BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017305
(374 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1TYY|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From
Salmonella Enterica
pdb|1TYY|B Chain B, Crystal Structure Of Aminoimidazole Riboside Kinase From
Salmonella Enterica
pdb|1TZ3|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase
Complexed With Aminoimidazole Riboside
pdb|1TZ3|B Chain B, Crystal Structure Of Aminoimidazole Riboside Kinase
Complexed With Aminoimidazole Riboside
Length = 339
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 121 PDKQ--YWE--AGGNCNVAIAAARLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSE 176
P+KQ Y + G + NV + ARLG +C IG +G++ GRFL V QD G+ + +
Sbjct: 39 PEKQNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRL 98
Query: 177 DTD 179
D D
Sbjct: 99 DAD 101
>pdb|1TZ6|A Chain A, Crystal Structure Of Aminoimidazole Riboside Kinase From
Salmonella Enterica Complexed With Aminoimidazole
Riboside And Atp Analog
pdb|1TZ6|B Chain B, Crystal Structure Of Aminoimidazole Riboside Kinase From
Salmonella Enterica Complexed With Aminoimidazole
Riboside And Atp Analog
Length = 339
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 121 PDKQ--YWE--AGGNCNVAIAAARLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSE 176
P+KQ Y + G + NV + ARLG +C IG +G++ GRFL V QD G+ + +
Sbjct: 39 PEKQNSYLKCPGGASANVGVCVARLGGECGFIGCLGDDDAGRFLRQVFQDNGVDVTFLRL 98
Query: 177 DTD 179
D D
Sbjct: 99 DAD 101
>pdb|2QCV|A Chain A, Crystal Structure Of A Putative
5-Dehydro-2-Deoxygluconokinase (Iolc) From Bacillus
Halodurans C-125 At 1.90 A Resolution
Length = 332
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/273 (21%), Positives = 108/273 (39%), Gaps = 36/273 (13%)
Query: 80 KSIDVATLGNLCVDIVLNVPQLPPPSRDARKAYMDQLSASPPDKQYWEAGGNCNVAIAAA 139
+ D+ +G C+D LN + P + + + SP N+ I ++
Sbjct: 10 REFDLIAIGRACID--LNAVEYNRPXEET-XTFSKYVGGSP-----------ANIVIGSS 55
Query: 140 RLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSEDTDGVDTSSASYETLLCWVLVDP 199
+LGL IG + ++ +GRF+ + G+ + D +G ++T L + +
Sbjct: 56 KLGLKAGFIGKIADDQHGRFIESYXRGVGVDTSNLVVDQEG-------HKTGLAFTEIKS 108
Query: 200 SQRHGFCSRADFSKEPAFSWMNKLSAEVKTA-IKHSKVLFCNGYGFDEL-SPALIISALE 257
+ CS + ++ A +++ EV A I+ SK+L +G + S ++ A+
Sbjct: 109 PEE---CSILXYRQDVADLYLS--PEEVNEAYIRRSKLLLVSGTALSKSPSREAVLKAIR 163
Query: 258 YAAQVGTSIFFDPGPRGKSLSSGTPEEQRALSYFXXXXXXXXXXXXEAESLTGLRNPITA 317
A + + F+ R S TPEE Y+ E L N
Sbjct: 164 LAKRNDVKVVFELDYRPYSWE--TPEETAV--YYSLVAEQSDIVIGTREEFDVLENRTEK 219
Query: 318 G--QELLRKGLRT--KWVVVKMGPRGSILVTKS 346
G E +R + + +V+K G GS TK+
Sbjct: 220 GDNDETIRYLFKHSPELIVIKHGVEGSFAYTKA 252
>pdb|3HJ6|A Chain A, Structure Of Halothermothrix Orenii Fructokinase (Frk)
pdb|3HJ6|B Chain B, Structure Of Halothermothrix Orenii Fructokinase (Frk)
Length = 327
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 110/299 (36%), Gaps = 47/299 (15%)
Query: 82 IDVATLGNLCVDIVLNVPQLPPPSRDARKAYMDQLSASPPDKQYWEAGGNCNVAIAAARL 141
+DV +LG + VD + + ++ S+ + Y SP N+A+ +RL
Sbjct: 22 LDVVSLGEILVDXI-STEEVNSLSQS--REYTRHFGGSP-----------ANIAVNLSRL 67
Query: 142 GLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSEDTDGVDTSSASYETLLCWVLVDPSQ 201
G I +G + +G +LLDVL+ E I G+ +D E V V S
Sbjct: 68 GKKVALISRLGADAFGNYLLDVLKGEQIITDGIQQDK----------ERRTTIVYVSKST 117
Query: 202 RHGFCSRADFSKEPAFSWMNKLSAEVKTAIKHSKVLFCNGYGFDELSPA--LIISALEYA 259
R + + + + + E+ IK SKV + + PA I A YA
Sbjct: 118 RT--PDWLPYREADXYLQEDDIIFEL---IKRSKVFHLSTFILSR-KPARDTAIKAFNYA 171
Query: 260 AQVGTSIFFDPG------PRGKSLSSGTPEEQRALSYFXXXXXXXXXXXXEAESLTGLRN 313
+ G + FDP P G +G EE + + F +A L G +
Sbjct: 172 REQGKIVCFDPCYRKVLWPEGDD-GAGVVEEIISRADF------VKPSLDDARHLFGPDS 224
Query: 314 PITAGQELLRKGLRTKWVVVKMGPRGSILVTKSSISCAPAFKXXXXXXXXXXXGMWQPW 372
P + L G+ K V++ +G G I I PAF W +
Sbjct: 225 PENYVKRYLELGV--KAVILTLGEEGVIASDGEEIIRIPAFSEDAVDVTGAGDAFWSGF 281
>pdb|4DU5|A Chain A, Crystal Structure Of Pfkb Protein From Polaromonas Sp.
Js666
pdb|4DU5|B Chain B, Crystal Structure Of Pfkb Protein From Polaromonas Sp.
Js666
pdb|4DU5|C Chain C, Crystal Structure Of Pfkb Protein From Polaromonas Sp.
Js666
pdb|4DU5|D Chain D, Crystal Structure Of Pfkb Protein From Polaromonas Sp.
Js666
Length = 336
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 85/228 (37%), Gaps = 38/228 (16%)
Query: 128 AGGNCNVAIAAARLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSEDTDGVDTSSAS 187
AG NVAI ARLGL +G + GR+LL EGI D S
Sbjct: 58 AGAETNVAIGLARLGLKVGWASRLGTDSXGRYLLAAXAAEGI------------DCSH-- 103
Query: 188 YETLLCWVLVDPSQRHGFCSRADFS--KEPAFSWMNKLSAEVKTA---IKHSKVLFCNGY 242
V+ D +Q+ GF + + +P + K SA I + +L
Sbjct: 104 -------VVCDATQKTGFQFKGKVTDGSDPPVEYHRKGSAASHXGVADIDEAWLLSARHL 156
Query: 243 GFDELSPALIISALEYAAQ-------VGTSIFFDPGPRGKSLSSGTPEEQR-ALSYFXXX 294
+ PA+ + L A + G S+ FDP R + TPE R A++
Sbjct: 157 HATGVFPAISATTLPAARKTXDLXRAAGRSVSFDPNLRPTLWA--TPELXRDAINDLATR 214
Query: 295 XXXXXXXXXEAESLTGLRNPITAGQELLRKGLRTKWVVVKMGPRGSIL 342
E LTG P G + L K VVVK+G G+
Sbjct: 215 ADWVLPGXEEGRFLTGETTP--EGVARFYRQLGAKLVVVKLGAEGAYF 260
>pdb|3GBU|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase
Ph1459 From Pyrococcus Horikoshii In Complex With Atp
pdb|3GBU|B Chain B, Crystal Structure Of An Uncharacterized Sugar Kinase
Ph1459 From Pyrococcus Horikoshii In Complex With Atp
pdb|3GBU|C Chain C, Crystal Structure Of An Uncharacterized Sugar Kinase
Ph1459 From Pyrococcus Horikoshii In Complex With Atp
pdb|3GBU|D Chain D, Crystal Structure Of An Uncharacterized Sugar Kinase
Ph1459 From Pyrococcus Horikoshii In Complex With Atp
pdb|3IH0|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase
Ph1459 From Pyrococcus Horikoshii In Complex With
Amp-Pnp
pdb|3IH0|B Chain B, Crystal Structure Of An Uncharacterized Sugar Kinase
Ph1459 From Pyrococcus Horikoshii In Complex With
Amp-Pnp
Length = 313
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 129 GGNCNVAIAAARLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSED 177
G NVA+ +RLG+ I VGN+ +G +L++ L E + G+ +D
Sbjct: 34 GAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKD 82
>pdb|3EWM|A Chain A, Crystal Structure Of An Uncharacterized Sugar Kinase
Ph1459 From Pyrococcus Horikoshii
pdb|3EWM|B Chain B, Crystal Structure Of An Uncharacterized Sugar Kinase
Ph1459 From Pyrococcus Horikoshii
Length = 313
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%)
Query: 129 GGNCNVAIAAARLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSED 177
G NVA+ +RLG+ I VGN+ +G +L++ L E + G+ +D
Sbjct: 34 GAPANVAVGVSRLGVKSSLISKVGNDPFGEYLIEELSKENVDTRGIVKD 82
>pdb|3PL2|A Chain A, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase
(Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc
13032 Kitasato At 1.89 A Resolution
pdb|3PL2|B Chain B, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase
(Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc
13032 Kitasato At 1.89 A Resolution
pdb|3PL2|C Chain C, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase
(Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc
13032 Kitasato At 1.89 A Resolution
pdb|3PL2|D Chain D, Crystal Structure Of A 5-Keto-2-Deoxygluconokinase
(Ncgl0155, Cgl0158) From Corynebacterium Glutamicum Atcc
13032 Kitasato At 1.89 A Resolution
Length = 319
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 88/219 (40%), Gaps = 22/219 (10%)
Query: 140 RLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSEDTDGVDTSSASYETLLCWVLVDP 199
R G + + VGN+ +G +LL L+ G+ ++ D +++T + + + P
Sbjct: 53 RHGHNSALLSRVGNDPFGEYLLAELERLGVDNQYVATDQ--------TFKTPVTFCEIFP 104
Query: 200 SQRHGFCSRADFSKEPAFSWMNKLSAEVK-TAIKHSKVLFCNGYGF-DELSPALIISALE 257
F +EP +N SA+V ++ + +L+ GF +E S L
Sbjct: 105 PDDFPLY----FYREPKAPDLNIESADVSLDDVREADILWFTLTGFSEEPSRGTHREILT 160
Query: 258 YAAQVGTSIF-FDPGPRG-KSLSSGTPEEQRALSYFXXXXXXXXXXXXEAESLTGLRNPI 315
A +IF D P +S T + + AL + E E G P
Sbjct: 161 TRANRRHTIFDLDYRPXFWESPEEATKQAEWALQH----STVAVGNKEECEIAVGETEPE 216
Query: 316 TAGQELLRKGLRTKWVVVKMGPRGSILVTKSSISCAPAF 354
AG+ LL +G+ + +VK GP+G TK P F
Sbjct: 217 RAGRALLERGV--ELAIVKQGPKGVXAXTKDETVEVPPF 253
>pdb|1V19|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
pdb|1V19|B Chain B, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
pdb|1V1A|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound 2-Keto-3-Deoxygluconate And Adp
pdb|1V1A|B Chain B, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound 2-Keto-3-Deoxygluconate And Adp
pdb|1V1B|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound Atp
pdb|1V1B|B Chain B, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound Atp
pdb|1V1B|C Chain C, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound Atp
pdb|1V1B|D Chain D, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
With Bound Atp
pdb|1V1S|A Chain A, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
pdb|1V1S|B Chain B, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
pdb|1V1S|C Chain C, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
pdb|1V1S|D Chain D, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
pdb|1V1S|E Chain E, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
pdb|1V1S|F Chain F, 2-Keto-3-Deoxygluconate Kinase From Thermus Thermophilus
(Crystal Form 2)
Length = 309
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 15/90 (16%)
Query: 82 IDVATLGNLCVDIVLNVPQLPPPSRDARKAYMDQLSASPPDKQYWEAGGNCNVAIAAARL 141
++V T G V +V PQ P R R + + G NVA+A ARL
Sbjct: 2 LEVVTAGEPLVALV---PQEPGHLRGKRLL------------EVYVGGAEVNVAVALARL 46
Query: 142 GLDCVTIGHVGNEIYGRFLLDVLQDEGIGM 171
G+ +G VG + G + + L+ EG+ +
Sbjct: 47 GVKVGFVGRVGEDELGAMVEERLRAEGVDL 76
>pdb|2FV7|A Chain A, Crystal Structure Of Human Ribokinase
pdb|2FV7|B Chain B, Crystal Structure Of Human Ribokinase
Length = 331
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 21/121 (17%)
Query: 231 IKHSKVLFCNGYGFDELSPALIISALEYAAQVGTSIFFDPGPRGKSLSSGTPEEQRALSY 290
I +KV+ C E++PA + AL A + G F+P P +++ P+
Sbjct: 152 ISRAKVMVCQ----LEITPATSLEALTMARRSGVKTLFNPAP---AIADLDPQ------- 197
Query: 291 FXXXXXXXXXXXXEAESLTGLR--NPITAGQE---LLRKGLRTKWVVVKMGPRGSILVTK 345
F EAE LTGL + AG+ LL++G + V++ +G G +++++
Sbjct: 198 FYTLSDVFCCNESEAEILTGLTVGSAADAGEAALVLLKRGCQV--VIITLGAEGCVVLSQ 255
Query: 346 S 346
+
Sbjct: 256 T 256
>pdb|2V78|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2V78|B Chain B, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2V78|C Chain C, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase
pdb|2VAR|A Chain A, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
pdb|2VAR|B Chain B, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
pdb|2VAR|C Chain C, Crystal Structure Of Sulfolobus Solfataricus 2-Keto-3-
Deoxygluconate Kinase Complexed With 2-Keto-3-
Deoxygluconate
Length = 313
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 124 QYWE---AGGNCNVAIAAARLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSEDTD 179
Y+E AG N IA R L C I VGN+ +G+ +++ + +GI + D +
Sbjct: 26 NYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVDNE 84
>pdb|3UT2|A Chain A, Crystal Structure Of Fungal Magkatg2
pdb|3UT2|B Chain B, Crystal Structure Of Fungal Magkatg2
Length = 764
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 10/93 (10%)
Query: 178 TDGVDTSSASYETLLCWVLVDPSQRHGFCSRADFSKEPAFSWMN----KLSAEVKTAIKH 233
TDG+D S + + C S + G C+ A + EP +W++ +LSA V A+K
Sbjct: 486 TDGLDVSKLASTAMACATTYRNSDKRGGCNGARIALEPQRNWVSNNPTQLSA-VLDALKK 544
Query: 234 SKVLFCNGYGFDELSPALII-----SALEYAAQ 261
+ F G ++S A +I +A+E AA+
Sbjct: 545 VQSDFNGSNGNKKVSLADLIVLGGTAAVEKAAK 577
>pdb|3H49|A Chain A, Crystal Structure Of A Putative Ribokinase (Apo Form) From
E.Coli At 1.8a Resolution
pdb|3H49|B Chain B, Crystal Structure Of A Putative Ribokinase (Apo Form) From
E.Coli At 1.8a Resolution
pdb|3IN1|A Chain A, Crystal Structure Of A Putative Ribokinase In Complex With
Adp From E.Coli
pdb|3IN1|B Chain B, Crystal Structure Of A Putative Ribokinase In Complex With
Adp From E.Coli
Length = 325
Score = 31.2 bits (69), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 12/107 (11%)
Query: 79 VKSIDVATLGNLCVDIVLNVPQLPPPSRDARKAYMDQLSASPPDKQYWEAGGNC-NVAIA 137
+ ++DV +G VDI L P S++ + + + P ++ GG+ N A
Sbjct: 3 LDNLDVICIGAAIVDI-----PLQPVSKN-----IFDVDSYPLERIAXTTGGDAINEATI 52
Query: 138 AARLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSEDTDGVDTS 184
+RLG +G + G+F+LD + E I + + +D +DTS
Sbjct: 53 ISRLGHRTALXSRIGKDAAGQFILDHCRKENIDIQSLKQDV-SIDTS 98
>pdb|3KD6|A Chain A, Crystal Structure Of Nucleoside Kinase From Chlorobium
Tepidum In Complex With Amp
pdb|3KD6|B Chain B, Crystal Structure Of Nucleoside Kinase From Chlorobium
Tepidum In Complex With Amp
Length = 313
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 304 EAESLTGLRNPITAGQELLRKGLRTKWVVVKMGPRGSILVTKSSISCAPAF 354
EA L+G N + + + G +T +++K G G++L T + I APAF
Sbjct: 178 EARLLSGDPNLVKTARIIREXGPKT--LIIKKGEHGALLFTDNGIFAAPAF 226
>pdb|3LJS|A Chain A, Crystal Structure Of Fructokinase From Xylella Fastidiosa
pdb|3LJS|B Chain B, Crystal Structure Of Fructokinase From Xylella Fastidiosa
pdb|3LKI|A Chain A, Crystal Structure Of Fructokinase With Bound Atp From
Xylella Fastidiosa
pdb|3LKI|B Chain B, Crystal Structure Of Fructokinase With Bound Atp From
Xylella Fastidiosa
Length = 338
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 20/96 (20%)
Query: 138 AARLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSEDTDGVDTSSASYETLLCWVLV 197
ARLG +G +G++ +G FL D + G+ TDG+ +S + +T L +V +
Sbjct: 46 VARLGGAVQFVGXLGSDXFGDFLFDSFAEAGVV-------TDGIVRTSTA-KTALAFVAL 97
Query: 198 DPSQRHGFCSRADFSKEPAFSWMNKLSAEVKTAIKH 233
D HG E +FS+ +A++ ++H
Sbjct: 98 DA---HG---------ERSFSFYRPPAADLLFRVEH 121
>pdb|2DCN|A Chain A, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|B Chain B, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|C Chain C, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|D Chain D, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|E Chain E, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|F Chain F, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|G Chain G, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|H Chain H, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|I Chain I, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|J Chain J, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|K Chain K, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|2DCN|L Chain L, Crystal Structure Of 2-Keto-3-Deoxygluconate Kinase From
Sulfolobus Tokodaii Complexed With
2-Keto-6-Phosphogluconate (Alpha-Furanose Form)
pdb|1WYE|A Chain A, Crystal Structure Of 2-keto-3-deoxygluconate Kinase (form
1) From Sulfolobus Tokodaii
pdb|1WYE|B Chain B, Crystal Structure Of 2-keto-3-deoxygluconate Kinase (form
1) From Sulfolobus Tokodaii
pdb|1WYE|C Chain C, Crystal Structure Of 2-keto-3-deoxygluconate Kinase (form
1) From Sulfolobus Tokodaii
pdb|1WYE|D Chain D, Crystal Structure Of 2-keto-3-deoxygluconate Kinase (form
1) From Sulfolobus Tokodaii
pdb|1WYE|E Chain E, Crystal Structure Of 2-keto-3-deoxygluconate Kinase (form
1) From Sulfolobus Tokodaii
pdb|1WYE|F Chain F, Crystal Structure Of 2-keto-3-deoxygluconate Kinase (form
1) From Sulfolobus Tokodaii
Length = 311
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 125 YWE---AGGNCNVAIAAARLGLDCVTIGHVGNEIYGRFLLDVLQDEGIGMVGMSED 177
Y+E AG N +A + G +C I VG++ +G ++ L+ +G+ + M D
Sbjct: 27 YFEKHVAGSEANYCVAFIKQGNECGIIAKVGDDEFGYNAIEWLRGQGVDVSHMKID 82
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,002,178
Number of Sequences: 62578
Number of extensions: 451336
Number of successful extensions: 936
Number of sequences better than 100.0: 17
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 918
Number of HSP's gapped (non-prelim): 19
length of query: 374
length of database: 14,973,337
effective HSP length: 100
effective length of query: 274
effective length of database: 8,715,537
effective search space: 2388057138
effective search space used: 2388057138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)