Query 017306
Match_columns 374
No_of_seqs 453 out of 2765
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 07:24:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017306.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017306hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4223 Reticulocalbin, calume 100.0 1.3E-39 2.8E-44 287.7 19.4 269 80-373 48-325 (325)
2 COG5126 FRQ1 Ca2+-binding prot 99.9 5.5E-23 1.2E-27 168.1 10.8 145 106-264 12-156 (160)
3 KOG0027 Calmodulin and related 99.9 2.1E-22 4.5E-27 168.0 11.2 143 117-264 7-149 (151)
4 COG5126 FRQ1 Ca2+-binding prot 99.9 1E-21 2.2E-26 160.7 13.4 139 190-349 14-152 (160)
5 KOG0027 Calmodulin and related 99.9 4.6E-21 9.9E-26 159.9 13.9 141 193-349 5-145 (151)
6 KOG0028 Ca2+-binding protein ( 99.8 4.6E-19 1E-23 141.5 9.4 145 107-264 26-170 (172)
7 PTZ00183 centrin; Provisional 99.8 1.7E-18 3.7E-23 145.5 11.3 146 106-264 9-154 (158)
8 KOG4251 Calcium binding protei 99.8 1.9E-18 4E-23 147.0 10.8 247 112-373 95-362 (362)
9 KOG0028 Ca2+-binding protein ( 99.8 6E-18 1.3E-22 135.1 13.0 138 192-349 29-166 (172)
10 PTZ00184 calmodulin; Provision 99.8 1.8E-18 4E-23 143.7 10.6 144 107-263 4-147 (149)
11 PTZ00183 centrin; Provisional 99.8 7.9E-18 1.7E-22 141.5 14.2 139 191-349 12-150 (158)
12 PTZ00184 calmodulin; Provision 99.8 7.9E-18 1.7E-22 139.9 13.5 138 192-349 7-144 (149)
13 KOG0037 Ca2+-binding protein, 99.8 4.4E-18 9.6E-23 143.4 10.9 153 117-305 56-209 (221)
14 KOG0044 Ca2+ sensor (EF-Hand s 99.7 7.1E-16 1.5E-20 130.8 12.2 138 196-350 26-172 (193)
15 KOG0034 Ca2+/calmodulin-depend 99.6 2.4E-15 5.2E-20 127.6 12.6 137 192-349 29-171 (187)
16 KOG0031 Myosin regulatory ligh 99.6 1.1E-15 2.4E-20 121.3 9.8 134 117-263 31-164 (171)
17 KOG0031 Myosin regulatory ligh 99.6 6.1E-15 1.3E-19 117.1 12.2 134 192-349 28-161 (171)
18 KOG0034 Ca2+/calmodulin-depend 99.6 3.5E-15 7.5E-20 126.6 10.0 145 108-265 27-176 (187)
19 KOG0030 Myosin essential light 99.6 2.8E-15 6E-20 117.0 7.2 139 117-263 10-150 (152)
20 KOG0044 Ca2+ sensor (EF-Hand s 99.6 8E-15 1.7E-19 124.5 9.1 140 119-264 27-175 (193)
21 KOG0037 Ca2+-binding protein, 99.6 5.1E-14 1.1E-18 119.0 13.4 129 197-351 58-186 (221)
22 KOG0030 Myosin essential light 99.6 3.5E-14 7.6E-19 110.9 10.6 140 192-350 7-148 (152)
23 KOG2643 Ca2+ binding protein, 99.5 2E-14 4.4E-19 132.3 7.8 217 96-349 216-449 (489)
24 KOG0036 Predicted mitochondria 99.5 7.9E-14 1.7E-18 127.6 8.7 133 117-264 13-146 (463)
25 KOG4223 Reticulocalbin, calume 99.5 1.4E-13 3.1E-18 122.8 9.3 142 115-264 160-305 (325)
26 KOG0036 Predicted mitochondria 99.5 6.7E-13 1.5E-17 121.6 12.4 132 194-350 12-143 (463)
27 PF13499 EF-hand_7: EF-hand do 99.2 4.5E-11 9.7E-16 84.8 5.6 63 287-349 1-64 (66)
28 PF13499 EF-hand_7: EF-hand do 99.2 6.8E-11 1.5E-15 83.9 5.9 64 198-262 2-66 (66)
29 KOG2562 Protein phosphatase 2 99.1 9.1E-10 2E-14 102.8 13.5 189 114-350 221-421 (493)
30 cd05022 S-100A13 S-100A13: S-1 99.1 2.3E-10 5E-15 85.5 6.3 69 195-267 7-78 (89)
31 KOG0038 Ca2+-binding kinase in 99.1 5.1E-10 1.1E-14 88.3 8.0 97 238-349 73-173 (189)
32 cd05022 S-100A13 S-100A13: S-1 99.1 2.8E-10 6.1E-15 85.1 5.9 68 286-360 8-78 (89)
33 PLN02964 phosphatidylserine de 99.0 1.4E-09 3.1E-14 108.5 11.7 102 194-314 141-243 (644)
34 KOG2643 Ca2+ binding protein, 99.0 8.2E-10 1.8E-14 102.3 8.3 157 164-349 208-380 (489)
35 PLN02964 phosphatidylserine de 99.0 7.8E-10 1.7E-14 110.4 7.2 104 107-225 136-243 (644)
36 KOG0751 Mitochondrial aspartat 99.0 4.6E-09 1E-13 98.4 10.9 204 117-349 32-240 (694)
37 cd05027 S-100B S-100B: S-100B 98.9 2.2E-09 4.7E-14 80.4 6.5 68 286-360 8-82 (88)
38 cd05027 S-100B S-100B: S-100B 98.9 2.6E-09 5.7E-14 79.9 6.5 67 195-265 7-80 (88)
39 KOG0377 Protein serine/threoni 98.9 2.8E-09 6.1E-14 98.6 6.7 145 117-265 463-616 (631)
40 cd05026 S-100Z S-100Z: S-100Z 98.9 6.5E-09 1.4E-13 78.9 6.5 70 286-359 10-83 (93)
41 KOG0377 Protein serine/threoni 98.8 1.1E-08 2.5E-13 94.7 8.6 146 202-354 469-616 (631)
42 KOG4251 Calcium binding protei 98.8 3.6E-09 7.8E-14 90.8 4.7 153 195-351 100-262 (362)
43 cd00052 EH Eps15 homology doma 98.8 7.5E-09 1.6E-13 73.4 5.6 62 289-355 2-63 (67)
44 cd05026 S-100Z S-100Z: S-100Z 98.8 1.4E-08 3E-13 77.1 6.5 70 195-265 9-82 (93)
45 smart00027 EH Eps15 homology d 98.8 7.5E-09 1.6E-13 79.2 4.7 69 107-182 3-71 (96)
46 cd05029 S-100A6 S-100A6: S-100 98.8 1.8E-08 3.9E-13 75.4 6.4 70 286-360 10-82 (88)
47 KOG0038 Ca2+-binding kinase in 98.8 8.8E-09 1.9E-13 81.4 4.8 102 159-265 75-178 (189)
48 cd05025 S-100A1 S-100A1: S-100 98.7 1.7E-08 3.7E-13 76.5 5.6 72 285-360 8-83 (92)
49 cd05029 S-100A6 S-100A6: S-100 98.7 3E-08 6.6E-13 74.2 6.7 67 195-265 9-80 (88)
50 cd05023 S-100A11 S-100A11: S-1 98.7 2.6E-08 5.5E-13 74.7 6.3 71 286-360 9-83 (89)
51 cd05025 S-100A1 S-100A1: S-100 98.7 3.2E-08 6.9E-13 75.0 6.8 70 195-265 8-81 (92)
52 cd05031 S-100A10_like S-100A10 98.7 2.7E-08 5.8E-13 75.8 6.3 69 195-264 7-79 (94)
53 smart00027 EH Eps15 homology d 98.7 3.3E-08 7.1E-13 75.6 6.6 70 192-267 6-75 (96)
54 cd00052 EH Eps15 homology doma 98.7 2.8E-08 6.1E-13 70.4 5.9 59 202-265 4-62 (67)
55 cd05031 S-100A10_like S-100A10 98.7 1.7E-08 3.8E-13 76.8 4.1 66 116-182 6-78 (94)
56 cd00252 SPARC_EC SPARC_EC; ext 98.7 5E-08 1.1E-12 76.6 6.5 57 286-349 48-104 (116)
57 cd00213 S-100 S-100: S-100 dom 98.7 4.7E-08 1E-12 73.4 6.2 72 194-266 6-81 (88)
58 cd05023 S-100A11 S-100A11: S-1 98.7 6.7E-08 1.5E-12 72.4 6.5 71 194-265 7-81 (89)
59 PF13833 EF-hand_8: EF-hand do 98.6 6.2E-08 1.3E-12 65.6 4.8 52 210-264 1-53 (54)
60 cd00252 SPARC_EC SPARC_EC; ext 98.6 1.6E-07 3.5E-12 73.8 6.9 60 195-262 47-106 (116)
61 PF13833 EF-hand_8: EF-hand do 98.6 3.8E-08 8.2E-13 66.6 3.0 50 133-182 2-52 (54)
62 cd00213 S-100 S-100: S-100 dom 98.6 5.9E-08 1.3E-12 72.9 4.1 65 117-182 7-78 (88)
63 cd00051 EFh EF-hand, calcium b 98.5 3.3E-07 7.2E-12 63.1 6.8 59 288-349 2-60 (63)
64 cd00051 EFh EF-hand, calcium b 98.5 2.3E-07 4.9E-12 64.0 5.8 61 198-262 2-62 (63)
65 KOG0041 Predicted Ca2+-binding 98.5 5.8E-07 1.3E-11 75.1 7.3 67 287-360 100-166 (244)
66 PF14658 EF-hand_9: EF-hand do 98.4 9E-07 1.9E-11 61.2 5.2 62 202-265 3-65 (66)
67 cd05030 calgranulins Calgranul 98.3 1.4E-06 3E-11 65.3 6.3 70 195-267 7-82 (88)
68 cd05030 calgranulins Calgranul 98.3 9.9E-07 2.2E-11 66.1 5.5 69 286-360 8-82 (88)
69 KOG2562 Protein phosphatase 2 98.3 4.1E-06 8.9E-11 78.8 10.5 211 122-359 143-381 (493)
70 KOG0040 Ca2+-binding actin-bun 98.3 3.1E-06 6.7E-11 88.8 10.4 136 192-351 2249-2396(2399)
71 KOG0040 Ca2+-binding actin-bun 98.3 2.1E-06 4.6E-11 89.9 8.9 135 117-263 2252-2397(2399)
72 PF00036 EF-hand_1: EF hand; 98.2 1.5E-06 3.3E-11 50.3 3.1 28 288-315 2-29 (29)
73 PF14658 EF-hand_9: EF-hand do 98.2 1.5E-06 3.3E-11 60.1 3.2 60 122-182 2-63 (66)
74 KOG0041 Predicted Ca2+-binding 98.2 6.6E-06 1.4E-10 68.9 7.5 101 193-309 96-198 (244)
75 cd05024 S-100A10 S-100A10: A s 98.0 1.5E-05 3.3E-10 59.2 6.0 70 286-360 8-79 (91)
76 PF00036 EF-hand_1: EF hand; 98.0 5.1E-06 1.1E-10 48.1 2.7 28 120-148 2-29 (29)
77 PF12763 EF-hand_4: Cytoskelet 98.0 1E-05 2.2E-10 62.3 4.3 68 107-182 3-70 (104)
78 KOG0751 Mitochondrial aspartat 97.9 4.2E-05 9E-10 72.5 8.3 196 126-349 82-310 (694)
79 PRK12309 transaldolase/EF-hand 97.9 5E-05 1.1E-09 72.4 8.8 53 281-349 329-381 (391)
80 PF13405 EF-hand_6: EF-hand do 97.9 1.5E-05 3.3E-10 47.0 3.2 29 287-315 1-30 (31)
81 PF13405 EF-hand_6: EF-hand do 97.8 1.6E-05 3.4E-10 46.9 2.7 30 119-149 1-31 (31)
82 cd05024 S-100A10 S-100A10: A s 97.8 5E-05 1.1E-09 56.4 5.9 69 195-265 7-77 (91)
83 PF12763 EF-hand_4: Cytoskelet 97.7 7.8E-05 1.7E-09 57.4 5.8 67 191-264 5-71 (104)
84 PF10591 SPARC_Ca_bdg: Secrete 97.7 1.3E-05 2.8E-10 62.9 1.1 60 285-349 53-112 (113)
85 PF13202 EF-hand_5: EF hand; P 97.7 3.7E-05 8.1E-10 42.8 2.6 23 289-311 2-24 (25)
86 KOG1029 Endocytic adaptor prot 97.6 0.00039 8.5E-09 69.3 10.0 137 202-349 21-253 (1118)
87 PF13202 EF-hand_5: EF hand; P 97.6 4.9E-05 1.1E-09 42.3 2.2 25 120-145 1-25 (25)
88 PF14788 EF-hand_10: EF hand; 97.6 0.00015 3.2E-09 47.3 4.5 49 302-357 1-49 (51)
89 PRK12309 transaldolase/EF-hand 97.6 0.00017 3.6E-09 68.9 6.7 54 196-266 334-387 (391)
90 KOG4666 Predicted phosphate ac 97.5 5.8E-05 1.3E-09 67.9 3.0 117 209-349 239-355 (412)
91 KOG1029 Endocytic adaptor prot 97.5 0.00026 5.7E-09 70.5 6.9 144 108-265 10-258 (1118)
92 PF10591 SPARC_Ca_bdg: Secrete 97.3 0.00017 3.7E-09 56.6 3.0 59 196-260 54-112 (113)
93 KOG0998 Synaptic vesicle prote 97.2 0.00039 8.4E-09 73.0 5.1 225 118-357 11-349 (847)
94 PF14788 EF-hand_10: EF hand; 97.2 0.00039 8.5E-09 45.4 2.8 48 135-182 1-48 (51)
95 KOG0169 Phosphoinositide-speci 97.0 0.0079 1.7E-07 60.7 11.7 141 192-359 132-276 (746)
96 KOG4666 Predicted phosphate ac 97.0 0.0069 1.5E-07 54.9 10.1 124 165-315 237-360 (412)
97 KOG0169 Phosphoinositide-speci 97.0 0.0028 6.2E-08 63.7 8.3 140 115-266 133-276 (746)
98 KOG4065 Uncharacterized conser 96.9 0.0017 3.8E-08 49.6 4.7 60 290-349 71-141 (144)
99 KOG0046 Ca2+-binding actin-bun 96.8 0.0027 5.8E-08 61.1 6.3 63 286-349 19-81 (627)
100 KOG0046 Ca2+-binding actin-bun 96.8 0.0023 5E-08 61.5 5.8 73 191-265 14-86 (627)
101 KOG4065 Uncharacterized conser 96.7 0.0062 1.3E-07 46.6 6.1 66 196-261 66-142 (144)
102 KOG3866 DNA-binding protein of 96.2 0.017 3.7E-07 52.1 7.0 117 86-224 219-353 (442)
103 smart00054 EFh EF-hand, calciu 95.9 0.0097 2.1E-07 33.1 2.9 27 288-314 2-28 (29)
104 smart00054 EFh EF-hand, calciu 95.6 0.01 2.3E-07 32.9 2.2 27 120-147 2-28 (29)
105 KOG1707 Predicted Ras related/ 95.5 0.039 8.5E-07 54.3 7.0 155 191-353 190-377 (625)
106 KOG4578 Uncharacterized conser 95.3 0.013 2.7E-07 53.3 2.8 64 287-352 334-397 (421)
107 KOG1707 Predicted Ras related/ 95.1 0.046 1E-06 53.8 6.0 142 114-262 191-375 (625)
108 PF09279 EF-hand_like: Phospho 94.9 0.038 8.3E-07 40.6 3.9 65 198-265 2-70 (83)
109 PF05042 Caleosin: Caleosin re 94.7 0.095 2E-06 43.7 6.1 103 118-224 7-165 (174)
110 PF09279 EF-hand_like: Phospho 94.7 0.053 1.2E-06 39.8 4.3 67 288-360 2-72 (83)
111 KOG3555 Ca2+-binding proteogly 94.2 0.099 2.1E-06 48.0 5.5 100 198-316 213-312 (434)
112 KOG1955 Ral-GTPase effector RA 93.8 0.088 1.9E-06 50.6 4.7 64 288-356 233-296 (737)
113 PF05042 Caleosin: Caleosin re 92.8 0.79 1.7E-05 38.3 8.1 106 196-312 7-164 (174)
114 KOG3555 Ca2+-binding proteogly 92.8 0.15 3.2E-06 46.9 4.2 54 202-262 255-308 (434)
115 KOG1955 Ral-GTPase effector RA 92.6 0.19 4.1E-06 48.4 4.9 68 192-265 227-294 (737)
116 KOG3866 DNA-binding protein of 92.6 0.15 3.3E-06 46.1 4.0 61 289-349 247-320 (442)
117 KOG4578 Uncharacterized conser 92.0 0.085 1.8E-06 48.1 1.7 63 198-266 335-400 (421)
118 KOG0035 Ca2+-binding actin-bun 90.6 0.63 1.4E-05 48.6 6.5 105 191-310 742-848 (890)
119 KOG4347 GTPase-activating prot 89.0 0.73 1.6E-05 46.1 5.3 61 233-308 552-612 (671)
120 KOG0035 Ca2+-binding actin-bun 89.0 1.3 2.9E-05 46.3 7.4 134 115-262 744-884 (890)
121 KOG0042 Glycerol-3-phosphate d 89.0 0.27 5.8E-06 48.4 2.3 72 107-183 586-657 (680)
122 PF08726 EFhand_Ca_insen: Ca2+ 88.7 0.26 5.7E-06 34.7 1.5 57 284-351 4-67 (69)
123 KOG0998 Synaptic vesicle prote 87.0 0.57 1.2E-05 49.7 3.5 142 118-266 162-347 (847)
124 PLN02952 phosphoinositide phos 86.9 5.5 0.00012 40.5 10.1 91 249-357 13-110 (599)
125 KOG2243 Ca2+ release channel ( 85.9 1.3 2.8E-05 48.0 5.2 61 202-266 4062-4122(5019)
126 KOG2243 Ca2+ release channel ( 84.6 1.4 3.1E-05 47.7 4.8 55 291-349 4062-4116(5019)
127 PF08726 EFhand_Ca_insen: Ca2+ 84.4 0.54 1.2E-05 33.1 1.3 60 195-262 5-67 (69)
128 KOG4004 Matricellular protein 84.3 0.38 8.2E-06 40.8 0.5 57 124-182 193-249 (259)
129 PLN02952 phosphoinositide phos 84.0 2 4.4E-05 43.5 5.6 91 168-264 13-110 (599)
130 PF08976 DUF1880: Domain of un 83.0 0.76 1.7E-05 35.6 1.7 32 321-352 3-34 (118)
131 PF09069 EF-hand_3: EF-hand; 80.1 3.3 7E-05 30.9 4.1 63 117-183 2-75 (90)
132 KOG0042 Glycerol-3-phosphate d 79.4 1.9 4.1E-05 42.7 3.4 71 192-266 589-659 (680)
133 PF05517 p25-alpha: p25-alpha 79.4 6 0.00013 32.8 6.0 64 202-265 7-70 (154)
134 KOG4347 GTPase-activating prot 75.4 4.1 8.8E-05 41.0 4.4 58 286-347 555-612 (671)
135 KOG4004 Matricellular protein 75.1 1.4 3.1E-05 37.4 1.1 66 289-363 190-256 (259)
136 PF05517 p25-alpha: p25-alpha 69.6 13 0.00028 30.7 5.6 62 290-351 6-67 (154)
137 PF02532 PsbI: Photosystem II 66.8 14 0.0003 22.1 3.6 26 3-29 5-30 (36)
138 PF06692 MNSV_P7B: Melon necro 66.5 8.7 0.00019 25.3 3.0 25 5-29 15-39 (61)
139 PF00404 Dockerin_1: Dockerin 65.8 9.1 0.0002 20.1 2.5 17 296-312 1-17 (21)
140 PF15144 DUF4576: Domain of un 63.5 10 0.00022 27.0 3.1 29 1-29 1-29 (88)
141 PF12273 RCR: Chitin synthesis 63.5 2.7 5.8E-05 33.7 0.4 13 5-17 3-15 (130)
142 PF07172 GRP: Glycine rich pro 62.7 7.2 0.00016 29.4 2.5 18 2-19 3-20 (95)
143 PF09069 EF-hand_3: EF-hand; 61.0 33 0.00071 25.6 5.7 65 286-357 3-75 (90)
144 cd07313 terB_like_2 tellurium 60.8 12 0.00027 28.2 3.7 87 210-312 12-98 (104)
145 PHA00003 B internal scaffoldin 54.9 30 0.00065 26.3 4.6 64 47-144 43-109 (120)
146 KOG1264 Phospholipase C [Lipid 53.5 19 0.0004 37.6 4.3 147 115-268 141-297 (1267)
147 PF10717 ODV-E18: Occlusion-de 51.8 23 0.0005 25.7 3.4 20 5-24 30-49 (85)
148 CHL00024 psbI photosystem II p 51.7 16 0.00035 21.8 2.2 26 3-29 5-30 (36)
149 PRK02655 psbI photosystem II r 50.6 17 0.00036 21.9 2.1 26 3-29 5-30 (38)
150 PF08976 DUF1880: Domain of un 50.1 12 0.00026 29.1 1.9 32 232-263 3-34 (118)
151 PF13956 Ibs_toxin: Toxin Ibs, 48.7 10 0.00022 18.9 0.9 8 1-8 1-8 (19)
152 KOG1265 Phospholipase C [Lipid 48.1 2.5E+02 0.0054 30.2 11.2 124 207-357 158-299 (1189)
153 PF14513 DAG_kinase_N: Diacylg 48.0 38 0.00081 27.5 4.6 71 211-299 5-82 (138)
154 cd07313 terB_like_2 tellurium 46.0 14 0.00031 27.9 1.8 82 132-220 12-95 (104)
155 KOG4403 Cell surface glycoprot 45.4 75 0.0016 30.7 6.6 90 209-315 40-130 (575)
156 PF08044 DUF1707: Domain of un 44.8 68 0.0015 21.2 4.6 46 109-161 4-49 (53)
157 COG1314 SecG Preprotein transl 43.8 23 0.00049 26.1 2.5 29 1-29 1-29 (86)
158 PLN02230 phosphoinositide phos 43.4 73 0.0016 32.6 6.8 71 193-265 26-103 (598)
159 PRK09430 djlA Dna-J like membr 41.2 2.2E+02 0.0048 25.9 9.1 48 132-183 68-120 (267)
160 PF15176 LRR19-TM: Leucine-ric 41.1 11 0.00024 28.4 0.5 19 5-23 19-37 (102)
161 KOG1954 Endocytosis/signaling 39.1 35 0.00075 32.5 3.5 57 287-349 445-501 (532)
162 KOG4403 Cell surface glycoprot 37.8 1E+02 0.0023 29.8 6.4 57 167-225 40-96 (575)
163 PF09068 EF-hand_2: EF hand; 37.4 37 0.00081 27.0 3.0 81 234-314 39-125 (127)
164 PLN02230 phosphoinositide phos 36.1 1.5E+02 0.0033 30.4 7.7 70 284-358 27-103 (598)
165 KOG0719 Molecular chaperone (D 35.3 51 0.0011 29.2 3.7 93 58-160 19-114 (264)
166 PLN02222 phosphoinositide phos 34.4 93 0.002 31.7 5.9 68 194-265 23-91 (581)
167 PLN02228 Phosphoinositide phos 33.7 1.4E+02 0.0031 30.3 7.1 69 284-359 22-94 (567)
168 COG4103 Uncharacterized protei 33.7 53 0.0011 26.6 3.2 94 202-313 35-128 (148)
169 PLN02222 phosphoinositide phos 32.5 1.7E+02 0.0037 29.9 7.4 67 285-358 24-91 (581)
170 PLN02228 Phosphoinositide phos 31.2 1.5E+02 0.0032 30.3 6.7 70 192-265 20-93 (567)
171 PF04876 Tenui_NCP: Tenuivirus 31.1 2.6E+02 0.0057 22.8 6.8 62 231-314 78-139 (175)
172 KOG1265 Phospholipase C [Lipid 31.1 2.3E+02 0.0049 30.5 7.9 68 196-264 221-299 (1189)
173 KOG0039 Ferric reductase, NADH 30.5 54 0.0012 34.1 3.6 82 169-263 2-88 (646)
174 PF12174 RST: RCD1-SRO-TAF4 (R 29.8 52 0.0011 23.2 2.4 51 301-357 7-57 (70)
175 PF01307 Plant_vir_prot: Plant 28.8 78 0.0017 24.3 3.4 28 2-29 8-35 (104)
176 PF08414 NADPH_Ox: Respiratory 28.6 85 0.0018 23.8 3.4 56 285-349 29-88 (100)
177 KOG1954 Endocytosis/signaling 28.6 45 0.00098 31.8 2.4 57 119-179 445-501 (532)
178 PF07879 PHB_acc_N: PHB/PHA ac 28.5 1.2E+02 0.0026 20.9 3.9 42 204-245 10-58 (64)
179 KOG2871 Uncharacterized conser 28.5 84 0.0018 29.8 4.1 66 117-183 308-374 (449)
180 PF09068 EF-hand_2: EF hand; 27.7 1.5E+02 0.0032 23.7 4.9 64 286-349 41-121 (127)
181 KOG0039 Ferric reductase, NADH 27.4 78 0.0017 32.9 4.2 79 250-349 2-85 (646)
182 PF14513 DAG_kinase_N: Diacylg 26.8 2.6E+02 0.0056 22.7 6.2 69 251-337 6-81 (138)
183 TIGR01848 PHA_reg_PhaR polyhyd 25.3 3E+02 0.0066 21.2 5.9 52 204-255 10-68 (107)
184 PF08414 NADPH_Ox: Respiratory 24.6 2.3E+02 0.0051 21.5 5.1 61 198-264 32-92 (100)
185 PHA02105 hypothetical protein 24.6 1.1E+02 0.0023 20.6 2.9 50 213-262 4-55 (68)
186 PF14991 MLANA: Protein melan- 24.5 20 0.00044 27.7 -0.5 18 6-23 30-47 (118)
187 PRK14750 kdpF potassium-transp 24.4 1.3E+02 0.0028 17.1 2.8 20 1-20 1-20 (29)
188 PHA02291 hypothetical protein 24.4 70 0.0015 24.4 2.3 21 3-23 4-24 (132)
189 PF11119 DUF2633: Protein of u 23.3 80 0.0017 21.4 2.2 7 1-7 9-15 (59)
190 KOG3449 60S acidic ribosomal p 22.8 3.6E+02 0.0078 20.8 5.9 54 289-350 4-57 (112)
191 PF05984 Cytomega_UL20A: Cytom 22.6 1.1E+02 0.0024 22.2 2.9 11 1-11 1-11 (100)
192 KOG2871 Uncharacterized conser 22.0 97 0.0021 29.4 3.2 64 284-350 307-371 (449)
193 PF03979 Sigma70_r1_1: Sigma-7 21.9 1.2E+02 0.0025 22.0 3.1 45 287-338 8-52 (82)
194 PRK14748 kdpF potassium-transp 21.8 1.6E+02 0.0034 16.7 2.8 16 1-16 1-16 (29)
195 COG3763 Uncharacterized protei 21.3 1.7E+02 0.0036 20.6 3.5 32 133-164 36-67 (71)
196 PLN02223 phosphoinositide phos 20.6 2.3E+02 0.005 28.6 5.8 71 191-264 11-92 (537)
No 1
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.3e-39 Score=287.73 Aligned_cols=269 Identities=37% Similarity=0.562 Sum_probs=230.1
Q ss_pred cccCCCCCCCCCCCCCcchhhhhhhhccCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHH
Q 017306 80 HELSHNHDAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQR 159 (374)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~ 159 (374)
+.+.++|++++| +.+.......|++++ .++++..++.++|.+ ++|+|+..||..|+..........++.+
T Consensus 48 ~~~~~dhe~~~~------d~e~~~~fd~l~~ee---~~~rl~~l~~~iD~~-~Dgfv~~~El~~wi~~s~k~~v~~~~~~ 117 (325)
T KOG4223|consen 48 HNFQYDHEAFLG------DDEFADEFDQLTPEE---SQERLGKLVPKIDSD-SDGFVTESELKAWIMQSQKKYVVEEAAR 117 (325)
T ss_pred CCcCcccccccc------chhhhhhhhhhCcch---hHHHHHHHHhhhcCC-CCCceeHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666 333444446668876 499999999999988 9999999999999999988888899999
Q ss_pred HHHhhcCCCCcceecccccccccccCCC--------CCCcc-cchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCC
Q 017306 160 EMETHDKNKDGFVSFAEYEPPTWVRNSD--------NNSFG-YDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKN 230 (374)
Q Consensus 160 ~~~~~D~d~dG~Is~~EF~~~~~~~~~~--------~~~~~-~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~ 230 (374)
.|..+|.|.||.|+|+||...+...... ..... .-..+.++ .|++.|.|++|.+|++||..+|++...
T Consensus 118 ~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~~~~km~~rDe~-rFk~AD~d~dg~lt~EEF~aFLHPEe~-- 194 (325)
T KOG4223|consen 118 RWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDNEEYKKMIARDEE-RFKAADQDGDGSLTLEEFTAFLHPEEH-- 194 (325)
T ss_pred HHHHhccCccceeeHHHhhhhhhhcccCccccccchhcHHHHHHHHHHHH-HHhhcccCCCCcccHHHHHhccChhhc--
Confidence 9999999999999999999988753211 11111 12233445 999999999999999999999999864
Q ss_pred hhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHH
Q 017306 231 PKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLP 310 (374)
Q Consensus 231 ~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~ 310 (374)
+.+....|..-+...|+|+||+|+++||+.-|+....+ .+.+.+......+.|...|+|+||+|+.+|+++
T Consensus 195 p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~---------~~epeWv~~Ere~F~~~~DknkDG~L~~dEl~~ 265 (325)
T KOG4223|consen 195 PHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGN---------EEEPEWVLTEREQFFEFRDKNKDGKLDGDELLD 265 (325)
T ss_pred chHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCC---------CCCcccccccHHHHHHHhhcCCCCccCHHHHhc
Confidence 89999999999999999999999999999999887652 233778888888889999999999999999999
Q ss_pred HHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhccccCCCCccccccccC
Q 017306 311 IIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSAIFTDEDDDDYIYHDEF 373 (374)
Q Consensus 311 ~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~~~~~~~~~~~~hd~~ 373 (374)
++ .|.+...+..++.+|+...|.|+||+||++|+++||++||++++|+++++..++||||
T Consensus 266 WI---~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~d~FvgSqAtdyge~L~~~HDEl 325 (325)
T KOG4223|consen 266 WI---LPSEQDHAKAEARHLLHEADEDKDGKLSKEEILEHYDVFVGSQATDYGEDLDYFHDEL 325 (325)
T ss_pred cc---CCCCccHHHHHHHHHhhhhccCccccccHHHHhhCcceeeeeecccchhhcccccCCC
Confidence 98 7888889999999999999999999999999999999999999999999888889997
No 2
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.89 E-value=5.5e-23 Score=168.10 Aligned_cols=145 Identities=23% Similarity=0.297 Sum_probs=133.8
Q ss_pred ccCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccC
Q 017306 106 DYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRN 185 (374)
Q Consensus 106 ~~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 185 (374)
..+++++ .++++++|..+|+| ++|.|+..||..+++.+|..++...+.++|..+|. +.|.|+|.+|+.++....
T Consensus 12 ~~~t~~q----i~~lkeaF~l~D~d-~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~ 85 (160)
T COG5126 12 TQLTEEQ----IQELKEAFQLFDRD-SDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKL 85 (160)
T ss_pred ccCCHHH----HHHHHHHHHHhCcC-CCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHh
Confidence 5788887 78999999999999 99999999999999999999999999999999999 999999999999997644
Q ss_pred CCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 186 SDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 186 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
. .....+.++. +|+.||.|++|+|+..||+.++..++ ..+++++++.+++.+|.|++|.|+|++|...+..
T Consensus 86 ~----~~~~~Eel~~-aF~~fD~d~dG~Is~~eL~~vl~~lg---e~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 86 K----RGDKEEELRE-AFKLFDKDHDGYISIGELRRVLKSLG---ERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred c----cCCcHHHHHH-HHHHhCCCCCceecHHHHHHHHHhhc---ccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 3 3555788998 99999999999999999999999988 6899999999999999999999999999996643
No 3
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.88 E-value=2.1e-22 Score=167.98 Aligned_cols=143 Identities=27% Similarity=0.314 Sum_probs=127.7
Q ss_pred HHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccCCCCCCcccchh
Q 017306 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMG 196 (374)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~ 196 (374)
...++.+|..+|++ ++|+|+..||..+++.++..++..++..++..+|.+++|.|++.||+.++..............+
T Consensus 7 ~~el~~~F~~fD~d-~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~ 85 (151)
T KOG0027|consen 7 ILELKEAFQLFDKD-GDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSE 85 (151)
T ss_pred HHHHHHHHHHHCCC-CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHH
Confidence 67889999999999 99999999999999999999999999999999999999999999999988754432111112345
Q ss_pred HHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 197 WWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 197 ~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
.+++ +|+.||.|++|+||..||+.+|..++ .+.+.++++.+++.+|.|+||.|+|.||+.++..
T Consensus 86 el~e-aF~~fD~d~~G~Is~~el~~~l~~lg---~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~ 149 (151)
T KOG0027|consen 86 ELKE-AFRVFDKDGDGFISASELKKVLTSLG---EKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSG 149 (151)
T ss_pred HHHH-HHHHHccCCCCcCcHHHHHHHHHHhC---CcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhc
Confidence 7898 99999999999999999999999998 5788999999999999999999999999997753
No 4
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.87 E-value=1e-21 Score=160.67 Aligned_cols=139 Identities=24% Similarity=0.324 Sum_probs=126.2
Q ss_pred CcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhcc
Q 017306 190 SFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNY 269 (374)
Q Consensus 190 ~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~ 269 (374)
....+.+.|++ +|..+|.|++|.|+..+|..+++.++. ..+..++..++..+|. +.|.|+|.+|+.+|.....
T Consensus 14 ~t~~qi~~lke-aF~l~D~d~~G~I~~~el~~ilr~lg~---~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~-- 86 (160)
T COG5126 14 LTEEQIQELKE-AFQLFDRDSDGLIDRNELGKILRSLGF---NPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLK-- 86 (160)
T ss_pred CCHHHHHHHHH-HHHHhCcCCCCCCcHHHHHHHHHHcCC---CCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhc--
Confidence 34566788999 999999999999999999999998874 6788999999999999 9999999999999988775
Q ss_pred CcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 270 DDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
.....++++++|+.||+|++|+|+..||..+++.++ ..+++++++.+++.+|.|+||.|+|++|++
T Consensus 87 -----------~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lg---e~~~deev~~ll~~~d~d~dG~i~~~eF~~ 152 (160)
T COG5126 87 -----------RGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLG---ERLSDEEVEKLLKEYDEDGDGEIDYEEFKK 152 (160)
T ss_pred -----------cCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhc---ccCCHHHHHHHHHhcCCCCCceEeHHHHHH
Confidence 245568999999999999999999999999999884 237899999999999999999999999998
No 5
>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.86 E-value=4.6e-21 Score=159.90 Aligned_cols=141 Identities=27% Similarity=0.449 Sum_probs=123.3
Q ss_pred cchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcC
Q 017306 193 YDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDE 272 (374)
Q Consensus 193 ~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~ 272 (374)
.....++. +|..||.+++|+|+..||..+++.++ ..++..++..++..+|.+++|.|++.||+.++..........
T Consensus 5 ~~~~el~~-~F~~fD~d~~G~i~~~el~~~lr~lg---~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~ 80 (151)
T KOG0027|consen 5 EQILELKE-AFQLFDKDGDGKISVEELGAVLRSLG---QNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE 80 (151)
T ss_pred HHHHHHHH-HHHHHCCCCCCcccHHHHHHHHHHcC---CCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence 34566888 99999999999999999999999998 468899999999999999999999999999887765531110
Q ss_pred CCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 273 GHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
......++++|+.||+|++|+||..||+.+|..++.. .+.++++.+++.+|.|+||.|+|.||+.
T Consensus 81 ---------~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~---~~~~e~~~mi~~~d~d~dg~i~f~ef~~ 145 (151)
T KOG0027|consen 81 ---------EASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEK---LTDEECKEMIREVDVDGDGKVNFEEFVK 145 (151)
T ss_pred ---------cccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCc---CCHHHHHHHHHhcCCCCCCeEeHHHHHH
Confidence 0234589999999999999999999999999999633 6799999999999999999999999998
No 6
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.79 E-value=4.6e-19 Score=141.48 Aligned_cols=145 Identities=20% Similarity=0.190 Sum_probs=131.3
Q ss_pred cCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccCC
Q 017306 107 YLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNS 186 (374)
Q Consensus 107 ~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~ 186 (374)
.+++++ ++.++..|..+|.+ ++|+|+.+||..+++++|..+...++.+++..+|+++.|.|+|++|...+.....
T Consensus 26 ~l~~~q----~q~i~e~f~lfd~~-~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~ 100 (172)
T KOG0028|consen 26 ELTEEQ----KQEIKEAFELFDPD-MAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLG 100 (172)
T ss_pred cccHHH----HhhHHHHHHhhccC-CCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHh
Confidence 355655 67888999999999 9999999999999999999999999999999999999999999999998765443
Q ss_pred CCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 187 DNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 187 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
.....+.++. +|+.+|.|++|.||..+|+.+...+| +.++++++..++.++|.+++|.|+-+||...+..
T Consensus 101 ----e~dt~eEi~~-afrl~D~D~~Gkis~~~lkrvakeLg---enltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 101 ----ERDTKEEIKK-AFRLFDDDKTGKISQRNLKRVAKELG---ENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred ----ccCcHHHHHH-HHHcccccCCCCcCHHHHHHHHHHhC---ccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 2336778888 99999999999999999999999998 7899999999999999999999999999987643
No 7
>PTZ00183 centrin; Provisional
Probab=99.78 E-value=1.7e-18 Score=145.53 Aligned_cols=146 Identities=16% Similarity=0.173 Sum_probs=125.5
Q ss_pred ccCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccC
Q 017306 106 DYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRN 185 (374)
Q Consensus 106 ~~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~ 185 (374)
..+++++ ..++..+|..+|.+ ++|.|+..||..++..++...+...+..+|..+|.+++|.|+|.||+..+....
T Consensus 9 ~~~~~~~----~~~~~~~F~~~D~~-~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~ 83 (158)
T PTZ00183 9 PGLTEDQ----KKEIREAFDLFDTD-GSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKL 83 (158)
T ss_pred CCCCHHH----HHHHHHHHHHhCCC-CCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHh
Confidence 3456665 67889999999999 999999999999999998877888899999999999999999999998765322
Q ss_pred CCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 186 SDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 186 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
. .......++. +|+.+|.+++|.|+.+||..++...+ ..++...+..++..+|.+++|.|+|++|...+..
T Consensus 84 ~----~~~~~~~l~~-~F~~~D~~~~G~i~~~e~~~~l~~~~---~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 84 G----ERDPREEILK-AFRLFDDDKTGKISLKNLKRVAKELG---ETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred c----CCCcHHHHHH-HHHHhCCCCCCcCcHHHHHHHHHHhC---CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 1 1223456777 99999999999999999999998776 5688899999999999999999999999987643
No 8
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=99.77 E-value=1.9e-18 Score=147.01 Aligned_cols=247 Identities=23% Similarity=0.367 Sum_probs=175.8
Q ss_pred hhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhch---hhhHHHHHHHHHhhcCCCCcceecccccccccccCCCC
Q 017306 112 EKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAE---RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDN 188 (374)
Q Consensus 112 ~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~---~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~ 188 (374)
+.+...+.|..+|.+.|.| .||+||..|+++|+..-.. ....++.+..|+.+|+|+||.|+|+||..-+.......
T Consensus 95 eprrsrrklmviFsKvDVN-tDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghs 173 (362)
T KOG4251|consen 95 EPRRSRRKLMVIFSKVDVN-TDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHS 173 (362)
T ss_pred chhHHHHHHHHHHhhcccC-ccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcc
Confidence 3446788999999999999 8999999999999887532 23345556679999999999999999998775443321
Q ss_pred CC---------cccchhHHHHHhhhhcCCCCCCCccH---------HHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCC
Q 017306 189 NS---------FGYDMGWWKEEHFNASDADGDGLLNL---------TEFNDFLHPADTKNPKLILWLSKEEVRERDSDRD 250 (374)
Q Consensus 189 ~~---------~~~~~~~~~~~~F~~~D~d~dG~Is~---------~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~d 250 (374)
.. .......-.+ .|..-+++..|..+. +||..+|++..+ ..+....++.+++.+|.|+|
T Consensus 174 ekevadairlneelkVDeEtq-evlenlkdRwyqaDsppadlllteeEflsFLHPEhS--rgmLrfmVkeivrdlDqdgD 250 (362)
T KOG4251|consen 174 EKEVADAIRLNEELKVDEETQ-EVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHS--RGMLRFMVKEIVRDLDQDGD 250 (362)
T ss_pred hHHHHHHhhccCcccccHHHH-HHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhh--hhhHHHHHHHHHHHhccCCC
Confidence 00 0001111122 555556666665554 999999997643 45677789999999999999
Q ss_pred CcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHH
Q 017306 251 GKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYI 330 (374)
Q Consensus 251 G~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l 330 (374)
..++..||+......+.+...+. ....+.....+..=..+|.|.||..+..|+..++ .|.....+-.++..+
T Consensus 251 kqlSvpeFislpvGTVenqqgqd-----iddnwvkdRkkEFeElIDsNhDGivTaeELe~y~---dP~n~~~alne~~~~ 322 (362)
T KOG4251|consen 251 KQLSVPEFISLPVGTVENQQGQD-----IDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYV---DPQNFRLALNEVNDI 322 (362)
T ss_pred eeecchhhhcCCCcchhhhhccc-----hHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhc---CchhhhhhHHHHHHH
Confidence 99999999986655554322111 1122233344443456899999999999999887 444566788899999
Q ss_pred HHHccCCCCCcccHHHHhcCccchhhccccCCCCccccccccC
Q 017306 331 ISQADTDKDGRLTLLEMIENPYVFYSAIFTDEDDDDYIYHDEF 373 (374)
Q Consensus 331 ~~~~D~n~dG~Is~~EFl~~~~~f~~~~~~~~~~~~~~~hd~~ 373 (374)
+...|.|++.+++.+|.++.-..+-++...+ -..+.|||+
T Consensus 323 ma~~d~n~~~~Ls~eell~r~~~~~rSsLls---arsSlHdEm 362 (362)
T KOG4251|consen 323 MALTDANNDEKLSLEELLERDWLLARSSLLS---ARSSLHDEM 362 (362)
T ss_pred HhhhccCCCcccCHHHHHHHHhhhcccHHHH---HHHhhhhcC
Confidence 9999999999999999998444444443332 245678875
No 9
>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=6e-18 Score=135.13 Aligned_cols=138 Identities=20% Similarity=0.243 Sum_probs=125.7
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCc
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDD 271 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~ 271 (374)
..+...++. +|..||.+++|+|...||+-+++..|. .....++..++..+|+++.|.|+|++|...+...+.
T Consensus 29 ~~q~q~i~e-~f~lfd~~~~g~iD~~EL~vAmralGF---E~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~---- 100 (172)
T KOG0028|consen 29 EEQKQEIKE-AFELFDPDMAGKIDVEELKVAMRALGF---EPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLG---- 100 (172)
T ss_pred HHHHhhHHH-HHHhhccCCCCcccHHHHHHHHHHcCC---CcchHHHHHHHHhhhhccCceechHHHHHHHHHHHh----
Confidence 344467888 999999999999999999999999984 778889999999999999999999999998888766
Q ss_pred CCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 272 EGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
.....+.++.+|+.+|.|++|.||..+|+.+.+.|++. ++++++..++.++|.++||.|+.+||+.
T Consensus 101 ---------e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgen---ltD~El~eMIeEAd~d~dgevneeEF~~ 166 (172)
T KOG0028|consen 101 ---------ERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGEN---LTDEELMEMIEEADRDGDGEVNEEEFIR 166 (172)
T ss_pred ---------ccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCcc---ccHHHHHHHHHHhcccccccccHHHHHH
Confidence 24477899999999999999999999999999999654 8999999999999999999999999987
No 10
>PTZ00184 calmodulin; Provisional
Probab=99.77 E-value=1.8e-18 Score=143.69 Aligned_cols=144 Identities=24% Similarity=0.315 Sum_probs=124.0
Q ss_pred cCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccCC
Q 017306 107 YLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNS 186 (374)
Q Consensus 107 ~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~ 186 (374)
.+++++ .+.++..|..+|.+ ++|.|+..||..++..++..+....+..+|+.+|.+++|.|+|+||+..+.....
T Consensus 4 ~~~~~~----~~~~~~~F~~~D~~-~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~ 78 (149)
T PTZ00184 4 QLTEEQ----IAEFKEAFSLFDKD-GDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMK 78 (149)
T ss_pred ccCHHH----HHHHHHHHHHHcCC-CCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhcc
Confidence 456665 67889999999999 9999999999999999888788889999999999999999999999988764321
Q ss_pred CCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 017306 187 DNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLF 263 (374)
Q Consensus 187 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~ 263 (374)
.......++. +|+.+|.+++|.|+.+||..++...+ +.++...+..++..+|.+++|.|+|+||+..+.
T Consensus 79 ----~~~~~~~~~~-~F~~~D~~~~g~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 79 ----DTDSEEEIKE-AFKVFDRDGNGFISAAELRHVMTNLG---EKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred ----CCcHHHHHHH-HHHhhCCCCCCeEeHHHHHHHHHHHC---CCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 1122355777 99999999999999999999998765 567888999999999999999999999998664
No 11
>PTZ00183 centrin; Provisional
Probab=99.77 E-value=7.9e-18 Score=141.47 Aligned_cols=139 Identities=20% Similarity=0.272 Sum_probs=120.1
Q ss_pred cccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccC
Q 017306 191 FGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYD 270 (374)
Q Consensus 191 ~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~ 270 (374)
......+++. +|..+|.+++|.|+..||..++...+. .+....+..++..+|.+++|.|+|.||+..+.....
T Consensus 12 ~~~~~~~~~~-~F~~~D~~~~G~i~~~e~~~~l~~~g~---~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~--- 84 (158)
T PTZ00183 12 TEDQKKEIRE-AFDLFDTDGSGTIDPKELKVAMRSLGF---EPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLG--- 84 (158)
T ss_pred CHHHHHHHHH-HHHHhCCCCCCcccHHHHHHHHHHhCC---CCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhc---
Confidence 3455677887 999999999999999999999987763 456778999999999999999999999997765433
Q ss_pred cCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 271 DEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
.......++.+|+.+|++++|.|+..||..++..+++. ++..++..+|..+|.|++|.|+++||+.
T Consensus 85 ----------~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~---l~~~~~~~~~~~~d~~~~g~i~~~ef~~ 150 (158)
T PTZ00183 85 ----------ERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGET---ITDEELQEMIDEADRNGDGEISEEEFYR 150 (158)
T ss_pred ----------CCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC---CCHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence 12334678999999999999999999999999888533 7889999999999999999999999988
No 12
>PTZ00184 calmodulin; Provisional
Probab=99.76 E-value=7.9e-18 Score=139.85 Aligned_cols=138 Identities=24% Similarity=0.458 Sum_probs=118.1
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCc
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDD 271 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~ 271 (374)
....+.++. .|..+|.+++|.|+.+||..++...+ .......+..+++.+|.+++|.|+|++|+.++......
T Consensus 7 ~~~~~~~~~-~F~~~D~~~~G~i~~~e~~~~l~~~~---~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~--- 79 (149)
T PTZ00184 7 EEQIAEFKE-AFSLFDKDGDGTITTKELGTVMRSLG---QNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKD--- 79 (149)
T ss_pred HHHHHHHHH-HHHHHcCCCCCcCCHHHHHHHHHHhC---CCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccC---
Confidence 344566777 99999999999999999999998765 34556789999999999999999999999987765431
Q ss_pred CCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 272 EGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
......+..+|+.+|.+++|.|+..|+..++..+++. .+...+..++..+|.|++|.|+|+||+.
T Consensus 80 ----------~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~---~~~~~~~~~~~~~d~~~~g~i~~~ef~~ 144 (149)
T PTZ00184 80 ----------TDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEK---LTDEEVDEMIREADVDGDGQINYEEFVK 144 (149)
T ss_pred ----------CcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCC---CCHHHHHHHHHhcCCCCCCcCcHHHHHH
Confidence 2233578899999999999999999999999888543 6788999999999999999999999987
No 13
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.76 E-value=4.4e-18 Score=143.37 Aligned_cols=153 Identities=19% Similarity=0.279 Sum_probs=135.6
Q ss_pred HHHHHhhhcccCCCCCCCcccHHHHHHHHHHh-chhhhHHHHHHHHHhhcCCCCcceecccccccccccCCCCCCcccch
Q 017306 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQ-AERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDM 195 (374)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~-~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~ 195 (374)
-..+...|...|+| +.|.|+.+||..+|... ....+.+.+..++..+|.+.+|+|.+.||..++.. +
T Consensus 56 ~~~~~~~f~~vD~d-~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~-----------i 123 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRD-RSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKY-----------I 123 (221)
T ss_pred cHHHHHHHHhhCcc-ccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHH-----------H
Confidence 34677999999999 99999999999998854 34556788899999999999999999999998764 5
Q ss_pred hHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCC
Q 017306 196 GWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHN 275 (374)
Q Consensus 196 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~ 275 (374)
..|+. +|+.+|+|++|.|+..||+++|..+|+ .++.+..+.+++.+|.-+.|.|.|++|+.++...
T Consensus 124 ~~Wr~-vF~~~D~D~SG~I~~sEL~~Al~~~Gy---~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L---------- 189 (221)
T KOG0037|consen 124 NQWRN-VFRTYDRDRSGTIDSSELRQALTQLGY---RLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL---------- 189 (221)
T ss_pred HHHHH-HHHhcccCCCCcccHHHHHHHHHHcCc---CCCHHHHHHHHHHhccccCCceeHHHHHHHHHHH----------
Confidence 67998 999999999999999999999999995 7889999999999998889999999999977654
Q ss_pred CCCCCCCCCchHHHHHhhhhccCCCCccCH
Q 017306 276 SSHPSDDTMDAPARQLFGQLDKDGDGYLSD 305 (374)
Q Consensus 276 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~ 305 (374)
..+.++|+..|++.+|.|+.
T Consensus 190 ----------~~lt~~Fr~~D~~q~G~i~~ 209 (221)
T KOG0037|consen 190 ----------QRLTEAFRRRDTAQQGSITI 209 (221)
T ss_pred ----------HHHHHHHHHhccccceeEEE
Confidence 25789999999999998754
No 14
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.67 E-value=7.1e-16 Score=130.85 Aligned_cols=138 Identities=28% Similarity=0.393 Sum_probs=111.4
Q ss_pred hHHHHHhhhhcCC-CCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCC
Q 017306 196 GWWKEEHFNASDA-DGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGH 274 (374)
Q Consensus 196 ~~~~~~~F~~~D~-d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~ 274 (374)
.+++. .++.|=. ..+|.++.++|+.++..... ..-+...++.+|+.+|.|++|.|+|.||+..+....+
T Consensus 26 ~ei~~-~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp--~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~r------- 95 (193)
T KOG0044|consen 26 KEIQQ-WYRGFKNECPSGRLTLEEFREIYASFFP--DGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSR------- 95 (193)
T ss_pred HHHHH-HHHHhcccCCCCccCHHHHHHHHHHHCC--CCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcC-------
Confidence 33444 4444433 45999999999999987652 2345667889999999999999999999999888766
Q ss_pred CCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhC---C-----CcccchHHHHHHHHHHccCCCCCcccHHH
Q 017306 275 NSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLH---P-----SERYYAKQQADYIISQADTDKDGRLTLLE 346 (374)
Q Consensus 275 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~---~-----~~~~~~~~~~~~l~~~~D~n~dG~Is~~E 346 (374)
+...+.++.+|+.+|.||+|+|+..|+..++..+. + .......+.++.+|+.+|.|+||.||++|
T Consensus 96 -------Gt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~ee 168 (193)
T KOG0044|consen 96 -------GTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEE 168 (193)
T ss_pred -------CcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHH
Confidence 56667889999999999999999999999888542 1 12233567799999999999999999999
Q ss_pred HhcC
Q 017306 347 MIEN 350 (374)
Q Consensus 347 Fl~~ 350 (374)
|++.
T Consensus 169 f~~~ 172 (193)
T KOG0044|consen 169 FIEG 172 (193)
T ss_pred HHHH
Confidence 9983
No 15
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.64 E-value=2.4e-15 Score=127.63 Aligned_cols=137 Identities=28% Similarity=0.392 Sum_probs=112.2
Q ss_pred ccchhHHHHHhhhhcCCC-CCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCc-ccHHHHHHHHHhhhhcc
Q 017306 192 GYDMGWWKEEHFNASDAD-GDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGK-VNFKEFFHGLFDLVRNY 269 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d-~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~-Is~~EF~~~l~~~~~~~ 269 (374)
..+++.+.. .|..+|.+ ++|.|+.+||..+.... ......+++..++.+++|. |+|++|+..+.....
T Consensus 29 ~~EI~~L~~-rF~kl~~~~~~g~lt~eef~~i~~~~-------~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~-- 98 (187)
T KOG0034|consen 29 ANEIERLYE-RFKKLDRNNGDGYLTKEEFLSIPELA-------LNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSP-- 98 (187)
T ss_pred HHHHHHHHH-HHHHhccccccCccCHHHHHHHHHHh-------cCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcC--
Confidence 345677777 99999999 99999999999988321 2224678999999998888 999999998877654
Q ss_pred CcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcc----cchHHHHHHHHHHccCCCCCcccHH
Q 017306 270 DDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSER----YYAKQQADYIISQADTDKDGRLTLL 345 (374)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~----~~~~~~~~~l~~~~D~n~dG~Is~~ 345 (374)
......+++-+|+.||.+++|+|+++|+.+++..+..... ..-.+.++.+|.++|.++||+|+++
T Consensus 99 -----------~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~Isfe 167 (187)
T KOG0034|consen 99 -----------KASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFE 167 (187)
T ss_pred -----------CccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHH
Confidence 2334468999999999999999999999999998753221 1223458999999999999999999
Q ss_pred HHhc
Q 017306 346 EMIE 349 (374)
Q Consensus 346 EFl~ 349 (374)
||.+
T Consensus 168 Ef~~ 171 (187)
T KOG0034|consen 168 EFCK 171 (187)
T ss_pred HHHH
Confidence 9999
No 16
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.64 E-value=1.1e-15 Score=121.25 Aligned_cols=134 Identities=17% Similarity=0.203 Sum_probs=120.8
Q ss_pred HHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccCCCCCCcccchh
Q 017306 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMG 196 (374)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~ 196 (374)
.++++++|..+|.| +||.|+.++|+..+.++|...+.+++..+++. .+|.|+|.-|+.++..... ...+.+
T Consensus 31 IqEfKEAF~~mDqn-rDG~IdkeDL~d~~aSlGk~~~d~elDaM~~E----a~gPINft~FLTmfGekL~----gtdpe~ 101 (171)
T KOG0031|consen 31 IQEFKEAFNLMDQN-RDGFIDKEDLRDMLASLGKIASDEELDAMMKE----APGPINFTVFLTMFGEKLN----GTDPEE 101 (171)
T ss_pred HHHHHHHHHHHhcc-CCCcccHHHHHHHHHHcCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHHhc----CCCHHH
Confidence 78999999999999 99999999999999999999999999999986 4789999999998864433 234456
Q ss_pred HHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 017306 197 WWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLF 263 (374)
Q Consensus 197 ~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~ 263 (374)
.+.. +|+.||.+++|.|..+.|+++|...+ ..+++++++.+++.+-.+..|.|+|.+|+..+.
T Consensus 102 ~I~~-AF~~FD~~~~G~I~~d~lre~Ltt~g---Dr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 102 VILN-AFKTFDDEGSGKIDEDYLRELLTTMG---DRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred HHHH-HHHhcCccCCCccCHHHHHHHHHHhc---ccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 6777 99999999999999999999999988 789999999999999999999999999999775
No 17
>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.62 E-value=6.1e-15 Score=117.09 Aligned_cols=134 Identities=18% Similarity=0.298 Sum_probs=120.0
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCc
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDD 271 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~ 271 (374)
..++.++++ +|..+|.|+||.|.+++|+.++.++|. ..++++++.|+++. .|-|+|--|+.++...+.
T Consensus 28 q~QIqEfKE-AF~~mDqnrDG~IdkeDL~d~~aSlGk---~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~---- 95 (171)
T KOG0031|consen 28 QSQIQEFKE-AFNLMDQNRDGFIDKEDLRDMLASLGK---IASDEELDAMMKEA----PGPINFTVFLTMFGEKLN---- 95 (171)
T ss_pred HHHHHHHHH-HHHHHhccCCCcccHHHHHHHHHHcCC---CCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhc----
Confidence 456788998 999999999999999999999999984 58889999999875 578999999998888776
Q ss_pred CCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 272 EGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
....++.+..+|+.||.+++|.|..+.|+.+|...+ + ..++++|+.+++.+=.+..|.++|.+|+.
T Consensus 96 ---------gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~g--D-r~~~eEV~~m~r~~p~d~~G~~dy~~~~~ 161 (171)
T KOG0031|consen 96 ---------GTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMG--D-RFTDEEVDEMYREAPIDKKGNFDYKAFTY 161 (171)
T ss_pred ---------CCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhc--c-cCCHHHHHHHHHhCCcccCCceeHHHHHH
Confidence 355578899999999999999999999999999884 3 37999999999999999999999999988
No 18
>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]
Probab=99.61 E-value=3.5e-15 Score=126.65 Aligned_cols=145 Identities=26% Similarity=0.359 Sum_probs=116.0
Q ss_pred CChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcc-eecccccccccccCC
Q 017306 108 LNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGF-VSFAEYEPPTWVRNS 186 (374)
Q Consensus 108 l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~-Is~~EF~~~~~~~~~ 186 (374)
++..+ ..+|...|.++|.+-++|.|+.+||..+.. +..+ ....+++..++.+++|. |+|++|+..+.....
T Consensus 27 fs~~E----I~~L~~rF~kl~~~~~~g~lt~eef~~i~~-~~~N---p~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~ 98 (187)
T KOG0034|consen 27 FSANE----IERLYERFKKLDRNNGDGYLTKEEFLSIPE-LALN---PLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSP 98 (187)
T ss_pred cCHHH----HHHHHHHHHHhccccccCccCHHHHHHHHH-HhcC---cHHHHHHHHHhccCCCCccCHHHHHHHHhhhcC
Confidence 56655 678999999999952589999999999873 3222 34577789999999888 999999999886654
Q ss_pred CCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCC----hhhhHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 017306 187 DNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKN----PKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262 (374)
Q Consensus 187 ~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~----~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l 262 (374)
.....++++- +|+.||.+++|+|+.+|+.+++..+.+.+ .......++.+|.++|.++||+|+|+||...+
T Consensus 99 ----~~~~~~Kl~f-aF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v 173 (187)
T KOG0034|consen 99 ----KASKREKLRF-AFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVV 173 (187)
T ss_pred ----CccHHHHHHH-HHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 1223357888 99999999999999999999988664321 34556778889999999999999999999977
Q ss_pred Hhh
Q 017306 263 FDL 265 (374)
Q Consensus 263 ~~~ 265 (374)
...
T Consensus 174 ~~~ 176 (187)
T KOG0034|consen 174 EKQ 176 (187)
T ss_pred HcC
Confidence 653
No 19
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.59 E-value=2.8e-15 Score=117.04 Aligned_cols=139 Identities=17% Similarity=0.197 Sum_probs=121.8
Q ss_pred HHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCC--CCcceecccccccccccCCCCCCcccc
Q 017306 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKN--KDGFVSFAEYEPPTWVRNSDNNSFGYD 194 (374)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d--~dG~Is~~EF~~~~~~~~~~~~~~~~~ 194 (374)
..+++++|..||.. +||.|+..+...+|+.+|.+++..++.+.....+.+ +-.+|+|++|+.++..... +.....
T Consensus 10 ~~e~ke~F~lfD~~-gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vak--nk~q~t 86 (152)
T KOG0030|consen 10 MEEFKEAFLLFDRT-GDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAK--NKDQGT 86 (152)
T ss_pred HHHHHHHHHHHhcc-CcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHh--ccccCc
Confidence 68899999999999 999999999999999999999999999999888877 5578999999998865433 234555
Q ss_pred hhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 017306 195 MGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLF 263 (374)
Q Consensus 195 ~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~ 263 (374)
.+.+-+ -++.||++++|.|...||+.+|..+| ..+++.+++.++.-.- |++|.|+|+.|++.+.
T Consensus 87 ~edfve-gLrvFDkeg~G~i~~aeLRhvLttlG---ekl~eeEVe~Llag~e-D~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 87 YEDFVE-GLRVFDKEGNGTIMGAELRHVLTTLG---EKLTEEEVEELLAGQE-DSNGCINYEAFVKHIM 150 (152)
T ss_pred HHHHHH-HHHhhcccCCcceeHHHHHHHHHHHH---hhccHHHHHHHHcccc-ccCCcCcHHHHHHHHh
Confidence 677777 89999999999999999999999998 7999999999987653 6789999999998764
No 20
>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]
Probab=99.57 E-value=8e-15 Score=124.46 Aligned_cols=140 Identities=20% Similarity=0.259 Sum_probs=109.7
Q ss_pred HHHhhhcccCCCCCCCcccHHHHHHHHHHhch-hhhHHHHHHHHHhhcCCCCcceecccccccccccCCCCCCcccchhH
Q 017306 119 RLVLLFPKIDVNPADGYINEDELTDWNMQQAE-RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGW 197 (374)
Q Consensus 119 ~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~-~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~ 197 (374)
.++..++.|=.++.+|.++.++|+.++..... ..+..-...+|+.+|.|+||.|+|.||+..+..... +...+.
T Consensus 27 ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~r-----Gt~eek 101 (193)
T KOG0044|consen 27 EIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSR-----GTLEEK 101 (193)
T ss_pred HHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcC-----CcHHHH
Confidence 33444444444434899999999999999875 444566788899999999999999999988874433 555666
Q ss_pred HHHHhhhhcCCCCCCCccHHHHHHhhccC----CC----CChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 198 WKEEHFNASDADGDGLLNLTEFNDFLHPA----DT----KNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 198 ~~~~~F~~~D~d~dG~Is~~E~~~~l~~~----~~----~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
++- +|++||.||+|+|+.+|+..++... +. .........++.+|+.+|.|+||.||++||...+..
T Consensus 102 l~w-~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~ 175 (193)
T KOG0044|consen 102 LKW-AFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKA 175 (193)
T ss_pred hhh-hheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhh
Confidence 777 9999999999999999999877533 21 123445677899999999999999999999986643
No 21
>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.57 E-value=5.1e-14 Score=118.96 Aligned_cols=129 Identities=21% Similarity=0.303 Sum_probs=114.3
Q ss_pred HHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCC
Q 017306 197 WWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNS 276 (374)
Q Consensus 197 ~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~ 276 (374)
.+.. .|...|.|++|.|+.+|+.++|..... .....+.|.-|+..+|.+.+|+|.+.||.. |+..++
T Consensus 58 ~~~~-~f~~vD~d~sg~i~~~eLq~aLsn~~~--~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~-Lw~~i~--------- 124 (221)
T KOG0037|consen 58 QLAG-WFQSVDRDRSGRILAKELQQALSNGTW--SPFSIETCRLMISMFDRDNSGTIGFKEFKA-LWKYIN--------- 124 (221)
T ss_pred HHHH-HHHhhCccccccccHHHHHHHhhcCCC--CCCCHHHHHHHHHHhcCCCCCccCHHHHHH-HHHHHH---------
Confidence 4555 999999999999999999999985433 567788899999999999999999999998 666555
Q ss_pred CCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCc
Q 017306 277 SHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENP 351 (374)
Q Consensus 277 ~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~ 351 (374)
..+.+|+.+|+|++|.|+..||++.|..+| ..++++..+.|++.+|.-++|.|.+++|++..
T Consensus 125 ----------~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~G---y~Lspq~~~~lv~kyd~~~~g~i~FD~FI~cc 186 (221)
T KOG0037|consen 125 ----------QWRNVFRTYDRDRSGTIDSSELRQALTQLG---YRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCC 186 (221)
T ss_pred ----------HHHHHHHhcccCCCCcccHHHHHHHHHHcC---cCCCHHHHHHHHHHhccccCCceeHHHHHHHH
Confidence 678999999999999999999999999995 34899999999999998889999999999943
No 22
>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]
Probab=99.56 E-value=3.5e-14 Score=110.91 Aligned_cols=140 Identities=18% Similarity=0.281 Sum_probs=120.0
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCC--CCCcccHHHHHHHHHhhhhcc
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSD--RDGKVNFKEFFHGLFDLVRNY 269 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d--~dG~Is~~EF~~~l~~~~~~~ 269 (374)
......+++ +|..||..+||.|+......+|+.+| ...++.++.+.+...+.+ +--+|+|++|+.++....++
T Consensus 7 ~d~~~e~ke-~F~lfD~~gD~ki~~~q~gdvlRalG---~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vakn- 81 (152)
T KOG0030|consen 7 PDQMEEFKE-AFLLFDRTGDGKISGSQVGDVLRALG---QNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKN- 81 (152)
T ss_pred cchHHHHHH-HHHHHhccCcccccHHHHHHHHHHhc---CCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhc-
Confidence 345678998 99999999999999999999999998 567888999999998887 55789999999977776664
Q ss_pred CcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 270 DDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
......+...+-.+.||++++|.|...||+++|..+| +. +++++++.+++.. .|.+|.|+|+.|++
T Consensus 82 ----------k~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlG--ek-l~eeEVe~Llag~-eD~nG~i~YE~fVk 147 (152)
T KOG0030|consen 82 ----------KDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLG--EK-LTEEEVEELLAGQ-EDSNGCINYEAFVK 147 (152)
T ss_pred ----------cccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHH--hh-ccHHHHHHHHccc-cccCCcCcHHHHHH
Confidence 1344556777889999999999999999999999995 43 7899999999887 48899999999998
Q ss_pred C
Q 017306 350 N 350 (374)
Q Consensus 350 ~ 350 (374)
+
T Consensus 148 ~ 148 (152)
T KOG0030|consen 148 H 148 (152)
T ss_pred H
Confidence 4
No 23
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=99.52 E-value=2e-14 Score=132.27 Aligned_cols=217 Identities=14% Similarity=0.165 Sum_probs=155.0
Q ss_pred cchhhhhhhhccCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHh------ch--------hhh-HHHHH--
Q 017306 96 PEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQ------AE--------RDV-MHRTQ-- 158 (374)
Q Consensus 96 ~~~~~~~~~~~~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~------~~--------~~~-~~~~~-- 158 (374)
-.+-++.--.+.|+.- +..++-+|+.||.| |||.|+.+||..+..-. +. ..+ .-.+.
T Consensus 216 IsfSdYiFLlTlLS~p-----~~~F~IAFKMFD~d-gnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsa 289 (489)
T KOG2643|consen 216 ISFSDYIFLLTLLSIP-----ERNFRIAFKMFDLD-GNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSA 289 (489)
T ss_pred eeHHHHHHHHHHHccC-----cccceeeeeeeecC-CCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhh
Confidence 3344443333445443 34677899999999 99999999998865332 11 000 01111
Q ss_pred HHHHhhcCCCCcceecccccccccccCCCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHH
Q 017306 159 REMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLS 238 (374)
Q Consensus 159 ~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~ 238 (374)
-..-.+..+++|+++++||+.++. ..+.+.++. -|..+|+..+|.|+..+|..+|-.....+.+-....+
T Consensus 290 L~~yFFG~rg~~kLs~deF~~F~e---------~Lq~Eil~l-EF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~l 359 (489)
T KOG2643|consen 290 LLTYFFGKRGNGKLSIDEFLKFQE---------NLQEEILEL-EFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYL 359 (489)
T ss_pred HHHHhhccCCCccccHHHHHHHHH---------HHHHHHHHH-HHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHH
Confidence 124567899999999999999875 334455666 8999999999999999999998766544445555577
Q ss_pred HHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCC
Q 017306 239 KEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPS 318 (374)
Q Consensus 239 ~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~ 318 (374)
+++-+.++.+ +-.||++||.. +.....+.. .+.-+...+- ...+.|+..+|+++.....
T Consensus 360 krvk~kf~~~-~~gISl~Ef~~-Ff~Fl~~l~----------------dfd~Al~fy~-~Ag~~i~~~~f~raa~~vt-- 418 (489)
T KOG2643|consen 360 KRVKEKFKDD-GKGISLQEFKA-FFRFLNNLN----------------DFDIALRFYH-MAGASIDEKTFQRAAKVVT-- 418 (489)
T ss_pred HHHHHhccCC-CCCcCHHHHHH-HHHHHhhhh----------------HHHHHHHHHH-HcCCCCCHHHHHHHHHHhc--
Confidence 8888888877 44599999998 445544321 2233333332 3347899999999998873
Q ss_pred cccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 319 ERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 319 ~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
...+++..++.+|..+|.|+||.||.+||+.
T Consensus 419 GveLSdhVvdvvF~IFD~N~Dg~LS~~EFl~ 449 (489)
T KOG2643|consen 419 GVELSDHVVDVVFTIFDENNDGTLSHKEFLA 449 (489)
T ss_pred CcccccceeeeEEEEEccCCCCcccHHHHHH
Confidence 4567888999999999999999999999998
No 24
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.49 E-value=7.9e-14 Score=127.62 Aligned_cols=133 Identities=19% Similarity=0.202 Sum_probs=119.0
Q ss_pred HHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchh-hhHHHHHHHHHhhcCCCCcceecccccccccccCCCCCCcccch
Q 017306 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAER-DVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDM 195 (374)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~-~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~ 195 (374)
..+++.+|..+|.+ ++|.|+..++.+.+..+... ........+|..+|.|.||.++|+||...+.. . .
T Consensus 13 ~~r~~~lf~~lD~~-~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~---------~-E 81 (463)
T KOG0036|consen 13 DIRIRCLFKELDSK-NDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN---------K-E 81 (463)
T ss_pred HHHHHHHHHHhccC-CCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH---------h-H
Confidence 77899999999999 99999999999999999776 55667788899999999999999999998753 2 2
Q ss_pred hHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 196 GWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 196 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
..+.+ +|...|.++||.|..+|+.+.|+.++ .+++++.+..+++.+|+++.+.|+++||...+.-
T Consensus 82 ~~l~~-~F~~iD~~hdG~i~~~Ei~~~l~~~g---i~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll 146 (463)
T KOG0036|consen 82 LELYR-IFQSIDLEHDGKIDPNEIWRYLKDLG---IQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLL 146 (463)
T ss_pred HHHHH-HHhhhccccCCccCHHHHHHHHHHhC---CccCHHHHHHHHHHhccCCCeeeccHHHHhhhhc
Confidence 34555 99999999999999999999999998 6899999999999999999999999999986643
No 25
>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.48 E-value=1.4e-13 Score=122.75 Aligned_cols=142 Identities=23% Similarity=0.335 Sum_probs=114.6
Q ss_pred hHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHH-HHHHHHHhhcCCCCcceecccccccccccCCCCCCccc
Q 017306 115 NVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMH-RTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGY 193 (374)
Q Consensus 115 ~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~-~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~ 193 (374)
.+..+=++.|+..|.| +||.+|.+||..+|..-..+.+.. .+...+...|+|+||.|+++||+.-+..... ...
T Consensus 160 km~~rDe~rFk~AD~d-~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~----~~~ 234 (325)
T KOG4223|consen 160 KMIARDEERFKAADQD-GDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEG----NEE 234 (325)
T ss_pred HHHHHHHHHHhhcccC-CCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccC----CCC
Confidence 4455667899999999 999999999999998875544443 3567799999999999999999998875443 122
Q ss_pred chhHH---HHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 194 DMGWW---KEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 194 ~~~~~---~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
+.+|+ +++.|...|+|+||+|+.+|++.++.+.+ ......++..++.+.|.|+||++|++|.+.-...
T Consensus 235 epeWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~---~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~d~ 305 (325)
T KOG4223|consen 235 EPEWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSE---QDHAKAEARHLLHEADEDKDGKLSKEEILEHYDV 305 (325)
T ss_pred CcccccccHHHHHHHhhcCCCCccCHHHHhcccCCCC---ccHHHHHHHHHhhhhccCccccccHHHHhhCcce
Confidence 33443 22366778999999999999999999877 4678889999999999999999999998874433
No 26
>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]
Probab=99.46 E-value=6.7e-13 Score=121.60 Aligned_cols=132 Identities=22% Similarity=0.285 Sum_probs=116.7
Q ss_pred chhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCC
Q 017306 194 DMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEG 273 (374)
Q Consensus 194 ~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~ 273 (374)
....++. +|+.+|.+++|.++..++.+.+..+.. +......+..++..+|.|.||.++|+||...+....
T Consensus 12 r~~r~~~-lf~~lD~~~~g~~d~~~l~k~~~~l~~--~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E------- 81 (463)
T KOG0036|consen 12 RDIRIRC-LFKELDSKNDGQVDLDQLEKGLEKLDH--PKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKE------- 81 (463)
T ss_pred HHHHHHH-HHHHhccCCCCceeHHHHHHHHHhcCC--CCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhH-------
Confidence 3445677 999999999999999999998887765 356667788899999999999999999999875543
Q ss_pred CCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcC
Q 017306 274 HNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIEN 350 (374)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~ 350 (374)
.++...|..+|.+.||.|+.+|+.+.++.++. .++++++..++..+|.++++.|+++||..+
T Consensus 82 ------------~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi---~l~de~~~k~~e~~d~~g~~~I~~~e~rd~ 143 (463)
T KOG0036|consen 82 ------------LELYRIFQSIDLEHDGKIDPNEIWRYLKDLGI---QLSDEKAAKFFEHMDKDGKATIDLEEWRDH 143 (463)
T ss_pred ------------HHHHHHHhhhccccCCccCHHHHHHHHHHhCC---ccCHHHHHHHHHHhccCCCeeeccHHHHhh
Confidence 47889999999999999999999999999953 388999999999999999999999999884
No 27
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.17 E-value=4.5e-11 Score=84.80 Aligned_cols=63 Identities=33% Similarity=0.528 Sum_probs=54.2
Q ss_pred HHHHHhhhhccCCCCccCHHhHHHHHHhhCCCc-ccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 287 PARQLFGQLDKDGDGYLSDVELLPIIGKLHPSE-RYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 287 ~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~-~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
.++.+|+.+|+|++|+|+.+||+.++..++... ....+..+..+|+.+|.|+||.|+++||++
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~ 64 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLN 64 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhc
Confidence 367899999999999999999999999985321 234566788889999999999999999997
No 28
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=99.16 E-value=6.8e-11 Score=83.87 Aligned_cols=64 Identities=30% Similarity=0.429 Sum_probs=55.1
Q ss_pred HHHHhhhhcCCCCCCCccHHHHHHhhccCCCCC-hhhhHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 017306 198 WKEEHFNASDADGDGLLNLTEFNDFLHPADTKN-PKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262 (374)
Q Consensus 198 ~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~-~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l 262 (374)
+++ +|+.+|+|++|+|+.+||..++...+... +......+..+|+.+|.|+||.|+|+||+.++
T Consensus 2 l~~-~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 2 LKE-AFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHH-HHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred HHH-HHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 566 99999999999999999999999876422 45566678888999999999999999999864
No 29
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=99.13 E-value=9.1e-10 Score=102.78 Aligned_cols=189 Identities=19% Similarity=0.233 Sum_probs=135.0
Q ss_pred hhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCC-cceecccccccccccCCCCCCcc
Q 017306 114 FNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKD-GFVSFAEYEPPTWVRNSDNNSFG 192 (374)
Q Consensus 114 ~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~d-G~Is~~EF~~~~~~~~~~~~~~~ 192 (374)
+...-.+.++|-.+++. +.|.|+..|+..-..-.. +..+-..-|.+.- ..-|++-|...+.
T Consensus 221 ~Y~~tvi~rIFy~~nrs-~tG~iti~el~~snll~~-------l~~l~eEed~nq~~~~FS~e~f~viy~---------- 282 (493)
T KOG2562|consen 221 RYAETVIQRIFYYLNRS-RTGRITIQELLRSNLLDA-------LLELDEEEDINQVTRYFSYEHFYVIYC---------- 282 (493)
T ss_pred HHHHHHhhhhheeeCCc-cCCceeHHHHHHhHHHHH-------HHHHHHHhhhhhhhhheeHHHHHHHHH----------
Confidence 34555778899999998 999999999876322111 1111111133321 2335555554333
Q ss_pred cchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHH----HhcCCCCCcccHHHHHHHHHhhhhc
Q 017306 193 YDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVR----ERDSDRDGKVNFKEFFHGLFDLVRN 268 (374)
Q Consensus 193 ~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~----~~D~d~dG~Is~~EF~~~l~~~~~~ 268 (374)
.|..+|+|++|.|+.+++...-.. .++...++++|. ..-.-.+|+++|++|+..+.....
T Consensus 283 ---------kFweLD~Dhd~lidk~~L~ry~d~------tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~- 346 (493)
T KOG2562|consen 283 ---------KFWELDTDHDGLIDKEDLKRYGDH------TLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEED- 346 (493)
T ss_pred ---------HHhhhccccccccCHHHHHHHhcc------chhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhcc-
Confidence 688899999999999999987653 456778889998 344558899999999998876532
Q ss_pred cCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHh-------hCCCcccchHHHHHHHHHHccCCCCCc
Q 017306 269 YDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGK-------LHPSERYYAKQQADYIISQADTDKDGR 341 (374)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~-------l~~~~~~~~~~~~~~l~~~~D~n~dG~ 341 (374)
......+...|+.+|.+++|.|+..||+.+... ++. +...-.+...+|+..+-.-..|+
T Consensus 347 -------------k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~-e~l~fed~l~qi~DMvkP~~~~k 412 (493)
T KOG2562|consen 347 -------------KDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQ-EALPFEDALCQIRDMVKPEDENK 412 (493)
T ss_pred -------------CCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCC-CcccHHHHHHHHHHHhCccCCCc
Confidence 445567899999999999999999999966553 222 22334677888888888788899
Q ss_pred ccHHHHhcC
Q 017306 342 LTLLEMIEN 350 (374)
Q Consensus 342 Is~~EFl~~ 350 (374)
||+.+|++.
T Consensus 413 ItLqDlk~s 421 (493)
T KOG2562|consen 413 ITLQDLKGS 421 (493)
T ss_pred eeHHHHhhc
Confidence 999999983
No 30
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.09 E-value=2.3e-10 Score=85.54 Aligned_cols=69 Identities=22% Similarity=0.341 Sum_probs=60.1
Q ss_pred hhHHHHHhhhhcCC-CCCCCccHHHHHHhhcc-CCCCChhhhH-HHHHHHHHHhcCCCCCcccHHHHHHHHHhhhh
Q 017306 195 MGWWKEEHFNASDA-DGDGLLNLTEFNDFLHP-ADTKNPKLIL-WLSKEEVRERDSDRDGKVNFKEFFHGLFDLVR 267 (374)
Q Consensus 195 ~~~~~~~~F~~~D~-d~dG~Is~~E~~~~l~~-~~~~~~~~~~-~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~ 267 (374)
+..++. +|+.||. +++|+|+..||+.++.. ++ ..++. ..++.+++.+|.|+||.|+|+||+.++.....
T Consensus 7 i~~l~~-~F~~fd~~~~~g~i~~~ELk~ll~~elg---~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~~ 78 (89)
T cd05022 7 IETLVS-NFHKASVKGGKESLTASEFQELLTQQLP---HLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELAK 78 (89)
T ss_pred HHHHHH-HHHHHhCCCCCCeECHHHHHHHHHHHhh---hhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHH
Confidence 456777 9999999 99999999999999998 65 34666 88999999999999999999999998766543
No 31
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=99.07 E-value=5.1e-10 Score=88.28 Aligned_cols=97 Identities=22% Similarity=0.359 Sum_probs=81.0
Q ss_pred HHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCC
Q 017306 238 SKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHP 317 (374)
Q Consensus 238 ~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~ 317 (374)
-+++...+..||.|.++|++|+.+++..... ....-.+..+|+.+|-|+|++|...+|...+.++..
T Consensus 73 k~ri~e~FSeDG~GnlsfddFlDmfSV~sE~-------------APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr 139 (189)
T KOG0038|consen 73 KRRICEVFSEDGRGNLSFDDFLDMFSVFSEM-------------APRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTR 139 (189)
T ss_pred HHHHHHHhccCCCCcccHHHHHHHHHHHHhh-------------ChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhh
Confidence 3567788999999999999999988877663 334456788999999999999999999999999853
Q ss_pred CcccchHHH----HHHHHHHccCCCCCcccHHHHhc
Q 017306 318 SERYYAKQQ----ADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 318 ~~~~~~~~~----~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
+ .+++++ ++.++.++|.||||+|++.||-.
T Consensus 140 ~--eLs~eEv~~i~ekvieEAD~DgDgkl~~~eFe~ 173 (189)
T KOG0038|consen 140 D--ELSDEEVELICEKVIEEADLDGDGKLSFAEFEH 173 (189)
T ss_pred c--cCCHHHHHHHHHHHHHHhcCCCCCcccHHHHHH
Confidence 3 345544 67888999999999999999987
No 32
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.06 E-value=2.8e-10 Score=85.06 Aligned_cols=68 Identities=15% Similarity=0.237 Sum_probs=59.3
Q ss_pred hHHHHHhhhhcc-CCCCccCHHhHHHHHHh-hCCCcccchH-HHHHHHHHHccCCCCCcccHHHHhcCccchhhcccc
Q 017306 286 APARQLFGQLDK-DGDGYLSDVELLPIIGK-LHPSERYYAK-QQADYIISQADTDKDGRLTLLEMIENPYVFYSAIFT 360 (374)
Q Consensus 286 ~~~~~~F~~~D~-d~dG~Is~~El~~~l~~-l~~~~~~~~~-~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~~~ 360 (374)
..++.+|+.||+ +++|+|+..||+.++.. ++ +. ++. ..++.+|+.+|.|+||+|+|+||+. .+++++.
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg--~~-ls~~~~v~~mi~~~D~d~DG~I~F~EF~~----l~~~l~~ 78 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLP--HL-LKDVEGLEEKMKNLDVNQDSKLSFEEFWE----LIGELAK 78 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhh--hh-ccCHHHHHHHHHHhCCCCCCCCcHHHHHH----HHHHHHH
Confidence 478899999999 99999999999999998 63 32 556 8999999999999999999999999 6666543
No 33
>PLN02964 phosphatidylserine decarboxylase
Probab=99.04 E-value=1.4e-09 Score=108.49 Aligned_cols=102 Identities=19% Similarity=0.249 Sum_probs=81.9
Q ss_pred chhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChh-hhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcC
Q 017306 194 DMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPK-LILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDE 272 (374)
Q Consensus 194 ~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~-~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~ 272 (374)
+.+.+++ +|..+|+|++|.| +..++..++..++. .....++.+|+.+|.|++|.|+++||+.++....
T Consensus 141 qi~elke-aF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg------ 209 (644)
T PLN02964 141 EPESACE-SFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFG------ 209 (644)
T ss_pred HHHHHHH-HHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhc------
Confidence 4567888 9999999999997 77777776621122 2223489999999999999999999999876532
Q ss_pred CCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHh
Q 017306 273 GHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGK 314 (374)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~ 314 (374)
.....+.+..+|+.+|+|++|+|+.+||..++..
T Consensus 210 --------~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 210 --------NLVAANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred --------cCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 1234567999999999999999999999999987
No 34
>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]
Probab=99.02 E-value=8.2e-10 Score=102.26 Aligned_cols=157 Identities=17% Similarity=0.190 Sum_probs=109.1
Q ss_pred hcCCCCcceecccccccccccCCCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccC------CC-----C--C
Q 017306 164 HDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPA------DT-----K--N 230 (374)
Q Consensus 164 ~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~------~~-----~--~ 230 (374)
++.+.+|.|||.||+-++..... ....++- +|++||.||||-|+.+||..+..-. +. . +
T Consensus 208 ~~lg~~GLIsfSdYiFLlTlLS~-------p~~~F~I-AFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~ 279 (489)
T KOG2643|consen 208 YKLGESGLISFSDYIFLLTLLSI-------PERNFRI-AFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTG 279 (489)
T ss_pred EEcCCCCeeeHHHHHHHHHHHcc-------Cccccee-eeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCcccc
Confidence 35667899999999977764333 2333555 9999999999999999999876311 10 0 0
Q ss_pred hhhhHHHHH-HHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHH
Q 017306 231 PKLILWLSK-EEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELL 309 (374)
Q Consensus 231 ~~~~~~~~~-~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~ 309 (374)
......... -+..-|..+++++++++||+..+..... +.++--|..+|+..+|.|+..+|.
T Consensus 280 ~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~e~Lq~------------------Eil~lEF~~~~~~~~g~Ise~DFA 341 (489)
T KOG2643|consen 280 NSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQENLQE------------------EILELEFERFDKGDSGAISEVDFA 341 (489)
T ss_pred ceehhhhhhhHHHHhhccCCCccccHHHHHHHHHHHHH------------------HHHHHHHHHhCcccccccCHHHHH
Confidence 011111111 1344688999999999999997755433 466777999999999999999999
Q ss_pred HHHHhhCCCcccchH--HHHHHHHHHccCCCCCcccHHHHhc
Q 017306 310 PIIGKLHPSERYYAK--QQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 310 ~~l~~l~~~~~~~~~--~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
.+|-.+. ..+..+ .....+-+.++.+ +-.||++||..
T Consensus 342 ~~lL~~a--~~n~~~k~~~lkrvk~kf~~~-~~gISl~Ef~~ 380 (489)
T KOG2643|consen 342 ELLLAYA--GVNSKKKHKYLKRVKEKFKDD-GKGISLQEFKA 380 (489)
T ss_pred HHHHHHc--ccchHhHHHHHHHHHHhccCC-CCCcCHHHHHH
Confidence 9987653 211112 2356666677665 45699999888
No 35
>PLN02964 phosphatidylserine decarboxylase
Probab=98.99 E-value=7.8e-10 Score=110.37 Aligned_cols=104 Identities=20% Similarity=0.259 Sum_probs=87.0
Q ss_pred cCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhc-hhhhHHH---HHHHHHhhcCCCCcceeccccccccc
Q 017306 107 YLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQA-ERDVMHR---TQREMETHDKNKDGFVSFAEYEPPTW 182 (374)
Q Consensus 107 ~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~-~~~~~~~---~~~~~~~~D~d~dG~Is~~EF~~~~~ 182 (374)
.++..+ .++++++|..+|.| ++|.+ +..+++.++ ..++..+ +..+|+.+|.|++|.|+|+||+.++.
T Consensus 136 ~f~~kq----i~elkeaF~lfD~d-gdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~ 206 (644)
T PLN02964 136 DFVTQE----PESACESFDLLDPS-SSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIK 206 (644)
T ss_pred hccHHH----HHHHHHHHHHHCCC-CCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence 444444 57889999999999 99997 888899998 4666665 78999999999999999999999887
Q ss_pred ccCCCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhcc
Q 017306 183 VRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225 (374)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~ 225 (374)
... .....+.++. +|+.+|.|++|+|+.+||..++..
T Consensus 207 ~lg-----~~~seEEL~e-aFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 207 AFG-----NLVAANKKEE-LFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred Hhc-----cCCCHHHHHH-HHHHhCCCCCCcCCHHHHHHHHHh
Confidence 422 1234567888 999999999999999999999876
No 36
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=98.96 E-value=4.6e-09 Score=98.45 Aligned_cols=204 Identities=18% Similarity=0.290 Sum_probs=143.9
Q ss_pred HHHHHhhh---cccCCCCCCCcccHHHHHHHHHHh-chhhhHHHHHHHH-HhhcCCCCcceecccccccccccCCCCCCc
Q 017306 117 TDRLVLLF---PKIDVNPADGYINEDELTDWNMQQ-AERDVMHRTQREM-ETHDKNKDGFVSFAEYEPPTWVRNSDNNSF 191 (374)
Q Consensus 117 ~~~l~~~F---~~~D~d~~dG~Is~~El~~~l~~~-~~~~~~~~~~~~~-~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~ 191 (374)
..+|+.+| ...+.+ +..+++.++|......+ +.+-..+.+.++. ...|..+||.|||+||+.+-...+.
T Consensus 32 ~~eLr~if~~~as~e~~-ge~~mt~edFv~~ylgL~~e~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC~----- 105 (694)
T KOG0751|consen 32 PKELRSIFLKYASIEKN-GESYMTPEDFVRRYLGLYNESNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLCA----- 105 (694)
T ss_pred hHHHHHHHHHHhHHhhc-cccccCHHHHHHHHHhhcccccCChHHHHHHHhhhhhcccccccHHHHHHHHhhccC-----
Confidence 34455554 457888 88899999997755544 3333344444444 5668889999999999976543322
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCc
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDD 271 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~ 271 (374)
....... +|..||+.++|.+|.+++.+++....-.+...-.+..+-+-..+..+..-.++|.||.+.+.....
T Consensus 106 --pDal~~~-aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~~~~r~~ny~~f~Q~lh~~~~---- 178 (694)
T KOG0751|consen 106 --PDALFEV-AFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGDIRKRHLNYAEFTQFLHEFQL---- 178 (694)
T ss_pred --chHHHHH-HHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhhHHHHhccHHHHHHHHHHHHH----
Confidence 2233455 999999999999999999999876543223333333344444565566677999999998876654
Q ss_pred CCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 272 EGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
+..+++|+..|+.++|+||.-+++.++-... .+.+++..-+.+......+..-++|+-.|..
T Consensus 179 --------------E~~~qafr~~d~~~ng~is~Ldfq~imvt~~--~h~lt~~v~~nlv~vagg~~~H~vSf~yf~a 240 (694)
T KOG0751|consen 179 --------------EHAEQAFREKDKAKNGFISVLDFQDIMVTIR--IHLLTPFVEENLVSVAGGNDSHQVSFSYFNA 240 (694)
T ss_pred --------------HHHHHHHHHhcccCCCeeeeechHhhhhhhh--hhcCCHHHhhhhhhhcCCCCccccchHHHHH
Confidence 4678999999999999999999999987653 3345565556666666666666788877766
No 37
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.94 E-value=2.2e-09 Score=80.39 Aligned_cols=68 Identities=25% Similarity=0.429 Sum_probs=59.1
Q ss_pred hHHHHHhhhhc-cCCCC-ccCHHhHHHHHHh-----hCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhcc
Q 017306 286 APARQLFGQLD-KDGDG-YLSDVELLPIIGK-----LHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSAI 358 (374)
Q Consensus 286 ~~~~~~F~~~D-~d~dG-~Is~~El~~~l~~-----l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~ 358 (374)
..++.+|+.|| +||+| .|+.+||+.+|+. ++ ...++.+++.+++.+|.|+||+|+|+||+. ++...
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg---~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~----li~~~ 80 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLE---EIKEQEVVDKVMETLDSDGDGECDFQEFMA----FVAMV 80 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhc---CCCCHHHHHHHHHHhCCCCCCcCcHHHHHH----HHHHH
Confidence 47899999998 89999 5999999999998 63 225788899999999999999999999999 66665
Q ss_pred cc
Q 017306 359 FT 360 (374)
Q Consensus 359 ~~ 360 (374)
.+
T Consensus 81 ~~ 82 (88)
T cd05027 81 TT 82 (88)
T ss_pred HH
Confidence 54
No 38
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.93 E-value=2.6e-09 Score=79.92 Aligned_cols=67 Identities=21% Similarity=0.287 Sum_probs=58.2
Q ss_pred hhHHHHHhhhhcC-CCCCC-CccHHHHHHhhcc-----CCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 195 MGWWKEEHFNASD-ADGDG-LLNLTEFNDFLHP-----ADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 195 ~~~~~~~~F~~~D-~d~dG-~Is~~E~~~~l~~-----~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
+..+++ +|+.|| .+|+| .|+.+||+.+|+. .+ ...++.+++.+++.+|.|++|.|+|+||+..+...
T Consensus 7 ~~~l~~-aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg---~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 7 MVALID-VFHQYSGREGDKHKLKKSELKELINNELSHFLE---EIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred HHHHHH-HHHHhcccCCCcCEECHHHHHHHHHHHhHHHhc---CCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 456777 999998 79999 5999999999997 55 35677889999999999999999999999876554
No 39
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.89 E-value=2.8e-09 Score=98.60 Aligned_cols=145 Identities=18% Similarity=0.131 Sum_probs=106.5
Q ss_pred HHHHHhhhcccCCCCCCCcccHHHHHHHHHHh-chhhhHHHHHHHHHhhcCCCCcceecccccccccccCCCCCCccc--
Q 017306 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQ-AERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGY-- 193 (374)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~-~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~-- 193 (374)
...|...|.++|.+ ++|.|+...+..++... +.+++...+..- ....+.||.|.|.+....+.......+....
T Consensus 463 ~sdL~~eF~~~D~~-ksG~lsis~Wa~~mE~i~~L~LPWr~L~~k--la~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slv 539 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPK-KSGKLSISHWAKCMENITGLNLPWRLLRPK--LANGSDDGKVEYKSTLDNLDTEVILEEAGSSLV 539 (631)
T ss_pred hhHHHHHHHhcChh-hcCeeeHHHHHHHHHHHhcCCCcHHHhhhh--ccCCCcCcceehHhHHHHhhhhhHHHHHHhHHH
Confidence 44677889999999 99999999999988875 556665544433 3445567889988877665432221110001
Q ss_pred -----chhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCC-CChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 194 -----DMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADT-KNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 194 -----~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~-~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
....+.. +|+.+|.|++|.||.+||+.++..++. .+..+++.++.++.+.+|.|+||+|++.||+.++.-.
T Consensus 540 etLYr~ks~Let-iF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 540 ETLYRNKSSLET-IFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHHHhchhhHHH-HHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 1122344 999999999999999999998775532 3356788999999999999999999999999977543
No 40
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.85 E-value=6.5e-09 Score=78.86 Aligned_cols=70 Identities=21% Similarity=0.310 Sum_probs=56.8
Q ss_pred hHHHHHhhhhc-cCCCC-ccCHHhHHHHHHhhCCC--cccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhccc
Q 017306 286 APARQLFGQLD-KDGDG-YLSDVELLPIIGKLHPS--ERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSAIF 359 (374)
Q Consensus 286 ~~~~~~F~~~D-~d~dG-~Is~~El~~~l~~l~~~--~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~~ 359 (374)
..++.+|..|| +||+| .||..||+.++....+. ....++.+++.+++.+|.|+||.|+|+||+. ++..++
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~----l~~~l~ 83 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVV----LVAALT 83 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHH----HHHHHH
Confidence 46788899999 78999 59999999999773211 1123678999999999999999999999999 665554
No 41
>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]
Probab=98.83 E-value=1.1e-08 Score=94.65 Aligned_cols=146 Identities=21% Similarity=0.248 Sum_probs=99.6
Q ss_pred hhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCC-CCC
Q 017306 202 HFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSS-HPS 280 (374)
Q Consensus 202 ~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~-~~~ 280 (374)
.|+.+|..++|+|+......++....+.+ +.-..+. -+......||++.|.+.+..+..-.-. .. +.+. -+.
T Consensus 469 eF~~~D~~ksG~lsis~Wa~~mE~i~~L~--LPWr~L~--~kla~~s~d~~v~Y~~~~~~l~~e~~~-~e--a~~slvet 541 (631)
T KOG0377|consen 469 EFRKYDPKKSGKLSISHWAKCMENITGLN--LPWRLLR--PKLANGSDDGKVEYKSTLDNLDTEVIL-EE--AGSSLVET 541 (631)
T ss_pred HHHhcChhhcCeeeHHHHHHHHHHHhcCC--CcHHHhh--hhccCCCcCcceehHhHHHHhhhhhHH-HH--HHhHHHHH
Confidence 89999999999999999999887654322 2211111 122344567889988877654322110 00 0000 000
Q ss_pred CCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhC-CCcccchHHHHHHHHHHccCCCCCcccHHHHhcCccch
Q 017306 281 DDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLH-PSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVF 354 (374)
Q Consensus 281 ~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~-~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f 354 (374)
.-.....+..+|+.+|.|++|.||.+||+..++-+. .-...++++++..+...+|.|+||.|+++||+++|...
T Consensus 542 LYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 542 LYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred HHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 011123567789999999999999999998887542 12345789999999999999999999999999976543
No 42
>KOG4251 consensus Calcium binding protein [General function prediction only]
Probab=98.83 E-value=3.6e-09 Score=90.78 Aligned_cols=153 Identities=20% Similarity=0.208 Sum_probs=99.5
Q ss_pred hhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCC
Q 017306 195 MGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGH 274 (374)
Q Consensus 195 ~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~ 274 (374)
.+.++. +|...|.|.+|+||..|+++++.......-.-...+.+..|+..|.||||.|+|+||..-+......-..+.+
T Consensus 100 rrklmv-iFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekeva 178 (362)
T KOG4251|consen 100 RRKLMV-IFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVA 178 (362)
T ss_pred HHHHHH-HHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHH
Confidence 456777 9999999999999999999988643211112233445667899999999999999998765544322111110
Q ss_pred CCCCCCCCCCchHHHHHhhhhccCCCCccCH---------HhHHHHHHhhCCCc-ccchHHHHHHHHHHccCCCCCcccH
Q 017306 275 NSSHPSDDTMDAPARQLFGQLDKDGDGYLSD---------VELLPIIGKLHPSE-RYYAKQQADYIISQADTDKDGRLTL 344 (374)
Q Consensus 275 ~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~---------~El~~~l~~l~~~~-~~~~~~~~~~l~~~~D~n~dG~Is~ 344 (374)
..-.-+.......-++.|..-+++..|.++. .|+...| +|.. ...-..-++.|+..+|.|+|..+|.
T Consensus 179 dairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFL---HPEhSrgmLrfmVkeivrdlDqdgDkqlSv 255 (362)
T KOG4251|consen 179 DAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFL---HPEHSRGMLRFMVKEIVRDLDQDGDKQLSV 255 (362)
T ss_pred HHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHc---ChHhhhhhHHHHHHHHHHHhccCCCeeecc
Confidence 0000001111122234455556666666655 8887777 4432 1123567899999999999999999
Q ss_pred HHHhcCc
Q 017306 345 LEMIENP 351 (374)
Q Consensus 345 ~EFl~~~ 351 (374)
.||+..+
T Consensus 256 peFislp 262 (362)
T KOG4251|consen 256 PEFISLP 262 (362)
T ss_pred hhhhcCC
Confidence 9999843
No 43
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.82 E-value=7.5e-09 Score=73.37 Aligned_cols=62 Identities=37% Similarity=0.484 Sum_probs=54.6
Q ss_pred HHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCccchh
Q 017306 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFY 355 (374)
Q Consensus 289 ~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~ 355 (374)
+.+|+.+|+|++|.|+.+|++.++..++ .+...+..++..+|.+++|.|++.||+..+....
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g-----~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~ 63 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSG-----LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIA 63 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcC-----CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 5789999999999999999999998874 3678899999999999999999999999554443
No 44
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.79 E-value=1.4e-08 Score=77.05 Aligned_cols=70 Identities=24% Similarity=0.305 Sum_probs=56.1
Q ss_pred hhHHHHHhhhhcC-CCCCC-CccHHHHHHhhccCCC--CChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 195 MGWWKEEHFNASD-ADGDG-LLNLTEFNDFLHPADT--KNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 195 ~~~~~~~~F~~~D-~d~dG-~Is~~E~~~~l~~~~~--~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
+..+++ +|..|| .|++| +||..||+.++....+ .....+...++.+++.+|.|++|.|+|+||+.++...
T Consensus 9 ~~~~~~-~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 9 MDTLIR-IFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHH-HHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 455677 999999 78998 5999999999965211 0123366789999999999999999999999977654
No 45
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.78 E-value=7.5e-09 Score=79.17 Aligned_cols=69 Identities=14% Similarity=0.198 Sum_probs=61.9
Q ss_pred cCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceeccccccccc
Q 017306 107 YLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (374)
Q Consensus 107 ~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 182 (374)
++++++ ...++.+|..+|.+ ++|.|+.+|+..+++..+ .+..++..+|..+|.+++|.|+|+||+.++.
T Consensus 3 ~ls~~~----~~~l~~~F~~~D~d-~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~ 71 (96)
T smart00027 3 AISPED----KAKYEQIFRSLDKN-QDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMH 71 (96)
T ss_pred CCCHHH----HHHHHHHHHHhCCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 567776 67899999999999 999999999999999875 5678899999999999999999999998764
No 46
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.77 E-value=1.8e-08 Score=75.41 Aligned_cols=70 Identities=20% Similarity=0.288 Sum_probs=58.1
Q ss_pred hHHHHHhhhhcc-CC-CCccCHHhHHHHHHhh-CCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhcccc
Q 017306 286 APARQLFGQLDK-DG-DGYLSDVELLPIIGKL-HPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSAIFT 360 (374)
Q Consensus 286 ~~~~~~F~~~D~-d~-dG~Is~~El~~~l~~l-~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~~~ 360 (374)
..+..+|..||. || +|+|+.+||+.++.+. ..+. ..+.+++..+|+.+|.|++|+|+|+||+. +++.++.
T Consensus 10 ~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~-k~t~~ev~~m~~~~D~d~dG~Idf~EFv~----lm~~l~~ 82 (88)
T cd05029 10 GLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGS-KLQDAEIAKLMEDLDRNKDQEVNFQEYVT----FLGALAL 82 (88)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCC-CCCHHHHHHHHHHhcCCCCCCCcHHHHHH----HHHHHHH
Confidence 357788999998 77 8999999999999742 1133 36889999999999999999999999998 7766553
No 47
>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]
Probab=98.77 E-value=8.8e-09 Score=81.38 Aligned_cols=102 Identities=24% Similarity=0.283 Sum_probs=76.2
Q ss_pred HHHHhhcCCCCcceecccccccccccCCCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCC--CChhhhHH
Q 017306 159 REMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADT--KNPKLILW 236 (374)
Q Consensus 159 ~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~--~~~~~~~~ 236 (374)
++...+-.||.|.+||+.|+.+++...- +.... -+..- +|+.+|-|+|++|..+++...+..+.. ..+.....
T Consensus 75 ri~e~FSeDG~GnlsfddFlDmfSV~sE---~APrd-lK~~Y-AFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~ 149 (189)
T KOG0038|consen 75 RICEVFSEDGRGNLSFDDFLDMFSVFSE---MAPRD-LKAKY-AFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVEL 149 (189)
T ss_pred HHHHHhccCCCCcccHHHHHHHHHHHHh---hChHH-hhhhh-eeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHH
Confidence 4445566799999999999988864422 11222 22333 999999999999999999999876632 22344445
Q ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 237 LSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 237 ~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
.++.++.+.|.||||+|++.||-.++...
T Consensus 150 i~ekvieEAD~DgDgkl~~~eFe~~i~ra 178 (189)
T KOG0038|consen 150 ICEKVIEEADLDGDGKLSFAEFEHVILRA 178 (189)
T ss_pred HHHHHHHHhcCCCCCcccHHHHHHHHHhC
Confidence 57788999999999999999999977653
No 48
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.74 E-value=1.7e-08 Score=76.51 Aligned_cols=72 Identities=22% Similarity=0.316 Sum_probs=58.6
Q ss_pred chHHHHHhhhhc-cCCCC-ccCHHhHHHHHHh-hCCC-cccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhcccc
Q 017306 285 DAPARQLFGQLD-KDGDG-YLSDVELLPIIGK-LHPS-ERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSAIFT 360 (374)
Q Consensus 285 ~~~~~~~F~~~D-~d~dG-~Is~~El~~~l~~-l~~~-~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~~~ 360 (374)
...++++|..|| .+++| .|+..||+.+++. ++.. ....+..+++.+|+.+|.|++|.|+|+||+. ++..++.
T Consensus 8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~----l~~~~~~ 83 (92)
T cd05025 8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVV----LVAALTV 83 (92)
T ss_pred HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHH----HHHHHHH
Confidence 357899999997 99999 5999999999986 5310 0124678999999999999999999999998 6655543
No 49
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.74 E-value=3e-08 Score=74.18 Aligned_cols=67 Identities=22% Similarity=0.330 Sum_probs=57.1
Q ss_pred hhHHHHHhhhhcCC-CC-CCCccHHHHHHhhcc---CCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 195 MGWWKEEHFNASDA-DG-DGLLNLTEFNDFLHP---ADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 195 ~~~~~~~~F~~~D~-d~-dG~Is~~E~~~~l~~---~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
...+-. +|..||. || +|+|+.+||+.++.. .+ ..++..++.++++.+|.|++|+|+|+||+..+...
T Consensus 9 ~~~~i~-~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg---~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 9 IGLLVA-IFHKYSGREGDKNTLSKKELKELIQKELTIG---SKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHH-HHHHHHccCCCCCEECHHHHHHHHHHHHhcC---CCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 344566 9999998 77 899999999999963 44 56788999999999999999999999999877554
No 50
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.74 E-value=2.6e-08 Score=74.70 Aligned_cols=71 Identities=23% Similarity=0.363 Sum_probs=59.0
Q ss_pred hHHHHHhhh-hccCCCC-ccCHHhHHHHHHhhCCC--cccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhcccc
Q 017306 286 APARQLFGQ-LDKDGDG-YLSDVELLPIIGKLHPS--ERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSAIFT 360 (374)
Q Consensus 286 ~~~~~~F~~-~D~d~dG-~Is~~El~~~l~~l~~~--~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~~~ 360 (374)
..+..+|+. +|++|+| .||.+||+.++....|. .....+.+++.+++.+|.|+||.|+|+||+. ++..++.
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~----l~~~l~~ 83 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLN----LIGGLAV 83 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHH----HHHHHHH
Confidence 467889999 7898986 99999999999876432 1224578899999999999999999999999 7777664
No 51
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.73 E-value=3.2e-08 Score=75.03 Aligned_cols=70 Identities=26% Similarity=0.346 Sum_probs=57.3
Q ss_pred hhHHHHHhhhhcC-CCCCCC-ccHHHHHHhhcc-CCC-CChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 195 MGWWKEEHFNASD-ADGDGL-LNLTEFNDFLHP-ADT-KNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 195 ~~~~~~~~F~~~D-~d~dG~-Is~~E~~~~l~~-~~~-~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
.+.+++ +|..|| .+++|+ |+..||+.+|.. ++. .....+...++.+++.+|.|++|.|+|+||+.++...
T Consensus 8 ~~~l~~-~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 8 METLIN-VFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHH-HHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 456788 999997 999995 999999999975 431 0013477889999999999999999999999877654
No 52
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.73 E-value=2.7e-08 Score=75.77 Aligned_cols=69 Identities=23% Similarity=0.309 Sum_probs=56.1
Q ss_pred hhHHHHHhhhhcCC-CC-CCCccHHHHHHhhcc-CCC-CChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 195 MGWWKEEHFNASDA-DG-DGLLNLTEFNDFLHP-ADT-KNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 195 ~~~~~~~~F~~~D~-d~-dG~Is~~E~~~~l~~-~~~-~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
...++. +|..||. |+ +|.|+.+||+.++.. .+. .....+..+++.+++.+|.+++|.|+|+||+.++..
T Consensus 7 ~~~l~~-~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 7 MESLIL-TFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHH-HHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 345777 9999997 97 799999999999975 210 013557788999999999999999999999986654
No 53
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.72 E-value=3.3e-08 Score=75.60 Aligned_cols=70 Identities=21% Similarity=0.233 Sum_probs=60.1
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhh
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVR 267 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~ 267 (374)
..+...++. +|..+|.+++|.|+.+|++.+++..+ ++..++..++..+|.+++|.|+|+||+.++....+
T Consensus 6 ~~~~~~l~~-~F~~~D~d~~G~Is~~el~~~l~~~~-----~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~ 75 (96)
T smart00027 6 PEDKAKYEQ-IFRSLDKNQDGTVTGAQAKPILLKSG-----LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYR 75 (96)
T ss_pred HHHHHHHHH-HHHHhCCCCCCeEeHHHHHHHHHHcC-----CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHH
Confidence 345667888 99999999999999999999998753 46678999999999999999999999997765443
No 54
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.72 E-value=2.8e-08 Score=70.36 Aligned_cols=59 Identities=31% Similarity=0.408 Sum_probs=52.8
Q ss_pred hhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 202 HFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 202 ~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
+|..+|++++|.|+.+|+..++...+ .+...+..+++.+|.+++|.|+|.||+..+...
T Consensus 4 ~F~~~D~~~~G~i~~~el~~~l~~~g-----~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 4 IFRSLDPDGDGLISGDEARPFLGKSG-----LPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred HHHHhCCCCCCcCcHHHHHHHHHHcC-----CCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 89999999999999999999998764 367789999999999999999999999976543
No 55
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.68 E-value=1.7e-08 Score=76.81 Aligned_cols=66 Identities=20% Similarity=0.298 Sum_probs=58.4
Q ss_pred HHHHHHhhhcccCC-CCC-CCcccHHHHHHHHHH-----hchhhhHHHHHHHHHhhcCCCCcceeccccccccc
Q 017306 116 VTDRLVLLFPKIDV-NPA-DGYINEDELTDWNMQ-----QAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (374)
Q Consensus 116 ~~~~l~~~F~~~D~-d~~-dG~Is~~El~~~l~~-----~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 182 (374)
....++.+|..+|. | | +|.|+..||..++.. ++...+...+..+++.+|.+++|.|+|+||+.++.
T Consensus 6 ~~~~l~~~F~~~D~~d-g~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~ 78 (94)
T cd05031 6 AMESLILTFHRYAGKD-GDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVA 78 (94)
T ss_pred HHHHHHHHHHHHhccC-CCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence 46788999999997 8 8 699999999999986 35567888999999999999999999999998765
No 56
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.68 E-value=5e-08 Score=76.63 Aligned_cols=57 Identities=37% Similarity=0.456 Sum_probs=50.9
Q ss_pred hHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 286 APARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 286 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
..+..+|..+|+|+||.||.+||..+. +. .....+..+|..+|.|+||.||++||..
T Consensus 48 ~~l~w~F~~lD~d~DG~Ls~~EL~~~~--l~-----~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~ 104 (116)
T cd00252 48 DPVGWMFNQLDGNYDGKLSHHELAPIR--LD-----PNEHCIKPFFESCDLDKDGSISLDEWCY 104 (116)
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHH--cc-----chHHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 478999999999999999999999886 32 2366788999999999999999999999
No 57
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.67 E-value=4.7e-08 Score=73.44 Aligned_cols=72 Identities=18% Similarity=0.238 Sum_probs=58.8
Q ss_pred chhHHHHHhhhhcCC--CCCCCccHHHHHHhhcc-CCCC-ChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 017306 194 DMGWWKEEHFNASDA--DGDGLLNLTEFNDFLHP-ADTK-NPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLV 266 (374)
Q Consensus 194 ~~~~~~~~~F~~~D~--d~dG~Is~~E~~~~l~~-~~~~-~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~ 266 (374)
..+.++. +|..+|+ |++|.|+.+||..++.. .+.. ....+...++.++..+|.+++|.|+|++|+.++....
T Consensus 6 ~~~~l~~-~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~ 81 (88)
T cd00213 6 AIETIID-VFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLA 81 (88)
T ss_pred HHHHHHH-HHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHH
Confidence 4566787 9999999 89999999999999975 3310 0124578899999999999999999999999776643
No 58
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.66 E-value=6.7e-08 Score=72.44 Aligned_cols=71 Identities=23% Similarity=0.314 Sum_probs=56.8
Q ss_pred chhHHHHHhhhh-cCCCCCC-CccHHHHHHhhccCCCC--ChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 194 DMGWWKEEHFNA-SDADGDG-LLNLTEFNDFLHPADTK--NPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 194 ~~~~~~~~~F~~-~D~d~dG-~Is~~E~~~~l~~~~~~--~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
.+..+.. +|.. +|.+|+| +||.+||+.++...... ........++.+++.+|.|+||.|+|+||+.++...
T Consensus 7 ~i~~l~~-~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 7 CIESLIA-VFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHH-HHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 3455777 9999 7888986 99999999999865310 023456789999999999999999999999977654
No 59
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.62 E-value=6.2e-08 Score=65.55 Aligned_cols=52 Identities=31% Similarity=0.342 Sum_probs=46.3
Q ss_pred CCCCccHHHHHHhhccCCCCChh-hhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 210 GDGLLNLTEFNDFLHPADTKNPK-LILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 210 ~dG~Is~~E~~~~l~~~~~~~~~-~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
.+|.|+.++|+.+|..++ .. +++.++..+|..+|.|++|.|+|+||+.++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g---~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLG---IKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTT---SSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhC---CCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 479999999999997666 35 88999999999999999999999999997753
No 60
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.58 E-value=1.6e-07 Score=73.78 Aligned_cols=60 Identities=23% Similarity=0.183 Sum_probs=51.9
Q ss_pred hhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 017306 195 MGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262 (374)
Q Consensus 195 ~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l 262 (374)
...+.. +|..+|.|+||.||.+||..+. +. .....+..+|..+|.|+||.||++||..++
T Consensus 47 ~~~l~w-~F~~lD~d~DG~Ls~~EL~~~~--l~-----~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 47 KDPVGW-MFNQLDGNYDGKLSHHELAPIR--LD-----PNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHH-HHHHHCCCCCCcCCHHHHHHHH--cc-----chHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 455777 9999999999999999999876 22 235667889999999999999999999987
No 61
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.58 E-value=3.8e-08 Score=66.63 Aligned_cols=50 Identities=22% Similarity=0.319 Sum_probs=46.9
Q ss_pred CCcccHHHHHHHHHHhchh-hhHHHHHHHHHhhcCCCCcceeccccccccc
Q 017306 133 DGYINEDELTDWNMQQAER-DVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (374)
Q Consensus 133 dG~Is~~El~~~l~~~~~~-~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 182 (374)
+|.|+.++|..+|..++.. .+..++..+|..+|.|++|.|+|+||+.++.
T Consensus 2 ~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~ 52 (54)
T PF13833_consen 2 DGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ 52 (54)
T ss_dssp SSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred cCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence 7999999999999888988 9999999999999999999999999998753
No 62
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.57 E-value=5.9e-08 Score=72.92 Aligned_cols=65 Identities=20% Similarity=0.194 Sum_probs=57.1
Q ss_pred HHHHHhhhcccCC--CCCCCcccHHHHHHHHHH-hchhh----hHHHHHHHHHhhcCCCCcceeccccccccc
Q 017306 117 TDRLVLLFPKIDV--NPADGYINEDELTDWNMQ-QAERD----VMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (374)
Q Consensus 117 ~~~l~~~F~~~D~--d~~dG~Is~~El~~~l~~-~~~~~----~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 182 (374)
.+.++.+|..+|+ + ++|.|+.+||..+++. ++... +...+..+|..+|.+++|.|+|+||+.++.
T Consensus 7 ~~~l~~~F~~~D~~~~-~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~ 78 (88)
T cd00213 7 IETIIDVFHKYSGKEG-DKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIG 78 (88)
T ss_pred HHHHHHHHHHHhhccC-CCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHH
Confidence 5678899999999 9 9999999999999986 44433 478899999999999999999999998765
No 63
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.53 E-value=3.3e-07 Score=63.11 Aligned_cols=59 Identities=34% Similarity=0.572 Sum_probs=53.6
Q ss_pred HHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 288 ARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 288 ~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
+..+|..+|.+++|.|+..|+..+++.++.. .+...+..++..+|.+++|.|++++|+.
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~ef~~ 60 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEG---LSEEEIDEMIREVDKDGDGKIDFEEFLE 60 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC---CCHHHHHHHHHHhCCCCCCeEeHHHHHH
Confidence 4678999999999999999999999988533 6788899999999999999999999987
No 64
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.52 E-value=2.3e-07 Score=63.95 Aligned_cols=61 Identities=34% Similarity=0.505 Sum_probs=54.5
Q ss_pred HHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 017306 198 WKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262 (374)
Q Consensus 198 ~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l 262 (374)
++. +|..+|.+++|.|+.+|+..++...+ ...+...+..++..+|.+++|.|++++|+..+
T Consensus 2 ~~~-~f~~~d~~~~g~l~~~e~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LRE-AFRLFDKDGDGTISADELKAALKSLG---EGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHH-HHHHhCCCCCCcCcHHHHHHHHHHhC---CCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 455 89999999999999999999998876 56778889999999999999999999998754
No 65
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.45 E-value=5.8e-07 Score=75.11 Aligned_cols=67 Identities=27% Similarity=0.462 Sum_probs=58.2
Q ss_pred HHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhcccc
Q 017306 287 PARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSAIFT 360 (374)
Q Consensus 287 ~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~~~ 360 (374)
.+..+|+.+|.+.||+|+..||+.+|.+++.. .+.--++.+|+..|.|.||+||+-||+= .|....+
T Consensus 100 ~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgap---QTHL~lK~mikeVded~dgklSfreflL----Ifrkaaa 166 (244)
T KOG0041|consen 100 DAESMFKQYDEDRDGFIDLMELKRMMEKLGAP---QTHLGLKNMIKEVDEDFDGKLSFREFLL----IFRKAAA 166 (244)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHHHhCCc---hhhHHHHHHHHHhhcccccchhHHHHHH----HHHHHhc
Confidence 67789999999999999999999999999633 5666789999999999999999999998 5555444
No 66
>PF14658 EF-hand_9: EF-hand domain
Probab=98.36 E-value=9e-07 Score=61.20 Aligned_cols=62 Identities=21% Similarity=0.308 Sum_probs=56.1
Q ss_pred hhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCC-CcccHHHHHHHHHhh
Q 017306 202 HFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRD-GKVNFKEFFHGLFDL 265 (374)
Q Consensus 202 ~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~d-G~Is~~EF~~~l~~~ 265 (374)
+|.+||+++.|.|...++..+|+..+. ....+..++.+.+.+|+++. |.|+++.|+..|..+
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~--~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~w 65 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTG--RSPEESELQDLINELDPEGRDGSVNFDTFLAIMRDW 65 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcC--CCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHHh
Confidence 899999999999999999999999885 35677789999999999988 999999999988654
No 67
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.34 E-value=1.4e-06 Score=65.35 Aligned_cols=70 Identities=16% Similarity=0.183 Sum_probs=56.2
Q ss_pred hhHHHHHhhhhcCCC--CCCCccHHHHHHhhccCCCCChhhh----HHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhh
Q 017306 195 MGWWKEEHFNASDAD--GDGLLNLTEFNDFLHPADTKNPKLI----LWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVR 267 (374)
Q Consensus 195 ~~~~~~~~F~~~D~d--~dG~Is~~E~~~~l~~~~~~~~~~~----~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~ 267 (374)
+..+.. .|..|+.. ++|.|+.+||+.++....+ ..++ +..++.+|+.+|.|++|.|+|+||+..+.....
T Consensus 7 i~~~~~-~f~~y~~~~~~~~~Is~~El~~ll~~~~g--~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~~~ 82 (88)
T cd05030 7 IETIIN-VFHQYSVRKGHPDTLYKKEFKQLVEKELP--NFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKVGV 82 (88)
T ss_pred HHHHHH-HHHHHhccCCCcccCCHHHHHHHHHHHhh--HhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHHH
Confidence 344555 89999866 4899999999999974321 3344 788999999999999999999999998776544
No 68
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.33 E-value=9.9e-07 Score=66.11 Aligned_cols=69 Identities=20% Similarity=0.310 Sum_probs=56.1
Q ss_pred hHHHHHhhhhccC--CCCccCHHhHHHHHHhhCCCcccch----HHHHHHHHHHccCCCCCcccHHHHhcCccchhhccc
Q 017306 286 APARQLFGQLDKD--GDGYLSDVELLPIIGKLHPSERYYA----KQQADYIISQADTDKDGRLTLLEMIENPYVFYSAIF 359 (374)
Q Consensus 286 ~~~~~~F~~~D~d--~dG~Is~~El~~~l~~l~~~~~~~~----~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~~ 359 (374)
..+...|..++.. ++|.|+.+||+.++....+ . ..+ +..++.+|+.+|.|++|.|+|+||+. ++....
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g-~-~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~----~~~~~~ 81 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELP-N-FLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLV----LVIKVG 81 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhh-H-hhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHH----HHHHHH
Confidence 4667889999866 4799999999999975431 1 234 88999999999999999999999999 666655
Q ss_pred c
Q 017306 360 T 360 (374)
Q Consensus 360 ~ 360 (374)
.
T Consensus 82 ~ 82 (88)
T cd05030 82 V 82 (88)
T ss_pred H
Confidence 4
No 69
>KOG2562 consensus Protein phosphatase 2 regulatory subunit [RNA processing and modification]
Probab=98.32 E-value=4.1e-06 Score=78.78 Aligned_cols=211 Identities=17% Similarity=0.167 Sum_probs=143.5
Q ss_pred hhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccCCCCC-----Cccc---
Q 017306 122 LLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNN-----SFGY--- 193 (374)
Q Consensus 122 ~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~-----~~~~--- 193 (374)
..|.+++.+ ..|.|+...|...-... .......+.+++...+..+.|.+.-.+|...+........ ....
T Consensus 143 ~~f~k~~~d-~~g~it~~~Fi~~~~~~-~~l~~t~~~~~v~~l~~~~~~yl~q~df~~~Lqeli~Thpl~~l~~~pEf~~ 220 (493)
T KOG2562|consen 143 STFRKIDGD-DTGHITRDKFINYWMRG-LMLTHTRLEQFVNLLIQAGCSYLRQDDFKPYLQELIATHPLEFLDEEPEFQE 220 (493)
T ss_pred hhhhhhccC-cCCceeHHHHHHHHHhh-hhHHHHHHHHHHHHHhccCccceeccccHHHHHHHHhcCCchhhccChhHHH
Confidence 688999999 99999999997643322 2345567888999999999999988888766532221111 0011
Q ss_pred --chhHHHHHhhhhcCCCCCCCccHHHHHHh--hccC---CC--CChhh----hH---HHHHHHHHHhcCCCCCcccHHH
Q 017306 194 --DMGWWKEEHFNASDADGDGLLNLTEFNDF--LHPA---DT--KNPKL----IL---WLSKEEVRERDSDRDGKVNFKE 257 (374)
Q Consensus 194 --~~~~~~~~~F~~~D~d~dG~Is~~E~~~~--l~~~---~~--~~~~~----~~---~~~~~l~~~~D~d~dG~Is~~E 257 (374)
..-.+.+ +|-.++.-++|.|+..|+..- +..+ .. ..++. +- ..+-..|-.+|+|.||.|+-++
T Consensus 221 ~Y~~tvi~r-IFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~ 299 (493)
T KOG2562|consen 221 RYAETVIQR-IFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKED 299 (493)
T ss_pred HHHHHHhhh-hheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHH
Confidence 1122344 899999999999999998752 1111 00 00000 00 1122236678999999999998
Q ss_pred HHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhh----hhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHH
Q 017306 258 FFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFG----QLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQ 333 (374)
Q Consensus 258 F~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~----~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~ 333 (374)
....-.. .....-+.++|. .+=.-.+|.++-.+|.-.+-++ +..-+..-+++.|+-
T Consensus 300 L~ry~d~-----------------tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~---e~k~t~~SleYwFrc 359 (493)
T KOG2562|consen 300 LKRYGDH-----------------TLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAE---EDKDTPASLEYWFRC 359 (493)
T ss_pred HHHHhcc-----------------chhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHh---ccCCCccchhhheee
Confidence 7763322 222345677887 4456678999999999888776 334567789999999
Q ss_pred ccCCCCCcccHHHHhcCccchhhccc
Q 017306 334 ADTDKDGRLTLLEMIENPYVFYSAIF 359 (374)
Q Consensus 334 ~D~n~dG~Is~~EFl~~~~~f~~~~~ 359 (374)
+|.+++|.|+..|+-- ||..+.
T Consensus 360 lDld~~G~Lt~~el~~----fyeeq~ 381 (493)
T KOG2562|consen 360 LDLDGDGILTLNELRY----FYEEQL 381 (493)
T ss_pred eeccCCCcccHHHHHH----HHHHHH
Confidence 9999999999999776 666543
No 70
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.32 E-value=3.1e-06 Score=88.75 Aligned_cols=136 Identities=19% Similarity=0.280 Sum_probs=101.5
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhh----hHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhh
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKL----ILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVR 267 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~----~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~ 267 (374)
......+.. +|+.||++.+|.++..+|+.+|+.+|+.-|.+ ++..++.++...|++.+|.|+..+|+.+|...-.
T Consensus 2249 Ee~L~EFs~-~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ET 2327 (2399)
T KOG0040|consen 2249 EEQLKEFSM-MFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKET 2327 (2399)
T ss_pred HHHHHHHHH-HHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhccc
Confidence 344455666 99999999999999999999999998754322 2347899999999999999999999998876533
Q ss_pred ccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHH----HccCC----CC
Q 017306 268 NYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIIS----QADTD----KD 339 (374)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~----~~D~n----~d 339 (374)
. .......+..+|+.+|. +.-+++..++..-| ++++++..++ .+|+. .-
T Consensus 2328 e------------NI~s~~eIE~AfraL~a-~~~yvtke~~~~~l----------treqaefc~s~m~~~~e~~~~~s~q 2384 (2399)
T KOG0040|consen 2328 E------------NILSSEEIEDAFRALDA-GKPYVTKEELYQNL----------TREQAEFCMSKMKPYAETSSGRSDQ 2384 (2399)
T ss_pred c------------cccchHHHHHHHHHhhc-CCccccHHHHHhcC----------CHHHHHHHHHHhhhhcccccCCCcc
Confidence 2 23334589999999999 77899999986543 4445444444 44542 23
Q ss_pred CcccHHHHhcCc
Q 017306 340 GRLTLLEMIENP 351 (374)
Q Consensus 340 G~Is~~EFl~~~ 351 (374)
+.|.|.+|++.+
T Consensus 2385 ~~l~y~dfv~sl 2396 (2399)
T KOG0040|consen 2385 VALDYKDFVNSL 2396 (2399)
T ss_pred ccccHHHHHHHH
Confidence 468888888743
No 71
>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=98.31 E-value=2.1e-06 Score=89.93 Aligned_cols=135 Identities=16% Similarity=0.267 Sum_probs=106.6
Q ss_pred HHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhh-------HHHHHHHHHhhcCCCCcceecccccccccccCCCCC
Q 017306 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDV-------MHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNN 189 (374)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~-------~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~ 189 (374)
-.++.-+|+.||++ ++|.++..+|+.+|+++|..++ ...++.++..+|++.+|.|+..+|+.+|..... .+
T Consensus 2252 L~EFs~~fkhFDke-k~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ET-eN 2329 (2399)
T KOG0040|consen 2252 LKEFSMMFKHFDKE-KNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKET-EN 2329 (2399)
T ss_pred HHHHHHHHHHhchh-hccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhccc-cc
Confidence 56788999999999 9999999999999999988763 236899999999999999999999999986554 22
Q ss_pred CcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCC----CCCcccHHHHHHHHH
Q 017306 190 SFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSD----RDGKVNFKEFFHGLF 263 (374)
Q Consensus 190 ~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d----~dG~Is~~EF~~~l~ 263 (374)
.... +.+.. +|+.+|. +..+|+.+++..-|. ++..+-.+..|-..+++. --+.+.|.+|+..++
T Consensus 2330 I~s~--~eIE~-AfraL~a-~~~yvtke~~~~~lt------reqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~sl~ 2397 (2399)
T KOG0040|consen 2330 ILSS--EEIED-AFRALDA-GKPYVTKEELYQNLT------REQAEFCMSKMKPYAETSSGRSDQVALDYKDFVNSLF 2397 (2399)
T ss_pred ccch--HHHHH-HHHHhhc-CCccccHHHHHhcCC------HHHHHHHHHHhhhhcccccCCCccccccHHHHHHHHh
Confidence 2222 36777 9999998 899999999987665 345555555566666653 224589999998764
No 72
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.20 E-value=1.5e-06 Score=50.27 Aligned_cols=28 Identities=36% Similarity=0.609 Sum_probs=23.8
Q ss_pred HHHHhhhhccCCCCccCHHhHHHHHHhh
Q 017306 288 ARQLFGQLDKDGDGYLSDVELLPIIGKL 315 (374)
Q Consensus 288 ~~~~F~~~D~d~dG~Is~~El~~~l~~l 315 (374)
++.+|+.+|+|+||+|+.+||..++++|
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 5788999999999999999999888754
No 73
>PF14658 EF-hand_9: EF-hand domain
Probab=98.18 E-value=1.5e-06 Score=60.08 Aligned_cols=60 Identities=15% Similarity=0.168 Sum_probs=56.3
Q ss_pred hhhcccCCCCCCCcccHHHHHHHHHHhch-hhhHHHHHHHHHhhcCCCC-cceeccccccccc
Q 017306 122 LLFPKIDVNPADGYINEDELTDWNMQQAE-RDVMHRTQREMETHDKNKD-GFVSFAEYEPPTW 182 (374)
Q Consensus 122 ~~F~~~D~d~~dG~Is~~El~~~l~~~~~-~~~~~~~~~~~~~~D~d~d-G~Is~~EF~~~~~ 182 (374)
.+|..+|.+ +.|.|...++..+|+.++. .+...+++.+.+.+|+++. |.|+|+.|+..|.
T Consensus 2 ~~F~~fD~~-~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 2 TAFDAFDTQ-KTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMR 63 (66)
T ss_pred cchhhcCCc-CCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence 479999999 9999999999999999988 8889999999999999998 9999999998875
No 74
>KOG0041 consensus Predicted Ca2+-binding protein, EF-Hand protein superfamily [General function prediction only]
Probab=98.17 E-value=6.6e-06 Score=68.91 Aligned_cols=101 Identities=21% Similarity=0.317 Sum_probs=73.9
Q ss_pred cchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcC
Q 017306 193 YDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDE 272 (374)
Q Consensus 193 ~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~ 272 (374)
.++..+.. +|+.||.+.||+|+..||+.+|..+|. ..+.--++.|++..|.|.||+|+|.||+-.+...... .
T Consensus 96 kqIk~~~~-~Fk~yDe~rDgfIdl~ELK~mmEKLga---pQTHL~lK~mikeVded~dgklSfreflLIfrkaaag-E-- 168 (244)
T KOG0041|consen 96 KQIKDAES-MFKQYDEDRDGFIDLMELKRMMEKLGA---PQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAG-E-- 168 (244)
T ss_pred HHHHHHHH-HHHHhcccccccccHHHHHHHHHHhCC---chhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhcc-c--
Confidence 34566777 999999999999999999999999984 5566678999999999999999999999755443321 0
Q ss_pred CCCCCCCCCCCCchHHHHH--hhhhccCCCCccCHHhHH
Q 017306 273 GHNSSHPSDDTMDAPARQL--FGQLDKDGDGYLSDVELL 309 (374)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~--F~~~D~d~dG~Is~~El~ 309 (374)
... ...+..+ -...|..+-|.....-|-
T Consensus 169 --------L~~-ds~~~~LAr~~eVDVskeGV~GAknFF 198 (244)
T KOG0041|consen 169 --------LQE-DSGLLRLARLSEVDVSKEGVSGAKNFF 198 (244)
T ss_pred --------ccc-chHHHHHHHhcccchhhhhhhhHHHHH
Confidence 011 1122222 244788888887766654
No 75
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.02 E-value=1.5e-05 Score=59.21 Aligned_cols=70 Identities=14% Similarity=0.285 Sum_probs=54.9
Q ss_pred hHHHHHhhhhccCCCCccCHHhHHHHHHhhCCC--cccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhcccc
Q 017306 286 APARQLFGQLDKDGDGYLSDVELLPIIGKLHPS--ERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSAIFT 360 (374)
Q Consensus 286 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~--~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~~~ 360 (374)
..+...|..+-.+ .|.|+..||+.++.+--|. .....+..++.+|+.+|.|+||.|+|.||+. +++.+..
T Consensus 8 ~~lI~~FhkYaG~-~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~----Lv~~l~~ 79 (91)
T cd05024 8 EKMMLTFHKFAGE-KNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFS----LIAGLLI 79 (91)
T ss_pred HHHHHHHHHHcCC-CCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHH----HHHHHHH
Confidence 3567788888743 5699999999999754322 1123578899999999999999999999999 7777654
No 76
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=98.01 E-value=5.1e-06 Score=48.07 Aligned_cols=28 Identities=25% Similarity=0.361 Sum_probs=22.7
Q ss_pred HHhhhcccCCCCCCCcccHHHHHHHHHHh
Q 017306 120 LVLLFPKIDVNPADGYINEDELTDWNMQQ 148 (374)
Q Consensus 120 l~~~F~~~D~d~~dG~Is~~El~~~l~~~ 148 (374)
++.+|+.+|+| +||+|+.+||..+++.+
T Consensus 2 ~~~~F~~~D~d-~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 2 LKEAFREFDKD-GDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHSTT-SSSEEEHHHHHHHHHHT
T ss_pred HHHHHHHHCCC-CCCcCCHHHHHHHHHhC
Confidence 56788888888 88888888888887653
No 77
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.95 E-value=1e-05 Score=62.30 Aligned_cols=68 Identities=22% Similarity=0.329 Sum_probs=56.9
Q ss_pred cCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceeccccccccc
Q 017306 107 YLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (374)
Q Consensus 107 ~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 182 (374)
.|++++ +.++..+|..+|. ++|.|+-++...++...+. +.+.+.++|...|.+++|.++++||+.++.
T Consensus 3 ~ls~~e----~~~y~~~F~~l~~--~~g~isg~~a~~~f~~S~L--~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~ 70 (104)
T PF12763_consen 3 KLSPEE----KQKYDQIFQSLDP--QDGKISGDQAREFFMKSGL--PRDVLAQIWNLADIDNDGKLDFEEFAIAMH 70 (104)
T ss_dssp --SCCH----HHHHHHHHHCTSS--STTEEEHHHHHHHHHHTTS--SHHHHHHHHHHH-SSSSSEEEHHHHHHHHH
T ss_pred CCCHHH----HHHHHHHHHhcCC--CCCeEeHHHHHHHHHHcCC--CHHHHHHHHhhhcCCCCCcCCHHHHHHHHH
Confidence 356777 6889999999984 5899999999999887764 568899999999999999999999998764
No 78
>KOG0751 consensus Mitochondrial aspartate/glutamate carrier protein Aralar/Citrin (contains EF-hand Ca2+-binding domains) [Energy production and conversion]
Probab=97.91 E-value=4.2e-05 Score=72.47 Aligned_cols=196 Identities=17% Similarity=0.229 Sum_probs=115.2
Q ss_pred ccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccCCCCCC---------------
Q 017306 126 KIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNS--------------- 190 (374)
Q Consensus 126 ~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~--------------- 190 (374)
..|.- +||-||.+||..+=.-+.. + .......|..+|..++|.+|+++|...+.........
T Consensus 82 iaD~t-KDglisf~eF~afe~~lC~-p-Dal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg~ 158 (694)
T KOG0751|consen 82 IADQT-KDGLISFQEFRAFESVLCA-P-DALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFGD 158 (694)
T ss_pred hhhhc-ccccccHHHHHHHHhhccC-c-hHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhhh
Confidence 34555 6667777776654222221 1 2333455666777777777777666655432221000
Q ss_pred ---------------cccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHH-HHhcCCCCCccc
Q 017306 191 ---------------FGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEV-RERDSDRDGKVN 254 (374)
Q Consensus 191 ---------------~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~-~~~D~d~dG~Is 254 (374)
.....+.-++ +|+..|+.++|.||.=+|+..+.... ..+....++..+ .....+...++|
T Consensus 159 ~~~r~~ny~~f~Q~lh~~~~E~~~q-afr~~d~~~ng~is~Ldfq~imvt~~---~h~lt~~v~~nlv~vagg~~~H~vS 234 (694)
T KOG0751|consen 159 IRKRHLNYAEFTQFLHEFQLEHAEQ-AFREKDKAKNGFISVLDFQDIMVTIR---IHLLTPFVEENLVSVAGGNDSHQVS 234 (694)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHH-HHHHhcccCCCeeeeechHhhhhhhh---hhcCCHHHhhhhhhhcCCCCccccc
Confidence 0111122333 78888888888888888887776544 233333344333 334444445577
Q ss_pred HHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhh-ccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHH
Q 017306 255 FKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQL-DKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQ 333 (374)
Q Consensus 255 ~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~-D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~ 333 (374)
+..|.. ....+.+ .+.+++.+..+ +.-+|-.++.+++...-..++ -.+.-+++.+|..
T Consensus 235 f~yf~a-fnslL~~----------------melirk~y~s~~~~~~d~~~~kdq~~~~a~~~~----q~t~~~idilf~l 293 (694)
T KOG0751|consen 235 FSYFNA-FNSLLNN----------------MELIRKIYSSLAGTRKDVEVTKDQFSLAAQTSK----QVTPLEIDILFQL 293 (694)
T ss_pred hHHHHH-HHHHHhh----------------HHHHHHHHHHhcccccchhhhHHHHHHHHHHhh----ccCchhhhhhhhh
Confidence 776665 2222221 23567777654 556777899999988777663 1467788999999
Q ss_pred ccCCC-CCcccHHHHhc
Q 017306 334 ADTDK-DGRLTLLEMIE 349 (374)
Q Consensus 334 ~D~n~-dG~Is~~EFl~ 349 (374)
.|... -|+|++.++.+
T Consensus 294 a~~~~~~~~ltl~Di~~ 310 (694)
T KOG0751|consen 294 ADLYHPMGRLTLADIER 310 (694)
T ss_pred hhcccccccccHHHHHh
Confidence 88664 57999999887
No 79
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.90 E-value=5e-05 Score=72.41 Aligned_cols=53 Identities=30% Similarity=0.552 Sum_probs=47.1
Q ss_pred CCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 281 DDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 281 ~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
..+....++.+|+.+|.|+||.|+.+||.. ++.+|..+|.|+||.|+++||..
T Consensus 329 ~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~----------------~~~~F~~~D~d~DG~Is~eEf~~ 381 (391)
T PRK12309 329 GEAFTHAAQEIFRLYDLDGDGFITREEWLG----------------SDAVFDALDLNHDGKITPEEMRA 381 (391)
T ss_pred cChhhHHHHHHHHHhCCCCCCcCcHHHHHH----------------HHHHHHHhCCCCCCCCcHHHHHH
Confidence 355667889999999999999999999941 46899999999999999999999
No 80
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.87 E-value=1.5e-05 Score=46.97 Aligned_cols=29 Identities=41% Similarity=0.668 Sum_probs=25.2
Q ss_pred HHHHHhhhhccCCCCccCHHhHHHHHH-hh
Q 017306 287 PARQLFGQLDKDGDGYLSDVELLPIIG-KL 315 (374)
Q Consensus 287 ~~~~~F~~~D~d~dG~Is~~El~~~l~-~l 315 (374)
+++.+|+.+|.|++|+|+.+||..+|+ ++
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~l 30 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSL 30 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhc
Confidence 367899999999999999999999998 56
No 81
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.83 E-value=1.6e-05 Score=46.94 Aligned_cols=30 Identities=30% Similarity=0.396 Sum_probs=25.7
Q ss_pred HHHhhhcccCCCCCCCcccHHHHHHHHH-Hhc
Q 017306 119 RLVLLFPKIDVNPADGYINEDELTDWNM-QQA 149 (374)
Q Consensus 119 ~l~~~F~~~D~d~~dG~Is~~El~~~l~-~~~ 149 (374)
+++.+|..+|.| ++|+|+.+||..+|+ ++|
T Consensus 1 ~l~~~F~~~D~d-~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKD-GDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TT-SSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCC-CCCcCcHHHHHHHHHHhcC
Confidence 477999999999 999999999999998 454
No 82
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.82 E-value=5e-05 Score=56.44 Aligned_cols=69 Identities=20% Similarity=0.248 Sum_probs=52.3
Q ss_pred hhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCC--CChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 195 MGWWKEEHFNASDADGDGLLNLTEFNDFLHPADT--KNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 195 ~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~--~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
+..+.. +|..|- .+.|.++..||+.++...-. ......+..++.+|+..|.|+||.|+|.||+..+...
T Consensus 7 i~~lI~-~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 7 MEKMML-TFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHH-HHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 344555 899987 45679999999999864321 0112356789999999999999999999999976554
No 83
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.73 E-value=7.8e-05 Score=57.38 Aligned_cols=67 Identities=21% Similarity=0.246 Sum_probs=56.1
Q ss_pred cccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 191 FGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 191 ~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
...+...+.. +|...|. ++|.|+.++.+.++... .+....+.+++...|.+++|+++++||+-+|.-
T Consensus 5 s~~e~~~y~~-~F~~l~~-~~g~isg~~a~~~f~~S-----~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 5 SPEEKQKYDQ-IFQSLDP-QDGKISGDQAREFFMKS-----GLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp SCCHHHHHHH-HHHCTSS-STTEEEHHHHHHHHHHT-----TSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHH-HHHhcCC-CCCeEeHHHHHHHHHHc-----CCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence 3455667777 9999985 68999999999998875 477788999999999999999999999987654
No 84
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.70 E-value=1.3e-05 Score=62.86 Aligned_cols=60 Identities=32% Similarity=0.459 Sum_probs=44.9
Q ss_pred chHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 285 DAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 285 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
...+...|..+|.|+||.|+..|++.+...+.+ .+.-+..++..+|.|+||.||+.|+..
T Consensus 53 ~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~-----~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 53 KRVVHWKFCQLDRNKDGVLDRSELKPLRRPLMP-----PEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHHHHHHHH--T-SSEE-TTTTGGGGSTTST-----TGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhHhhhcCCCCCccCHHHHHHHHHHHhh-----hHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 357788899999999999999999998765532 244578899999999999999999864
No 85
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.69 E-value=3.7e-05 Score=42.76 Aligned_cols=23 Identities=39% Similarity=0.622 Sum_probs=17.9
Q ss_pred HHHhhhhccCCCCccCHHhHHHH
Q 017306 289 RQLFGQLDKDGDGYLSDVELLPI 311 (374)
Q Consensus 289 ~~~F~~~D~d~dG~Is~~El~~~ 311 (374)
+.+|+.+|.|+||.||.+|+..+
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 56788888888888888888765
No 86
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.61 E-value=0.00039 Score=69.29 Aligned_cols=137 Identities=24% Similarity=0.330 Sum_probs=99.9
Q ss_pred hhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhh---c----------
Q 017306 202 HFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVR---N---------- 268 (374)
Q Consensus 202 ~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~---~---------- 268 (374)
.|..+ +-+.|+|+.+.-+.++...+ +....+.+|+...|.|+||+++..||.-+|.-... .
T Consensus 21 qF~~L-kp~~gfitg~qArnfflqS~-----LP~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lkLqG~~lP~~LPPs 94 (1118)
T KOG1029|consen 21 QFGQL-KPGQGFITGDQARNFFLQSG-----LPTPVLAQIWALSDLDKDGRMDIREFSIAMKLIKLKLQGIQLPPVLPPS 94 (1118)
T ss_pred HHhcc-CCCCCccchHhhhhhHHhcC-----CChHHHHHHHHhhhcCccccchHHHHHHHHHHHHHHhcCCcCCCCCChH
Confidence 45544 46789999999999887654 55667888999999999999999999765432211 0
Q ss_pred ---------------cCcCCC--------------------------------------CC-------------------
Q 017306 269 ---------------YDDEGH--------------------------------------NS------------------- 276 (374)
Q Consensus 269 ---------------~~~~~~--------------------------------------~~------------------- 276 (374)
++.... +.
T Consensus 95 ll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~~spl~~~ss~se~ 174 (1118)
T KOG1029|consen 95 LLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTSNSPLPHDSSVSEG 174 (1118)
T ss_pred HhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCCCCcchhhc
Confidence 000000 00
Q ss_pred -----------CCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHH
Q 017306 277 -----------SHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLL 345 (374)
Q Consensus 277 -----------~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~ 345 (374)
+|-.+....-..+.+|+.+|+..+|+||...-+.+|...+ ++..++.+|+...|.|+||+|+-+
T Consensus 175 ~~~~~s~~q~~eWAVp~~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~-----Lpq~~LA~IW~LsDvd~DGkL~~d 249 (1118)
T KOG1029|consen 175 RPSIESVNQLEEWAVPQHNKLKYRQLFNALDKTRSGYLSGQQARSALGQSG-----LPQNQLAHIWTLSDVDGDGKLSAD 249 (1118)
T ss_pred CccchhhhhhhhccccchhhhHHHHHhhhcccccccccccHHHHHHHHhcC-----CchhhHhhheeeeccCCCCcccHH
Confidence 0001111123567899999999999999999999986553 678899999999999999999999
Q ss_pred HHhc
Q 017306 346 EMIE 349 (374)
Q Consensus 346 EFl~ 349 (374)
||+=
T Consensus 250 Efil 253 (1118)
T KOG1029|consen 250 EFIL 253 (1118)
T ss_pred HHHH
Confidence 9986
No 87
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.59 E-value=4.9e-05 Score=42.30 Aligned_cols=25 Identities=28% Similarity=0.389 Sum_probs=19.6
Q ss_pred HHhhhcccCCCCCCCcccHHHHHHHH
Q 017306 120 LVLLFPKIDVNPADGYINEDELTDWN 145 (374)
Q Consensus 120 l~~~F~~~D~d~~dG~Is~~El~~~l 145 (374)
|+.+|..+|.| +||.||.+||.+++
T Consensus 1 l~~~F~~~D~d-~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTD-GDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTT-SSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCC-CCCcCCHHHHHHHC
Confidence 45678888888 88888888887753
No 88
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.57 E-value=0.00015 Score=47.31 Aligned_cols=49 Identities=22% Similarity=0.297 Sum_probs=39.5
Q ss_pred ccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhc
Q 017306 302 YLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSA 357 (374)
Q Consensus 302 ~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~ 357 (374)
.+|..|++.+|+.+ ....++..+..+|+.+|++++|.|.-+||.. ||..
T Consensus 1 kmsf~Evk~lLk~~---NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~----Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMM---NIEMDDEYARQLFQECDKSQSGRLEGEEFEE----FYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHT---T----HHHHHHHHHHH-SSSSSEBEHHHHHH----HHHH
T ss_pred CCCHHHHHHHHHHH---ccCcCHHHHHHHHHHhcccCCCCccHHHHHH----HHHH
Confidence 36889999999988 4457899999999999999999999999999 7753
No 89
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.56 E-value=0.00017 Score=68.91 Aligned_cols=54 Identities=30% Similarity=0.360 Sum_probs=46.2
Q ss_pred hHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 017306 196 GWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLV 266 (374)
Q Consensus 196 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~ 266 (374)
..++. +|+.+|.|++|.|+.+||.. ++.+|..+|.|+||.|+++||...+....
T Consensus 334 ~~l~~-aF~~~D~dgdG~Is~~E~~~----------------~~~~F~~~D~d~DG~Is~eEf~~~~~~~~ 387 (391)
T PRK12309 334 HAAQE-IFRLYDLDGDGFITREEWLG----------------SDAVFDALDLNHDGKITPEEMRAGLGAAL 387 (391)
T ss_pred HHHHH-HHHHhCCCCCCcCcHHHHHH----------------HHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 34566 99999999999999999942 46799999999999999999999776543
No 90
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=97.54 E-value=5.8e-05 Score=67.94 Aligned_cols=117 Identities=12% Similarity=0.080 Sum_probs=93.8
Q ss_pred CCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHH
Q 017306 209 DGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPA 288 (374)
Q Consensus 209 d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (374)
.+.+.|-..||..-++- ..+ +.+..+|..||.+++|.++|.|.+..+.-.+. +......+
T Consensus 239 ~kg~~igi~efa~~l~v------pvs-d~l~~~f~LFde~~tg~~D~re~v~~lavlc~-------------p~~t~~ii 298 (412)
T KOG4666|consen 239 AKGPDIGIVEFAVNLRV------PVS-DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCG-------------PPVTPVII 298 (412)
T ss_pred ccCCCcceeEeeeeeec------chh-hhhhhhhheecCCCCCcccHHHHhhhheeeeC-------------CCCcHHHH
Confidence 45667777777665542 222 45778999999999999999999998877766 45666788
Q ss_pred HHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 289 ~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
+-+|+.|+.+-||.+...+|.-++.... + ...-.+..+|...+...+|+|++.+|..
T Consensus 299 q~afk~f~v~eDg~~ge~~ls~ilq~~l-g---v~~l~v~~lf~~i~q~d~~ki~~~~f~~ 355 (412)
T KOG4666|consen 299 QYAFKRFSVAEDGISGEHILSLILQVVL-G---VEVLRVPVLFPSIEQKDDPKIYASNFRK 355 (412)
T ss_pred HHHHHhcccccccccchHHHHHHHHHhc-C---cceeeccccchhhhcccCcceeHHHHHH
Confidence 9999999999999999999998887532 2 2344577899999999999999999988
No 91
>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.47 E-value=0.00026 Score=70.47 Aligned_cols=144 Identities=20% Similarity=0.241 Sum_probs=104.2
Q ss_pred CChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccCC-
Q 017306 108 LNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNS- 186 (374)
Q Consensus 108 l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~- 186 (374)
+|+++| .+-...|..+- |+.|+|+-+.-+.++...+. +...+.++|...|.|+||+++..||.-.|.....
T Consensus 10 vT~~Er----~K~~~qF~~Lk--p~~gfitg~qArnfflqS~L--P~~VLaqIWALsDldkDGrmdi~EfSIAmkLi~lk 81 (1118)
T KOG1029|consen 10 VTDEER----QKHDAQFGQLK--PGQGFITGDQARNFFLQSGL--PTPVLAQIWALSDLDKDGRMDIREFSIAMKLIKLK 81 (1118)
T ss_pred cchHHH----HHHHHHHhccC--CCCCccchHhhhhhHHhcCC--ChHHHHHHHHhhhcCccccchHHHHHHHHHHHHHH
Confidence 577774 34445666655 46899999998888877764 4456788899999999999999999754410000
Q ss_pred -------------------------------C-----------------------------------------C------
Q 017306 187 -------------------------------D-----------------------------------------N------ 188 (374)
Q Consensus 187 -------------------------------~-----------------------------------------~------ 188 (374)
. .
T Consensus 82 LqG~~lP~~LPPsll~~~~~~~p~~~p~fg~Gsls~~qpL~~a~p~~m~~s~v~~~Pv~vatvpS~~~~sl~nGplp~~~ 161 (1118)
T KOG1029|consen 82 LQGIQLPPVLPPSLLKQPPRNAPSTWPGFGMGSLSYSQPLPPAAPRRMSSSPVVGPPVSVATVPSSRHNSLPNGPLPPTS 161 (1118)
T ss_pred hcCCcCCCCCChHHhccCCcCCCCCCCccCCCCcCcCCCCCcccccccCCCccCCCCcccccCCCCCCCCCCCCCCCCCC
Confidence 0 0
Q ss_pred ------C--------------------CcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHH
Q 017306 189 ------N--------------------SFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEV 242 (374)
Q Consensus 189 ------~--------------------~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~ 242 (374)
. ......-+++. .|+..|+..+|+||...-+.+|...+ +....+..|+
T Consensus 162 ~spl~~~ss~se~~~~~~s~~q~~eWAVp~~~klKY~Q-lFNa~DktrsG~Lsg~qaR~aL~qS~-----Lpq~~LA~IW 235 (1118)
T KOG1029|consen 162 NSPLPHDSSVSEGRPSIESVNQLEEWAVPQHNKLKYRQ-LFNALDKTRSGYLSGQQARSALGQSG-----LPQNQLAHIW 235 (1118)
T ss_pred CCCCCCCcchhhcCccchhhhhhhhccccchhhhHHHH-HhhhcccccccccccHHHHHHHHhcC-----CchhhHhhhe
Confidence 0 00011123566 99999999999999999999987653 6677788999
Q ss_pred HHhcCCCCCcccHHHHHHHHHhh
Q 017306 243 RERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 243 ~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
...|.|+||+++-+||+-.|.-.
T Consensus 236 ~LsDvd~DGkL~~dEfilam~li 258 (1118)
T KOG1029|consen 236 TLSDVDGDGKLSADEFILAMHLI 258 (1118)
T ss_pred eeeccCCCCcccHHHHHHHHHHH
Confidence 99999999999999999766543
No 92
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=97.32 E-value=0.00017 Score=56.55 Aligned_cols=59 Identities=22% Similarity=0.320 Sum_probs=43.3
Q ss_pred hHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHH
Q 017306 196 GWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFH 260 (374)
Q Consensus 196 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~ 260 (374)
..+.- .|..+|.|+||.|+..|+..+...+. ..+..+..+++..|.|+||.||..|+..
T Consensus 54 ~~~~W-~F~~LD~n~d~~L~~~El~~l~~~l~-----~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 54 RVVHW-KFCQLDRNKDGVLDRSELKPLRRPLM-----PPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp HHHHH-HHHHH--T-SSEE-TTTTGGGGSTTS-----TTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhh-hHhhhcCCCCCccCHHHHHHHHHHHh-----hhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 44555 89999999999999999999887653 2333578899999999999999999975
No 93
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=97.21 E-value=0.00039 Score=72.96 Aligned_cols=225 Identities=17% Similarity=0.156 Sum_probs=161.9
Q ss_pred HHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccCCC----------
Q 017306 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSD---------- 187 (374)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~---------- 187 (374)
..+..+|+.+|.. ++|.|+..+-..++...+. ....+-++|...|..+.|.++..+|...+......
T Consensus 11 ~~~~~~~~~~d~~-~~G~i~g~~a~~f~~~s~L--~~qvl~qiws~~d~~~~g~l~~q~f~~~lrlva~aq~~~~~~~~~ 87 (847)
T KOG0998|consen 11 PLFDQYFKSADPQ-GDGRITGAEAVAFLSKSGL--PDQVLGQIWSLADSSGKGFLNRQGFYAALRLVAQAQSGRELSAKK 87 (847)
T ss_pred chHHHhhhccCcc-cCCcccHHHhhhhhhcccc--chhhhhccccccccccCCccccccccccchHhhhhhcccCcCccc
Confidence 4566889999999 9999999999988887764 45667888999999999999999999776321111
Q ss_pred ----------------------CC-----------CcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhh
Q 017306 188 ----------------------NN-----------SFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLI 234 (374)
Q Consensus 188 ----------------------~~-----------~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~ 234 (374)
.. ....+...+.. +|..+... +|.++.+..+.++... .+.
T Consensus 88 ~~~~~~~pp~~~~~~~~~~~~~~~~~~s~~~~~p~~~~qe~aky~q-~f~s~~p~-~g~~sg~~~~pil~~s-----~Lp 160 (847)
T KOG0998|consen 88 VLPASAVPPPPKISHDTSPPSRPSSSTSAAPFVPAITPQEQAKYDQ-IFRSLSPS-NGLLSGDKAKPILLNS-----KLP 160 (847)
T ss_pred cccccCCCCCCccCccCCCcccCCCCCCCcccCCCCCHHHHHHHHH-HHhccCCC-CCccccchhhhhhhcC-----CCC
Confidence 00 01111223344 67777654 8888888888887754 456
Q ss_pred HHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccC---cCCCCCC----------------------------------
Q 017306 235 LWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYD---DEGHNSS---------------------------------- 277 (374)
Q Consensus 235 ~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~---~~~~~~~---------------------------------- 277 (374)
...+.+++...|.+.+|.++..||...|......+. .......
T Consensus 161 ~~~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~~~l~~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (847)
T KOG0998|consen 161 SDVLGRIWELSDIDKDGNLDRDEFAVAMHLINDLLNGNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASP 240 (847)
T ss_pred hhhhccccccccccccCCCChhhhhhhhhHHHHHhhcccCCCCccCCcccCCcchhcccccCcccccccccccccccccc
Confidence 666778899999999999999999977665443322 0000000
Q ss_pred --------------------------------C--CCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccch
Q 017306 278 --------------------------------H--PSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYA 323 (374)
Q Consensus 278 --------------------------------~--~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~ 323 (374)
+ ...........++|...|.+++|.|+..+...++...| ++
T Consensus 241 ~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~g-----l~ 315 (847)
T KOG0998|consen 241 TTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPKVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLPFG-----LS 315 (847)
T ss_pred cccccccchhcccCCccccccccccccccccccCcccChHHHHHHHHHHHhccccCCCcccccccccccccCC-----CC
Confidence 0 00111123456679999999999999999999986643 67
Q ss_pred HHHHHHHHHHccCCCCCcccHHHHhcCccchhhc
Q 017306 324 KQQADYIISQADTDKDGRLTLLEMIENPYVFYSA 357 (374)
Q Consensus 324 ~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~ 357 (374)
...+.+++...|..+.|.|++.+|.-..+.-...
T Consensus 316 ~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~~~ 349 (847)
T KOG0998|consen 316 KPRLAHVWLLADTQNTGTLSKDEFALAMHLLEQK 349 (847)
T ss_pred hhhhhhhhhhcchhccCcccccccchhhhhhhhh
Confidence 8899999999999999999999988755554444
No 94
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.16 E-value=0.00039 Score=45.36 Aligned_cols=48 Identities=13% Similarity=0.004 Sum_probs=39.2
Q ss_pred cccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceeccccccccc
Q 017306 135 YINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (374)
Q Consensus 135 ~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 182 (374)
.+|..|++.+|+.++......-+..+|+.+|++++|.+..+||..++.
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~ 48 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYK 48 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHH
Confidence 378899999999999999999999999999999999999999987653
No 95
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=97.01 E-value=0.0079 Score=60.66 Aligned_cols=141 Identities=21% Similarity=0.296 Sum_probs=111.2
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCc
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDD 271 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~ 271 (374)
.....|+.. +|...|++++|.++..+...++..+. ..+....+..+|++.+..+++++...+|.........
T Consensus 132 ~~~~~wi~~-~~~~ad~~~~~~~~~~~~~~~~~~~n---~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~---- 203 (746)
T KOG0169|consen 132 SRREHWIHS-IFQEADKNKNGHMSFDEVLDLLKQLN---VQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTK---- 203 (746)
T ss_pred chHHHHHHH-HHHHHccccccccchhhHHHHHHHHH---HhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhcc----
Confidence 344567777 99999999999999999999998776 6788888999999999889999999999985544322
Q ss_pred CCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCC----CCCcccHHHH
Q 017306 272 EGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTD----KDGRLTLLEM 347 (374)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n----~dG~Is~~EF 347 (374)
. ..+..+|..+-.+ .+.++.++|...+.... ++...+.+.+..|++.+-.. ..+.++++-|
T Consensus 204 ------------r-pev~~~f~~~s~~-~~~ls~~~L~~Fl~~~q-~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF 268 (746)
T KOG0169|consen 204 ------------R-PEVYFLFVQYSHG-KEYLSTDDLLRFLEEEQ-GEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGF 268 (746)
T ss_pred ------------C-chHHHHHHHHhCC-CCccCHHHHHHHHHHhc-ccccccHHHHHHHHHHhhhhhhccccceecHHHH
Confidence 1 2677888777444 89999999999998764 45557788899999887644 3466999999
Q ss_pred hcCccchhhccc
Q 017306 348 IENPYVFYSAIF 359 (374)
Q Consensus 348 l~~~~~f~~~~~ 359 (374)
.. |.-+.-
T Consensus 269 ~~----yL~S~~ 276 (746)
T KOG0169|consen 269 TR----YLFSPD 276 (746)
T ss_pred HH----HhcCcc
Confidence 88 655543
No 96
>KOG4666 consensus Predicted phosphate acyltransferase, contains PlsC domain [Lipid transport and metabolism]
Probab=96.99 E-value=0.0069 Score=54.93 Aligned_cols=124 Identities=12% Similarity=0.014 Sum_probs=96.0
Q ss_pred cCCCCcceecccccccccccCCCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHH
Q 017306 165 DKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRE 244 (374)
Q Consensus 165 D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~ 244 (374)
-..+.+.|...||...+... ....++. .|..||.+++|.++.-|-...+.-+.+ +..+...++--|+.
T Consensus 237 r~~kg~~igi~efa~~l~vp---------vsd~l~~-~f~LFde~~tg~~D~re~v~~lavlc~--p~~t~~iiq~afk~ 304 (412)
T KOG4666|consen 237 REAKGPDIGIVEFAVNLRVP---------VSDKLAP-TFMLFDEGTTGNGDYRETVKTLAVLCG--PPVTPVIIQYAFKR 304 (412)
T ss_pred HhccCCCcceeEeeeeeecc---------hhhhhhh-hhheecCCCCCcccHHHHhhhheeeeC--CCCcHHHHHHHHHh
Confidence 34567788888988765532 1255666 999999999999999888777766554 77888899999999
Q ss_pred hcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhh
Q 017306 245 RDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKL 315 (374)
Q Consensus 245 ~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l 315 (374)
++.+-||.+.-.+|...+.... +...-.+..+|..++...+|+|+..+|+......
T Consensus 305 f~v~eDg~~ge~~ls~ilq~~l---------------gv~~l~v~~lf~~i~q~d~~ki~~~~f~~fa~~~ 360 (412)
T KOG4666|consen 305 FSVAEDGISGEHILSLILQVVL---------------GVEVLRVPVLFPSIEQKDDPKIYASNFRKFAATE 360 (412)
T ss_pred cccccccccchHHHHHHHHHhc---------------CcceeeccccchhhhcccCcceeHHHHHHHHHhC
Confidence 9999999999988776544332 2222356788999999999999999999887543
No 97
>KOG0169 consensus Phosphoinositide-specific phospholipase C [Signal transduction mechanisms]
Probab=96.98 E-value=0.0028 Score=63.73 Aligned_cols=140 Identities=17% Similarity=0.149 Sum_probs=113.1
Q ss_pred hHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccccCCCCCCcccc
Q 017306 115 NVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYD 194 (374)
Q Consensus 115 ~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~ 194 (374)
+....+...|...|++ ++|.++..+...++..+...+....+..+|+..+..+++++.+.+|..+.... ...
T Consensus 133 ~~~~wi~~~~~~ad~~-~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~-------~~r 204 (746)
T KOG0169|consen 133 RREHWIHSIFQEADKN-KNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKEL-------TKR 204 (746)
T ss_pred hHHHHHHHHHHHHccc-cccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhh-------ccC
Confidence 4467888999999999 99999999999999999998888899999999999999999999999876532 222
Q ss_pred hhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCC----CCCcccHHHHHHHHHhhh
Q 017306 195 MGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSD----RDGKVNFKEFFHGLFDLV 266 (374)
Q Consensus 195 ~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d----~dG~Is~~EF~~~l~~~~ 266 (374)
. .+.. .|..+- .+.+.++.++|..+|....+ ....+...++++++.+-.. ..+.++++.|...|...-
T Consensus 205 p-ev~~-~f~~~s-~~~~~ls~~~L~~Fl~~~q~-e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~S~~ 276 (746)
T KOG0169|consen 205 P-EVYF-LFVQYS-HGKEYLSTDDLLRFLEEEQG-EDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLFSPD 276 (746)
T ss_pred c-hHHH-HHHHHh-CCCCccCHHHHHHHHHHhcc-cccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhcCcc
Confidence 3 5666 887774 44999999999999986642 3567777888888777543 446699999999887643
No 98
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.90 E-value=0.0017 Score=49.58 Aligned_cols=60 Identities=23% Similarity=0.411 Sum_probs=45.9
Q ss_pred HHhhhhccCCCCccCHHhHHHHHHhhCC-------CcccchHHH----HHHHHHHccCCCCCcccHHHHhc
Q 017306 290 QLFGQLDKDGDGYLSDVELLPIIGKLHP-------SERYYAKQQ----ADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 290 ~~F~~~D~d~dG~Is~~El~~~l~~l~~-------~~~~~~~~~----~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
--|+..|.|++|+|+.-|+...+...+. .....++.+ ++.+++.-|.|+||.|+|.||+.
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK 141 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLK 141 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHh
Confidence 4588999999999999999999875541 111223344 56666778999999999999987
No 99
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=96.80 E-value=0.0027 Score=61.07 Aligned_cols=63 Identities=25% Similarity=0.477 Sum_probs=56.4
Q ss_pred hHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 286 APARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 286 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
..++..|..+| |++|+++..|+..++.+.+........++++.++...+.|.+|+|+++||+.
T Consensus 19 ~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~ 81 (627)
T KOG0046|consen 19 RELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVG 81 (627)
T ss_pred HHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHH
Confidence 35788899999 9999999999999999876444556789999999999999999999999999
No 100
>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]
Probab=96.80 E-value=0.0023 Score=61.52 Aligned_cols=73 Identities=29% Similarity=0.347 Sum_probs=61.1
Q ss_pred cccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 191 FGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 191 ~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
...+...+++ .|...| |++|+|+..|+..++...+...-....++++.++...+.|.+|+|+|+||+..+...
T Consensus 14 tq~El~~l~~-kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 14 TQEELRELKE-KFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred cHHHHHHHHH-HHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 3455667888 999999 999999999999999877643345568899999999999999999999999955443
No 101
>KOG4065 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.66 E-value=0.0062 Score=46.64 Aligned_cols=66 Identities=17% Similarity=0.197 Sum_probs=47.6
Q ss_pred hHHHHHhhhhcCCCCCCCccHHHHHHhhccC------CC-CChhhhHHH----HHHHHHHhcCCCCCcccHHHHHHH
Q 017306 196 GWWKEEHFNASDADGDGLLNLTEFNDFLHPA------DT-KNPKLILWL----SKEEVRERDSDRDGKVNFKEFFHG 261 (374)
Q Consensus 196 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~------~~-~~~~~~~~~----~~~l~~~~D~d~dG~Is~~EF~~~ 261 (374)
+.++-..|++.|.|++|+|+.-|+..++.-. +. ..|-.++.+ ++.+++.-|.|+||.|+|.||+..
T Consensus 66 eqlqfHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 66 EQLQFHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred HHHhhhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 3344348999999999999999999887422 22 123334444 455566779999999999999874
No 102
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=96.18 E-value=0.017 Score=52.05 Aligned_cols=117 Identities=22% Similarity=0.403 Sum_probs=74.2
Q ss_pred CCCCCCCCC--CcchhhhhhhhccCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhch-----h-------
Q 017306 86 HDAAPGEEA--QPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAE-----R------- 151 (374)
Q Consensus 86 ~~~~~~~~~--~~~~~~~~~~~~~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~-----~------- 151 (374)
+-..||+.. ..+|++. +-|.+.. ++-+ ..|...|.| +||+++..||..++..--. .
T Consensus 219 KvnhPGSkdQLkEVWEE~----DgLdpn~-fdPK----TFF~LHD~N-sDGfldeqELEaLFtkELEKvYdpkNeeDDM~ 288 (442)
T KOG3866|consen 219 KVNHPGSKDQLKEVWEES----DGLDPNQ-FDPK----TFFALHDLN-SDGFLDEQELEALFTKELEKVYDPKNEEDDMK 288 (442)
T ss_pred cCCCCCcHHHHHHHHHHh----cCCCccc-CCcc----hheeeeccC-CcccccHHHHHHHHHHHHHHhcCCCCcchHHH
Confidence 345677664 3566666 6666654 3334 789999999 9999999999887665210 0
Q ss_pred hhHHH----HHHHHHhhcCCCCcceecccccccccccCCCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhc
Q 017306 152 DVMHR----TQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLH 224 (374)
Q Consensus 152 ~~~~~----~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~ 224 (374)
...++ -+-+|+.+|+|.|..||.+||+...-.... ....+.|.. .+.....|-+|++++=+
T Consensus 289 EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~kef-----~~p~e~WEt-------l~q~~~yTeEEL~~fE~ 353 (442)
T KOG3866|consen 289 EMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDNKEF-----NPPKEEWET-------LGQKKVYTEEELQQFER 353 (442)
T ss_pred HHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhhccc-----CCcchhhhh-------hcccccccHHHHHHHHH
Confidence 01111 134489999999999999999987653322 111133332 23445667777777644
No 103
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.88 E-value=0.0097 Score=33.09 Aligned_cols=27 Identities=30% Similarity=0.502 Sum_probs=21.3
Q ss_pred HHHHhhhhccCCCCccCHHhHHHHHHh
Q 017306 288 ARQLFGQLDKDGDGYLSDVELLPIIGK 314 (374)
Q Consensus 288 ~~~~F~~~D~d~dG~Is~~El~~~l~~ 314 (374)
++.+|+.+|.+++|.|+..||..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 456788888888888888888887754
No 104
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=95.57 E-value=0.01 Score=32.94 Aligned_cols=27 Identities=30% Similarity=0.351 Sum_probs=21.5
Q ss_pred HHhhhcccCCCCCCCcccHHHHHHHHHH
Q 017306 120 LVLLFPKIDVNPADGYINEDELTDWNMQ 147 (374)
Q Consensus 120 l~~~F~~~D~d~~dG~Is~~El~~~l~~ 147 (374)
++.+|..+|.+ ++|.|+..||..++..
T Consensus 2 ~~~~f~~~d~~-~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKD-GDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCC-CCCcEeHHHHHHHHHh
Confidence 45778888888 8888888888887764
No 105
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=95.52 E-value=0.039 Score=54.32 Aligned_cols=155 Identities=21% Similarity=0.177 Sum_probs=86.5
Q ss_pred cccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHH---HHHHHHHhcCCC--CCcccHHHHHHHHHhh
Q 017306 191 FGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWL---SKEEVRERDSDR--DGKVNFKEFFHGLFDL 265 (374)
Q Consensus 191 ~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~---~~~l~~~~D~d~--dG~Is~~EF~~~l~~~ 265 (374)
.......|.. +|+..|.|.||.+|-.|+..+-...-. ..+...+ +...+...-.+| ++.++..-|+......
T Consensus 190 kp~~v~al~R-IFki~D~d~D~~Lsd~Eln~fQ~~CF~--~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lf 266 (625)
T KOG1707|consen 190 KPRCVKALKR-IFKISDSDNDGALSDAELNDFQKKCFN--TPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLF 266 (625)
T ss_pred cHHHHHHHHH-HHhhhccccccccchhhhhHHHHHhcC--CCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHH
Confidence 3444556776 999999999999999999876543211 2333333 344444433332 3446666677543333
Q ss_pred hhccCcCC-------------CCCC---------------CCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCC
Q 017306 266 VRNYDDEG-------------HNSS---------------HPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHP 317 (374)
Q Consensus 266 ~~~~~~~~-------------~~~~---------------~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~ 317 (374)
+.....+. .... .+-......-+...|..+|.|+||-++..|+..++....
T Consensus 267 iergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P- 345 (625)
T KOG1707|consen 267 IERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAP- 345 (625)
T ss_pred HHhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCC-
Confidence 32211100 0000 000011123567889999999999999999999997653
Q ss_pred CcccchHHHHHHHHHHccCCCCCcccHHHHhcCccc
Q 017306 318 SERYYAKQQADYIISQADTDKDGRLTLLEMIENPYV 353 (374)
Q Consensus 318 ~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~ 353 (374)
+......-..+ ..-.+..|-++|+-|+..|.+
T Consensus 346 ~~pW~~~~~~~----~t~~~~~G~ltl~g~l~~WsL 377 (625)
T KOG1707|consen 346 GSPWTSSPYKD----STVKNERGWLTLNGFLSQWSL 377 (625)
T ss_pred CCCCCCCcccc----cceecccceeehhhHHHHHHH
Confidence 21100000000 001236788999988886653
No 106
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=95.33 E-value=0.013 Score=53.28 Aligned_cols=64 Identities=20% Similarity=0.212 Sum_probs=51.5
Q ss_pred HHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCcc
Q 017306 287 PARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPY 352 (374)
Q Consensus 287 ~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~ 352 (374)
.+..-|..+|+|.++.|.+.|++.+=+-+. .......-...+++..|.|+|.+||+.|++....
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~--k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~ 397 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLL--KKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLG 397 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHH--hhccHHHHhhhcchhcccCCCceecHHHHhhhhc
Confidence 456779999999999999999987654442 2224567789999999999999999999998433
No 107
>KOG1707 consensus Predicted Ras related/Rac-GTP binding protein [Defense mechanisms]
Probab=95.07 E-value=0.046 Score=53.85 Aligned_cols=142 Identities=13% Similarity=0.100 Sum_probs=83.4
Q ss_pred hhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHh-chhhhHHHHHHHH---HhhcCC--CCcceecccccccccccCCC
Q 017306 114 FNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQ-AERDVMHRTQREM---ETHDKN--KDGFVSFAEYEPPTWVRNSD 187 (374)
Q Consensus 114 ~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~-~~~~~~~~~~~~~---~~~D~d--~dG~Is~~EF~~~~~~~~~~ 187 (374)
......+.++|...|.| +||.+|-.|+..+-... +.+....++..+- ...-.+ .++.++..-|+.+.......
T Consensus 191 p~~v~al~RIFki~D~d-~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfier 269 (625)
T KOG1707|consen 191 PRCVKALKRIFKISDSD-NDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIER 269 (625)
T ss_pred HHHHHHHHHHHhhhccc-cccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHh
Confidence 34578899999999999 99999999998865543 4444444443332 222222 13345555554322100000
Q ss_pred -------------------------------------CCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCC
Q 017306 188 -------------------------------------NNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKN 230 (374)
Q Consensus 188 -------------------------------------~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~ 230 (374)
-+....-.+-+.. +|..||.|+||.++..||..++.......
T Consensus 270 gr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~-~f~~~D~d~Dg~L~p~El~~LF~~~P~~p 348 (625)
T KOG1707|consen 270 GRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVD-VFEKFDRDNDGALSPEELKDLFSTAPGSP 348 (625)
T ss_pred ccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHH-HHHhccCCCCCCcCHHHHHHHhhhCCCCC
Confidence 0112222345566 99999999999999999999987654211
Q ss_pred hhhhHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 017306 231 PKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262 (374)
Q Consensus 231 ~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l 262 (374)
-.-+. .-...-.+..|.+++.-|+...
T Consensus 349 W~~~~-----~~~~t~~~~~G~ltl~g~l~~W 375 (625)
T KOG1707|consen 349 WTSSP-----YKDSTVKNERGWLTLNGFLSQW 375 (625)
T ss_pred CCCCc-----ccccceecccceeehhhHHHHH
Confidence 00000 0001112367889999888743
No 108
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=94.90 E-value=0.038 Score=40.58 Aligned_cols=65 Identities=23% Similarity=0.374 Sum_probs=52.0
Q ss_pred HHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCC----CCCcccHHHHHHHHHhh
Q 017306 198 WKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSD----RDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 198 ~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d----~dG~Is~~EF~~~l~~~ 265 (374)
+.. +|..+-. +.+.||.++|..+|....+. +..+...+..++..+..+ ..+.++++.|...|...
T Consensus 2 i~~-if~~ys~-~~~~mt~~~f~~FL~~eQ~~-~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 2 IEE-IFRKYSS-DKEYMTAEEFRRFLREEQGE-PRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHH-HHHHHCT-TSSSEEHHHHHHHHHHTSS--TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred HHH-HHHHHhC-CCCcCCHHHHHHHHHHHhcc-ccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence 455 8999944 89999999999999765431 356788999999988655 47899999999988764
No 109
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=94.73 E-value=0.095 Score=43.69 Aligned_cols=103 Identities=15% Similarity=0.096 Sum_probs=72.3
Q ss_pred HHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhh---------------------------------------------
Q 017306 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAERD--------------------------------------------- 152 (374)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~--------------------------------------------- 152 (374)
..|++--.-+|+| +||.|.+-|--..++.+|.+.
T Consensus 7 T~LQqHvaFFDrd-~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg 85 (174)
T PF05042_consen 7 TVLQQHVAFFDRD-KDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSG 85 (174)
T ss_pred cHHhhhhceeCCC-CCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcc
Confidence 3566777889999 999999999877666643332
Q ss_pred --------hHHHHHHHHHhhcCCCCcceecccccccccccCCCCCC---cccchhHHHHHhhhhcCCCCCCCccHHHHHH
Q 017306 153 --------VMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNS---FGYDMGWWKEEHFNASDADGDGLLNLTEFND 221 (374)
Q Consensus 153 --------~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~---~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~ 221 (374)
.+...+++|..++..+.+.+|+.|...++......... .....+ |.. .+... .+.+|.++++.++.
T Consensus 86 ~YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~E-W~~-~y~L~-~d~dG~l~Ke~iR~ 162 (174)
T PF05042_consen 86 AYDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFE-WGA-LYILA-KDKDGFLSKEDIRG 162 (174)
T ss_pred ccccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhH-HHH-HHHHH-cCcCCcEeHHHHhh
Confidence 35677888999998888899999998888654332111 112223 333 55554 67899999999988
Q ss_pred hhc
Q 017306 222 FLH 224 (374)
Q Consensus 222 ~l~ 224 (374)
+..
T Consensus 163 vYD 165 (174)
T PF05042_consen 163 VYD 165 (174)
T ss_pred hcc
Confidence 764
No 110
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=94.70 E-value=0.053 Score=39.80 Aligned_cols=67 Identities=19% Similarity=0.320 Sum_probs=53.8
Q ss_pred HHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCC----CCCcccHHHHhcCccchhhcccc
Q 017306 288 ARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTD----KDGRLTLLEMIENPYVFYSAIFT 360 (374)
Q Consensus 288 ~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n----~dG~Is~~EFl~~~~~f~~~~~~ 360 (374)
+..+|..+-. +.+.||.++|...|..-- ++...+..++..+|..+..+ ..+.+|++.|.. |..+...
T Consensus 2 i~~if~~ys~-~~~~mt~~~f~~FL~~eQ-~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~----fL~S~~N 72 (83)
T PF09279_consen 2 IEEIFRKYSS-DKEYMTAEEFRRFLREEQ-GEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTR----FLFSDEN 72 (83)
T ss_dssp HHHHHHHHCT-TSSSEEHHHHHHHHHHTS-S-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHH----HHHSTTC
T ss_pred HHHHHHHHhC-CCCcCCHHHHHHHHHHHh-ccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHH----HHCCCcC
Confidence 5778998844 789999999999997643 34346899999999998765 479999999999 8877653
No 111
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=94.20 E-value=0.099 Score=47.99 Aligned_cols=100 Identities=17% Similarity=0.049 Sum_probs=69.3
Q ss_pred HHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCC
Q 017306 198 WKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSS 277 (374)
Q Consensus 198 ~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~ 277 (374)
++. -|+.+-.+.++......+...-..+...-+..-...+.-||..+|.|.||.++..|....-
T Consensus 213 L~d-WF~~lhe~s~~~~~~ss~~~~~~~~d~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~--------------- 276 (434)
T KOG3555|consen 213 LRD-WFKALHEDSSQNDKTSSLHSAASGFDTSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIE--------------- 276 (434)
T ss_pred HHH-HHHHHHhhhhccCcchhhcccccccccccCcchhhhhhhhhhccccccccccCHHHhhhhh---------------
Confidence 344 6666656666665555554443222211133456677889999999999999999977633
Q ss_pred CCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhC
Q 017306 278 HPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLH 316 (374)
Q Consensus 278 ~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~ 316 (374)
.+.++..++..|...|...||.||-+|.-..+.+..
T Consensus 277 ---ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 277 ---LDKNEACIKPFFNSCDTYKDGSISTNEWCYCFQKSD 312 (434)
T ss_pred ---ccCchhHHHHHHhhhcccccCccccchhhhhhccCC
Confidence 245557888999999999999999999888876654
No 112
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=93.83 E-value=0.088 Score=50.56 Aligned_cols=64 Identities=22% Similarity=0.274 Sum_probs=55.0
Q ss_pred HHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhh
Q 017306 288 ARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYS 356 (374)
Q Consensus 288 ~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~ 356 (374)
...-|+.+-.|-.|+|+..--+.++.+.. +.-.++.+||...|.+.||.|++.||+..|...|.
T Consensus 233 YvnQFrtvQpDp~gfisGsaAknFFtKSk-----lpi~ELshIWeLsD~d~DGALtL~EFcAAfHLVVa 296 (737)
T KOG1955|consen 233 YVNQFRTVQPDPHGFISGSAAKNFFTKSK-----LPIEELSHIWELSDVDRDGALTLSEFCAAFHLVVA 296 (737)
T ss_pred HHhhhhcccCCcccccccHHHHhhhhhcc-----CchHHHHHHHhhcccCccccccHHHHHhhHhheee
Confidence 44568999999999999999999987652 66889999999999999999999999997765543
No 113
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=92.77 E-value=0.79 Score=38.32 Aligned_cols=106 Identities=16% Similarity=0.136 Sum_probs=70.5
Q ss_pred hHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCC----------------------------------------------
Q 017306 196 GWWKEEHFNASDADGDGLLNLTEFNDFLHPADTK---------------------------------------------- 229 (374)
Q Consensus 196 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~---------------------------------------------- 229 (374)
..+++ ...-||.|+||.|.+-|--..++.+|..
T Consensus 7 T~LQq-HvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg 85 (174)
T PF05042_consen 7 TVLQQ-HVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSG 85 (174)
T ss_pred cHHhh-hhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCcc
Confidence 34565 7788999999999998865544433221
Q ss_pred ----ChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCch--HHHHHhhhhccCCCCcc
Q 017306 230 ----NPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDA--PARQLFGQLDKDGDGYL 303 (374)
Q Consensus 230 ----~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~F~~~D~d~dG~I 303 (374)
.-....+..+++|..++..+.+.+|+.|...++......++- .++... +...+|... .+.+|.+
T Consensus 86 ~YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~---------~GW~a~~~EW~~~y~L~-~d~dG~l 155 (174)
T PF05042_consen 86 AYDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDP---------FGWFAAFFEWGALYILA-KDKDGFL 155 (174)
T ss_pred ccccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCc---------chhhhhhhHHHHHHHHH-cCcCCcE
Confidence 012344568899999999888899999999977664432111 122222 223334443 6778999
Q ss_pred CHHhHHHHH
Q 017306 304 SDVELLPII 312 (374)
Q Consensus 304 s~~El~~~l 312 (374)
+++.++.+.
T Consensus 156 ~Ke~iR~vY 164 (174)
T PF05042_consen 156 SKEDIRGVY 164 (174)
T ss_pred eHHHHhhhc
Confidence 999999876
No 114
>KOG3555 consensus Ca2+-binding proteoglycan Testican [General function prediction only]
Probab=92.76 E-value=0.15 Score=46.93 Aligned_cols=54 Identities=22% Similarity=0.181 Sum_probs=29.1
Q ss_pred hhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 017306 202 HFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGL 262 (374)
Q Consensus 202 ~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l 262 (374)
+|..+|.|.||.|+..|++.+-.- -.+.-++.+|+..|...||.|+-.|+...+
T Consensus 255 MFnklD~N~Dl~Ld~sEl~~I~ld-------knE~CikpFfnsCD~~kDg~iS~~EWC~CF 308 (434)
T KOG3555|consen 255 MFNKLDTNYDLLLDQSELRAIELD-------KNEACIKPFFNSCDTYKDGSISTNEWCYCF 308 (434)
T ss_pred hhhccccccccccCHHHhhhhhcc-------CchhHHHHHHhhhcccccCccccchhhhhh
Confidence 556666666666666665554321 123345555666666666666666655433
No 115
>KOG1955 consensus Ral-GTPase effector RALBP1 [Intracellular trafficking, secretion, and vesicular transport]
Probab=92.61 E-value=0.19 Score=48.37 Aligned_cols=68 Identities=19% Similarity=0.305 Sum_probs=57.4
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
..+.+.+-. .|+.+-.|-+|+|+..--+.++... ++.-.++..|+...|.+.||.+++.||+..+.-.
T Consensus 227 ~EQReYYvn-QFrtvQpDp~gfisGsaAknFFtKS-----klpi~ELshIWeLsD~d~DGALtL~EFcAAfHLV 294 (737)
T KOG1955|consen 227 PEQREYYVN-QFRTVQPDPHGFISGSAAKNFFTKS-----KLPIEELSHIWELSDVDRDGALTLSEFCAAFHLV 294 (737)
T ss_pred HHHHHHHHh-hhhcccCCcccccccHHHHhhhhhc-----cCchHHHHHHHhhcccCccccccHHHHHhhHhhe
Confidence 444556666 9999999999999999998888763 5677789999999999999999999999876543
No 116
>KOG3866 consensus DNA-binding protein of the nucleobindin family [General function prediction only]
Probab=92.56 E-value=0.15 Score=46.10 Aligned_cols=61 Identities=26% Similarity=0.476 Sum_probs=42.2
Q ss_pred HHHhhhhccCCCCccCHHhHHHHHHh----hC-CCcccch----HH----HHHHHHHHccCCCCCcccHHHHhc
Q 017306 289 RQLFGQLDKDGDGYLSDVELLPIIGK----LH-PSERYYA----KQ----QADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 289 ~~~F~~~D~d~dG~Is~~El~~~l~~----l~-~~~~~~~----~~----~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
+-.|...|.|+||+++..||..++.. ++ |....-. .+ --+++|+.+|+|.|..||++||++
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~ 320 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLN 320 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHh
Confidence 45678888888888888888776642 22 1110000 00 136789999999999999999998
No 117
>KOG4578 consensus Uncharacterized conserved protein, contains KAZAL and TY domains [General function prediction only]
Probab=91.99 E-value=0.085 Score=48.08 Aligned_cols=63 Identities=19% Similarity=0.125 Sum_probs=49.6
Q ss_pred HHHHhhhhcCCCCCCCccHHHHHHh---hccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 017306 198 WKEEHFNASDADGDGLLNLTEFNDF---LHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLV 266 (374)
Q Consensus 198 ~~~~~F~~~D~d~dG~Is~~E~~~~---l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~ 266 (374)
+.- .|..+|+|.++.|.+.|++.+ +... .-...-...+++..|.|+|-+|++.|+...+....
T Consensus 335 v~w-~F~qLdkN~nn~i~rrEwKpFK~~l~k~-----s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~~ 400 (421)
T KOG4578|consen 335 VHW-YFNQLDKNSNNDIERREWKPFKRVLLKK-----SKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGVEK 400 (421)
T ss_pred eee-eeeeecccccCccchhhcchHHHHHHhh-----ccHHHHhhhcchhcccCCCceecHHHHhhhhcccc
Confidence 444 899999999999999996554 4432 23455678899999999999999999999776543
No 118
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=90.61 E-value=0.63 Score=48.63 Aligned_cols=105 Identities=18% Similarity=0.079 Sum_probs=79.6
Q ss_pred cccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCCh--hhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhc
Q 017306 191 FGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNP--KLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRN 268 (374)
Q Consensus 191 ~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~--~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~ 268 (374)
.......++. .|..+|+...|.++.+++..+|..+|.... .....++-.++...|.++-|.+++.+|...|......
T Consensus 742 sQ~v~~ElrA-le~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~ 820 (890)
T KOG0035|consen 742 SQYVLDELRA-LENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYED 820 (890)
T ss_pred hHHHHHHHHH-HHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhh
Confidence 3455567787 999999999999999999999998875322 2234455666777788888999999999988776552
Q ss_pred cCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHH
Q 017306 269 YDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLP 310 (374)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~ 310 (374)
......+..+|+.+-+++. +|..+||..
T Consensus 821 -------------l~~~~r~i~s~~d~~ktk~-~lL~eEL~~ 848 (890)
T KOG0035|consen 821 -------------LDTELRAILAFEDWAKTKA-YLLLEELVR 848 (890)
T ss_pred -------------hcHHHHHHHHHHHHHcchh-HHHHHHHHh
Confidence 3344567778888766665 788888876
No 119
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=88.98 E-value=0.73 Score=46.14 Aligned_cols=61 Identities=23% Similarity=0.247 Sum_probs=52.2
Q ss_pred hhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhH
Q 017306 233 LILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVEL 308 (374)
Q Consensus 233 ~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El 308 (374)
.+...+.++|+..|.+++|.|+|.+++.++...+. +...+.++-+|+.+|.+++ .+..+|.
T Consensus 552 ~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~--------------~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 552 VSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKA--------------GDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHh--------------hhHHHHHHHHHhhccCCcc-ccccccc
Confidence 45556788999999999999999999999887765 3455688899999999999 9999988
No 120
>KOG0035 consensus Ca2+-binding actin-bundling protein (actinin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]
Probab=88.96 E-value=1.3 Score=46.33 Aligned_cols=134 Identities=19% Similarity=0.056 Sum_probs=88.8
Q ss_pred hHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhH-----HHHHHHHHhhcCCCCcceecccccccccccCCCCC
Q 017306 115 NVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVM-----HRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNN 189 (374)
Q Consensus 115 ~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~-----~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~ 189 (374)
.+..+|+.+|..+|+. ..|.++.+++...|..+|.+.-. .+...++...|.++-|.++|.+|...+.....
T Consensus 744 ~v~~ElrAle~~~~~~-d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e--- 819 (890)
T KOG0035|consen 744 YVLDELRALENEQDKI-DGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYE--- 819 (890)
T ss_pred HHHHHHHHHHhHHHHh-hcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhh---
Confidence 4578899999999999 88999999999999999876553 23344556777888899999999998875432
Q ss_pred CcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCC--CCcccHHHHHHHH
Q 017306 190 SFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDR--DGKVNFKEFFHGL 262 (374)
Q Consensus 190 ~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~--dG~Is~~EF~~~l 262 (374)
.......+.. +|+.+-++.. +|..+||.. .. +.+..+.+..-+..++.++ -|.|++.-|...+
T Consensus 820 -~l~~~~r~i~-s~~d~~ktk~-~lL~eEL~~---~~----d~lv~d~~~~e~~~~~~~~~~~r~Ld~~~~s~~~ 884 (890)
T KOG0035|consen 820 -DLDTELRAIL-AFEDWAKTKA-YLLLEELVR---ER----DELVRDLDIQEMAAYDEDERLPRGLDQVKFSSSL 884 (890)
T ss_pred -hhcHHHHHHH-HHHHHHcchh-HHHHHHHHh---hc----cHhhHHHHHHhhcccccCCcccccchHHHHHHHh
Confidence 1223344555 7777655544 788999887 11 2333332322333333332 2447777666544
No 121
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=88.95 E-value=0.27 Score=48.40 Aligned_cols=72 Identities=19% Similarity=0.196 Sum_probs=64.9
Q ss_pred cCChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccccccc
Q 017306 107 YLNDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (374)
Q Consensus 107 ~l~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 183 (374)
.|++++ ..+.+..|..+|.| +.|+++.......|+..+.+.+.+.+.++.+..|.+-+|.++..||..++..
T Consensus 586 ~~~~~~----~~~~~~rf~~lD~~-k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~ 657 (680)
T KOG0042|consen 586 KLTPED----FLRRKTRFAFLDAD-KKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSA 657 (680)
T ss_pred ccCHHH----HHHHHHHHHhhcch-HHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHH
Confidence 678887 67788999999999 8999999999999999988888899999999999999999999999887764
No 122
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=88.66 E-value=0.26 Score=34.69 Aligned_cols=57 Identities=19% Similarity=0.317 Sum_probs=39.6
Q ss_pred CchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCC-------CCcccHHHHhcCc
Q 017306 284 MDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDK-------DGRLTLLEMIENP 351 (374)
Q Consensus 284 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~-------dG~Is~~EFl~~~ 351 (374)
..+.+..+|+.+ .++.++||..||++.| . +++++.+++.+..-. -|.++|..|++..
T Consensus 4 s~eqv~~aFr~l-A~~KpyVT~~dLr~~l---~-------pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l 67 (69)
T PF08726_consen 4 SAEQVEEAFRAL-AGGKPYVTEEDLRRSL---T-------PEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNSL 67 (69)
T ss_dssp TCHHHHHHHHHH-CTSSSCEEHHHHHHHS-----------CCCHHHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred CHHHHHHHHHHH-HcCCCcccHHHHHHHc---C-------cHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence 346889999999 7788999999999876 2 223355555544322 2678999888743
No 123
>KOG0998 consensus Synaptic vesicle protein EHS-1 and related EH domain proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=86.96 E-value=0.57 Score=49.69 Aligned_cols=142 Identities=17% Similarity=0.096 Sum_probs=93.8
Q ss_pred HHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhh-------------------------------------------H
Q 017306 118 DRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDV-------------------------------------------M 154 (374)
Q Consensus 118 ~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~-------------------------------------------~ 154 (374)
..+.+++...|.+ .+|.++..|+...+......+. .
T Consensus 162 ~~l~~iw~l~d~d-~~g~Ld~~ef~~am~l~~~~l~~~~~p~P~~~p~~lIpps~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (847)
T KOG0998|consen 162 DVLGRIWELSDID-KDGNLDRDEFAVAMHLINDLLNGNSEPVPSRLPPSLIPPSKSELSANSSSKAIPFSQPFLASMASP 240 (847)
T ss_pred hhhcccccccccc-ccCCCChhhhhhhhhHHHHHhhcccCCCCccCCcccCCcchhcccccCcccccccccccccccccc
Confidence 4566788888998 8999999998776654311100 0
Q ss_pred HHHHHHHHhhcCCCCcceecccccccccccCCC-CCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhh
Q 017306 155 HRTQREMETHDKNKDGFVSFAEYEPPTWVRNSD-NNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKL 233 (374)
Q Consensus 155 ~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~-~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~ 233 (374)
.....++..-+.+.++.++-.++...+...... ..+.......+.. +|...|.+.+|.|+..+....+.+. .+
T Consensus 241 ~~~~~l~~~s~~~~~~s~~~~~~~~~~q~~~s~~~~vsp~d~~~~~~-if~q~d~~~dG~I~s~~~~~~f~~~-----gl 314 (847)
T KOG0998|consen 241 TTLSSLVDLSALNSNPSLSSLSLASSMQLIVSWSPKVSPSDKQKYSK-IFSQVDKDNDGSISSNEARNIFLPF-----GL 314 (847)
T ss_pred cccccccchhcccCCccccccccccccccccccCcccChHHHHHHHH-HHHhccccCCCcccccccccccccC-----CC
Confidence 011122233344455555555555443321110 0122334455666 8999999999999999999988874 46
Q ss_pred hHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 017306 234 ILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLV 266 (374)
Q Consensus 234 ~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~ 266 (374)
....+..++...|..+.|.|++.+|+-.+....
T Consensus 315 ~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~~~ 347 (847)
T KOG0998|consen 315 SKPRLAHVWLLADTQNTGTLSKDEFALAMHLLE 347 (847)
T ss_pred ChhhhhhhhhhcchhccCcccccccchhhhhhh
Confidence 777889999999999999999999987655443
No 124
>PLN02952 phosphoinositide phospholipase C
Probab=86.89 E-value=5.5 Score=40.49 Aligned_cols=91 Identities=15% Similarity=0.165 Sum_probs=59.5
Q ss_pred CCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHH
Q 017306 249 RDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQAD 328 (374)
Q Consensus 249 ~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~ 328 (374)
+.|.++|++|..+... ++.. ......++..+|..+-. +.+.|+.++|...|.... ++...+.+.+.
T Consensus 13 ~~g~l~f~~f~~f~~~-~k~~-----------~~~~r~ei~~lf~~~~~-~~~~mt~~~l~~FL~~~Q-~e~~~~~~~~~ 78 (599)
T PLN02952 13 DSGSYNYKMFNLFNRK-FKIT-----------EAEPPDDVKDVFCKFSV-GGGHMGADQLRRFLVLHQ-DELDCTLAEAQ 78 (599)
T ss_pred cCCCcCHHHHHHHHHH-hccc-----------cCCChHHHHHHHHHHhC-CCCccCHHHHHHHHHHhC-CCcCCCHHHHH
Confidence 3589999999774433 3210 12234688999998854 447899999999998753 22334566666
Q ss_pred HHHHHc----c---CCCCCcccHHHHhcCccchhhc
Q 017306 329 YIISQA----D---TDKDGRLTLLEMIENPYVFYSA 357 (374)
Q Consensus 329 ~l~~~~----D---~n~dG~Is~~EFl~~~~~f~~~ 357 (374)
.|+..+ . ..+.+.++++.|.. |+.+
T Consensus 79 ~i~~~~~~~~~~~~~~~~~~l~~~~F~~----~l~s 110 (599)
T PLN02952 79 RIVEEVINRRHHVTRYTRHGLNLDDFFH----FLLY 110 (599)
T ss_pred HHHHHHHhhccccccccccCcCHHHHHH----HHcC
Confidence 665543 1 11234589999999 6654
No 125
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=85.95 E-value=1.3 Score=47.96 Aligned_cols=61 Identities=13% Similarity=0.309 Sum_probs=51.6
Q ss_pred hhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 017306 202 HFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLV 266 (374)
Q Consensus 202 ~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~ 266 (374)
.|+.+|+||.|.||..+|.+++.... .-+..+++-++.....|.+...+|++|+.-+....
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~k----~ytqse~dfllscae~dend~~~y~dfv~rfhepa 4122 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGHK----HYTQSEIDFLLSCAEADENDMFDYEDFVDRFHEPA 4122 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhccc----cchhHHHHHHHHhhccCccccccHHHHHHHhcCch
Confidence 78889999999999999999997653 56777888899988889899999999997665443
No 126
>KOG2243 consensus Ca2+ release channel (ryanodine receptor) [Signal transduction mechanisms]
Probab=84.60 E-value=1.4 Score=47.65 Aligned_cols=55 Identities=20% Similarity=0.487 Sum_probs=49.0
Q ss_pred HhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 291 LFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 291 ~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
.|+.+|.||.|.||..+|...+..- .-++..+++-+++-+..|.+..++|.+|+.
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~----k~ytqse~dfllscae~dend~~~y~dfv~ 4116 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGH----KHYTQSEIDFLLSCAEADENDMFDYEDFVD 4116 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhcc----ccchhHHHHHHHHhhccCccccccHHHHHH
Confidence 4788999999999999999988543 347899999999999999999999999998
No 127
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=84.42 E-value=0.54 Score=33.10 Aligned_cols=60 Identities=18% Similarity=0.242 Sum_probs=37.7
Q ss_pred hhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCC---CCCcccHHHHHHHH
Q 017306 195 MGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSD---RDGKVNFKEFFHGL 262 (374)
Q Consensus 195 ~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d---~dG~Is~~EF~~~l 262 (374)
.+.+.+ +|+.+ .++.++||.+||++.|.+.. .+-.+.+|-..-+.+ .-|.++|..|+..+
T Consensus 5 ~eqv~~-aFr~l-A~~KpyVT~~dLr~~l~pe~------aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l 67 (69)
T PF08726_consen 5 AEQVEE-AFRAL-AGGKPYVTEEDLRRSLTPEQ------AEYCISRMPPYEGPDGDAIPGAYDYESFTNSL 67 (69)
T ss_dssp CHHHHH-HHHHH-CTSSSCEEHHHHHHHS-CCC------HHHHHCCSEC--SSS----TTEEECHHHHCCC
T ss_pred HHHHHH-HHHHH-HcCCCcccHHHHHHHcCcHH------HHHHHHHCcccCCCCcCCCCCCcCHHHHHHHH
Confidence 466787 99999 88999999999999887532 222222222222222 23678998887643
No 128
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=84.32 E-value=0.38 Score=40.80 Aligned_cols=57 Identities=28% Similarity=0.444 Sum_probs=45.0
Q ss_pred hcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceeccccccccc
Q 017306 124 FPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEPPTW 182 (374)
Q Consensus 124 F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~ 182 (374)
|-.+|..|-||++|-.||.-+-..+ -++..-+..+|...|.|+||.|+.+|+-.-+.
T Consensus 193 f~qld~~p~d~~~sh~el~pl~ap~--ipme~c~~~f~e~cd~~nd~~ial~ew~~c~g 249 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPLRAPL--IPMEHCTTRFFETCDLDNDKYIALDEWAGCFG 249 (259)
T ss_pred eccccCCCccccccccccccccCCc--ccHHhhchhhhhcccCCCCCceeHHHhhcccC
Confidence 5678999899999999997643322 23445578889999999999999999987654
No 129
>PLN02952 phosphoinositide phospholipase C
Probab=83.99 E-value=2 Score=43.52 Aligned_cols=91 Identities=16% Similarity=0.145 Sum_probs=59.5
Q ss_pred CCcceecccccccccccCCCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHh--
Q 017306 168 KDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRER-- 245 (374)
Q Consensus 168 ~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~-- 245 (374)
+.|.++|+||..+...... ........+.. +|..+-. +.+.++.++|..+|....+. ...+...+..++..+
T Consensus 13 ~~g~l~f~~f~~f~~~~k~---~~~~~r~ei~~-lf~~~~~-~~~~mt~~~l~~FL~~~Q~e-~~~~~~~~~~i~~~~~~ 86 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKI---TEAEPPDDVKD-VFCKFSV-GGGHMGADQLRRFLVLHQDE-LDCTLAEAQRIVEEVIN 86 (599)
T ss_pred cCCCcCHHHHHHHHHHhcc---ccCCChHHHHH-HHHHHhC-CCCccCHHHHHHHHHHhCCC-cCCCHHHHHHHHHHHHh
Confidence 4689999999776553321 11224567888 9999854 44789999999999865432 124445555565433
Q ss_pred --c---CCCCCcccHHHHHHHHHh
Q 017306 246 --D---SDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 246 --D---~d~dG~Is~~EF~~~l~~ 264 (374)
. ..+.+.++++.|..+|..
T Consensus 87 ~~~~~~~~~~~~l~~~~F~~~l~s 110 (599)
T PLN02952 87 RRHHVTRYTRHGLNLDDFFHFLLY 110 (599)
T ss_pred hccccccccccCcCHHHHHHHHcC
Confidence 1 113345899999998874
No 130
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=82.97 E-value=0.76 Score=35.57 Aligned_cols=32 Identities=19% Similarity=0.283 Sum_probs=23.6
Q ss_pred cchHHHHHHHHHHccCCCCCcccHHHHhcCcc
Q 017306 321 YYAKQQADYIISQADTDKDGRLTLLEMIENPY 352 (374)
Q Consensus 321 ~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~ 352 (374)
.++++|++.++.++-.|..|+|.|.||+..|.
T Consensus 3 iLtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs 34 (118)
T PF08976_consen 3 ILTDEQFDRLWNEMPVNAKGRLKYQEFLSKFS 34 (118)
T ss_dssp ---HHHHHHHHTTS-B-TTS-EEHHHHHHHT-
T ss_pred cccHHHhhhhhhhCcCCccCCEeHHHHHHHcc
Confidence 37899999999999999999999999999443
No 131
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=80.10 E-value=3.3 Score=30.88 Aligned_cols=63 Identities=10% Similarity=0.064 Sum_probs=41.6
Q ss_pred HHHHHhhhcccCCCCCCCcccHHHHHHHHHHh-------c----hhhhHHHHHHHHHhhcCCCCcceecccccccccc
Q 017306 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQ-------A----ERDVMHRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (374)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~-------~----~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 183 (374)
.++++-+|..+ .| .+|.++...|..+|+.+ + .......++..|... ..+..|+.++|+..+..
T Consensus 2 ~dKyRylFsli-sd-~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 2 EDKYRYLFSLI-SD-SNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHHH-S--TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHHHHHT
T ss_pred hHHHHHHHHHH-cC-CCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHHHHHh
Confidence 46788999999 56 69999999999988874 1 122455667777765 35667999999988864
No 132
>KOG0042 consensus Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=79.45 E-value=1.9 Score=42.71 Aligned_cols=71 Identities=21% Similarity=0.214 Sum_probs=59.8
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhh
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLV 266 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~ 266 (374)
..+....+. .|..+|.|+.|+++.+...++|...+ .......+.+++++.|.+..|.+...||.+.+....
T Consensus 589 ~~~~~~~~~-rf~~lD~~k~~~~~i~~v~~vlk~~~---~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 589 PEDFLRRKT-RFAFLDADKKAYQAIADVLKVLKSEN---VGWDEDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred HHHHHHHHH-HHHhhcchHHHHHHHHHHHHHHHHhc---CCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 344455666 89999999999999999999998775 467888899999999999999999999999665543
No 133
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=79.36 E-value=6 Score=32.77 Aligned_cols=64 Identities=14% Similarity=0.195 Sum_probs=46.9
Q ss_pred hhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhh
Q 017306 202 HFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 202 ~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~ 265 (374)
.|-.|-..+...++...|..+++..+-....++...++-+|..+-..+..+|+|++|+.+|...
T Consensus 7 ~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 7 AFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAEL 70 (154)
T ss_dssp HHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHH
T ss_pred HHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 3333456667789999999999877655566888999999999877777789999999987543
No 134
>KOG4347 consensus GTPase-activating protein VRP [General function prediction only]
Probab=75.40 E-value=4.1 Score=41.04 Aligned_cols=58 Identities=22% Similarity=0.233 Sum_probs=46.8
Q ss_pred hHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHH
Q 017306 286 APARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEM 347 (374)
Q Consensus 286 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EF 347 (374)
.-+.++|..+|.+++|.|+..++...|..+..+ ..-+.+..+++.+|.+++ ..+.+|-
T Consensus 555 ~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~---~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 555 IFLERLFRLLDDSMTGLLTFKDLVSGLSILKAG---DALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHhcccCCcceeEHHHHHHHHHHHHhh---hHHHHHHHHHhhccCCcc-ccccccc
Confidence 346788999999999999999999999887433 345678889999999988 7776664
No 135
>KOG4004 consensus Matricellular protein Osteonectin/SPARC/BM-40 [Extracellular structures]
Probab=75.11 E-value=1.4 Score=37.44 Aligned_cols=66 Identities=32% Similarity=0.402 Sum_probs=48.2
Q ss_pred HHHhhhhccC-CCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhccccCCC
Q 017306 289 RQLFGQLDKD-GDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSAIFTDED 363 (374)
Q Consensus 289 ~~~F~~~D~d-~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~~~~~~~ 363 (374)
..-|-.+|.- -||++|-.||.++-..+- ..+.-+...|...|.|+||.|+++|+-. -++-.-.+++
T Consensus 190 ~wqf~qld~~p~d~~~sh~el~pl~ap~i-----pme~c~~~f~e~cd~~nd~~ial~ew~~----c~gikq~di~ 256 (259)
T KOG4004|consen 190 HWQFGQLDQHPIDGYLSHTELAPLRAPLI-----PMEHCTTRFFETCDLDNDKYIALDEWAG----CFGIKQKDID 256 (259)
T ss_pred eeeeccccCCCccccccccccccccCCcc-----cHHhhchhhhhcccCCCCCceeHHHhhc----ccCcchhccc
Confidence 3446677765 689999999988764442 2355678899999999999999999988 4444444443
No 136
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=69.65 E-value=13 Score=30.74 Aligned_cols=62 Identities=11% Similarity=0.210 Sum_probs=45.1
Q ss_pred HHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCc
Q 017306 290 QLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENP 351 (374)
Q Consensus 290 ~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~ 351 (374)
..|..|-..+...++..-|..+++..+.-...++...++.+|..+-..+..+|+|++|+...
T Consensus 6 ~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL 67 (154)
T PF05517_consen 6 KAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEAL 67 (154)
T ss_dssp HHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHH
T ss_pred HHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHH
Confidence 33444445666789999999999987655555889999999999877777789999999843
No 137
>PF02532 PsbI: Photosystem II reaction centre I protein (PSII 4.8 kDa protein); InterPro: IPR003686 Oxygenic photosynthesis uses two multi-subunit photosystems (I and II) located in the cell membranes of cyanobacteria and in the thylakoid membranes of chloroplasts in plants and algae. Photosystem II (PSII) has a P680 reaction centre containing chlorophyll 'a' that uses light energy to carry out the oxidation (splitting) of water molecules, and to produce ATP via a proton pump. Photosystem I (PSI) has a P700 reaction centre containing chlorophyll that takes the electron and associated hydrogen donated from PSII to reduce NADP+ to NADPH. Both ATP and NADPH are subsequently used in the light-independent reactions to convert carbon dioxide to glucose using the hydrogen atom extracted from water by PSII, releasing oxygen as a by-product. PSII is a multisubunit protein-pigment complex containing polypeptides both intrinsic and extrinsic to the photosynthetic membrane [, ]. Within the core of the complex, the chlorophyll and beta-carotene pigments are mainly bound to the antenna proteins CP43 (PsbC) and CP47 (PsbB), which pass the excitation energy on to the reaction centre proteins D1 (Qb, PsbA) and D2 (Qa, PsbD) that bind all the redox-active cofactors involved in the energy conversion process. The PSII oxygen-evolving complex (OEC) oxidises water to provide protons for use by PSI, and consists of OEE1 (PsbO), OEE2 (PsbP) and OEE3 (PsbQ). The remaining subunits in PSII are of low molecular weight (less than 10 kDa), and are involved in PSII assembly, stabilisation, dimerisation, and photo-protection []. This family represents the low molecular weight transmembrane protein PsbI, which is tightly associated with the D1/D2 heterodimer in PSII. The function of PsbI is unknown, but it may be involved in the assembly, dimerisation or stabilisation of PSII dimers [].; GO: 0015979 photosynthesis, 0009523 photosystem II, 0009539 photosystem II reaction center, 0016020 membrane; PDB: 3A0H_i 3ARC_I 3A0B_i 3BZ2_I 3PRQ_I 3KZI_I 3PRR_I 2AXT_i 4FBY_I 1S5L_i ....
Probab=66.76 E-value=14 Score=22.07 Aligned_cols=26 Identities=23% Similarity=0.308 Sum_probs=12.8
Q ss_pred chhHHHHHHHHHHHHHHHhcCCCCCCC
Q 017306 3 KVSLFIYVTIALLLLLLLSKSPNKPHS 29 (374)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (374)
|.++..+|++-.+|+++-+.| +.|.+
T Consensus 5 K~~Vy~vV~ffv~LFifGfls-nDp~R 30 (36)
T PF02532_consen 5 KIFVYTVVIFFVSLFIFGFLS-NDPGR 30 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCTTS
T ss_pred EEeehhhHHHHHHHHhccccC-CCCCC
Confidence 333444444444555555555 55654
No 138
>PF06692 MNSV_P7B: Melon necrotic spot virus P7B protein; InterPro: IPR009575 This family consists of several Melon necrotic spot virus (MNSV) P7B proteins. The function of this family is unknown.
Probab=66.48 E-value=8.7 Score=25.32 Aligned_cols=25 Identities=12% Similarity=0.250 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHHHHHhcCCCCCCC
Q 017306 5 SLFIYVTIALLLLLLLSKSPNKPHS 29 (374)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (374)
+.+++|++++++++..+.+|+.|.-
T Consensus 15 ~~lLiliis~~f~lI~~l~qq~~~y 39 (61)
T PF06692_consen 15 GPLLILIISFVFFLITSLGQQGNTY 39 (61)
T ss_pred hHHHHHHHHHHHHHHhhhccCCCee
Confidence 4567777888888877788666553
No 139
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=65.81 E-value=9.1 Score=20.10 Aligned_cols=17 Identities=29% Similarity=0.597 Sum_probs=11.4
Q ss_pred ccCCCCccCHHhHHHHH
Q 017306 296 DKDGDGYLSDVELLPII 312 (374)
Q Consensus 296 D~d~dG~Is~~El~~~l 312 (374)
|.|+||.|+.-++..+-
T Consensus 1 DvN~DG~vna~D~~~lk 17 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALLK 17 (21)
T ss_dssp -TTSSSSSSHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHH
Confidence 66788888877776443
No 140
>PF15144 DUF4576: Domain of unknown function (DUF4576)
Probab=63.54 E-value=10 Score=27.01 Aligned_cols=29 Identities=28% Similarity=0.510 Sum_probs=22.7
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 017306 1 MGKVSLFIYVTIALLLLLLLSKSPNKPHS 29 (374)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (374)
||-+++-+.|+++++++++.-+.-.+|..
T Consensus 1 MAvSvLrltivlGLlvLIltC~Ad~~p~~ 29 (88)
T PF15144_consen 1 MAVSVLRLTIVLGLLVLILTCHADDKPND 29 (88)
T ss_pred CchHHHHHHHHHHHHHHHhhhccCCCCCC
Confidence 78888889999999888887776555543
No 141
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=63.46 E-value=2.7 Score=33.72 Aligned_cols=13 Identities=38% Similarity=0.751 Sum_probs=5.2
Q ss_pred hHHHHHHHHHHHH
Q 017306 5 SLFIYVTIALLLL 17 (374)
Q Consensus 5 ~~~~~~~~~~~~~ 17 (374)
||+++|+++++|+
T Consensus 3 ~l~~iii~~i~l~ 15 (130)
T PF12273_consen 3 VLFAIIIVAILLF 15 (130)
T ss_pred eeHHHHHHHHHHH
Confidence 3444444443333
No 142
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=62.67 E-value=7.2 Score=29.39 Aligned_cols=18 Identities=33% Similarity=0.425 Sum_probs=9.0
Q ss_pred CchhHHHHHHHHHHHHHH
Q 017306 2 GKVSLFIYVTIALLLLLL 19 (374)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~ 19 (374)
+|+.|+|.|++|++|++.
T Consensus 3 SK~~llL~l~LA~lLlis 20 (95)
T PF07172_consen 3 SKAFLLLGLLLAALLLIS 20 (95)
T ss_pred hhHHHHHHHHHHHHHHHH
Confidence 355555555555544433
No 143
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=61.00 E-value=33 Score=25.57 Aligned_cols=65 Identities=14% Similarity=0.233 Sum_probs=41.3
Q ss_pred hHHHHHhhhhccCCCCccCHHhHHHHHHhh-------CCCc-ccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhc
Q 017306 286 APARQLFGQLDKDGDGYLSDVELLPIIGKL-------HPSE-RYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSA 357 (374)
Q Consensus 286 ~~~~~~F~~~D~d~dG~Is~~El~~~l~~l-------~~~~-~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~ 357 (374)
++.+.+|+.+ .|++|.++..-|...|..+ +.+. ....+..+...|... ...-.|+.++|++ |+.+
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~--~~~~~I~~~~Fl~----wl~~ 75 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV--QLSPKITENQFLD----WLMS 75 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT--TT-S-B-HHHHHH----HHHT
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc--CCCCccCHHHHHH----HHHh
Confidence 4788999999 7889999999998777632 2110 122566788888887 3566899999999 6644
No 144
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=60.83 E-value=12 Score=28.24 Aligned_cols=87 Identities=16% Similarity=0.031 Sum_probs=53.8
Q ss_pred CCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHH
Q 017306 210 GDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPAR 289 (374)
Q Consensus 210 ~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (374)
-||.++..|...+-.-+.. ...++......++..+........++.+|...+...+. +.....-+.
T Consensus 12 aDG~v~~~E~~~i~~~l~~-~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~r~~~l~ 77 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAE-RFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHFD-------------YEERLELVE 77 (104)
T ss_pred HcCCCCHHHHHHHHHHHHH-HhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCC-------------HHHHHHHHH
Confidence 4789999997765432211 01345666777777777666667889999987765432 122223445
Q ss_pred HHhhhhccCCCCccCHHhHHHHH
Q 017306 290 QLFGQLDKDGDGYLSDVELLPII 312 (374)
Q Consensus 290 ~~F~~~D~d~dG~Is~~El~~~l 312 (374)
.+|... --||.++..|-.-+-
T Consensus 78 ~L~~vA--~ADG~~~~~E~~~l~ 98 (104)
T cd07313 78 ALWEVA--YADGELDEYEEHLIR 98 (104)
T ss_pred HHHHHH--HhcCCCCHHHHHHHH
Confidence 555554 345889888876443
No 145
>PHA00003 B internal scaffolding protein
Probab=54.90 E-value=30 Score=26.34 Aligned_cols=64 Identities=20% Similarity=0.297 Sum_probs=40.3
Q ss_pred CCCCCCCCCchhhHHHHhhHhHH---HHHHHHHHhhcccCCCCCCCCCCCCCcchhhhhhhhccCChhhhhhHHHHHHhh
Q 017306 47 THHEPVPFDPLVADIERRREDRQ---WEKQYIEHAHHELSHNHDAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLL 123 (374)
Q Consensus 47 ~~~~~~~~d~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~l~~~ 123 (374)
+......|||++.++|+.|+++. ..|.++...++-+ ++ .++-.++
T Consensus 43 t~p~gLRrdpvq~d~EaERqkr~~iEagk~~c~RrFGgA-------tc-------------------------ddksa~i 90 (120)
T PHA00003 43 TDPSGLRRDPVQQDLEAERQKRADIEAGKAICARRFGGA-------TC-------------------------DDKSAKI 90 (120)
T ss_pred CCccccccCcccchHHHHHHHHHHHHHHHHHHHHHcCCC-------Cc-------------------------chHHHHH
Confidence 34556789999999999986654 2233333222111 11 2233477
Q ss_pred hcccCCCCCCCcccHHHHHHH
Q 017306 124 FPKIDVNPADGYINEDELTDW 144 (374)
Q Consensus 124 F~~~D~d~~dG~Is~~El~~~ 144 (374)
+..||.+ |-.|.+.||-.+
T Consensus 91 ya~FD~~--d~rVQpaEFYRF 109 (120)
T PHA00003 91 YAQFDPN--DRRVQPAEFYRF 109 (120)
T ss_pred hcccCcc--cceechhHheec
Confidence 8889976 888999888764
No 146
>KOG1264 consensus Phospholipase C [Lipid transport and metabolism]
Probab=53.51 E-value=19 Score=37.63 Aligned_cols=147 Identities=16% Similarity=0.099 Sum_probs=86.3
Q ss_pred hHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHH-HHHHhhcCCCCcceecccccccccccCCCCCCccc
Q 017306 115 NVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQ-REMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGY 193 (374)
Q Consensus 115 ~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~-~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~ 193 (374)
.+..-++..+-.+|.. .-..|+..+++..|.......+..... +-|.. |.-+.+.++|+.|..+....... .
T Consensus 141 qI~~wlrk~~ysvd~~-~~~~isard~k~~l~qvn~k~~~~kfl~e~~te-d~~~k~dlsf~~f~~ly~~lmfs-----~ 213 (1267)
T KOG1264|consen 141 QIERWLRKQIYSVDQT-RENSISARDLKTILPQVNFKVSSAKFLKEKFTE-DGARKDDLSFEQFHLLYKKLMFS-----Q 213 (1267)
T ss_pred HHHHHHHhhheeccch-hhhheeHHhhhcccccceEEechHHHHHHHHhH-hhhccccccHHHHHHHHHHHhhc-----c
Confidence 4566778888889987 777899999999998887665533322 22322 33456779999998776543321 1
Q ss_pred chhHHHH--Hhhhh--cCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCC-----CCCcccHHHHHHHHHh
Q 017306 194 DMGWWKE--EHFNA--SDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSD-----RDGKVNFKEFFHGLFD 264 (374)
Q Consensus 194 ~~~~~~~--~~F~~--~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d-----~dG~Is~~EF~~~l~~ 264 (374)
....+.+ ..|-. -+.-.--.++..||+++|..............+..+++.|-.| ..-.+++.||+..+..
T Consensus 214 ~~a~l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~~EPyl~v~EFv~fLFS 293 (1267)
T KOG1264|consen 214 QKAILLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRETAEPYLFVDEFVTFLFS 293 (1267)
T ss_pred chhhhhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhccCcceeHHHHHHHHhh
Confidence 1111111 01111 1222225789999999986432110111122345555554333 3456999999999987
Q ss_pred hhhc
Q 017306 265 LVRN 268 (374)
Q Consensus 265 ~~~~ 268 (374)
.-..
T Consensus 294 reNs 297 (1267)
T KOG1264|consen 294 RENS 297 (1267)
T ss_pred cccc
Confidence 7654
No 147
>PF10717 ODV-E18: Occlusion-derived virus envelope protein ODV-E18; InterPro: IPR019655 Baculovirus occlusion-derived virus (ODV) derives its envelope from an intranuclear membrane source. Occlusion-derived viral envelope proteins that are detected in viral-induced intranuclear microvesicles, but not detected in the plasma membrane, cytoplasmic membranes, or the nuclear envelope. This entry represents ODV-E18 protein which is encoded by baculovirus late genes with transcription initiating from a TAAG motif. ODV-E18 exists as a dimer in the ODV envelope, which contains a hydrophobic domain that putatively acts as a target or retention signal for intranuclear microvesicles []. ; GO: 0019031 viral envelope
Probab=51.79 E-value=23 Score=25.68 Aligned_cols=20 Identities=40% Similarity=0.565 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHHHHHhcCC
Q 017306 5 SLFIYVTIALLLLLLLSKSP 24 (374)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~ 24 (374)
+++.+|+|+++++++=+.|+
T Consensus 30 ILivLVIIiLlImlfqsSS~ 49 (85)
T PF10717_consen 30 ILIVLVIIILLIMLFQSSSN 49 (85)
T ss_pred HHHHHHHHHHHHHHHhccCC
Confidence 34444555555555555443
No 148
>CHL00024 psbI photosystem II protein I
Probab=51.75 E-value=16 Score=21.77 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=13.0
Q ss_pred chhHHHHHHHHHHHHHHHhcCCCCCCC
Q 017306 3 KVSLFIYVTIALLLLLLLSKSPNKPHS 29 (374)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (374)
|.++..+|+.-.+|+++-+.| +.|.+
T Consensus 5 Ki~Vy~vV~ffvsLFifGFls-nDp~R 30 (36)
T CHL00024 5 KLFVYTVVIFFVSLFIFGFLS-NDPGR 30 (36)
T ss_pred EeeehhHHHHHHHHHHccccC-CCCCC
Confidence 444444444444555555555 55654
No 149
>PRK02655 psbI photosystem II reaction center I protein I; Provisional
Probab=50.62 E-value=17 Score=21.91 Aligned_cols=26 Identities=27% Similarity=0.345 Sum_probs=13.2
Q ss_pred chhHHHHHHHHHHHHHHHhcCCCCCCC
Q 017306 3 KVSLFIYVTIALLLLLLLSKSPNKPHS 29 (374)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (374)
|.++..+|+.-..|+++-++| +.|.+
T Consensus 5 Ki~Vy~vV~ffvsLFiFGfls-nDP~R 30 (38)
T PRK02655 5 KISVYIVVFFFVGLFVFGFLS-SDPTR 30 (38)
T ss_pred EeeehhhHHHHHHHHHcccCC-CCCCC
Confidence 344444444444555555555 56654
No 150
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=50.15 E-value=12 Score=29.09 Aligned_cols=32 Identities=16% Similarity=0.166 Sum_probs=23.2
Q ss_pred hhhHHHHHHHHHHhcCCCCCcccHHHHHHHHH
Q 017306 232 KLILWLSKEEVRERDSDRDGKVNFKEFFHGLF 263 (374)
Q Consensus 232 ~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~ 263 (374)
.+++++.+.+..++-.|..|.|.|.||+.-+.
T Consensus 3 iLtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs 34 (118)
T PF08976_consen 3 ILTDEQFDRLWNEMPVNAKGRLKYQEFLSKFS 34 (118)
T ss_dssp ---HHHHHHHHTTS-B-TTS-EEHHHHHHHT-
T ss_pred cccHHHhhhhhhhCcCCccCCEeHHHHHHHcc
Confidence 46788999999999999999999999998654
No 151
>PF13956 Ibs_toxin: Toxin Ibs, type I toxin-antitoxin system
Probab=48.70 E-value=10 Score=18.90 Aligned_cols=8 Identities=25% Similarity=0.476 Sum_probs=4.3
Q ss_pred CCchhHHH
Q 017306 1 MGKVSLFI 8 (374)
Q Consensus 1 ~~~~~~~~ 8 (374)
|.|.++++
T Consensus 1 MMk~vIIl 8 (19)
T PF13956_consen 1 MMKLVIIL 8 (19)
T ss_pred CceehHHH
Confidence 66754443
No 152
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=48.10 E-value=2.5e+02 Score=30.16 Aligned_cols=124 Identities=10% Similarity=0.251 Sum_probs=80.8
Q ss_pred CCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhc--CCCCCcc-----cHHHHHHHHHhhhhccCcCCCCCCCC
Q 017306 207 DADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERD--SDRDGKV-----NFKEFFHGLFDLVRNYDDEGHNSSHP 279 (374)
Q Consensus 207 D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D--~d~dG~I-----s~~EF~~~l~~~~~~~~~~~~~~~~~ 279 (374)
-.|..|.|-...+.+++..-.. +..++..+.... .++...| +++.|...+...+.
T Consensus 158 qvn~~grip~knI~k~F~~~k~------~KrVe~al~~~gLp~~k~dsI~~d~f~~e~f~~~l~klcp------------ 219 (1189)
T KOG1265|consen 158 QVNFEGRIPVKNIIKTFSADKK------EKRVEKALEACGLPSGKNDSIEPDDFTLEKFYRLLNKLCP------------ 219 (1189)
T ss_pred cccccccccHHHHHHHhhcCCc------hhHHHHHHHhcCCCCCCcCccChhhccHHHHHHHHHhcCC------------
Confidence 4567777777777777654321 122333333332 2232334 44455554444332
Q ss_pred CCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhC--C--C---cccchHHHHHHHHHHccCCC----CCcccHHHHh
Q 017306 280 SDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLH--P--S---ERYYAKQQADYIISQADTDK----DGRLTLLEMI 348 (374)
Q Consensus 280 ~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~--~--~---~~~~~~~~~~~l~~~~D~n~----dG~Is~~EFl 348 (374)
...+.++|..+-.++.-++|.++|..+|+.-- | . -..+.+.++..|+..+..|. .|.++.+=|+
T Consensus 220 -----R~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ 294 (1189)
T KOG1265|consen 220 -----RPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFV 294 (1189)
T ss_pred -----chhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhH
Confidence 24788999999888889999999999997421 0 0 12356889999999998875 4899999999
Q ss_pred cCccchhhc
Q 017306 349 ENPYVFYSA 357 (374)
Q Consensus 349 ~~~~~f~~~ 357 (374)
. |.++
T Consensus 295 r----yl~g 299 (1189)
T KOG1265|consen 295 R----YLMG 299 (1189)
T ss_pred H----HhhC
Confidence 8 7665
No 153
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=47.97 E-value=38 Score=27.49 Aligned_cols=71 Identities=15% Similarity=0.144 Sum_probs=38.6
Q ss_pred CCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCC-------CCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCC
Q 017306 211 DGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSD-------RDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDT 283 (374)
Q Consensus 211 dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d-------~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~ 283 (374)
=+.||..||.++-.-. .-+...++.++.+|..+ ..+.|+|+-|...|...+.. ..
T Consensus 5 ~~~lsp~eF~qLq~y~-----eys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~-------------d~ 66 (138)
T PF14513_consen 5 WVSLSPEEFAQLQKYS-----EYSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEV-------------DL 66 (138)
T ss_dssp -S-S-HHHHHHHHHHH-----HH----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT--------------S-
T ss_pred eeccCHHHHHHHHHHH-----HHHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcC-------------CC
Confidence 3678999998865432 22333456667766433 34579999999988887662 34
Q ss_pred CchHHHHHhhhhccCC
Q 017306 284 MDAPARQLFGQLDKDG 299 (374)
Q Consensus 284 ~~~~~~~~F~~~D~d~ 299 (374)
..+-.+.+|..|-...
T Consensus 67 P~~lc~hLF~sF~~~~ 82 (138)
T PF14513_consen 67 PEDLCQHLFLSFQKKP 82 (138)
T ss_dssp -HHHHHHHHHHS----
T ss_pred CHHHHHHHHHHHhCcc
Confidence 5566778887774443
No 154
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=46.02 E-value=14 Score=27.93 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=46.8
Q ss_pred CCCcccHHHHHHHHHHhch--hhhHHHHHHHHHhhcCCCCcceecccccccccccCCCCCCcccchhHHHHHhhhhcCCC
Q 017306 132 ADGYINEDELTDWNMQQAE--RDVMHRTQREMETHDKNKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDAD 209 (374)
Q Consensus 132 ~dG~Is~~El~~~l~~~~~--~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d 209 (374)
-||.++..|...+-..+.. ..+..+...++..+........++.+|...+..... .......+.. +|... .
T Consensus 12 aDG~v~~~E~~~i~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~r~~~l~~-L~~vA--~ 84 (104)
T cd07313 12 ADGEYDEEERAAIDRLLAERFGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHFD----YEERLELVEA-LWEVA--Y 84 (104)
T ss_pred HcCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCC----HHHHHHHHHH-HHHHH--H
Confidence 4799999998776554322 345566666666665555555677777776543211 1112222333 55554 3
Q ss_pred CCCCccHHHHH
Q 017306 210 GDGLLNLTEFN 220 (374)
Q Consensus 210 ~dG~Is~~E~~ 220 (374)
-||.++..|-.
T Consensus 85 ADG~~~~~E~~ 95 (104)
T cd07313 85 ADGELDEYEEH 95 (104)
T ss_pred hcCCCCHHHHH
Confidence 45777777754
No 155
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=45.37 E-value=75 Score=30.70 Aligned_cols=90 Identities=18% Similarity=0.156 Sum_probs=60.1
Q ss_pred CCCCCccHHHHHHhhccCCCCC-hhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchH
Q 017306 209 DGDGLLNLTEFNDFLHPADTKN-PKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAP 287 (374)
Q Consensus 209 d~dG~Is~~E~~~~l~~~~~~~-~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (374)
.|+...+..||..+..+..... ..+.-+.+..+-+.+|.|.+|.|+.+|=-.++..-++. ......
T Consensus 40 agds~at~nefc~~~~~~c~s~~dklg~EAir~iHrqmDDD~nG~Id~~ESdeFlrEdmky-------------~~~~~k 106 (575)
T KOG4403|consen 40 AGDSRATRNEFCEVDAPECKSEQDKLGYEAIRDIHRQMDDDHNGSIDVEESDEFLREDMKY-------------RDSTRK 106 (575)
T ss_pred cCCchhhhccchhcCCchhhcccchhhHHHHHHHHHhcccccCCCcccccchHHHHHHhhc-------------ccchhh
Confidence 5677778888877766554322 56667778899999999999999999866666555542 122223
Q ss_pred HHHHhhhhccCCCCccCHHhHHHHHHhh
Q 017306 288 ARQLFGQLDKDGDGYLSDVELLPIIGKL 315 (374)
Q Consensus 288 ~~~~F~~~D~d~dG~Is~~El~~~l~~l 315 (374)
-.+.|.. .|-.||.++|-......
T Consensus 107 r~~~fH~----dD~~ItVedLWeaW~~S 130 (575)
T KOG4403|consen 107 RSEKFHG----DDKHITVEDLWEAWKES 130 (575)
T ss_pred hhhhccC----CccceeHHHHHHHHHhh
Confidence 3334543 34578888887666543
No 156
>PF08044 DUF1707: Domain of unknown function (DUF1707); InterPro: IPR012551 This domain is found in a variety of actinomycetales proteins. All of the proteins containing this domain are hypothetical and probably membrane bound or associated. Currently, it is unclear to the function of this domain.
Probab=44.76 E-value=68 Score=21.22 Aligned_cols=46 Identities=17% Similarity=0.179 Sum_probs=32.4
Q ss_pred ChhhhhhHHHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHH
Q 017306 109 NDEEKFNVTDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREM 161 (374)
Q Consensus 109 ~~e~~~~~~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~ 161 (374)
++.+|-...+.|...| .+|.|+.+||..-+.......+..++..++
T Consensus 4 sd~dR~~~~~~L~~a~-------a~GrL~~~Ef~~R~~~a~~A~t~~eL~~l~ 49 (53)
T PF08044_consen 4 SDADRERAVDLLRAAF-------AEGRLSLDEFDERLDAAYAARTRGELDALF 49 (53)
T ss_pred cHHHHHHHHHHHHHHH-------HCCCCCHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 5566666777787777 589999999998777665545555555544
No 157
>COG1314 SecG Preprotein translocase subunit SecG [Intracellular trafficking and secretion]
Probab=43.79 E-value=23 Score=26.15 Aligned_cols=29 Identities=28% Similarity=0.371 Sum_probs=21.5
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 017306 1 MGKVSLFIYVTIALLLLLLLSKSPNKPHS 29 (374)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (374)
|....++++++++++++.++..+|.++..
T Consensus 1 m~~~ll~i~i~~a~~LI~~VLlQ~~kg~g 29 (86)
T COG1314 1 MMTLLLVILIVVALALIILVLLQRGKGAG 29 (86)
T ss_pred CHHHHHHHHHHHHHHHHHheeeecCCCCC
Confidence 44555666688888888888888777554
No 158
>PLN02230 phosphoinositide phospholipase C 4
Probab=43.43 E-value=73 Score=32.60 Aligned_cols=71 Identities=14% Similarity=0.124 Sum_probs=47.8
Q ss_pred cchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhc-------CCCCCcccHHHHHHHHHhh
Q 017306 193 YDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERD-------SDRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 193 ~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D-------~d~dG~Is~~EF~~~l~~~ 265 (374)
.....++. +|..+- .+.+.++.++|..+|..........+...+..++..+- .-+.+.++.+.|...|...
T Consensus 26 ~p~~ei~~-lf~~~s-~~~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s~ 103 (598)
T PLN02230 26 GPVADVRD-LFEKYA-DGDAHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFST 103 (598)
T ss_pred CCcHHHHH-HHHHHh-CCCCccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcCc
Confidence 35567888 999994 44489999999999986542212334455566665331 1234569999999988763
No 159
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=41.18 E-value=2.2e+02 Score=25.85 Aligned_cols=48 Identities=15% Similarity=0.039 Sum_probs=27.6
Q ss_pred CCCcccHHHHHHHHHHhc--hhhhHHH---HHHHHHhhcCCCCcceecccccccccc
Q 017306 132 ADGYINEDELTDWNMQQA--ERDVMHR---TQREMETHDKNKDGFVSFAEYEPPTWV 183 (374)
Q Consensus 132 ~dG~Is~~El~~~l~~~~--~~~~~~~---~~~~~~~~D~d~dG~Is~~EF~~~~~~ 183 (374)
-||.||..|.. ..+.+- ...+.+. +..+|+.- .....++.+|+..+..
T Consensus 68 ADG~Vse~Ei~-~~~~l~~~~~l~~~~r~~a~~lf~~~---k~~~~~l~~~~~~~~~ 120 (267)
T PRK09430 68 AKGRVTEADIR-IASQLMDRMNLHGEARRAAQQAFREG---KEPDFPLREKLRQFRS 120 (267)
T ss_pred cCCCcCHHHHH-HHHHHHHHcCCCHHHHHHHHHHHHHh---cccCCCHHHHHHHHHH
Confidence 48999999997 334331 2223333 44555443 3334677888876653
No 160
>PF15176 LRR19-TM: Leucine-rich repeat family 19 TM domain
Probab=41.12 E-value=11 Score=28.42 Aligned_cols=19 Identities=32% Similarity=0.251 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHHHHHHhcC
Q 017306 5 SLFIYVTIALLLLLLLSKS 23 (374)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~ 23 (374)
.++.+|+.|+++.+|+...
T Consensus 19 ~LVGVv~~al~~SlLIala 37 (102)
T PF15176_consen 19 FLVGVVVTALVTSLLIALA 37 (102)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4556666666666665554
No 161
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=39.13 E-value=35 Score=32.54 Aligned_cols=57 Identities=26% Similarity=0.173 Sum_probs=43.4
Q ss_pred HHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhc
Q 017306 287 PARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 287 ~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
....+|-.+-. -+|+||..--+..+-.. .+....+-.+++.+|.|+||.++-+||.=
T Consensus 445 ~yde~fy~l~p-~~gk~sg~~ak~~mv~s-----klpnsvlgkiwklad~d~dg~ld~eefal 501 (532)
T KOG1954|consen 445 TYDEIFYTLSP-VNGKLSGRNAKKEMVKS-----KLPNSVLGKIWKLADIDKDGMLDDEEFAL 501 (532)
T ss_pred chHhhhhcccc-cCceeccchhHHHHHhc-----cCchhHHHhhhhhhcCCcccCcCHHHHHH
Confidence 34556665543 35899988777766443 25678899999999999999999999964
No 162
>KOG4403 consensus Cell surface glycoprotein STIM, contains SAM domain [General function prediction only]
Probab=37.77 E-value=1e+02 Score=29.76 Aligned_cols=57 Identities=14% Similarity=0.149 Sum_probs=41.5
Q ss_pred CCCcceecccccccccccCCCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhcc
Q 017306 167 NKDGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHP 225 (374)
Q Consensus 167 d~dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~ 225 (374)
+||...+-.||+........ ........+.++. +-+.+|-|.+|.|+.+|--.+|+.
T Consensus 40 agds~at~nefc~~~~~~c~-s~~dklg~EAir~-iHrqmDDD~nG~Id~~ESdeFlrE 96 (575)
T KOG4403|consen 40 AGDSRATRNEFCEVDAPECK-SEQDKLGYEAIRD-IHRQMDDDHNGSIDVEESDEFLRE 96 (575)
T ss_pred cCCchhhhccchhcCCchhh-cccchhhHHHHHH-HHHhcccccCCCcccccchHHHHH
Confidence 56777888888776554333 1122334577887 889999999999999998888874
No 163
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=37.41 E-value=37 Score=27.05 Aligned_cols=81 Identities=15% Similarity=0.103 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHhcCCC--CCcccHHHHHHHHHhhhhccCcCCCCCCC-C---CCCCCchHHHHHhhhhccCCCCccCHHh
Q 017306 234 ILWLSKEEVRERDSDR--DGKVNFKEFFHGLFDLVRNYDDEGHNSSH-P---SDDTMDAPARQLFGQLDKDGDGYLSDVE 307 (374)
Q Consensus 234 ~~~~~~~l~~~~D~d~--dG~Is~~EF~~~l~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~F~~~D~d~dG~Is~~E 307 (374)
.-+.+.++|+....+. |..|+..+....+...........+.... + .+....-.+..+...||++++|.|+.-.
T Consensus 39 ~l~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I~vls 118 (127)
T PF09068_consen 39 DLSNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKIRVLS 118 (127)
T ss_dssp -HHHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEEEHHH
T ss_pred eHHHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCeeehhH
Confidence 3344455555554432 45688888877766655322111111000 0 0011112345678899999999999999
Q ss_pred HHHHHHh
Q 017306 308 LLPIIGK 314 (374)
Q Consensus 308 l~~~l~~ 314 (374)
++..+..
T Consensus 119 ~KvaL~~ 125 (127)
T PF09068_consen 119 FKVALIT 125 (127)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9887754
No 164
>PLN02230 phosphoinositide phospholipase C 4
Probab=36.07 E-value=1.5e+02 Score=30.38 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=48.4
Q ss_pred CchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHcc-------CCCCCcccHHHHhcCccchhh
Q 017306 284 MDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQAD-------TDKDGRLTLLEMIENPYVFYS 356 (374)
Q Consensus 284 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D-------~n~dG~Is~~EFl~~~~~f~~ 356 (374)
...+++.+|..+-.++ +.++.++|...|....-++...+.+.+..++..+- .-+.+.++++.|.. |+.
T Consensus 27 p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~----yL~ 101 (598)
T PLN02230 27 PVADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNY----YLF 101 (598)
T ss_pred CcHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHH----HHc
Confidence 3468999999995444 89999999999987532222345666777775442 11345699999999 776
Q ss_pred cc
Q 017306 357 AI 358 (374)
Q Consensus 357 ~~ 358 (374)
+.
T Consensus 102 s~ 103 (598)
T PLN02230 102 ST 103 (598)
T ss_pred Cc
Confidence 64
No 165
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=35.27 E-value=51 Score=29.18 Aligned_cols=93 Identities=24% Similarity=0.297 Sum_probs=48.0
Q ss_pred hhHHHHhhHhHHHHHHHHHHh---hcccCCCCCCCCCCCCCcchhhhhhhhccCChhhhhhHHHHHHhhhcccCCCCCCC
Q 017306 58 VADIERRREDRQWEKQYIEHA---HHELSHNHDAAPGEEAQPEWEDFMNAEDYLNDEEKFNVTDRLVLLFPKIDVNPADG 134 (374)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~e~~~~~~~~l~~~F~~~D~d~~dG 134 (374)
|.+++|...+++..+-|..+. ||+-.+ .--..++...|+.+..++..|+++++ +.+..-=-.+| | -+|
T Consensus 19 vLGVer~a~~~eIrkAY~klal~~HPDk~~---eed~~ea~~kFq~l~k~y~iLsDeek----R~~YDetG~id-d-~~~ 89 (264)
T KOG0719|consen 19 VLGVERDATDKEIRKAYHKLALRLHPDKNH---EEDKVEATEKFQQLQKAYQILSDEEK----RAVYDETGSID-D-ESG 89 (264)
T ss_pred HhhhcccCCHHHHHHHHHHHHHHhCCCcch---hhhHHHHHHHHHHHHHHHHHhhHHHH----HHHHhccCCCC-C-ccc
Confidence 566777777777655444333 322210 01112245667777778999999984 33332223344 3 345
Q ss_pred cccHHHHHHHHHHhchhhhHHHHHHH
Q 017306 135 YINEDELTDWNMQQAERDVMHRTQRE 160 (374)
Q Consensus 135 ~Is~~El~~~l~~~~~~~~~~~~~~~ 160 (374)
.|.. .+..|++.+-...+.+.+..+
T Consensus 90 d~~~-~~~e~~~~iyk~VteedIeef 114 (264)
T KOG0719|consen 90 DIDE-DWLEFWRAIYKKVTEEDIEEF 114 (264)
T ss_pred hhhh-HHHHHHHHHHhhcccccHHHH
Confidence 4443 455555555444444444333
No 166
>PLN02222 phosphoinositide phospholipase C 2
Probab=34.43 E-value=93 Score=31.75 Aligned_cols=68 Identities=16% Similarity=0.206 Sum_probs=49.5
Q ss_pred chhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcC-CCCCcccHHHHHHHHHhh
Q 017306 194 DMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDS-DRDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 194 ~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~-d~dG~Is~~EF~~~l~~~ 265 (374)
....+.. +|..+-. ++.++.++|..+|....+. ...+.+.+..++..+.. ...+.++++.|...|...
T Consensus 23 ~~~ei~~-if~~~~~--~~~mt~~~l~~FL~~~Q~~-~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s~ 91 (581)
T PLN02222 23 APREIKT-IFEKYSE--NGVMTVDHLHRFLIDVQKQ-DKATREDAQSIINSASSLLHRNGLHLDAFFKYLFGD 91 (581)
T ss_pred CcHHHHH-HHHHhcC--CCCcCHHHHHHHHHHhcCC-ccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcCC
Confidence 4457887 9998853 4799999999999865432 23456677788887532 245679999999988764
No 167
>PLN02228 Phosphoinositide phospholipase C
Probab=33.71 E-value=1.4e+02 Score=30.32 Aligned_cols=69 Identities=17% Similarity=0.244 Sum_probs=50.7
Q ss_pred CchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCC----CCCcccHHHHhcCccchhhccc
Q 017306 284 MDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTD----KDGRLTLLEMIENPYVFYSAIF 359 (374)
Q Consensus 284 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n----~dG~Is~~EFl~~~~~f~~~~~ 359 (374)
...++..+|..+-. ++.++.++|...|.... ++...+.+.+..++..+... ..|.++++.|.. |+.+..
T Consensus 22 ~~~ei~~if~~~s~--~~~~t~~~~~~FL~~~Q-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~----yl~s~~ 94 (567)
T PLN02228 22 PPVSIKRLFEAYSR--NGKMSFDELLRFVSEVQ-GERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYR----YLFSDT 94 (567)
T ss_pred CcHHHHHHHHHhcC--CCccCHHHHHHHHHHhc-CCccCCHHHHHHHHHHhccchhhcccCccCHHHHHH----HhcCcc
Confidence 45688899988743 36899999999998763 23334567788999887643 346799999999 776543
No 168
>COG4103 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=33.66 E-value=53 Score=26.65 Aligned_cols=94 Identities=14% Similarity=0.064 Sum_probs=60.7
Q ss_pred hhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCC
Q 017306 202 HFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSD 281 (374)
Q Consensus 202 ~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~ 281 (374)
+|.++. -||.++..|...+..-+. .+-.++...++.++.....-+...+++-.|...+...+. .
T Consensus 35 lf~Vm~--ADG~v~~~E~~a~r~il~-~~f~i~~~~l~ali~~~e~~~~Ea~d~y~fts~l~r~Ld-------------~ 98 (148)
T COG4103 35 LFHVME--ADGTVSESEREAFRAILK-ENFGIDGEELDALIEAGEEAGYEAIDLYSFTSVLKRHLD-------------E 98 (148)
T ss_pred HHHHHh--cccCcCHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-------------H
Confidence 888885 567888888655432211 113567777888888777667778999999988876544 1
Q ss_pred CCCchHHHHHhhhhccCCCCccCHHhHHHHHH
Q 017306 282 DTMDAPARQLFGQLDKDGDGYLSDVELLPIIG 313 (374)
Q Consensus 282 ~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~ 313 (374)
....+-+..+++.. ..||.++..|-.-+.+
T Consensus 99 e~R~eli~~mweIa--~ADg~l~e~Ed~vi~R 128 (148)
T COG4103 99 EQRLELIGLMWEIA--YADGELDESEDHVIWR 128 (148)
T ss_pred HHHHHHHHHHHHHH--HccccccHHHHHHHHH
Confidence 22333444555553 5678888888665544
No 169
>PLN02222 phosphoinositide phospholipase C 2
Probab=32.45 E-value=1.7e+02 Score=29.93 Aligned_cols=67 Identities=13% Similarity=0.216 Sum_probs=50.1
Q ss_pred chHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccC-CCCCcccHHHHhcCccchhhcc
Q 017306 285 DAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADT-DKDGRLTLLEMIENPYVFYSAI 358 (374)
Q Consensus 285 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~-n~dG~Is~~EFl~~~~~f~~~~ 358 (374)
...+..+|..+-. ++.++.++|...|.... ++...+.+.+..|+..+.. -..+.++++.|.. |+.+.
T Consensus 24 ~~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q-~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~----yL~s~ 91 (581)
T PLN02222 24 PREIKTIFEKYSE--NGVMTVDHLHRFLIDVQ-KQDKATREDAQSIINSASSLLHRNGLHLDAFFK----YLFGD 91 (581)
T ss_pred cHHHHHHHHHhcC--CCCcCHHHHHHHHHHhc-CCccCCHHHHHHHHHhhhhhhhccCcCHHHHHH----HhcCC
Confidence 3588899988853 47999999999998764 3334567788888887643 2456799999999 77664
No 170
>PLN02228 Phosphoinositide phospholipase C
Probab=31.21 E-value=1.5e+02 Score=30.26 Aligned_cols=70 Identities=17% Similarity=0.196 Sum_probs=50.4
Q ss_pred ccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCC----CCCcccHHHHHHHHHhh
Q 017306 192 GYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSD----RDGKVNFKEFFHGLFDL 265 (374)
Q Consensus 192 ~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d----~dG~Is~~EF~~~l~~~ 265 (374)
.....++.. +|..+-. ++.++.++|..+|....+. .......+..++..+... ..|.++.+.|...|...
T Consensus 20 ~~~~~ei~~-if~~~s~--~~~~t~~~~~~FL~~~Q~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s~ 93 (567)
T PLN02228 20 REPPVSIKR-LFEAYSR--NGKMSFDELLRFVSEVQGE-RHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFSD 93 (567)
T ss_pred CCCcHHHHH-HHHHhcC--CCccCHHHHHHHHHHhcCC-ccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcCc
Confidence 335677887 9988853 3689999999999865432 223455678888877543 34679999999988764
No 171
>PF04876 Tenui_NCP: Tenuivirus major non-capsid protein; InterPro: IPR006960 This entry contains the tenuivirus major non-capsid protein. Proteins accumulate in large amounts in tenuivirus infected cells. They are found in the inclusion bodies that are formed after infection [].
Probab=31.11 E-value=2.6e+02 Score=22.85 Aligned_cols=62 Identities=13% Similarity=0.168 Sum_probs=41.2
Q ss_pred hhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHH
Q 017306 231 PKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLP 310 (374)
Q Consensus 231 ~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~ 310 (374)
|......++.++..-|.+.+|.|++..|...+...+. ..+..-|- .+....|.+.++.
T Consensus 78 P~~~~s~Lehllg~~~~~~n~~i~~~~ff~~lQ~~lG------------------dWIT~~~L----kh~n~MSk~Qik~ 135 (175)
T PF04876_consen 78 PEFCHSFLEHLLGGEDDSTNGLIDIGKFFDILQPKLG------------------DWITKNFL----KHPNRMSKDQIKT 135 (175)
T ss_pred hHHHHHHHHHHhcCCcCCcccceeHHHHHHHHHHHhh------------------hHHHHHHH----hccchhhHHHHHH
Confidence 4555666677776666666788999999998866554 24444443 2345678777776
Q ss_pred HHHh
Q 017306 311 IIGK 314 (374)
Q Consensus 311 ~l~~ 314 (374)
++..
T Consensus 136 L~~~ 139 (175)
T PF04876_consen 136 LCEQ 139 (175)
T ss_pred HHHH
Confidence 6643
No 172
>KOG1265 consensus Phospholipase C [Lipid transport and metabolism]
Probab=31.09 E-value=2.3e+02 Score=30.46 Aligned_cols=68 Identities=15% Similarity=0.166 Sum_probs=53.7
Q ss_pred hHHHHHhhhhcCCCCCCCccHHHHHHhhccCCC-------CChhhhHHHHHHHHHHhcCCC----CCcccHHHHHHHHHh
Q 017306 196 GWWKEEHFNASDADGDGLLNLTEFNDFLHPADT-------KNPKLILWLSKEEVRERDSDR----DGKVNFKEFFHGLFD 264 (374)
Q Consensus 196 ~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~-------~~~~~~~~~~~~l~~~~D~d~----dG~Is~~EF~~~l~~ 264 (374)
..+.+ +|..+-.++.-++|.++|..+|..... ..|......+..++..+..|+ .|.++-+-|+..++.
T Consensus 221 ~eie~-iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 221 PEIEE-IFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred hhHHH-HHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhC
Confidence 44666 999998888899999999999964321 125667788999999988774 488999999987765
No 173
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=30.46 E-value=54 Score=34.06 Aligned_cols=82 Identities=21% Similarity=0.200 Sum_probs=57.9
Q ss_pred CcceecccccccccccCCCCCCcccchhHHHHHhhhhcCCCCCCCccHHHHHHhhccCCCC-----ChhhhHHHHHHHHH
Q 017306 169 DGFVSFAEYEPPTWVRNSDNNSFGYDMGWWKEEHFNASDADGDGLLNLTEFNDFLHPADTK-----NPKLILWLSKEEVR 243 (374)
Q Consensus 169 dG~Is~~EF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~-----~~~~~~~~~~~l~~ 243 (374)
+| |+++||. +. .......++. .|..+|. ++|.++.+++..++...... ....+......++.
T Consensus 2 ~~-~~~~~~~--~~--------~~~~d~~l~~-~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (646)
T KOG0039|consen 2 EG-ISFQELK--IT--------DCSYDDKLQT-FFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIME 68 (646)
T ss_pred CC-cchhhhc--cc--------CCChhHHHHH-HHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhh
Confidence 56 9999998 22 1333466777 9999998 99999999999887643211 12344555667888
Q ss_pred HhcCCCCCcccHHHHHHHHH
Q 017306 244 ERDSDRDGKVNFKEFFHGLF 263 (374)
Q Consensus 244 ~~D~d~dG~Is~~EF~~~l~ 263 (374)
..|.+..|.+.+..+...+.
T Consensus 69 ~~~~~~~~y~~~~~~~~ll~ 88 (646)
T KOG0039|consen 69 ELDPDHKGYITNEDLEILLL 88 (646)
T ss_pred hccccccceeeecchhHHHH
Confidence 89999888887777665443
No 174
>PF12174 RST: RCD1-SRO-TAF4 (RST) plant domain; InterPro: IPR022003 This domain is found in many plant proteins including SROs and RCD1s; it is required for interaction with multiple plant transcription factors.
Probab=29.78 E-value=52 Score=23.22 Aligned_cols=51 Identities=10% Similarity=0.130 Sum_probs=33.7
Q ss_pred CccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcCccchhhc
Q 017306 301 GYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIENPYVFYSA 357 (374)
Q Consensus 301 G~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~~~~f~~~ 357 (374)
-.++..-|..+|... ++......|...|+.=+.++|+-+||++..-..+|.
T Consensus 7 p~~~F~~L~~~l~~~------l~~~~~~~l~~~Y~~~k~~kIsR~~fvr~lR~IVGD 57 (70)
T PF12174_consen 7 PWMPFPMLFSALSKH------LPPSKMDLLQKHYEEFKKKKISREEFVRKLRQIVGD 57 (70)
T ss_pred CcccHHHHHHHHHHH------CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 345555555566544 456667777777777778888888888855555543
No 175
>PF01307 Plant_vir_prot: Plant viral movement protein; InterPro: IPR001896 This family of membrane/coat proteins are found in a number of different ssRNA plant virus families that include Potexvirus, Hordeivirus and Carlavirus.
Probab=28.80 E-value=78 Score=24.28 Aligned_cols=28 Identities=21% Similarity=0.333 Sum_probs=17.4
Q ss_pred CchhHHHHHHHHHHHHHHHhcCCCCCCC
Q 017306 2 GKVSLFIYVTIALLLLLLLSKSPNKPHS 29 (374)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 29 (374)
.|++++++|.+++++++++.-.--.|+.
T Consensus 8 sk~~l~~aiG~~lal~i~~ltr~tlPhv 35 (104)
T PF01307_consen 8 SKSYLAAAIGVSLALIIFTLTRSTLPHV 35 (104)
T ss_pred ccchhHHHHHHHHHHHHHHhhcCCCCCC
Confidence 3666777777777777666554345554
No 176
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=28.60 E-value=85 Score=23.79 Aligned_cols=56 Identities=21% Similarity=0.202 Sum_probs=35.8
Q ss_pred chHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHH----ccCCCCCcccHHHHhc
Q 017306 285 DAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQ----ADTDKDGRLTLLEMIE 349 (374)
Q Consensus 285 ~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~----~D~n~dG~Is~~EFl~ 349 (374)
...+..-|..+-+ ||+|....|..++ |.. -+++-+..||.. -... ...|+.+|..+
T Consensus 29 W~~VE~RFd~La~--dG~L~rs~Fg~CI---GM~---dSkeFA~eLFdALaRrr~i~-~~~I~k~eL~e 88 (100)
T PF08414_consen 29 WKEVEKRFDKLAK--DGLLPRSDFGECI---GMK---DSKEFAGELFDALARRRGIK-GDSITKDELKE 88 (100)
T ss_dssp HHHHHHHHHHH-B--TTBEEGGGHHHHH---T-----S-HHHHHHHHHHHHHHTT---SSEE-HHHHHH
T ss_pred HHHHHHHHHHhCc--CCcccHHHHHHhc---CCc---ccHHHHHHHHHHHHHhcCCc-cCCcCHHHHHH
Confidence 4567777888866 8999999999999 433 234444455444 3333 46799999888
No 177
>KOG1954 consensus Endocytosis/signaling protein EHD1 [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=28.58 E-value=45 Score=31.80 Aligned_cols=57 Identities=12% Similarity=0.133 Sum_probs=44.4
Q ss_pred HHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhHHHHHHHHHhhcCCCCcceecccccc
Q 017306 119 RLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVMHRTQREMETHDKNKDGFVSFAEYEP 179 (374)
Q Consensus 119 ~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~ 179 (374)
..-++|..+-. -+|+||-..-+.++-.. +++...+-++|+..|.|.||.++-+||.-
T Consensus 445 ~yde~fy~l~p--~~gk~sg~~ak~~mv~s--klpnsvlgkiwklad~d~dg~ld~eefal 501 (532)
T KOG1954|consen 445 TYDEIFYTLSP--VNGKLSGRNAKKEMVKS--KLPNSVLGKIWKLADIDKDGMLDDEEFAL 501 (532)
T ss_pred chHhhhhcccc--cCceeccchhHHHHHhc--cCchhHHHhhhhhhcCCcccCcCHHHHHH
Confidence 34467766664 58999988887776554 34566788999999999999999999964
No 178
>PF07879 PHB_acc_N: PHB/PHA accumulation regulator DNA-binding domain; InterPro: IPR012909 This domain is found at the N terminus of the polyhydroxyalkanoate (PHA) synthesis regulators. These regulators have been shown to directly bind DNA and PHA []. The invariant nature of this domain compared to the C-terminal IPR007897 from INTERPRO domain(s) suggests that it contains the DNA-binding function.
Probab=28.54 E-value=1.2e+02 Score=20.90 Aligned_cols=42 Identities=7% Similarity=0.188 Sum_probs=28.0
Q ss_pred hhcCCCCCCCccHHHHHHhhccCC-------CCChhhhHHHHHHHHHHh
Q 017306 204 NASDADGDGLLNLTEFNDFLHPAD-------TKNPKLILWLSKEEVRER 245 (374)
Q Consensus 204 ~~~D~d~dG~Is~~E~~~~l~~~~-------~~~~~~~~~~~~~l~~~~ 245 (374)
+.||+..+.+||.+++.+++..-. .....++...+-+++-+-
T Consensus 10 RLYDT~~s~YiTL~di~~lV~~g~~~~V~D~ktgeDiT~~iL~QIi~e~ 58 (64)
T PF07879_consen 10 RLYDTETSSYITLEDIAQLVREGEDFKVVDAKTGEDITRSILLQIILEE 58 (64)
T ss_pred ccccCCCceeEeHHHHHHHHHCCCeEEEEECCCCcccHHHHHHHHHHHH
Confidence 468999999999999999886431 112445555555554443
No 179
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=28.53 E-value=84 Score=29.84 Aligned_cols=66 Identities=11% Similarity=0.051 Sum_probs=50.2
Q ss_pred HHHHHhhhcccCCCCCCCcccHHHHHHHHHHhchhhhH-HHHHHHHHhhcCCCCcceecccccccccc
Q 017306 117 TDRLVLLFPKIDVNPADGYINEDELTDWNMQQAERDVM-HRTQREMETHDKNKDGFVSFAEYEPPTWV 183 (374)
Q Consensus 117 ~~~l~~~F~~~D~d~~dG~Is~~El~~~l~~~~~~~~~-~~~~~~~~~~D~d~dG~Is~~EF~~~~~~ 183 (374)
.+.+++.|...|.. ++|+|+..-+..++..++...++ +.+.-+=+.+|..+-|.|-.+.|...+..
T Consensus 308 s~q~rR~f~a~d~~-d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~~~p 374 (449)
T KOG2871|consen 308 SEQLRRNFHAYDPE-DNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILLEDFLGEFFP 374 (449)
T ss_pred CHHHHhhhhccCcc-CCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEeccccccccC
Confidence 56788999999999 99999999999999988744443 33333345678888888888888776653
No 180
>PF09068 EF-hand_2: EF hand; InterPro: IPR015153 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=27.75 E-value=1.5e+02 Score=23.66 Aligned_cols=64 Identities=14% Similarity=0.273 Sum_probs=40.1
Q ss_pred hHHHHHhhhhccCC--CCccCHHhHHHHHHhhC-------CCccc--------chHHHHHHHHHHccCCCCCcccHHHHh
Q 017306 286 APARQLFGQLDKDG--DGYLSDVELLPIIGKLH-------PSERY--------YAKQQADYIISQADTDKDGRLTLLEMI 348 (374)
Q Consensus 286 ~~~~~~F~~~D~d~--dG~Is~~El~~~l~~l~-------~~~~~--------~~~~~~~~l~~~~D~n~dG~Is~~EFl 348 (374)
..+..+|.....+. +..|+..++..++..+. |.... .++--+.-++..+|..++|+|+.-.|.
T Consensus 41 ~~v~~~f~~~~l~~~~d~~l~v~~l~~~L~~iy~~l~~~~p~~~~i~~~~v~~a~~L~ln~Ll~vyD~~rtG~I~vls~K 120 (127)
T PF09068_consen 41 SNVIEAFREHGLNQSNDSSLSVSQLETLLSSIYEFLNKRLPTLHQIPSRPVDLAVDLLLNWLLNVYDSQRTGKIRVLSFK 120 (127)
T ss_dssp HHHHHHHHHTT---T-TSEEEHHHHHHHHHHHHHHHHHHSTTS--HH-----HHHHHHHHHHHHHH-TT--SEEEHHHHH
T ss_pred HHHHHHHHHcCCCcccCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCchhHHHHHHHHHHHHHHHhCCCCCCeeehhHHH
Confidence 35567777665443 47799999999998765 33221 123346778889999999999988775
Q ss_pred c
Q 017306 349 E 349 (374)
Q Consensus 349 ~ 349 (374)
-
T Consensus 121 v 121 (127)
T PF09068_consen 121 V 121 (127)
T ss_dssp H
T ss_pred H
Confidence 4
No 181
>KOG0039 consensus Ferric reductase, NADH/NADPH oxidase and related proteins [Inorganic ion transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=27.40 E-value=78 Score=32.88 Aligned_cols=79 Identities=25% Similarity=0.411 Sum_probs=56.4
Q ss_pred CCcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhccCCCCccCHHhHHHHHHhhCC-C----cccchH
Q 017306 250 DGKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHP-S----ERYYAK 324 (374)
Q Consensus 250 dG~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~-~----~~~~~~ 324 (374)
+| |+++||. + . ....+..++-.|..+|. ++|.++.+|+..++..... + -...+.
T Consensus 2 ~~-~~~~~~~--~----~-------------~~~~d~~l~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (646)
T KOG0039|consen 2 EG-ISFQELK--I----T-------------DCSYDDKLQTFFDMYDK-GDGKLTEEEVRELIMSSISANWLSLIKKQTE 60 (646)
T ss_pred CC-cchhhhc--c----c-------------CCChhHHHHHHHHHHhh-hcCCccHHHHHHHHHHHHHhhhhhhhhhhhh
Confidence 56 8899988 1 1 34556788999999998 9999999999988874320 1 122345
Q ss_pred HHHHHHHHHccCCCCCcccHHHHhc
Q 017306 325 QQADYIISQADTDKDGRLTLLEMIE 349 (374)
Q Consensus 325 ~~~~~l~~~~D~n~dG~Is~~EFl~ 349 (374)
+....++...|.+..|.+.+..+.-
T Consensus 61 ~~~~~~~~~~~~~~~~y~~~~~~~~ 85 (646)
T KOG0039|consen 61 EYAALIMEELDPDHKGYITNEDLEI 85 (646)
T ss_pred HHHHHhhhhccccccceeeecchhH
Confidence 5678888899999888766555433
No 182
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=26.82 E-value=2.6e+02 Score=22.68 Aligned_cols=69 Identities=6% Similarity=0.038 Sum_probs=38.1
Q ss_pred CcccHHHHHHHHHhhhhccCcCCCCCCCCCCCCCchHHHHHhhhhcc-------CCCCccCHHhHHHHHHhhCCCcccch
Q 017306 251 GKVNFKEFFHGLFDLVRNYDDEGHNSSHPSDDTMDAPARQLFGQLDK-------DGDGYLSDVELLPIIGKLHPSERYYA 323 (374)
Q Consensus 251 G~Is~~EF~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~-------d~dG~Is~~El~~~l~~l~~~~~~~~ 323 (374)
+.|+-.||.+ +...... ....++.+.+.|.. +..+.|+.+-|+..|+.+- +..++
T Consensus 6 ~~lsp~eF~q-Lq~y~ey---------------s~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yL--e~d~P 67 (138)
T PF14513_consen 6 VSLSPEEFAQ-LQKYSEY---------------STKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYL--EVDLP 67 (138)
T ss_dssp S-S-HHHHHH-HHHHHHH-------------------HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHT--T-S--
T ss_pred eccCHHHHHH-HHHHHHH---------------HHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHH--cCCCC
Confidence 5678888877 4433331 11245555544432 2346899999999999874 44478
Q ss_pred HHHHHHHHHHccCC
Q 017306 324 KQQADYIISQADTD 337 (374)
Q Consensus 324 ~~~~~~l~~~~D~n 337 (374)
.+-+.+||..+-..
T Consensus 68 ~~lc~hLF~sF~~~ 81 (138)
T PF14513_consen 68 EDLCQHLFLSFQKK 81 (138)
T ss_dssp HHHHHHHHHHS---
T ss_pred HHHHHHHHHHHhCc
Confidence 88899999987643
No 183
>TIGR01848 PHA_reg_PhaR polyhydroxyalkanoate synthesis repressor PhaR. Poly-B-hydroxyalkanoates are lipidlike carbon/energy storage polymers found in granular inclusions. PhaR is a regulatory protein found in general near other proteins associated with polyhydroxyalkanoate (PHA) granule biosynthesis and utilization. It is found to be a DNA-binding homotetramer that is also capable of binding short chain hydroxyalkanoic acids and PHA granules. PhaR may regulate the expression of itself, of the phasins that coat granules, and of enzymes that direct carbon flux into polymers stored in granules.
Probab=25.26 E-value=3e+02 Score=21.16 Aligned_cols=52 Identities=12% Similarity=0.196 Sum_probs=38.1
Q ss_pred hhcCCCCCCCccHHHHHHhhccCC-------CCChhhhHHHHHHHHHHhcCCCCCcccH
Q 017306 204 NASDADGDGLLNLTEFNDFLHPAD-------TKNPKLILWLSKEEVRERDSDRDGKVNF 255 (374)
Q Consensus 204 ~~~D~d~dG~Is~~E~~~~l~~~~-------~~~~~~~~~~~~~l~~~~D~d~dG~Is~ 255 (374)
+.||+..+-+||.+++++++..-. .....++...+-+++-+-...+...++-
T Consensus 10 RLYDT~tS~YITLedi~~lV~~g~~f~V~DakTgeDiT~~iL~QII~E~E~~g~~~lp~ 68 (107)
T TIGR01848 10 RLYDTETSSYVTLEDIRDLVREGREFQVVDSKSGDDLTRSILLQIIAEEESGGEPVLST 68 (107)
T ss_pred cccCCCccceeeHHHHHHHHHCCCeEEEEECCCCchhHHHHHHHHHHHHHhCCCCCCCH
Confidence 468999999999999999886431 1236777777888877776666655554
No 184
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=24.61 E-value=2.3e+02 Score=21.48 Aligned_cols=61 Identities=18% Similarity=0.198 Sum_probs=36.1
Q ss_pred HHHHhhhhcCCCCCCCccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCCCcccHHHHHHHHHh
Q 017306 198 WKEEHFNASDADGDGLLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRDGKVNFKEFFHGLFD 264 (374)
Q Consensus 198 ~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~ 264 (374)
+.. -|..+-. +|.|....|.+++.... ..+...+..+.+-+.-... ...|+.+|.......
T Consensus 32 VE~-RFd~La~--dG~L~rs~Fg~CIGM~d--SkeFA~eLFdALaRrr~i~-~~~I~k~eL~efW~q 92 (100)
T PF08414_consen 32 VEK-RFDKLAK--DGLLPRSDFGECIGMKD--SKEFAGELFDALARRRGIK-GDSITKDELKEFWEQ 92 (100)
T ss_dssp HHH-HHHHH-B--TTBEEGGGHHHHHT--S---HHHHHHHHHHHHHHTT---SSEE-HHHHHHHHHH
T ss_pred HHH-HHHHhCc--CCcccHHHHHHhcCCcc--cHHHHHHHHHHHHHhcCCc-cCCcCHHHHHHHHHH
Confidence 445 7887755 89999999999987432 1344444444444444444 467999988875443
No 185
>PHA02105 hypothetical protein
Probab=24.58 E-value=1.1e+02 Score=20.57 Aligned_cols=50 Identities=12% Similarity=0.008 Sum_probs=29.9
Q ss_pred CccHHHHHHhhccCCCCChhhhHHHHHHHHHHhcCCCC--CcccHHHHHHHH
Q 017306 213 LLNLTEFNDFLHPADTKNPKLILWLSKEEVRERDSDRD--GKVNFKEFFHGL 262 (374)
Q Consensus 213 ~Is~~E~~~~l~~~~~~~~~~~~~~~~~l~~~~D~d~d--G~Is~~EF~~~l 262 (374)
+++++|+..++.......-.+..+.++++-..+..-.- -.++|+||-..|
T Consensus 4 klt~~~~~~a~~~ndq~eyp~~~e~~~ql~svfsipqi~yvyls~~e~~si~ 55 (68)
T PHA02105 4 KLTKEDWESAKYQNDQNEYPVELELFDQLKTVFSIPQIKYVYLSYEEFNSIM 55 (68)
T ss_pred eecHHHHHHHHHcCccccccccHHHHHHHHHhccccceEEEEEeHHHhcccc
Confidence 46778888777654432233445555665555554433 348999998743
No 186
>PF14991 MLANA: Protein melan-A; PDB: 2GTZ_F 2GT9_F 3MRO_P 2GUO_C 3MRQ_P 2GTW_C 3L6F_C 3MRP_P.
Probab=24.50 E-value=20 Score=27.67 Aligned_cols=18 Identities=22% Similarity=0.209 Sum_probs=0.5
Q ss_pred HHHHHHHHHHHHHHHhcC
Q 017306 6 LFIYVTIALLLLLLLSKS 23 (374)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~ 23 (374)
.|++|++|++|++=|-|.
T Consensus 30 GiL~VILgiLLliGCWYc 47 (118)
T PF14991_consen 30 GILIVILGILLLIGCWYC 47 (118)
T ss_dssp S-----------------
T ss_pred eeHHHHHHHHHHHhheee
Confidence 466777777777777776
No 187
>PRK14750 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=24.44 E-value=1.3e+02 Score=17.06 Aligned_cols=20 Identities=25% Similarity=0.147 Sum_probs=9.0
Q ss_pred CCchhHHHHHHHHHHHHHHH
Q 017306 1 MGKVSLFIYVTIALLLLLLL 20 (374)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~ 20 (374)
|+-.++.-.|++.+++-+++
T Consensus 1 Ms~~vi~g~llv~lLl~YLv 20 (29)
T PRK14750 1 MNFSIVCGALLVLLLLGYLV 20 (29)
T ss_pred CcHHHHHHHHHHHHHHHHHH
Confidence 44444444444444444333
No 188
>PHA02291 hypothetical protein
Probab=24.37 E-value=70 Score=24.36 Aligned_cols=21 Identities=24% Similarity=0.341 Sum_probs=14.6
Q ss_pred chhHHHHHHHHHHHHHHHhcC
Q 017306 3 KVSLFIYVTIALLLLLLLSKS 23 (374)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~ 23 (374)
|+.+++++++|.+++..++|+
T Consensus 4 K~~iFYiL~~~VL~~si~sY~ 24 (132)
T PHA02291 4 KASIFYILVVIVLAFSISSYY 24 (132)
T ss_pred chhhHHHHHHHHHHHHHHHHh
Confidence 466777777777777666665
No 189
>PF11119 DUF2633: Protein of unknown function (DUF2633); InterPro: IPR022576 This family is conserved largely in Proteobacteria. Several members are named as YfgG. The function is not known.
Probab=23.30 E-value=80 Score=21.39 Aligned_cols=7 Identities=29% Similarity=0.667 Sum_probs=3.2
Q ss_pred CCchhHH
Q 017306 1 MGKVSLF 7 (374)
Q Consensus 1 ~~~~~~~ 7 (374)
|+|.|++
T Consensus 9 mtriVLL 15 (59)
T PF11119_consen 9 MTRIVLL 15 (59)
T ss_pred HHHHHHH
Confidence 4554333
No 190
>KOG3449 consensus 60S acidic ribosomal protein P2 [Translation, ribosomal structure and biogenesis]
Probab=22.77 E-value=3.6e+02 Score=20.85 Aligned_cols=54 Identities=13% Similarity=0.236 Sum_probs=42.5
Q ss_pred HHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCCCCcccHHHHhcC
Q 017306 289 RQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDKDGRLTLLEMIEN 350 (374)
Q Consensus 289 ~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~dG~Is~~EFl~~ 350 (374)
..+|-.++.-++-..+..+++.+|...+.. ...+.++.+++.+. |+ +.+|.+..
T Consensus 4 vaAYLL~~lgGn~~psa~DikkIl~sVG~E---~d~e~i~~visel~----GK-~i~ElIA~ 57 (112)
T KOG3449|consen 4 VAAYLLAVLGGNASPSASDIKKILESVGAE---IDDERINLVLSELK----GK-DIEELIAA 57 (112)
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHhCcc---cCHHHHHHHHHHhc----CC-CHHHHHHH
Confidence 456777778888889999999999998643 66888999998885 44 78887763
No 191
>PF05984 Cytomega_UL20A: Cytomegalovirus UL20A protein; InterPro: IPR009245 This family consists of several Cytomegalovirus UL20A proteins. UL20A is thought to be a glycoprotein [].
Probab=22.56 E-value=1.1e+02 Score=22.22 Aligned_cols=11 Identities=9% Similarity=0.157 Sum_probs=6.7
Q ss_pred CCchhHHHHHH
Q 017306 1 MGKVSLFIYVT 11 (374)
Q Consensus 1 ~~~~~~~~~~~ 11 (374)
|+|.+.|+-|+
T Consensus 1 MaRRlwiLslL 11 (100)
T PF05984_consen 1 MARRLWILSLL 11 (100)
T ss_pred CchhhHHHHHH
Confidence 88876555433
No 192
>KOG2871 consensus Uncharacterized conserved protein [Function unknown]
Probab=21.96 E-value=97 Score=29.43 Aligned_cols=64 Identities=16% Similarity=0.245 Sum_probs=46.0
Q ss_pred CchHHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchH-HHHHHHHHHccCCCCCcccHHHHhcC
Q 017306 284 MDAPARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAK-QQADYIISQADTDKDGRLTLLEMIEN 350 (374)
Q Consensus 284 ~~~~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~-~~~~~l~~~~D~n~dG~Is~~EFl~~ 350 (374)
..+.+++.|..+|+.+.|+|+-.-++.++..+. ..+++ +.+..+=..+|...-|.|-...|+..
T Consensus 307 ~s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N---~~vse~a~v~l~~~~l~pE~~~iil~~d~lg~ 371 (449)
T KOG2871|consen 307 PSEQLRRNFHAYDPEDNNFISCSGLQIVMTALN---RLVSEPAYVMLMRQPLDPESLGIILLEDFLGE 371 (449)
T ss_pred CCHHHHhhhhccCccCCCeeecHHHHHHHHHhc---ccccCHHHHHHhcCccChhhcceEEecccccc
Confidence 357899999999999999999998888887763 22333 33433344477777777777777663
No 193
>PF03979 Sigma70_r1_1: Sigma-70 factor, region 1.1; InterPro: IPR007127 The bacterial core RNA polymerase complex, which consists of five subunits, is sufficient for transcription elongation and termination but is unable to initiate transcription. Transcription initiation from promoter elements requires a sixth, dissociable subunit called a sigma factor, which reversibly associates with the core RNA polymerase complex to form a holoenzyme []. RNA polymerase recruits alternative sigma factors as a means of switching on specific regulons. Most bacteria express a multiplicity of sigma factors. Two of these factors, sigma-70 (gene rpoD), generally known as the major or primary sigma factor, and sigma-54 (gene rpoN or ntrA) direct the transcription of a wide variety of genes. The other sigma factors, known as alternative sigma factors, are required for the transcription of specific subsets of genes. With regard to sequence similarity, sigma factors can be grouped into two classes, the sigma-54 and sigma-70 families. Sequence alignments of the sigma70 family members reveal four conserved regions that can be further divided into subregions eg. sub-region 2.2, which may be involved in the binding of the sigma factor to the core RNA polymerase; and sub-region 4.2, which seems to harbor a DNA-binding 'helix-turn-helix' motif involved in binding the conserved -35 region of promoters recognised by the major sigma factors [, ]. This entry represents Region 1.1 which modulates DNA binding by region 2 and 4 when sigma is unbound by the core RNA polymerase [, ]. Region 1.1 is also involved in promoter binding.; GO: 0003677 DNA binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2K6X_A.
Probab=21.90 E-value=1.2e+02 Score=21.99 Aligned_cols=45 Identities=18% Similarity=0.211 Sum_probs=27.0
Q ss_pred HHHHHhhhhccCCCCccCHHhHHHHHHhhCCCcccchHHHHHHHHHHccCCC
Q 017306 287 PARQLFGQLDKDGDGYLSDVELLPIIGKLHPSERYYAKQQADYIISQADTDK 338 (374)
Q Consensus 287 ~~~~~F~~~D~d~dG~Is~~El~~~l~~l~~~~~~~~~~~~~~l~~~~D~n~ 338 (374)
.++++...- ...|+||.+|+...|... .++.++++.++..+...|
T Consensus 8 ~i~~Li~~g--K~~G~lT~~eI~~~L~~~-----~~~~e~id~i~~~L~~~g 52 (82)
T PF03979_consen 8 AIKKLIEKG--KKKGYLTYDEINDALPED-----DLDPEQIDEIYDTLEDEG 52 (82)
T ss_dssp HHHHHHHHH--HHHSS-BHHHHHHH-S-S--------HHHHHHHHHHHHTT-
T ss_pred HHHHHHHHH--hhcCcCCHHHHHHHcCcc-----CCCHHHHHHHHHHHHHCC
Confidence 344444432 246899999999998433 367889999998877554
No 194
>PRK14748 kdpF potassium-transporting ATPase subunit F; Provisional
Probab=21.77 E-value=1.6e+02 Score=16.73 Aligned_cols=16 Identities=25% Similarity=0.175 Sum_probs=6.7
Q ss_pred CCchhHHHHHHHHHHH
Q 017306 1 MGKVSLFIYVTIALLL 16 (374)
Q Consensus 1 ~~~~~~~~~~~~~~~~ 16 (374)
|+-.++...|++.+++
T Consensus 1 Ms~~vi~G~ilv~lLl 16 (29)
T PRK14748 1 MSAGVITGVLLVFLLL 16 (29)
T ss_pred CcHHHHHHHHHHHHHH
Confidence 4444444444433333
No 195
>COG3763 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.30 E-value=1.7e+02 Score=20.65 Aligned_cols=32 Identities=16% Similarity=0.160 Sum_probs=28.9
Q ss_pred CCcccHHHHHHHHHHhchhhhHHHHHHHHHhh
Q 017306 133 DGYINEDELTDWNMQQAERDVMHRTQREMETH 164 (374)
Q Consensus 133 dG~Is~~El~~~l~~~~~~~~~~~~~~~~~~~ 164 (374)
+--|+.+-++..+.+.|.++++..+.++++..
T Consensus 36 NPpine~~iR~M~~qmGqKpSe~kI~Qvm~~i 67 (71)
T COG3763 36 NPPINEEMIRMMMAQMGQKPSEKKINQVMRSI 67 (71)
T ss_pred CCCCCHHHHHHHHHHhCCCchHHHHHHHHHHH
Confidence 45899999999999999999999999998765
No 196
>PLN02223 phosphoinositide phospholipase C
Probab=20.56 E-value=2.3e+02 Score=28.61 Aligned_cols=71 Identities=10% Similarity=-0.011 Sum_probs=0.0
Q ss_pred cccchhHHHHHhhhhcCCCCCCCccHHHHHHhh---ccCCCCChhhhHHHHHHHHHHhcCCCC--------CcccHHHHH
Q 017306 191 FGYDMGWWKEEHFNASDADGDGLLNLTEFNDFL---HPADTKNPKLILWLSKEEVRERDSDRD--------GKVNFKEFF 259 (374)
Q Consensus 191 ~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l---~~~~~~~~~~~~~~~~~l~~~~D~d~d--------G~Is~~EF~ 259 (374)
.....+.++. +|..+ ..+.|.++.+.+.++| ....+. ...+.+.++.++..+-.... +.++.+.|.
T Consensus 11 ~~~~p~~v~~-~f~~~-~~~~~~m~~~~l~~fl~~l~~~q~e-~~~~~~~a~~i~~~~~~~~~~~~~~~~~~~l~~~~f~ 87 (537)
T PLN02223 11 PANQPDLILN-FFGNE-FHGYDDDMPELLPRFIELLDTEKDE-DGAGLNAAEKIAAELKRRKCDILAFRNLRCLELDHLN 87 (537)
T ss_pred CCCCcHHHHH-HHHHh-hcCCCCCCHHHHHHHHHHHHHhccc-ccCCHHHHHHHHHHHHhhcccchhhhhccccCHHHHH
Q ss_pred HHHHh
Q 017306 260 HGLFD 264 (374)
Q Consensus 260 ~~l~~ 264 (374)
..|..
T Consensus 88 ~~L~s 92 (537)
T PLN02223 88 EFLFS 92 (537)
T ss_pred HHhcC
Done!