BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017306
(374 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 305 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGDGTIDFPEFL 361
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 362 IMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 407
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 408 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 435
Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 7/59 (11%)
Query: 286 APARQLFGQLDKDGDGYLSDVELLPIIGKL--HPSERYYAKQQADYIISQADTDKDGRL 342
A ++ F DKDGDG ++ EL ++ L +P+E + +I++ D D DG +
Sbjct: 302 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTE-----AELQDMINEVDADGDGTI 355
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGDGTIDFPEFL 369
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 370 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 415
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 416 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 443
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGDGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 116 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 143
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 286 APARQLFGQLDKDGDGYLSDVELLPIIGKL--HPSERYYAKQQADYIISQADTDKDGRL 342
A ++ F DKDGDG ++ EL ++ L +P+E +I++ D D DG +
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQD-----MINEVDADGDGTI 63
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 27/152 (17%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVR----ERDSDRDGKVNFK 256
E F+ D DGDG + E + +NP ++ E+R E D D +G V+F
Sbjct: 14 EAFSLFDKDGDGCITTRELGTVMRSL-GQNP------TEAELRDMMSEIDRDGNGTVDFP 66
Query: 257 EFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLH 316
EF + +++ D+E R+ F DKDG+G++S EL ++ +L
Sbjct: 67 EFLGMMARKMKDTDNE-------------EEIREAFRVFDKDGNGFVSAAELRHVMTRLG 113
Query: 317 PSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
+ ++ D +I ADTD DG++ E +
Sbjct: 114 EK---LSDEEVDEMIRAADTDGDGQVNYEEFV 142
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGDGTIDFPEFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ ++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 371 TMMARKMKYTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 416
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 417 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGDGTIDFPEFL 369
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ ++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 370 TMMARKMKYTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 415
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 416 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 443
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D DG ++F EF
Sbjct: 313 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGDGTIDFPEFL 369
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ ++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 370 TMMARKMKYTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 415
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 416 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 443
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 277 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 333
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 334 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 379
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 380 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 407
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 117 -LTDEEVDQMIREADIDGDGQVNYEEFVQ 144
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 371 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 416
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 417 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 371 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 416
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 417 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 336
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 337 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 382
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 383 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 410
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 280 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 336
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 337 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 382
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 383 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 410
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 68
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 69 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 113
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 114 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 141
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 66
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 67 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 111
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 112 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 139
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 315 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 371
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 372 TMMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 417
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 418 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 445
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 18 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 74
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 75 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 119
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 120 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 147
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 371 TMMARWMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 416
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 417 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 16 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 72
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 73 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 117
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 118 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 145
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 68
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 69 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 113
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 114 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 141
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 116 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 117 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 20 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 76
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 77 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 121
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 122 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 149
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 116 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEX-- 116
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 117 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEX-- 115
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 116 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 143
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 117 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 13 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 69
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 70 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 114
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 115 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 142
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 117 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 67
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 68 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 112
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 113 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 140
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 12 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 68
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 69 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 113
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 114 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 141
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 117 -LTDEEVDEMIREADIDGDGQVNYEEFVQ 144
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 19/150 (12%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 314 KEAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ ++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 371 TMMARKMKYTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK- 416
Query: 320 RYYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 417 --LTDEEVDEMIREADIDGDGQVNYEEFVQ 444
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 20/149 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 10 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFLT 66
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 67 MMARKMKDTDSE--------------EIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 110
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +A+ D DG++ E ++
Sbjct: 111 -LTDEEVDEMIREANIDGDGQVNYEEFVQ 138
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+GY+S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVMTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +A+ D DG++ E ++
Sbjct: 116 -LTDEEVDEMIREANIDGDGQVNYEEFVQ 143
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 23/115 (20%)
Query: 243 RERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGY 302
R D++ DG ++F+EF L S S ++ + F D DG+GY
Sbjct: 70 RTFDANGDGTIDFREFIIAL--------------SVTSRGKLEQKLKWAFSMYDLDGNGY 115
Query: 303 LSDVELLPIIGKLH---------PSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
+S E+L I+ ++ P + +++ + I Q DT++DG+L+L E I
Sbjct: 116 ISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI 170
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 17/109 (15%)
Query: 163 THDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF 222
T D N DG + F E+ V + + W F+ D DG+G ++ E +
Sbjct: 71 TFDANGDGTIDFREFIIALSV--TSRGKLEQKLKW----AFSMYDLDGNGYISKAEMLEI 124
Query: 223 LHPADTKNPKLILWLSKEE----------VRERDSDRDGKVNFKEFFHG 261
+ A K ++ + ++E R+ D++RDGK++ +EF G
Sbjct: 125 VQ-AIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRG 172
Score = 28.5 bits (62), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Query: 288 ARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEM 347
A +F D +GDG ++ I L + R +Q+ + S D D +G ++ EM
Sbjct: 65 AEHVFRTFDANGDG---TIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEM 121
Query: 348 IENPYVFYSAI 358
+E Y +
Sbjct: 122 LEIVQAIYKMV 132
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+G++S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGFISAAELRHVMTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRL 342
++ D +I +AD D DG++
Sbjct: 117 -LTDEEVDEMIREADIDGDGQV 137
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 19/148 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+G++S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGFISAAELRHVMTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMI 348
++ D +I +AD D DG++ E +
Sbjct: 116 -LTDEEVDEMIREADIDGDGQVNYEEFV 142
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + L ++ + E D+D +G +NF EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAEL---QDXINEVDADGNGTINFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
++ D E R+ F DKDG+GY+S EL + L
Sbjct: 71 XXARCXKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVXTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D I +AD D DG++ E ++
Sbjct: 116 -LTDEEVDEXIREADIDGDGQVNYEEFVQ 143
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+G++S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGFISAAELRHVMTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRL 342
++ D +I +AD D DG++
Sbjct: 117 -LTDEEVDEMIREADIDGDGQV 137
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+G++S EL ++ L
Sbjct: 71 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGFISAAELRHVMTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRL 342
++ D +I +AD D DG++
Sbjct: 116 -LTDEEVDEMIREADIDGDGQV 136
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 87 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 141
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 23/114 (20%)
Query: 246 DSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSD 305
D ++DG++ F EF L S S T+D R F D D DGY++
Sbjct: 73 DENKDGRIEFSEFIQAL--------------SVTSRGTLDEKLRWAFKLYDLDNDGYITR 118
Query: 306 VELLPIIGKLH---------PSERYYAKQQADYIISQADTDKDGRLTLLEMIEN 350
E+L I+ ++ P E +++ D I + D + DG+LTL E E
Sbjct: 119 NEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEG 172
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF +
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLN 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E ++ F DKDG+G++S EL ++ L
Sbjct: 71 LMARKMKDTDSE-------------EELKEAFRVFDKDGNGFISAAELRHVMTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 116 -LTDEEVDEMIREADVDGDGQVNYEEFVQ 143
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF +
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLN 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E ++ F DKDG+G++S EL ++ L
Sbjct: 71 LMARKMKDTDSE-------------EKLKEAFRVFDKDGNGFISAAELRHVMTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 116 -LTDEEVDEMIREADVDGDGQVNYEEFVQ 143
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF +
Sbjct: 11 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLN 67
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E ++ F DKDG+G++S EL ++ L
Sbjct: 68 LMARKMKDTDSE-------------EELKEAFRVFDKDGNGFISAAELRHVMTNLGEK-- 112
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D +I +AD D DG++ E ++
Sbjct: 113 -LTDEEVDEMIREADVDGDGQVNYEEFVQ 140
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E R+ F DKDG+G++S EL ++ L
Sbjct: 72 MMARKMKDTDSE-------------EEIREAFRVFDKDGNGFISAAELRHVMTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRL 342
++ D +I ++D D DG++
Sbjct: 117 -LTDEEVDEMIRESDIDGDGQV 137
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 88 EAFRVFDKDGNGFISAAELR---HVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEF 142
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ ++E R+ F DKDG+G++S EL ++ L
Sbjct: 71 MMARKMKDSEEE---------------IREAFRVFDKDGNGFISAAELRHVMTNLGEK-- 113
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMI 348
++ D +I +AD D DG++ E +
Sbjct: 114 -LTDEEVDEMIREADIDGDGQVNYEEFV 140
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 27/146 (18%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFK 256
E F D DGDG + + E + D +NP ++EE + E D+D +G + F
Sbjct: 14 EAFGLFDKDGDGCITVEELATVIRSLD-QNP------TEEELQDMISEVDADGNGTIEFD 66
Query: 257 EFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLH 316
EF + V++ D E ++ F DKD +GY+S EL ++ L
Sbjct: 67 EFLSLMAKKVKDTDAE-------------EELKEAFKVFDKDQNGYISASELRHVMINLG 113
Query: 317 PSERYYAKQQADYIISQADTDKDGRL 342
++ + +I +AD D DG++
Sbjct: 114 EK---LTDEEVEQMIKEADLDGDGQV 136
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 7/56 (12%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKL--HPSERYYAKQQADYIISQADTDKDGRL 342
++ FG DKDGDG ++ EL +I L +P+E ++ +IS+ D D +G +
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTE-----EELQDMISEVDADGNGTI 63
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 40/133 (30%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEF----- 219
DK+ DG ++ E T +R+ D N ++ ++ + DADG+G + EF
Sbjct: 20 DKDGDGCITVEEL--ATVIRSLDQNPTEEEL----QDMISEVDADGNGTIEFDEFLSLMA 73
Query: 220 -----------------------NDFLHPADTKNPKLILW--LSKEEV----RERDSDRD 250
N ++ ++ ++ + L L+ EEV +E D D D
Sbjct: 74 KKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGD 133
Query: 251 GKVNFKEFFHGLF 263
G+VN++EF +
Sbjct: 134 GQVNYEEFVKMMM 146
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E +NP ++ + E D+D +G ++F EF
Sbjct: 15 EAFSLFDKDGDGTITTKELGTVXRSL-GQNPTEAEL--QDXINEVDADGNGTIDFPEFLT 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
++ D E R+ F DKDG+GY+S EL + L
Sbjct: 72 XXARKXKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVXTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D I +AD D DG++ E ++
Sbjct: 117 -LTDEEVDQXIREADIDGDGQVNYEEFVQ 144
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 19/149 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVXRSL-GQNPTEAEL--QDXINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
++ D E R+ F DKDG+GY+S EL + L
Sbjct: 71 XXARKXKDTDSE-------------EEIREAFRVFDKDGNGYISAAELRHVXTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMIE 349
++ D I +AD D DG++ E ++
Sbjct: 116 -LTDEEVDEXIREADIDGDGQVNYEEFVQ 143
Score = 34.7 bits (78), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 48/129 (37%), Gaps = 8/129 (6%)
Query: 132 ADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191
DG I EL + Q + D + +G + F E+ + D +S
Sbjct: 23 GDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDFPEFLTXXARKXKDTDS- 81
Query: 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDG 251
E F D DG+G ++ E H KL E +RE D D DG
Sbjct: 82 ----EEEIREAFRVFDKDGNGYISAAELR---HVXTNLGEKLTDEEVDEXIREADIDGDG 134
Query: 252 KVNFKEFFH 260
+VN++EF
Sbjct: 135 QVNYEEFVQ 143
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 19/148 (12%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF +
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLN 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E ++ F DKD +G++S EL ++ L
Sbjct: 72 LMARKMKDTDSE-------------EELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRLTLLEMI 348
++ D +I +AD D DG++ E +
Sbjct: 117 -LTDEEVDEMIREADVDGDGQINYEEFV 143
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 40/128 (31%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEF----- 219
DK+ DG ++ E T +R+ N ++ ++ N DADG+G ++ EF
Sbjct: 21 DKDGDGCITTKEL--GTVMRSLGQNPTEAEL----QDMINEVDADGNGTIDFPEFLNLMA 74
Query: 220 -----------------------NDFLHPADTKNPKLILW--LSKEEV----RERDSDRD 250
N F+ A+ ++ L L+ EEV RE D D D
Sbjct: 75 RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD 134
Query: 251 GKVNFKEF 258
G++N++EF
Sbjct: 135 GQINYEEF 142
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 64/142 (45%), Gaps = 19/142 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF +
Sbjct: 15 EAFSLFDKDGDGCITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLN 71
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ +++ D E ++ F DKD +G++S EL ++ L
Sbjct: 72 LMARKMKDTDSE-------------EELKEAFRVFDKDQNGFISAAELRHVMTNLGEK-- 116
Query: 321 YYAKQQADYIISQADTDKDGRL 342
++ D +I +AD D DG++
Sbjct: 117 -LTDEEVDEMIREADVDGDGQI 137
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 40/128 (31%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEF----- 219
DK+ DG ++ E T +R+ N ++ ++ N DADG+G ++ EF
Sbjct: 21 DKDGDGCITTKEL--GTVMRSLGQNPTEAEL----QDMINEVDADGNGTIDFPEFLNLMA 74
Query: 220 -----------------------NDFLHPADTKNPKLILW--LSKEEV----RERDSDRD 250
N F+ A+ ++ L L+ EEV RE D D D
Sbjct: 75 RKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD 134
Query: 251 GKVNFKEF 258
G++N+ EF
Sbjct: 135 GQINYDEF 142
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
+ F D D G L++ EF P +NP L + + D+D +G+V+FKEF
Sbjct: 25 KRFKKLDLDNSGSLSVEEFMSL--PELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIE 77
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPS-- 318
G+ D E R F D D DGY+S+ EL ++ + +
Sbjct: 78 GVSQFSVKGDKE-------------QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 124
Query: 319 ERYYAKQQADYIISQADTDKDGRLTLLE 346
+ +Q D I AD D DGR++ E
Sbjct: 125 KDTQLQQIVDKTIINADKDGDGRISFEE 152
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
+ F D D G L++ EF P +NP L + + D+D +G+V+FKEF
Sbjct: 24 KRFKKLDLDNSGSLSVEEFMSL--PELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIE 76
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPS-- 318
G+ D E R F D D DGY+S+ EL ++ + +
Sbjct: 77 GVSQFSVKGDKE-------------QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 123
Query: 319 ERYYAKQQADYIISQADTDKDGRLTLLE 346
+ +Q D I AD D DGR++ E
Sbjct: 124 KDTQLQQIVDKTIINADKDGDGRISFEE 151
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
+ F D D G L++ EF P +NP L + + D+D +G+V+FKEF
Sbjct: 11 KRFKKLDLDNSGSLSVEEFMSL--PELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIE 63
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPS-- 318
G+ D E R F D D DGY+S+ EL ++ + +
Sbjct: 64 GVSQFSVKGDKE-------------QKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 110
Query: 319 ERYYAKQQADYIISQADTDKDGRLTLLE 346
+ +Q D I AD D DGR++ E
Sbjct: 111 KDTQLQQIVDKTIINADKDGDGRISFEE 138
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 22/148 (14%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
+ F D D G L++ EF P +NP L + + D+D +G+V+FKEF
Sbjct: 10 KRFKKLDLDNSGSLSVEEFMSL--PELQQNP-----LVQRVIDIFDTDGNGEVDFKEFIE 62
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPS-- 318
G+ S + R F D D DGY+S+ EL ++ + +
Sbjct: 63 GV-------------SQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 109
Query: 319 ERYYAKQQADYIISQADTDKDGRLTLLE 346
+ +Q D I AD D DGR++ E
Sbjct: 110 KDTQLQQIVDKTIINADKDGDGRISFEE 137
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 19/151 (12%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262
F+ DADG G +++ E + K L EEV D D G ++F+EF L
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEV---DEDGSGTIDFEEF---L 76
Query: 263 FDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYY 322
+VR ++ S +LF D++ DGY+ EL I S +
Sbjct: 77 VMMVRQMKEDAKGKSEE-------ELAELFRIFDRNADGYIDAEELAEI---FRASGEHV 126
Query: 323 AKQQADYIISQADTDKDGRL---TLLEMIEN 350
++ + ++ D + DGR+ L+M+E
Sbjct: 127 TDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 157
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 108 LNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMET---- 163
+ ++ K + L LF D N ADGYI+ +EL + E H T E+E+
Sbjct: 83 MKEDAKGKSEEELAELFRIFDRN-ADGYIDAEELAEIFRASGE----HVTDEEIESLMKD 137
Query: 164 HDKNKDGFVSFAEY 177
DKN DG + F E+
Sbjct: 138 GDKNNDGRIDFDEF 151
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 16/107 (14%)
Query: 242 VRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDG 301
+ E +++ +G++NF EF + +R D E R+ F D+DGDG
Sbjct: 52 IAEAENNNNGQLNFTEFCGIMAKQMRETDTE-------------EEMREAFKIFDRDGDG 98
Query: 302 YLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
++S EL ++ L ++ D +I +AD D DG + E +
Sbjct: 99 FISPAELRFVMINLGEK---VTDEEIDEMIREADFDGDGMINYEEFV 142
Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 15/64 (23%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILW--LSKEEV----RERDSDRDGKVN 254
E F D DGDG F+ PA+ + + L ++ EE+ RE D D DG +N
Sbjct: 87 EAFKIFDRDGDG---------FISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMIN 137
Query: 255 FKEF 258
++EF
Sbjct: 138 YEEF 141
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLS 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ ++ D E ++ ++A F D+DG+G +S EL ++ L
Sbjct: 71 LMARKMKEQDSE--------EELIEA-----FKVFDRDGNGLISAAELRHVMTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRL 342
+ D +I +AD D DG +
Sbjct: 116 -LTDDEVDEMIREADIDGDGHI 136
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+GL++ E H KL E +RE D D DG +N++EF
Sbjct: 87 EAFKVFDRDGNGLISAAELR---HVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 19/142 (13%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAEL--QDMINEVDADGNGTIDFPEFLS 70
Query: 261 GLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER 320
+ ++ D E ++ ++A F D+DG+G +S EL ++ L
Sbjct: 71 LMARKMKEQDSE--------EELIEA-----FKVFDRDGNGLISAAELRHVMTNLGEK-- 115
Query: 321 YYAKQQADYIISQADTDKDGRL 342
+ D +I +AD D DG +
Sbjct: 116 -LTDDEVDEMIREADIDGDGHI 136
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D DG+GL++ E H KL E +RE D D DG +N++EF
Sbjct: 87 EAFKVFDRDGNGLISAAELR---HVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 63/151 (41%), Gaps = 19/151 (12%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262
F+ DADG G +++ E + K L EEV D D G ++F+EF L
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEV---DEDGSGTIDFEEF---L 76
Query: 263 FDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYY 322
+VR ++ S + F D++ DGY+ EL I S +
Sbjct: 77 VMMVRQMKEDAKGKSEE-------ELAECFRIFDRNADGYIDAEELAEI---FRASGEHV 126
Query: 323 AKQQADYIISQADTDKDGRL---TLLEMIEN 350
++ + ++ D + DGR+ L+M+E
Sbjct: 127 TDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 157
Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMET----HDKNKDGFVS 173
+ L F D N ADGYI+ +EL + E H T E+E+ DKN DG +
Sbjct: 93 EELAECFRIFDRN-ADGYIDAEELAEIFRASGE----HVTDEEIESLMKDGDKNNDGRID 147
Query: 174 FAEY 177
F E+
Sbjct: 148 FDEF 151
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 62/143 (43%), Gaps = 19/143 (13%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + + + +NP ++ + E +D +G ++F +F
Sbjct: 314 KEAFSLFDKDGDGGITTKQLGTVMRSLG-QNPTEAEL--QDMINEVGADGNGTIDFPQFL 370
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE 319
+ +++ D E R+ F KDG+GY+S +L ++ L
Sbjct: 371 TMMARKMKDTDSE-------------EEIREAFRVFGKDGNGYISAAQLRHVMTNLGEK- 416
Query: 320 RYYAKQQADYIISQADTDKDGRL 342
++ D +I +A D DG++
Sbjct: 417 --LTDEEVDEMIREAGIDGDGQV 437
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
R+ F DKDG+GY+S EL ++ L ++ D +I +AD D DG++ E +
Sbjct: 9 REAFRVFDKDGNGYISAAELRHVMTNLGEK---LTDEEVDEMIREADIDGDGQVNYEEFV 65
Query: 349 E 349
+
Sbjct: 66 Q 66
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 10 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 66
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
R+ F DKDG+GY+S EL ++ L ++ D +I +AD D DG++ E +
Sbjct: 8 REAFRVFDKDGNGYISAAELRHVMTNLGEK---LTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 349 E 349
+
Sbjct: 65 Q 65
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 9 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
R+ F DKDG+GY+S EL ++ L ++ D +I +AD D DG++ E +
Sbjct: 8 REAFRVFDKDGNGYISAAELRHVMTNLGEK---LTDEEVDEMIREADIDGDGQVNYEEFV 64
Query: 349 E 349
+
Sbjct: 65 Q 65
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 9 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 37.0 bits (84), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
R+ F DKDG+GY+S EL ++ L ++ D +I +AD D DG++ E +
Sbjct: 12 REAFRVFDKDGNGYISAAELRHVMTNLGEK---LTDEEVDEMIREADIDGDGQVNYEEFV 68
Query: 349 E 349
+
Sbjct: 69 Q 69
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 13 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 69
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
R+ F DKDG+GY+S EL ++ L ++ D +I +AD D DG++ E +
Sbjct: 5 REAFRVFDKDGNGYISAAELRHVMTNLGEK---LTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 349 E 349
+
Sbjct: 62 Q 62
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 6 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
R+ F DKDG+GY+S EL ++ L ++ D +I +AD D DG++ E +
Sbjct: 11 REAFRVFDKDGNGYISAAELRHVMTNLGEK---LTDEEVDEMIREADIDGDGQVNYEEFV 67
Query: 349 E 349
+
Sbjct: 68 Q 68
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 12 EAFRVFDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 68
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 23/115 (20%)
Query: 246 DSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSD 305
D+D +G V+F++F GL L+R E N + F D + DGY++
Sbjct: 112 DTDHNGAVSFEDFIKGLSILLRGTVQEKLNWA--------------FNLYDINKDGYITK 157
Query: 306 VELLPI-------IGKL-HPSERYYA-KQQADYIISQADTDKDGRLTLLEMIENP 351
E+L I +GK +P + A +Q + + D +KDG +T+ E IE+
Sbjct: 158 EEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESC 212
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 98 WEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRT 157
+EDF+ L + V ++L F D+N DGYI ++E+ D + +A D+M +
Sbjct: 121 FEDFIKGLSILL---RGTVQEKLNWAFNLYDINK-DGYITKEEMLD--IMKAIYDMMGKC 174
Query: 158 ----------QREMET----HDKNKDGFVSFAEY 177
++ +ET DKNKDG V+ E+
Sbjct: 175 TYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEF 208
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 66/164 (40%), Gaps = 20/164 (12%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELTDWN---MQQAERDVMHRTQREMETHDKNKDGFVS 173
T +L +F K+D N DG ++ DEL M+ D Q E T + D +
Sbjct: 330 TKQLTEIFRKLDTNN-DGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMP 388
Query: 174 FAEYEPPTWVRNSDNNSFGYDMGWW-----KEEHFNASDADGDGLLNLTEFNDFLHPADT 228
+ + + S+ + D E F D DG G ++ E AD+
Sbjct: 389 LLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADS 448
Query: 229 KNPKLILWLSKEE----VRERDSDRDGKVNFKEFFHGLFDLVRN 268
+ EE + + D+++DG+V+F EF L + VRN
Sbjct: 449 S-------IQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFVRN 485
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 292 FGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRL---TLLEMI 348
F DKDG G +S EL + + S + ++ + II Q D +KDG + +EM+
Sbjct: 423 FKMFDKDGSGKISTKELFKLFSQADSSIQM---EELESIIEQVDNNKDGEVDFNEFVEML 479
Query: 349 EN 350
+N
Sbjct: 480 QN 481
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F+ DADG G ++ E + +NP +KEE + E D D G ++F+EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRML-GQNP------TKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPS 318
L +VR ++ S F DK+ DG++ D+E L I L +
Sbjct: 79 ---LVMMVRQMKEDAKGKSEE-------ELEDCFRIFDKNADGFI-DIEELGEI--LRAT 125
Query: 319 ERYYAKQQADYIISQADTDKDGRL---TLLEMIEN 350
+ ++ + ++ +D + DGR+ L+M+E
Sbjct: 126 GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPA-DTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D +GDG ++ E F+ KN +L+ + K D+D +G+++ EF
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKS----IDADGNGEIDQNEF 58
Query: 259 --FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLH 316
F+G SDD + + L+ +D DGDG L+ E+ K H
Sbjct: 59 AKFYGSI-----------QGQDLSDDKI--GLKVLYKLMDVDGDGKLTKEEVTSFFKK-H 104
Query: 317 PSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349
E+ A+Q + +AD + DG +TL E +E
Sbjct: 105 GIEKV-AEQ-----VMKADANGDGYITLEEFLE 131
Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 30/148 (20%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF-- 222
D N DG VS+ E + + + N + F + DADG+G ++ EF F
Sbjct: 10 DVNGDGAVSYEEVKAFVSKKRAIKNE------QLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 223 -LHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSD 281
+ D + K+ L K + D D DGK+ KE F + H ++
Sbjct: 64 SIQGQDLSDDKIGL---KVLYKLMDVDGDGKLT-KEEVTSFF--------KKHGIEKVAE 111
Query: 282 DTMDAPARQLFGQLDKDGDGYLSDVELL 309
M A D +GDGY++ E L
Sbjct: 112 QVMKA---------DANGDGYITLEEFL 130
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPA-DTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D +GDG ++ E F+ KN +L+ + K D+D +G+++ EF
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKS----IDADGNGEIDQNEF 58
Query: 259 --FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLH 316
F+G SDD + + L+ +D DGDG L+ E+ K H
Sbjct: 59 AKFYGSI-----------QGQDLSDDKI--GLKVLYKLMDVDGDGKLTKEEVTSFFKK-H 104
Query: 317 PSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349
E+ A+Q + +AD + DG +TL E +E
Sbjct: 105 GIEKV-AEQ-----VMKADANGDGYITLEEFLE 131
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 30/148 (20%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF-- 222
D N DG VS+ E + + + N + F + DADG+G ++ EF F
Sbjct: 10 DVNGDGAVSYEEVKAFVSKKRAIKNE------QLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 223 -LHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSD 281
+ D + K+ L K + D D DGK+ KE F + H ++
Sbjct: 64 SIQGQDLSDDKIGL---KVLYKLMDVDGDGKLT-KEEVTSFF--------KKHGIEKVAE 111
Query: 282 DTMDAPARQLFGQLDKDGDGYLSDVELL 309
M A D +GDGY++ E L
Sbjct: 112 QVMKA---------DANGDGYITLEEFL 130
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F+ DADG G ++ E + +NP +KEE + E D D G ++F+EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRML-GQNP------TKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPS 318
L +VR ++ S F DK+ DG++ D+E L I L +
Sbjct: 79 ---LVMMVRQMKEDAKGKSEE-------ELANCFRIFDKNADGFI-DIEELGEI--LRAT 125
Query: 319 ERYYAKQQADYIISQADTDKDGRL---TLLEMIEN 350
+ ++ + ++ +D + DGR+ L+M+E
Sbjct: 126 GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF + +++ D +G SD LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEFLVMMVRCMKD-DSKGKTEEELSD---------LFRMFDKN 107
Query: 299 GDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349
DGY+ D+E L I+ L + + + ++ D + DGR+ E +E
Sbjct: 108 ADGYI-DLEELKIM--LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 35.8 bits (81), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF L +VR+ D+ S LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKSEE-------ELSDLFRMFDKN 107
Query: 299 GDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349
DGY+ D+E L I+ L + + + ++ D + DGR+ E +E
Sbjct: 108 ADGYI-DLEELKIM--LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F+ DADG G ++ E + +NP +KEE + E D D G ++F+EF
Sbjct: 23 FDMFDADGGGDISTKELGTVMRML-GQNP------TKEELDAIIEEVDEDGSGTIDFEEF 75
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPS 318
L +VR ++ S F DK+ DG++ D+E L I L +
Sbjct: 76 ---LVMMVRQMKEDAKGKSEE-------ELANCFRIFDKNADGFI-DIEELGEI--LRAT 122
Query: 319 ERYYAKQQADYIISQADTDKDGRL---TLLEMIEN 350
+ ++ + ++ +D + DGR+ L+M+E
Sbjct: 123 GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 157
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 35.8 bits (81), Expect = 0.038, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLE 346
+++FG LD+D G++ + EL + S R + ++ DTD DG++ + E
Sbjct: 45 KKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 102
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 35.8 bits (81), Expect = 0.038, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLE 346
+++FG LD+D G++ + EL + S R + ++ DTD DG++ + E
Sbjct: 44 KKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEE 101
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELT------------DWNMQQAERDVMHRTQREMETH 164
T L +F K+D N DG ++ EL D +M A V H + ++
Sbjct: 357 TKELTAIFHKMDKN-GDGQLDRAELIEGYKELMRMKGQDASMLDASA-VEHEVDQVLDAV 414
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224
D +K+G++ ++E+ R + + E F D+D G ++ TE
Sbjct: 415 DFDKNGYIEYSEFVTVAMDRKTLLSR------ERLERAFRMFDSDNSGKISSTELATIFG 468
Query: 225 PADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
+D + W K + E D + DG+V+F EF L L N
Sbjct: 469 VSDVDSET---W--KSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 507
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELT------------DWNMQQAERDVMHRTQREMETH 164
T L +F K+D N DG ++ EL D +M A V H + ++
Sbjct: 334 TKELTAIFHKMDKN-GDGQLDRAELIEGYKELMRMKGQDASMLDASA-VEHEVDQVLDAV 391
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224
D +K+G++ ++E+ R + + E F D+D G ++ TE
Sbjct: 392 DFDKNGYIEYSEFVTVAMDRKTLLSR------ERLERAFRMFDSDNSGKISSTELATIFG 445
Query: 225 PADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
+D + W K + E D + DG+V+F EF L L N
Sbjct: 446 VSDVDSET---W--KSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 484
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 25/164 (15%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELT------------DWNMQQAERDVMHRTQREMETH 164
T L +F K+D N DG ++ EL D +M A V H + ++
Sbjct: 358 TKELTAIFHKMDKN-GDGQLDRAELIEGYKELMRMKGQDASMLDASA-VEHEVDQVLDAV 415
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224
D +K+G++ ++E+ R + + E F D+D G ++ TE
Sbjct: 416 DFDKNGYIEYSEFVTVAMDRKTLLSR------ERLERAFRMFDSDNSGKISSTELATIFG 469
Query: 225 PADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
+D + W K + E D + DG+V+F EF L L N
Sbjct: 470 VSDVDSET---W--KSVLSEVDKNNDGEVDFDEFQQMLLKLCGN 508
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F+ DADG G ++ E + +NP +KEE + E D D G ++F+EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRML-GQNP------TKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPS 318
L +VR ++ S F DK+ DG++ D+E L I L +
Sbjct: 79 ---LVMMVRQMKEDAKGKSEE-------ELADCFRIFDKNADGFI-DIEELGEI--LRAT 125
Query: 319 ERYYAKQQADYIISQADTDKDGRL---TLLEMIEN 350
+ ++ + ++ +D + DGR+ L+M+E
Sbjct: 126 GEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 163 THDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF 222
T D NKDGFV F E+ + + + W+ F DADG+G ++ E D
Sbjct: 65 TFDTNKDGFVDFLEFIAAVNLIMQE--KMEQKLKWY----FKLYDADGNGSIDKNELLDM 118
Query: 223 LHPADTKNPKLILWLSKEE-----VRERDSDRDGKVNFKEFFHGL 262
N + LS EE + D + DG++ +EF +G+
Sbjct: 119 FMAVQALNGQQT--LSPEEFINLVFHKIDINNDGELTLEEFINGM 161
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 35.4 bits (80), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNY--DDEGHNSSHPSDDTMDAPARQLFGQLD 296
+E + E D D G V+F EF L +VR+ D +G SD LF D
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKTEEELSD---------LFRMFD 105
Query: 297 KDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349
K+ DGY+ D+E L I+ L + + + ++ D + DGR+ E +E
Sbjct: 106 KNADGYI-DLEELKIM--LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 27/155 (17%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F+ DADG G ++ E + +NP +KEE + E D D G ++F+EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRML-GQNP------TKEELDAIIEEVDEDGSGTIDFEEF 78
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPS 318
L +VR ++ S F DK+ DG++ D+E L I L +
Sbjct: 79 ---LVMMVRQMKEDAKGKSEE-------ELANCFRIFDKNADGFI-DIEELGEI--LRAT 125
Query: 319 ERYYAKQQADYIISQADTDKDGRL---TLLEMIEN 350
+ ++ + ++ +D + DGR+ L+M+E
Sbjct: 126 GEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
R+ F DKDG+GY+S EL ++ L ++ D +I +AD D DG++ E +
Sbjct: 32 REAFRVEDKDGNGYISAAELRHVMTNLGEK---LTDEEVDEMIREADIDGDGQVNYEEFV 88
Query: 349 E 349
+
Sbjct: 89 Q 89
Score = 34.7 bits (78), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ E H KL E +RE D D DG+VN++EF
Sbjct: 33 EAFRVEDKDGNGYISAAELR---HVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 34.7 bits (78), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF L +VR+ D+ S LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKSEE-------ELSDLFRMFDKN 107
Query: 299 GDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRL 342
DGY+ D++ L I+ L + + + ++ D + DGR+
Sbjct: 108 ADGYI-DLDELKIM--LQATGETITEDDIEELMKDGDKNNDGRI 148
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRL 342
R+ F DKDG+GY+S +L ++ L ++ D +I +AD D DG++
Sbjct: 10 REAFRVFDKDGNGYISAADLRHVMTNLGEK---LTDEEVDEMIREADIDGDGQV 60
Score = 31.6 bits (70), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D DG+G ++ D H KL E +RE D D DG+VN+++F
Sbjct: 11 EAFRVFDKDGNGYISAA---DLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQ 67
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF L +VR+ D+ S LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKSEE-------ELSDLFRMFDKN 107
Query: 299 GDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349
DGY+ D++ L I+ L + + + ++ D + DGR+ E +E
Sbjct: 108 ADGYI-DLDELKIM--LQATGETITEDDIEELMKDGDKNNDGRIDYDEXLE 155
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 246 DSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSD 305
D ++DG ++F E+ L +++ +D R F D DG+G +
Sbjct: 62 DFNKDGYIDFMEYVAALSLVLKG--------------KVDQKLRWYFKLYDVDGNGCIDR 107
Query: 306 VELLPIIGKLHP----SERYYAKQQADYIISQADTDKDGRLTLLEMIE 349
ELL II + +E A++ + + + D + DG L+L E +E
Sbjct: 108 GELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFME 155
Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 12/111 (10%)
Query: 157 TQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNL 216
++ ET D NKDG++ F EY + + W+ F D DG+G ++
Sbjct: 54 VEQMFETFDFNKDGYIDFMEYVAALSL--VLKGKVDQKLRWY----FKLYDVDGNGCIDR 107
Query: 217 TEFNDFLHPADTKNPKLILWLSKEEVR-----ERDSDRDGKVNFKEFFHGL 262
E + + N + ++ EE + D + DG+++ +EF G+
Sbjct: 108 GELLNIIKAIRAIN-RCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGV 157
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 33.9 bits (76), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF L +VR+ D+ S LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKSEE-------ELSDLFRMXDKN 107
Query: 299 GDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349
DGY+ D++ L I+ L + + + ++ D + DGR+ E +E
Sbjct: 108 ADGYI-DLDELKIM--LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 33.5 bits (75), Expect = 0.19, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLE 346
+++F LDKD G++ + EL I+ P R + ++ +++ D D DG++ + E
Sbjct: 45 KKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDE 102
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 33.5 bits (75), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 13/111 (11%)
Query: 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKD 298
+E + E D D G V+F EF L +VR+ D+ S LF DK+
Sbjct: 58 QEMIDEVDEDGSGTVDFDEF---LVMMVRSMKDDSKGKSEE-------ELSDLFRMWDKN 107
Query: 299 GDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349
DGY+ D++ L I+ L + + + ++ D + DGR+ E +E
Sbjct: 108 ADGYI-DLDELKIM--LQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 23/114 (20%)
Query: 246 DSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSD 305
D+D++G ++FKEF L S S ++ F D D +G +S
Sbjct: 73 DADKNGYIDFKEFICAL--------------SVTSRGELNDKLIWAFQLYDLDNNGLISY 118
Query: 306 VELLPIIGKLH---------PSERYYAKQQADYIISQADTDKDGRLTLLEMIEN 350
E+L I+ ++ P + +++ + I + D +KDG+LTL E E
Sbjct: 119 DEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEG 172
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 11/110 (10%)
Query: 198 WKEEHFNASDADGDGLLNLTEFNDFLHPADTK--NPKLILWLSKEEVRERDSDRDGKVNF 255
+ E FN DAD +G ++ EF L N KLI W + D D +G +++
Sbjct: 64 FAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLI-W----AFQLYDLDNNGLISY 118
Query: 256 KEFFHGLFDLVRNYDDEGHNSSHPSD-DTMDAPARQLFGQLDKDGDGYLS 304
E + D + Y G P D DT + ++F +DK+ DG L+
Sbjct: 119 DEMLR-IVDAI--YKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLT 165
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 13/74 (17%)
Query: 242 VRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDG 301
+ E D+D +G ++F EF + +++ D E R+ F DKDG+G
Sbjct: 7 INEVDADGNGTIDFPEFLTMMARKMKDTDSE-------------EEIREAFRVFDKDGNG 53
Query: 302 YLSDVELLPIIGKL 315
Y+S EL ++ L
Sbjct: 54 YISAAELRHVMTNL 67
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 11/60 (18%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F A D DGDG + + E + A P L +EE +RE D D+DG+VN++EF
Sbjct: 12 FRAFDQDGDGHITVDELRRAM--AGLGQP-----LPQEELDAMIREADVDQDGRVNYEEF 64
Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 9/54 (16%)
Query: 292 FGQLDKDGDGYLSDVEL---LPIIGKLHPSERYYAKQQADYIISQADTDKDGRL 342
F D+DGDG+++ EL + +G+ P E + D +I +AD D+DGR+
Sbjct: 12 FRAFDQDGDGHITVDELRRAMAGLGQPLPQE------ELDAMIREADVDQDGRV 59
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
E F D DG+GL++ E H KL E +RE D D DG +N++EF
Sbjct: 12 EAFKVFDRDGNGLISAAELR---HVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 290 QLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRL 342
+ F D+DG+G +S EL ++ L + D +I +AD D DG +
Sbjct: 12 EAFKVFDRDGNGLISAAELRHVMTNLGEK---LTDDEVDEMIREADIDGDGHI 61
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 32.7 bits (73), Expect = 0.30, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLE 346
+++F LDKD DG++ + EL I+ R + ++ +++ D D DG++ + E
Sbjct: 44 KKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 24/112 (21%)
Query: 207 DADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRER----DSDRDGKVNFKEFFHGL 262
D +G G +N F DFL K+ +KEE+ + D D GK++FK
Sbjct: 52 DKEGTGKMN---FGDFLTVM---TQKMSEKDTKEEILKAFKLFDDDETGKISFK------ 99
Query: 263 FDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGK 314
+L R + G N + D +++ + D+DGDG +S+ E L I+ K
Sbjct: 100 -NLKRVAKELGENLT-------DEELQEMIDEADRDGDGEVSEQEFLRIMKK 143
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 32.3 bits (72), Expect = 0.43, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRE--------RDSDRDG 251
E F DA+GDG + E F+ D LSK++V+E D + DG
Sbjct: 10 EAAFKKLDANGDGYVTALELQTFMVTLDAYKA-----LSKDKVKEASAKLIKMADKNSDG 64
Query: 252 KVNFKEFFHGLFDLV 266
K++ +EF + +L+
Sbjct: 65 KISKEEFLNANAELL 79
Score = 31.2 bits (69), Expect = 0.88, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 292 FGQLDKDGDGYLSDVELLPIIGKLHPSE---RYYAKQQADYIISQADTDKDGRLTLLEMI 348
F +LD +GDGY++ +EL + L + + K+ + +I AD + DG+++ E +
Sbjct: 13 FKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFL 72
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.3 bits (72), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 23/163 (14%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERD-----------VMHRTQREMETHD 165
T L +F K D N DG ++ EL + + V H + ++ D
Sbjct: 334 TKELTAIFHKXDKN-GDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVD 392
Query: 166 KNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225
+K+G++ ++E+ R + + E F D+D G ++ TE
Sbjct: 393 FDKNGYIEYSEFVTVAXDRKTLLSRERL------ERAFRXFDSDNSGKISSTELATIFGV 446
Query: 226 ADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
+D + W K + E D + DG+V+F EF L L N
Sbjct: 447 SDVDSET---W--KSVLSEVDKNNDGEVDFDEFQQXLLKLCGN 484
>pdb|2OCA|A Chain A, The Crystal Structure Of T4 Uvsw
Length = 510
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 236 WLSKEEVRERDSDRDGKVNFKEFFHG--LFDLVRNYDDEGHNSSHPSDDTMDAPARQLFG 293
W++K ++ D + V FK HG +FDL++N D+ + S +D R +
Sbjct: 335 WIAKLAIKLAQKDENAFVMFKHVSHGKAIFDLIKNEYDKVYYVS----GEVDTETRNIMK 390
Query: 294 QLDKDGDGYL 303
L ++G G +
Sbjct: 391 TLAENGKGII 400
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 31.6 bits (70), Expect = 0.67, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%)
Query: 285 DAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRL 342
DA +++F LDKD G++ + EL ++ R + +++ D+D DG++
Sbjct: 40 DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKI 97
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 31.6 bits (70), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Query: 92 EEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER 151
+ ++EDF+ A L + V ++L F D+N DGYIN++E+ D + +A
Sbjct: 66 QTGSVKFEDFVTALSIL---LRGTVHEKLRWTFNLYDINK-DGYINKEEMMD--IVKAIY 119
Query: 152 DVMHR---------TQRE-----METHDKNKDGFVSFAEY 177
D+M + T R+ + DKNKDG V+ E+
Sbjct: 120 DMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 20/100 (20%)
Query: 92 EEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER 151
+ ++EDF+ A L + V ++L F D+N DGYIN++E+ D + +A
Sbjct: 69 QTGSVKFEDFVTALSIL---LRGTVHEKLRWTFNLYDINK-DGYINKEEMMD--IVKAIY 122
Query: 152 DVMHR---------TQRE-----METHDKNKDGFVSFAEY 177
D+M + T R+ + DKNKDG V+ E+
Sbjct: 123 DMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 162
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 67/162 (41%), Gaps = 24/162 (14%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELTDW--NMQQAERDVMHRTQREMET------HDKNK 168
T L +F ID N DG ++ EL D + E V Q E E D ++
Sbjct: 345 TKELTDIFRHIDKN-GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDR 403
Query: 169 DGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF--LHPA 226
+G++ ++E+ R S + E F D DG+G +++ E L
Sbjct: 404 NGYIDYSEFVTVAMDRKSLLSKDKL------ESAFQKFDQDGNGKISVDELASVFGLDHL 457
Query: 227 DTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
++K W KE + DS+ DG V+F+EF + L N
Sbjct: 458 ESKT-----W--KEMISGIDSNNDGDVDFEEFCKMIQKLCSN 492
Score = 28.9 bits (63), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 246 DSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSD 305
D DR+G +++ EF D S S D +++ F + D+DG+G +S
Sbjct: 400 DFDRNGYIDYSEFVTVAMD----------RKSLLSKDKLESA----FQKFDQDGNGKISV 445
Query: 306 VELLPIIGKLHPSERYYAKQQADYIISQADTDKDG 340
EL + G H + + + +IS D++ DG
Sbjct: 446 DELASVFGLDHLESKTWKE-----MISGIDSNNDG 475
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 31.2 bits (69), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 20/95 (21%)
Query: 97 EWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHR 156
++EDF+ A L + V ++L F D+N DGYIN++E+ D + +A D+M +
Sbjct: 107 KFEDFVTALSIL---LRGTVHEKLRWTFNLYDINK-DGYINKEEMMD--IVKAIYDMMGK 160
Query: 157 ---------TQRE-----METHDKNKDGFVSFAEY 177
T R+ + DKNKDG V+ E+
Sbjct: 161 YTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEF 195
>pdb|2V53|A Chain A, Crystal Structure Of A Sparc-Collagen Complex
Length = 230
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 18/71 (25%)
Query: 287 PARQLFGQLDKDG-DGYLSDVELLPIIGKLHPSE----RYYAKQQAD---YI-------- 330
P FGQLD+ DGYLS EL P+ L P E R++ D YI
Sbjct: 157 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGC 216
Query: 331 --ISQADTDKD 339
I Q D DKD
Sbjct: 217 FGIKQKDIDKD 227
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 124 FPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183
F ++D +P DGY++ EL ++ + H T R ET D + D +++ E+ +
Sbjct: 162 FGQLDQHPIDGYLSHTELAP--LRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 219
Query: 184 RNSD 187
+ D
Sbjct: 220 KQKD 223
>pdb|2VOV|A Chain A, An Oxidized Tryptophan Facilitates Copper-binding In
Methylococcus Capsulatus Secreted Protein Mope. The
Stucture Of Wild-type Mope To 1.35aa
pdb|2VOX|A Chain A, An Oxidized Tryptophan Facilitates Copper-Binding In
Methylococcus Capsulatus Secreted Protein Mope. The
Stucture Of Mercury Soaked Mope To 1.9aa
Length = 336
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 295 LDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVF 354
LD+DGDG +D + +HP A+ D + S D G ++E +NP +
Sbjct: 5 LDRDGDGSTADADCNDFAPTIHPGA---AEATLDGVDSNCDGRDSGVAEVVETFKNPGTY 61
Query: 355 YSAIF 359
S +
Sbjct: 62 SSPVI 66
>pdb|2VOW|A Chain A, An Oxidized Tryptophan Facilitates Copper-Binding In
Methylococcus Capsulatus Secreted Protein Mope. The
Stucture Of Recombinant Mope To 1.65aa
Length = 336
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 3/65 (4%)
Query: 295 LDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVF 354
LD+DGDG +D + +HP A+ D + S D G ++E +NP +
Sbjct: 5 LDRDGDGSTADADCNDFAPTIHPGA---AEATLDGVDSNCDGRDSGVAEVVETFKNPGTY 61
Query: 355 YSAIF 359
S +
Sbjct: 62 SSPVI 66
>pdb|1NUB|A Chain A, Helix C Deletion Mutant Of Bm-40 Fs-Ec Domain Pair
pdb|1NUB|B Chain B, Helix C Deletion Mutant Of Bm-40 Fs-Ec Domain Pair
Length = 229
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 18/71 (25%)
Query: 287 PARQLFGQLDKDG-DGYLSDVELLPIIGKLHPSE----RYYAKQQAD---YI-------- 330
P FGQLD+ DGYLS EL P+ L P E R++ D YI
Sbjct: 156 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGC 215
Query: 331 --ISQADTDKD 339
I Q D DKD
Sbjct: 216 FGIKQKDIDKD 226
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 124 FPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183
F ++D +P DGY++ EL ++ + H T R ET D + D +++ E+ +
Sbjct: 161 FGQLDQHPIDGYLSHTELAP--LRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 218
Query: 184 RNSD 187
+ D
Sbjct: 219 KQKD 222
>pdb|1BMO|A Chain A, Bm-40, FsEC DOMAIN PAIR
pdb|1BMO|B Chain B, Bm-40, FsEC DOMAIN PAIR
Length = 233
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 18/71 (25%)
Query: 287 PARQLFGQLDKDG-DGYLSDVELLPIIGKLHPSE----RYYAKQQAD---YI-------- 330
P FGQLD+ DGYLS EL P+ L P E R++ D YI
Sbjct: 160 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGC 219
Query: 331 --ISQADTDKD 339
I Q D DKD
Sbjct: 220 FGIKQKDIDKD 230
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 124 FPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183
F ++D +P DGY++ EL ++ + H T R ET D + D +++ E+ +
Sbjct: 165 FGQLDQHPIDGYLSHTELAP--LRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 222
Query: 184 RNSD 187
+ D
Sbjct: 223 KQKD 226
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 22/141 (15%)
Query: 123 LFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQRE-METHDKNKDGFVSFAEYEPPT 181
LF ID + + G I DEL D +++ ++M ++ M+ D +K G + + E+ T
Sbjct: 15 LFKMIDTDNS-GTITFDELKD-GLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT 72
Query: 182 WVRNSDNNSFGYDMGWWKEEH----FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWL 237
N +EE+ F+ D DG G + L E + +
Sbjct: 73 VHLNK----------LEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHI---- 118
Query: 238 SKEEVRERDSDRDGKVNFKEF 258
+ ++E D D DG++++ EF
Sbjct: 119 -DDMIKEIDQDNDGQIDYGEF 138
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKL--HPSERYYAKQQADYIISQADTDKDGRLTLLE 346
++ FG DKDGDG ++ EL +I L +P+E ++ +IS+ D D +G + E
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTE-----EELQDMISEVDADGNGTIEFDE 67
Query: 347 MI 348
+
Sbjct: 68 FL 69
Score = 28.5 bits (62), Expect = 6.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNF 255
+E F D DGDG + + E + D +NP ++EE + E D+D +G + F
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLD-QNP------TEEELQDMISEVDADGNGTIEF 65
Query: 256 KEFF 259
EF
Sbjct: 66 DEFL 69
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLE 346
+++F LDKD G++ + EL I+ R + ++ +++ D D DG++ + E
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
++ F DKD +G++S EL ++ L ++ D +I +AD D DG++ E +
Sbjct: 7 KEAFRVFDKDQNGFISAAELRHVMTNLGEK---LTDEEVDEMIREADVDGDGQINYEEFV 63
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D D +G ++ E H KL E +RE D D DG++N++EF
Sbjct: 8 EAFRVFDKDQNGFISAAELR---HVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 62
>pdb|1SRA|A Chain A, Structure Of A Novel Extracellular Ca2+-Binding Module In
Bm-40(Slash)sparc(Slash)osteonectin
Length = 151
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 31/71 (43%), Gaps = 18/71 (25%)
Query: 287 PARQLFGQLDKDG-DGYLSDVELLPIIGKLHPSE----RYYAKQQAD---YI-------- 330
P FGQLD+ DGYLS EL P+ L P E R++ D YI
Sbjct: 78 PVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGC 137
Query: 331 --ISQADTDKD 339
I Q D DKD
Sbjct: 138 FGIKQKDIDKD 148
Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 124 FPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183
F ++D +P DGY++ EL ++ + H T R ET D + D +++ E+ +
Sbjct: 83 FGQLDQHPIDGYLSHTELAP--LRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI 140
Query: 184 RNSD 187
+ D
Sbjct: 141 KQKD 144
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 30.8 bits (68), Expect = 1.4, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKL--HPSERYYAKQQADYIISQADTDKDGRLTLLE 346
++ FG DKDGDG ++ EL +I L +P+E ++ +IS+ D D +G + E
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLDQNPTE-----EELQDMISEVDADGNGTIEFDE 67
Query: 347 MI 348
+
Sbjct: 68 FL 69
Score = 28.1 bits (61), Expect = 7.7, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 11/64 (17%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNF 255
+E F D DGDG + + E + D +NP ++EE + E D+D +G + F
Sbjct: 13 KEAFGLFDKDGDGCITVEELATVIRSLD-QNP------TEEELQDMISEVDADGNGTIEF 65
Query: 256 KEFF 259
EF
Sbjct: 66 DEFL 69
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 199 KEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
+E F DA+GDG ++ E + L + P + K + E D+D DG ++F+EF
Sbjct: 11 RERIFKRFDANGDGKISAAELGEALKTLGSITPDEV----KHMMAEIDTDGDGFISFQEF 66
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 67/162 (41%), Gaps = 24/162 (14%)
Query: 117 TDRLVLLFPKIDVNPADGYINEDELTDW--NMQQAERDVMHRTQREMET------HDKNK 168
T L +F ID N DG ++ EL D + E V Q E E D ++
Sbjct: 62 TKELTDIFRHIDKN-GDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDR 120
Query: 169 DGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDF--LHPA 226
+G++ ++E+ R S D E F D DG+G +++ E L
Sbjct: 121 NGYIDYSEFVTVAMDRKS---LLSKDK---LESAFQKFDQDGNGKISVDELASVFGLDHL 174
Query: 227 DTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268
++K W KE + DS+ DG V+F+EF + L N
Sbjct: 175 ESKT-----W--KEMISGIDSNNDGDVDFEEFCKMIQKLCSN 209
Score = 28.1 bits (61), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 19/95 (20%)
Query: 246 DSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSD 305
D DR+G +++ EF D S S D +++ F + D+DG+G +S
Sbjct: 117 DFDRNGYIDYSEFVTVAMD----------RKSLLSKDKLESA----FQKFDQDGNGKISV 162
Query: 306 VELLPIIGKLHPSERYYAKQQADYIISQADTDKDG 340
EL + G H + + + +IS D++ DG
Sbjct: 163 DELASVFGLDHLESKTWKE-----MISGIDSNNDG 192
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLE 346
+++F LDKD G++ + EL I+ R + ++ +++ D D DG++ + E
Sbjct: 8 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 20/100 (20%)
Query: 92 EEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER 151
+ ++EDF+ A L + V ++L F D+N DGYIN++E+ D + +A
Sbjct: 66 QTGSVKFEDFVTALSIL---LRGTVHEKLRWTFNLYDINK-DGYINKEEMMD--IVKAIY 119
Query: 152 DVMHR---------TQRE-----METHDKNKDGFVSFAEY 177
D+M T R+ + DKNKDG V+ E+
Sbjct: 120 DMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEF 159
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRL 342
+ +F +D D GYL + EL + K R + + +++ AD D DG++
Sbjct: 45 KDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKI 98
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 30.0 bits (66), Expect = 2.0, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 29/67 (43%), Gaps = 17/67 (25%)
Query: 203 FNASDADGDGLLNLTEFNDF-----LHPADTKNPKLILWLSKEEVRER-DSDRDGKVNFK 256
F A DA+ G L EF + PAD E V +R D+DRDG + F+
Sbjct: 33 FAACDANRSGRLEREEFRALCTELRVRPADA-----------EAVFQRLDADRDGAITFQ 81
Query: 257 EFFHGLF 263
EF G
Sbjct: 82 EFARGFL 88
>pdb|2BWM|A Chain A, 1.8a Crystal Structure Of Of Psathyrella Velutina Lectin
In Complex With Methyl
2-Acetamido-1,2-Dideoxy-1-Seleno-Beta- D-Glucopyranoside
pdb|2BWR|A Chain A, Crystal Structure Of Psathyrella Velutina Lectin At 1.5a
Resolution
pdb|2BWR|B Chain B, Crystal Structure Of Psathyrella Velutina Lectin At 1.5a
Resolution
pdb|2C25|A Chain A, 1.8a Crystal Structure Of Psathyrella Velutina Lectin In
Complex With N-Acetylneuraminic Acid
pdb|2C25|B Chain B, 1.8a Crystal Structure Of Psathyrella Velutina Lectin In
Complex With N-Acetylneuraminic Acid
pdb|2C4D|A Chain A, 2.6a Crystal Structure Of Psathyrella Velutina Lectin In
Complex With N-Acetylglucosamine
Length = 401
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 189 NSFGYDMGWWKEEHFN-ASDADGDGLLNLTEFND 221
N+FGY GW + H +D GDGLL++ F +
Sbjct: 158 NNFGYAQGWRLDRHLRFLADVTGDGLLDVVGFGE 191
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 30.0 bits (66), Expect = 2.2, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D +GDG ++L+E D L + + + + + E D+D DG ++F EF
Sbjct: 6 ERIFKRFDTNGDGKISLSELTDALRTLGSTSADEV----QRMMAEIDTDGDGFIDFNEF 60
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 30.0 bits (66), Expect = 2.3, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D +GDG ++L+E D L + + + + + E D+D DG ++F EF
Sbjct: 5 ERIFKRFDTNGDGKISLSELTDALRTLGSTSADEV----QRMMAEIDTDGDGFIDFNEF 59
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 65/144 (45%), Gaps = 22/144 (15%)
Query: 123 LFPKIDVNPADGYINEDELTDWNMQQAERDV---MHRTQREMETHDKNKDGFVSFAEYEP 179
+F +DV+ + G ++ E+ D + + + +H+ R++ D N G + + ++
Sbjct: 62 IFIALDVDNS-GTLSSQEILDGLKKIGYQKIPPDIHQVLRDI---DSNASGQIHYTDFLA 117
Query: 180 PTWVRNSDNNSFGYDMGWWKEEH----FNASDADGDGLLNLTEFNDFLHPADTKNPKLIL 235
T + + + K+E F D DG+G +++ E D +NP LI
Sbjct: 118 ATIDKQT----------YLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENP-LID 166
Query: 236 WLSKEEVRERDSDRDGKVNFKEFF 259
++E D + DG+++F EF
Sbjct: 167 KAIDSLLQEVDLNGDGEIDFHEFM 190
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 14/69 (20%)
Query: 246 DSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSD 305
D D GK++FK +L R + G N + D +++ + D+DGDG +S+
Sbjct: 21 DDDETGKISFK-------NLKRVAKELGENLT-------DEELQEMIDEADRDGDGEVSE 66
Query: 306 VELLPIIGK 314
E L I+ K
Sbjct: 67 QEFLRIMKK 75
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 21/100 (21%)
Query: 219 FNDFLHPADTKNPKLILWLSKEEVRER----DSDRDGKVNFKEFFHGLFDLVRNYDDEGH 274
F DFL K+ +KEE+ + D D GK++FK +L R + G
Sbjct: 3 FGDFLTVM---TQKMSEKDTKEEILKAFKLFDDDETGKISFK-------NLKRVAKELGE 52
Query: 275 NSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGK 314
N + D +++ + D+DGDG +S+ E L I+ K
Sbjct: 53 NLT-------DEELQEMIDEADRDGDGEVSEQEFLRIMKK 85
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 34/165 (20%)
Query: 203 FNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEE----VRERDSDRDGKVNFKEF 258
F D DG L+ EF L KL L L + E R+ D + G ++ +EF
Sbjct: 43 FRQLDRDGSRSLDADEFRQGL-------AKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEF 95
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPII-GKLHP 317
L P +A F +LD+ GDG ++ +L + G+ HP
Sbjct: 96 LRAL--------------RPPMSQAREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHP 141
Query: 318 SERYYAKQQADYIISQAD----TDKDGRLTLLEMIENPYVFYSAI 358
R + + + D ++KDG++TL E + +YS +
Sbjct: 142 KVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQD----YYSGV 182
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 29.3 bits (64), Expect = 3.3, Method: Composition-based stats.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 108 LNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKN 167
+ D+ K + L LF D N ADGYI+ +EL E + M+ DKN
Sbjct: 5 MKDDSKGKTEEELSDLFRMFDKN-ADGYIDLEELKIMLQATGETITEDDIEELMKDGDKN 63
Query: 168 KDGFVSFAEY 177
DG + + E+
Sbjct: 64 NDGRIDYDEF 73
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
++ F DKD +GY+S EL ++ L ++ + +I +AD D DG++ E +
Sbjct: 12 KEAFKVFDKDQNGYISASELRHVMINLGEK---LTDEEVEQMIKEADLDGDGQVNYEEFV 68
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 3/65 (4%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D D +G ++ +E H KL ++ ++E D D DG+VN++EF
Sbjct: 13 EAFKVFDKDQNGYISASELR---HVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 261 GLFDL 265
+ +
Sbjct: 70 MMMTV 74
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPAD-TKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F DA+GDG ++ E F+ KN +L+ + K D D +G+++ EF
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKA----IDIDGNGEIDLAEF 58
Query: 259 FHGLFDLVRNYDDEGHNSSHPSDDTMD--APARQLFGQLDKDGDGYLSDVELLPIIGKLH 316
++ D D + L+ +D DGDG L+ E+
Sbjct: 59 TK-------------FAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFF---- 101
Query: 317 PSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
+++ ++ D I+ +AD + DG +TL E +
Sbjct: 102 --KKFGYEKVVDQIM-KADANGDGYITLEEFL 130
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 18/96 (18%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224
D N DG VS+ E + + N + F A D DG+G ++L EF F
Sbjct: 10 DANGDGSVSYEEVKAFVSSKRPIKNE------QLLQLIFKAIDIDGNGEIDLAEFTKFAA 63
Query: 225 PADTKNPKLILWLSKEEV------RERDSDRDGKVN 254
++ LS E+V + D+D DGK+
Sbjct: 64 AVKEQD------LSDEKVGLKILYKLMDADGDGKLT 93
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 291 LFGQLDKDGDGYLSDVELLPIIGKLH-----PSERYYAKQQADYIISQADTDKDGRLTLL 345
+F +LDK+GDG L EL+ L E +++ D I+ + D DK+G +
Sbjct: 360 IFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYS 419
Query: 346 EMI 348
E I
Sbjct: 420 EFI 422
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 29.3 bits (64), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 24/112 (21%)
Query: 207 DADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEV----RERDSDRDGKVNFKEFFHGL 262
D DG G ++ EF + K+ S+EE+ R D D GK++FK
Sbjct: 54 DKDGSGTIDFEEFLQMM------TAKMGERDSREEIMKAFRLFDDDETGKISFK------ 101
Query: 263 FDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGK 314
+L R + G N + D +++ + D+DGDG +++ E I+ K
Sbjct: 102 -NLKRVAKELGENMT-------DEELQEMIDEADRDGDGEVNEEEFFRIMKK 145
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 29.3 bits (64), Expect = 4.0, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 28/61 (45%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
+++F LD D G++ + EL + + R + ++ AD D DG++ E
Sbjct: 44 KEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQ 103
Query: 349 E 349
E
Sbjct: 104 E 104
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 61/154 (39%), Gaps = 31/154 (20%)
Query: 212 GLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDD 271
G L + EF F D + + + R D++ D ++F E+ L ++R
Sbjct: 38 GTLFMHEFKRFFKVPDNEEATQYV---EAMFRAFDTNGDNTIDFLEYVAALNLVLRG--- 91
Query: 272 EGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYY-----AKQQ 326
T++ + F DKD +G + ELL I+ ++ ++ A+QQ
Sbjct: 92 -----------TLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQ 140
Query: 327 A---------DYIISQADTDKDGRLTLLEMIENP 351
D I D + DG+L+L E +E
Sbjct: 141 GKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGA 174
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 28.9 bits (63), Expect = 4.8, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 27/61 (44%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMI 348
+ +F +D D GYL EL + K R + + ++ AD D DG++ E
Sbjct: 44 KDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQ 103
Query: 349 E 349
E
Sbjct: 104 E 104
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 43/109 (39%), Gaps = 18/109 (16%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F D D DG +++ E L L K + G++N KEF
Sbjct: 8 QECFQIFDKDNDGKVSIEELGSALRS-----------LGKNPTNAELNTIKGQLNAKEFD 56
Query: 260 HGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVEL 308
F V Y + S + +DA F LDK+G+G + + EL
Sbjct: 57 LATFKTV--YRKPIKTPTEQSKEMLDA-----FRALDKEGNGTIQEAEL 98
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEH----FNASDADGDGLLNLTEFN 220
D NKD VS+ EY W + D+ W + F D GDG+++L EF
Sbjct: 70 DINKDDVVSWEEY-LAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQ 128
Query: 221 DFL 223
++
Sbjct: 129 NYC 131
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 28.9 bits (63), Expect = 5.4, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLE 346
+++F LDKD G++ + EL I+ R + ++ +++ D D G++ + E
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEE 101
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 123 LFPKIDVNPADGYINEDELTDW--NMQQAERDVMHRTQREMETHDKNKDGFVSFAEY 177
+F + D N DG I+ EL D + D + R E++T + DGF+SF E+
Sbjct: 16 IFKRFDTN-GDGKISSSELGDALKTLGSVTPDEVRRMMAEIDT---DGDGFISFDEF 68
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRL 342
++ F DKD +GY+S EL ++ L ++ + +I +AD D DG++
Sbjct: 7 KEAFKVFDKDQNGYISASELRHVMINLGEK---LTDEEVEQMIKEADLDGDGQV 57
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F D D +G ++ +E H KL ++ ++E D D DG+VN++EF
Sbjct: 8 EAFKVFDKDQNGYISASELR---HVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 261 GLF 263
+
Sbjct: 65 MMM 67
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQ-QADYIISQADTDKDGRLTLLEM 347
R+ F D+DG+G++S EL G S Y + + + II + D D DG++ E
Sbjct: 39 REAFKVFDRDGNGFISKQEL----GTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEF 94
Query: 348 I 348
+
Sbjct: 95 V 95
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 28.1 bits (61), Expect = 7.5, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLE 346
+++F LDKD G++ + EL I+ + ++ +++ D D DG++ + E
Sbjct: 44 KKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 28.1 bits (61), Expect = 7.7, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 200 EEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFF 259
+E F+ D DGDG + E + + L ++ + E D+D DG ++F EF
Sbjct: 13 KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAEL---QDMINEVDADGDGTIDFPEFL 69
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 28.1 bits (61), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 123 LFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEY 177
LF D N ADGYI+ DEL E + M+ DKN DG + + E+
Sbjct: 11 LFRMFDKN-ADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 3/72 (4%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260
E F+ D DGDG + E + +NP ++ + E D+D +G ++F EF
Sbjct: 14 EAFSLFDKDGDGTITTKELGTVMRSLG-QNPTEAEL--QDMINEVDADGNGTIDFPEFLT 70
Query: 261 GLFDLVRNYDDE 272
+ +++ D E
Sbjct: 71 MMARKMKDTDSE 82
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 28.1 bits (61), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 24/112 (21%)
Query: 207 DADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRER----DSDRDGKVNFKEFFHGL 262
D +G G N F DFL K + +KEE+ + D D GK++FK
Sbjct: 77 DKEGTGKXN---FGDFLTVXTQKXSE---KDTKEEILKAFKLFDDDETGKISFK------ 124
Query: 263 FDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGK 314
+L R + G N + D ++ + D+DGDG +S+ E L I K
Sbjct: 125 -NLKRVAKELGENLT-------DEELQEXIDEADRDGDGEVSEQEFLRIXKK 168
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 27.7 bits (60), Expect = 9.5, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLE 346
++ F +D+D G++ + EL + PS R + ++ D D DG + + E
Sbjct: 44 KKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDE 101
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 27.7 bits (60), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 290 QLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349
Q+F QLD +GDG L EL+ KL ++ +D SQ + + D L ++
Sbjct: 44 QIFRQLDNNGDGQLDRKELIEGYRKLM---QWKGDTVSDLDSSQIEAEVDHILQSVDFDR 100
Query: 350 NPYVFYSAIFT 360
N Y+ YS T
Sbjct: 101 NGYIEYSEFVT 111
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 201 EHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEF 258
E F D +GDGL++ E H + KL E +RE SD G++N K+F
Sbjct: 88 EAFKVFDKNGDGLISAAELK---HVLTSIGEKLTDAEVDEMLREV-SDGSGEINIKQF 141
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,537,934
Number of Sequences: 62578
Number of extensions: 589255
Number of successful extensions: 2411
Number of sequences better than 100.0: 197
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 1613
Number of HSP's gapped (non-prelim): 491
length of query: 374
length of database: 14,973,337
effective HSP length: 100
effective length of query: 274
effective length of database: 8,715,537
effective search space: 2388057138
effective search space used: 2388057138
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 52 (24.6 bits)