n~l~~iiR~Hq~------------~~~G~~~~~---~~~~iTvfSa~~Y~------~~~~N~~a~l~i~~~--~~ 285 (294)
T PTZ00244 229 DFLDMVDMDLIVRAHQV------------MERGYGFFA---SRQLVTVFSAPNYC------GEFDNDAAVMNIDDK--LQ 285 (294)
T ss_pred HHHHHcCCcEEEEcCcc------------ccCceEEcC---CCeEEEEeCCcccc------CCCCceEEEEEECCC--Cc
Confidence 99999999999999997 789999854 79999999999999 678999999999875 35
Q ss_pred CceEEEEe
Q 017303 335 PDFNVFEA 342 (374)
Q Consensus 335 ~~~~~f~~ 342 (374)
.+|.+|.+
T Consensus 286 ~~f~~~~~ 293 (294)
T PTZ00244 286 CSFLIIPA 293 (294)
T ss_pred EeEEEeec
Confidence 67877764
No 12
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain. PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, Rdg
Probab=100.00 E-value=6.6e-53 Score=407.99 Aligned_cols=228 Identities=35% Similarity=0.663 Sum_probs=207.0
Q ss_pred CCCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChH
Q 017303 82 SVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL 161 (374)
Q Consensus 82 ~~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~ 161 (374)
..++.+++.+||++|+++|++||+++++++ +++||||||||+.+|.++|+..|+++.++ |||||||||||++|+
T Consensus 21 ~~~~~~~i~~l~~~~~~il~~ep~~l~i~~-----~i~viGDIHG~~~~L~~l~~~~~~~~~~~-~lfLGDyVDRG~~s~ 94 (293)
T cd07414 21 VQLTEAEIRGLCLKSREIFLSQPILLELEA-----PLKICGDIHGQYYDLLRLFEYGGFPPESN-YLFLGDYVDRGKQSL 94 (293)
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCCeEecCC-----ceEEEEecCCCHHHHHHHHHhcCCCCcce-EEEEeeEecCCCCcH
Confidence 358899999999999999999999999987 99999999999999999999999987766 999999999999999
Q ss_pred HHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE-------------
Q 017303 162 ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI------------- 228 (374)
Q Consensus 162 evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii------------- 228 (374)
|++.+|+++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|..++++|++||++|++
T Consensus 95 e~i~ll~~lk~~~p~~i~llrGNHE~~~~~~~~gf~~e~~~~y~---~~l~~~~~~~f~~lPlaa~i~~~i~cvHgGi~p 171 (293)
T cd07414 95 ETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYN---IKLWKTFTDCFNCLPVAAIIDEKIFCMHGGLSP 171 (293)
T ss_pred HHHHHHHHhhhhCCCcEEEEecccchhhHhhhcchhhHHHHhhh---HHHHHHHHHHHHHhHHHHhhCCcEEEEccCCCc
Confidence 99999999999999999999999999999999999999999996 47999999999999999976
Q ss_pred -----------------------------ccCcc-CCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCC
Q 017303 229 -----------------------------DPSMK-LGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKR 278 (374)
Q Consensus 229 -----------------------------dp~~~-~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r 278 (374)
||... .++.+ ++||.|++||++++++||++|++++||||||+
T Consensus 172 ~~~~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~-~~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~------- 243 (293)
T cd07414 172 DLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGE-NDRGVSFTFGKDVVAKFLNKHDLDLICRAHQV------- 243 (293)
T ss_pred ccCcHHHHhcccCCCCCCchhhHhhhhccCcccccCCCcc-CCCCcceecCHHHHHHHHHHcCCeEEEECCcc-------
Confidence 55432 34444 47999999999999999999999999999997
Q ss_pred CCcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEe
Q 017303 279 PDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEA 342 (374)
Q Consensus 279 ~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~ 342 (374)
+++||++.+ +++|+||||||||| +.++|+||+|.++.+ ...+|.+|++
T Consensus 244 -----~~~G~~~~~---~~~~iTvfSa~~Y~------~~~~N~~a~l~i~~~--~~~~~~~~~~ 291 (293)
T cd07414 244 -----VEDGYEFFA---KRQLVTLFSAPNYC------GEFDNAGAMMSVDET--LMCSFQILKP 291 (293)
T ss_pred -----ccCeEEEeC---CCcEEEEecCCccc------CCCCceEEEEEECCC--CcEEEEEecC
Confidence 789999854 69999999999999 678999999999975 3557777764
No 13
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-54 Score=420.13 Aligned_cols=278 Identities=35% Similarity=0.543 Sum_probs=256.9
Q ss_pred CCCCccCCCCCCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEec
Q 017303 44 VQIPISYPEDGMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGD 123 (374)
Q Consensus 44 ~~~~~~~p~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGD 123 (374)
..|.+++| |+...|..|+++|+.. +++++.+|..++.+|+++|++.|++-+|+. .....|+||||
T Consensus 108 ~Gp~ls~P----l~~~~i~~lieaFk~k----------q~LH~kYVl~iL~EakK~lkqmPnis~isT-s~S~qVTiCGD 172 (631)
T KOG0377|consen 108 NGPKLSLP----LRKNHIDLLIEAFKKK----------QRLHPKYVLLILREAKKSLKQMPNISRIST-SVSQQVTICGD 172 (631)
T ss_pred CCcccccC----cCchHHHHHHHHHHHh----------hhccHHHHHHHHHHHHHHHHhCCCCCcccc-ccccceEEecc
Confidence 45779999 8899999999999865 368999999999999999999999999998 77789999999
Q ss_pred cCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHH
Q 017303 124 VHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAK 203 (374)
Q Consensus 124 IHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~ 203 (374)
+||.++||.-||.+.|+|+.++.|||+||+||||.+|+|||++|+++-+.||..+|+.|||||+.++|-.|||..|+..|
T Consensus 173 LHGklDDL~~I~yKNGlPS~~npYvFNGDFVDRGk~siEvLmiL~a~~lv~P~~~~LNRGNHED~mmNlRYGF~kEv~~K 252 (631)
T KOG0377|consen 173 LHGKLDDLLVILYKNGLPSSSNPYVFNGDFVDRGKRSIEVLMILFALYLVYPNAVHLNRGNHEDHMMNLRYGFIKEVESK 252 (631)
T ss_pred ccccccceEEEEecCCCCCCCCCeeecCchhhccccchhhHHHHHHHHhcCchhhhccCCchHHHHHHHHHhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccchhhhhhcccccCCCcceEEE-------------------------------------------------------
Q 017303 204 YGDKGKHAYRKCLGCFEGLPLASLI------------------------------------------------------- 228 (374)
Q Consensus 204 yg~~~~~l~~~~~~~f~~LPlaaii------------------------------------------------------- 228 (374)
|...+..+..-+.++|++||++.+|
T Consensus 253 Yk~~~k~Ilr~leevy~WLPi~tiid~~ilvvHGGiSd~Tdl~ll~kIeR~k~~Svlrpp~ek~~d~e~~s~~vg~dEW~ 332 (631)
T KOG0377|consen 253 YKRHGKRILRFLEEVYRWLPIGTIIDSRILVVHGGISDSTDLDLLDKIERGKYVSVLRPPTEKGRDGEKLSKAVGVDEWQ 332 (631)
T ss_pred hhhcccHHHHHHHHHHHhcchhhhcccceEEEecCcccchhHHHHhhhhccceeEEecCCcccCccCCchhhhcChHHHH
Confidence 9988899999999999999999988
Q ss_pred --------ccCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEE
Q 017303 229 --------DPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCI 300 (374)
Q Consensus 229 --------dp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~li 300 (374)
||....|+.+|.-||.|++||+|++..||++++++++||+|+| -.+||+|.| +++++
T Consensus 333 Qi~DImWSDP~~~~GC~pNt~RGgG~yFGpDvT~~~Lqk~~l~~liRSHEC------------KpeGyEf~H---d~kvl 397 (631)
T KOG0377|consen 333 QIFDIMWSDPQATMGCVPNTLRGGGCYFGPDVTDNFLQKHRLSYLIRSHEC------------KPEGYEFCH---DNKVL 397 (631)
T ss_pred HHHHHHhcCcccccCCCcccccCCcceeCchHHHHHHHHhCceeeeeeccc------------CCCcceeee---CCeEE
Confidence 8888889999999999999999999999999999999999998 679999999 59999
Q ss_pred EEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEecCCCCCCCCcccccccCC
Q 017303 301 TLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVNPFYDFKNAID 360 (374)
Q Consensus 301 TvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~ 360 (374)
|||||+||.. ...|+|||+.+.+. ..|.|+||.+.+. .+..+..|+.+.+.
T Consensus 398 TiFSASNYYe------~GSNrGAYikl~~~--~~PhfvQY~a~k~-t~~~tlrqR~~~vE 448 (631)
T KOG0377|consen 398 TIFSASNYYE------IGSNRGAYIKLGNQ--LTPHFVQYQAAKQ-TKRLTLRQRMGIVE 448 (631)
T ss_pred EEEeccchhe------ecCCCceEEEeCCC--CCchHHHHHhhhh-hhhhhHHHHhhHHH
Confidence 9999999994 45799999999865 6899999998644 46778777655544
No 14
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain. Large family of serine/threonine phosphatases, that includes PP1, PP2A and PP2B (calcineurin) family members.
Probab=100.00 E-value=3.1e-52 Score=399.73 Aligned_cols=226 Identities=43% Similarity=0.709 Sum_probs=206.2
Q ss_pred CHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHH
Q 017303 85 PVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETF 164 (374)
Q Consensus 85 ~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl 164 (374)
+++++.+||++|+++|++||++++++. +++||||||||+.+|.++|+..+.++.++ |||||||||||++|+|++
T Consensus 2 ~~~~i~~l~~~~~~il~~e~~~~~i~~-----~i~vvGDiHG~~~~l~~ll~~~~~~~~~~-~vfLGD~VDrG~~s~e~l 75 (271)
T smart00156 2 YAEEILELLREVKEIFRQEPNLVEVSA-----PVTVCGDIHGQFDDLLRLFDLNGPPPDTN-YVFLGDYVDRGPFSIEVI 75 (271)
T ss_pred CHHHHHHHHHHHHHHHHhCCCeEEeCC-----CEEEEEeCcCCHHHHHHHHHHcCCCCCce-EEEeCCccCCCCChHHHH
Confidence 568899999999999999999999987 99999999999999999999999877665 999999999999999999
Q ss_pred HHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE----------------
Q 017303 165 LLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI---------------- 228 (374)
Q Consensus 165 ~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii---------------- 228 (374)
.+++++|+.+|.++++||||||.+.++..|||..|+..+|+ ..+|+.++++|++||+++++
T Consensus 76 ~~l~~lk~~~p~~v~llrGNHE~~~~~~~~gf~~e~~~~~~---~~l~~~~~~~f~~LPl~aii~~~~~~vHgGi~~~~~ 152 (271)
T smart00156 76 LLLFALKILYPNRVVLLRGNHESRSMNEIYGFYDECKRKYG---EEIYEKFQEAFSWLPLAALIDNKILCMHGGLSPDLT 152 (271)
T ss_pred HHHHHHHhcCCCCEEEEeccccHHHHHHhccchhhhhhhcC---HHHHHHHHHHHhhChhheEEcCeEEEEecCCCCccC
Confidence 99999999999999999999999999999999999999996 48999999999999999987
Q ss_pred --------------------------ccCc-cCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCCc
Q 017303 229 --------------------------DPSM-KLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDL 281 (374)
Q Consensus 229 --------------------------dp~~-~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~~ 281 (374)
||.. ..++.++ +||.++.||++++++||++|++++||||||+
T Consensus 153 ~l~~i~~i~r~~~~~~~~~~~dllWsDP~~~~~~~~~~-~Rg~g~~fg~~~~~~Fl~~n~l~~iiR~He~---------- 221 (271)
T smart00156 153 TLDDIRKLKRPQEPPDEGLLIDLLWSDPDQPVDGFQPS-IRGASYYFGPDAVDEFLKKNNLKLIIRAHQV---------- 221 (271)
T ss_pred CHHHHhcccCCCCCCchhhhhheeecCCCcccCCCccC-CCCCccccCHHHHHHHHHHCCCeEEEecCcc----------
Confidence 5532 3455554 6999999999999999999999999999997
Q ss_pred ccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEec
Q 017303 282 AGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAV 343 (374)
Q Consensus 282 ~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~ 343 (374)
+++||++.+ +++++||||||||| +.++|+||++.++++ ..++|.+|++.
T Consensus 222 --~~~G~~~~~---~~~~~TvfSa~~y~------~~~~n~~a~~~i~~~--~~~~~~~~~~~ 270 (271)
T smart00156 222 --VDDGYEFFH---DRKLVTIFSAPNYC------GRFGNKAAVLKVDKD--LKLSFEQFKPG 270 (271)
T ss_pred --cCCcEEEec---CCcEEEEECCcccc------cCCCceEEEEEECCC--CcEEEEEecCC
Confidence 789999865 69999999999999 678999999999875 47788888753
No 15
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain. Bsu1 encodes a nuclear serine-threonine protein phosphatase found in plants and protozoans. Bsu1 has a C-terminal phosphatase domain and an N-terminal Kelch-repeat domain. Bsu1 is preferentially expressed in elongating plant cells. It modulates the phosphorylation state of Bes1, a transcriptional regulator phosphorylated by the glycogen synthase kinase Bin2, as part of a steroid hormone signal transduction pathway. The PPP (phosphoprotein phosphatase) family, to which Bsu1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most
Probab=100.00 E-value=4.8e-51 Score=398.44 Aligned_cols=236 Identities=36% Similarity=0.593 Sum_probs=204.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCC-------CccEEee
Q 017303 78 SEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSK-------NCFFVFN 150 (374)
Q Consensus 78 ~~~~~~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~-------~~~~vfL 150 (374)
.+....++.+++.+||++|+++|++||+++++++ +++||||||||+.+|.++|+..|+++. ..+||||
T Consensus 15 ~~~~~~~~~~~i~~l~~~~~~il~~e~~~~~i~~-----~~~viGDIHG~~~~L~~ll~~~g~~~~~~~~~~~~~~~vfL 89 (311)
T cd07419 15 TDRRFFFNWNEILELCDAAEDIFKQEPMVLRLRA-----PIKIFGDIHGQFGDLMRLFDEYGSPVTEAAGDIEYIDYLFL 89 (311)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHhCCCeEeeCC-----CEEEEEeccCCHHHHHHHHHHcCCCcccccCCCcCceEEEE
Confidence 3344578999999999999999999999999987 999999999999999999999998754 2359999
Q ss_pred ccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhccc---chhhhhhcccccCCCcceEE
Q 017303 151 GDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDK---GKHAYRKCLGCFEGLPLASL 227 (374)
Q Consensus 151 GDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~---~~~l~~~~~~~f~~LPlaai 227 (374)
|||||||++|+||+.+|++||+.+|.++++||||||.+.++..+||..++..+|+.. ...+|..+.++|++||++++
T Consensus 90 GDyVDRGp~s~evl~ll~~lk~~~p~~v~lLRGNHE~~~l~~~~gf~~e~~~~~~~~~~~~~~l~~~~~~~f~~LPl~av 169 (311)
T cd07419 90 GDYVDRGSNSLETICLLLALKVKYPNQIHLIRGNHEDRDINALFGFREECKERLGEDPNDGDSVWRRINRLFEWLPLAAI 169 (311)
T ss_pred CCccCCCCChHHHHHHHHHhhhcCCCcEEEeccccchHHHHHHhcccHHHHHhcCccchhhHHHHHHHHHHHHhCchhhe
Confidence 999999999999999999999999999999999999999999999999999999752 35799999999999999997
Q ss_pred E-------------------------------------------ccCcc---CCCCCc--cccCCc--cccCHHHHHHHH
Q 017303 228 I-------------------------------------------DPSMK---LGLSEN--TERGIG--LLWGPDSTEEFL 257 (374)
Q Consensus 228 i-------------------------------------------dp~~~---~g~~~~--~~rg~g--~~fg~~~~~~fl 257 (374)
+ ||... .++.++ ++||.| +.||++++++||
T Consensus 170 i~~~~l~vHgGi~p~~~~l~~i~~i~r~~~~~~~~~~~~dllWsDP~~~~~~~~~~~~~~~~rg~g~~~~fg~~~~~~Fl 249 (311)
T cd07419 170 IEDKILCMHGGIGRSINHVSEIEDLKRPLTMEFGEQVVMDLLWSDPTENDSVLGLRPNAIDPRGPGLIVKFGPDRVHRFL 249 (311)
T ss_pred ecccEEEEccCCCCCCCcHHHHhhcCCCCCCCCCCcceeeeeccCccccccccccccCCCCCCCCCcceeECHHHHHHHH
Confidence 6 33321 122222 138888 699999999999
Q ss_pred HHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCce
Q 017303 258 KKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDF 337 (374)
Q Consensus 258 ~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~ 337 (374)
++|++++||||||+ +.+||++.+ +++++||||||||| +.++|+||+++++.+ .+.+|
T Consensus 250 ~~n~l~~iiRgHe~------------~~~G~~~~~---~~~~iTvfSa~~y~------~~~~n~~ai~~i~~~--~~~~~ 306 (311)
T cd07419 250 EENDLQMIIRAHEC------------VMDGFERFA---QGKLITLFSATNYC------GTAGNAGAILVLGRD--LTIIP 306 (311)
T ss_pred HHCCCeEEEEechh------------hhCCeEEeC---CCeEEEEecCCccc------CCCCceEEEEEECCC--CcEeE
Confidence 99999999999997 679999855 69999999999999 678999999999875 35566
Q ss_pred EEEE
Q 017303 338 NVFE 341 (374)
Q Consensus 338 ~~f~ 341 (374)
.+++
T Consensus 307 ~~~~ 310 (311)
T cd07419 307 KLIH 310 (311)
T ss_pred EEeC
Confidence 6554
No 16
>KOG0375 consensus Serine-threonine phosphatase 2B, catalytic subunit [General function prediction only]
Probab=100.00 E-value=6.7e-50 Score=382.62 Aligned_cols=239 Identities=32% Similarity=0.588 Sum_probs=210.1
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHH
Q 017303 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (374)
Q Consensus 83 ~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (374)
.+.++....|+.++.++|++|++++++++ ||+|||||||||.||+++|+..|-|...+ |+|||||||||.+|+|
T Consensus 60 rl~ee~alrIi~~~a~llr~Eknmi~v~A-----PiTVCGDIHGQf~DLmKLFEVGG~PA~t~-YLFLGDYVDRGyFSiE 133 (517)
T KOG0375|consen 60 RLEEEQALRIINEGAALLRQEKNMIEVEA-----PITVCGDIHGQFFDLMKLFEVGGSPANTR-YLFLGDYVDRGYFSIE 133 (517)
T ss_pred chhHHHHHHHHHHHHHHHhcCCceEeccC-----CeeEecccchHHHHHHHHHHccCCcccce-eEeeccccccceeeee
Confidence 46788899999999999999999999999 99999999999999999999988887666 9999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE--------------
Q 017303 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI-------------- 228 (374)
Q Consensus 163 vl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-------------- 228 (374)
|+.+|.+||+.||..+++||||||++.+...+.|..||..||. .++|+.+++.|++||+||+.
T Consensus 134 CvlYLwsLKi~yp~tl~lLRGNHECrHLT~YFTFKqEc~iKYs---e~vYdaCmesFd~LPLAAlmNqQflCVHGGlSPE 210 (517)
T KOG0375|consen 134 CVLYLWSLKINYPKTLFLLRGNHECRHLTEYFTFKQECKIKYS---ERVYDACMESFDCLPLAALMNQQFLCVHGGLSPE 210 (517)
T ss_pred hHHHHHHHhcCCCCeEEEecCCcchhhhHhHhhHHHHHhHhcc---HHHHHHHHHHhccchHHHHhcCceEEecCCCCcc
Confidence 9999999999999999999999999999999999999999995 58999999999999999987
Q ss_pred ----------------------------ccCc-------cCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCC
Q 017303 229 ----------------------------DPSM-------KLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPD 273 (374)
Q Consensus 229 ----------------------------dp~~-------~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~ 273 (374)
||.. ...+.+|+.||+++.|...++.+||+.||+--|||+|+.+
T Consensus 211 i~tl~DIr~l~RF~EpPa~GpmCDLLWsDPlEdfgnek~~e~f~hNsvRGCSyfysy~A~C~FLq~nnLLSIiRAHEAQ- 289 (517)
T KOG0375|consen 211 IHTLDDIRKLDRFKEPPAFGPMCDLLWSDPLEDFGNEKTSEHFTHNSVRGCSYFYSYPAVCEFLQNNNLLSIIRAHEAQ- 289 (517)
T ss_pred cccHHHHHhhhhccCCCccCcchhhhccChhhhccccccccccccCccccccceechHHHHHHHHhCCchhhhhhhhhh-
Confidence 4432 1246678899999999999999999999999999999975
Q ss_pred CcCCCCCcccccCCeeeecc---CCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEecCCCCCCC
Q 017303 274 ARQKRPDLAGMDNGYTIDHD---VESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAVTPRPDVN 350 (374)
Q Consensus 274 ~~~~r~~~~~v~~Gy~~~~~---~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~~~~~~~~ 350 (374)
|-||++... ..-..|+||||||||. +.++|+|||+..+++ .+.+.||... |+|--.
T Consensus 290 -----------DaGYRMYrksqttGFPSLiTiFSAPNYL------DvYnNKAAvLKYEnN---VMNIRQFncS-PHPYWL 348 (517)
T KOG0375|consen 290 -----------DAGYRMYRKSQTTGFPSLITIFSAPNYL------DVYNNKAAVLKYENN---VMNIRQFNCS-PHPYWL 348 (517)
T ss_pred -----------hhhhhhhhcccccCCchheeeecCCchh------hhhccHHHHhhhhcc---cceeeccCCC-CCCccc
Confidence 445554211 1126799999999999 789999999999875 4578999975 775444
Q ss_pred Cc
Q 017303 351 PF 352 (374)
Q Consensus 351 ~~ 352 (374)
|.
T Consensus 349 Pn 350 (517)
T KOG0375|consen 349 PN 350 (517)
T ss_pred cc
Confidence 43
No 17
>KOG0371 consensus Serine/threonine protein phosphatase 2A, catalytic subunit [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-49 Score=366.42 Aligned_cols=229 Identities=40% Similarity=0.616 Sum_probs=211.8
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHH
Q 017303 83 VFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLE 162 (374)
Q Consensus 83 ~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~e 162 (374)
.+.+.++..+|+.|+++|++|.++..+.. +++||||+||||++|+++|+..|..++.+ |+|+|||||||++|+|
T Consensus 32 ~lse~~v~~lc~~a~~~L~~e~nV~~v~~-----pvtvcGDvHGqf~dl~ELfkiGG~~pdtn-ylfmGDyvdrGy~Sve 105 (319)
T KOG0371|consen 32 PLSEVDVSSLCLLAKEILDKEENVQPVNC-----PVTVCGDVHGQFHDLIELFKIGGLAPDTN-YLFMGDYVDRGYYSVE 105 (319)
T ss_pred CCccccchhHHHHHHHHHhcccccccccc-----ceEEecCcchhHHHHHHHHHccCCCCCcc-eeeeeeecccccchHH
Confidence 56778889999999999999999999988 99999999999999999998888877766 9999999999999999
Q ss_pred HHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE--------------
Q 017303 163 TFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI-------------- 228 (374)
Q Consensus 163 vl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-------------- 228 (374)
++.+|.++|++||++|.+||||||.+.+.+.|||++||.+|||.. .+|..|.+.|+.+|++++|
T Consensus 106 tVS~lva~Kvry~~rvtilrGNHEsrqitqvygfydeclRkyg~a--nvw~~Ftdlfdy~P~tali~~~ifc~HGgLsps 183 (319)
T KOG0371|consen 106 TVSLLVALKVRYPDRVTILRGNHESRQITQVYGFYDECLRKYGNA--NVWKYFTDLFDYLPLTALIESKIFCLHGGLSPS 183 (319)
T ss_pred HHHHHHHhhccccceeEEecCchHHHHHHHHHhhHHHHHhhcccc--cchHHhhhhhhccchHhhhccceeeccCCcCcc
Confidence 999999999999999999999999999999999999999999976 8999999999999999988
Q ss_pred ----------------------------ccCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCC
Q 017303 229 ----------------------------DPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPD 280 (374)
Q Consensus 229 ----------------------------dp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~ 280 (374)
||....||... +||+++.||.+..++|..++|+++|-|+|+-
T Consensus 184 i~tld~~r~~dr~~evphegpmcDlLwsdpddr~gwg~s-prgag~tfg~di~~~fn~~n~lslisRahql--------- 253 (319)
T KOG0371|consen 184 IDTLDLIRLLDRIQEVPHEGPMCDLLWSDPDDRCGWGIS-PRGAGYTFGQDISEQFNHKNGLSLISRAHQL--------- 253 (319)
T ss_pred cchHHHHHHHHHhhcccCCCChhheeccCcccCCCCCCC-CCCCCcccchhhHHHhhccCCchHhHHHHHH---------
Confidence 66666777764 8999999999999999999999999999995
Q ss_pred cccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEEec
Q 017303 281 LAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFEAV 343 (374)
Q Consensus 281 ~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~~~ 343 (374)
+.+||.+.|. ..++|+||||||| ++++|.+|++.++.. ..-.|.||++.
T Consensus 254 ---vm~g~nW~~~---~~~vtiFSapnyc------Yrcgn~a~i~e~d~~--~~~~f~q~~ps 302 (319)
T KOG0371|consen 254 ---VMEGYNWYHL---WNVVTIFSAPNYC------YRCGNQAAIMERDDT--KNYDFLQFDPS 302 (319)
T ss_pred ---Hhcccceeee---cceeEEccCCchh------hccccHHHHhhhhhc--cCcceEEecCC
Confidence 7899999885 6778999999999 899999999999864 45689999985
No 18
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=100.00 E-value=4.8e-46 Score=370.22 Aligned_cols=260 Identities=45% Similarity=0.763 Sum_probs=237.9
Q ss_pred CCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHH
Q 017303 55 MLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFL 134 (374)
Q Consensus 55 ~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~l 134 (374)
++|.+|+..+|..++.. ..++...+..|+..+..++.++|++++++. +.+..+.|+||+|||+.+++++
T Consensus 164 kvt~e~vk~~~~~~~~~----------~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~-~~d~~~sv~gd~hGqfydl~ni 232 (476)
T KOG0376|consen 164 KVTLEFVKTLMEVFKNQ----------KKLPKKYAYSILDLAKTILRKLPSLVEISV-PGDVKISVCGDTHGQFYDLLNI 232 (476)
T ss_pred hhhHHHHHHHHHhhhcc----------cccccccceeeHHHHhhHHhcCCcceEeec-CCCceEEecCCccccccchhhh
Confidence 79999999999777654 246667778999999999999999999996 8899999999999999999999
Q ss_pred HHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhh
Q 017303 135 LRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRK 214 (374)
Q Consensus 135 l~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~ 214 (374)
++..|.|+....|+|.||+||||.+|.|++..++++|+.+|+++|++|||||+..++..|||.+++..+|.. +.+..
T Consensus 233 f~l~g~Ps~t~~ylfngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte---~~~~~ 309 (476)
T KOG0376|consen 233 FELNGLPSETNPYLFNGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTE---EMFNL 309 (476)
T ss_pred HhhcCCCCCcccccccCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHH---HHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999999999999964 67777
Q ss_pred cccccCCCcceEEE-------------------------------------------ccCccCCCCCccccCCccccCHH
Q 017303 215 CLGCFEGLPLASLI-------------------------------------------DPSMKLGLSENTERGIGLLWGPD 251 (374)
Q Consensus 215 ~~~~f~~LPlaaii-------------------------------------------dp~~~~g~~~~~~rg~g~~fg~~ 251 (374)
+.++|.+||++.+| ||....|..++ .||.|..||+|
T Consensus 310 f~~~f~~LPl~~~i~~~~~~~hgglf~~~~v~l~d~r~i~r~~~~~~~~~~~~~lws~pq~~~g~s~S-~r~~g~~fG~d 388 (476)
T KOG0376|consen 310 FSEVFIWLPLAHLINNKVLVMHGGLFSPDGVTLEDFRNIDRFEQPPEEGLMCELLWSDPQPANGRSPS-KRGVGLQFGPD 388 (476)
T ss_pred hhhhhccccchhhhcCceEEEecCcCCCCCccHHHHHhhhhccCCcccccccccccCCCccccCCCcc-ccCceeeeCCC
Confidence 77999999999998 55555666654 79999999999
Q ss_pred HHHHHHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCC
Q 017303 252 STEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPK 331 (374)
Q Consensus 252 ~~~~fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~ 331 (374)
++++||+.++++.|||||++ -+.||++.| +|+|+||||||||| .+.+|.||++.+++++
T Consensus 389 ~t~~f~~~n~l~~i~rshe~------------~d~gy~~eh---~g~l~tvfsapnyc------d~~~n~ga~i~~~~~~ 447 (476)
T KOG0376|consen 389 VTERFLQDNNLDKIIRSHEV------------KDEGYEVEH---SGKLITVFSAPNYC------DQMGNKGAFIHLEPDD 447 (476)
T ss_pred chhhHHhhcchHHHhhcccc------------CCCceeeec---CCcEEEEecCcchh------hhcCCcceEEEecCCC
Confidence 99999999999999999997 578999999 69999999999999 6789999999999866
Q ss_pred CCCCceEEEEecCCCCCCCCc
Q 017303 332 FDIPDFNVFEAVTPRPDVNPF 352 (374)
Q Consensus 332 ~~~~~~~~f~~~~~~~~~~~~ 352 (374)
..|.|.+|+++ |+|..+|.
T Consensus 448 -~~p~~~~~e~v-p~~~~~~m 466 (476)
T KOG0376|consen 448 -LTPNFYTFEAV-PHPDVKPM 466 (476)
T ss_pred -CccceeecccC-CCCCCCCc
Confidence 59999999999 99998874
No 19
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain. The PPP (phosphoprotein phosphatase) family is one of two known protein phosphatase families specific for serine and threonine. This family includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate
Probab=99.93 E-value=1.2e-25 Score=208.20 Aligned_cols=185 Identities=43% Similarity=0.637 Sum_probs=136.9
Q ss_pred EEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHH
Q 017303 119 VVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEK 198 (374)
Q Consensus 119 ~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~ 198 (374)
+|||||||++.+|.++|+.++.++.+. +||||||||||+.+.+++.+++.++.. |.++++||||||.+.++...++..
T Consensus 1 ~~igDiHg~~~~l~~~l~~~~~~~~d~-li~lGD~vdrg~~~~~~l~~l~~~~~~-~~~~~~l~GNHe~~~~~~~~~~~~ 78 (225)
T cd00144 1 YVIGDIHGCLDDLLRLLEKIGFPPNDK-LIFLGDYVDRGPDSVEVIDLLLALKIL-PDNVILLRGNHEDMLLNFLYGFYD 78 (225)
T ss_pred CEEeCCCCCHHHHHHHHHHhCCCCCCE-EEEECCEeCCCCCcHHHHHHHHHhcCC-CCcEEEEccCchhhhhhhhcCCcc
Confidence 589999999999999999999866555 999999999999999999999999877 889999999999998877666544
Q ss_pred HHH------HHhcccchhhhhhcccccCCCcceEEEcc-C---ccCCCCCc------------cccCCcccc--------
Q 017303 199 EVM------AKYGDKGKHAYRKCLGCFEGLPLASLIDP-S---MKLGLSEN------------TERGIGLLW-------- 248 (374)
Q Consensus 199 e~~------~~yg~~~~~l~~~~~~~f~~LPlaaiidp-~---~~~g~~~~------------~~rg~g~~f-------- 248 (374)
+.. .........++..+.++|..||+++.++. . .|.|+.+. .+.....+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~vHag~~~~~~~~~~~~~~~~~~~~~~~lw~r~~~~~~ 158 (225)
T cd00144 79 EDEWIGGTLRLLKKLGEDLWEEFNDVFFYLPLAALIETKKVLCVHGGLSPGLPLEEQIKEEPEDQLPEDLLWSDPLELPG 158 (225)
T ss_pred hhhccchhHHHHHhhCHHHHHHHHHHHHhCcHheEeCCCeEEEEeCCCCCccchHHhhhcCcccccceeeeecCCCCCCC
Confidence 321 11111135788888999999999998842 1 02222111 001111222
Q ss_pred ---------CHHHHHHHHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccC
Q 017303 249 ---------GPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFR 319 (374)
Q Consensus 249 ---------g~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~ 319 (374)
++.+.+.|+..++.+.||||||+ +..|+.+ ...++++||+|++.|+ +..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~ii~GHt~------------~~~~~~~---~~~~~~i~IDtg~~~~------~~~~ 217 (225)
T cd00144 159 GFGSSRRGGGPDAVEWFLKKNGLKLIVRGHTP------------VEEGYEF---GHDGNLITIDSGCNYC------GGGG 217 (225)
T ss_pred CCcCCCCCCCHHHHHHHHHHCCCeEEEEcCcc------------ccCccEE---cCCCCEEEEecCCccc------CCCC
Confidence 45667889999999999999998 4456542 2358999999999997 4455
Q ss_pred CeEEEEE
Q 017303 320 NKGAYIV 326 (374)
Q Consensus 320 N~ga~l~ 326 (374)
|..+.+.
T Consensus 218 ~~l~~~~ 224 (225)
T cd00144 218 NKLAALV 224 (225)
T ss_pred ccEEEEe
Confidence 6666543
No 20
>PRK11439 pphA serine/threonine protein phosphatase 1; Provisional
Probab=99.92 E-value=4.8e-25 Score=205.28 Aligned_cols=185 Identities=21% Similarity=0.249 Sum_probs=126.1
Q ss_pred eEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCc
Q 017303 106 CVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNH 185 (374)
Q Consensus 106 l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNH 185 (374)
+..+.. +..++++||||||||+.+|+++|+.+++.+..++++||||+|||||+|.|||.+|.. .++++|+|||
T Consensus 8 ~~~~~~-~~~~ri~vigDIHG~~~~L~~lL~~i~~~~~~D~li~lGDlvDrGp~s~~vl~~l~~------~~~~~v~GNH 80 (218)
T PRK11439 8 YQRIAG-HQWRHIWLVGDIHGCFEQLMRKLRHCRFDPWRDLLISVGDLIDRGPQSLRCLQLLEE------HWVRAVRGNH 80 (218)
T ss_pred eecccC-CCCCeEEEEEcccCCHHHHHHHHHhcCCCcccCEEEEcCcccCCCcCHHHHHHHHHc------CCceEeeCch
Confidence 345555 677899999999999999999999998864455599999999999999999999976 4688999999
Q ss_pred cccceecccCCHHHHHHHhccc--------chhhhhhcccccCCCcceEEEccCc------cCCCCCcc------ccCCc
Q 017303 186 ESKYCTSVYGFEKEVMAKYGDK--------GKHAYRKCLGCFEGLPLASLIDPSM------KLGLSENT------ERGIG 245 (374)
Q Consensus 186 E~~~~~~~~gf~~e~~~~yg~~--------~~~l~~~~~~~f~~LPlaaiidp~~------~~g~~~~~------~rg~g 245 (374)
|.++++...+-....|..+|+. ..+.+..+.+|+++||+...+.... |.|+.... .....
T Consensus 81 E~~~l~~~~~~~~~~w~~~gg~~~~~l~~~~~~~~~~~~~~l~~LP~~~~~~~~~~~~~~vHAg~p~~~~~~~~~~~~~~ 160 (218)
T PRK11439 81 EQMALDALASQQMSLWLMNGGDWFIALTDNQQKQAKTLLEKCQRLPFILEVHCRTGKHVIAHADYPADVYEWQKDVDLHQ 160 (218)
T ss_pred HHHHHHHHHCCccchhhhCCChhhhhcchhhhHHHHHHHHHHhcCCcEEEeeccCCCEEEEeCCCCCCchhhhccCCccc
Confidence 9998865432211233333321 1234455678999999998763211 33332110 01223
Q ss_pred cccCHHHHHHHHH---HCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEE
Q 017303 246 LLWGPDSTEEFLK---KFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITL 302 (374)
Q Consensus 246 ~~fg~~~~~~fl~---~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTv 302 (374)
.+|+++...+-.. ..+.+.||+|||+........+.+++|+|..+ +|+|.++
T Consensus 161 ~~w~r~~~~~~~~~~~~~~~~~vv~GHT~~~~~~~~~~~i~IDtGav~-----gg~Lt~l 215 (218)
T PRK11439 161 VLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVF-----GGELTLV 215 (218)
T ss_pred eEEcChhhhhccccccccCCCEEEECCccCCCccccCCEEEEECCCCC-----CCeeEEE
Confidence 5787654322111 12557899999987766655667889999754 5676654
No 21
>PRK13625 bis(5'-nucleosyl)-tetraphosphatase PrpE; Provisional
Probab=99.92 E-value=4.1e-25 Score=209.31 Aligned_cols=173 Identities=20% Similarity=0.333 Sum_probs=116.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCC--------CCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccc
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFP--------SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~--------~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~ 187 (374)
|+++||||||||++.|.++|+++++. +.++++|||||||||||+|.|||.+++.+. .+.++++||||||.
T Consensus 1 ~~~~vIGDIHG~~~~L~~lL~~~~~~~~~~~~~~~~~d~li~lGDliDRGp~S~~vl~~~~~~~--~~~~~~~l~GNHE~ 78 (245)
T PRK13625 1 MKYDIIGDIHGCYQEFQALTEKLGYNWSSGLPVHPDQRKLAFVGDLTDRGPHSLRMIEIVWELV--EKKAAYYVPGNHCN 78 (245)
T ss_pred CceEEEEECccCHHHHHHHHHHcCCCcccCcccCCCCCEEEEECcccCCCcChHHHHHHHHHHh--hCCCEEEEeCccHH
Confidence 57999999999999999999999874 334569999999999999999999998874 45689999999999
Q ss_pred cceecccC-------CHHHHHHHhccc----chhhhhhcccccCCCcceEEEccC----ccCCCCCcc---c--c-CCcc
Q 017303 188 KYCTSVYG-------FEKEVMAKYGDK----GKHAYRKCLGCFEGLPLASLIDPS----MKLGLSENT---E--R-GIGL 246 (374)
Q Consensus 188 ~~~~~~~g-------f~~e~~~~yg~~----~~~l~~~~~~~f~~LPlaaiidp~----~~~g~~~~~---~--r-g~g~ 246 (374)
++++...+ ...+....|... ...+++.+.++|++||++.+++.. .|.|+.+.. + + ..-.
T Consensus 79 ~~l~~~~~~~~~~~~gg~~tl~~~~~~~~~~~~~~~~~~~~~~~~lPl~~~~~~~~~~~vHAG~~~~~~~~~~~~~~~~~ 158 (245)
T PRK13625 79 KLYRFFLGRNVTIAHGLETTVAEYEALPSHKQNMIKEKFITLYEQAPLYHILDEGRLVVAHAGIRQDYIGRQDKKVQTFV 158 (245)
T ss_pred HHHHHHhCCCccccchhHhHHHHHhccChhhHHHHHHHHHHHHHhCCceEEEeCCCEEEEECCCChHhcccchhhhhhHH
Confidence 87764322 112333344321 235778899999999998876321 144543321 0 0 0011
Q ss_pred ccCH----------HHHHHHHHH-CCCcEEEEeccCCCCcCCCCCcccccCCeee
Q 017303 247 LWGP----------DSTEEFLKK-FSLKLIIRSHEGPDARQKRPDLAGMDNGYTI 290 (374)
Q Consensus 247 ~fg~----------~~~~~fl~~-~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~ 290 (374)
+||. .....|.+. .+.+.+|+|||+........+.+++|+|+.+
T Consensus 159 l~~~~~~~~~~~~~~~~~~~~~~~~g~~~vV~GHtp~~~~~~~~~~i~IDtGa~~ 213 (245)
T PRK13625 159 LYGDITGEKHPDGSPVRRDWAKEYKGTAWIVYGHTPVKEPRFVNHTVNIDTGCVF 213 (245)
T ss_pred hhccccCCcCCCCCeeeeccchhcCCCcEEEECCCCCccceecCCeEEEECcCcc
Confidence 2321 011223332 3556899999987655544556778888643
No 22
>cd07413 MPP_PA3087 Pseudomonas aeruginosa PA3087 and related proteins, metallophosphatase domain. PA3087 is an uncharacterized protein from Pseudomonas aeruginosa with a metallophosphatase domain that belongs to the phosphoprotein phosphatase (PPP) family. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of
Probab=99.90 E-value=7.2e-24 Score=198.01 Aligned_cols=174 Identities=18% Similarity=0.224 Sum_probs=115.7
Q ss_pred EEEeccCCCHHHHHHHHHHcCCCC-------CCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCcccccee
Q 017303 119 VVVGDVHGQLHDVLFLLRDAGFPS-------KNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCT 191 (374)
Q Consensus 119 ~ViGDIHG~~~dL~~ll~~~g~~~-------~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~ 191 (374)
+||||||||++.|.++|+++++.. ...++|||||||||||+|.||+.+|+.++. +.++++|+||||.+++.
T Consensus 2 ~vIGDIHG~~~~L~~lL~~i~~~~~~~~~~~~~d~lvflGD~IDRGp~S~~vl~~l~~l~~--~~~~~~l~GNHE~~ll~ 79 (222)
T cd07413 2 DFIGDIHGHAEKLVVLLHKLGYQELSGVYRHPERQVVFLGDLIDRGPEIRELLEIVKSMVD--AGHALAVMGNHEFNAIA 79 (222)
T ss_pred EEEEeccCCHHHHHHHHHHcCCCccccccCCCCCEEEEeCcccCCCCCHHHHHHHHHHhhc--CCCEEEEEccCcHHHHH
Confidence 699999999999999999998751 234699999999999999999999999753 35799999999998875
Q ss_pred cccCC-H----------------HHHHHHhcccchhhhhhcccccCCCcceEEEccCc--cCCCCCc------cccCCcc
Q 017303 192 SVYGF-E----------------KEVMAKYGDKGKHAYRKCLGCFEGLPLASLIDPSM--KLGLSEN------TERGIGL 246 (374)
Q Consensus 192 ~~~gf-~----------------~e~~~~yg~~~~~l~~~~~~~f~~LPlaaiidp~~--~~g~~~~------~~rg~g~ 246 (374)
...+. . .+..+.++. ..++++.+.+||+.||+........ |.|+... .+.....
T Consensus 80 ~~~~~~~~~~w~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~l~~lP~~~~~~~~~~VHAg~~~~l~~~~~~~~~~~~ 158 (222)
T cd07413 80 WHTKDPSGGEWLRAHSKKNLRQHQAFLEQFRE-HSEEHKDWLEWFKTLPLFLDLGGVRVVHACWDETLLKGPEIALPEGH 158 (222)
T ss_pred hhhCCcccchhhhcCCCcccccHHHHHHHHhc-cchhHHHHHHHHhcCCcEEEECCEEEEECCcCHhhccCCCcCCCCCc
Confidence 33221 0 122233332 2355678899999999998762211 3343211 0000000
Q ss_pred ccC-------HHHHHHHHHHCCCcEEEEeccCCCC--cCCCCCcccccCCeeeeccCCCCeEEEEEe
Q 017303 247 LWG-------PDSTEEFLKKFSLKLIIRSHEGPDA--RQKRPDLAGMDNGYTIDHDVESGMCITLFS 304 (374)
Q Consensus 247 ~fg-------~~~~~~fl~~~~l~~IIrGH~~~~~--~~~r~~~~~v~~Gy~~~~~~~~g~liTvFS 304 (374)
.|. +.....+.. +.||+|||+... +..+.+.+++|+|..+ +|+|.++--
T Consensus 159 ~~~~~~~~~~~~~~~~~~~----~~Vv~GHt~~~~~~~~~~~~~i~iDTGA~~-----~G~Lta~~~ 216 (222)
T cd07413 159 SFVDKDGIVRDNIRVKWWG----KPVFVGHYWLNGEPAPLNPNVACLDYSAAK-----GGKLVAYRW 216 (222)
T ss_pred eeecCCCccccccchhhcC----CCEEEecCCCCCCCccccCCEEEEeccccc-----CCeeEEEEc
Confidence 111 000001111 679999998743 5666888999999754 688777643
No 23
>cd07423 MPP_PrpE Bacillus subtilis PrpE and related proteins, metallophosphatase domain. PrpE (protein phosphatase E) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases and a key signal transduction pathway component controlling the expression of spore germination receptors GerA and GerK in Bacillus subtilis. PrpE is closely related to ApaH (also known symmetrical Ap(4)A hydrolase and bis(5'nucleosyl)-tetraphosphatase). PrpE has specificity for phosphotyrosine only, unlike the serine/threonine phosphatases to which it is related. The Bacilli members of this family are single domain proteins while the other members have N- and C-terminal domains in addition to this phosphatase domain. The PPP (phosphoprotein phosphatase) family, to which PrpE belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpA/Prp
Probab=99.90 E-value=1e-23 Score=198.29 Aligned_cols=170 Identities=23% Similarity=0.352 Sum_probs=113.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCC---------CccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCcc
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSK---------NCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~---------~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE 186 (374)
|++.||||||||+.+|.++|+++++... .++++|||||||||++|.||+.+|+.++. +.++++||||||
T Consensus 1 ~~i~vigDIHG~~~~L~~ll~~~~~~~~~~~~~~~~~~d~lv~lGDlIDrG~~s~evl~~l~~l~~--~~~~~~v~GNHE 78 (234)
T cd07423 1 GPFDIIGDVHGCYDELEELLEKLGYRIKRVGTVTHPEGRRAVFVGDLVDRGPDSPEVLRLVMSMVA--AGAALCVPGNHD 78 (234)
T ss_pred CCeEEEEECCCCHHHHHHHHHHcCCccccCccccCCCCCEEEEECCccCCCCCHHHHHHHHHHHhh--CCcEEEEECCcH
Confidence 5899999999999999999999987532 24699999999999999999999998764 357999999999
Q ss_pred ccceeccc--------CCHHHHHHHhcccchhhhhhcccccCCCcceEEEccC----ccCCCCCccccC------Ccccc
Q 017303 187 SKYCTSVY--------GFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIDPS----MKLGLSENTERG------IGLLW 248 (374)
Q Consensus 187 ~~~~~~~~--------gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaiidp~----~~~g~~~~~~rg------~g~~f 248 (374)
.++++... |+ .+....+......+.+.+.+||+.||+...++-. .|.|+....... .-.+|
T Consensus 79 ~~l~~~~~~~~~~~~~~~-~~t~~~~~~~~~~~~~~~~~~l~~lP~~~~~~~~~~~~vHag~~~~~~~~~~~~~~~~~~~ 157 (234)
T cd07423 79 NKLYRKLQGRNVKITHGL-EETVAQLEAESEEFKEEVIEFYESLPSHLVLDEGKLVVAHAGIKEEMIGRDSKRVRSFALY 157 (234)
T ss_pred HHHHHHhcCCCccccCcc-cchHHHHhhccHHHHHHHHHHHHhCCcEEEeCCCcEEEEeCCCChHhccccchhheeeeec
Confidence 98766432 22 2233444433456778889999999998876321 133432211000 00122
Q ss_pred CH----------HHHHHHHHH-CCCcEEEEeccCCCCcCCCCCcccccCCe
Q 017303 249 GP----------DSTEEFLKK-FSLKLIIRSHEGPDARQKRPDLAGMDNGY 288 (374)
Q Consensus 249 g~----------~~~~~fl~~-~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy 288 (374)
+. .....|.+. .+.+.+|+||++........+.+++++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~GHt~~~~~~~~~~~i~IDtGa 208 (234)
T cd07423 158 GDTTGETDEFGLPVRRDWAKEYRGDALVVYGHTPVPEPRWLNNTINIDTGC 208 (234)
T ss_pred ccccCCcCCCCCccchhhHhhCCCCeEEEECCCCCccceEeCCEEEEECCC
Confidence 11 012223332 35578999999865444334455566664
No 24
>cd07421 MPP_Rhilphs Rhilph phosphatases, metallophosphatase domain. Rhilphs (Rhizobiales/ Rhodobacterales/ Rhodospirillaceae-like phosphatases) are a phylogenetically distinct group of PPP (phosphoprotein phosphatases), found only in land plants. They are named for their close relationship to to PPP phosphatases from alpha-Proteobacteria, including Rhizobiales, Rhodobacterales and Rhodospirillaceae. The PPP (phosphoprotein phosphatase) family, to which the Rhilphs belong, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central rol
Probab=99.88 E-value=1.7e-22 Score=193.99 Aligned_cols=183 Identities=19% Similarity=0.215 Sum_probs=130.8
Q ss_pred eEEEEeccCCCHHHHHHHHHHcCCC-----CCCccEEeeccccCCCCChHHHHHHHHHhhhcCCC-eEEEeccCccccce
Q 017303 117 RVVVVGDVHGQLHDVLFLLRDAGFP-----SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPH-RVYLLRGNHESKYC 190 (374)
Q Consensus 117 ~i~ViGDIHG~~~dL~~ll~~~g~~-----~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~-~v~lLRGNHE~~~~ 190 (374)
++++|||||||++.|.++|+.+... .....+||||||||||++|.+|+.+|++++..+|. ++++||||||.+++
T Consensus 3 ~iyaIGDIHG~~d~L~~lL~~I~~d~~~~~~~~~~iVfLGDyVDRGPdS~eVld~L~~l~~~~~~~~vv~LrGNHE~~~l 82 (304)
T cd07421 3 VVICVGDIHGYISKLNNLWLNLQSALGPSDFASALVIFLGDYCDRGPETRKVIDFLISLPEKHPKQRHVFLCGNHDFAFA 82 (304)
T ss_pred eEEEEEeccCCHHHHHHHHHHhhhhcCcCcCCCcEEEEeCCcCCCCCCHHHHHHHHHHhhhcccccceEEEecCChHHHH
Confidence 7999999999999999999865421 22335999999999999999999999999988876 68899999998765
Q ss_pred ecccC---------C------------------------------------------------------HHHHHHHhccc
Q 017303 191 TSVYG---------F------------------------------------------------------EKEVMAKYGDK 207 (374)
Q Consensus 191 ~~~~g---------f------------------------------------------------------~~e~~~~yg~~ 207 (374)
..... | ..+....||-.
T Consensus 83 ~fL~~~p~~~d~~~f~~~w~~~~~~~e~~~~~~~~~~~~~h~~g~~W~~~~~~~~~~~~~~~~~~~~~gg~~Tl~SYGv~ 162 (304)
T cd07421 83 AFLGVLPRPSDGSEFKSTWKEYEKNEEREGWYKGEGFENMHLQGRRWAGKMKVTFNTVRGEPYKGSIYDARPTFESYGVP 162 (304)
T ss_pred hHhhcCCCccchhhhhhhhccccccccccccccccccccccccccchhhhccccccccccccccccccCcHHHHHHcCCC
Confidence 43211 0 11334455533
Q ss_pred ------chhhhhhcccccCCCcceEE-------------------EccCccCCCCCccccCC-----------ccccCHH
Q 017303 208 ------GKHAYRKCLGCFEGLPLASL-------------------IDPSMKLGLSENTERGI-----------GLLWGPD 251 (374)
Q Consensus 208 ------~~~l~~~~~~~f~~LPlaai-------------------idp~~~~g~~~~~~rg~-----------g~~fg~~ 251 (374)
...+-+...+|++.||.... +|++..++.+...+... ..+|+++
T Consensus 163 ~~~~~l~~avP~~H~~fl~~l~~~~~~~~~~~~~~~g~~~~~lifVHAGlrPg~pLe~Q~~~L~~~d~~~p~~~~l~~R~ 242 (304)
T cd07421 163 HGSSDLIKAVPEEHKKFLRNLVWVHEEDDVCIETEEGLKHCKLIAVHAGLEKSNSVEEQLKLLRTKDTSIPKIAPLSGRK 242 (304)
T ss_pred cchHHHHHhCCHHHHHHHHhCCceEEeCcccccccccccccceEEEEcccCCCCChHHhhhhhhccccccccccccccch
Confidence 13445566889999999853 35666666665555544 6788855
Q ss_pred HHHHHHHHC-----CCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEEEeCCCCC
Q 017303 252 STEEFLKKF-----SLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYP 309 (374)
Q Consensus 252 ~~~~fl~~~-----~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~ 309 (374)
+|+..- .-.+||+||+ .....+.+++++|+|- +.+|+++++-.-|.-.
T Consensus 243 ---~f~~~~~~~~~~~~~VVhGHt--~~~~~~~~Ri~iDtGa-----~~~~~l~aa~vlp~~~ 295 (304)
T cd07421 243 ---NVWNIPQELADKKTIVVSGHH--GKLHIDGLRLIIDEGG-----GFDDRPIAAIVLPSKE 295 (304)
T ss_pred ---hhhcCcccccCCCeEEEECCC--CCceecCCEEEEECCC-----CcCCceeEEEEeccce
Confidence 455431 2368999999 4555667778899994 4578888877766543
No 25
>PRK09968 serine/threonine-specific protein phosphatase 2; Provisional
Probab=99.88 E-value=2.5e-22 Score=187.12 Aligned_cols=186 Identities=22% Similarity=0.222 Sum_probs=121.2
Q ss_pred CeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccC
Q 017303 105 NCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGN 184 (374)
Q Consensus 105 ~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGN 184 (374)
.+..+.. +..++++||||||||+.+|+++|+.+.+.+..++++|+|||||||++|.||+.+|.+ .+++.||||
T Consensus 5 ~~~~~~~-~~~~ri~visDiHg~~~~l~~~l~~~~~~~~~d~l~~lGD~vdrG~~~~~~l~~l~~------~~~~~v~GN 77 (218)
T PRK09968 5 RYQKINA-HHYRHIWVVGDIHGEYQLLQSRLHQLSFCPETDLLISVGDNIDRGPESLNVLRLLNQ------PWFISVKGN 77 (218)
T ss_pred ceeeccC-CCCCeEEEEEeccCCHHHHHHHHHhcCCCCCCCEEEECCCCcCCCcCHHHHHHHHhh------CCcEEEECc
Confidence 3445655 666799999999999999999999998655555699999999999999999999865 478999999
Q ss_pred ccccceecccCCHHHHHHHhccc--------chhhhhhcccccCCCcceEEEccC------ccCCCCCc------cccCC
Q 017303 185 HESKYCTSVYGFEKEVMAKYGDK--------GKHAYRKCLGCFEGLPLASLIDPS------MKLGLSEN------TERGI 244 (374)
Q Consensus 185 HE~~~~~~~~gf~~e~~~~yg~~--------~~~l~~~~~~~f~~LPlaaiidp~------~~~g~~~~------~~rg~ 244 (374)
||.++++....-....+...|.. .......+..++++||+...+... .|.++... .....
T Consensus 78 HE~~~~~~~~~~~~~~~~~~gg~~~~~l~~~~~~~~~~~~~~L~~LP~~~~~~~~g~~~~~vHAg~p~~~~~~~~~~~~~ 157 (218)
T PRK09968 78 HEAMALDAFETGDGNMWLASGGDWFFDLNDSEQQEATDLLLKFHHLPHIIEITNDNIKYVIAHADYPGDEYDFGKEIAES 157 (218)
T ss_pred hHHHHHHHHhcCChhHHHHccCHHHhcCCHHHHHHHHHHHHHHhcCCeEEEEeeCCCcEEEEeCCCCCchhhhccccchh
Confidence 99988764321111222222221 112233445689999999876221 13333111 01112
Q ss_pred ccccCHHHHHHHHH-----HCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEE
Q 017303 245 GLLWGPDSTEEFLK-----KFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITL 302 (374)
Q Consensus 245 g~~fg~~~~~~fl~-----~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTv 302 (374)
..+|++....+..+ ..+.+++|+|||+........+...++.|..+ +|+|..+
T Consensus 158 ~~~w~r~~~~~~~~~~~~~~~~~~~vv~GHTh~~~~~~~~~~i~IDtGs~~-----gG~Lt~~ 215 (218)
T PRK09968 158 ELLWPVDRVQKSLNGELQQINGADYFIFGHMMFDNIQTFANQIYIDTGSPK-----SGRLSFY 215 (218)
T ss_pred hceeCcHHHhhCccccccccCCCCEEEECCCCcCcceeECCEEEEECCCCC-----CCceeEE
Confidence 34677554433322 25678999999986555444455667777532 4665543
No 26
>cd07424 MPP_PrpA_PrpB PrpA and PrpB, metallophosphatase domain. PrpA and PrpB are bacterial type I serine/threonine and tyrosine phosphatases thought to modulate the expression of proteins that protect the cell upon accumulation of misfolded proteins in the periplasm. The PPP (phosphoprotein phosphatase) family, to which PrpA and PrpB belong, is one of two known protein phosphatase families specific for serine and threonine. This family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all
Probab=99.87 E-value=6.9e-22 Score=182.37 Aligned_cols=176 Identities=23% Similarity=0.295 Sum_probs=120.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccC
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~g 195 (374)
++++||||||||+.+|.++++.+++.+..+.++|+|||||||+++.|++.+|.. .++++++||||.+.+....+
T Consensus 1 ~ri~~isDiHg~~~~l~~~l~~~~~~~~~d~~~~~GD~v~~g~~~~~~~~~l~~------~~~~~v~GNhe~~~~~~~~~ 74 (207)
T cd07424 1 GRDFVVGDIHGHYSLLQKALDAVGFDPARDRLISVGDLIDRGPESLACLELLLE------PWFHAVRGNHEQMAIDALRA 74 (207)
T ss_pred CCEEEEECCCCCHHHHHHHHHHcCCCCCCCEEEEeCCcccCCCCHHHHHHHHhc------CCEEEeECCChHHHHhHhhC
Confidence 479999999999999999999988754445599999999999999999999876 46899999999998876644
Q ss_pred --CHHHHHHHhccc------chhhhhhcccccCCCcceEEEcc-C-----ccCCCCCcc------------ccCCccccC
Q 017303 196 --FEKEVMAKYGDK------GKHAYRKCLGCFEGLPLASLIDP-S-----MKLGLSENT------------ERGIGLLWG 249 (374)
Q Consensus 196 --f~~e~~~~yg~~------~~~l~~~~~~~f~~LPlaaiidp-~-----~~~g~~~~~------------~rg~g~~fg 249 (374)
...+.+.+++.. ...+++.+.+||+.||+...++. . .|.|..... ......+|.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lP~~~~i~~~g~~~~~vHag~~~~~~~~~~~~~~~~~~~~~~~~w~ 154 (207)
T cd07424 75 EPLDAVRWLANGGEWFLDLPDEELRRWLALKLEQLPLAIEVETEGGKVGIVHADYPSDDWSDGVGAVTLRPEDIEELLWS 154 (207)
T ss_pred CCcchhHHHhcCCeehhhcChHHHHHHHHHHHHhCCeEEEEEeCCCEEEEECCCCCcchhhhhhhccccCcccceeeeec
Confidence 334455555543 12245667889999999998742 1 134432211 112234565
Q ss_pred HHHHHH--HHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEE
Q 017303 250 PDSTEE--FLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITL 302 (374)
Q Consensus 250 ~~~~~~--fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTv 302 (374)
++...+ +....+.++||+|||+........+...++.|..+ +|+|.++
T Consensus 155 ~~~~~~~~~~~~~~~~~iV~GHTh~~~~~~~~~~i~ID~Gsv~-----gg~Lt~~ 204 (207)
T cd07424 155 RTRIQKAQTQPIKGVDAVVHGHTPVKRPLRLGNVLYIDTGAVF-----DGNLTLL 204 (207)
T ss_pred cchhhhcCccccCCCCEEEECCCCCCcceEECCEEEEECCCCC-----CCeEEEE
Confidence 332221 11112458999999986555444555667777532 5666654
No 27
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain. This family includes bacterial, eukaryotic, and archeal proteins orthologous to the Shewanella cold-active protein-tyrosine phosphatase, CAPTPase. CAPTPase is an uncharacterized protein that belongs to the Shelph (Shewanella-like phosphatase) family of PPP (phosphoprotein phosphatases). The PPP family is one of two known protein phosphatase families specific for serine and threonine. In addition to Shelps, the PPP family also includes: PP1, PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metal
Probab=99.87 E-value=7e-22 Score=182.93 Aligned_cols=172 Identities=22% Similarity=0.271 Sum_probs=116.6
Q ss_pred EEEeccCCCHHHHHHHHHHcCCC-------CCCccEEeeccccCCCCChHHHHHHHHHhhhc---CCCeEEEeccCcccc
Q 017303 119 VVVGDVHGQLHDVLFLLRDAGFP-------SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVF---LPHRVYLLRGNHESK 188 (374)
Q Consensus 119 ~ViGDIHG~~~dL~~ll~~~g~~-------~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~---~P~~v~lLRGNHE~~ 188 (374)
+||||||||+.+|.++|+.+++. .....+||+||+||||+++.||+.+|+.++.. .+.++++|+||||.+
T Consensus 1 ~vi~DIHG~~~~l~~ll~~~~~~~~~~~~~~~~d~lv~lGD~vdrG~~~~~vl~~l~~l~~~~~~~~~~v~~l~GNHE~~ 80 (208)
T cd07425 1 VAIGDLHGDLDAFREILKGAGVIDSNDHWIGGSTHLVQLGDIFDRGPDVIEILWLLYKLEQEAAKAGGKVHFLLGNHELM 80 (208)
T ss_pred CEEeCccCCHHHHHHHHHHCCCCCccccccCCCcEEEEECCCcCCCcCHHHHHHHHHHHHHHHHhcCCeEEEeeCCCcHH
Confidence 58999999999999999998852 23445999999999999999999999998754 356899999999999
Q ss_pred ceecccCC--HHHHHHHhcc--cchhhh---hhcccccCCCcceEEEccCc--cCCCCCccccCCccc--c---CHHHHH
Q 017303 189 YCTSVYGF--EKEVMAKYGD--KGKHAY---RKCLGCFEGLPLASLIDPSM--KLGLSENTERGIGLL--W---GPDSTE 254 (374)
Q Consensus 189 ~~~~~~gf--~~e~~~~yg~--~~~~l~---~~~~~~f~~LPlaaiidp~~--~~g~~~~~~rg~g~~--f---g~~~~~ 254 (374)
.++..+.+ ..+....... ....++ ..+.+|++.||+...++... |.|..+...|+.... . ++..+.
T Consensus 81 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lP~~~~~~~~~fvHag~~~~w~r~y~~~~~~~~~~~~~~~ 160 (208)
T cd07425 81 NLCGDFRYVHPKYFNEFGGLAMRRRELFSPGGELGRWLRSKPVIVKVNDTLFVHGGLGPLWYRGYSKETSDKECAAAHLD 160 (208)
T ss_pred HHcchhccCChhHHHHHHhhhhhHHHhcCCccHHHHHHHhCCeEEEECCEEEEeCCcHHHHhhHhhhhhhhccchHHHHH
Confidence 98754322 1111111100 011222 34478999999998875321 344322211211100 0 112577
Q ss_pred HHHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEEEeC
Q 017303 255 EFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSA 305 (374)
Q Consensus 255 ~fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSa 305 (374)
++++.++.++||+|||+ ++.|... ..+|++++|.+.
T Consensus 161 ~~l~~~~~~~iv~GHTh------------~~~~~~~---~~~g~~i~ID~g 196 (208)
T cd07425 161 KVLERLGAKRMVVGHTP------------QEGGIVT---FCGGKVIRIDVG 196 (208)
T ss_pred HHHHHcCCCeEEEcCee------------eecCceE---EECCEEEEEeCC
Confidence 88999999999999998 3444421 346999999873
No 28
>PHA02239 putative protein phosphatase
Probab=99.86 E-value=6.5e-22 Score=186.35 Aligned_cols=169 Identities=21% Similarity=0.248 Sum_probs=117.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCC--CCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecc
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFP--SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSV 193 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~--~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~ 193 (374)
|++++|||||||+..|.++++.+... +.+ .+||+|||||||+.|.+++..|+.+.. .+.++++|+||||.++++..
T Consensus 1 m~~~~IsDIHG~~~~l~~ll~~i~~~~~~~d-~li~lGD~iDrG~~s~~v~~~l~~~~~-~~~~~~~l~GNHE~~~l~~~ 78 (235)
T PHA02239 1 MAIYVVPDIHGEYQKLLTIMDKINNERKPEE-TIVFLGDYVDRGKRSKDVVNYIFDLMS-NDDNVVTLLGNHDDEFYNIM 78 (235)
T ss_pred CeEEEEECCCCCHHHHHHHHHHHhhcCCCCC-EEEEecCcCCCCCChHHHHHHHHHHhh-cCCCeEEEECCcHHHHHHHH
Confidence 58999999999999999999987542 234 499999999999999999999998653 45679999999999876532
Q ss_pred cCC--------------HHHHHHHhcccc----------------------------hhhhhhcccccCCCcceEEE---
Q 017303 194 YGF--------------EKEVMAKYGDKG----------------------------KHAYRKCLGCFEGLPLASLI--- 228 (374)
Q Consensus 194 ~gf--------------~~e~~~~yg~~~----------------------------~~l~~~~~~~f~~LPlaaii--- 228 (374)
.+. ..+.+..||... ...+..+..|++.||+....
T Consensus 79 ~~~~~~~~~~~~wl~~GG~~Tl~Syg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~lp~~~~~~~~ 158 (235)
T PHA02239 79 ENVDRLSIYDIEWLSRYCIETLNSYGVSTVTLKYSSVEENLRNNYDFIKSELKKLKESDDYRKFKILMVNCRKYYKEDKY 158 (235)
T ss_pred hCchhcccchHHHHHcCCHHHHHHcCCCCccchhhHHHHHHHHhhhhhhhhhhhcccchhhHHHHHHHHhCcceEEECCE
Confidence 111 123345564220 01234556688999998877
Q ss_pred ---ccCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCC--cCCCCCcccccCCeee
Q 017303 229 ---DPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDA--RQKRPDLAGMDNGYTI 290 (374)
Q Consensus 229 ---dp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~--~~~r~~~~~v~~Gy~~ 290 (374)
|++..++.....+....++|.++ |-....-+.||+|||++.. .....+.+++|+|+.+
T Consensus 159 ifVHAGi~p~~~~~~q~~~~llWiR~----f~~~~~g~~vV~GHTp~~~~~~~~~~~~I~IDtGa~~ 221 (235)
T PHA02239 159 IFSHSGGVSWKPVEEQTIDQLIWSRD----FQPRKDGFTYVCGHTPTDSGEVEINGDMLMCDVGAVF 221 (235)
T ss_pred EEEeCCCCCCCChhhCCHhHeEEecc----cCCCCCCcEEEECCCCCCCCcccccCCEEEeecCccc
Confidence 55555554444455567889865 4333455789999998643 2233446778888643
No 29
>PRK00166 apaH diadenosine tetraphosphatase; Reviewed
Probab=99.85 E-value=4.3e-21 Score=184.57 Aligned_cols=107 Identities=19% Similarity=0.277 Sum_probs=84.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccC
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~g 195 (374)
|+++||||||||+..|.++|+++++.+..+.++|+||+|||||+|.||+.++..+ +.++++|+||||.+.+...+|
T Consensus 1 M~~~vIGDIHG~~~~l~~ll~~~~~~~~~D~li~lGDlVdrGp~s~~vl~~l~~l----~~~~~~VlGNHD~~ll~~~~g 76 (275)
T PRK00166 1 MATYAIGDIQGCYDELQRLLEKIDFDPAKDTLWLVGDLVNRGPDSLEVLRFVKSL----GDSAVTVLGNHDLHLLAVAAG 76 (275)
T ss_pred CcEEEEEccCCCHHHHHHHHHhcCCCCCCCEEEEeCCccCCCcCHHHHHHHHHhc----CCCeEEEecChhHHHHHhhcC
Confidence 5799999999999999999999987544455999999999999999999999986 357999999999988776655
Q ss_pred CHH----HHHHHhcccchhhhhhcccccCCCcceEEE
Q 017303 196 FEK----EVMAKYGDKGKHAYRKCLGCFEGLPLASLI 228 (374)
Q Consensus 196 f~~----e~~~~yg~~~~~l~~~~~~~f~~LPlaaii 228 (374)
+.. .....+- .....+.+.+|++.||+...+
T Consensus 77 ~~~~~~~~~l~~~l--~~~~~~~~~~~L~~lPl~~~~ 111 (275)
T PRK00166 77 IKRNKKKDTLDPIL--EAPDRDELLDWLRHQPLLHVD 111 (275)
T ss_pred CccccchhHHHHHH--ccccHHHHHHHHHCCCcEEEE
Confidence 431 1111111 113446678999999998874
No 30
>TIGR00668 apaH bis(5'-nucleosyl)-tetraphosphatase (symmetrical). Alternate names include diadenosine-tetraphosphatase and Ap4A hydrolase.
Probab=99.85 E-value=6.1e-21 Score=182.77 Aligned_cols=106 Identities=22% Similarity=0.291 Sum_probs=86.0
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccC
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~g 195 (374)
|.++||||||||+++|.++|+++++.+..++++|+||+|||||+|+||+.++.++. .++++|+||||.+.+...+|
T Consensus 1 m~~YvIGDIHGc~daL~~LL~~i~f~~~~D~l~~lGDlVdRGP~slevL~~l~~l~----~~~~~VlGNHD~~lL~~~~g 76 (279)
T TIGR00668 1 MATYLIGDLHGCYDELQALLERVEFDPGQDTLWLTGDLVARGPGSLEVLRYVKSLG----DAVRLVLGNHDLHLLAVFAG 76 (279)
T ss_pred CcEEEEEcccCCHHHHHHHHHHhCcCCCCCEEEEeCCccCCCCCHHHHHHHHHhcC----CCeEEEEChhHHHHHHHhcC
Confidence 57899999999999999999999987655569999999999999999999998874 46889999999998887666
Q ss_pred CH-----HHHHHHhcccchhhhhhcccccCCCcceEEE
Q 017303 196 FE-----KEVMAKYGDKGKHAYRKCLGCFEGLPLASLI 228 (374)
Q Consensus 196 f~-----~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii 228 (374)
+. +.....+ .....+.+.+|++++|+....
T Consensus 77 ~~~~~~~d~l~~~l---~a~~~~ell~wLr~lPl~i~~ 111 (279)
T TIGR00668 77 ISRNKPKDRLDPLL---EAPDADELLNWLRRQPLLQHD 111 (279)
T ss_pred CCccCchHHHHHHH---HccCHHHHHHHHHcCCcEEEe
Confidence 52 2222212 124567789999999998643
No 31
>cd07422 MPP_ApaH Escherichia coli ApaH and related proteins, metallophosphatase domain. ApaH (also known as symmetrically cleaving Ap4A hydrolase and bis(5'nucleosyl)-tetraphosphatase) is a bacterial member of the PPP (phosphoprotein phosphatase) family of serine/threonine phosphatases that hydrolyzes the nucleotide-signaling molecule diadenosine tetraphosphate (Ap(4)A) into two ADP and also hydrolyzes Ap(5)A, Gp(4)G, and other extending compounds. Null mutations in apaH result in high intracellular levels of Ap(4)A which correlate with multiple phenotypes, including a decreased expression of catabolite-repressible genes, a reduction in the expression of flagellar operons, and an increased sensitivity to UV and heat. Ap4A hydrolase is important in responding to heat shock and oxidative stress via regulating the concentration of Ap4A in bacteria. Ap4A hydrolase is also thought to play a role in siderophore production, but the mechanism by which ApaH interacts with siderophore pathwa
Probab=99.82 E-value=2.8e-20 Score=177.26 Aligned_cols=105 Identities=21% Similarity=0.289 Sum_probs=83.4
Q ss_pred EEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCH
Q 017303 118 VVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFE 197 (374)
Q Consensus 118 i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~ 197 (374)
++||||||||+.+|+++|+++++.+..++++|+||||||||+|+||+.+|+.++ .++++|+||||.+.++..+|+.
T Consensus 1 ~yvIGDIHG~~~~L~~LL~~i~~~~~~D~Li~lGDlVdRGp~s~evl~~l~~l~----~~v~~VlGNHD~~ll~~~~g~~ 76 (257)
T cd07422 1 TYAIGDIQGCYDELQRLLEKINFDPAKDRLWLVGDLVNRGPDSLETLRFVKSLG----DSAKTVLGNHDLHLLAVAAGIK 76 (257)
T ss_pred CEEEECCCCCHHHHHHHHHhcCCCCCCCEEEEecCcCCCCcCHHHHHHHHHhcC----CCeEEEcCCchHHHHHHhcCcc
Confidence 479999999999999999999986555569999999999999999999999975 5799999999999877655542
Q ss_pred H----HHHHHhcccchhhhhhcccccCCCcceEEE
Q 017303 198 K----EVMAKYGDKGKHAYRKCLGCFEGLPLASLI 228 (374)
Q Consensus 198 ~----e~~~~yg~~~~~l~~~~~~~f~~LPlaaii 228 (374)
. +....+- .....+.+.+||+++|+...+
T Consensus 77 ~~~~~~t~~~~l--~~~~~~~~~~wLr~lPl~~~~ 109 (257)
T cd07422 77 KPKKKDTLDDIL--NAPDRDELLDWLRHQPLLHRD 109 (257)
T ss_pred ccccHhHHHHHH--hccchHHHHHHHHhCCCEEEE
Confidence 1 1111111 112346778999999998876
No 32
>KOG0376 consensus Serine-threonine phosphatase 2A, catalytic subunit [General function prediction only]
Probab=99.40 E-value=1.3e-14 Score=145.71 Aligned_cols=279 Identities=20% Similarity=0.065 Sum_probs=220.2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCC
Q 017303 80 FPSVFPVDVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAW 159 (374)
Q Consensus 80 ~~~~~~~~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~ 159 (374)
..+.++..++..+++.+.+++..+||+..+.. +..--.+.++|.||.+.|+...++.- |...+.|++-|++++++.+
T Consensus 11 an~~l~~~~fd~avdlysKaI~ldpnca~~~a-nRa~a~lK~e~~~~Al~Da~kaie~d--P~~~K~Y~rrg~a~m~l~~ 87 (476)
T KOG0376|consen 11 ANEALKDKVFDVAVDLYSKAIELDPNCAIYFA-NRALAHLKVESFGGALHDALKAIELD--PTYIKAYVRRGTAVMALGE 87 (476)
T ss_pred HhhhcccchHHHHHHHHHHHHhcCCcceeeec-hhhhhheeechhhhHHHHHHhhhhcC--chhhheeeeccHHHHhHHH
Confidence 34567778888999999999999999999877 44457899999999999999999865 6666779999999999999
Q ss_pred hHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhccc----------------------
Q 017303 160 GLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLG---------------------- 217 (374)
Q Consensus 160 s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~---------------------- 217 (374)
..+.+..|..++...|+...+.|++||+..+...++|..+....++..+..++..+..
T Consensus 88 ~~~A~~~l~~~~~l~Pnd~~~~r~~~Ec~~~vs~~~fe~ai~~~~~d~~s~~~~~~~~~~~~~i~~~y~g~~le~~kvt~ 167 (476)
T KOG0376|consen 88 FKKALLDLEKVKKLAPNDPDATRKIDECNKIVSEEKFEKAILTPEGDKKSVVEMKIDEEDMDLIESDYSGPVLEDHKVTL 167 (476)
T ss_pred HHHHHHHHHHhhhcCcCcHHHHHHHHHHHHHHHHHhhhhcccCCccCCccccccccccccccccccccCCcccccchhhH
Confidence 9999999999999999999999999999988877787766554443321111111111
Q ss_pred --------------ccCCCcceEEE-------------------------ccCccCCCCCccccCCccccCHHHHHHHHH
Q 017303 218 --------------CFEGLPLASLI-------------------------DPSMKLGLSENTERGIGLLWGPDSTEEFLK 258 (374)
Q Consensus 218 --------------~f~~LPlaaii-------------------------dp~~~~g~~~~~~rg~g~~fg~~~~~~fl~ 258 (374)
-+...+.+.++ .++...|...+..++.+..|+++.+..|+.
T Consensus 168 e~vk~~~~~~~~~~~L~~k~a~~i~~~~~~~~~~l~~~ve~~~~~d~~~sv~gd~hGqfydl~nif~l~g~Ps~t~~ylf 247 (476)
T KOG0376|consen 168 EFVKTLMEVFKNQKKLPKKYAYSILDLAKTILRKLPSLVEISVPGDVKISVCGDTHGQFYDLLNIFELNGLPSETNPYLF 247 (476)
T ss_pred HHHHHHHHhhhcccccccccceeeHHHHhhHHhcCCcceEeecCCCceEEecCCccccccchhhhHhhcCCCCCcccccc
Confidence 11122222222 333344555666778888999999999999
Q ss_pred HCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCe-EEEEEEcCCCCCCCce
Q 017303 259 KFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNK-GAYIVLKPPKFDIPDF 337 (374)
Q Consensus 259 ~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~-ga~l~i~~~~~~~~~~ 337 (374)
..+..-+.+.|.-+.....+-+...++.+|...++-.++.+.++|+++.++..+-++..++|. +++..+--..+...++
T Consensus 248 ngdfv~rgs~s~e~~~~~~~~kl~~pn~~fl~rgn~Es~~m~~iy~f~~e~~~kyte~~~~~f~~~f~~LPl~~~i~~~~ 327 (476)
T KOG0376|consen 248 NGDFVDRGSWSVEVILTLFAFKLLYPNNFFLLRGNHESDNMNKIYGFEGEVKAKYTEEMFNLFSEVFIWLPLAHLINNKV 327 (476)
T ss_pred cCceeeecccceeeeeeehhhcccCCcceeeccCCccchHHHHHhCCCcchhhhhHHHHHHhhhhhhccccchhhhcCce
Confidence 999999999999877777777777788888888777788999999999999887666788887 7888877677788899
Q ss_pred EEEEecCCCCCCCCcccccccCCc
Q 017303 338 NVFEAVTPRPDVNPFYDFKNAIDS 361 (374)
Q Consensus 338 ~~f~~~~~~~~~~~~~~~~~~~~~ 361 (374)
..+....++++..+++++++..+.
T Consensus 328 ~~~hgglf~~~~v~l~d~r~i~r~ 351 (476)
T KOG0376|consen 328 LVMHGGLFSPDGVTLEDFRNIDRF 351 (476)
T ss_pred EEEecCcCCCCCccHHHHHhhhhc
Confidence 999999999999999998665553
No 33
>PF00149 Metallophos: Calcineurin-like phosphoesterase; InterPro: IPR004843 This domain is found in a diverse range of phosphoesterases [], including protein phosphoserine phosphatases, nucleotidases, sphingomyelin phosphodiesterases and 2'-3' cAMP phosphodiesterases, as well as nucleases such as bacterial SbcD or yeast MRE11. The most conserved regions in this domain centre around the metal chelating residues.; GO: 0016787 hydrolase activity; PDB: 2IAE_C 3DW8_F 3FGA_C 2IE4_C 2NYM_C 2NYL_C 3K7V_C 2NPP_C 2IE3_C 3K7W_C ....
Probab=99.14 E-value=5e-11 Score=100.90 Aligned_cols=76 Identities=28% Similarity=0.312 Sum_probs=55.7
Q ss_pred CeEEEEeccCCCHHHH---HHH-HHHcCCCCCCccEEeeccccCCCCChHHHHHHH--HHhhhcCCCeEEEeccCccccc
Q 017303 116 SRVVVVGDVHGQLHDV---LFL-LRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLL--LAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL---~~l-l~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL--~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
++|+++||+|+..... ... .+.......+ .+|++||++++|..+.+..... ...+...+..+++++||||...
T Consensus 1 ~ri~~isD~H~~~~~~~~~~~~~~~~~~~~~~d-~ii~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD~~~ 79 (200)
T PF00149_consen 1 MRILVISDLHGGYDDDSDAFRKLDEIAAENKPD-FIIFLGDLVDGGNPSEEWRAQFWFFIRLLNPKIPVYFILGNHDYYS 79 (200)
T ss_dssp EEEEEEEBBTTTHHHHCHHHHHHHHHHHHTTTS-EEEEESTSSSSSSHHHHHHHHHHHHHHHHHTTTTEEEEE-TTSSHH
T ss_pred CeEEEEcCCCCCCcchhHHHHHHHHHhccCCCC-EEEeeccccccccccccchhhhccchhhhhccccccccccccccce
Confidence 4899999999999987 333 3333333334 4999999999999988877664 4444556678999999999976
Q ss_pred eec
Q 017303 190 CTS 192 (374)
Q Consensus 190 ~~~ 192 (374)
...
T Consensus 80 ~~~ 82 (200)
T PF00149_consen 80 GNS 82 (200)
T ss_dssp HHH
T ss_pred ecc
Confidence 543
No 34
>cd00841 MPP_YfcE Escherichia coli YfcE and related proteins, metallophosphatase domain. YfcE is a manganase-dependent metallophosphatase, found in bacteria and archaea, that cleaves bis-p-nitrophenyl phosphate, thymidine 5'-monophosphate-p-nitrophenyl ester, and p-nitrophenyl phosphorylcholine, but is unable to hydrolyze 2',3 ' or 3',5' cyclic nucleic phosphodiesters, and various phosphomonoesters, including p-nitrophenyl phosphate. This family also includes the Bacilus subtilis YsnB and Methanococcus jannaschii MJ0936 proteins. This domain family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid ph
Probab=99.12 E-value=1.4e-09 Score=95.04 Aligned_cols=60 Identities=25% Similarity=0.350 Sum_probs=48.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccc
Q 017303 117 RVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 117 ~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
++.++||+||+...+.++++.+.. .+ .++++||+++++.... ++ ....+++++||||...
T Consensus 1 ~i~~isD~H~~~~~~~~~~~~~~~--~d-~ii~~GD~~~~~~~~~--------~~--~~~~~~~V~GNhD~~~ 60 (155)
T cd00841 1 KIGVISDTHGSLELLEKALELFGD--VD-LIIHAGDVLYPGPLNE--------LE--LKAPVIAVRGNCDGEV 60 (155)
T ss_pred CEEEEecCCCCHHHHHHHHHHhcC--CC-EEEECCccccccccch--------hh--cCCcEEEEeCCCCCcC
Confidence 478999999999999999998754 34 4999999999998765 11 1245999999999753
No 35
>PF12850 Metallophos_2: Calcineurin-like phosphoesterase superfamily domain; InterPro: IPR024654 Domains in this entry are members of the calcineurin-like phosphoesterase domain superfamily [].; PDB: 2GJU_A 1Z2W_A 1Z2X_B 3PSO_B 3PSN_B 1W24_A 2R17_B 3QFN_B 3QFO_A 3QFM_A ....
Probab=98.96 E-value=1.2e-08 Score=88.33 Aligned_cols=61 Identities=31% Similarity=0.526 Sum_probs=45.4
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccc
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
|+++++||+|++...+.++++.+. ..+ .++++||++++ .+++..+..+ .+++++||||...
T Consensus 1 Mki~~~sD~H~~~~~~~~~~~~~~--~~d-~vi~~GDi~~~----~~~~~~~~~~------~~~~v~GNHD~~~ 61 (156)
T PF12850_consen 1 MKIAVISDLHGNLDALEAVLEYIN--EPD-FVIILGDIFDP----EEVLELLRDI------PVYVVRGNHDNWA 61 (156)
T ss_dssp EEEEEEE--TTTHHHHHHHHHHHT--TES-EEEEES-SCSH----HHHHHHHHHH------EEEEE--CCHSTH
T ss_pred CEEEEEeCCCCChhHHHHHHHHhc--CCC-EEEECCCchhH----HHHHHHHhcC------CEEEEeCCccccc
Confidence 689999999999999999999883 234 48999999993 7777777554 5999999999644
No 36
>TIGR00040 yfcE phosphoesterase, MJ0936 family. Members of this largely uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11, and a family of uncharacterized archaeal putative phosphoesterases described by TIGR00024. In this family, the His residue in GNHD portion of the motif is not conserved. The member MJ0936, one of two from Methanococcus jannaschii, was shown (PubMed:15128743) to act on model phosphodiesterase substrates; a divalent cation was required.
Probab=98.96 E-value=1.2e-08 Score=89.86 Aligned_cols=63 Identities=17% Similarity=0.327 Sum_probs=48.7
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCC-CCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCcccc
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFP-SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~-~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 188 (374)
|++.|++|+||++.++..+++..... ..+ .++++||++ +.+++..+..+. ..++.++||||..
T Consensus 1 m~i~viSD~H~~~~~~~~~~~~~~~~~~~d-~ii~~GD~~-----~~~~~~~l~~~~----~~~~~V~GN~D~~ 64 (158)
T TIGR00040 1 MKILVISDTHGPLRATELPVELFNLESNVD-LVIHAGDLT-----SPFVLKEFEDLA----AKVIAVRGNNDGE 64 (158)
T ss_pred CEEEEEecccCCcchhHhHHHHHhhccCCC-EEEEcCCCC-----CHHHHHHHHHhC----CceEEEccCCCch
Confidence 58999999999998887777666544 344 499999999 467777776542 2499999999983
No 37
>PRK09453 phosphodiesterase; Provisional
Probab=98.91 E-value=2.7e-09 Score=96.42 Aligned_cols=69 Identities=23% Similarity=0.299 Sum_probs=54.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCC--------hHHHHHHHHHhhhcCCCeEEEeccCccc
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAW--------GLETFLLLLAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~--------s~evl~lL~~lk~~~P~~v~lLRGNHE~ 187 (374)
|++.|++|+||++.++.++++.+.....+. ++++||++|+|+. +.+++..|..+. ..+++++||||.
T Consensus 1 mri~viSD~Hg~~~~~~~~l~~~~~~~~d~-ii~lGDi~~~~~~~~~~~~~~~~~~~~~l~~~~----~~v~~V~GNhD~ 75 (182)
T PRK09453 1 MKLMFASDTHGSLPATEKALELFAQSGADW-LVHLGDVLYHGPRNPLPEGYAPKKVAELLNAYA----DKIIAVRGNCDS 75 (182)
T ss_pred CeEEEEEeccCCHHHHHHHHHHHHhcCCCE-EEEcccccccCcCCCCccccCHHHHHHHHHhcC----CceEEEccCCcc
Confidence 589999999999999999998775444444 9999999999873 466777665532 369999999997
Q ss_pred cc
Q 017303 188 KY 189 (374)
Q Consensus 188 ~~ 189 (374)
..
T Consensus 76 ~~ 77 (182)
T PRK09453 76 EV 77 (182)
T ss_pred hh
Confidence 43
No 38
>cd07379 MPP_239FB Homo sapiens 239FB and related proteins, metallophosphatase domain. 239FB (Fetal brain protein 239) is thought to play a role in central nervous system development, but its specific role in unknown. 239FB is expressed predominantly in human fetal brain from a gene located in the chromosome 11p13 region associated with the mental retardation component of the WAGR (Wilms tumor, Aniridia, Genitourinary anomalies, Mental retardation) syndrome. Orthologous brp-like (brain protein 239-like) proteins have been identified in the invertebrate amphioxus group and in vertebrates. 239FB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzyme
Probab=98.77 E-value=1.2e-07 Score=81.39 Aligned_cols=112 Identities=16% Similarity=0.165 Sum_probs=67.1
Q ss_pred eEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChH--HHHHHHHHhhhcCCCeEEEeccCccccceeccc
Q 017303 117 RVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL--ETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVY 194 (374)
Q Consensus 117 ~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~--evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~ 194 (374)
++.++||+||++. . ......+ .++++||+++++..+. +.+.++..++ . ..+++++||||....
T Consensus 1 ~i~~isD~H~~~~----~---~~~~~~D-~vi~~GD~~~~~~~~~~~~~~~~l~~~~--~-~~~~~v~GNHD~~~~---- 65 (135)
T cd07379 1 RFVCISDTHSRHR----T---ISIPDGD-VLIHAGDLTERGTLEELQKFLDWLKSLP--H-PHKIVIAGNHDLTLD---- 65 (135)
T ss_pred CEEEEeCCCCCCC----c---CcCCCCC-EEEECCCCCCCCCHHHHHHHHHHHHhCC--C-CeEEEEECCCCCcCC----
Confidence 4789999999987 1 1223334 4899999999986542 3444444432 2 236789999996421
Q ss_pred CCHHHHHHHhcccchhhhhhcccccCCCcceEEEccCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccC
Q 017303 195 GFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEG 271 (374)
Q Consensus 195 gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaiidp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~ 271 (374)
. .-+...+++-.. ......+.....+|...+.+++++.+.+++++||+.
T Consensus 66 ---------~----------------~~~~ilv~H~~p---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~GH~H 114 (135)
T cd07379 66 ---------P----------------EDTDILVTHGPP---YGHLDLVSSGQRVGCEELLNRVQRVRPKLHVFGHIH 114 (135)
T ss_pred ---------C----------------CCCEEEEECCCC---CcCccccccCcccCCHHHHHHHHHHCCcEEEEcCcC
Confidence 0 001112222110 000111111234677788889999999999999997
No 39
>cd07404 MPP_MS158 Microscilla MS158 and related proteins, metallophosphatase domain. MS158 is an uncharacterized Microscilla protein with a metallophosphatase domain. Microscilla proteins MS152, and MS153 are also included in this family. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is t
Probab=98.73 E-value=7.2e-08 Score=85.39 Aligned_cols=67 Identities=27% Similarity=0.167 Sum_probs=46.3
Q ss_pred EEEEeccCCCHHHHHHHHH-HcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCcccc
Q 017303 118 VVVVGDVHGQLHDVLFLLR-DAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 118 i~ViGDIHG~~~dL~~ll~-~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 188 (374)
+.+++|||+....+...+. .......+ .++++||+++++.....+. ++.. ...+..+++++||||..
T Consensus 1 ~~~iSDlH~~~~~~~~~~~~~~~~~~~d-~li~~GDi~~~~~~~~~~~-~~~~--~~~~~~v~~v~GNHD~~ 68 (166)
T cd07404 1 IQYLSDLHLEFEDNLADLLNFPIAPDAD-ILVLAGDIGYLTDAPRFAP-LLLA--LKGFEPVIYVPGNHEFY 68 (166)
T ss_pred CceEccccccCccccccccccCCCCCCC-EEEECCCCCCCcchHHHHH-HHHh--hcCCccEEEeCCCcceE
Confidence 4689999999887766552 22233334 4999999999987765544 2222 22345699999999985
No 40
>cd07394 MPP_Vps29 Homo sapiens Vps29 and related proteins, metallophosphatase domain. Vps29 (vacuolar sorting protein 29), also known as vacuolar membrane protein Pep11, is a subunit of the retromer complex which is responsible for the retrieval of mannose-6-phosphate receptors (MPRs) from the endosomes for retrograde transport back to the Golgi. Vps29 has a phosphoesterase fold that acts as a protein interaction scaffold for retromer complex assembly as well as a phosphatase with specificity for the cytoplasmic tail of the MPR. The retromer includes the following 5 subunits: Vps35, Vps26, Vps29, and a dimer of the sorting nexins Vps5 (Snx1), and Vps17 (Snx2). Vps29 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily incl
Probab=98.59 E-value=1.1e-06 Score=79.66 Aligned_cols=59 Identities=24% Similarity=0.336 Sum_probs=41.7
Q ss_pred eEEEEeccC-CCHH-----HHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCcccc
Q 017303 117 RVVVVGDVH-GQLH-----DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 117 ~i~ViGDIH-G~~~-----dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 188 (374)
.|.||+|+| |.-. .+.++++. ...+. ++.+||+++ .+++.++..++ ..++.++||||..
T Consensus 1 ~i~viSDtHl~~~~~~~~~~~~~~~~~---~~~d~-iih~GDi~~-----~~~~~~l~~~~----~~~~~V~GN~D~~ 65 (178)
T cd07394 1 LVLVIGDLHIPHRASDLPAKFKKLLVP---GKIQH-VLCTGNLCS-----KETYDYLKTIA----PDVHIVRGDFDEN 65 (178)
T ss_pred CEEEEEecCCCCCchhhHHHHHHHhcc---CCCCE-EEECCCCCC-----HHHHHHHHhhC----CceEEEECCCCcc
Confidence 478999999 5533 35555544 22344 999999987 67777776542 2589999999963
No 41
>cd07388 MPP_Tt1561 Thermus thermophilus Tt1561 and related proteins, metallophosphatase domain. This family includes bacterial proteins related to Tt1561 (also known as Aq1956 in Aquifex aeolicus), an uncharacterized Thermus thermophilus protein. The conserved domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets,
Probab=98.53 E-value=2.2e-07 Score=87.21 Aligned_cols=71 Identities=13% Similarity=0.144 Sum_probs=56.2
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCcccc
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 188 (374)
+++.+++||||++..|.++++.+.....+. +|++||++++|+..-++..++..+... +..++.++||||..
T Consensus 5 ~kIl~iSDiHgn~~~le~l~~~~~~~~~D~-vv~~GDl~~~g~~~~~~~~~l~~l~~l-~~pv~~V~GNhD~~ 75 (224)
T cd07388 5 RYVLATSNPKGDLEALEKLVGLAPETGADA-IVLIGNLLPKAAKSEDYAAFFRILGEA-HLPTFYVPGPQDAP 75 (224)
T ss_pred eEEEEEEecCCCHHHHHHHHHHHhhcCCCE-EEECCCCCCCCCCHHHHHHHHHHHHhc-CCceEEEcCCCChH
Confidence 589999999999999999998764444454 999999999997776676666555432 23599999999985
No 42
>cd07392 MPP_PAE1087 Pyrobaculum aerophilum PAE1087 and related proteins, metallophosphatase domain. PAE1087 is an uncharacterized Pyrobaculum aerophilum protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordina
Probab=98.53 E-value=2.9e-07 Score=82.16 Aligned_cols=66 Identities=20% Similarity=0.244 Sum_probs=45.8
Q ss_pred EEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCCh-HHHHHHHHHhhhcCCCeEEEeccCccccce
Q 017303 118 VVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-LETFLLLLAWKVFLPHRVYLLRGNHESKYC 190 (374)
Q Consensus 118 i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s-~evl~lL~~lk~~~P~~v~lLRGNHE~~~~ 190 (374)
|.++|||||++..+.. ..+.....+ .+|+.||++++|... .+.+..|..+ +..++.++||||....
T Consensus 1 i~~~sD~H~~~~~~~~--~~~~~~~~D-~vv~~GDl~~~~~~~~~~~~~~l~~~----~~p~~~v~GNHD~~~~ 67 (188)
T cd07392 1 ILAISDIHGDVEKLEA--IILKAEEAD-AVIVAGDITNFGGKEAAVEINLLLAI----GVPVLAVPGNCDTPEI 67 (188)
T ss_pred CEEEEecCCCHHHHHH--HHhhccCCC-EEEECCCccCcCCHHHHHHHHHHHhc----CCCEEEEcCCCCCHHH
Confidence 5789999999998876 222222334 499999999999763 3334334332 3459999999997643
No 43
>cd00838 MPP_superfamily metallophosphatase superfamily, metallophosphatase domain. Metallophosphatases (MPPs), also known as metallophosphoesterases, phosphodiesterases (PDEs), binuclear metallophosphoesterases, and dimetal-containing phosphoesterases (DMPs), represent a diverse superfamily of enzymes with a conserved domain containing an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. This superfamily includes: the phosphoprotein phosphatases (PPPs), Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive me
Probab=98.51 E-value=9.4e-07 Score=72.68 Aligned_cols=67 Identities=31% Similarity=0.456 Sum_probs=48.4
Q ss_pred EEEeccCCCHHHHHHHH--HHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCcc
Q 017303 119 VVVGDVHGQLHDVLFLL--RDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (374)
Q Consensus 119 ~ViGDIHG~~~dL~~ll--~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE 186 (374)
+++||+|+......... ........+ .+|++||+++.+....+........+......++++.||||
T Consensus 1 ~~~gD~h~~~~~~~~~~~~~~~~~~~~~-~vi~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GNHD 69 (131)
T cd00838 1 AVISDIHGNLEALEAVLEAALAAAEKPD-FVLVLGDLVGDGPDPEEVLAAALALLLLLGIPVYVVPGNHD 69 (131)
T ss_pred CeeecccCCccchHHHHHHHHhcccCCC-EEEECCcccCCCCCchHHHHHHHHHhhcCCCCEEEeCCCce
Confidence 47999999999888764 232223334 49999999999998877665533333344457999999999
No 44
>cd07397 MPP_DevT Myxococcus xanthus DevT and related proteins, metallophosphatase domain. DevT is a component in the C-signal response pathway in Myxococcus xanthus that stimulates the developmentally regulated expression of the FruA response regulator protein and is required for methylation of FrzCD during fruiting body formation. DevT mutants having an in-frame deletion in the devT gene, display delayed aggregation and a cell autonomous sporulation defect. DevT belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomy
Probab=98.37 E-value=4.1e-06 Score=79.26 Aligned_cols=62 Identities=27% Similarity=0.444 Sum_probs=44.9
Q ss_pred eEEEEeccCCCHHHHH-HHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccc
Q 017303 117 RVVVVGDVHGQLHDVL-FLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 117 ~i~ViGDIHG~~~dL~-~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
+++++|||||++.... +.++..+ .+ .++++||+++. +.+++..|..+ +..+++++||||...
T Consensus 2 rIa~isDiHg~~~~~~~~~l~~~~---pD-~Vl~~GDi~~~---~~~~~~~l~~l----~~p~~~V~GNHD~~~ 64 (238)
T cd07397 2 RIAIVGDVHGQWDLEDIKALHLLQ---PD-LVLFVGDFGNE---SVQLVRAISSL----PLPKAVILGNHDAWY 64 (238)
T ss_pred EEEEEecCCCCchHHHHHHHhccC---CC-EEEECCCCCcC---hHHHHHHHHhC----CCCeEEEcCCCcccc
Confidence 7899999999987642 3344332 24 49999999864 57777776654 234899999999855
No 45
>cd07400 MPP_YydB Bacillus subtilis YydB and related proteins, metallophosphatase domain. YydB (BSU40220) is an uncharacterized Bacillus subtilis protein that belongs to the following Bacillus subtilis gene cluster yydB-yydC-yydD-yydG-yydH-yydI-yydJ. YydB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productiv
Probab=98.32 E-value=6.3e-06 Score=70.95 Aligned_cols=110 Identities=22% Similarity=0.265 Sum_probs=64.2
Q ss_pred EEEEeccCCCHH----------HHHHHHHHcCCCCCCccEEeeccccCCCCCh-H-HHHHHHHHhhhcCCCeEEEeccCc
Q 017303 118 VVVVGDVHGQLH----------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-L-ETFLLLLAWKVFLPHRVYLLRGNH 185 (374)
Q Consensus 118 i~ViGDIHG~~~----------dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s-~-evl~lL~~lk~~~P~~v~lLRGNH 185 (374)
++.++|+|=... .|.++++.......+. ++++||+++.|... . +...++..++... ..+++++|||
T Consensus 1 il~isD~Hl~~~~~~~~~~~~~~l~~~~~~~~~~~~d~-vi~~GDl~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~GNH 78 (144)
T cd07400 1 ILHLSDLHFGPERKPELLALLSLLDRLLAEIKALDPDL-VVITGDLTQRGLPEEFEEAREFLDALPAPL-EPVLVVPGNH 78 (144)
T ss_pred CeEeCccCCCCCcchhHHHHHHHHHHHHHHHhccCCCE-EEECCCCCCCCCHHHHHHHHHHHHHccccC-CcEEEeCCCC
Confidence 467899992111 1222444443333444 99999999998752 2 2333444443221 2699999999
Q ss_pred cccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE-ccCccCCCCCccccCCccccCHHHHHHHHHHCCCcE
Q 017303 186 ESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI-DPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKL 264 (374)
Q Consensus 186 E~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-dp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~ 264 (374)
|. .++. +|-...+..... ... +.+...+.+++.+.++
T Consensus 79 D~-------------------------------------iv~~Hhp~~~~~~~~~~----~~~-~~~~~~~~l~~~~~~~ 116 (144)
T cd07400 79 DV-------------------------------------IVVLHHPLVPPPGSGRE----RLL-DAGDALKLLAEAGVDL 116 (144)
T ss_pred eE-------------------------------------EEEecCCCCCCCccccc----cCC-CHHHHHHHHHHcCCCE
Confidence 97 1111 332222111111 011 5667888899999999
Q ss_pred EEEeccC
Q 017303 265 IIRSHEG 271 (374)
Q Consensus 265 IIrGH~~ 271 (374)
+++||+.
T Consensus 117 ~l~GH~H 123 (144)
T cd07400 117 VLHGHKH 123 (144)
T ss_pred EEECCCC
Confidence 9999997
No 46
>cd07399 MPP_YvnB Bacillus subtilis YvnB and related proteins, metallophosphatase domain. YvnB (BSU35040) is an uncharacterized Bacillus subtilis protein with a metallophosphatase domain. This family includes bacterial and eukaryotic proteins similar to YvnB. YvnB belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for
Probab=98.28 E-value=5.1e-05 Score=70.45 Aligned_cols=145 Identities=16% Similarity=0.096 Sum_probs=69.3
Q ss_pred eEEEEeccCCCH----HHH----HHHHHHcCCCCCCccEEeeccccCCCCChH--HHH-HHHHHhhhcCCCeEEEeccCc
Q 017303 117 RVVVVGDVHGQL----HDV----LFLLRDAGFPSKNCFFVFNGDYVDRGAWGL--ETF-LLLLAWKVFLPHRVYLLRGNH 185 (374)
Q Consensus 117 ~i~ViGDIHG~~----~dL----~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~--evl-~lL~~lk~~~P~~v~lLRGNH 185 (374)
+++++||+|-.. ..+ ..+.+.+.....+. +|++||+++.+.... +.+ ..+..|.. .+--++.++|||
T Consensus 2 ~~~~~~D~q~~~~~~~~~~~~~~~~i~~~~~~~~~d~-iv~~GDl~~~~~~~~~~~~~~~~~~~l~~-~~~p~~~~~GNH 79 (214)
T cd07399 2 TLAVLPDTQYYTESYPEVFDAQTDWIVDNAEALNIAF-VLHLGDIVDDGDNDAEWEAADKAFARLDK-AGIPYSVLAGNH 79 (214)
T ss_pred EEEEecCCCcCCcCCHHHHHHHHHHHHHHHHHcCCCE-EEECCCccCCCCCHHHHHHHHHHHHHHHH-cCCcEEEECCCC
Confidence 689999999422 222 33344433223344 899999999998432 222 22222220 122388999999
Q ss_pred cccceecccCCHHHHHHHhcccchhhhhhcccccCCCcceEEE-ccCccCCCCCccccC-CccccCHHHHHHHHHHC-CC
Q 017303 186 ESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLI-DPSMKLGLSENTERG-IGLLWGPDSTEEFLKKF-SL 262 (374)
Q Consensus 186 E~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-dp~~~~g~~~~~~rg-~g~~fg~~~~~~fl~~~-~l 262 (374)
|.... -......+-.. .+ +..++-....|..... +|-...+-..+.... .....+.....+.++++ ++
T Consensus 80 D~~~~-ld~~~~~~ql~-------WL-~~~L~~~~~~~~iv~~H~p~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~~V 150 (214)
T cd07399 80 DLVLA-LEFGPRDEVLQ-------WA-NEVLKKHPDRPAILTTHAYLNCDDSRPDSIDYDSDVNDGQQIWDKLVKKNDNV 150 (214)
T ss_pred cchhh-CCCCCCHHHHH-------HH-HHHHHHCCCCCEEEEecccccCCCCcCcccccccccccHHHHHHHHHhCCCCE
Confidence 95321 11111111110 01 1111112334543333 332211111110000 01123444566778887 79
Q ss_pred cEEEEeccCC
Q 017303 263 KLIIRSHEGP 272 (374)
Q Consensus 263 ~~IIrGH~~~ 272 (374)
++++.||...
T Consensus 151 ~~v~~GH~H~ 160 (214)
T cd07399 151 FMVLSGHVHG 160 (214)
T ss_pred EEEEccccCC
Confidence 9999999963
No 47
>COG0622 Predicted phosphoesterase [General function prediction only]
Probab=98.20 E-value=4.2e-05 Score=69.02 Aligned_cols=162 Identities=19% Similarity=0.188 Sum_probs=90.9
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccC
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~g 195 (374)
|++.|++|+||...+..+..+.......+. +|.+||++..... ..+-. .....++.++||.|.....
T Consensus 2 m~ilviSDtH~~~~~~~~~~~~~~~~~~d~-vih~GD~~~~~~~-----~~l~~---~~~~~i~~V~GN~D~~~~~---- 68 (172)
T COG0622 2 MKILVISDTHGPLRAIEKALKIFNLEKVDA-VIHAGDSTSPFTL-----DALEG---GLAAKLIAVRGNCDGEVDQ---- 68 (172)
T ss_pred cEEEEEeccCCChhhhhHHHHHhhhcCCCE-EEECCCcCCccch-----HHhhc---ccccceEEEEccCCCcccc----
Confidence 689999999999976555555554445555 9999999975432 11111 0236799999999875422
Q ss_pred CHHHHHHHhcccchhhhhhcccccCCCcceEEEccCc-cCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCCCC
Q 017303 196 FEKEVMAKYGDKGKHAYRKCLGCFEGLPLASLIDPSM-KLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDA 274 (374)
Q Consensus 196 f~~e~~~~yg~~~~~l~~~~~~~f~~LPlaaiidp~~-~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~ 274 (374)
..+|-..++.-.. ..++.+-. +....+....++.+-+..+.+++|+|||...
T Consensus 69 ------------------------~~~p~~~~~~~~g~ki~l~HGh--~~~~~~~~~~l~~la~~~~~Dvli~GHTH~p- 121 (172)
T COG0622 69 ------------------------EELPEELVLEVGGVKIFLTHGH--LYFVKTDLSLLEYLAKELGADVLIFGHTHKP- 121 (172)
T ss_pred ------------------------ccCChhHeEEECCEEEEEECCC--ccccccCHHHHHHHHHhcCCCEEEECCCCcc-
Confidence 1222222221110 11111000 0001234567778888899999999999732
Q ss_pred cCCCCCcccccCCeeeeccCCCCeEEEEEeCCCCCCccccccccCCeEEEEEEcCCCCCCCceEEEE
Q 017303 275 RQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYPQFQATEERFRNKGAYIVLKPPKFDIPDFNVFE 341 (374)
Q Consensus 275 ~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~~~~~~~~~~~N~ga~l~i~~~~~~~~~~~~f~ 341 (374)
.++. .+. +++-.|.-+. +.+..+..+|++++.++. +.....++
T Consensus 122 ------------~~~~-----~~~--i~~vNPGS~s----~pr~~~~~sy~il~~~~~-~~~~~~~~ 164 (172)
T COG0622 122 ------------VAEK-----VGG--ILLVNPGSVS----GPRGGNPASYAILDVDNL-EVEVLFLE 164 (172)
T ss_pred ------------cEEE-----ECC--EEEEcCCCcC----CCCCCCCcEEEEEEcCCC-EEEEEEee
Confidence 1211 122 4444444441 134556678888887643 33444443
No 48
>cd07403 MPP_TTHA0053 Thermus thermophilus TTHA0053 and related proteins, metallophosphatase domain. TTHA0053 is an uncharacterized Thermus thermophilus protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=98.15 E-value=1.5e-05 Score=68.19 Aligned_cols=101 Identities=21% Similarity=0.266 Sum_probs=63.7
Q ss_pred EEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHH
Q 017303 119 VVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEK 198 (374)
Q Consensus 119 ~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~ 198 (374)
.|++|+||....+.++... ....+. ++++||+. .+++..+..++ ...++.++||||...
T Consensus 1 ~viSDtH~~~~~~~~~~~~--~~~~d~-ii~~GD~~------~~~~~~~~~~~---~~~~~~V~GN~D~~I--------- 59 (129)
T cd07403 1 LVISDTESPALYSPEIKVR--LEGVDL-ILSAGDLP------KEYLEYLVTML---NVPVYYVHGNHDVDI--------- 59 (129)
T ss_pred CeeccccCccccchHHHhh--CCCCCE-EEECCCCC------hHHHHHHHHHc---CCCEEEEeCCCccCE---------
Confidence 3899999998877777665 233344 99999984 34555555541 224899999999111
Q ss_pred HHHHHhcccchhhhhhcccccCCCcceEEE-ccCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccCC
Q 017303 199 EVMAKYGDKGKHAYRKCLGCFEGLPLASLI-DPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGP 272 (374)
Q Consensus 199 e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-dp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~ 272 (374)
.+. +|-.... . .......|...+.+++.+.+.+++++||+..
T Consensus 60 ---------------------------lv~H~pp~~~~--~---~~~~~~~g~~~l~~~l~~~~~~~vl~GH~H~ 102 (129)
T cd07403 60 ---------------------------LLTHAPPAGIG--D---GEDFAHRGFEAFLDFIDRFRPKLFIHGHTHL 102 (129)
T ss_pred ---------------------------EEECCCCCcCc--C---cccccccCHHHHHHHHHHHCCcEEEEcCcCC
Confidence 111 1211110 0 0011334667788888899999999999973
No 49
>cd07385 MPP_YkuE_C Bacillus subtilis YkuE and related proteins, C-terminal metallophosphatase domain. YkuE is an uncharacterized Bacillus subtilis protein with a C-terminal metallophosphatase domain and an N-terminal twin-arginine (RR) motif. An RR-signal peptide derived from the Bacillus subtilis YkuE protein can direct Tat-dependent secretion of agarase in Streptomyces lividans. This is an indication that YkuE is transported by the Bacillus subtilis Tat (Twin-arginine translocation) pathway machinery. YkuE belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-dia
Probab=98.12 E-value=5e-06 Score=76.68 Aligned_cols=71 Identities=27% Similarity=0.280 Sum_probs=51.3
Q ss_pred CeEEEEeccCCCHH----HHHHHHHHcCCCCCCccEEeeccccCCCCChH-HHHHHHHHhhhcCCCeEEEeccCccccc
Q 017303 116 SRVVVVGDVHGQLH----DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-ETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 116 ~~i~ViGDIHG~~~----dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~-evl~lL~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
+++++++|+|+... .+.++++.+.....+. +++.||++|.+.... ++..++..++. +..++++.||||...
T Consensus 2 ~~i~~~sDlH~~~~~~~~~~~~~~~~~~~~~~d~-vl~~GD~~~~~~~~~~~~~~~l~~l~~--~~~v~~v~GNHD~~~ 77 (223)
T cd07385 2 LRIAHLSDLHLGPFVSRERLERLVEKINALKPDL-VVLTGDLVDGSVDVLELLLELLKKLKA--PLGVYAVLGNHDYYS 77 (223)
T ss_pred CEEEEEeecCCCccCCHHHHHHHHHHHhccCCCE-EEEcCcccCCcchhhHHHHHHHhccCC--CCCEEEECCCccccc
Confidence 58999999998643 6677776655433444 899999999988765 55555554433 345999999999854
No 50
>PRK11340 phosphodiesterase YaeI; Provisional
Probab=98.04 E-value=1.2e-05 Score=77.50 Aligned_cols=72 Identities=17% Similarity=0.113 Sum_probs=51.6
Q ss_pred CCCeEEEEeccCCC----HHHHHHHHHHcCCCCCCccEEeeccccCCC--CChHHHHHHHHHhhhcCCCeEEEeccCccc
Q 017303 114 QDSRVVVVGDVHGQ----LHDVLFLLRDAGFPSKNCFFVFNGDYVDRG--AWGLETFLLLLAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 114 ~~~~i~ViGDIHG~----~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG--~~s~evl~lL~~lk~~~P~~v~lLRGNHE~ 187 (374)
..+++++++|||.. ...+.++++.+.-...+- +++.||++|++ ....++...|..|+...| +|.+.||||.
T Consensus 48 ~~~rI~~lSDlH~~~~~~~~~l~~~v~~i~~~~pDl-Vli~GD~~d~~~~~~~~~~~~~L~~L~~~~p--v~~V~GNHD~ 124 (271)
T PRK11340 48 APFKILFLADLHYSRFVPLSLISDAIALGIEQKPDL-ILLGGDYVLFDMPLNFSAFSDVLSPLAECAP--TFACFGNHDR 124 (271)
T ss_pred CCcEEEEEcccCCCCcCCHHHHHHHHHHHHhcCCCE-EEEccCcCCCCccccHHHHHHHHHHHhhcCC--EEEecCCCCc
Confidence 35799999999976 556777776654434444 99999999954 233455566666665444 9999999997
Q ss_pred c
Q 017303 188 K 188 (374)
Q Consensus 188 ~ 188 (374)
.
T Consensus 125 ~ 125 (271)
T PRK11340 125 P 125 (271)
T ss_pred c
Confidence 4
No 51
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=97.88 E-value=2e-05 Score=74.32 Aligned_cols=70 Identities=19% Similarity=0.234 Sum_probs=46.8
Q ss_pred CeEEEEeccCCC------HHHHHHHHHHcCCCCCCccEEeeccccCC-------CCChHHHHHHHHHhhhcCCCeEEEec
Q 017303 116 SRVVVVGDVHGQ------LHDVLFLLRDAGFPSKNCFFVFNGDYVDR-------GAWGLETFLLLLAWKVFLPHRVYLLR 182 (374)
Q Consensus 116 ~~i~ViGDIHG~------~~dL~~ll~~~g~~~~~~~~vfLGDyVDR-------G~~s~evl~lL~~lk~~~P~~v~lLR 182 (374)
|++++++|+|.. ...+.+.|+... ...+ .++++||++|. .+...+++.+|..++.. ...+++++
T Consensus 1 M~i~~iSDlHl~~~~~~~~~~~~~~l~~~~-~~~d-~l~i~GDl~d~~~g~~~~~~~~~~~~~~l~~l~~~-g~~v~~v~ 77 (241)
T PRK05340 1 MPTLFISDLHLSPERPAITAAFLRFLRGEA-RQAD-ALYILGDLFEAWIGDDDPSPFAREIAAALKALSDS-GVPCYFMH 77 (241)
T ss_pred CcEEEEeecCCCCCChhHHHHHHHHHHhhh-ccCC-EEEEccceeccccccCcCCHHHHHHHHHHHHHHHc-CCeEEEEe
Confidence 589999999954 224555554322 2233 48999999985 23346677777776532 23699999
Q ss_pred cCcccc
Q 017303 183 GNHESK 188 (374)
Q Consensus 183 GNHE~~ 188 (374)
||||..
T Consensus 78 GNHD~~ 83 (241)
T PRK05340 78 GNRDFL 83 (241)
T ss_pred CCCchh
Confidence 999964
No 52
>cd07383 MPP_Dcr2 Saccharomyces cerevisiae DCR2 phosphatase and related proteins, metallophosphatase domain. DCR2 phosphatase (Dosage-dependent Cell Cycle Regulator 2) functions together with DCR1 (Gid8) in a common pathway to accelerate initiation of DNA replication in Saccharomyces cerevisiae. Genetic analysis suggests that DCR1 functions upstream of DCR2. DCR2 interacts with and dephosphorylates Sic1, an inhibitor of mitotic cyclin/cyclin-dependent kinase complexes, which may serve to trigger the initiation of cell division. DCR2 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAP
Probab=97.80 E-value=0.00019 Score=65.59 Aligned_cols=70 Identities=16% Similarity=0.100 Sum_probs=42.5
Q ss_pred CeEEEEeccCCCHH------------HHHHHHHHcCCCCCCccEEeeccccCCCCCh---HHHHHHHHHhhhcCCCeEEE
Q 017303 116 SRVVVVGDVHGQLH------------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG---LETFLLLLAWKVFLPHRVYL 180 (374)
Q Consensus 116 ~~i~ViGDIHG~~~------------dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s---~evl~lL~~lk~~~P~~v~l 180 (374)
.++.+++|+|--.. .+..+.+.+.....+. +|++||+++.+... .+.+..++.......-.+++
T Consensus 3 ~ki~~isDlH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-vv~~GDl~~~~~~~~~~~~~~~~~~~~l~~~~~p~~~ 81 (199)
T cd07383 3 FKILQFADLHFGEGEGTCEGCEADLKTVAFIERVLDAEKPDL-VVLTGDLITGENTNDNSTSALDKAVSPMIDRKIPWAA 81 (199)
T ss_pred eEEEEEeeecccCCCCCCCcchhhHHHHHHHHHHHhhcCCCE-EEECCccccCCCCchHHHHHHHHHHHHHHHcCCCEEE
Confidence 48999999995221 1222222222223344 99999999977653 55555554432222345899
Q ss_pred eccCcc
Q 017303 181 LRGNHE 186 (374)
Q Consensus 181 LRGNHE 186 (374)
+.||||
T Consensus 82 ~~GNHD 87 (199)
T cd07383 82 TFGNHD 87 (199)
T ss_pred ECccCC
Confidence 999999
No 53
>TIGR03729 acc_ester putative phosphoesterase. Members of this protein family belong to the larger family pfam00149 (calcineurin-like phosphoesterase), a family largely defined by small motifs of metal-chelating residues. The subfamily in this model shows a good but imperfect co-occurrence in species with domain TIGR03715 that defines a novel class of signal peptide typical of the accessory secretory system.
Probab=97.75 E-value=5.7e-05 Score=71.08 Aligned_cols=68 Identities=18% Similarity=0.120 Sum_probs=47.7
Q ss_pred eEEEEeccCCCH------HHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCcccc
Q 017303 117 RVVVVGDVHGQL------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 117 ~i~ViGDIHG~~------~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 188 (374)
++.+++|+|+.+ ..|.++++.+.-...+- +|+.||++++.+.+.+.+..+..+ .+..++++.||||..
T Consensus 1 ki~~iSDlH~~~~~~~~~~~l~~~~~~~~~~~~d~-vv~~GDl~~~~~~~~~~~~~l~~~---~~~pv~~v~GNHD~~ 74 (239)
T TIGR03729 1 KIAFSSDLHIDLNHFDTEEMLETLAQYLKKQKIDH-LHIAGDISNDFQRSLPFIEKLQEL---KGIKVTFNAGNHDML 74 (239)
T ss_pred CEEEEEeecCCCCCCCHHHHHHHHHHHHHhcCCCE-EEECCccccchhhHHHHHHHHHHh---cCCcEEEECCCCCCC
Confidence 478999999653 23556666554334444 899999999877666666655543 234599999999964
No 54
>cd07396 MPP_Nbla03831 Homo sapiens Nbla03831 and related proteins, metallophosphatase domain. Nbla03831 (also known as LOC56985) is an uncharacterized Homo sapiens protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.62 E-value=0.00016 Score=69.33 Aligned_cols=73 Identities=22% Similarity=0.162 Sum_probs=46.8
Q ss_pred eEEEEeccC-C------------CHHHHHHHHHHcCCCCCCccEEeeccccCCCCC-hHHHHHHHHHhhhcCCCeEEEec
Q 017303 117 RVVVVGDVH-G------------QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAW-GLETFLLLLAWKVFLPHRVYLLR 182 (374)
Q Consensus 117 ~i~ViGDIH-G------------~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~-s~evl~lL~~lk~~~P~~v~lLR 182 (374)
++.+++|+| + ....|.++++.+.....+. +|++||+++.|.. +.+-+..+..+-...+-.++.+.
T Consensus 2 r~~~iSD~H~~~~~~~~~~~~~~~~~~l~~~i~~i~~~~~d~-vv~~GDlv~~~~~~~~~~~~~~~~~l~~l~~p~~~v~ 80 (267)
T cd07396 2 RFGIIADIQYADEDDTRPRYYRNSLEKLEEAVEEWNRESLDF-VVQLGDIIDGDNARAEEALDAVLAILDRLKGPVHHVL 80 (267)
T ss_pred eEEEEeccccccCCCcccchHHHhHHHHHHHHHHHHcCCCCE-EEECCCeecCCCchHHHHHHHHHHHHHhcCCCEEEec
Confidence 689999999 2 2456677777664333444 9999999998873 22223222221112223599999
Q ss_pred cCccccce
Q 017303 183 GNHESKYC 190 (374)
Q Consensus 183 GNHE~~~~ 190 (374)
||||....
T Consensus 81 GNHD~~~~ 88 (267)
T cd07396 81 GNHDLYNP 88 (267)
T ss_pred Cccccccc
Confidence 99998643
No 55
>cd00840 MPP_Mre11_N Mre11 nuclease, N-terminal metallophosphatase domain. Mre11 (also known as SbcD in Escherichia coli) is a subunit of the MRX protein complex. This complex includes: Mre11, Rad50, and Xrs2/Nbs1, and plays a vital role in several nuclear processes including DNA double-strand break repair, telomere length maintenance, cell cycle checkpoint control, and meiotic recombination, in eukaryotes. During double-strand break repair, the MRX complex is required to hold the two ends of a broken chromosome together. In vitro studies show that Mre11 has 3'-5' exonuclease activity on dsDNA templates and endonuclease activity on dsDNA and ssDNA templates. In addition to the N-terminal phosphatase domain, the eukaryotic MRE11 members of this family have a C-terminal DNA binding domain (not included in this alignment model). MRE11-like proteins are found in prokaryotes and archaea was well as in eukaryotes. Mre11 belongs to the metallophosphatase (MPP) superfamily. MPPs are functi
Probab=97.60 E-value=0.00011 Score=67.43 Aligned_cols=74 Identities=22% Similarity=0.248 Sum_probs=47.7
Q ss_pred eEEEEeccC-CCH--------------HHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHh-hhc--CCCeE
Q 017303 117 RVVVVGDVH-GQL--------------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAW-KVF--LPHRV 178 (374)
Q Consensus 117 ~i~ViGDIH-G~~--------------~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~l-k~~--~P~~v 178 (374)
+++.++|+| |.. ..|.++++.+.....+. +|+.||++|....+.+.+..+..+ +.. ....+
T Consensus 1 ~i~~~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-i~~~GD~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 79 (223)
T cd00840 1 RFLHTADWHLGKPLKGLSRDRRREDQFEAFEEIVELAIEEKVDF-VLIAGDLFDSNNPSPEALELLIEALRRLKEAGIPV 79 (223)
T ss_pred CeEEeccccCCccccCcCcccchHHHHHHHHHHHHHHHhcCCCE-EEECCcccCCCCCCHHHHHHHHHHHHHHHHCCCCE
Confidence 578999999 322 24666666654444444 999999999887655444433322 211 13459
Q ss_pred EEeccCcccccee
Q 017303 179 YLLRGNHESKYCT 191 (374)
Q Consensus 179 ~lLRGNHE~~~~~ 191 (374)
+++.||||.....
T Consensus 80 ~~~~GNHD~~~~~ 92 (223)
T cd00840 80 FIIAGNHDSPSRL 92 (223)
T ss_pred EEecCCCCCcccc
Confidence 9999999986543
No 56
>cd07395 MPP_CSTP1 Homo sapiens CSTP1 and related proteins, metallophosphatase domain. CSTP1 (complete S-transactivated protein 1) is an uncharacterized Homo sapiens protein with a metallophosphatase domain, that is transactivated by the complete S protein of hepatitis B virus. CSTP1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is th
Probab=97.59 E-value=0.0035 Score=59.56 Aligned_cols=72 Identities=17% Similarity=0.052 Sum_probs=42.9
Q ss_pred eEEEEeccCCCH----------------HHHHHHHHHcCC-CCCCccEEeeccccCCCCChH---HHHHHH-HHhhhc-C
Q 017303 117 RVVVVGDVHGQL----------------HDVLFLLRDAGF-PSKNCFFVFNGDYVDRGAWGL---ETFLLL-LAWKVF-L 174 (374)
Q Consensus 117 ~i~ViGDIHG~~----------------~dL~~ll~~~g~-~~~~~~~vfLGDyVDRG~~s~---evl~lL-~~lk~~-~ 174 (374)
++++++|+|--. ..|.++++.+.. .+.-+.++++||+++.|...- +....+ ..++.. .
T Consensus 6 ~f~~~sD~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~pd~ii~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (262)
T cd07395 6 YFIQGADPQLGLIKKNLEGGGDEWDEEIKLTEQAVQAINKLNPKPKFVVVCGDLVNAMPGDELRERQVSDLKDVLSLLDP 85 (262)
T ss_pred EEEEecCCccchhhccccCchhhhhhHHHHHHHHHHHHHhcCCCCCEEEEeCCcCCCCcchhhHHHHHHHHHHHHhhccC
Confidence 788999999553 235556665532 122234899999999887541 111111 112221 1
Q ss_pred CCeEEEeccCcccc
Q 017303 175 PHRVYLLRGNHESK 188 (374)
Q Consensus 175 P~~v~lLRGNHE~~ 188 (374)
+-.++.+.||||..
T Consensus 86 ~vp~~~i~GNHD~~ 99 (262)
T cd07395 86 DIPLVCVCGNHDVG 99 (262)
T ss_pred CCcEEEeCCCCCCC
Confidence 23599999999984
No 57
>cd08165 MPP_MPPE1 human MPPE1 and related proteins, metallophosphatase domain. MPPE1 is a functionally uncharacterized metallophosphatase domain-containing protein. The MPPE1 gene is located on chromosome 18 and is a candidate susceptibility gene for Bipolar disorder. MPPE1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to
Probab=97.56 E-value=0.00054 Score=60.61 Aligned_cols=44 Identities=20% Similarity=0.308 Sum_probs=27.4
Q ss_pred cEEeeccccCCCCChH-HH----HHHHHHhhhcC-CCeEEEeccCccccc
Q 017303 146 FFVFNGDYVDRGAWGL-ET----FLLLLAWKVFL-PHRVYLLRGNHESKY 189 (374)
Q Consensus 146 ~~vfLGDyVDRG~~s~-ev----l~lL~~lk~~~-P~~v~lLRGNHE~~~ 189 (374)
.+|++||++|.+.... +. +..+..+.... ...++++.||||...
T Consensus 41 ~vv~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~GNHD~~~ 90 (156)
T cd08165 41 VVFVLGDLFDEGKWSTDEEWEDYVERFKKMFGHPPDLPLHVVVGNHDIGF 90 (156)
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCcCC
Confidence 4999999999876432 22 22222221111 246999999999854
No 58
>PHA02546 47 endonuclease subunit; Provisional
Probab=97.55 E-value=0.00013 Score=72.58 Aligned_cols=73 Identities=22% Similarity=0.304 Sum_probs=47.5
Q ss_pred CeEEEEeccC-C-----------CHHHHHHHHHHcCCCCCCccEEeeccccCCC-CChHHHHHHHHH--hhh--cCCCeE
Q 017303 116 SRVVVVGDVH-G-----------QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRG-AWGLETFLLLLA--WKV--FLPHRV 178 (374)
Q Consensus 116 ~~i~ViGDIH-G-----------~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG-~~s~evl~lL~~--lk~--~~P~~v 178 (374)
|+++.++|+| | +...|.++++.+.-...+. +|+.||++|+. +.+.+++.++.. ++. ..+-.+
T Consensus 1 MKilhiSD~HLG~~~~~~~~~~~~~~~l~~ii~~a~~~~vD~-VliaGDlfD~~~~~~~~~~~~~~~~l~~~L~~~gi~v 79 (340)
T PHA02546 1 MKILLIGDQHLGVRKDDPWFQNYQLKFIKQAIEYSKAHGITT-WIQLGDTFDVRKAITQNTMNFVREKIFDLLKEAGITL 79 (340)
T ss_pred CeEEEEeeecCCCcCCChhhHHHHHHHHHHHHHHHHHcCCCE-EEECCcccCCCCCCCHHHHHHHHHHHHHHHHHCCCeE
Confidence 5899999999 4 2345566665554434444 89999999985 445555444332 111 223469
Q ss_pred EEeccCccccc
Q 017303 179 YLLRGNHESKY 189 (374)
Q Consensus 179 ~lLRGNHE~~~ 189 (374)
+++.||||...
T Consensus 80 ~~I~GNHD~~~ 90 (340)
T PHA02546 80 HVLVGNHDMYY 90 (340)
T ss_pred EEEccCCCccc
Confidence 99999999854
No 59
>TIGR00619 sbcd exonuclease SbcD. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=97.46 E-value=0.00027 Score=67.49 Aligned_cols=73 Identities=22% Similarity=0.211 Sum_probs=48.4
Q ss_pred CeEEEEeccC-CC-----------HHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHH----HHHHHhhhcCCCeEE
Q 017303 116 SRVVVVGDVH-GQ-----------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETF----LLLLAWKVFLPHRVY 179 (374)
Q Consensus 116 ~~i~ViGDIH-G~-----------~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl----~lL~~lk~~~P~~v~ 179 (374)
|+++.++|+| |. ...|.++++.+.-...+. +++.||++|+...+.+.. .++..|+...|-.++
T Consensus 1 mkilh~SD~Hlg~~~~~~~~~~~~~~~l~~l~~~~~~~~~D~-lli~GDi~d~~~p~~~~~~~~~~~l~~l~~~~~i~v~ 79 (253)
T TIGR00619 1 MRILHTSDWHLGKTLEGVSRLAEQKAFLDDLLEFAKAEQIDA-LLVAGDVFDTANPPAEAQELFNAFFRNLSDANPIPIV 79 (253)
T ss_pred CEEEEEhhhcCCCccCCCChHHHHHHHHHHHHHHHHHcCCCE-EEECCccCCCCCCCHHHHHHHHHHHHHHHhcCCceEE
Confidence 5899999999 32 234555655543333444 899999999986665443 334444433334699
Q ss_pred EeccCccccc
Q 017303 180 LLRGNHESKY 189 (374)
Q Consensus 180 lLRGNHE~~~ 189 (374)
++.||||...
T Consensus 80 ~i~GNHD~~~ 89 (253)
T TIGR00619 80 VISGNHDSAQ 89 (253)
T ss_pred EEccCCCChh
Confidence 9999999854
No 60
>PF08321 PPP5: PPP5 TPR repeat region; InterPro: IPR013235 This domain is specific to the PPP5 subfamily of serine/threonine phosphatases.; GO: 0004722 protein serine/threonine phosphatase activity, 0046872 metal ion binding; PDB: 3ICF_B 3H60_B 3H63_A 3H66_A 3H62_B 1A17_A 1S95_B 3H69_A 3H68_D 3H64_D ....
Probab=97.41 E-value=0.00034 Score=57.04 Aligned_cols=46 Identities=22% Similarity=0.309 Sum_probs=36.2
Q ss_pred CCCCHHHHHHHHHHhhhcCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEe
Q 017303 54 GMLTVEWIQDLTLTFDWSSRNLPPSEFPSVFPVDVFDTLVLTASKILHKEPNCVVI 109 (374)
Q Consensus 54 ~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~a~~il~~ep~l~~l 109 (374)
+++|.+|+.+|++.||.+ +.||..++..|+.++.++|+++|++++|
T Consensus 50 ~~it~efv~~mie~FK~~----------K~Lhkkyv~~Il~~~~~llk~~PslVeI 95 (95)
T PF08321_consen 50 EPITLEFVKAMIEWFKNQ----------KKLHKKYVYQILLEAKKLLKQLPSLVEI 95 (95)
T ss_dssp TB--HHHHHHHHHHHHCT--------------HHHHHHHHHHHHHHHHTS-SEEEE
T ss_pred CCCCHHHHHHHHHHHHhC----------CCccHHHHHHHHHHHHHHHHhCcCccCC
Confidence 469999999999999954 3689999999999999999999999986
No 61
>cd07402 MPP_GpdQ Enterobacter aerogenes GpdQ and related proteins, metallophosphatase domain. GpdQ (glycerophosphodiesterase Q, also known as Rv0805 in Mycobacterium tuberculosis) is a binuclear metallophosphoesterase from Enterobacter aerogenes that catalyzes the hydrolysis of mono-, di-, and triester substrates, including some organophosphate pesticides and products of the degradation of nerve agents. The GpdQ homolog, Rv0805, has 2',3'-cyclic nucleotide phosphodiesterase activity. GpdQ and Rv0805 belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosa
Probab=97.38 E-value=0.0005 Score=64.04 Aligned_cols=67 Identities=28% Similarity=0.384 Sum_probs=44.0
Q ss_pred eEEEEeccCCC------------HHHHHHHHHHcCCC--CCCccEEeeccccCCCCCh-HH-HHHHHHHhhhcCCCeEEE
Q 017303 117 RVVVVGDVHGQ------------LHDVLFLLRDAGFP--SKNCFFVFNGDYVDRGAWG-LE-TFLLLLAWKVFLPHRVYL 180 (374)
Q Consensus 117 ~i~ViGDIHG~------------~~dL~~ll~~~g~~--~~~~~~vfLGDyVDRG~~s-~e-vl~lL~~lk~~~P~~v~l 180 (374)
++++++|+|=. ...|.++++.+... ..+- +|++||+++.|... .+ ++..+..+ +-.++.
T Consensus 1 r~~~iSDlH~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~d~-vi~~GDl~~~~~~~~~~~~~~~l~~~----~~p~~~ 75 (240)
T cd07402 1 LLAQISDLHLRADGEGALLGVDTAASLEAVLAHINALHPRPDL-VLVTGDLTDDGSPESYERLRELLAAL----PIPVYL 75 (240)
T ss_pred CEEEEeCCccCCCCcceecCcCHHHHHHHHHHHHHhcCCCCCE-EEECccCCCCCCHHHHHHHHHHHhhc----CCCEEE
Confidence 57899999933 34567777655432 3344 89999999987632 22 22333222 345899
Q ss_pred eccCcccc
Q 017303 181 LRGNHESK 188 (374)
Q Consensus 181 LRGNHE~~ 188 (374)
++||||..
T Consensus 76 v~GNHD~~ 83 (240)
T cd07402 76 LPGNHDDR 83 (240)
T ss_pred eCCCCCCH
Confidence 99999974
No 62
>cd07391 MPP_PF1019 Pyrococcus furiosus PF1019 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to PF1019, an uncharacterized Pyrococcus furiosus protein. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for pro
Probab=97.37 E-value=0.00034 Score=62.61 Aligned_cols=58 Identities=19% Similarity=0.025 Sum_probs=32.1
Q ss_pred HHHHHHHcCCCCCCccEEeeccccCCCCCh--HHHHHHHHHhhhcCCCeEEEeccCccccc
Q 017303 131 VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG--LETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 131 L~~ll~~~g~~~~~~~~vfLGDyVDRG~~s--~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
+.++.+.+.....+. +|++||+++..... .+...+-+.........+++++||||...
T Consensus 30 ~~~l~~~~~~~~~d~-lii~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~GNHD~~~ 89 (172)
T cd07391 30 LERLDRLIEEYGPER-LIILGDLKHSFGGLSRQEFEEVAFLRLLAKDVDVILIRGNHDGGL 89 (172)
T ss_pred HHHHHHHHHhcCCCE-EEEeCcccccccccCHHHHHHHHHHHhccCCCeEEEEcccCccch
Confidence 344444433333344 99999999865432 22222101111223457999999999843
No 63
>cd07401 MPP_TMEM62_N Homo sapiens TMEM62, N-terminal metallophosphatase domain. TMEM62 (transmembrane protein 62) is an uncharacterized Homo sapiens transmembrane protein with an N-terminal metallophosphatase domain. TMEM62 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=97.36 E-value=0.002 Score=61.43 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=40.5
Q ss_pred EEEEeccCCCH------HHH-HHHHHHcCCCCCCccEEeeccccCCCCCh--------H---HHHHHHHHhhhcCCCeEE
Q 017303 118 VVVVGDVHGQL------HDV-LFLLRDAGFPSKNCFFVFNGDYVDRGAWG--------L---ETFLLLLAWKVFLPHRVY 179 (374)
Q Consensus 118 i~ViGDIHG~~------~dL-~~ll~~~g~~~~~~~~vfLGDyVDRG~~s--------~---evl~lL~~lk~~~P~~v~ 179 (374)
++.++|||-.. ... ..+++.+.....+- +|++||++|++... . +.+..+..+....+..++
T Consensus 2 ~~~iSDlH~g~~~~~~~~~~~~~~~~~i~~~~pd~-i~~~GD~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (256)
T cd07401 2 FVHISDIHVSSFHPPNRAQDETFCSNFIDVIKPAL-VLATGDLTDNKTGNKLPSYQYQEEWQKYYNILKESSVINKEKWF 80 (256)
T ss_pred EEEecccccCCcCchhhhhHHHHHHHHHHhhCCCE-EEEccccccccccCCCcccccHHHHHHHHHHHHHhCCCCcceEE
Confidence 56789999421 112 22344333323344 89999999986521 1 222222222223346799
Q ss_pred EeccCccccc
Q 017303 180 LLRGNHESKY 189 (374)
Q Consensus 180 lLRGNHE~~~ 189 (374)
.++||||...
T Consensus 81 ~v~GNHD~~~ 90 (256)
T cd07401 81 DIRGNHDLFN 90 (256)
T ss_pred EeCCCCCcCC
Confidence 9999999953
No 64
>PRK11148 cyclic 3',5'-adenosine monophosphate phosphodiesterase; Provisional
Probab=97.35 E-value=0.0006 Score=65.56 Aligned_cols=72 Identities=18% Similarity=0.183 Sum_probs=46.3
Q ss_pred CCCeEEEEeccC-C-----------CHHHHHHHHHHcC-CC-CCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEE
Q 017303 114 QDSRVVVVGDVH-G-----------QLHDVLFLLRDAG-FP-SKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVY 179 (374)
Q Consensus 114 ~~~~i~ViGDIH-G-----------~~~dL~~ll~~~g-~~-~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~ 179 (374)
..++++.|+|+| . ....|.++++.+. .. ..+- +|+.||+++.|. .+-...+...-...+..++
T Consensus 13 ~~~~i~~iSD~Hl~~~~~~~~~~~~~~~~l~~~i~~i~~~~~~~D~-vvitGDl~~~~~--~~~~~~~~~~l~~l~~Pv~ 89 (275)
T PRK11148 13 ARVRILQITDTHLFADEHETLLGVNTWESYQAVLEAIRAQQHEFDL-IVATGDLAQDHS--SEAYQHFAEGIAPLRKPCV 89 (275)
T ss_pred CCEEEEEEcCcccCCCCCCceeccCHHHHHHHHHHHHHhhCCCCCE-EEECCCCCCCCC--HHHHHHHHHHHhhcCCcEE
Confidence 447899999999 1 2456777777653 22 2344 899999999874 2222222221112234599
Q ss_pred EeccCcccc
Q 017303 180 LLRGNHESK 188 (374)
Q Consensus 180 lLRGNHE~~ 188 (374)
.+.||||..
T Consensus 90 ~v~GNHD~~ 98 (275)
T PRK11148 90 WLPGNHDFQ 98 (275)
T ss_pred EeCCCCCCh
Confidence 999999973
No 65
>cd00844 MPP_Dbr1_N Dbr1 RNA lariat debranching enzyme, N-terminal metallophosphatase domain. Dbr1 is an RNA lariat debranching enzyme that hydrolyzes 2'-5' phosphodiester bonds at the branch points of excised intron lariats. This alignment model represents the N-terminal metallophosphatase domain of Dbr1. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal s
Probab=97.32 E-value=0.00054 Score=65.87 Aligned_cols=69 Identities=20% Similarity=0.297 Sum_probs=43.6
Q ss_pred EEEEeccCCCHHHHHHHHHHc---CCCCCCccEEeeccccCCCCCh-HHHH-------------HHHHHhhhcCCCeEEE
Q 017303 118 VVVVGDVHGQLHDVLFLLRDA---GFPSKNCFFVFNGDYVDRGAWG-LETF-------------LLLLAWKVFLPHRVYL 180 (374)
Q Consensus 118 i~ViGDIHG~~~dL~~ll~~~---g~~~~~~~~vfLGDyVDRG~~s-~evl-------------~lL~~lk~~~P~~v~l 180 (374)
|+|+||+||++..+...++.. ...+.+ .+|++||+-..+..+ .+.+ .++-. ....|--+++
T Consensus 1 i~v~Gd~HG~~~~~~~~~~~~~~~~~~~~D-~lI~~GDf~~~~~~~d~~~~~~p~k~~~~~~f~~~~~g-~~~~p~~t~f 78 (262)
T cd00844 1 IAVEGCCHGELDKIYETLEKIEKKEGTKVD-LLICCGDFQAVRNEADLKCMAVPPKYRKMGDFYKYYSG-EKKAPILTIF 78 (262)
T ss_pred CEEEecCCccHHHHHHHHHHHHHhcCCCCc-EEEEcCCCCCcCCcchhhhhccchhhhhhhhHHHHhcC-CccCCeeEEE
Confidence 589999999999887654432 223344 499999997544332 3222 11111 2335656899
Q ss_pred eccCcccc
Q 017303 181 LRGNHESK 188 (374)
Q Consensus 181 LRGNHE~~ 188 (374)
+.||||..
T Consensus 79 i~GNHE~~ 86 (262)
T cd00844 79 IGGNHEAS 86 (262)
T ss_pred ECCCCCCH
Confidence 99999974
No 66
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=97.31 E-value=0.0004 Score=65.16 Aligned_cols=67 Identities=15% Similarity=0.127 Sum_probs=41.7
Q ss_pred EEEeccCCCH------HHHHHHHHHcCCCCCCccEEeeccccCCC-----CC--hHHHHHHHHHhhhcCCCeEEEeccCc
Q 017303 119 VVVGDVHGQL------HDVLFLLRDAGFPSKNCFFVFNGDYVDRG-----AW--GLETFLLLLAWKVFLPHRVYLLRGNH 185 (374)
Q Consensus 119 ~ViGDIHG~~------~dL~~ll~~~g~~~~~~~~vfLGDyVDRG-----~~--s~evl~lL~~lk~~~P~~v~lLRGNH 185 (374)
++++|+|... ..+.+.+..... ..+ .++++||++|.. +. ..++..+|..|+.. +..+++++|||
T Consensus 2 ~~iSDlHl~~~~~~~~~~~l~~l~~~~~-~~d-~lii~GDi~d~~~~~~~~~~~~~~~~~~l~~L~~~-~~~v~~v~GNH 78 (231)
T TIGR01854 2 LFISDLHLSPERPDITALFLDFLREEAR-KAD-ALYILGDLFEAWIGDDDPSTLARSVAQAIRQVSDQ-GVPCYFMHGNR 78 (231)
T ss_pred eEEEecCCCCCChhHHHHHHHHHHhhhc-cCC-EEEEcCceeccccCCCCCCHHHHHHHHHHHHHHHC-CCeEEEEcCCC
Confidence 6899999532 234444443321 234 489999999952 11 13455556565432 34699999999
Q ss_pred ccc
Q 017303 186 ESK 188 (374)
Q Consensus 186 E~~ 188 (374)
|..
T Consensus 79 D~~ 81 (231)
T TIGR01854 79 DFL 81 (231)
T ss_pred chh
Confidence 964
No 67
>cd07384 MPP_Cdc1_like Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. This group also contains Saccharomyces cerevisiae TED1 (Trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), which acts together wit
Probab=97.26 E-value=0.0023 Score=57.46 Aligned_cols=44 Identities=27% Similarity=0.348 Sum_probs=28.0
Q ss_pred cEEeeccccCCCCChH--H---HHHHHHHhhhcC-----CCeEEEeccCccccc
Q 017303 146 FFVFNGDYVDRGAWGL--E---TFLLLLAWKVFL-----PHRVYLLRGNHESKY 189 (374)
Q Consensus 146 ~~vfLGDyVDRG~~s~--e---vl~lL~~lk~~~-----P~~v~lLRGNHE~~~ 189 (374)
.+|++||++|.+.... + .+..+..+.... ...+++++||||...
T Consensus 48 ~vi~lGDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~GNHD~g~ 101 (171)
T cd07384 48 VVLFLGDLFDGGRIADSEEWEEYVKRFKKIFFLPSNGLEDIPVYYVPGNHDIGY 101 (171)
T ss_pred EEEEeccccCCcEeCCHHHHHHHHHHHHHHhcccccccCCceEEEECCccccCC
Confidence 4999999999887432 2 222222221111 346999999999964
No 68
>PRK10966 exonuclease subunit SbcD; Provisional
Probab=97.25 E-value=0.00057 Score=69.73 Aligned_cols=72 Identities=22% Similarity=0.320 Sum_probs=45.4
Q ss_pred CeEEEEeccC-CC-H------HH----HHHHHHHcCCCCCCccEEeeccccCCCCChHHHH----HHHHHhhhcCCCeEE
Q 017303 116 SRVVVVGDVH-GQ-L------HD----VLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETF----LLLLAWKVFLPHRVY 179 (374)
Q Consensus 116 ~~i~ViGDIH-G~-~------~d----L~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl----~lL~~lk~~~P~~v~ 179 (374)
|+++.++|+| |. + .+ |.++.+.+.....+. +|+.||++|++..+.+.. .++..|+.. .-.++
T Consensus 1 mkilh~SDlHlG~~~~~~~~~~~~~~~l~~l~~~i~~~~~D~-viIaGDifD~~~p~~~a~~~~~~~l~~L~~~-~~~v~ 78 (407)
T PRK10966 1 MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLEQVQEHQVDA-IIVAGDIFDTGSPPSYARELYNRFVVNLQQT-GCQLV 78 (407)
T ss_pred CEEEEEcccCCCCcccCcccHHHHHHHHHHHHHHHHhcCCCE-EEECCccccCCCCcHHHHHHHHHHHHHHHhc-CCcEE
Confidence 5899999999 42 1 11 334444443334454 899999999986554332 233344322 23599
Q ss_pred EeccCccccc
Q 017303 180 LLRGNHESKY 189 (374)
Q Consensus 180 lLRGNHE~~~ 189 (374)
++.||||...
T Consensus 79 ~I~GNHD~~~ 88 (407)
T PRK10966 79 VLAGNHDSVA 88 (407)
T ss_pred EEcCCCCChh
Confidence 9999999854
No 69
>cd07380 MPP_CWF19_N Schizosaccharomyces pombe CWF19 and related proteins, N-terminal metallophosphatase domain. CWF19 cell cycle control protein (also known as CWF19-like 1 (CWF19L1) in Homo sapiens), N-terminal metallophosphatase domain. CWF19 contains C-terminal domains similar to that found in the CwfJ cell cycle control protein. The metallophosphatase domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site
Probab=97.25 E-value=0.0046 Score=54.58 Aligned_cols=116 Identities=22% Similarity=0.255 Sum_probs=72.4
Q ss_pred EEEeccCCCHHHHHHHHHHcCC-CCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCH
Q 017303 119 VVVGDVHGQLHDVLFLLRDAGF-PSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFE 197 (374)
Q Consensus 119 ~ViGDIHG~~~dL~~ll~~~g~-~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~ 197 (374)
.|+||+||+++.+..-++.... ...=+.+|++||+..-.... +.+.-+..=....|--.|++-||||
T Consensus 1 LV~G~~~G~l~~~~~kv~~~~~k~gpFd~~ic~Gdff~~~~~~-~~~~~y~~g~~~~pipTyf~ggn~~----------- 68 (150)
T cd07380 1 LVCGDVNGRLKALFEKVNTINKKKGPFDALLCVGDFFGDDEDD-EELEAYKDGSKKVPIPTYFLGGNNP----------- 68 (150)
T ss_pred CeeecCCccHHHHHHHHHHHhcccCCeeEEEEecCccCCccch-hhHHHHhcCCccCCCCEEEECCCCC-----------
Confidence 4899999999999877765321 12223489999999765555 3344444445567777999999998
Q ss_pred HHHHHHhcccchhhhhhcccccCCCcceEEE-c--cCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccC
Q 017303 198 KEVMAKYGDKGKHAYRKCLGCFEGLPLASLI-D--PSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEG 271 (374)
Q Consensus 198 ~e~~~~yg~~~~~l~~~~~~~f~~LPlaaii-d--p~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~ 271 (374)
+.-.++ + |..............+..-|...+.+.++...-++.++||..
T Consensus 69 -------------------------~~DILlTh~wP~gi~~~~~~~~~~~~~~~GS~~i~~l~~~lkPrYhf~gh~~ 120 (150)
T cd07380 69 -------------------------GVDILLTSEWPKGISKLSKVPFEETLLICGSDLIAELAKKLKPRYHFAGLEG 120 (150)
T ss_pred -------------------------CCCEEECCCCchhhhhhCCCcccccccCCCCHHHHHHHHHcCCCeEeecCCC
Confidence 111122 0 100000000000012344577889999999999999999984
No 70
>cd08163 MPP_Cdc1 Saccharomyces cerevisiae CDC1 and related proteins, metallophosphatase domain. Cdc1 (also known as XlCdc1 in Xenopus laevis) is an endoplasmic reticulum-localized transmembrane lipid phosphatase with a metallophosphatase domain facing the ER lumen. In budding yeast, the gene encoding CDC1 is essential while nonlethal mutations cause defects in Golgi inheritance and actin polarization. Cdc1 mutant cells accumulate an unidentified phospholipid, suggesting that Cdc1 is a lipid phosphatase. Cdc1 mutant cells also have highly elevated intracellular calcium levels suggesting a possible role for Cdc1 in calcium regulation. The 5' flanking region of Cdc1 is a regulatory region with conserved binding site motifs for AP1, AP2, Sp1, NF-1 and CREB. DNA polymerase delta consists of at least four subunits - Pol3, Cdc1, Cdc27, and Cdm1. Cdc1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site
Probab=97.22 E-value=0.0058 Score=58.57 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=27.0
Q ss_pred cCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeecc
Q 017303 248 WGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHD 293 (374)
Q Consensus 248 fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~ 293 (374)
-+++..+..|+..+-.+|+.||+. ++|++.|.
T Consensus 203 l~~~~s~~il~~~~P~~vfsGhdH--------------~~C~~~h~ 234 (257)
T cd08163 203 LEPSLSEVILKAVQPVIAFSGDDH--------------DYCEVVHE 234 (257)
T ss_pred cCHHHHHHHHHhhCCcEEEecCCC--------------ccceeEcc
Confidence 477888999999999999999996 67777664
No 71
>TIGR00024 SbcD_rel_arch putative phosphoesterase, SbcD/Mre11-related. Members of this uncharacterized family share a motif approximating DXH(X25)GDXXD(X25)GNHD as found in several phosphoesterases, including the nucleases SbcD and Mre11. SbcD is a subunit of the SbcCD nuclease of E. coli that can cleave DNA hairpins to unblock stalled DNA replication. All members of this family are archaeal.
Probab=97.08 E-value=0.0013 Score=61.78 Aligned_cols=68 Identities=22% Similarity=0.209 Sum_probs=41.2
Q ss_pred eEEEEeccC-CCHHH----------------HHHHHHHcCCCCCCccEEeeccccCCCCCh---HHHHHHHHHhhhcCCC
Q 017303 117 RVVVVGDVH-GQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG---LETFLLLLAWKVFLPH 176 (374)
Q Consensus 117 ~i~ViGDIH-G~~~d----------------L~~ll~~~g~~~~~~~~vfLGDyVDRG~~s---~evl~lL~~lk~~~P~ 176 (374)
+..||+|+| |--.. |.++.+.......+. +|++||+.+..... .++..++..+. .
T Consensus 16 ~~LvisDlHLG~~~~~~~~Gi~~P~~~~~~~l~rl~~li~~~~~d~-vIi~GDl~h~~~~~~~~~~~~~~l~~~~----~ 90 (225)
T TIGR00024 16 DKAVIADLHLGFERHLDEQGVMVPGFQFREIIERALSIADKYGIEA-LIINGDLKHEFKKGLEWRFIREFIEVTF----R 90 (225)
T ss_pred CeEEEEeccCCCHHHHHhcCCcCChhHHHHHHHHHHHHHhhcCCCE-EEEcCccccccCChHHHHHHHHHHHhcC----C
Confidence 788999999 53222 233333323223344 99999999755542 23333443322 4
Q ss_pred eEEEeccCccccc
Q 017303 177 RVYLLRGNHESKY 189 (374)
Q Consensus 177 ~v~lLRGNHE~~~ 189 (374)
.+++++||||...
T Consensus 91 ~v~~V~GNHD~~~ 103 (225)
T TIGR00024 91 DLILIRGNHDALI 103 (225)
T ss_pred cEEEECCCCCCcc
Confidence 7999999999754
No 72
>cd07390 MPP_AQ1575 Aquifex aeolicus AQ1575 and related proteins, metallophosphatase domain. This family includes bacterial and archeal proteins homologous to AQ1575, an uncharacterized Aquifex aeolicus protein. AQ1575 may play an accessory role in DNA repair, based on the close proximity of its gene to Holliday junction resolvasome genes. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a d
Probab=97.05 E-value=0.001 Score=59.24 Aligned_cols=40 Identities=33% Similarity=0.377 Sum_probs=29.6
Q ss_pred ccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccc
Q 017303 145 CFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 145 ~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
+.++++||++++|..+.. +.++..+ +..+++++||||...
T Consensus 44 d~vi~~GDl~~~~~~~~~-~~~l~~~----~~~~~~v~GNHD~~~ 83 (168)
T cd07390 44 DTVYHLGDFSFGGKAGTE-LELLSRL----NGRKHLIKGNHDSSL 83 (168)
T ss_pred CEEEEeCCCCCCCChHHH-HHHHHhC----CCCeEEEeCCCCchh
Confidence 349999999999986644 4444443 346999999999754
No 73
>TIGR00583 mre11 DNA repair protein (mre11). All proteins in this family for which functions are known are subunits of a nuclease complex made up of multiple proteins including MRE11 and RAD50 homologs. The functions of this nuclease complex include recombinational repair and non-homolgous end joining. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). The proteins in this family are distantly related to proteins in the SbcCD complex of bacteria.
Probab=97.03 E-value=0.0018 Score=66.01 Aligned_cols=55 Identities=16% Similarity=0.170 Sum_probs=43.2
Q ss_pred CCCeEEEEeccCCC------------HHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHH
Q 017303 114 QDSRVVVVGDVHGQ------------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLA 169 (374)
Q Consensus 114 ~~~~i~ViGDIHG~------------~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~ 169 (374)
+.+++++++|+|-- +..|.++++.+.....+- +|+.||+.|+..-|.+++..++.
T Consensus 2 ~~mKIlh~SD~HlG~~~~~~~r~~D~~~~f~eil~~a~~~~vD~-VLiaGDLFd~~~Ps~~~~~~~~~ 68 (405)
T TIGR00583 2 DTIRILVSTDNHVGYGENDPVRGDDSWNTFEEVLQIAKEQDVDM-ILLGGDLFHENKPSRKSLYQVLR 68 (405)
T ss_pred CceEEEEEcCCCCCCccCCchhhhhHHHHHHHHHHHHHHcCCCE-EEECCccCCCCCCCHHHHHHHHH
Confidence 45799999999932 567788888776555555 89999999999999888866544
No 74
>cd07393 MPP_DR1119 Deinococcus radiodurans DR1119 and related proteins, metallophosphatase domain. DR1119 is an uncharacterized Deinococcus radiodurans protein with a metallophosphatase domain. The domain present in members of this family belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordinat
Probab=96.95 E-value=0.0018 Score=60.89 Aligned_cols=65 Identities=17% Similarity=0.235 Sum_probs=38.9
Q ss_pred EEEEeccCCC---------H-----HHHHHHHHHcC--CCCCCccEEeeccccCCCCCh--HHHHHHHHHhhhcCCCeEE
Q 017303 118 VVVVGDVHGQ---------L-----HDVLFLLRDAG--FPSKNCFFVFNGDYVDRGAWG--LETFLLLLAWKVFLPHRVY 179 (374)
Q Consensus 118 i~ViGDIHG~---------~-----~dL~~ll~~~g--~~~~~~~~vfLGDyVDRG~~s--~evl~lL~~lk~~~P~~v~ 179 (374)
+++++|||-. + +-+.++.+.+. .+..+ .+|+.||+++++... .+.+.+|.++ |..++
T Consensus 1 ~~~~sDlHl~~~~~~~~~~~g~~~~~~~~~i~~~~~~~~~~~D-~viiaGDl~~~~~~~~~~~~l~~l~~l----~~~v~ 75 (232)
T cd07393 1 IFAIADLHLNLDPTKPMDVFGPEWKNHTEKIKENWDNVVAPED-IVLIPGDISWAMKLEEAKLDLAWIDAL----PGTKV 75 (232)
T ss_pred CeEEEeeccCCCCCCCCcccCccHHHHHHHHHHHHHhcCCCCC-EEEEcCCCccCCChHHHHHHHHHHHhC----CCCeE
Confidence 4789999944 2 22333333211 12344 488999999887643 2333333332 23489
Q ss_pred EeccCccc
Q 017303 180 LLRGNHES 187 (374)
Q Consensus 180 lLRGNHE~ 187 (374)
++.||||.
T Consensus 76 ~V~GNHD~ 83 (232)
T cd07393 76 LLKGNHDY 83 (232)
T ss_pred EEeCCccc
Confidence 99999997
No 75
>cd08166 MPP_Cdc1_like_1 uncharacterized subgroup related to Saccharomyces cerevisiae CDC1, metallophosphatase domain. A functionally uncharacterized subgroup related to the metallophosphatase domain of Saccharomyces cerevisiae Cdc1, S. cerevisiae Ted1 and human MPPE1. Cdc1 is an endoplasmic reticulum-localized transmembrane lipid phosphatase and is a subunit of DNA polymerase delta. TED1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1), acts together with Emp24p and Erv25p in cargo exit from the ER. The MPPE1 gene is a candidate susceptibility gene for Bipolar disorder. Proteins in this uncharacterized subgroup belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like R
Probab=96.94 E-value=0.0052 Score=56.55 Aligned_cols=94 Identities=15% Similarity=0.285 Sum_probs=57.4
Q ss_pred EEeeccccCCCCCh--HHHHHHHHHhhhcCC----CeEEEeccCccccceecccCCHHHHHHHhcccchhhhhhcccccC
Q 017303 147 FVFNGDYVDRGAWG--LETFLLLLAWKVFLP----HRVYLLRGNHESKYCTSVYGFEKEVMAKYGDKGKHAYRKCLGCFE 220 (374)
Q Consensus 147 ~vfLGDyVDRG~~s--~evl~lL~~lk~~~P----~~v~lLRGNHE~~~~~~~~gf~~e~~~~yg~~~~~l~~~~~~~f~ 220 (374)
++|+||++|.|+.+ .|....+..++-.++ ..++.+.||||.-.... ....+...+|- +.| -++.
T Consensus 46 Vi~lGDL~D~G~~~~~~e~~e~l~Rf~~If~~~~~~~~~~VpGNHDIG~~~~--~~~~~~v~RF~----~~F----i~ls 115 (195)
T cd08166 46 VIFLGDLMDEGSIANDDEYYSYVQRFINIFEVPNGTKIIYLPGDNDIGGEEE--DPIESKIRRFE----KYF----IMLS 115 (195)
T ss_pred EEEeccccCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEEEECCCCCcCCCCC--CcCHHHHHHHH----Hhh----eeee
Confidence 89999999999964 346666666654433 35889999999743211 11244555553 222 3333
Q ss_pred CCcceEEEccCccCCCCCccccCCccccCHHHHHHHHHHCCCcEEEEeccC
Q 017303 221 GLPLASLIDPSMKLGLSENTERGIGLLWGPDSTEEFLKKFSLKLIIRSHEG 271 (374)
Q Consensus 221 ~LPlaaiidp~~~~g~~~~~~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~ 271 (374)
.+|+-+ ++...+.....+....+|+-||..
T Consensus 116 H~P~~~---------------------~~~~~~~~~~~~~~p~~Ifs~H~H 145 (195)
T cd08166 116 HVPLLA---------------------EGGQALKHVVTDLDPDLIFSAHRH 145 (195)
T ss_pred cccccc---------------------cccHHHHHHHHhcCceEEEEcCcc
Confidence 333321 111145566677788999999996
No 76
>PRK04036 DNA polymerase II small subunit; Validated
Probab=96.93 E-value=0.002 Score=67.48 Aligned_cols=74 Identities=20% Similarity=0.265 Sum_probs=44.4
Q ss_pred CCCeEEEEeccC-CCH----HHHHHHHHHcC-CC-------CCCccEEeeccccCC-CCCh---------------HHHH
Q 017303 114 QDSRVVVVGDVH-GQL----HDVLFLLRDAG-FP-------SKNCFFVFNGDYVDR-GAWG---------------LETF 164 (374)
Q Consensus 114 ~~~~i~ViGDIH-G~~----~dL~~ll~~~g-~~-------~~~~~~vfLGDyVDR-G~~s---------------~evl 164 (374)
.+..+++++|+| |.- ..+..+++.+. .. ..-..+|++||++|. |.++ .++.
T Consensus 242 ~~~~i~~ISDlHlgs~~~~~~~l~~li~~L~g~~~~~~~~~~~~d~lVIaGDivd~~~~~p~~~~~~~~~~~~~~~~~l~ 321 (504)
T PRK04036 242 EKVYAVFISDVHVGSKEFLEDAFEKFIDWLNGEVGNEEEIASRVKYLIIAGDLVDGIGIYPGQEEELEIVDIYEQYEAAA 321 (504)
T ss_pred CccEEEEEcccCCCCcchhHHHHHHHHHHHhCCCccchhhhhcCCEEEEeCcccccccCCccchhhccchhhHHHHHHHH
Confidence 356799999999 653 22344444332 21 112359999999994 3221 1344
Q ss_pred HHHHHhhhcCCCeEEEeccCccccc
Q 017303 165 LLLLAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 165 ~lL~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
.+|..+.. .-.|++++||||...
T Consensus 322 ~~L~~L~~--~i~V~~ipGNHD~~~ 344 (504)
T PRK04036 322 EYLKQIPE--DIKIIISPGNHDAVR 344 (504)
T ss_pred HHHHhhhc--CCeEEEecCCCcchh
Confidence 45554432 235999999999754
No 77
>COG2129 Predicted phosphoesterases, related to the Icc protein [General function prediction only]
Probab=96.91 E-value=0.012 Score=55.04 Aligned_cols=74 Identities=26% Similarity=0.268 Sum_probs=53.4
Q ss_pred CCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeecccc--CCCCChHHHHH-HHHHhhhcCCCeEEEeccCccccce
Q 017303 115 DSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYV--DRGAWGLETFL-LLLAWKVFLPHRVYLLRGNHESKYC 190 (374)
Q Consensus 115 ~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyV--DRG~~s~evl~-lL~~lk~~~P~~v~lLRGNHE~~~~ 190 (374)
.|++..+.|+||.++.+.++++.+.-...+- +++.||+. ++|+.-.-.-+ .+..++. .-..++.++||-|...+
T Consensus 3 ~mkil~vtDlHg~~~~~~k~~~~~~~~~~D~-lviaGDlt~~~~~~~~~~~~~~~~e~l~~-~~~~v~avpGNcD~~~v 79 (226)
T COG2129 3 KMKILAVTDLHGSEDSLKKLLNAAADIRADL-LVIAGDLTYFHFGPKEVAEELNKLEALKE-LGIPVLAVPGNCDPPEV 79 (226)
T ss_pred cceEEEEeccccchHHHHHHHHHHhhccCCE-EEEecceehhhcCchHHHHhhhHHHHHHh-cCCeEEEEcCCCChHHH
Confidence 4799999999999999999998877555555 88999999 88774322211 1233331 22469999999988654
No 78
>cd00839 MPP_PAPs purple acid phosphatases of the metallophosphatase superfamily, metallophosphatase domain. Purple acid phosphatases (PAPs) belong to a diverse family of binuclear metallohydrolases that have been identified and characterized in plants, animals, and fungi. PAPs contain a binuclear metal center and their characteristic pink or purple color derives from a charge-transfer transition between a tyrosine residue and a chromophoric ferric ion within the binuclear center. PAPs catalyze the hydrolysis of a wide range of activated phosphoric acid mono- and di-esters and anhydrides. PAPs are distinguished from the other phosphatases by their insensitivity to L-(+) tartrate inhibition and are therefore also known as tartrate resistant acid phosphatases (TRAPs). While only a few copies of PAP-like genes are present in mammalian and fungal genomes, multiple copies are present in plant genomes. PAPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diver
Probab=96.82 E-value=0.0027 Score=61.03 Aligned_cols=69 Identities=17% Similarity=0.320 Sum_probs=41.5
Q ss_pred CeEEEEeccCC----CHHHHHHHHHHcCCCCCCccEEeeccccCCCCCh-----HHHHHHHHHhhhcCCCeEEEeccCcc
Q 017303 116 SRVVVVGDVHG----QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHRVYLLRGNHE 186 (374)
Q Consensus 116 ~~i~ViGDIHG----~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~~v~lLRGNHE 186 (374)
-+++|+||.|. ....+.++.+. ....+- +|++||+++.+... -+.+..+..+....| ++.++||||
T Consensus 5 ~~f~v~gD~~~~~~~~~~~~~~l~~~--~~~~d~-vl~~GDl~~~~~~~~~~~~~~~~~~~~~~~~~~P--~~~~~GNHD 79 (294)
T cd00839 5 FKFAVFGDMGQNTNNSTNTLDHLEKE--LGNYDA-ILHVGDLAYADGYNNGSRWDTFMRQIEPLASYVP--YMVTPGNHE 79 (294)
T ss_pred EEEEEEEECCCCCCCcHHHHHHHHhc--cCCccE-EEEcCchhhhcCCccchhHHHHHHHHHHHHhcCC--cEEcCcccc
Confidence 48999999995 33444444443 122334 89999999544321 122233333333445 899999999
Q ss_pred ccc
Q 017303 187 SKY 189 (374)
Q Consensus 187 ~~~ 189 (374)
...
T Consensus 80 ~~~ 82 (294)
T cd00839 80 ADY 82 (294)
T ss_pred ccc
Confidence 864
No 79
>COG1409 Icc Predicted phosphohydrolases [General function prediction only]
Probab=96.81 E-value=0.004 Score=58.96 Aligned_cols=74 Identities=24% Similarity=0.326 Sum_probs=50.3
Q ss_pred CeEEEEeccCCC------HHHHHHHHHHcCCCCCCccEEeeccccCCCCC-hHHHHHHHHHhhhcCCCeEEEeccCcccc
Q 017303 116 SRVVVVGDVHGQ------LHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAW-GLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 116 ~~i~ViGDIHG~------~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~-s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 188 (374)
++++.|+|+|-- ...+.++++.+.....+- +|+.||+.++|.. +.+-+..++. +...|..+++++||||.+
T Consensus 1 ~~i~~isD~H~~~~~~~~~~~~~~~~~~i~~~~~D~-~v~tGDl~~~~~~~~~~~~~~~l~-~~~~~~~~~~vpGNHD~~ 78 (301)
T COG1409 1 MRIAHISDLHLGALGVDSEELLEALLAAIEQLKPDL-LVVTGDLTNDGEPEEYRRLKELLA-RLELPAPVIVVPGNHDAR 78 (301)
T ss_pred CeEEEEecCcccccccchHHHHHHHHHHHhcCCCCE-EEEccCcCCCCCHHHHHHHHHHHh-hccCCCceEeeCCCCcCC
Confidence 478999999966 345666677777555555 9999999999632 2222222222 235567799999999987
Q ss_pred cee
Q 017303 189 YCT 191 (374)
Q Consensus 189 ~~~ 191 (374)
..+
T Consensus 79 ~~~ 81 (301)
T COG1409 79 VVN 81 (301)
T ss_pred chH
Confidence 654
No 80
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=96.79 E-value=0.0022 Score=58.76 Aligned_cols=69 Identities=28% Similarity=0.360 Sum_probs=37.0
Q ss_pred EEEeccC---CCHHH---HHHHHHHcCCCCCCccEEeeccccCCC-------CCh-HHHHHHHHHhhhcCCCeEEEeccC
Q 017303 119 VVVGDVH---GQLHD---VLFLLRDAGFPSKNCFFVFNGDYVDRG-------AWG-LETFLLLLAWKVFLPHRVYLLRGN 184 (374)
Q Consensus 119 ~ViGDIH---G~~~d---L~~ll~~~g~~~~~~~~vfLGDyVDRG-------~~s-~evl~lL~~lk~~~P~~v~lLRGN 184 (374)
++|+|+| +...+ +..++........+ .+|++||++|.- ... .+.+..++.+. .....++.+.||
T Consensus 1 ~~iSDlHlg~~~~~~~~~~~~~~~~~~~~~~~-~lvl~GDi~d~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~v~~v~GN 78 (217)
T cd07398 1 LFISDLHLGDGGPAADFLLLFLLAALALGEAD-ALYLLGDIFDLWFGDDEVVPPAAHEVLAALLRLA-DRGTRVYYVPGN 78 (217)
T ss_pred CEeeeecCCCCCCCHHHHHHHHHhhhccCCCC-EEEEeccEEEEEecCCCCCChHHHHHHHHHHHHH-HCCCeEEEECCC
Confidence 4899999 22222 22222221112233 499999999841 111 22223333322 234579999999
Q ss_pred ccccc
Q 017303 185 HESKY 189 (374)
Q Consensus 185 HE~~~ 189 (374)
||...
T Consensus 79 HD~~~ 83 (217)
T cd07398 79 HDFLL 83 (217)
T ss_pred chHHH
Confidence 99864
No 81
>cd00845 MPP_UshA_N_like Escherichia coli UshA-like family, N-terminal metallophosphatase domain. This family includes the bacterial enzyme UshA, and related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich
Probab=96.64 E-value=0.0034 Score=59.16 Aligned_cols=66 Identities=21% Similarity=0.292 Sum_probs=45.1
Q ss_pred eEEEEeccCCCH---------HHHHHHHHHcCCCCCCccEEeeccccCCCCChH-----HHHHHHHHhhhcCCCeEEEec
Q 017303 117 RVVVVGDVHGQL---------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-----ETFLLLLAWKVFLPHRVYLLR 182 (374)
Q Consensus 117 ~i~ViGDIHG~~---------~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~-----evl~lL~~lk~~~P~~v~lLR 182 (374)
+++.++|+||.+ ..|..++++..-...+..++..||+++..+.+. .++..|-++. --++..
T Consensus 2 ~i~~~sD~hg~~~~~~~~~g~~~l~~~v~~~~~~~~~~l~v~~GD~~~~~~~~~~~~~~~~~~~l~~~g-----~d~~~~ 76 (252)
T cd00845 2 TILHTNDLHGHFEPAGGVGGAARLATLIKEERAENENTLLLDAGDNFDGSPPSTATKGEANIELMNALG-----YDAVTI 76 (252)
T ss_pred EEEEecccccCccccCCcCCHHHHHHHHHHHHhcCCCeEEEeCCccCCCccchhccCCcHHHHHHHhcC-----CCEEee
Confidence 688999999887 566777776654334444788999999887653 4555554432 233556
Q ss_pred cCccc
Q 017303 183 GNHES 187 (374)
Q Consensus 183 GNHE~ 187 (374)
||||.
T Consensus 77 GNHe~ 81 (252)
T cd00845 77 GNHEF 81 (252)
T ss_pred ccccc
Confidence 99996
No 82
>cd07386 MPP_DNA_pol_II_small_archeal_C archeal DNA polymerase II, small subunit, C-terminal metallophosphatase domain. The small subunit of the archeal DNA polymerase II contains a C-terminal metallophosphatase domain. This domain is thought to be functionally active because the active site residues required for phosphoesterase activity in other members of this superfamily are intact. The archeal replicative DNA polymerases are thought to possess intrinsic phosphatase activity that hydrolyzes the pyrophosphate released during nucleotide polymerization. This domain belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiestera
Probab=96.57 E-value=0.0036 Score=59.02 Aligned_cols=69 Identities=22% Similarity=0.276 Sum_probs=38.7
Q ss_pred EEEeccC--CCH---HHHHHHHHHc-CCCC---CCccEEeeccccCCCCC---------------h-HHHHHHHHHhhhc
Q 017303 119 VVVGDVH--GQL---HDVLFLLRDA-GFPS---KNCFFVFNGDYVDRGAW---------------G-LETFLLLLAWKVF 173 (374)
Q Consensus 119 ~ViGDIH--G~~---~dL~~ll~~~-g~~~---~~~~~vfLGDyVDRG~~---------------s-~evl~lL~~lk~~ 173 (374)
++|+|+| +.. ..+..+++.+ +..+ .-..+|++||++|+... . .++..++..|..
T Consensus 2 ~~iSDlHl~~~~~~~~~~~~l~~~l~~~~~~~~~~d~lvi~GDl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L~~- 80 (243)
T cd07386 2 VFISDVHVGSKTFLEDAFEKFVRWLNGEDDSASRVKYLIIAGDLVDGIGVYPGQEEELEILDIYEQYEEAAEYLSDVPS- 80 (243)
T ss_pred EEecccCCCchhhhHHHHHHHHHHHcCCcccccCccEEEEeCCcccccccCCcchhhhhhhhHHHHHHHHHHHHHhccc-
Confidence 6899999 432 2223334332 2211 22359999999997320 0 123333333332
Q ss_pred CCCeEEEeccCccccc
Q 017303 174 LPHRVYLLRGNHESKY 189 (374)
Q Consensus 174 ~P~~v~lLRGNHE~~~ 189 (374)
.-.|+++.||||...
T Consensus 81 -~~~v~~ipGNHD~~~ 95 (243)
T cd07386 81 -HIKIIIIPGNHDAVR 95 (243)
T ss_pred -CCeEEEeCCCCCccc
Confidence 246999999999853
No 83
>COG4186 Predicted phosphoesterase or phosphohydrolase [General function prediction only]
Probab=96.54 E-value=0.02 Score=50.74 Aligned_cols=69 Identities=17% Similarity=0.146 Sum_probs=40.4
Q ss_pred eEEEEeccC------------CCHHHHHHH-HHHc-C-CCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEe
Q 017303 117 RVVVVGDVH------------GQLHDVLFL-LRDA-G-FPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLL 181 (374)
Q Consensus 117 ~i~ViGDIH------------G~~~dL~~l-l~~~-g-~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lL 181 (374)
.++.+||+| -++.....+ +... . ..+++ .+.+|||+.-.-..--+..+++-+| +.+++++
T Consensus 5 mmyfisDtHfgh~nvi~~~pfsn~~ehd~vil~N~nntv~p~D-~lwhLGDl~~~~n~~~~a~~IlerL----nGrkhlv 79 (186)
T COG4186 5 MMYFISDTHFGHKNVISMRPFSNPDEHDEVILSNWNNTVGPDD-VLWHLGDLSSGANRERAAGLILERL----NGRKHLV 79 (186)
T ss_pred EEEEecccccCCcceeecCCCCCHHHHhHHHHHhHHhcCCccc-eEEEecccccccchhhHHHHHHHHc----CCcEEEe
Confidence 478889988 233333222 2111 1 12334 4889999985444333444444443 5889999
Q ss_pred ccCccccce
Q 017303 182 RGNHESKYC 190 (374)
Q Consensus 182 RGNHE~~~~ 190 (374)
+|||+----
T Consensus 80 ~GNhDk~~~ 88 (186)
T COG4186 80 PGNHDKCHP 88 (186)
T ss_pred eCCCCCCcc
Confidence 999987543
No 84
>COG0420 SbcD DNA repair exonuclease [DNA replication, recombination, and repair]
Probab=96.34 E-value=0.0074 Score=60.91 Aligned_cols=76 Identities=24% Similarity=0.248 Sum_probs=53.0
Q ss_pred CeEEEEeccC-C------------CHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHH-hhhcCC--CeEE
Q 017303 116 SRVVVVGDVH-G------------QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLA-WKVFLP--HRVY 179 (374)
Q Consensus 116 ~~i~ViGDIH-G------------~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~-lk~~~P--~~v~ 179 (374)
|++.-++|+| | .+.+|..+++.+--...+- +|.-||+.|++.-|.+++..+.. ++.... --||
T Consensus 1 mkilHtSD~HLG~~~~~~~~r~~d~~~~f~~~l~~a~~~~vD~-vliAGDlFd~~~Ps~~a~~~~~~~l~~l~~~~Ipv~ 79 (390)
T COG0420 1 MKILHTSDWHLGSKQLNLPSRLEDQKKAFDELLEIAKEEKVDF-VLIAGDLFDTNNPSPRALKLFLEALRRLKDAGIPVV 79 (390)
T ss_pred CeeEEecccccchhhccCccchHHHHHHHHHHHHHHHHccCCE-EEEccccccCCCCCHHHHHHHHHHHHHhccCCCcEE
Confidence 5788899999 4 2445555555554444455 89999999999888888777654 333221 2599
Q ss_pred EeccCccccceec
Q 017303 180 LLRGNHESKYCTS 192 (374)
Q Consensus 180 lLRGNHE~~~~~~ 192 (374)
++.||||...-..
T Consensus 80 ~I~GNHD~~~~~~ 92 (390)
T COG0420 80 VIAGNHDSPSRLS 92 (390)
T ss_pred EecCCCCchhccc
Confidence 9999999976443
No 85
>COG1408 Predicted phosphohydrolases [General function prediction only]
Probab=96.21 E-value=0.012 Score=57.36 Aligned_cols=74 Identities=30% Similarity=0.363 Sum_probs=48.9
Q ss_pred CCCeEEEEeccCCCHHH--HHHHHHHcCCCCCCccEEeeccccCC-CCCh-HHHHHHHHHhhhcCCCeEEEeccCccccc
Q 017303 114 QDSRVVVVGDVHGQLHD--VLFLLRDAGFPSKNCFFVFNGDYVDR-GAWG-LETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 114 ~~~~i~ViGDIHG~~~d--L~~ll~~~g~~~~~~~~vfLGDyVDR-G~~s-~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
...+++-++|+|-.... ..+.+........ +.+++.|||+|+ .+.. ..++..|..|+. |-.+|.+-||||...
T Consensus 43 ~~~~iv~lSDlH~~~~~~~~~~~~~~i~~~~~-DlivltGD~~~~~~~~~~~~~~~~L~~L~~--~~gv~av~GNHd~~~ 119 (284)
T COG1408 43 QGLKIVQLSDLHSLPFREEKLALLIAIANELP-DLIVLTGDYVDGDRPPGVAALALFLAKLKA--PLGVFAVLGNHDYGV 119 (284)
T ss_pred CCeEEEEeehhhhchhhHHHHHHHHHHHhcCC-CEEEEEeeeecCCCCCCHHHHHHHHHhhhc--cCCEEEEeccccccc
Confidence 34579999999976654 2333333333333 459999999995 5544 445555555544 456999999998865
Q ss_pred e
Q 017303 190 C 190 (374)
Q Consensus 190 ~ 190 (374)
-
T Consensus 120 ~ 120 (284)
T COG1408 120 D 120 (284)
T ss_pred c
Confidence 3
No 86
>KOG3662 consensus Cell division control protein/predicted DNA repair exonuclease [Replication, recombination and repair]
Probab=96.13 E-value=0.018 Score=58.38 Aligned_cols=74 Identities=22% Similarity=0.335 Sum_probs=49.6
Q ss_pred CCCeEEEEeccC--C---------------CHHHHHHHHHHcCCCCCCccEEeeccccCCCCCh--HHHHHHHHHhhhcC
Q 017303 114 QDSRVVVVGDVH--G---------------QLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG--LETFLLLLAWKVFL 174 (374)
Q Consensus 114 ~~~~i~ViGDIH--G---------------~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s--~evl~lL~~lk~~~ 174 (374)
..-++..|+|-| | +=.-|.+.++..-+.-.-+..+||||++|-|.+. -|=-....++|..|
T Consensus 47 n~~ki~~vaDPQilg~~~~~~~~~~Ldk~~~D~~lrr~f~~~~~~lkPdvvffLGDLfDeG~~~~~eEf~~~~~RfkkIf 126 (410)
T KOG3662|consen 47 NSTKILLVADPQILGNWPKKFLVSWLDKYGNDWYLRRSFDMSQWRLKPDVVFFLGDLFDEGQWAGDEEFKKRYERFKKIF 126 (410)
T ss_pred CceEEEEecCchhcCCCCCccccchHHhhhhHHHHHHHHHHHHhccCCCEEEEeccccccCccCChHHHHHHHHHHHHhh
Confidence 345788899966 4 2223445555554443334489999999999874 34445566666666
Q ss_pred CC----eEEEeccCccc
Q 017303 175 PH----RVYLLRGNHES 187 (374)
Q Consensus 175 P~----~v~lLRGNHE~ 187 (374)
+. .+..+.||||-
T Consensus 127 ~~k~~~~~~~i~GNhDI 143 (410)
T KOG3662|consen 127 GRKGNIKVIYIAGNHDI 143 (410)
T ss_pred CCCCCCeeEEeCCcccc
Confidence 64 68999999998
No 87
>cd08164 MPP_Ted1 Saccharomyces cerevisiae Ted1 and related proteins, metallophosphatase domain. Saccharomyces cerevisiae Ted1 (trafficking of Emp24p/Erv25p-dependent cargo disrupted 1) is a metallophosphatase domain-containing protein which acts together with Emp24p and Erv25p in cargo exit from the ER. Ted1 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the
Probab=95.73 E-value=0.019 Score=52.81 Aligned_cols=67 Identities=18% Similarity=0.085 Sum_probs=42.9
Q ss_pred ccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHH-HHHHHHhhhcC---------------------CCeEEE
Q 017303 123 DVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLET-FLLLLAWKVFL---------------------PHRVYL 180 (374)
Q Consensus 123 DIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~ev-l~lL~~lk~~~---------------------P~~v~l 180 (374)
|++|+=.=|.++++.+-..-.-..++||||++|.|--+-+- -.....++-.+ ...+++
T Consensus 24 d~~~~D~YL~~~~~~~~~~l~Pd~V~fLGDLfd~~w~~D~ef~~~~~RF~~if~~~~~~~~~~~~~~~~~~~~~~i~~i~ 103 (193)
T cd08164 24 DLFGNDYFLGHIVSMMQFWLKPDAVVVLGDLFSSQWIDDEEFAKRADRYRRRFFGRNDWQVGNISLAARTFEDGKTPLIN 103 (193)
T ss_pred hhhhhHHHHHHHHHHHHHhcCCCEEEEeccccCCCcccHHHHHHHHHHHHHHhcCCcccccccccccccccccCCceEEE
Confidence 55777777888887665433333489999999987544332 23333433332 135789
Q ss_pred eccCccccc
Q 017303 181 LRGNHESKY 189 (374)
Q Consensus 181 LRGNHE~~~ 189 (374)
|.||||.-.
T Consensus 104 V~GNHDIG~ 112 (193)
T cd08164 104 IAGNHDVGY 112 (193)
T ss_pred ECCcccCCC
Confidence 999999843
No 88
>PLN02533 probable purple acid phosphatase
Probab=95.32 E-value=0.025 Score=58.19 Aligned_cols=70 Identities=19% Similarity=0.152 Sum_probs=40.3
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChH--H-HHHHHHHhhhcCCCeEEEeccCccccc
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL--E-TFLLLLAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~--e-vl~lL~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
-+++|+||+|-. ......++.+.....+- +|++||+++-+.+.- + -..++..+....| ++.+.||||...
T Consensus 140 ~~f~v~GDlG~~-~~~~~tl~~i~~~~pD~-vl~~GDl~y~~~~~~~wd~f~~~i~~l~s~~P--~m~~~GNHE~~~ 212 (427)
T PLN02533 140 IKFAVSGDLGTS-EWTKSTLEHVSKWDYDV-FILPGDLSYANFYQPLWDTFGRLVQPLASQRP--WMVTHGNHELEK 212 (427)
T ss_pred eEEEEEEeCCCC-cccHHHHHHHHhcCCCE-EEEcCccccccchHHHHHHHHHHhhhHhhcCc--eEEeCccccccc
Confidence 379999999632 11123333333233344 899999997554321 1 2223333333445 889999999863
No 89
>cd07410 MPP_CpdB_N Escherichia coli CpdB and related proteins, N-terminal metallophosphatase domain. CpdB is a bacterial periplasmic protein with an N-terminal metallophosphatase domain and a C-terminal 3'-nucleotidase domain. This alignment model represents the N-terminal metallophosphatase domain, which has 2',3'-cyclic phosphodiesterase activity, hydrolyzing the 2',3'-cyclic phosphates of adenosine, guanosine, cytosine and uridine to yield nucleoside and phosphate. CpdB also hydrolyzes the chromogenic substrates p-nitrophenyl phosphate (PNPP), bis(PNPP) and p-nitrophenyl phosphorylcholine (NPPC). CpdB is thought to play a scavenging role during RNA hydrolysis by converting the non-transportable nucleotides produced by RNaseI to nucleosides which can easily enter a cell for use as a carbon source. This family also includes YfkN, a Bacillus subtilis nucleotide phosphoesterase with two copies of each of the metallophosphatase and 3'-nucleotidase domains. The N-terminal metallophos
Probab=95.26 E-value=0.026 Score=54.19 Aligned_cols=66 Identities=26% Similarity=0.312 Sum_probs=39.9
Q ss_pred eEEEEeccCCCH----------------HHHHHHHHHcCCCCCCccEEeeccccCCCCCh-----------HHHHHHHHH
Q 017303 117 RVVVVGDVHGQL----------------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----------LETFLLLLA 169 (374)
Q Consensus 117 ~i~ViGDIHG~~----------------~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s-----------~evl~lL~~ 169 (374)
+|+.++|+||++ ..|..++++..-...+..++..||+++..+.+ ..++..+-.
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~gg~~~l~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~~~~~~~~~~~~~~ln~ 81 (277)
T cd07410 2 RILATSDLHGNLLPYDYYTDKPDASGGLARVATLIKKARAENPNTLLIDNGDTIQGSPLADYYAKIEDGDPHPMIAAMNA 81 (277)
T ss_pred eEEEEeccccceeCccccCCCcCCccCHHHHHHHHHHHHhcCCCeEEEeCCccCCccHHHHHhhhcccCCCChHHHHHHh
Confidence 578899999997 33566666654333333233379999876532 124444444
Q ss_pred hhhcCCCeEEEeccCccc
Q 017303 170 WKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 170 lk~~~P~~v~lLRGNHE~ 187 (374)
+. . -++..||||.
T Consensus 82 ~g---~--d~~~lGNHe~ 94 (277)
T cd07410 82 LG---Y--DAGTLGNHEF 94 (277)
T ss_pred cC---C--CEEeecccCc
Confidence 32 2 2555699996
No 90
>COG1407 Predicted ICC-like phosphoesterases [General function prediction only]
Probab=95.19 E-value=0.053 Score=51.24 Aligned_cols=76 Identities=22% Similarity=0.193 Sum_probs=45.0
Q ss_pred CeEEEEeccCCCH----------------HHHHHHHHH-cCCCCCCccEEeeccccCCCCC-----hHHHHHHHHHhhhc
Q 017303 116 SRVVVVGDVHGQL----------------HDVLFLLRD-AGFPSKNCFFVFNGDYVDRGAW-----GLETFLLLLAWKVF 173 (374)
Q Consensus 116 ~~i~ViGDIHG~~----------------~dL~~ll~~-~g~~~~~~~~vfLGDyVDRG~~-----s~evl~lL~~lk~~ 173 (374)
.+..|+.|+|=-| +.+.+.+.. ...-..+ ++|.|||+-.-.+. ..|+-.++-.++..
T Consensus 20 ~~~lVvADlHlG~e~~~~r~Gi~lP~~~~~~~~~~l~~ii~~~~p~-~lIilGD~KH~~~~~~~~e~~~~~~f~~~~~~~ 98 (235)
T COG1407 20 GRTLVVADLHLGYEESLARRGINLPRYQTDRILKRLDRIIERYGPK-RLIILGDLKHEFGKSLRQEKEEVREFLELLDER 98 (235)
T ss_pred CcEEEEEecccchhHHHHhcCcccCchhHHHHHHHHHHHHHhcCCC-EEEEcCccccccCccccccHHHHHHHHHHhccC
Confidence 5899999999333 223333331 1111223 49999999854333 34555555444432
Q ss_pred CCCeEEEeccCccccceecccC
Q 017303 174 LPHRVYLLRGNHESKYCTSVYG 195 (374)
Q Consensus 174 ~P~~v~lLRGNHE~~~~~~~~g 195 (374)
.++++|||||...-.-..+
T Consensus 99 ---evi~i~GNHD~~i~~~~~~ 117 (235)
T COG1407 99 ---EVIIIRGNHDNGIEEILPG 117 (235)
T ss_pred ---cEEEEeccCCCcccccccc
Confidence 5999999999865444443
No 91
>cd07412 MPP_YhcR_N Bacillus subtilis YhcR endonuclease and related proteins, N-terminal metallophosphatase domain. YhcR is a Bacillus subtilis sugar-nonspecific endonuclease. It cleaves endonucleolytically to yield nucleotide 3'-monophosphate products, similar to Staphylococcus aureus micrococcal nuclease. YhcR appears to be located in the cell wall, and is thought to be a substrate for a Bacillus subtilis sortase. YhcR is the major calcium-activated nuclease of B. subtilis. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated wi
Probab=94.54 E-value=0.05 Score=52.85 Aligned_cols=66 Identities=29% Similarity=0.398 Sum_probs=43.7
Q ss_pred eEEEEeccCCCHHH--------------HHHHHHHcCCCCCCccEEeeccccCCCCC-h-----HHHHHHHHHhhhcCCC
Q 017303 117 RVVVVGDVHGQLHD--------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAW-G-----LETFLLLLAWKVFLPH 176 (374)
Q Consensus 117 ~i~ViGDIHG~~~d--------------L~~ll~~~g~~~~~~~~vfLGDyVDRG~~-s-----~evl~lL~~lk~~~P~ 176 (374)
+++.+.|+||++.. |..+++.......+..++..||++...+. + ..++..+-++..
T Consensus 2 ~il~tnD~Hg~~~~~~~~~~~~~gG~arl~~~i~~~r~~~~~~l~ld~GD~~~gs~~~s~~~~g~~~~~~~n~~g~---- 77 (288)
T cd07412 2 QILAINDFHGRLEPPGKVVTVPAGGAAYLAAYLDEARAQNPNSLFVSAGDLIGASPFESALLQDEPTIEALNAMGV---- 77 (288)
T ss_pred eEEEEeccccCccCCCCccccccccHHHHHHHHHHHHhcCCCeEEEeCCcccccccchhhcccCCcHHHHHHhhCC----
Confidence 57889999998653 66667766544444458889999987664 2 234555555432
Q ss_pred eEEEeccCccc
Q 017303 177 RVYLLRGNHES 187 (374)
Q Consensus 177 ~v~lLRGNHE~ 187 (374)
. .+..||||.
T Consensus 78 D-a~t~GNHef 87 (288)
T cd07412 78 D-ASAVGNHEF 87 (288)
T ss_pred e-eeeeccccc
Confidence 2 355699996
No 92
>PF14582 Metallophos_3: Metallophosphoesterase, calcineurin superfamily; PDB: 1UF3_B 2YVT_A.
Probab=94.45 E-value=0.053 Score=51.04 Aligned_cols=72 Identities=17% Similarity=0.183 Sum_probs=42.5
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHH-------------------------HHHHHh
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETF-------------------------LLLLAW 170 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl-------------------------~lL~~l 170 (374)
.++..++|.||.++.|.++.+.+.-...+. ++|+||++-....+-|-. .-.+..
T Consensus 6 ~kilA~s~~~g~~e~l~~l~~~~~e~~~D~-~v~~G~~~~~~a~~~e~~~a~~~~r~p~k~~i~~e~~~~~e~~~~ff~~ 84 (255)
T PF14582_consen 6 RKILAISNFRGDFELLERLVEVIPEKGPDA-VVFVGDLLKAEARSDEYERAQEEQREPDKSEINEEECYDSEALDKFFRI 84 (255)
T ss_dssp -EEEEEE--TT-HHHHHHHHHHHHHHT-SE-EEEES-SS-TCHHHHHHHHHHHTT----THHHHHHHHHHHHHHHHHHHH
T ss_pred hhheeecCcchHHHHHHHHHhhccccCCCE-EEEeccccccchhhhHHHHHhhhccCcchhhhhhhhhhhHHHHHHHHHH
Confidence 479999999999999999988765555565 999999986544443322 233322
Q ss_pred hhcCCCeEEEeccCcccc
Q 017303 171 KVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 171 k~~~P~~v~lLRGNHE~~ 188 (374)
--...--+++++||||..
T Consensus 85 L~~~~~p~~~vPG~~Dap 102 (255)
T PF14582_consen 85 LGELGVPVFVVPGNMDAP 102 (255)
T ss_dssp HHCC-SEEEEE--TTS-S
T ss_pred HHhcCCcEEEecCCCCch
Confidence 223444699999999984
No 93
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms]
Probab=94.01 E-value=0.052 Score=45.32 Aligned_cols=53 Identities=36% Similarity=0.372 Sum_probs=36.7
Q ss_pred ccCCccccCHHHHHHHHHHCCCcEEEEeccCCCCcCCCCCcccccCCeeeeccCCCCeEEEEEeCCCCC
Q 017303 241 ERGIGLLWGPDSTEEFLKKFSLKLIIRSHEGPDARQKRPDLAGMDNGYTIDHDVESGMCITLFSAPDYP 309 (374)
Q Consensus 241 ~rg~g~~fg~~~~~~fl~~~~l~~IIrGH~~~~~~~~r~~~~~v~~Gy~~~~~~~~g~liTvFSapnY~ 309 (374)
++|....+ .+.+..|...+....+.++|... .++.|+.+ .+..+|.|++++||
T Consensus 102 ~~g~~~~~-~~~~~~f~~~~~~~~~~~~~~~~----------~~d~~~~~-----~~~~lt~~~~~~~~ 154 (155)
T COG0639 102 PRGVPRDG-GDVTAVFGIVHTPKLIERAHVLY----------DIDTGAVF-----GGGLLTAFSAPNYC 154 (155)
T ss_pred CCCCCccc-cchhhHHhhhcccceEEEEeEEE----------ecCceEEe-----CCCeeeEEeccccc
Confidence 34444444 46777888777777799999962 24555443 22999999999997
No 94
>cd07378 MPP_ACP5 Homo sapiens acid phosphatase 5 and related proteins, metallophosphatase domain. Acid phosphatase 5 (ACP5) removes the mannose 6-phosphate recognition marker from lysosomal proteins. The exact site of dephosphorylation is not clear. Evidence suggests dephosphorylation may take place in a prelysosomal compartment as well as in the lysosome. ACP5 belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site ma
Probab=93.86 E-value=0.15 Score=48.63 Aligned_cols=69 Identities=25% Similarity=0.266 Sum_probs=38.7
Q ss_pred eEEEEeccCCC--H--HHHHHHHH-HcCCCCCCccEEeecccc-CCCCChH------HHHHHHHH-hhhcCCCeEEEecc
Q 017303 117 RVVVVGDVHGQ--L--HDVLFLLR-DAGFPSKNCFFVFNGDYV-DRGAWGL------ETFLLLLA-WKVFLPHRVYLLRG 183 (374)
Q Consensus 117 ~i~ViGDIHG~--~--~dL~~ll~-~~g~~~~~~~~vfLGDyV-DRG~~s~------evl~lL~~-lk~~~P~~v~lLRG 183 (374)
+++++||.=.. . .++...+. .+.....+- +|++||+| +-|..+. +.+..++. +... --++.+.|
T Consensus 2 ~f~~~gD~g~~~~~~~~~~~~~~~~~~~~~~~df-vv~~GD~~y~~g~~~~~~~~~~~~~~~~~~~~~~~--~P~~~v~G 78 (277)
T cd07378 2 RFLALGDWGGGGTAGQKAVAKAMAKVAAELGPDF-ILSLGDNFYDDGVGSVDDPRFETTFEDVYSAPSLQ--VPWYLVLG 78 (277)
T ss_pred eEEEEeecCCCCCHHHHHHHHHHHHHHHhcCCCE-EEeCCCccccCCCCCCcchHHHHHHHHHccchhhc--CCeEEecC
Confidence 67899997553 1 33443333 333233344 89999997 5553221 22332322 2122 34999999
Q ss_pred Ccccc
Q 017303 184 NHESK 188 (374)
Q Consensus 184 NHE~~ 188 (374)
|||..
T Consensus 79 NHD~~ 83 (277)
T cd07378 79 NHDYS 83 (277)
T ss_pred CcccC
Confidence 99986
No 95
>KOG3325 consensus Membrane coat complex Retromer, subunit VPS29/PEP11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.83 E-value=0.66 Score=40.95 Aligned_cols=62 Identities=23% Similarity=0.382 Sum_probs=49.1
Q ss_pred eEEEEeccC--CCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccc
Q 017303 117 RVVVVGDVH--GQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 117 ~i~ViGDIH--G~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~ 187 (374)
-+.++||+| -...+|-.-|++.=.|..-++++++|++. |.|++.+|..+. ..++++||-.+.
T Consensus 2 LvL~lgD~HiP~Ra~~Lp~KFkklLvPgki~hilctGNlc-----s~e~~dylk~l~----~dvhiVrGeFD~ 65 (183)
T KOG3325|consen 2 LVLVLGDLHIPHRANDLPAKFKKLLVPGKIQHILCTGNLC-----SKESYDYLKTLS----SDVHIVRGEFDE 65 (183)
T ss_pred EEEEeccccCCccccccCHHHHhccCCCceeEEEEeCCcc-----hHHHHHHHHhhC----CCcEEEecccCc
Confidence 478999999 34567777777776787777899999975 779999987764 689999998765
No 96
>cd07408 MPP_SA0022_N Staphylococcus aureus SA0022 and related proteins, N-terminal metallophosphatase domain. SA0022 is an uncharacterized Staphylococcus aureus UshA-like protein with two putative domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. SA0022 also contains a putative C-terminal cell wall anchor domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet
Probab=93.83 E-value=0.11 Score=49.31 Aligned_cols=65 Identities=18% Similarity=0.231 Sum_probs=40.9
Q ss_pred eEEEEeccCCCH----------HHHHHHHHHcCCCCCCccEEeeccccCCCCCh-----HHHHHHHHHhhhcCCCeEEEe
Q 017303 117 RVVVVGDVHGQL----------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHRVYLL 181 (374)
Q Consensus 117 ~i~ViGDIHG~~----------~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~~v~lL 181 (374)
+++-++|+||++ ..+..++++..-. .+..++..||+++..+.+ ..++..+-.+. -.+ +.
T Consensus 2 ~il~~~D~H~~~~~~~~~~~g~~~l~~~i~~~~~~-~~~l~l~~GD~~~gs~~~~~~~g~~~~~~ln~~g----~d~-~~ 75 (257)
T cd07408 2 TILHTNDIHGRIDEDDNNGIGYAKLATYKKEMNKL-DNDLLVDAGDAIQGLPISDLDKGETIIKIMNAVG----YDA-VT 75 (257)
T ss_pred EEEEeccCcccccCCCCccccHHHHHHHHHHHHhc-CCEEEEeCCCcCCCchhhhhcCCcHHHHHHHhcC----CcE-Ec
Confidence 578899999985 4456666665433 344588899999876643 23333333331 133 45
Q ss_pred ccCccc
Q 017303 182 RGNHES 187 (374)
Q Consensus 182 RGNHE~ 187 (374)
.||||.
T Consensus 76 ~GNHef 81 (257)
T cd07408 76 PGNHEF 81 (257)
T ss_pred cccccc
Confidence 699996
No 97
>cd07411 MPP_SoxB_N Thermus thermophilus SoxB and related proteins, N-terminal metallophosphatase domain. SoxB (sulfur oxidation protein B) is a periplasmic thiosulfohydrolase and an essential component of the sulfur oxidation pathway in archaea and bacteria. SoxB has a dinuclear manganese cluster and is thought to catalyze the release of sulfate from a protein-bound cysteine S-thiosulfonate. SoxB is expressed from the sox (sulfur oxidation) gene cluster, which encodes 15 other sox genes, and has two domains, an N-terminal metallophosphatase domain and a C-terminal 5'-nucleotidase domain. SoxB binds the SoxYZ complex and is thought to function as a sulfate-thiohydrolase. SoxB is closely related to the UshA, YchR, and CpdB proteins, all of which have the same two-domain architecture. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzy
Probab=93.75 E-value=0.12 Score=49.26 Aligned_cols=66 Identities=21% Similarity=0.240 Sum_probs=38.5
Q ss_pred eEEEEeccCCCHH----------------------HHHHHHHHcCCC-CCCccEEeeccccCCCCChH-----HHHHHHH
Q 017303 117 RVVVVGDVHGQLH----------------------DVLFLLRDAGFP-SKNCFFVFNGDYVDRGAWGL-----ETFLLLL 168 (374)
Q Consensus 117 ~i~ViGDIHG~~~----------------------dL~~ll~~~g~~-~~~~~~vfLGDyVDRG~~s~-----evl~lL~ 168 (374)
.++-++|+||++. .+..++++.... ..+..++..||+++..+.+. .++..+-
T Consensus 2 ~il~t~D~Hg~~~~~~~~~~~~~~~~~~~~~gG~~r~~~~v~~~~~~~~~~~l~l~~GD~~~gs~~~~~~~g~~~~~~l~ 81 (264)
T cd07411 2 TLLHINDLHGQLIPHYELEPSNLLARVFGMAGGFAHIATLIKRIRAERNPNTLLLDGGDTWQGSGEALYTRGQAMVDALN 81 (264)
T ss_pred EEEEEcccccCccccccccccccccccccccCcHHHHHHHHHHHHHhcCCCeEEEeCCCccCCChHHhhcCChhHHHHHH
Confidence 4677889998753 344555554332 33443456999998776442 3444444
Q ss_pred HhhhcCCCeEEEeccCcccc
Q 017303 169 AWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 169 ~lk~~~P~~v~lLRGNHE~~ 188 (374)
++ + --.+. ||||..
T Consensus 82 ~~----g-~da~~-GNHefd 95 (264)
T cd07411 82 AL----G-VDAMV-GHWEFT 95 (264)
T ss_pred hh----C-CeEEe-cccccc
Confidence 43 2 23344 999963
No 98
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=92.59 E-value=0.25 Score=47.65 Aligned_cols=68 Identities=22% Similarity=0.250 Sum_probs=50.3
Q ss_pred CeEEEEeccCCC--HHHHHHHHHHcCCCCCCccEEeeccccCCC-CChHHHHHHHHHhhhcCCCeEEEeccCcccc
Q 017303 116 SRVVVVGDVHGQ--LHDVLFLLRDAGFPSKNCFFVFNGDYVDRG-AWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 116 ~~i~ViGDIHG~--~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG-~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 188 (374)
|++.++|||=|. ...|...|..+......+.+|.+||...-| .-+-++...|..+-+ .++.+ |||+.-
T Consensus 1 m~ilfiGDi~G~~Gr~~l~~~L~~lk~~~~~D~vIaNgEn~~gG~Gi~~~~~~~L~~~Gv----DviT~-GNH~~D 71 (266)
T TIGR00282 1 IKFLFIGDVYGKAGRKIVKNNLPQLKSKYQADLVIANGENTTHGKGLTLKIYEFLKQSGV----NYITM-GNHTWF 71 (266)
T ss_pred CeEEEEEecCCHHHHHHHHHHHHHHHHhCCCCEEEEcCcccCCCCCCCHHHHHHHHhcCC----CEEEc-cchhcc
Confidence 589999999999 577777777665443334477799999766 457888888887643 45555 999884
No 99
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=91.91 E-value=0.34 Score=45.82 Aligned_cols=66 Identities=27% Similarity=0.363 Sum_probs=38.5
Q ss_pred EEeccC-C----CH-HHHHHHHHHcCCCCCCccEEeeccccC----CCCCh---HHHHHHHHHhhhcCCCeEEEeccCcc
Q 017303 120 VVGDVH-G----QL-HDVLFLLRDAGFPSKNCFFVFNGDYVD----RGAWG---LETFLLLLAWKVFLPHRVYLLRGNHE 186 (374)
Q Consensus 120 ViGDIH-G----~~-~dL~~ll~~~g~~~~~~~~vfLGDyVD----RG~~s---~evl~lL~~lk~~~P~~v~lLRGNHE 186 (374)
.|+|+| | +. +.|++.|+... +..+. +.++||++| |...+ -+|...|..+ .....++|.+.|||+
T Consensus 2 FISDlHL~~~~p~~t~~fl~Fl~~~a-~~ad~-lyilGDifd~w~g~~~~~~~~~~V~~~l~~~-a~~G~~v~~i~GN~D 78 (237)
T COG2908 2 FISDLHLGPKRPALTAFFLDFLREEA-AQADA-LYILGDIFDGWIGDDEPPQLHRQVAQKLLRL-ARKGTRVYYIHGNHD 78 (237)
T ss_pred eeeccccCCCCcHHHHHHHHHHHhcc-ccCcE-EEEechhhhhhhcCCcccHHHHHHHHHHHHH-HhcCCeEEEecCchH
Confidence 689999 3 22 33344444432 23344 888999996 22222 3444444443 233468999999999
Q ss_pred cc
Q 017303 187 SK 188 (374)
Q Consensus 187 ~~ 188 (374)
..
T Consensus 79 fl 80 (237)
T COG2908 79 FL 80 (237)
T ss_pred HH
Confidence 53
No 100
>cd07409 MPP_CD73_N CD73 ecto-5'-nucleotidase and related proteins, N-terminal metallophosphatase domain. CD73 is a mammalian ecto-5'-nucleotidase expressed in endothelial cells and lymphocytes that catalyzes the conversion of 5'-AMP to adenosine in the final step of a pathway that generates adenosine from ATP. This pathway also includes a CD39 nucleoside triphosphate dephosphorylase that mediates the dephosphorylation of ATP to ADP and then to 5'-AMP. These enzymes all have an N-terminal metallophosphatase domain and a C-terminal 5'nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active si
Probab=90.83 E-value=0.52 Score=45.55 Aligned_cols=67 Identities=19% Similarity=0.269 Sum_probs=39.6
Q ss_pred eEEEEeccCCCH---------------------HHHHHHHHHcCCCCCCccEEeeccccCCCCCh-----HHHHHHHHHh
Q 017303 117 RVVVVGDVHGQL---------------------HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAW 170 (374)
Q Consensus 117 ~i~ViGDIHG~~---------------------~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~l 170 (374)
+++-++|+||++ ..+..+++...-...+..++..||+++..+.+ ..++..+-.+
T Consensus 2 ~il~tnD~Hg~l~~~~~~~~~~~~~~~~~~gG~ar~~~~v~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~~ 81 (281)
T cd07409 2 TILHTNDHHSRFEETNPSGGVKDAATEKCYGGFARVATLVKELRAENPNVLFLNAGDAFQGTLWYTLYKGNADAEFMNLL 81 (281)
T ss_pred EEEEeccccccccccCccccccccccccccCCHHHHHHHHHHHHhcCCCEEEEeCCCCCCCcchhhhcCChHHHHHHHhc
Confidence 577889999875 44555666554333344456689999876543 3333443333
Q ss_pred hhcCCCeEEEeccCcccc
Q 017303 171 KVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 171 k~~~P~~v~lLRGNHE~~ 188 (374)
. . .+ +..||||.-
T Consensus 82 g---~-D~-~~lGNHefd 94 (281)
T cd07409 82 G---Y-DA-MTLGNHEFD 94 (281)
T ss_pred C---C-CE-EEecccccc
Confidence 2 1 23 445999973
No 101
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=89.66 E-value=0.5 Score=54.62 Aligned_cols=67 Identities=18% Similarity=0.204 Sum_probs=42.2
Q ss_pred CeEEEEeccCCCH---HHHHHHHHHcCCCCCCccEEeeccccCCCCChH-----HHHHHHHHhhhcCCCeEEEeccCccc
Q 017303 116 SRVVVVGDVHGQL---HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-----ETFLLLLAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 116 ~~i~ViGDIHG~~---~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~-----evl~lL~~lk~~~P~~v~lLRGNHE~ 187 (374)
-.++.++|+||++ ..+..++++..-...+..++..||++++.+.+. .++.++-++ .--++..||||.
T Consensus 661 l~Il~~nD~Hg~l~g~~r~~~~i~~~r~~~~~~l~ld~GD~~~gs~~~~~~~g~~~~~~ln~l-----g~d~~~~GNHEf 735 (1163)
T PRK09419 661 LTILHTNDFHGHLDGAAKRVTKIKEVKEENPNTILVDAGDVYQGSLYSNLLKGLPVLKMMKEM-----GYDASTFGNHEF 735 (1163)
T ss_pred EEEEEEeecccCCCCHHHHHHHHHHHHhhCCCeEEEecCCCCCCcchhhhcCChHHHHHHhCc-----CCCEEEeccccc
Confidence 4788999999885 444555555443233332344899999876542 344544443 223568999997
No 102
>cd07406 MPP_CG11883_N Drosophila melanogaster CG11883 and related proteins, N-terminal metallophosphatase domain. CG11883 is an uncharacterized Drosophila melanogaster UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at th
Probab=89.17 E-value=0.76 Score=43.75 Aligned_cols=57 Identities=21% Similarity=0.188 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHcCCCCCCccEEeeccccCCCCCh-----HHHHHHHHHhhhcCCCeEEEeccCccc
Q 017303 126 GQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 126 G~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~~v~lLRGNHE~ 187 (374)
|-+.-+..++++..-...+..++..||+++.++.+ ..++..+-.+. --+...||||.
T Consensus 21 gG~~rl~~~i~~~r~~~~~~l~l~~GD~~~g~~~~~~~~g~~~~~~l~~l~-----~d~~~~GNHef 82 (257)
T cd07406 21 GGAARFATLRKQLRKENPNTLVLFSGDVLSPSLLSTATKGKQMVPVLNALG-----VDLACFGNHEF 82 (257)
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEECCCccCCccchhhcCCccHHHHHHhcC-----CcEEeeccccc
Confidence 45677777787765444444588899999877532 34555555542 23567899996
No 103
>COG1768 Predicted phosphohydrolase [General function prediction only]
Probab=88.01 E-value=1 Score=41.16 Aligned_cols=42 Identities=24% Similarity=0.359 Sum_probs=31.2
Q ss_pred CccEEeecccc--CCCCChHHHHHHHHHhhhcCCCeEEEeccCccccc
Q 017303 144 NCFFVFNGDYV--DRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 144 ~~~~vfLGDyV--DRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
++.++.-||+- -|=++..+-+.+|-+| |..=+++||||+...
T Consensus 44 eDiVllpGDiSWaM~l~ea~~Dl~~i~~L----PG~K~m~rGNHDYWw 87 (230)
T COG1768 44 EDIVLLPGDISWAMRLEEAEEDLRFIGDL----PGTKYMIRGNHDYWW 87 (230)
T ss_pred hhEEEecccchhheechhhhhhhhhhhcC----CCcEEEEecCCcccc
Confidence 34477789985 4556667777777765 788999999999853
No 104
>cd00842 MPP_ASMase acid sphingomyelinase and related proteins, metallophosphatase domain. Acid sphingomyelinase (ASMase) is a ubiquitously expressed phosphodiesterase which hydrolyzes sphingomyelin in acid pH conditions to form ceramide, a bioactive second messenger, as part of the sphingomyelin signaling pathway. ASMase is localized at the noncytosolic leaflet of biomembranes (for example the luminal leaflet of endosomes, lysosomes and phagosomes, and the extracellular leaflet of plasma membranes). ASMase-deficient humans develop Niemann-Pick disease. This disease is characterized by lysosomal storage of sphingomyelin in all tissues. Although ASMase-deficient mice are resistant to stress-induced apoptosis, they have greater susceptibility to bacterial infection. The latter correlates with defective phagolysosomal fusion and antibacterial killing activity in ASMase-deficient macrophages. ASMase belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but
Probab=85.97 E-value=1.3 Score=42.73 Aligned_cols=71 Identities=25% Similarity=0.187 Sum_probs=40.4
Q ss_pred EEEeccCCC---HHHHHHHHHHcCC--CCCCccEEeeccccCCCCChH--H------HHHHHHHhhhcCCC-eEEEeccC
Q 017303 119 VVVGDVHGQ---LHDVLFLLRDAGF--PSKNCFFVFNGDYVDRGAWGL--E------TFLLLLAWKVFLPH-RVYLLRGN 184 (374)
Q Consensus 119 ~ViGDIHG~---~~dL~~ll~~~g~--~~~~~~~vfLGDyVDRG~~s~--e------vl~lL~~lk~~~P~-~v~lLRGN 184 (374)
.-.|+-. | ...+..+|+.+.. +..+- +|+.||+++.+.... + .-.+...++..+|. .|+.+.||
T Consensus 41 ~~~G~~~-CD~p~~l~~s~l~~i~~~~~~~df-ii~tGD~v~h~~~~~~~~~~~~~~~~~~~~~l~~~~~~~pv~~~~GN 118 (296)
T cd00842 41 GPWGDYG-CDSPWRLVESALEAIKKNHPKPDF-ILWTGDLVRHDVDEQTPETLVLISISNLTSLLKKAFPDTPVYPALGN 118 (296)
T ss_pred CCCcCcC-CCCcHHHHHHHHHHHHHhCCCCCE-EEEcCCCCCCCchhhchhHHHHHHHHHHHHHHHHhCCCCCEEEcCCC
Confidence 3445543 3 3445555554432 23444 899999998876531 1 12222334444443 59999999
Q ss_pred cccccee
Q 017303 185 HESKYCT 191 (374)
Q Consensus 185 HE~~~~~ 191 (374)
||....+
T Consensus 119 HD~~p~~ 125 (296)
T cd00842 119 HDSYPVN 125 (296)
T ss_pred CCCCccc
Confidence 9987543
No 105
>cd07407 MPP_YHR202W_N Saccharomyces cerevisiae YHR202W and related proteins, N-terminal metallophosphatase domain. YHR202W is an uncharacterized Saccharomyces cerevisiae UshA-like protein with two domains, an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at
Probab=85.87 E-value=1 Score=43.80 Aligned_cols=67 Identities=22% Similarity=0.195 Sum_probs=38.6
Q ss_pred eEEEEeccCCCHHH-------------HHHH---HH-HcCCCCCCccEEeeccccCCCCChH-------HHHHHHHHhhh
Q 017303 117 RVVVVGDVHGQLHD-------------VLFL---LR-DAGFPSKNCFFVFNGDYVDRGAWGL-------ETFLLLLAWKV 172 (374)
Q Consensus 117 ~i~ViGDIHG~~~d-------------L~~l---l~-~~g~~~~~~~~vfLGDyVDRG~~s~-------evl~lL~~lk~ 172 (374)
.|+-+.|+||++.. +.++ ++ ..+....+..++..||++..-+.+. -++.++-.+
T Consensus 7 tILhtnD~Hg~l~~~~~~~~~~~~~gg~a~~i~~~~~~~~~~~~~~Llld~GD~~qGs~~~~~~~~~g~~~~~~mN~m-- 84 (282)
T cd07407 7 NFLHTTDTHGWLGGHLNDPNYSADWGDFASFVEHMREKADQKGVDLLLVDTGDLHDGNGLSDASPPPGSYSNPIFRMM-- 84 (282)
T ss_pred EEEEEcccccCCcCcCCcccccCCHHHHHHHHHHHHHHHHhcCCCEEEEeCCCccCCeeceeeecCCChHHHHHHHhc--
Confidence 67889999998631 2222 22 2222222334667999997654432 123334333
Q ss_pred cCCCeEEEeccCcccc
Q 017303 173 FLPHRVYLLRGNHESK 188 (374)
Q Consensus 173 ~~P~~v~lLRGNHE~~ 188 (374)
.-=.+..||||.-
T Consensus 85 ---gyDa~tlGNHEFd 97 (282)
T cd07407 85 ---PYDLLTIGNHELY 97 (282)
T ss_pred ---CCcEEeecccccC
Confidence 3456889999994
No 106
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=85.61 E-value=0.47 Score=50.54 Aligned_cols=42 Identities=26% Similarity=0.386 Sum_probs=36.3
Q ss_pred EEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecc
Q 017303 147 FVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSV 193 (374)
Q Consensus 147 ~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~ 193 (374)
+-.+||+.||||.+--+++.|+.. .+|=+--||||--.|...
T Consensus 188 LHIvGDIyDRGp~pd~ImD~Lm~~-----hsvDIQWGNHDIlWMGAa 229 (640)
T PF06874_consen 188 LHIVGDIYDRGPRPDKIMDRLMNY-----HSVDIQWGNHDILWMGAA 229 (640)
T ss_pred eeecccccCCCCChhHHHHHHhcC-----CCccccccchHHHHHHHh
Confidence 677999999999999999999975 578899999998766543
No 107
>cd07382 MPP_DR1281 Deinococcus radiodurans DR1281 and related proteins, metallophosphatase domain. DR1281 is an uncharacterized Deinococcus radiodurans protein with a domain that belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination.
Probab=84.73 E-value=2.3 Score=40.84 Aligned_cols=67 Identities=25% Similarity=0.283 Sum_probs=45.5
Q ss_pred eEEEEeccCCCH--HHHHHHHHHcCCCCCCccEEeeccccCCC-CChHHHHHHHHHhhhcCCCeEEEeccCcccc
Q 017303 117 RVVVVGDVHGQL--HDVLFLLRDAGFPSKNCFFVFNGDYVDRG-AWGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 117 ~i~ViGDIHG~~--~dL~~ll~~~g~~~~~~~~vfLGDyVDRG-~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 188 (374)
++.+||||=|.- ..+...|.........+.+|-+||..--| .-+-++...|..+.. .+..+ ||||.-
T Consensus 1 ~ilfigdi~g~~G~~~~~~~l~~lk~~~~~D~vi~NgEn~~gg~gl~~~~~~~L~~~G~----D~iTl-GNH~fD 70 (255)
T cd07382 1 KILFIGDIVGKPGRKAVKEHLPKLKKEYKIDFVIANGENAAGGKGITPKIAKELLSAGV----DVITM-GNHTWD 70 (255)
T ss_pred CEEEEEeCCCHHHHHHHHHHHHHHHHHCCCCEEEECCccccCCCCCCHHHHHHHHhcCC----CEEEe-cccccC
Confidence 478999999986 45566665554332233467789999766 367888888887653 34444 999863
No 108
>cd07405 MPP_UshA_N Escherichia coli UshA and related proteins, N-terminal metallophosphatase domain. UshA is a bacterial periplasmic enzyme with UDP-sugar hydrolase and dinucleoside-polyphosphate hydrolase activities associated with its N-terminal metallophosphatase domain, and 5'-nucleotidase activity associated with its C-terminal domain. UshA has been studied in Escherichia coli where it is expressed from the ushA gene as an immature precursor and proteolytically cleaved to form a mature product upon export to the periplasm. UshA hydrolyzes many different nucleotides and nucleotide derivitives and has been shown to degrade external UDP-glucose to uridine, glucose 1-phosphate and phosphate for utilization by the cell. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly related metallophosphatases (MPPs) that includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs
Probab=83.67 E-value=1.4 Score=42.78 Aligned_cols=67 Identities=16% Similarity=0.127 Sum_probs=37.2
Q ss_pred eEEEEeccCCCHHH----------HHHHHHHcCCC----CCCccEEeeccccCCCCCh-----HHHHHHHHHhhhcCCCe
Q 017303 117 RVVVVGDVHGQLHD----------VLFLLRDAGFP----SKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHR 177 (374)
Q Consensus 117 ~i~ViGDIHG~~~d----------L~~ll~~~g~~----~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~~ 177 (374)
.|+-+.|+||++.. +..++++.... ..+..++-.||++...+.+ .-++.++-++.. .
T Consensus 2 tIl~tnD~Hg~l~~~~~~~gG~ar~a~~i~~~r~~~~~~~~~~l~ld~GD~~~Gs~~~~~~~g~~~~~~~n~~g~----D 77 (285)
T cd07405 2 TILHTNDHHGHFWPNGTGEYGLAAQKTLVDGVRREVAAQGGYVLLLSGGDINTGVPESDLQDAEPDFRGMNLVGY----D 77 (285)
T ss_pred EEEEEcccccccccCCCCCccHHHHHHHHHHHHHHhhccCCCEEEEeCCCcCCCchhHHhcCcchHHHHHHhhCC----c
Confidence 57789999998633 44455443321 2234477799998433322 223344444322 2
Q ss_pred EEEeccCcccc
Q 017303 178 VYLLRGNHESK 188 (374)
Q Consensus 178 v~lLRGNHE~~ 188 (374)
+ +..||||.-
T Consensus 78 a-~~~GNHEfD 87 (285)
T cd07405 78 A-MAVGNHEFD 87 (285)
T ss_pred E-Eeecccccc
Confidence 3 344999963
No 109
>cd08162 MPP_PhoA_N Synechococcus sp. strain PCC 7942 PhoA and related proteins, N-terminal metallophosphatase domain. Synechococcus sp. strain PCC 7942 PhoA is a large atypical alkaline phosphatase. It is known to be transported across the inner cytoplasmic membrane and into the periplasmic space. In vivo inactivation of the gene encoding PhoA leads to a loss of extracellular, phosphate-regulated phosphatase activity, but does not appear to affect the cells capacity for phosphate uptake. PhoA may play a role in scavenging phosphate during growth of Synechococcus sp. strain PCC 7942 in its natural environment. PhoA belongs to a domain family which includes the bacterial enzyme UshA and several other related enzymes including SoxB, CpdB, YhcR, and CD73. All members have a similar domain architecture which includes an N-terminal metallophosphatase domain and a C-terminal nucleotidase domain. The N-terminal metallophosphatase domain belongs to a large superfamily of distantly relat
Probab=82.73 E-value=2.1 Score=42.16 Aligned_cols=66 Identities=23% Similarity=0.231 Sum_probs=40.2
Q ss_pred eEEEEeccCCCHH------HHHHHHHHcCCC----CCCccEEeeccccCCCCC-------------hHHHHHHHHHhhhc
Q 017303 117 RVVVVGDVHGQLH------DVLFLLRDAGFP----SKNCFFVFNGDYVDRGAW-------------GLETFLLLLAWKVF 173 (374)
Q Consensus 117 ~i~ViGDIHG~~~------dL~~ll~~~g~~----~~~~~~vfLGDyVDRG~~-------------s~evl~lL~~lk~~ 173 (374)
.++-+.|+||++. .+..+++...-. ..+..++..||.+..++. ..-++.++-++.
T Consensus 2 ~IlhtnD~Hg~~~~~gg~ar~a~~i~~~r~~~~~~~~~~l~ldaGD~~qGs~~~~~~~~~~~~~~~G~~~i~~mN~~g-- 79 (313)
T cd08162 2 QLLHTSDGESGLLAEDDAPNFSALVNALKDEAAAEYDNTLTLSSGDNFIPGPFFNASLDPLIYGDPGRADILILNALG-- 79 (313)
T ss_pred eEEEecccccCccccCCHHHHHHHHHHHHHhhhccCCCeEEEecCccccCchhhhhhccccccccCChHHHHHHhccC--
Confidence 4667889999953 444445543221 233457889999876543 233445554543
Q ss_pred CCCeEEEeccCccc
Q 017303 174 LPHRVYLLRGNHES 187 (374)
Q Consensus 174 ~P~~v~lLRGNHE~ 187 (374)
-=.+..||||.
T Consensus 80 ---~Da~tlGNHEF 90 (313)
T cd08162 80 ---VQAIALGNHEF 90 (313)
T ss_pred ---CcEEecccccc
Confidence 34677999996
No 110
>PRK09420 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein; Reviewed
Probab=82.20 E-value=2.1 Score=46.57 Aligned_cols=66 Identities=26% Similarity=0.320 Sum_probs=43.0
Q ss_pred eEEEEeccCCCHHH----------------HHHHHHHcCCCCCCccEEeeccccCCCCChH-------------HHHHHH
Q 017303 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-------------ETFLLL 167 (374)
Q Consensus 117 ~i~ViGDIHG~~~d----------------L~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~-------------evl~lL 167 (374)
+|+-..|+||++.. +..+++++.-...+..+|-.||++...+.+- -++..+
T Consensus 27 ~IL~TnDlHg~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~llvD~GD~~qGsp~~~~~~~~~~~~g~~~p~i~am 106 (649)
T PRK09420 27 RIMETTDLHSNMMDFDYYKDKPTEKFGLVRTASLIKAARAEAKNSVLVDNGDLIQGSPLGDYMAAKGLKAGDVHPVYKAM 106 (649)
T ss_pred EEEEEcccccCccCCccccCCcccccCHHHHHHHHHHHHHhCCCEEEEECCCcCCCchhhhhhhhccccCCCcchHHHHH
Confidence 88889999999742 3445555443333445788999998666532 144444
Q ss_pred HHhhhcCCCeEEEeccCccc
Q 017303 168 LAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 168 ~~lk~~~P~~v~lLRGNHE~ 187 (374)
-.| .-=.+..||||.
T Consensus 107 N~l-----gyDa~tlGNHEF 121 (649)
T PRK09420 107 NTL-----DYDVGNLGNHEF 121 (649)
T ss_pred Hhc-----CCcEEeccchhh
Confidence 444 334678899996
No 111
>KOG2863 consensus RNA lariat debranching enzyme [RNA processing and modification]
Probab=81.12 E-value=2.4 Score=42.59 Aligned_cols=73 Identities=23% Similarity=0.417 Sum_probs=46.6
Q ss_pred CeEEEEeccCCCHHHHHH---HHHHcCCCCCCccEEeeccccC-CCCC---h---------HHHHHHHHHhhhcCCCeEE
Q 017303 116 SRVVVVGDVHGQLHDVLF---LLRDAGFPSKNCFFVFNGDYVD-RGAW---G---------LETFLLLLAWKVFLPHRVY 179 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~---ll~~~g~~~~~~~~vfLGDyVD-RG~~---s---------~evl~lL~~lk~~~P~~v~ 179 (374)
|+|.|=|=-||+++.+-. +.++.|-.+.+- ++++||+=. |-.+ + +..+.--..-....|---+
T Consensus 1 MrIaVqGCcHG~Ld~iYkti~~~ek~~~tkVDL-LlccGDFQavRn~~D~~siavPpKy~~m~~F~~YYsge~~APVlTI 79 (456)
T KOG2863|consen 1 MRIAVQGCCHGELDNIYKTISLIEKRGNTKVDL-LLCCGDFQAVRNEQDLKSIAVPPKYRRMGDFYKYYSGEIKAPVLTI 79 (456)
T ss_pred CceeeecccchhHHHHHHHHHHHHHcCCCCccE-EEEccchHhhcchhhcccccCCHHHHHHHHHHHHhCCcccCceeEE
Confidence 589999999999998874 445555445554 899999952 2111 1 1122222233344665668
Q ss_pred EeccCccccc
Q 017303 180 LLRGNHESKY 189 (374)
Q Consensus 180 lLRGNHE~~~ 189 (374)
++=||||.+.
T Consensus 80 FIGGNHEAsn 89 (456)
T KOG2863|consen 80 FIGGNHEASN 89 (456)
T ss_pred EecCchHHHH
Confidence 8999999963
No 112
>TIGR01390 CycNucDiestase 2',3'-cyclic-nucleotide 2'-phosphodiesterase. 2',3'-cyclic-nucleotide 2'-phosphodiesterase is a bifunctional enzyme localized to the periplasm of Gram-negative bacteria. 2',3'-cyclic-nucleotide 2'-phosphodiesters are intermediates formed during the hydrolysis of RNA by the ribonuclease I, which is also found to the periplasm, and other enzymes of the RNAse T2 family. Bacteria are unable to transport 2',3'-cyclic-nucleotides into the cytoplasm. 2',3'-cyclic-nucleotide 2'-phosphodiesterase contains 2 active sites which catalyze the reactions that convert the 2',3'-cyclic-nucleotide into a 3'-nucleotide, which is then converted into nucleic acid and phosphate. Both final products can be transported into the cytoplasm. Thus, it has been suggested that 2',3'-cyclic-nucleotide 2'-phosphodiesterase has a 'scavenging' function. Experimental evidence indicates that 2',3'-cyclic-nucleotide 2'-phosphodiesterase enables Yersinia enterocolitica O:8 to grow on 2'3'-cAMP as a
Probab=80.35 E-value=2.5 Score=45.69 Aligned_cols=66 Identities=27% Similarity=0.293 Sum_probs=41.6
Q ss_pred eEEEEeccCCCHH----------------HHHHHHHHcCCCCCCccEEeeccccCCCCChH-------------HHHHHH
Q 017303 117 RVVVVGDVHGQLH----------------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL-------------ETFLLL 167 (374)
Q Consensus 117 ~i~ViGDIHG~~~----------------dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~-------------evl~lL 167 (374)
+|+-..|+||++. -+..+++++.-...+..+|-.||.+...+.+- -++.++
T Consensus 4 ~Il~TnDlH~~l~~~dy~~~~~~~~~Glar~atli~~~R~e~~n~lllD~GD~~qGsp~~~~~~~~~~~~~~~~p~~~~m 83 (626)
T TIGR01390 4 RIVETTDLHTNLMDYDYYKDKPTDKFGLTRTATLIKQARAEVKNSVLVDNGDLIQGSPLGDYMAAQGLKAGQMHPVYKAM 83 (626)
T ss_pred EEEEEcCCccCccCCcccCCCCCCCcCHHHHHHHHHHHHhhCCCeEEEECCCcCCCccchhhhhhccccCCCcChHHHHH
Confidence 6788999999974 33445555443333445788999998665442 134444
Q ss_pred HHhhhcCCCeEEEeccCccc
Q 017303 168 LAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 168 ~~lk~~~P~~v~lLRGNHE~ 187 (374)
-.| .-=.+..||||.
T Consensus 84 N~l-----gyDa~tlGNHEF 98 (626)
T TIGR01390 84 NLL-----KYDVGNLGNHEF 98 (626)
T ss_pred hhc-----CccEEecccccc
Confidence 343 234578899996
No 113
>PF04042 DNA_pol_E_B: DNA polymerase alpha/epsilon subunit B; InterPro: IPR007185 DNA polymerase epsilon is essential for cell viability and chromosomal DNA replication in budding yeast. In addition, DNA polymerase epsilon may be involved in DNA repair and cell-cycle checkpoint control. The enzyme consists of at least four subunits in mammalian cells as well as in yeast. The largest subunit of DNA polymerase epsilon is responsible for polymerase activity. In mouse, the DNA polymerase epsilon subunit B is the second largest subunit of the DNA polymerase. A part of the N-terminal was found to be responsible for the interaction with SAP18. Experimental evidence suggests that this subunit may recruit histone deacetylase to the replication fork to modify the chromatin structure [].; GO: 0003677 DNA binding, 0003887 DNA-directed DNA polymerase activity, 0006260 DNA replication; PDB: 3E0J_C 3FLO_G.
Probab=79.75 E-value=3.4 Score=37.66 Aligned_cols=72 Identities=15% Similarity=0.182 Sum_probs=37.6
Q ss_pred EEEEeccCCC-----HHHHHHHHHHcC-CCCCCccEEeeccccCCCCChH------------H-HHHHHHHhhhcC--CC
Q 017303 118 VVVVGDVHGQ-----LHDVLFLLRDAG-FPSKNCFFVFNGDYVDRGAWGL------------E-TFLLLLAWKVFL--PH 176 (374)
Q Consensus 118 i~ViGDIHG~-----~~dL~~ll~~~g-~~~~~~~~vfLGDyVDRG~~s~------------e-vl~lL~~lk~~~--P~ 176 (374)
|+|++|+|=. ++.|..+|..+. -...+ .+|++|+++|.-.... + -+..+..+.... --
T Consensus 1 Iv~~Sg~~~~~~~~~~~~L~~~l~~~~~~~~p~-~lIl~G~fi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 79 (209)
T PF04042_consen 1 IVFASGPFLDSDNLSLEPLRDLLSGVEDASKPD-VLILMGPFIDSPHPYISSGSVPDSYSFEEDFLKELDSFLESILPST 79 (209)
T ss_dssp EEEEES--CTTT-HHHHHHHHHHHCCCHCTTEC-EEEEES-SCBTTSHHHHHT---HHCCHHHHHHHHCHHHHCCCHCCS
T ss_pred CEEEecCccCCCHhHHHHHHHHHHhccccCCCc-EEEEeCCCcCccccccccccccccccccHHHHHHHHHHHhhccccc
Confidence 5677777743 566777777665 33334 4999999999632221 1 111111111111 14
Q ss_pred eEEEeccCccccce
Q 017303 177 RVYLLRGNHESKYC 190 (374)
Q Consensus 177 ~v~lLRGNHE~~~~ 190 (374)
+|+++.|+||-...
T Consensus 80 ~vvlvPg~~D~~~~ 93 (209)
T PF04042_consen 80 QVVLVPGPNDPTSS 93 (209)
T ss_dssp EEEEE--TTCTT-S
T ss_pred EEEEeCCCcccccc
Confidence 89999999998554
No 114
>COG0737 UshA 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases [Nucleotide transport and metabolism]
Probab=79.74 E-value=2.5 Score=44.37 Aligned_cols=67 Identities=25% Similarity=0.331 Sum_probs=43.1
Q ss_pred eEEEEeccCCCHH---------------HHHHHHHHcCCCCCCccEEeeccccCCCCCh------HHHHHHHHHhhhcCC
Q 017303 117 RVVVVGDVHGQLH---------------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG------LETFLLLLAWKVFLP 175 (374)
Q Consensus 117 ~i~ViGDIHG~~~---------------dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s------~evl~lL~~lk~~~P 175 (374)
+++-..|+||++. .+..++++..-...+..+|=.||++++.+-+ .-.+.+|-.++
T Consensus 28 ~ilhtnD~H~~l~~~~~~~~~~~~~g~~~~~~~v~~~ra~~~~~llld~GD~~~G~~l~~~~~~g~~~~~~mN~m~---- 103 (517)
T COG0737 28 TILHTNDLHGHLEPYDYDDDGDTDGGLARIATLVKQLRAENKNVLLLDAGDLIQGSPLSDYLTKGEPTVDLLNALG---- 103 (517)
T ss_pred EEEEeccccccceeccccccCcccccHHHHHHHHHHHHhhcCCeEEEeCCcccCCccccccccCCChHHHHHhhcC----
Confidence 7888999999998 3333444443333344467799999984432 34555555553
Q ss_pred CeEEEeccCcccc
Q 017303 176 HRVYLLRGNHESK 188 (374)
Q Consensus 176 ~~v~lLRGNHE~~ 188 (374)
-=.+..||||.-
T Consensus 104 -yDa~tiGNHEFd 115 (517)
T COG0737 104 -YDAMTLGNHEFD 115 (517)
T ss_pred -CcEEeecccccc
Confidence 235778999984
No 115
>KOG1378 consensus Purple acid phosphatase [Carbohydrate transport and metabolism]
Probab=78.95 E-value=15 Score=38.01 Aligned_cols=72 Identities=17% Similarity=0.090 Sum_probs=40.3
Q ss_pred CCeEEEEeccCCCHHH--HHHHHHHcCCCCCCccEEeecccc--CCCC--ChHHHHHHHHHhhhcCCCeEEEeccCcccc
Q 017303 115 DSRVVVVGDVHGQLHD--VLFLLRDAGFPSKNCFFVFNGDYV--DRGA--WGLETFLLLLAWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 115 ~~~i~ViGDIHG~~~d--L~~ll~~~g~~~~~~~~vfLGDyV--DRG~--~s~evl~lL~~lk~~~P~~v~lLRGNHE~~ 188 (374)
..++.|+||+==.... .+...+... ..+ -++++||+. +..+ .--+-..++-.+...-| ..+.-||||..
T Consensus 147 ~~~~~i~GDlG~~~~~~s~~~~~~~~~--k~d-~vlhiGDlsYa~~~~n~~wD~f~r~vEp~As~vP--ymv~~GNHE~d 221 (452)
T KOG1378|consen 147 PTRAAIFGDMGCTEPYTSTLRNQEENL--KPD-AVLHIGDLSYAMGYSNWQWDEFGRQVEPIASYVP--YMVCSGNHEID 221 (452)
T ss_pred ceeEEEEccccccccccchHhHHhccc--CCc-EEEEecchhhcCCCCccchHHHHhhhhhhhccCc--eEEeccccccc
Confidence 4579999998433222 233333332 223 489999988 2233 12233333333333444 67789999997
Q ss_pred cee
Q 017303 189 YCT 191 (374)
Q Consensus 189 ~~~ 191 (374)
..+
T Consensus 222 ~~~ 224 (452)
T KOG1378|consen 222 WPP 224 (452)
T ss_pred CCC
Confidence 764
No 116
>PRK09419 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=76.90 E-value=3.3 Score=47.97 Aligned_cols=66 Identities=24% Similarity=0.301 Sum_probs=39.9
Q ss_pred eEEEEeccCCCHH----------------HHHHHHHHcCCCCCCccEEeeccccCCCCCh--------------HHHHHH
Q 017303 117 RVVVVGDVHGQLH----------------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG--------------LETFLL 166 (374)
Q Consensus 117 ~i~ViGDIHG~~~----------------dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s--------------~evl~l 166 (374)
+|+-..|+||++. .+..++++..-...+..+|-.||++...+.+ .-++..
T Consensus 43 ~il~tnD~Hg~l~~~~y~~~~~~~~~Glar~at~i~~~r~~~~n~llld~GD~~qGs~l~~~~~~~~~~~~~~~~~~i~~ 122 (1163)
T PRK09419 43 QILATTDLHGNFMDYDYASDKETTGFGLAQTATLIKKARKENPNTLLVDNGDLIQGNPLGEYAVKDNILFKNKTHPMIKA 122 (1163)
T ss_pred EEEEEecccccccccccccCCCCCCcCHHHHHHHHHHHHHhCCCeEEEeCCCccCCChhhhHHhhhccccCCCcCHHHHH
Confidence 7889999999863 3344555544333344345599999866521 123333
Q ss_pred HHHhhhcCCCeEEEeccCccc
Q 017303 167 LLAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 167 L~~lk~~~P~~v~lLRGNHE~ 187 (374)
+-.+ .-=.+..||||.
T Consensus 123 mN~l-----gyDa~~lGNHEF 138 (1163)
T PRK09419 123 MNAL-----GYDAGTLGNHEF 138 (1163)
T ss_pred Hhhc-----CccEEeeccccc
Confidence 3333 334567999997
No 117
>PRK11907 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=76.50 E-value=4.1 Score=45.40 Aligned_cols=66 Identities=27% Similarity=0.292 Sum_probs=41.7
Q ss_pred eEEEEeccCCCHH----------------HHHHHHHHcCCCCCCccEEeeccccCCCCChH--------------HHHHH
Q 017303 117 RVVVVGDVHGQLH----------------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGL--------------ETFLL 166 (374)
Q Consensus 117 ~i~ViGDIHG~~~----------------dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~--------------evl~l 166 (374)
+|+-..|+||++. .+..++++..-...+..+|..||++..-+.+- -++.+
T Consensus 117 tIL~TnDiHg~l~~~dy~~~~~~~~~GlaRlAtlI~~~Rae~~NtLllD~GD~iQGSpl~~~~a~~~~~~~g~~~P~i~a 196 (814)
T PRK11907 117 RILSTTDLHTNLVNYDYYQDKPSQTLGLAKTAVLIEEAKKENPNVVLVDNGDTIQGTPLGTYKAIVDPVEEGEQHPMYAA 196 (814)
T ss_pred EEEEEEeecCCcccccccccCccccccHHHHHHHHHHHHHhCCCEEEEecCCCCCCCcccchhhhccccccCcchHHHHH
Confidence 7888999999964 23334454433333445788999997655431 14555
Q ss_pred HHHhhhcCCCeEEEeccCccc
Q 017303 167 LLAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 167 L~~lk~~~P~~v~lLRGNHE~ 187 (374)
+-.| .-=.+..||||.
T Consensus 197 mN~L-----GyDA~tLGNHEF 212 (814)
T PRK11907 197 LEAL-----GFDAGTLGNHEF 212 (814)
T ss_pred Hhcc-----CCCEEEechhhc
Confidence 5444 234678899996
No 118
>TIGR01530 nadN NAD pyrophosphatase/5'-nucleotidase NadN. This model describes NadN of Haemophilus influenzae and a small number of close homologs in pathogenic, Gram-negative bacteria. NadN is a periplasmic enzyme that cleaves NAD (nicotinamide adenine dinucleotide) to NMN (nicotinamide mononucleotide) and AMP. The NMN must be converted by a 5'-nucleotidase to nicotinamide riboside for import. NadN belongs a large family of 5'-nucleotidases and has NMN 5'-nucleotidase activity for NMN, AMP, etc.
Probab=75.92 E-value=5.3 Score=42.46 Aligned_cols=66 Identities=21% Similarity=0.212 Sum_probs=39.5
Q ss_pred eEEEEeccCCCHH---------------------HHHHHHHHcCCCCCCccEEeeccccCCCCCh-----HHHHHHHHHh
Q 017303 117 RVVVVGDVHGQLH---------------------DVLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-----LETFLLLLAW 170 (374)
Q Consensus 117 ~i~ViGDIHG~~~---------------------dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~l 170 (374)
.++-+.|+||++. .|..++++..-...+..++..||.+...+.+ ...+.++-++
T Consensus 2 tILhtND~Hg~l~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~~~n~l~ldaGD~~~gs~~~~~~~g~~~i~~~N~~ 81 (550)
T TIGR01530 2 SIIHINDHHSHLEPEELEIALAGEQLKAAIGGFAALNAEINKLRAESKNALVLHAGDAIIGTLYFTLFGGRADAALMNAA 81 (550)
T ss_pred EEEEEccccccccCcccccccCCCccccccCCHHHHHHHHHHHHhhCCCeEEEECCCCCCCccchhhcCCHHHHHHHhcc
Confidence 3566778887753 3444555544333344578899999765443 2234444444
Q ss_pred hhcCCCeEEEeccCccc
Q 017303 171 KVFLPHRVYLLRGNHES 187 (374)
Q Consensus 171 k~~~P~~v~lLRGNHE~ 187 (374)
.--.+..||||.
T Consensus 82 -----g~Da~~lGNHEF 93 (550)
T TIGR01530 82 -----GFDFFTLGNHEF 93 (550)
T ss_pred -----CCCEEEeccccc
Confidence 335788999996
No 119
>KOG2476 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.82 E-value=7.8 Score=40.12 Aligned_cols=69 Identities=17% Similarity=0.284 Sum_probs=51.6
Q ss_pred CeEEEEeccCCCHHHHHHHHHHcCCCCC-CccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCc
Q 017303 116 SRVVVVGDVHGQLHDVLFLLRDAGFPSK-NCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNH 185 (374)
Q Consensus 116 ~~i~ViGDIHG~~~dL~~ll~~~g~~~~-~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNH 185 (374)
.+|.||||.-|.+..|.+-.+.+..... =+.++++|++.+--.++.|++.+...- ...|--+|++-+|-
T Consensus 6 ~kILv~Gd~~Gr~~eli~rI~~v~Kk~GpFd~liCvGnfF~~~~~~~e~~~ykng~-~~vPiptY~~g~~~ 75 (528)
T KOG2476|consen 6 AKILVCGDVEGRFDELIKRIQKVNKKSGPFDLLICVGNFFGHDTQNAEVEKYKNGT-KKVPIPTYFLGDNA 75 (528)
T ss_pred ceEEEEcCccccHHHHHHHHHHHhhcCCCceEEEEecccCCCccchhHHHHHhcCC-ccCceeEEEecCCC
Confidence 4999999999999999777665543222 123899999998777788888877653 45676788887765
No 120
>PTZ00422 glideosome-associated protein 50; Provisional
Probab=75.11 E-value=4.9 Score=41.02 Aligned_cols=69 Identities=16% Similarity=0.201 Sum_probs=40.2
Q ss_pred eEEEEeccC-CCHHHH--HHHHHHcC-CCCCCccEEeeccccCCCCChH------HHHHHHHHhh---hcCCCeEEEecc
Q 017303 117 RVVVVGDVH-GQLHDV--LFLLRDAG-FPSKNCFFVFNGDYVDRGAWGL------ETFLLLLAWK---VFLPHRVYLLRG 183 (374)
Q Consensus 117 ~i~ViGDIH-G~~~dL--~~ll~~~g-~~~~~~~~vfLGDyVDRG~~s~------evl~lL~~lk---~~~P~~v~lLRG 183 (374)
+++++||-= |.+... .+.+...+ -.+.+- +|.+||-.+.|..|+ +.++-++.-+ +.- ..+++.|
T Consensus 28 ~F~~vGDwG~g~~~Q~~VA~~M~~~~~~~~~~F-Vls~GDNF~~Gv~sv~Dp~f~~~FE~vY~~~s~~L~~--Pwy~vLG 104 (394)
T PTZ00422 28 RFASLGNWGTGSKQQKLVASYLKQYAKNERVTF-LVSPGSNFPGGVDGLNDPKWKHCFENVYSEESGDMQI--PFFTVLG 104 (394)
T ss_pred EEEEEecCCCCchhHHHHHHHHHHHHHhCCCCE-EEECCccccCCCCCccchhHHhhHhhhccCcchhhCC--CeEEeCC
Confidence 799999943 333221 12232222 223344 889999998887764 3344444211 122 4899999
Q ss_pred Ccccc
Q 017303 184 NHESK 188 (374)
Q Consensus 184 NHE~~ 188 (374)
|||.+
T Consensus 105 NHDy~ 109 (394)
T PTZ00422 105 QADWD 109 (394)
T ss_pred ccccc
Confidence 99973
No 121
>COG3855 Fbp Uncharacterized protein conserved in bacteria [Carbohydrate transport and metabolism]
Probab=74.70 E-value=2.5 Score=43.67 Aligned_cols=44 Identities=27% Similarity=0.454 Sum_probs=36.4
Q ss_pred EEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccC
Q 017303 147 FVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYG 195 (374)
Q Consensus 147 ~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~g 195 (374)
+=.+||+-||||++-.++..|..+ ..+=+--|||+--.+....|
T Consensus 194 LHiVGDIyDRGP~pd~Imd~L~~y-----hsvDiQWGNHDilWmgA~sG 237 (648)
T COG3855 194 LHIVGDIYDRGPYPDKIMDTLINY-----HSVDIQWGNHDILWMGAASG 237 (648)
T ss_pred eeeecccccCCCCchHHHHHHhhc-----ccccccccCcceEEeecccC
Confidence 667999999999999999999876 57888899999876654433
No 122
>KOG1432 consensus Predicted DNA repair exonuclease SIA1 [General function prediction only]
Probab=71.82 E-value=11 Score=37.73 Aligned_cols=43 Identities=21% Similarity=0.152 Sum_probs=24.6
Q ss_pred cEEeeccccCCCCChHHHHHHH---HHhhhcCCCeEEEeccCccccc
Q 017303 146 FFVFNGDYVDRGAWGLETFLLL---LAWKVFLPHRVYLLRGNHESKY 189 (374)
Q Consensus 146 ~~vfLGDyVDRG~~s~evl~lL---~~lk~~~P~~v~lLRGNHE~~~ 189 (374)
.+||+||.|+. .........| .+=.+.+.--..++.||||...
T Consensus 103 lVVfTGD~i~g-~~t~Da~~sl~kAvaP~I~~~IPwA~~lGNHDdes 148 (379)
T KOG1432|consen 103 LVVFTGDNIFG-HSTQDAATSLMKAVAPAIDRKIPWAAVLGNHDDES 148 (379)
T ss_pred EEEEeCCcccc-cccHhHHHHHHHHhhhHhhcCCCeEEEeccccccc
Confidence 49999999986 3333322222 2212222223567899998853
No 123
>KOG3947 consensus Phosphoesterases [General function prediction only]
Probab=66.01 E-value=10 Score=36.88 Aligned_cols=68 Identities=26% Similarity=0.479 Sum_probs=44.6
Q ss_pred CCCCeEEEEeccCCCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCC-eEEEeccCccccc
Q 017303 113 DQDSRVVVVGDVHGQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPH-RVYLLRGNHESKY 189 (374)
Q Consensus 113 ~~~~~i~ViGDIHG~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~-~v~lLRGNHE~~~ 189 (374)
....+++.|+|.|+...+.. ..|+.+. ++-+||+-.-|. +-||..+=. +-...|. .=+.++||||..+
T Consensus 59 ~~~~r~VcisdtH~~~~~i~------~~p~gDv-lihagdfT~~g~-~~ev~~fn~-~~gslph~yKIVIaGNHELtF 127 (305)
T KOG3947|consen 59 PGYARFVCISDTHELTFDIN------DIPDGDV-LIHAGDFTNLGL-PEEVIKFNE-WLGSLPHEYKIVIAGNHELTF 127 (305)
T ss_pred CCceEEEEecCcccccCccc------cCCCCce-EEeccCCccccC-HHHHHhhhH-HhccCcceeeEEEeeccceee
Confidence 46679999999998866553 2455554 788999987654 445554422 1122332 3468999999854
No 124
>PRK09418 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase precursor protein; Reviewed
Probab=65.11 E-value=10 Score=42.18 Aligned_cols=66 Identities=24% Similarity=0.303 Sum_probs=40.5
Q ss_pred eEEEEeccCCCHHH----------------HHHHHHHcCCCCCCccEEeeccccCCCCCh-------------------H
Q 017303 117 RVVVVGDVHGQLHD----------------VLFLLRDAGFPSKNCFFVFNGDYVDRGAWG-------------------L 161 (374)
Q Consensus 117 ~i~ViGDIHG~~~d----------------L~~ll~~~g~~~~~~~~vfLGDyVDRG~~s-------------------~ 161 (374)
+|+-..|+||++.. +..++++..-...+..+|..||++-.-+.+ .
T Consensus 41 ~IL~TnDiHg~l~~~dy~~~~~~~~~Glar~AtlI~~~R~e~~ntlllD~GD~iqGspl~~~~~~~~~~~~~~~~~~~~~ 120 (780)
T PRK09418 41 RILETSDIHVNLMNYDYYQTKTDNKVGLVQTATLVNKAREEAKNSVLFDDGDALQGTPLGDYVANKINDPKKPVDPSYTH 120 (780)
T ss_pred EEEEEeecCCCCcCcCccccCCcCCCCHHHHHHHHHHHHHhCCCeEEEECCCCCCCchHHHHHhhcccccccccccccch
Confidence 78899999999632 334455543333344578899988544432 1
Q ss_pred HHHHHHHHhhhcCCCeEEEeccCccc
Q 017303 162 ETFLLLLAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 162 evl~lL~~lk~~~P~~v~lLRGNHE~ 187 (374)
-++.++-.| .-=.+..||||.
T Consensus 121 p~i~~mN~l-----gyDa~tlGNHEF 141 (780)
T PRK09418 121 PLYRLMNLM-----KYDVISLGNHEF 141 (780)
T ss_pred HHHHHHhcc-----CCCEEecccccc
Confidence 244444444 234678899995
No 125
>COG1311 HYS2 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B [DNA replication, recombination, and repair]
Probab=64.61 E-value=16 Score=38.09 Aligned_cols=77 Identities=23% Similarity=0.397 Sum_probs=42.9
Q ss_pred CCeEEEEeccC-CCHHHHHH----HHHHcCCC----CCCccEEeeccccCC-CCC-----------hHHHHHHHHHhhhc
Q 017303 115 DSRVVVVGDVH-GQLHDVLF----LLRDAGFP----SKNCFFVFNGDYVDR-GAW-----------GLETFLLLLAWKVF 173 (374)
Q Consensus 115 ~~~i~ViGDIH-G~~~dL~~----ll~~~g~~----~~~~~~vfLGDyVDR-G~~-----------s~evl~lL~~lk~~ 173 (374)
.-.+.+++|+| |...-+.. .++.++-+ +.-+.++.-||.||. |-+ ..|-...+..+--.
T Consensus 225 ~v~v~~isDih~GSk~F~~~~f~~fi~wl~g~~~~a~~vkyliiagd~VDGigiYpgq~~eL~i~di~~qy~~~A~~L~~ 304 (481)
T COG1311 225 RVYVALISDIHRGSKEFLEDEFEKFIDWLNGPGDLASRVKYLIIAGDVVDGIGIYPGQEEELVIADIYEQYEELAEFLDQ 304 (481)
T ss_pred ceEEEEEeeeecccHHHHHHHHHHHHHHhcCCcccccceEEEEEecccccccccccCcccccccccchHHHHHHHHHHhh
Confidence 34689999999 44433333 33333322 222445667899993 222 12223333333334
Q ss_pred CCC--eEEEeccCcccccee
Q 017303 174 LPH--RVYLLRGNHESKYCT 191 (374)
Q Consensus 174 ~P~--~v~lLRGNHE~~~~~ 191 (374)
-|. .|++.+|||+..-..
T Consensus 305 vp~~I~v~i~PGnhDa~r~a 324 (481)
T COG1311 305 VPEHIKVFIMPGNHDAVRQA 324 (481)
T ss_pred CCCCceEEEecCCCCccccc
Confidence 454 579999999986543
No 126
>PRK09558 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor; Reviewed
Probab=64.22 E-value=8.2 Score=40.95 Aligned_cols=66 Identities=17% Similarity=0.137 Sum_probs=36.6
Q ss_pred eEEEEeccCCCHH----------HHHHHHHHcCC----CCCCccEEeeccccCCCCCh-----HHHHHHHHHhhhcCCCe
Q 017303 117 RVVVVGDVHGQLH----------DVLFLLRDAGF----PSKNCFFVFNGDYVDRGAWG-----LETFLLLLAWKVFLPHR 177 (374)
Q Consensus 117 ~i~ViGDIHG~~~----------dL~~ll~~~g~----~~~~~~~vfLGDyVDRG~~s-----~evl~lL~~lk~~~P~~ 177 (374)
.++-+.|+||++. .+..+++...- ...+..++..||++...+.+ .-++.++-++. -.
T Consensus 36 til~tnD~Hg~~~~~~~~~~G~a~~a~~i~~~r~~~~~~~~~~l~ldaGD~~~Gs~~s~~~~g~~~i~~mN~~g----~D 111 (551)
T PRK09558 36 TILHTNDHHGHFWRNEYGEYGLAAQKTLVDQIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFRGMNLIG----YD 111 (551)
T ss_pred EEEEecccCCCccccccCCccHHHHHHHHHHHHHHhhccCCCEEEEcCCccccceEhhhhcCCchhHHHHhcCC----CC
Confidence 7888999999874 22333443321 12234577889998643332 12233343332 23
Q ss_pred EEEeccCccc
Q 017303 178 VYLLRGNHES 187 (374)
Q Consensus 178 v~lLRGNHE~ 187 (374)
+ +..||||.
T Consensus 112 a-~tlGNHEF 120 (551)
T PRK09558 112 A-MAVGNHEF 120 (551)
T ss_pred E-Eccccccc
Confidence 3 44599997
No 127
>PTZ00235 DNA polymerase epsilon subunit B; Provisional
Probab=59.43 E-value=32 Score=33.71 Aligned_cols=76 Identities=16% Similarity=0.182 Sum_probs=49.4
Q ss_pred CCCCeEEEEeccC----CCHHHHHHHHHHcC--CCCC--CccEEeeccccCCC----CCh----HHHHHHHHH-hhhcCC
Q 017303 113 DQDSRVVVVGDVH----GQLHDVLFLLRDAG--FPSK--NCFFVFNGDYVDRG----AWG----LETFLLLLA-WKVFLP 175 (374)
Q Consensus 113 ~~~~~i~ViGDIH----G~~~dL~~ll~~~g--~~~~--~~~~vfLGDyVDRG----~~s----~evl~lL~~-lk~~~P 175 (374)
+....++|+||+| -.++.|.++|.... .+.. ...+||+|+++-+. ..+ .|-+.-|.. +...||
T Consensus 25 ~~~~~~VilSDV~LD~p~tl~~L~kvf~~y~~~~~~~~~P~~fVL~GnF~S~p~~~~~~~~~~yk~~Fd~La~llls~fp 104 (291)
T PTZ00235 25 DKRHNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENELPVGFIFMGDFISLKFDYNRNFHKVYIKGFEKLSVMLISKFK 104 (291)
T ss_pred CCceEEEEEEeeccCCHHHHHHHHHHHHHhhccCcccCCCeEEEEecCccCCcccCCCCchHHHHHHHHHHHHHHHHhCh
Confidence 3456899999999 66778888887652 2211 22489999999763 222 234444443 233455
Q ss_pred -----CeEEEeccCcccc
Q 017303 176 -----HRVYLLRGNHESK 188 (374)
Q Consensus 176 -----~~v~lLRGNHE~~ 188 (374)
.++++++|-.|-.
T Consensus 105 ~L~~~s~fVFVPGpnDPw 122 (291)
T PTZ00235 105 LILEHCYLIFIPGINDPC 122 (291)
T ss_pred HHHhcCeEEEECCCCCCC
Confidence 5899999999863
No 128
>KOG2310 consensus DNA repair exonuclease MRE11 [Replication, recombination and repair]
Probab=51.71 E-value=40 Score=35.83 Aligned_cols=53 Identities=17% Similarity=0.152 Sum_probs=38.6
Q ss_pred CCCeEEEEeccC------------CCHHHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHH
Q 017303 114 QDSRVVVVGDVH------------GQLHDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLL 167 (374)
Q Consensus 114 ~~~~i~ViGDIH------------G~~~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL 167 (374)
...+|.|-.|+| -.|..|..||+.+.-...+- ++.-||+..--.-|-.+|...
T Consensus 12 ntirILVaTD~HlGY~EkD~vrg~DSf~tFeEIl~iA~e~~VDm-iLlGGDLFHeNkPSr~~L~~~ 76 (646)
T KOG2310|consen 12 NTIRILVATDNHLGYGEKDAVRGDDSFVTFEEILEIAQENDVDM-ILLGGDLFHENKPSRKTLHRC 76 (646)
T ss_pred cceEEEEeecCccccccCCcccccchHHHHHHHHHHHHhcCCcE-EEecCcccccCCccHHHHHHH
Confidence 345899999999 35778899998876655554 778899998776665555443
No 129
>KOG2679 consensus Purple (tartrate-resistant) acid phosphatase [Posttranslational modification, protein turnover, chaperones]
Probab=51.66 E-value=17 Score=35.52 Aligned_cols=71 Identities=24% Similarity=0.340 Sum_probs=43.1
Q ss_pred CCCeEEEEec--cCCCHHHHHHHHHH--cCCCCCCccEEeecccc-CCCCChH------HHHHHHH---HhhhcCCCeEE
Q 017303 114 QDSRVVVVGD--VHGQLHDVLFLLRD--AGFPSKNCFFVFNGDYV-DRGAWGL------ETFLLLL---AWKVFLPHRVY 179 (374)
Q Consensus 114 ~~~~i~ViGD--IHG~~~dL~~ll~~--~g~~~~~~~~vfLGDyV-DRG~~s~------evl~lL~---~lk~~~P~~v~ 179 (374)
..-++.|||| .+|.|..-+..+.. +|-.-.-+-+|.+||-+ |-|..+. +.+.-++ .|. .--|
T Consensus 42 gslsflvvGDwGr~g~~nqs~va~qmg~ige~l~idfvlS~GDNfYd~G~~~~~Dp~Fq~sF~nIYT~pSLQ----kpWy 117 (336)
T KOG2679|consen 42 GSLSFLVVGDWGRRGSFNQSQVALQMGEIGEKLDIDFVLSTGDNFYDTGLTSENDPRFQDSFENIYTAPSLQ----KPWY 117 (336)
T ss_pred CceEEEEEcccccCCchhHHHHHHHHHhHHHhccceEEEecCCcccccCCCCCCChhHHhhhhhcccCcccc----cchh
Confidence 3458999999 68988776665543 33222223388899977 6666542 2222222 222 1357
Q ss_pred EeccCcccc
Q 017303 180 LLRGNHESK 188 (374)
Q Consensus 180 lLRGNHE~~ 188 (374)
.+.||||.+
T Consensus 118 ~vlGNHDyr 126 (336)
T KOG2679|consen 118 SVLGNHDYR 126 (336)
T ss_pred hhccCcccc
Confidence 899999986
No 130
>PF02875 Mur_ligase_C: Mur ligase family, glutamate ligase domain This Prosite entry is a subset of the Pfam family.; InterPro: IPR004101 The bacterial cell wall provides strength and rigidity to counteract internal osmotic pressure, and protection against the environment. The peptidoglycan layer gives the cell wall its strength, and helps maintain the overall shape of the cell. The basic peptidoglycan structure of both Gram-positive and Gram-negative bacteria is comprised of a sheet of glycan chains connected by short cross-linking polypeptides. Biosynthesis of peptidoglycan is a multi-step (11-12 steps) process comprising three main stages: (1) formation of UDP-N-acetylmuramic acid (UDPMurNAc) from N-acetylglucosamine (GlcNAc). (2) addition of a short polypeptide chain to the UDPMurNAc. (3) addition of a second GlcNAc to the disaccharide-pentapeptide building block and transport of this unit through the cytoplasmic membrane and incorporation into the growing peptidoglycan layer. Stage two involves four key Mur ligase enzymes: MurC (6.3.2.8 from EC) [], MurD (6.3.2.9 from EC) [], MurE (6.3.2.13 from EC) [] and MurF (6.3.2.10 from EC) []. These four Mur ligases are responsible for the successive additions of L-alanine, D-glutamate, meso-diaminopimelate or L-lysine, and D-alanyl-D-alanine to UDP-N-acetylmuramic acid. All four Mur ligases are topologically similar to one another, even though they display low sequence identity. They are each composed of three domains: an N-terminal Rossmann-fold domain responsible for binding the UDPMurNAc substrate; a central domain (similar to ATP-binding domains of several ATPases and GTPases); and a C-terminal domain (similar to dihydrofolate reductase fold) that appears to be associated with binding the incoming amino acid. The conserved sequence motifs found in the four Mur enzymes also map to other members of the Mur ligase family, including folylpolyglutamate synthetase, cyanophycin synthetase and the capB enzyme from Bacillales []. This entry represents the C-terminal domain from all four stage 2 Mur enzymes: UDP-N-acetylmuramate-L-alanine ligase (MurC), UDP-N-acetylmuramoylalanine-D-glutamate ligase (MurD), UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase (MurE), and UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (MurF). This entry also includes the C-terminal domain of folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate and cyanophycin synthetase that catalyses the biosynthesis of the cyanobacterial reserve material multi-L-arginyl-poly-L-aspartate (cyanophycin) []. The C-terminal domain is almost always associated with the cytoplasmic peptidoglycan synthetases, N-terminal domain (see IPR000713 from INTERPRO).; GO: 0005524 ATP binding, 0016874 ligase activity, 0009058 biosynthetic process; PDB: 2Y68_A 3UAG_A 4UAG_A 2UAG_A 1E0D_A 2XPC_A 2WJP_A 2VTE_A 2Y67_A 1EEH_A ....
Probab=46.31 E-value=40 Score=26.28 Aligned_cols=69 Identities=17% Similarity=0.050 Sum_probs=47.0
Q ss_pred eEEEEeccCCCHHHHHHHHHHcCC-CCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCc
Q 017303 117 RVVVVGDVHGQLHDVLFLLRDAGF-PSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNH 185 (374)
Q Consensus 117 ~i~ViGDIHG~~~dL~~ll~~~g~-~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNH 185 (374)
.+.|+=|---|.+.+.++++.+.. .+..+.++.+|+.-|+|....+....+..+...+...+++...|+
T Consensus 13 ~~~vi~D~ahNp~s~~a~l~~l~~~~~~~~~i~V~G~~~d~g~~~~~~~~~~~~~~~~~~d~vi~~~~~~ 82 (91)
T PF02875_consen 13 GPTVIDDYAHNPDSIRALLEALKELYPKGRIIAVFGAMGDLGSKDKDFHEEIGELAAQLADVVILTGDNP 82 (91)
T ss_dssp TEEEEEET--SHHHHHHHHHHHHHHCTTSEEEEEEEEBTT-HTSHHHCHHHHHHHHTTCSSEEEEETSBT
T ss_pred CcEEEEECCCCHHHHHHHHHHHHHhccCCcEEEEEccccccccccHHHHHHHHHHHHhcCCEEEEcCCCC
Confidence 567888877788888888877642 234455888999999888888766666665555666766665554
No 131
>cd07387 MPP_PolD2_C PolD2 (DNA polymerase delta, subunit 2), C-terminal domain. PolD2 (DNA polymerase delta, subunit 2) is an auxiliary subunit of the eukaryotic DNA polymerase delta (PolD) complex thought to play a regulatory role and to serve as a scaffold for PolD assembly by interacting simultaneously with all of the other three subunits. PolD2 is catalytically inactive and lacks the active site residues required for phosphoesterase activity in other members of this superfamily. PolD2 is also involved in the recruitment of several proteins regulating DNA metabolism, including p21, PDIP1, PDIP38, PDIP46, and WRN. Human PolD consists of four subunits: p125 (PolD1), p50 (PolD2), p66(PolD3), and p12(PolD4). PolD is one of three major replicases in eukaryotes. PolD also plays an essential role in translesion DNA synthesis, homologous recombination, and DNA repair. Within the PolD complex, PolD2 tightly associates with PolD3. PolD2 belongs to the metallophosphatase (MPP) superfamily
Probab=45.35 E-value=60 Score=31.24 Aligned_cols=67 Identities=15% Similarity=0.204 Sum_probs=0.0
Q ss_pred EEEEeccC-----CCHHHHHHHHHHcCC----------CCCCccEEeeccccCCCCChHHHH------------------
Q 017303 118 VVVVGDVH-----GQLHDVLFLLRDAGF----------PSKNCFFVFNGDYVDRGAWGLETF------------------ 164 (374)
Q Consensus 118 i~ViGDIH-----G~~~dL~~ll~~~g~----------~~~~~~~vfLGDyVDRG~~s~evl------------------ 164 (374)
+++|+||| -+...|+.+.+-+.- ...-.++|..||.|+.-.+..+..
T Consensus 2 i~~vSgL~ig~~~~~~~~l~ll~d~L~G~~g~~~~~~~~s~I~rlIIaGn~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (257)
T cd07387 2 IALVSGLGLGGNAESSLSLQLLVDWLTGQLGDEEEQSSASSIVRLIIAGNSLSKSTQGKDSQTKARYLTKKSSAASVEAV 81 (257)
T ss_pred EEEEcccccCCCccchHHHHHHHHHhcCCCCCccccccccceEEEEEECCcccccccccchhhhhhccccccchhhHHHH
Q ss_pred ----HHHHHhhhcCCCeEEEeccCcc
Q 017303 165 ----LLLLAWKVFLPHRVYLLRGNHE 186 (374)
Q Consensus 165 ----~lL~~lk~~~P~~v~lLRGNHE 186 (374)
.+|..+...-| |.+++||||
T Consensus 82 ~~ld~~l~~l~~~i~--V~imPG~~D 105 (257)
T cd07387 82 KELDNFLSQLASSVP--VDLMPGEFD 105 (257)
T ss_pred HHHHHHHHhhhcCCe--EEECCCCCC
No 132
>PRK05340 UDP-2,3-diacylglucosamine hydrolase; Provisional
Probab=32.80 E-value=1.4e+02 Score=27.66 Aligned_cols=24 Identities=17% Similarity=0.469 Sum_probs=19.6
Q ss_pred CHHHHHHHHHHCCCcEEEEeccCC
Q 017303 249 GPDSTEEFLKKFSLKLIIRSHEGP 272 (374)
Q Consensus 249 g~~~~~~fl~~~~l~~IIrGH~~~ 272 (374)
..+.+.+.+++.+.+++|+||+..
T Consensus 175 ~~~~~~~~~~~~~~~~~i~GH~H~ 198 (241)
T PRK05340 175 NPEAVAALMEKHGVDTLIHGHTHR 198 (241)
T ss_pred CHHHHHHHHHHhCCCEEEECcccC
Confidence 345677888889999999999973
No 133
>TIGR01854 lipid_A_lpxH UDP-2,3-diacylglucosamine hydrolase. This model represents LpxH, UDP-2,3-diacylglucosamine hydrolase, and essential enzyme in E. coli that catalyzes the fourth step in lipid A biosynthesis. Note that Pseudomonas aeruginosa has both a member of this family that shares this function and a more distant homolog, designated LpxH2, that does not. Many species that produce lipid A lack an lpxH gene in this family; some of those species have an lpxH2 gene instead, although for which the function is unknown.
Probab=30.85 E-value=1.5e+02 Score=27.42 Aligned_cols=24 Identities=13% Similarity=0.462 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHCCCcEEEEeccCC
Q 017303 249 GPDSTEEFLKKFSLKLIIRSHEGP 272 (374)
Q Consensus 249 g~~~~~~fl~~~~l~~IIrGH~~~ 272 (374)
.+..+.++++..+.+++|+||+..
T Consensus 173 ~~~~~~~~~~~~~~~~~i~GHtH~ 196 (231)
T TIGR01854 173 NPAEVAAVMRRYGVDRLIHGHTHR 196 (231)
T ss_pred CHHHHHHHHHHcCCCEEEECCccC
Confidence 455678888889999999999973
No 134
>PF06874 FBPase_2: Firmicute fructose-1,6-bisphosphatase; InterPro: IPR009164 Fructose 1,6-bisphosphatase catalyses the hydrolysis of fructose 1,6-bisphosphate to fructose 6-phosphate []. This is an essential reaction in the process of gluconeogenesis, the process by which non-carbohydrate precursors are converted to glucose, and hence this enzyme is found almost universally. Enzyme activity can be regulated by a number of different mechanisms including AMP inhibition, cylic AMP-dependent phosphorylation and light-dependent-activation. This entry represents a group of fructose 1,6-bisphosphatases found within the Firmicutes (low GC Gram-positive bacteria) which do not show any significant sequence similarity to the enzymes from other organisms. The Bacillus subtilis enzyme is inhibited by AMP, though this can be overcome by phosphoenolpyruvate, and is dependent on Mn(2+) [, ]. Mutants lacking this enzyme are apparently still able to grow on gluconeogenic growth substrates such as malate and glycerol.; GO: 0042132 fructose 1,6-bisphosphate 1-phosphatase activity, 0006094 gluconeogenesis
Probab=28.56 E-value=49 Score=35.79 Aligned_cols=23 Identities=22% Similarity=0.429 Sum_probs=20.1
Q ss_pred CCeEEEEeccCCCHHHHHHHHHH
Q 017303 115 DSRVVVVGDVHGQLHDVLFLLRD 137 (374)
Q Consensus 115 ~~~i~ViGDIHG~~~dL~~ll~~ 137 (374)
.+.-.+++||||.|+++..+|+.
T Consensus 32 KGTEhF~SDlHGEyeAF~HiLrn 54 (640)
T PF06874_consen 32 KGTEHFMSDLHGEYEAFDHILRN 54 (640)
T ss_pred CCceEeeeccccchHHHHHHHHc
Confidence 35778999999999999999964
No 135
>COG2908 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=28.44 E-value=58 Score=30.98 Aligned_cols=26 Identities=15% Similarity=0.266 Sum_probs=19.9
Q ss_pred HHHHHHHHHHCCCcEEEEeccCCCCc
Q 017303 250 PDSTEEFLKKFSLKLIIRSHEGPDAR 275 (374)
Q Consensus 250 ~~~~~~fl~~~~l~~IIrGH~~~~~~ 275 (374)
+..+.+-+++++++.+|+||+...+.
T Consensus 176 ~~~v~~~~~~~~vd~vI~GH~Hr~ai 201 (237)
T COG2908 176 PAAVADEARRHGVDGVIHGHTHRPAI 201 (237)
T ss_pred HHHHHHHHHHcCCCEEEecCcccHhh
Confidence 34566667899999999999975443
No 136
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=26.13 E-value=93 Score=28.73 Aligned_cols=79 Identities=20% Similarity=0.254 Sum_probs=56.5
Q ss_pred cEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCccccceecccCCHH----------------HHHHHhcccch
Q 017303 146 FFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHESKYCTSVYGFEK----------------EVMAKYGDKGK 209 (374)
Q Consensus 146 ~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE~~~~~~~~gf~~----------------e~~~~yg~~~~ 209 (374)
.+||+| -|-+.-|.+.+|-+|+.+|-.+.++ -|+-|.|..++...|.. |..+.| -.
T Consensus 41 ~lVvlG----SGGHT~EMlrLl~~l~~~y~~r~yI-~a~tD~mS~~k~~~F~~~~a~~~a~~~~ipRsReVgQS~---lt 112 (211)
T KOG3339|consen 41 TLVVLG----SGGHTGEMLRLLEALQDLYSPRSYI-AADTDEMSEQKARSFELSLAHCKAKNYEIPRSREVGQSW---LT 112 (211)
T ss_pred EEEEEc----CCCcHHHHHHHHHHHHhhcCceEEE-EecCchhhHHHHHhhhccccccchhheecchhhhhhhhh---hh
Confidence 588887 5889999999999999999877766 88999987766544432 222222 23
Q ss_pred hhhhhcccccCCCcceEEEccCc
Q 017303 210 HAYRKCLGCFEGLPLASLIDPSM 232 (374)
Q Consensus 210 ~l~~~~~~~f~~LPlaaiidp~~ 232 (374)
.+|..+...+.++++...+-|..
T Consensus 113 Sv~Tti~all~s~~lv~RirPdl 135 (211)
T KOG3339|consen 113 SVFTTIWALLQSFVLVWRIRPDL 135 (211)
T ss_pred hHHHHHHHHHHHheEEEecCCCE
Confidence 56666677777778877777654
No 137
>PF13258 DUF4049: Domain of unknown function (DUF4049)
Probab=25.65 E-value=2.8e+02 Score=26.67 Aligned_cols=40 Identities=25% Similarity=0.378 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHHhcCCCeEEeccCCCCCeEEEEeccCCC
Q 017303 87 DVFDTLVLTASKILHKEPNCVVIDDFDQDSRVVVVGDVHGQ 127 (374)
Q Consensus 87 ~~~~~ll~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG~ 127 (374)
..+..|+..---||.+-..-+-++. ..-.|+++.||--|.
T Consensus 58 ~~~~~~ln~rdmiln~lh~hvflk~-daitpciflgdhtgd 97 (318)
T PF13258_consen 58 KTLYSLLNTRDMILNELHQHVFLKD-DAITPCIFLGDHTGD 97 (318)
T ss_pred HHHHHHhhHhHHHHHhhhheEEecC-CCcccceeecCcccc
Confidence 3455666555556666555555554 344466666665554
No 138
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=25.41 E-value=4.4e+02 Score=24.59 Aligned_cols=57 Identities=23% Similarity=0.249 Sum_probs=27.6
Q ss_pred eEEEEeccCCCHHHHHHH----HHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEeccCcc
Q 017303 117 RVVVVGDVHGQLHDVLFL----LRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLLRGNHE 186 (374)
Q Consensus 117 ~i~ViGDIHG~~~dL~~l----l~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lLRGNHE 186 (374)
.+.|+|+.+......... ++..+.. . .+.|+|.|++. -++..++.. -.++++...+|
T Consensus 218 ~l~i~G~~~~~~~~~~~~~~~~i~~~~~~--~-~v~~~~~~~~~----~~~~~~~~~------ad~~v~ps~~e 278 (366)
T cd03822 218 RLLVAGETHPDLERYRGEAYALAERLGLA--D-RVIFINRYLPD----EELPELFSA------ADVVVLPYRSA 278 (366)
T ss_pred EEEEeccCccchhhhhhhhHhHHHhcCCC--C-cEEEecCcCCH----HHHHHHHhh------cCEEEeccccc
Confidence 566777665544433322 4444432 1 26667766542 244444433 34555554444
No 139
>cd07398 MPP_YbbF-LpxH Escherichia coli YbbF/LpxH and related proteins, metallophosphatase domain. YbbF/LpxH is an Escherichia coli UDP-2,3-diacylglucosamine hydrolase thought to catalyze the fourth step of lipid A biosynthesis, in which a precursor UDP-2,3-diacylglucosamine is hydrolyzed to yield 2,3-diacylglucosamine 1-phosphate and UMP. YbbF belongs to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues l
Probab=23.71 E-value=71 Score=28.69 Aligned_cols=23 Identities=9% Similarity=0.202 Sum_probs=18.3
Q ss_pred HHHHHHHHHHCCCcEEEEeccCC
Q 017303 250 PDSTEEFLKKFSLKLIIRSHEGP 272 (374)
Q Consensus 250 ~~~~~~fl~~~~l~~IIrGH~~~ 272 (374)
+..+.+.++..+.+++|+||+..
T Consensus 178 ~~~~~~~~~~~~~~~~i~GH~H~ 200 (217)
T cd07398 178 EEAVARLARRKGVDGVICGHTHR 200 (217)
T ss_pred HHHHHHHHHhcCCCEEEECCCCC
Confidence 34566677889999999999973
No 140
>TIGR00282 metallophosphoesterase, MG_246/BB_0505 family. A member of this family from Mycoplasma Pneumoniae has been crystallized and described as a novel phosphatase.
Probab=22.46 E-value=58 Score=31.49 Aligned_cols=39 Identities=23% Similarity=0.228 Sum_probs=25.2
Q ss_pred cEEeeccccCCCCChHHHH-HHHHHhhhcCCCeEEEeccCcccc
Q 017303 146 FFVFNGDYVDRGAWGLETF-LLLLAWKVFLPHRVYLLRGNHESK 188 (374)
Q Consensus 146 ~~vfLGDyVDRG~~s~evl-~lL~~lk~~~P~~v~lLRGNHE~~ 188 (374)
+++|+||+|.+ .+.+.+ ..|-.+|..++..+.+ .|=|..
T Consensus 2 ~ilfiGDi~G~--~Gr~~l~~~L~~lk~~~~~D~vI--aNgEn~ 41 (266)
T TIGR00282 2 KFLFIGDVYGK--AGRKIVKNNLPQLKSKYQADLVI--ANGENT 41 (266)
T ss_pred eEEEEEecCCH--HHHHHHHHHHHHHHHhCCCCEEE--EcCccc
Confidence 48999999944 444444 4456777777755444 466665
No 141
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=21.81 E-value=3e+02 Score=19.42 Aligned_cols=47 Identities=19% Similarity=0.225 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCCeEEeccCCCCCeEEEEeccCC-CHHHHHHHHHHcCC
Q 017303 94 LTASKILHKEPNCVVIDDFDQDSRVVVVGDVHG-QLHDVLFLLRDAGF 140 (374)
Q Consensus 94 ~~a~~il~~ep~l~~l~~~~~~~~i~ViGDIHG-~~~dL~~ll~~~g~ 140 (374)
..+.+.|.+.|.+..+........+.|.+|--. ...++.+.++++|+
T Consensus 14 ~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~~~~~~~i~~~i~~~Gy 61 (62)
T PF00403_consen 14 KKVEKALSKLPGVKSVKVDLETKTVTVTYDPDKTSIEKIIEAIEKAGY 61 (62)
T ss_dssp HHHHHHHHTSTTEEEEEEETTTTEEEEEESTTTSCHHHHHHHHHHTTS
T ss_pred HHHHHHHhcCCCCcEEEEECCCCEEEEEEecCCCCHHHHHHHHHHhCc
Confidence 455677888899877765345678999999665 78999999999886
No 142
>COG4320 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.80 E-value=55 Score=32.69 Aligned_cols=61 Identities=15% Similarity=0.163 Sum_probs=34.0
Q ss_pred HHHhcCCCeEEeccCCCCCeEEEEeccC-CCHHHHHHHHHHcCCCCCCccEEeeccccC--CCCChHHHHHHHHHhh
Q 017303 98 KILHKEPNCVVIDDFDQDSRVVVVGDVH-GQLHDVLFLLRDAGFPSKNCFFVFNGDYVD--RGAWGLETFLLLLAWK 171 (374)
Q Consensus 98 ~il~~ep~l~~l~~~~~~~~i~ViGDIH-G~~~dL~~ll~~~g~~~~~~~~vfLGDyVD--RG~~s~evl~lL~~lk 171 (374)
+-++.-|-.+ ++...++||||.| |||.++... +...++=.-||=. -|++-..++.++.+|.
T Consensus 44 ~~~~~~p~~l-----p~~p~tw~cGD~HLgN~ga~~~~--------~G~V~f~i~DFDe~~~g~~~~DlvRl~~Sl~ 107 (410)
T COG4320 44 QDMKTWPWSL-----PKTPFTWLCGDAHLGNFGAARNS--------KGNVVFKIADFDEGHLGQYIWDLVRLAVSLV 107 (410)
T ss_pred HHHhcCcccc-----CCCCceEEecccccccchhhccC--------CCceEEEecccchhhccchHHHHHHHHHHHH
Confidence 3455556333 3455899999999 888776442 1221222333311 2555666666666654
No 143
>COG0281 SfcA Malic enzyme [Energy production and conversion]
Probab=21.31 E-value=1.4e+02 Score=30.97 Aligned_cols=55 Identities=29% Similarity=0.344 Sum_probs=43.7
Q ss_pred eccCCCH----HHHHHHHHHcCCCCCCccEEeeccccCCCCChHHHHHHHHHhhhcCCCeEEEe
Q 017303 122 GDVHGQL----HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAWGLETFLLLLAWKVFLPHRVYLL 181 (374)
Q Consensus 122 GDIHG~~----~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~s~evl~lL~~lk~~~P~~v~lL 181 (374)
=|+||.- ..|.+.|+..|.+-.+.+++++| -|..++.+..+|.++... +.+++++
T Consensus 173 DDqqGTaiv~lA~llnalk~~gk~l~d~kiv~~G----AGAAgiaia~~l~~~g~~-~~~i~~~ 231 (432)
T COG0281 173 DDQQGTAIVTLAALLNALKLTGKKLKDQKIVING----AGAAGIAIADLLVAAGVK-EENIFVV 231 (432)
T ss_pred ccccHHHHHHHHHHHHHHHHhCCCccceEEEEeC----CcHHHHHHHHHHHHhCCC-cccEEEE
Confidence 4799985 46667778888888888899987 689999999999987653 3577775
No 144
>COG1692 Calcineurin-like phosphoesterase [General function prediction only]
Probab=21.29 E-value=2.5e+02 Score=27.16 Aligned_cols=67 Identities=25% Similarity=0.240 Sum_probs=32.8
Q ss_pred CeEEEEeccCCCH--HHHHHHHHHcCCCCCCccEEeeccccCCCCC-hHHHHHHHHHhhhcCCCeEEEeccCccc
Q 017303 116 SRVVVVGDVHGQL--HDVLFLLRDAGFPSKNCFFVFNGDYVDRGAW-GLETFLLLLAWKVFLPHRVYLLRGNHES 187 (374)
Q Consensus 116 ~~i~ViGDIHG~~--~dL~~ll~~~g~~~~~~~~vfLGDyVDRG~~-s~evl~lL~~lk~~~P~~v~lLRGNHE~ 187 (374)
|++.++|||-|.- ..+..-|..+...-.-+-+|.+|.....|.- ..+....|+.. .-=++-.|||=+
T Consensus 1 mriLfiGDvvGk~Gr~~v~~~Lp~lk~kyk~dfvI~N~ENaa~G~Git~k~y~~l~~~-----G~dviT~GNH~w 70 (266)
T COG1692 1 MRILFIGDVVGKPGRKAVKEHLPQLKSKYKIDFVIVNGENAAGGFGITEKIYKELLEA-----GADVITLGNHTW 70 (266)
T ss_pred CeEEEEecccCcchHHHHHHHhHHHHHhhcCcEEEEcCccccCCcCCCHHHHHHHHHh-----CCCEEecccccc
Confidence 4677777777763 2333333322221111225556666654442 34455555443 223556677754
Done!