Query 017314
Match_columns 373
No_of_seqs 363 out of 2895
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 12:26:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017314.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017314hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1got_B GT-beta; complex (GTP-b 100.0 1.8E-52 6.3E-57 377.9 47.7 292 77-373 44-340 (340)
2 1vyh_C Platelet-activating fac 100.0 1.1E-53 3.7E-58 395.6 40.5 287 81-373 101-408 (410)
3 2pbi_B Guanine nucleotide-bind 100.0 1.3E-51 4.3E-56 374.4 44.7 293 77-373 53-354 (354)
4 3ow8_A WD repeat-containing pr 100.0 6.2E-52 2.1E-56 371.3 40.9 287 81-373 25-318 (321)
5 2ynn_A Coatomer subunit beta'; 100.0 5.4E-51 1.8E-55 362.5 42.7 287 80-371 5-298 (304)
6 3iz6_a 40S ribosomal protein R 100.0 6.3E-52 2.1E-56 380.1 33.7 295 78-373 56-372 (380)
7 4ery_A WD repeat-containing pr 100.0 1E-49 3.4E-54 355.4 44.0 292 80-373 15-309 (312)
8 3frx_A Guanine nucleotide-bind 100.0 5.3E-49 1.8E-53 352.0 42.0 285 80-373 9-314 (319)
9 1erj_A Transcriptional repress 100.0 2.4E-48 8.3E-53 357.8 41.3 281 86-373 62-386 (393)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 2E-48 6.8E-53 352.2 39.9 290 79-373 6-332 (345)
11 2xzm_R RACK1; ribosome, transl 100.0 6E-48 2.1E-52 348.7 40.8 286 79-373 12-337 (343)
12 1nr0_A Actin interacting prote 100.0 2E-48 6.9E-53 378.2 39.6 305 52-373 163-608 (611)
13 4gqb_B Methylosome protein 50; 100.0 2.4E-48 8.2E-53 351.0 35.9 280 86-373 28-328 (344)
14 2hes_X YDR267CP; beta-propelle 100.0 3.1E-47 1.1E-51 342.2 41.4 286 79-373 5-325 (330)
15 4g56_B MGC81050 protein; prote 100.0 3.3E-48 1.1E-52 352.2 34.2 282 85-373 39-340 (357)
16 1nr0_A Actin interacting prote 100.0 3.7E-46 1.3E-50 362.3 40.0 288 80-373 51-352 (611)
17 2ymu_A WD-40 repeat protein; u 100.0 1.2E-45 4E-50 356.1 42.7 283 79-373 294-577 (577)
18 4aow_A Guanine nucleotide-bind 100.0 5E-45 1.7E-49 328.1 42.8 286 80-373 30-334 (340)
19 3zwl_B Eukaryotic translation 100.0 9.7E-45 3.3E-49 329.4 41.9 286 80-373 24-343 (369)
20 3dm0_A Maltose-binding peripla 100.0 7.3E-45 2.5E-49 358.4 41.1 286 80-373 374-690 (694)
21 1sq9_A Antiviral protein SKI8; 100.0 5.7E-45 1.9E-49 335.0 35.9 285 80-373 8-392 (397)
22 2ymu_A WD-40 repeat protein; u 100.0 1.3E-43 4.6E-48 341.8 44.0 283 79-373 253-536 (577)
23 3ei3_B DNA damage-binding prot 100.0 5.1E-44 1.8E-48 327.5 37.7 286 80-373 65-379 (383)
24 1vyh_C Platelet-activating fac 100.0 2.3E-44 7.8E-49 333.1 35.3 248 79-332 141-409 (410)
25 2ynn_A Coatomer subunit beta'; 100.0 5.6E-44 1.9E-48 317.3 36.2 247 122-373 5-256 (304)
26 3ow8_A WD repeat-containing pr 100.0 5.4E-44 1.8E-48 319.8 36.0 270 51-333 50-320 (321)
27 1gxr_A ESG1, transducin-like e 100.0 9.1E-43 3.1E-47 312.6 41.7 281 83-373 46-334 (337)
28 3i2n_A WD repeat-containing pr 100.0 1.1E-43 3.7E-48 321.4 35.9 291 77-373 7-350 (357)
29 3odt_A Protein DOA1; ubiquitin 100.0 5.8E-43 2E-47 310.8 39.5 281 78-373 8-293 (313)
30 1r5m_A SIR4-interacting protei 100.0 1.3E-43 4.5E-48 328.0 36.2 279 86-373 106-422 (425)
31 3gre_A Serine/threonine-protei 100.0 4.3E-44 1.5E-48 333.8 32.6 295 78-373 52-437 (437)
32 3k26_A Polycomb protein EED; W 100.0 7.5E-44 2.6E-48 323.4 33.2 284 83-373 13-363 (366)
33 4gqb_B Methylosome protein 50; 100.0 3.7E-43 1.3E-47 317.0 34.1 246 85-337 79-334 (344)
34 3vl1_A 26S proteasome regulato 100.0 1.8E-43 6E-48 327.6 32.8 282 85-373 95-416 (420)
35 1k8k_C P40, ARP2/3 complex 41 100.0 5.3E-43 1.8E-47 318.8 35.3 283 84-373 4-358 (372)
36 3frx_A Guanine nucleotide-bind 100.0 1.9E-42 6.4E-47 309.6 37.3 277 51-335 32-318 (319)
37 1got_B GT-beta; complex (GTP-b 100.0 2.8E-42 9.7E-47 311.2 36.8 246 80-331 89-340 (340)
38 2pm9_A Protein WEB1, protein t 100.0 4.4E-44 1.5E-48 331.0 25.1 283 86-373 65-411 (416)
39 4e54_B DNA damage-binding prot 100.0 4.6E-43 1.6E-47 326.9 31.7 289 81-373 112-427 (435)
40 1r5m_A SIR4-interacting protei 100.0 2.3E-42 7.9E-47 319.7 35.4 279 86-373 43-358 (425)
41 2j04_B YDR362CP, TAU91; beta p 100.0 7.5E-44 2.6E-48 337.5 25.9 313 50-373 174-514 (524)
42 4gga_A P55CDC, cell division c 100.0 1.5E-41 5.1E-46 315.3 40.9 287 76-373 89-392 (420)
43 2pm7_B Protein transport prote 100.0 4.9E-42 1.7E-46 303.8 35.1 248 82-373 3-282 (297)
44 4ggc_A P55CDC, cell division c 100.0 4.7E-41 1.6E-45 299.3 40.6 287 76-373 9-312 (318)
45 4a11_B DNA excision repair pro 100.0 2.5E-41 8.5E-46 311.3 39.9 292 80-373 35-362 (408)
46 4h5i_A Guanine nucleotide-exch 100.0 6.8E-43 2.3E-47 318.2 29.0 278 88-373 14-340 (365)
47 4aez_A CDC20, WD repeat-contai 100.0 9.6E-42 3.3E-46 314.6 36.3 281 84-373 87-377 (401)
48 2pm9_A Protein WEB1, protein t 100.0 3E-43 1E-47 325.4 26.1 281 89-373 13-334 (416)
49 3dwl_C Actin-related protein 2 100.0 1.3E-43 4.4E-48 324.0 23.0 281 85-373 8-376 (377)
50 2pbi_B Guanine nucleotide-bind 100.0 1.5E-41 5.2E-46 308.1 36.3 249 79-331 97-354 (354)
51 3v7d_B Cell division control p 100.0 2.9E-41 9.9E-46 317.1 39.2 281 80-373 113-418 (464)
52 3mkq_A Coatomer beta'-subunit; 100.0 2.1E-41 7.1E-46 339.3 39.6 288 80-372 5-298 (814)
53 3sfz_A APAF-1, apoptotic pepti 100.0 3.6E-41 1.2E-45 352.1 41.6 289 80-373 607-910 (1249)
54 2ovr_B FBW7, F-BOX/WD repeat p 100.0 9.7E-41 3.3E-45 312.0 39.8 280 79-373 150-439 (445)
55 3dw8_B Serine/threonine-protei 100.0 2.2E-41 7.6E-46 315.9 35.2 282 86-372 26-442 (447)
56 2oaj_A Protein SNI1; WD40 repe 100.0 2.5E-41 8.5E-46 340.5 37.2 187 51-250 31-247 (902)
57 4g56_B MGC81050 protein; prote 100.0 1.1E-41 3.9E-46 309.2 30.9 248 83-337 89-346 (357)
58 3iz6_a 40S ribosomal protein R 100.0 4E-42 1.4E-46 314.9 28.2 276 52-336 81-377 (380)
59 3vl1_A 26S proteasome regulato 100.0 3.9E-42 1.3E-46 318.6 28.1 278 90-373 58-362 (420)
60 3sfz_A APAF-1, apoptotic pepti 100.0 3.7E-41 1.2E-45 352.0 38.4 293 79-373 648-1031(1249)
61 3mmy_A MRNA export factor; mRN 100.0 7.5E-41 2.6E-45 303.6 35.6 293 76-372 27-342 (368)
62 3v7d_B Cell division control p 100.0 3.7E-40 1.3E-44 309.5 40.9 280 79-372 153-459 (464)
63 1yfq_A Cell cycle arrest prote 100.0 2.2E-41 7.6E-46 304.7 31.2 278 84-368 7-315 (342)
64 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.8E-40 1.3E-44 308.0 39.6 274 81-373 111-388 (445)
65 1p22_A F-BOX/WD-repeat protein 100.0 2.1E-40 7.2E-45 308.9 37.7 269 85-373 130-411 (435)
66 3f3f_A Nucleoporin SEH1; struc 100.0 5.9E-41 2E-45 301.5 32.2 287 82-373 5-334 (351)
67 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.1E-40 7.1E-45 299.6 34.4 283 51-341 30-342 (345)
68 1gxr_A ESG1, transducin-like e 100.0 2.2E-40 7.5E-45 297.1 33.4 278 87-373 8-293 (337)
69 2xzm_R RACK1; ribosome, transl 100.0 6.2E-40 2.1E-44 296.2 36.3 279 51-336 41-342 (343)
70 1pgu_A Actin interacting prote 100.0 5.1E-40 1.7E-44 318.7 38.0 286 79-373 54-363 (615)
71 2hes_X YDR267CP; beta-propelle 100.0 4.4E-40 1.5E-44 295.6 34.7 272 51-334 26-328 (330)
72 1pgu_A Actin interacting prote 100.0 2.6E-39 8.7E-44 313.7 41.1 285 80-373 152-569 (615)
73 4ery_A WD repeat-containing pr 100.0 4E-39 1.4E-43 286.8 37.5 268 52-333 38-311 (312)
74 3bg1_A Protein SEC13 homolog; 100.0 4.6E-41 1.6E-45 300.2 24.9 247 82-333 7-292 (316)
75 1erj_A Transcriptional repress 100.0 3.5E-39 1.2E-43 296.7 37.1 241 89-335 124-390 (393)
76 2oaj_A Protein SNI1; WD40 repe 100.0 7.6E-40 2.6E-44 329.7 34.9 304 52-373 72-658 (902)
77 3bg1_A Protein SEC13 homolog; 100.0 1E-40 3.4E-45 298.0 24.4 244 125-373 8-290 (316)
78 3dm0_A Maltose-binding peripla 100.0 8.3E-39 2.8E-43 315.2 36.1 253 79-334 421-693 (694)
79 3mkq_A Coatomer beta'-subunit; 100.0 2.4E-38 8.1E-43 317.1 36.7 306 52-373 28-383 (814)
80 2aq5_A Coronin-1A; WD40 repeat 100.0 4.9E-39 1.7E-43 296.5 28.8 278 91-373 37-339 (402)
81 3jrp_A Fusion protein of prote 100.0 5.5E-38 1.9E-42 286.0 32.0 254 80-334 3-287 (379)
82 3jrp_A Fusion protein of prote 100.0 1.4E-37 4.6E-42 283.4 33.7 249 120-373 1-284 (379)
83 4aow_A Guanine nucleotide-bind 100.0 7.6E-37 2.6E-41 274.7 37.4 279 51-336 53-339 (340)
84 2j04_B YDR362CP, TAU91; beta p 100.0 6.3E-39 2.2E-43 303.8 24.9 266 80-373 126-425 (524)
85 1sq9_A Antiviral protein SKI8; 100.0 1.1E-37 3.6E-42 286.5 30.4 281 50-336 27-397 (397)
86 3gre_A Serine/threonine-protei 100.0 4.9E-38 1.7E-42 292.8 24.3 268 96-373 35-356 (437)
87 3lrv_A PRE-mRNA-splicing facto 100.0 7.7E-38 2.6E-42 282.5 24.8 265 95-372 43-329 (343)
88 4aez_A CDC20, WD repeat-contai 100.0 3.4E-36 1.2E-40 277.5 35.5 248 86-342 132-388 (401)
89 4gq1_A NUP37; propeller, trans 100.0 2.9E-38 9.9E-43 290.6 21.3 256 85-369 86-383 (393)
90 3ei3_B DNA damage-binding prot 100.0 1.6E-36 5.3E-41 277.8 32.6 243 85-334 115-382 (383)
91 3vu4_A KMHSV2; beta-propeller 100.0 1.6E-36 5.5E-41 275.1 32.0 276 81-373 12-333 (355)
92 4gga_A P55CDC, cell division c 100.0 3.4E-36 1.2E-40 279.2 34.6 263 83-354 142-415 (420)
93 2vdu_B TRNA (guanine-N(7)-)-me 100.0 2.1E-36 7.2E-41 283.1 33.5 279 89-372 5-387 (450)
94 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-37 4.5E-42 289.2 23.3 257 88-373 15-294 (588)
95 1k8k_C P40, ARP2/3 complex 41 100.0 3.6E-36 1.2E-40 273.6 32.5 242 126-373 4-271 (372)
96 3bws_A Protein LP49; two-domai 100.0 1.6E-35 5.6E-40 275.3 37.4 282 82-373 117-429 (433)
97 3jro_A Fusion protein of prote 100.0 3.6E-37 1.2E-41 305.7 27.1 252 82-334 3-285 (753)
98 3dwl_C Actin-related protein 2 100.0 4E-38 1.4E-42 287.6 18.6 240 127-372 8-278 (377)
99 3i2n_A WD repeat-containing pr 100.0 1.4E-36 4.9E-41 274.6 28.0 247 85-337 62-356 (357)
100 3k26_A Polycomb protein EED; W 100.0 6.6E-37 2.3E-41 277.6 25.6 242 86-333 67-365 (366)
101 4e54_B DNA damage-binding prot 100.0 5.3E-37 1.8E-41 286.0 24.4 254 80-338 156-434 (435)
102 3odt_A Protein DOA1; ubiquitin 100.0 2.1E-35 7.3E-40 262.0 33.3 266 52-340 32-302 (313)
103 3zwl_B Eukaryotic translation 100.0 2.4E-35 8.3E-40 267.4 34.1 239 123-367 25-281 (369)
104 2xyi_A Probable histone-bindin 100.0 1.1E-35 3.9E-40 276.5 30.8 259 82-373 122-407 (430)
105 1l0q_A Surface layer protein; 100.0 1.8E-34 6E-39 264.7 37.8 262 101-373 3-272 (391)
106 1p22_A F-BOX/WD-repeat protein 100.0 3E-35 1E-39 274.1 32.2 259 78-355 163-434 (435)
107 2aq5_A Coronin-1A; WD40 repeat 100.0 3.1E-35 1.1E-39 271.1 29.9 252 81-337 74-345 (402)
108 4a11_B DNA excision repair pro 100.0 1.5E-34 5.1E-39 265.9 31.9 281 85-373 96-402 (408)
109 3dw8_B Serine/threonine-protei 100.0 1.4E-35 4.8E-40 276.6 25.2 242 129-373 27-370 (447)
110 3jro_A Fusion protein of prote 100.0 1.9E-35 6.6E-40 293.3 27.2 245 124-373 3-282 (753)
111 2w18_A PALB2, fancn, partner a 100.0 3.7E-35 1.3E-39 257.0 25.4 276 91-373 42-354 (356)
112 1l0q_A Surface layer protein; 100.0 4.9E-33 1.7E-37 255.1 38.7 300 54-373 7-339 (391)
113 4ggc_A P55CDC, cell division c 100.0 2E-33 6.7E-38 250.0 33.4 263 56-336 42-317 (318)
114 4h5i_A Guanine nucleotide-exch 100.0 1.6E-34 5.5E-39 262.9 26.3 243 82-334 67-343 (365)
115 2pm7_B Protein transport prote 100.0 6.1E-34 2.1E-38 251.8 29.0 229 51-287 23-284 (297)
116 1yfq_A Cell cycle arrest prote 100.0 2.1E-34 7.3E-39 259.0 26.5 237 126-373 7-279 (342)
117 2j04_A TAU60, YPL007P, hypothe 100.0 1.5E-35 5.2E-40 275.4 18.5 245 86-365 83-350 (588)
118 3mmy_A MRNA export factor; mRN 100.0 3.2E-33 1.1E-37 253.3 32.6 252 115-373 24-301 (368)
119 3vu4_A KMHSV2; beta-propeller 100.0 1.1E-33 3.6E-38 256.6 29.0 244 114-373 3-268 (355)
120 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-33 5E-38 254.4 20.7 225 138-373 44-289 (343)
121 2vdu_B TRNA (guanine-N(7)-)-me 100.0 3.7E-32 1.3E-36 254.3 29.2 235 131-373 5-336 (450)
122 3f3f_A Nucleoporin SEH1; struc 100.0 3E-32 1E-36 244.5 25.3 281 51-341 25-344 (351)
123 1nir_A Nitrite reductase; hemo 100.0 4.1E-30 1.4E-34 245.1 36.2 287 79-373 170-511 (543)
124 3bws_A Protein LP49; two-domai 100.0 8.5E-30 2.9E-34 236.7 33.6 277 87-373 59-387 (433)
125 2w18_A PALB2, fancn, partner a 100.0 5.2E-31 1.8E-35 230.8 23.5 199 87-286 110-355 (356)
126 4gq1_A NUP37; propeller, trans 100.0 4.8E-31 1.6E-35 242.4 18.7 230 51-286 103-387 (393)
127 2xyi_A Probable histone-bindin 100.0 2E-29 6.9E-34 234.4 28.6 210 79-289 172-411 (430)
128 1nir_A Nitrite reductase; hemo 100.0 5.7E-29 1.9E-33 237.2 30.7 274 95-373 144-455 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.2E-29 1.1E-33 231.8 27.8 274 89-373 63-384 (415)
130 3u4y_A Uncharacterized protein 100.0 1.5E-27 5.1E-32 213.5 33.1 272 95-373 4-301 (331)
131 2ecf_A Dipeptidyl peptidase IV 100.0 1.9E-28 6.4E-33 243.1 29.4 281 88-373 36-410 (741)
132 2hqs_A Protein TOLB; TOLB, PAL 100.0 3.4E-28 1.2E-32 224.9 27.7 265 82-358 111-410 (415)
133 3vgz_A Uncharacterized protein 100.0 2.6E-26 8.8E-31 207.1 35.7 271 87-366 39-334 (353)
134 1ri6_A Putative isomerase YBHE 100.0 7.7E-27 2.6E-31 209.4 30.3 268 102-372 7-304 (343)
135 2ojh_A Uncharacterized protein 100.0 3.4E-27 1.1E-31 206.9 24.0 253 105-367 17-293 (297)
136 1pby_B Quinohemoprotein amine 100.0 3.3E-26 1.1E-30 204.8 27.3 262 101-373 2-307 (337)
137 1xfd_A DIP, dipeptidyl aminope 100.0 2E-27 7E-32 234.9 20.6 279 91-373 19-390 (723)
138 3o4h_A Acylamino-acid-releasin 99.9 9.1E-26 3.1E-30 217.8 28.6 271 88-372 21-311 (582)
139 1k32_A Tricorn protease; prote 99.9 2.9E-25 9.7E-30 228.0 29.2 282 81-373 45-458 (1045)
140 2z3z_A Dipeptidyl aminopeptida 99.9 4.3E-25 1.5E-29 217.8 29.2 275 89-373 82-432 (706)
141 2ecf_A Dipeptidyl peptidase IV 99.9 2.5E-25 8.4E-30 220.7 27.1 267 90-365 110-444 (741)
142 3hfq_A Uncharacterized protein 99.9 7.3E-24 2.5E-28 191.0 33.6 263 108-372 14-313 (347)
143 2z3z_A Dipeptidyl aminopeptida 99.9 5.5E-25 1.9E-29 217.0 28.5 266 92-366 29-376 (706)
144 1k32_A Tricorn protease; prote 99.9 4E-25 1.4E-29 226.9 27.7 278 82-373 197-499 (1045)
145 1xfd_A DIP, dipeptidyl aminope 99.9 5.9E-25 2E-29 217.3 26.2 279 80-363 49-427 (723)
146 1jmx_B Amine dehydrogenase; ox 99.9 4.5E-24 1.5E-28 191.9 28.7 260 94-373 5-322 (349)
147 3u4y_A Uncharacterized protein 99.9 2.1E-23 7.1E-28 186.5 32.8 271 81-357 33-326 (331)
148 1ri6_A Putative isomerase YBHE 99.9 1.1E-23 3.7E-28 188.8 30.1 264 86-358 35-335 (343)
149 3pe7_A Oligogalacturonate lyas 99.9 1.1E-23 3.7E-28 192.6 26.5 290 80-372 22-378 (388)
150 1pby_B Quinohemoprotein amine 99.9 1.9E-23 6.4E-28 186.8 25.6 245 90-346 35-322 (337)
151 3vgz_A Uncharacterized protein 99.9 1.1E-22 3.7E-27 183.3 29.5 239 131-373 41-300 (353)
152 2oit_A Nucleoporin 214KDA; NH2 99.9 1E-22 3.4E-27 189.1 28.7 200 88-289 36-279 (434)
153 2ojh_A Uncharacterized protein 99.9 5.8E-23 2E-27 179.8 25.0 234 83-325 36-293 (297)
154 3scy_A Hypothetical bacterial 99.9 1.2E-21 4E-26 177.6 34.0 261 107-372 24-333 (361)
155 3hfq_A Uncharacterized protein 99.9 7.3E-22 2.5E-26 177.9 30.2 247 86-338 37-323 (347)
156 1z68_A Fibroblast activation p 99.9 2.3E-23 8E-28 205.8 20.8 271 93-372 20-387 (719)
157 3o4h_A Acylamino-acid-releasin 99.9 7.5E-23 2.6E-27 197.4 19.7 231 130-373 21-273 (582)
158 3scy_A Hypothetical bacterial 99.9 5.6E-21 1.9E-25 173.0 30.9 260 87-354 48-360 (361)
159 1jof_A Carboxy-CIS,CIS-muconat 99.9 3.3E-21 1.1E-25 175.0 27.1 268 103-373 5-338 (365)
160 3c5m_A Oligogalacturonate lyas 99.9 8.2E-22 2.8E-26 180.3 20.0 272 91-372 38-378 (396)
161 2oiz_A Aromatic amine dehydrog 99.9 6.6E-20 2.3E-24 166.1 27.7 267 81-358 44-360 (361)
162 3azo_A Aminopeptidase; POP fam 99.9 3.6E-20 1.2E-24 181.3 26.5 286 83-372 18-363 (662)
163 3fvz_A Peptidyl-glycine alpha- 99.9 1.9E-19 6.4E-24 161.1 28.5 245 88-373 23-319 (329)
164 2oit_A Nucleoporin 214KDA; NH2 99.9 5.2E-21 1.8E-25 177.5 18.4 206 152-372 23-274 (434)
165 1jof_A Carboxy-CIS,CIS-muconat 99.9 6.7E-20 2.3E-24 166.4 25.2 242 88-335 39-342 (365)
166 2oiz_A Aromatic amine dehydrog 99.9 1.2E-19 4.2E-24 164.3 26.7 259 108-373 29-331 (361)
167 1jmx_B Amine dehydrogenase; ox 99.9 1.7E-19 5.9E-24 161.9 26.8 233 90-344 44-335 (349)
168 1z68_A Fibroblast activation p 99.9 2.3E-21 8E-26 191.5 15.3 231 135-372 20-340 (719)
169 4a5s_A Dipeptidyl peptidase 4 99.9 6.9E-20 2.4E-24 181.5 23.8 268 91-365 19-382 (740)
170 1q7f_A NHL, brain tumor CG1071 99.9 2.4E-18 8.2E-23 150.5 30.5 238 128-373 27-277 (286)
171 2dg1_A DRP35, lactonase; beta 99.8 6E-19 2.1E-23 157.8 26.1 270 89-366 6-300 (333)
172 1q7f_A NHL, brain tumor CG1071 99.8 8.9E-18 3E-22 146.9 30.1 241 86-335 27-281 (286)
173 2gop_A Trilobed protease; beta 99.8 1.1E-17 3.8E-22 150.3 30.9 254 90-372 16-327 (347)
174 3dsm_A Uncharacterized protein 99.8 5.2E-17 1.8E-21 145.1 29.7 254 108-373 15-299 (328)
175 2z2n_A Virginiamycin B lyase; 99.8 2E-15 6.8E-20 132.3 38.3 277 84-371 10-291 (299)
176 3pe7_A Oligogalacturonate lyas 99.8 1E-17 3.5E-22 152.9 23.8 254 114-373 14-326 (388)
177 1qks_A Cytochrome CD1 nitrite 99.8 8.1E-16 2.8E-20 146.5 37.1 278 90-373 198-535 (567)
178 3dsm_A Uncharacterized protein 99.8 1.6E-16 5.5E-21 141.9 29.9 254 90-353 45-319 (328)
179 4a5s_A Dipeptidyl peptidase 4 99.8 1.7E-18 5.9E-23 171.5 18.1 236 132-371 18-346 (740)
180 3e5z_A Putative gluconolactona 99.8 2.1E-16 7.2E-21 138.9 28.5 232 126-371 23-282 (296)
181 3azo_A Aminopeptidase; POP fam 99.8 2.2E-17 7.5E-22 161.5 23.4 254 81-344 60-379 (662)
182 3e5z_A Putative gluconolactona 99.8 2.6E-16 8.7E-21 138.3 27.6 242 82-337 21-289 (296)
183 2bkl_A Prolyl endopeptidase; m 99.8 2.5E-17 8.5E-22 162.0 21.8 243 86-337 118-400 (695)
184 2dg1_A DRP35, lactonase; beta 99.8 2.9E-15 9.9E-20 133.8 32.9 244 80-325 36-301 (333)
185 1qks_A Cytochrome CD1 nitrite 99.8 3.4E-15 1.2E-19 142.1 35.0 264 98-364 165-458 (567)
186 2xdw_A Prolyl endopeptidase; a 99.8 3.1E-16 1.1E-20 154.6 28.8 244 87-336 123-416 (710)
187 3no2_A Uncharacterized protein 99.8 1E-15 3.6E-20 133.0 28.1 238 99-344 4-262 (276)
188 2xdw_A Prolyl endopeptidase; a 99.7 1.1E-15 3.7E-20 150.8 29.0 239 129-373 123-411 (710)
189 3c5m_A Oligogalacturonate lyas 99.7 7.2E-17 2.5E-21 147.4 18.8 242 114-364 14-301 (396)
190 3no2_A Uncharacterized protein 99.7 2.3E-15 7.7E-20 130.8 26.6 213 141-364 4-231 (276)
191 2gop_A Trilobed protease; beta 99.7 2.6E-15 9E-20 134.7 27.4 235 89-347 59-342 (347)
192 1rwi_B Serine/threonine-protei 99.7 1.1E-15 3.8E-20 132.1 23.8 240 90-336 25-266 (270)
193 2mad_H Methylamine dehydrogena 99.7 4.8E-14 1.7E-18 127.8 34.8 269 96-373 28-347 (373)
194 2qc5_A Streptogramin B lactona 99.7 1.1E-13 3.6E-18 121.3 36.1 273 86-371 17-295 (300)
195 1rwi_B Serine/threonine-protei 99.7 1.3E-15 4.5E-20 131.7 23.4 234 132-373 25-261 (270)
196 2bkl_A Prolyl endopeptidase; m 99.7 3.6E-15 1.2E-19 146.6 23.6 236 128-373 118-394 (695)
197 3fvz_A Peptidyl-glycine alpha- 99.7 8.6E-15 2.9E-19 130.7 23.2 202 86-288 88-322 (329)
198 3sjl_D Methylamine dehydrogena 99.7 7.8E-14 2.7E-18 125.2 29.1 271 96-373 40-360 (386)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 1.6E-13 5.5E-18 121.1 30.7 239 88-334 17-299 (314)
200 3sjl_D Methylamine dehydrogena 99.7 8E-14 2.7E-18 125.2 26.0 263 81-356 72-384 (386)
201 2mad_H Methylamine dehydrogena 99.7 1.4E-12 4.7E-17 118.2 34.5 238 93-341 70-357 (373)
202 1yr2_A Prolyl oligopeptidase; 99.7 3E-14 1E-18 141.1 25.4 242 87-336 161-443 (741)
203 1yr2_A Prolyl oligopeptidase; 99.7 3.3E-14 1.1E-18 140.8 25.4 236 129-373 161-438 (741)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.3E-13 8E-18 120.1 27.9 238 130-372 17-295 (314)
205 2z2n_A Virginiamycin B lyase; 99.6 7.6E-13 2.6E-17 115.7 30.9 235 129-373 13-252 (299)
206 2qe8_A Uncharacterized protein 99.6 4.6E-14 1.6E-18 126.7 23.1 262 89-367 17-312 (343)
207 3c75_H MADH, methylamine dehyd 99.6 7E-14 2.4E-18 127.7 24.2 269 98-373 82-399 (426)
208 3hrp_A Uncharacterized protein 99.6 7.8E-13 2.7E-17 121.4 28.6 238 89-332 131-408 (409)
209 1xip_A Nucleoporin NUP159; bet 99.6 3.8E-14 1.3E-18 127.7 18.2 171 90-274 39-230 (388)
210 3hrp_A Uncharacterized protein 99.6 2.1E-12 7.3E-17 118.5 29.4 236 131-372 131-406 (409)
211 3c75_H MADH, methylamine dehyd 99.6 1.5E-12 5.2E-17 118.9 24.7 240 93-341 122-409 (426)
212 3dr2_A Exported gluconolactona 99.6 4.4E-12 1.5E-16 111.7 27.0 231 129-371 43-302 (305)
213 2qc5_A Streptogramin B lactona 99.5 3.5E-11 1.2E-15 105.1 32.0 234 130-373 19-257 (300)
214 3g4e_A Regucalcin; six bladed 99.5 1.3E-11 4.4E-16 108.4 29.2 223 134-364 16-260 (297)
215 3g4e_A Regucalcin; six bladed 99.5 1.2E-10 4.2E-15 102.0 32.0 223 90-322 14-260 (297)
216 1xip_A Nucleoporin NUP159; bet 99.5 3.6E-12 1.2E-16 114.8 20.5 171 174-363 39-231 (388)
217 2ghs_A AGR_C_1268P; regucalcin 99.5 1.9E-10 6.4E-15 102.3 31.4 220 134-364 52-290 (326)
218 3dr2_A Exported gluconolactona 99.5 4.4E-11 1.5E-15 105.3 26.7 232 82-326 38-299 (305)
219 3iuj_A Prolyl endopeptidase; h 99.5 8.8E-12 3E-16 122.4 24.3 241 86-337 126-408 (693)
220 1yiq_A Quinohemoprotein alcoho 99.5 2.3E-11 7.7E-16 119.0 25.7 259 99-365 120-538 (689)
221 1kb0_A Quinohemoprotein alcoho 99.5 1.3E-11 4.4E-16 120.5 23.4 268 100-373 77-504 (677)
222 1mda_H Methylamine dehydrogena 99.5 5.2E-12 1.8E-16 113.4 18.9 257 80-355 58-366 (368)
223 2ghs_A AGR_C_1268P; regucalcin 99.4 2.9E-10 9.8E-15 101.1 30.1 222 91-323 51-291 (326)
224 1mda_H Methylamine dehydrogena 99.4 1.3E-11 4.5E-16 110.9 19.8 247 111-373 47-343 (368)
225 1fwx_A Nitrous oxide reductase 99.4 6.2E-11 2.1E-15 110.9 24.7 217 141-364 100-406 (595)
226 1kb0_A Quinohemoprotein alcoho 99.4 7.9E-11 2.7E-15 114.9 26.0 256 99-362 127-537 (677)
227 1yiq_A Quinohemoprotein alcoho 99.4 3.4E-11 1.2E-15 117.7 23.0 271 100-373 70-502 (689)
228 2hz6_A Endoplasmic reticulum t 99.4 9.5E-14 3.2E-18 125.9 4.2 188 99-296 8-200 (369)
229 3q7m_A Lipoprotein YFGL, BAMB; 99.4 4.8E-10 1.7E-14 101.6 28.5 258 99-373 102-375 (376)
230 3iuj_A Prolyl endopeptidase; h 99.4 6.6E-11 2.3E-15 116.2 23.2 232 129-373 127-402 (693)
231 2hz6_A Endoplasmic reticulum t 99.4 2.6E-13 8.8E-18 123.0 5.5 202 141-358 8-216 (369)
232 3q7m_A Lipoprotein YFGL, BAMB; 99.4 3.4E-10 1.2E-14 102.6 25.7 259 99-373 52-334 (376)
233 2qe8_A Uncharacterized protein 99.3 3.1E-11 1.1E-15 108.2 15.8 223 131-373 17-275 (343)
234 1npe_A Nidogen, entactin; glyc 99.3 1.3E-08 4.4E-13 87.5 30.5 242 110-358 10-263 (267)
235 2ece_A 462AA long hypothetical 99.3 4.1E-09 1.4E-13 95.4 26.2 223 98-322 93-399 (462)
236 3hxj_A Pyrrolo-quinoline quino 99.3 6.1E-10 2.1E-14 98.7 20.9 261 88-372 59-320 (330)
237 1fwx_A Nitrous oxide reductase 99.3 7.9E-10 2.7E-14 103.5 22.1 236 98-337 99-434 (595)
238 3hxj_A Pyrrolo-quinoline quino 99.3 2.3E-10 7.8E-15 101.5 17.3 255 95-373 26-281 (330)
239 2ece_A 462AA long hypothetical 99.2 2.3E-08 8E-13 90.5 28.3 223 140-364 93-399 (462)
240 2iwa_A Glutamine cyclotransfer 99.2 4.7E-09 1.6E-13 89.3 22.2 199 133-335 23-238 (266)
241 2iwa_A Glutamine cyclotransfer 99.2 1.5E-08 5.2E-13 86.2 23.3 193 91-289 23-238 (266)
242 2fp8_A Strictosidine synthase; 99.1 6.4E-08 2.2E-12 85.6 27.1 239 91-334 21-313 (322)
243 3nol_A Glutamine cyclotransfer 99.1 2.7E-08 9.1E-13 83.7 22.4 194 164-365 33-244 (262)
244 1kv9_A Type II quinohemoprotei 99.1 1E-08 3.5E-13 99.9 23.1 268 100-373 66-485 (668)
245 1kv9_A Type II quinohemoprotei 99.1 1.6E-08 5.6E-13 98.5 24.3 257 100-364 117-520 (668)
246 3nol_A Glutamine cyclotransfer 99.1 1.9E-08 6.3E-13 84.7 21.1 186 86-278 38-245 (262)
247 3nok_A Glutaminyl cyclase; bet 99.1 2.4E-08 8.4E-13 84.0 20.7 184 86-277 50-254 (268)
248 2ad6_A Methanol dehydrogenase 99.1 7.6E-08 2.6E-12 92.0 25.6 268 100-373 62-491 (571)
249 1k3i_A Galactose oxidase precu 99.0 2.5E-08 8.7E-13 97.1 20.9 271 93-365 190-530 (656)
250 3mbr_X Glutamine cyclotransfer 99.0 4E-07 1.4E-11 75.9 24.7 185 86-277 16-223 (243)
251 3mbr_X Glutamine cyclotransfer 99.0 2.6E-07 8.9E-12 77.1 23.3 194 164-365 11-223 (243)
252 3nok_A Glutaminyl cyclase; bet 99.0 9.4E-08 3.2E-12 80.4 20.6 181 134-322 58-254 (268)
253 2ad6_A Methanol dehydrogenase 99.0 4.7E-07 1.6E-11 86.5 27.0 254 100-361 115-522 (571)
254 1w6s_A Methanol dehydrogenase 99.0 5.6E-07 1.9E-11 86.1 26.9 270 100-373 62-500 (599)
255 4a2l_A BT_4663, two-component 99.0 1E-05 3.4E-10 80.7 37.1 269 88-367 214-518 (795)
256 1npe_A Nidogen, entactin; glyc 98.9 2.9E-06 1E-10 72.6 28.4 204 89-296 36-246 (267)
257 2p4o_A Hypothetical protein; p 98.9 8.1E-06 2.8E-10 71.4 31.0 223 132-365 33-277 (306)
258 1flg_A Protein (quinoprotein e 98.9 1.7E-06 5.7E-11 82.8 28.5 259 100-364 117-548 (582)
259 2fp8_A Strictosidine synthase; 98.9 1.8E-06 6.1E-11 76.2 26.1 229 133-372 21-309 (322)
260 4a2l_A BT_4663, two-component 98.9 1.3E-05 4.3E-10 79.9 35.1 268 91-367 175-472 (795)
261 1w6s_A Methanol dehydrogenase 98.9 1E-06 3.6E-11 84.2 25.5 254 103-364 124-535 (599)
262 2p4o_A Hypothetical protein; p 98.8 1.3E-05 4.5E-10 70.1 29.9 232 81-325 25-279 (306)
263 1flg_A Protein (quinoprotein e 98.8 4.1E-06 1.4E-10 80.1 27.8 271 100-373 68-513 (582)
264 3v64_C Agrin; beta propeller, 98.8 1.6E-05 5.4E-10 71.0 28.8 244 90-342 35-283 (349)
265 1ijq_A LDL receptor, low-densi 98.7 7.3E-05 2.5E-09 65.7 31.2 228 110-342 10-246 (316)
266 3tc9_A Hypothetical hydrolase; 98.7 1.9E-05 6.3E-10 72.7 27.4 237 132-372 138-426 (430)
267 3v65_B Low-density lipoprotein 98.7 3E-05 1E-09 70.3 28.1 252 93-353 81-337 (386)
268 3v9f_A Two-component system se 98.7 0.00018 6.3E-09 71.4 35.2 274 89-372 258-564 (781)
269 3amr_A 3-phytase; beta-propell 98.6 2.4E-05 8.2E-10 68.6 23.5 194 99-296 39-272 (355)
270 3tc9_A Hypothetical hydrolase; 98.6 4.6E-05 1.6E-09 70.0 26.6 238 91-333 139-429 (430)
271 3v9f_A Two-component system se 98.6 0.00025 8.5E-09 70.4 33.6 269 89-368 211-517 (781)
272 4hw6_A Hypothetical protein, I 98.6 8.5E-05 2.9E-09 68.3 26.9 237 91-332 141-431 (433)
273 3p5b_L Low density lipoprotein 98.5 0.00051 1.8E-08 62.4 32.3 240 108-352 90-338 (400)
274 4hw6_A Hypothetical protein, I 98.5 0.00021 7.3E-09 65.6 28.5 237 132-372 140-429 (433)
275 1k3i_A Galactose oxidase precu 98.5 2.6E-05 8.8E-10 75.9 22.3 234 87-323 241-530 (656)
276 3sov_A LRP-6, low-density lipo 98.4 0.00029 1E-08 61.8 26.2 227 109-342 12-246 (318)
277 2xe4_A Oligopeptidase B; hydro 98.4 3.4E-05 1.2E-09 76.3 22.4 194 87-286 171-398 (751)
278 1ijq_A LDL receptor, low-densi 98.4 0.00067 2.3E-08 59.5 28.1 205 88-295 29-245 (316)
279 3qqz_A Putative uncharacterize 98.4 0.0004 1.4E-08 58.6 24.7 202 167-371 21-248 (255)
280 3v64_C Agrin; beta propeller, 98.4 0.00057 1.9E-08 60.9 26.6 200 89-291 73-278 (349)
281 3kya_A Putative phosphatase; s 98.4 0.00036 1.2E-08 64.6 25.8 247 91-340 141-481 (496)
282 2xbg_A YCF48-like protein; pho 98.4 0.0011 3.9E-08 58.3 33.1 271 88-372 35-318 (327)
283 3amr_A 3-phytase; beta-propell 98.4 0.00025 8.6E-09 62.2 23.4 194 141-342 39-272 (355)
284 3v65_B Low-density lipoprotein 98.4 0.00035 1.2E-08 63.2 25.4 204 89-294 116-324 (386)
285 3qqz_A Putative uncharacterize 98.3 0.00097 3.3E-08 56.2 27.0 199 83-285 21-250 (255)
286 3kya_A Putative phosphatase; s 98.3 0.00062 2.1E-08 63.0 26.3 238 132-372 140-471 (496)
287 3m0c_C LDL receptor, low-densi 98.3 0.0016 5.4E-08 64.3 30.2 229 108-342 402-640 (791)
288 3p5b_L Low density lipoprotein 98.3 0.0016 5.6E-08 59.0 28.3 208 87-295 110-327 (400)
289 2p9w_A MAL S 1 allergenic prot 98.2 0.00092 3.2E-08 58.1 24.0 195 93-290 17-267 (334)
290 1n7d_A LDL receptor, low-densi 98.1 2.1E-05 7.3E-10 76.8 13.1 240 108-353 384-633 (699)
291 4a0p_A LRP6, LRP-6, low-densit 98.1 0.0072 2.5E-07 58.1 31.2 226 108-342 13-245 (628)
292 3m0c_C LDL receptor, low-densi 98.1 0.0038 1.3E-07 61.6 28.5 202 87-290 422-634 (791)
293 3sov_A LRP-6, low-density lipo 98.1 0.0025 8.5E-08 55.9 24.7 214 150-370 11-232 (318)
294 3ei3_A DNA damage-binding prot 98.1 0.015 5.1E-07 59.9 33.1 275 88-373 553-910 (1158)
295 2ism_A Putative oxidoreductase 98.1 0.0055 1.9E-07 54.5 26.9 232 131-367 31-337 (352)
296 2xe4_A Oligopeptidase B; hydro 98.1 0.00026 8.8E-09 70.0 19.3 191 174-372 175-394 (751)
297 3s94_A LRP-6, low-density lipo 98.0 0.0081 2.8E-07 57.7 27.8 226 109-341 17-250 (619)
298 4a0p_A LRP6, LRP-6, low-densit 98.0 0.0085 2.9E-07 57.7 27.1 199 89-290 37-239 (628)
299 2p9w_A MAL S 1 allergenic prot 97.9 0.0048 1.6E-07 53.6 21.3 159 176-335 16-216 (334)
300 2vpj_A Kelch-like protein 12; 97.7 0.006 2.1E-07 52.7 20.5 227 99-336 14-280 (301)
301 3s94_A LRP-6, low-density lipo 97.7 0.037 1.3E-06 53.2 29.9 159 89-249 84-247 (619)
302 1n7d_A LDL receptor, low-densi 97.7 0.00022 7.4E-09 69.8 11.4 205 89-295 406-621 (699)
303 2ism_A Putative oxidoreductase 97.7 0.025 8.6E-07 50.2 26.2 219 90-321 32-332 (352)
304 2xbg_A YCF48-like protein; pho 97.7 0.025 8.5E-07 49.6 24.8 232 88-331 79-319 (327)
305 3ii7_A Kelch-like protein 7; p 97.6 0.021 7.3E-07 49.3 22.3 223 102-336 14-274 (306)
306 2xn4_A Kelch-like protein 2; s 97.6 0.017 5.7E-07 49.9 21.2 226 100-337 16-279 (302)
307 2g8s_A Glucose/sorbosone dehyd 97.6 0.034 1.2E-06 49.3 25.6 238 130-369 17-347 (353)
308 3sre_A PON1, serum paraoxonase 97.5 0.038 1.3E-06 48.9 22.0 175 150-333 81-297 (355)
309 3a9g_A Putative uncharacterize 97.4 0.061 2.1E-06 47.7 27.5 225 89-322 29-330 (354)
310 3sbq_A Nitrous-oxide reductase 97.4 0.095 3.3E-06 48.7 25.7 259 102-364 72-453 (638)
311 2vpj_A Kelch-like protein 12; 97.3 0.03 1E-06 48.2 19.5 205 152-367 31-264 (301)
312 2xzh_A Clathrin heavy chain 1; 97.3 0.063 2.1E-06 46.5 31.0 251 108-369 47-325 (365)
313 3a9g_A Putative uncharacterize 97.3 0.089 3.1E-06 46.6 28.3 228 131-364 29-330 (354)
314 1bpo_A Protein (clathrin); cla 97.3 0.1 3.4E-06 47.1 32.3 251 108-369 46-324 (494)
315 1zgk_A Kelch-like ECH-associat 97.3 0.049 1.7E-06 47.1 19.9 227 98-336 23-289 (308)
316 3sre_A PON1, serum paraoxonase 97.2 0.11 3.6E-06 46.1 24.3 192 84-278 45-287 (355)
317 2be1_A Serine/threonine-protei 97.1 0.019 6.5E-07 50.4 15.5 113 143-255 11-140 (339)
318 4asc_A Kelch repeat and BTB do 97.1 0.11 3.6E-06 45.1 20.5 224 103-337 8-280 (315)
319 2xn4_A Kelch-like protein 2; s 97.1 0.11 3.8E-06 44.6 20.5 204 152-367 30-262 (302)
320 3ii7_A Kelch-like protein 7; p 96.9 0.13 4.5E-06 44.2 19.1 212 144-366 14-257 (306)
321 1tl2_A L10, protein (tachylect 96.8 0.053 1.8E-06 44.1 14.5 145 216-369 42-203 (236)
322 1cru_A Protein (soluble quinop 96.7 0.14 4.7E-06 47.1 18.0 53 216-268 28-87 (454)
323 1zgk_A Kelch-like ECH-associat 96.6 0.16 5.5E-06 43.8 17.7 215 141-367 24-273 (308)
324 4asc_A Kelch repeat and BTB do 96.6 0.3 1E-05 42.2 19.6 204 152-366 13-253 (315)
325 3pbp_A Nucleoporin NUP82; beta 96.6 0.15 5.1E-06 45.9 16.9 143 97-241 29-208 (452)
326 2g8s_A Glucose/sorbosone dehyd 96.5 0.41 1.4E-05 42.3 27.8 226 89-320 18-339 (353)
327 2uvk_A YJHT; unknown function, 96.4 0.38 1.3E-05 42.3 18.8 231 99-340 19-348 (357)
328 1xi4_A Clathrin heavy chain; a 96.4 0.31 1.1E-05 50.6 19.5 252 108-369 46-324 (1630)
329 3pbp_A Nucleoporin NUP82; beta 96.3 0.56 1.9E-05 42.2 20.1 144 224-370 30-206 (452)
330 2be1_A Serine/threonine-protei 96.3 0.52 1.8E-05 41.3 18.7 187 101-291 11-234 (339)
331 2woz_A Kelch repeat and BTB do 96.2 0.5 1.7E-05 40.8 22.5 225 103-338 19-291 (318)
332 1tl2_A L10, protein (tachylect 96.2 0.12 4E-06 42.1 12.6 137 226-370 4-157 (236)
333 2uvk_A YJHT; unknown function, 96.0 0.19 6.5E-06 44.3 14.7 93 141-235 19-128 (357)
334 2woz_A Kelch repeat and BTB do 95.9 0.72 2.4E-05 39.8 18.9 203 153-366 25-263 (318)
335 1bpo_A Protein (clathrin); cla 95.8 1.1 3.7E-05 40.5 22.7 177 109-287 124-330 (494)
336 1cru_A Protein (soluble quinop 95.6 1.3 4.6E-05 40.5 31.3 103 131-233 27-162 (454)
337 3das_A Putative oxidoreductase 95.4 1.3 4.3E-05 39.0 28.2 144 87-231 30-218 (347)
338 3ei3_A DNA damage-binding prot 95.3 3.3 0.00011 42.8 32.1 239 88-333 374-635 (1158)
339 2zwa_A Leucine carboxyl methyl 95.2 2.3 7.8E-05 41.3 20.2 191 98-291 396-638 (695)
340 3das_A Putative oxidoreductase 95.2 1.5 5.2E-05 38.5 28.7 234 129-364 30-326 (347)
341 2zwa_A Leucine carboxyl methyl 95.1 2.6 9E-05 40.9 20.9 198 140-338 396-639 (695)
342 2xzh_A Clathrin heavy chain 1; 95.0 1.6 5.5E-05 37.8 22.7 192 90-285 108-329 (365)
343 3sbq_A Nitrous-oxide reductase 94.5 0.86 2.9E-05 42.5 13.7 123 211-335 319-479 (638)
344 3ott_A Two-component system se 94.2 4.5 0.00015 39.6 34.8 263 89-370 63-347 (758)
345 3qhy_B Beta-lactamase inhibito 92.2 4.8 0.00016 34.0 17.6 240 90-357 25-265 (282)
346 1xi4_A Clathrin heavy chain; a 91.9 5.1 0.00018 42.0 15.9 144 109-253 124-297 (1630)
347 3s25_A Hypothetical 7-bladed b 91.7 5.7 0.0002 34.0 17.2 163 94-275 58-240 (302)
348 3ott_A Two-component system se 89.9 15 0.00052 35.8 33.2 262 89-366 146-438 (758)
349 3qhy_B Beta-lactamase inhibito 89.9 8.2 0.00028 32.6 16.4 216 132-372 25-242 (282)
350 3s25_A Hypothetical 7-bladed b 86.3 15 0.00051 31.3 23.2 233 98-364 23-280 (302)
351 2wg3_C Hedgehog-interacting pr 85.4 18 0.00062 33.0 13.7 54 215-268 14-79 (463)
352 3b7f_A Glycosyl hydrolase, BNR 80.9 29 0.00099 30.6 26.1 69 88-157 54-143 (394)
353 3zwu_A Alkaline phosphatase PH 73.4 13 0.00046 35.0 8.7 58 218-275 479-548 (592)
354 4gq2_M Nucleoporin NUP120; bet 70.3 7.4 0.00025 39.3 6.6 37 217-253 238-274 (950)
355 4gq2_M Nucleoporin NUP120; bet 69.6 7.9 0.00027 39.1 6.6 37 132-168 237-273 (950)
356 4a9v_A PHOX; hydrolase, beta-p 69.5 26 0.0009 32.9 9.5 59 217-275 478-548 (592)
357 3f7f_A Nucleoporin NUP120; nuc 61.1 12 0.00041 36.2 5.7 36 90-127 223-258 (729)
358 4fhn_B Nucleoporin NUP120; pro 60.8 8 0.00027 40.0 4.8 37 217-253 240-276 (1139)
359 4fhn_B Nucleoporin NUP120; pro 59.0 8.3 0.00029 39.8 4.6 37 132-168 239-275 (1139)
360 1suu_A DNA gyrase subunit A; t 58.9 84 0.0029 26.7 25.6 190 98-289 6-232 (312)
361 3no0_A DNA gyrase subunit A; D 58.8 79 0.0027 26.4 19.3 157 172-334 67-246 (276)
362 3zwu_A Alkaline phosphatase PH 58.5 34 0.0012 32.3 8.2 55 309-363 481-548 (592)
363 4a9v_A PHOX; hydrolase, beta-p 58.4 31 0.0011 32.4 7.8 56 308-363 480-548 (592)
364 3f7f_A Nucleoporin NUP120; nuc 58.3 14 0.00046 35.8 5.5 32 223-254 228-259 (729)
365 3mez_B Mannose-specific lectin 57.7 46 0.0016 23.3 9.6 25 261-287 59-83 (113)
366 2wg3_C Hedgehog-interacting pr 57.6 1.1E+02 0.0038 27.7 26.4 52 90-141 15-79 (463)
367 3q6k_A 43.2 kDa salivary prote 51.7 1.3E+02 0.0043 26.6 23.4 167 196-363 124-341 (381)
368 3kci_A Probable E3 ubiquitin-p 48.2 1.4E+02 0.0048 26.1 26.0 225 142-372 62-341 (389)
369 3b7f_A Glycosyl hydrolase, BNR 46.3 1.5E+02 0.0051 25.8 26.5 63 216-279 178-254 (394)
370 3no0_A DNA gyrase subunit A; D 37.4 1.8E+02 0.0061 24.2 21.1 152 90-244 25-195 (276)
371 3q6k_A 43.2 kDa salivary prote 32.3 2.6E+02 0.0089 24.6 21.4 186 89-275 87-341 (381)
372 2oqq_A Transcription factor HY 29.8 22 0.00074 19.9 1.1 19 1-19 8-26 (42)
373 1suu_A DNA gyrase subunit A; t 28.4 2.7E+02 0.0092 23.5 22.5 151 91-244 49-230 (312)
374 3uc1_A DNA gyrase subunit A; D 28.4 2.8E+02 0.0095 23.7 24.2 261 101-367 4-321 (327)
375 3al9_A Plexin-A2; beta-propell 23.0 1.7E+02 0.0058 27.2 6.7 66 218-283 403-476 (539)
376 1q47_A Semaphorin 3A; beta pro 22.9 1.9E+02 0.0067 26.4 7.0 55 317-371 423-487 (495)
377 3a0c_A Mannose/sialic acid-bin 22.7 1.9E+02 0.0065 19.9 9.1 54 219-286 23-76 (110)
378 4hvt_A Ritya.17583.B, post-pro 22.2 5.3E+02 0.018 24.8 24.0 236 92-333 132-429 (711)
379 4gz8_A Semaphorin-3A; multi-do 21.4 2.3E+02 0.008 27.1 7.3 55 317-371 431-495 (667)
380 1q47_A Semaphorin 3A; beta pro 20.8 2.9E+02 0.0098 25.3 7.6 56 228-283 423-487 (495)
No 1
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.8e-52 Score=377.88 Aligned_cols=292 Identities=21% Similarity=0.327 Sum_probs=265.4
Q ss_pred cccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEE
Q 017314 77 PSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYV 156 (373)
Q Consensus 77 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~i 156 (373)
+..+..++.+|.+.|++++|+|++++|++|+.|++|++||+.++.....+..|...|.+++|+|++++|++++.|+.|++
T Consensus 44 ~~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~i 123 (340)
T 1got_B 44 QMRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSI 123 (340)
T ss_dssp CCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred cchhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEE
Confidence 34567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCC----eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEE
Q 017314 157 WDVNSG----RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFS 231 (373)
Q Consensus 157 wd~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~s 231 (373)
||+.++ +....+.+|...|.++.|++. ..+++++.|++|++||+.++.++.++..|. .+.+++|+|++.++++
T Consensus 124 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 201 (340)
T 1got_B 124 YNLKTREGNVRVSRELAGHTGYLSCCRFLDD--NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVS 201 (340)
T ss_dssp EETTTCSBSCEEEEEEECCSSCEEEEEEEET--TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EECccCCCcceeEEEecCCCccEEEEEECCC--CcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEE
Confidence 999875 456788999999999999873 469999999999999999999888887664 5899999999999999
Q ss_pred EeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEE
Q 017314 232 GHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCI 311 (373)
Q Consensus 232 g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (373)
|+.||+|++||+++++.+..+..|. ..|++++|+|++++|++++.|+.+++||++..+....+.... ....+..++|
T Consensus 202 g~~d~~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~--~~~~v~~~~~ 278 (340)
T 1got_B 202 GACDASAKLWDVREGMCRQTFTGHE-SDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN--IICGITSVSF 278 (340)
T ss_dssp EETTSCEEEEETTTCSEEEEECCCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTT--CCSCEEEEEE
T ss_pred EeCCCcEEEEECCCCeeEEEEcCCc-CCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCC--cccceEEEEE
Confidence 9999999999999999999888886 789999999999999999999999999999877665554222 1223455789
Q ss_pred CCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 312 SPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 312 s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+|+|.+|++|+.||.|++||+.+++.+..+.+|.++|.+++|+|+|++|+|||.||.|+||+
T Consensus 279 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 279 SKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999996
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.1e-53 Score=395.63 Aligned_cols=287 Identities=25% Similarity=0.451 Sum_probs=269.6
Q ss_pred eEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 017314 81 KHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 160 (373)
...+.+|.++|++++|+|++.+|++|+.|++|+|||+.+++....+.+|.+.|.+++|+|++++|++|+.|++|++||+.
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~ 180 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQ 180 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETT
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCc-eeEEEEccCCCEEEEEeCCCcEE
Q 017314 161 SGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSN-CNALAFSMDGQTIFSGHIDGNLR 239 (373)
Q Consensus 161 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~sg~~dg~i~ 239 (373)
+++++.++.+|...|.+++|+| +++++++|+.|++|++||++++.++.++..|.. +.++.++|+|.+|++|+.|++|+
T Consensus 181 ~~~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 181 GFECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp SSCEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCceeEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 9999999999999999999998 578999999999999999999999988877654 89999999999999999999999
Q ss_pred EEECCCCeeeEEEecccccceEEEEEcCC--------------------CCEEEEeeCCCeEEEEEccccceeeeeeecC
Q 017314 240 LWDIQTGKLLSEVAAHSLAAVTSISLSRS--------------------GNIILTSGRDNLHNLFDIRSLEVCGSLRATG 299 (373)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~ 299 (373)
+||+++++....+..|. ..|.+++|+|+ +.+|++++.|+.+++||+++......+..|.
T Consensus 260 vwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 260 VWVVATKECKAELREHR-HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp EEETTTCCEEEEECCCS-SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEECCCCceeeEecCCC-ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 99999999988888876 78999999996 6799999999999999999998888887776
Q ss_pred CeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 300 NRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 300 ~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
..+. .++|+|+|.+|++|+.||+|++||+.+++++..+.+|...|++++|+|++.+|++||.||+|+||+
T Consensus 339 ~~v~----~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~ 408 (410)
T 1vyh_C 339 NWVR----GVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408 (410)
T ss_dssp SCEE----EEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC
T ss_pred CcEE----EEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 5543 478999999999999999999999999999999999999999999999999999999999999996
No 3
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-51 Score=374.38 Aligned_cols=293 Identities=19% Similarity=0.297 Sum_probs=262.8
Q ss_pred cccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEE
Q 017314 77 PSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYV 156 (373)
Q Consensus 77 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~i 156 (373)
+......+.+|.+.|++++|+|++.+|+|||.|++|++||..+++....+..|...|.+++|+|++..+++++.|+.+++
T Consensus 53 ~~~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v 132 (354)
T 2pbi_B 53 VMKTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSV 132 (354)
T ss_dssp CCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEE
T ss_pred ccEEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEE
Confidence 34567889999999999999999999999999999999999999888888889999999999999999999999999999
Q ss_pred EEcCCC------eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEcc--CCC
Q 017314 157 WDVNSG------RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSM--DGQ 227 (373)
Q Consensus 157 wd~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~--~g~ 227 (373)
|++... .....+.+|...|.++.|++ ++..+++++.|++|++||++++.++.++..|. .+.+++++| +|.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~ 211 (354)
T 2pbi_B 133 YPLTFDKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN 211 (354)
T ss_dssp EECCCCTTCCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC
T ss_pred EEEeccccccccccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC
Confidence 998643 34567789999999999987 57789999999999999999999988887664 588888887 578
Q ss_pred EEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCee
Q 017314 228 TIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWS 307 (373)
Q Consensus 228 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
+|++|+.||+|++||+++++.+..+..|. ..|++++|+|++++|++++.|+.+++||++..+....+..+.. .....
T Consensus 212 ~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~--~~~~~ 288 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRSGQCVQAFETHE-SDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESI--IFGAS 288 (354)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTC--CSCEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCC-CCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCc--cccee
Confidence 99999999999999999999999888886 7899999999999999999999999999998766554433221 12334
Q ss_pred eeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 308 RSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 308 ~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
.++|+|+|.+|++|+.||.|++||+.+++.+..+.+|..+|++++|+|+|++|++||.||+|+||+
T Consensus 289 ~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 289 SVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 578999999999999999999999999999999999999999999999999999999999999996
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6.2e-52 Score=371.32 Aligned_cols=287 Identities=21% Similarity=0.407 Sum_probs=261.7
Q ss_pred eEEecCccCcEEEEEEcCC----CCEEEEeeCCCcEEEEeCCCCce--eeeccccccceEEEEEcCCCCEEEEEeCCCcE
Q 017314 81 KHKINAHEGGCASILFEYN----SARLISGGQDKSIKLWDTNTGSL--SSTLYGCLGSVLDLAITHDNRSVIAASSSNNL 154 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~~----~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 154 (373)
...+.+|.++|++++|+++ +.+|+|||.|++|+|||+.++.. ...+.+|...|.+++|++++..+++++.|++|
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i 104 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHI 104 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcE
Confidence 4567799999999999875 66899999999999999987654 44688999999999999999999999999999
Q ss_pred EEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEEe
Q 017314 155 YVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGH 233 (373)
Q Consensus 155 ~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~ 233 (373)
++||+.+++.+..+..|...+.+++|+| +++++++|+.|++|++||+.++.....+..+. .+.+++|+|+|++|++|+
T Consensus 105 ~lWd~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~ 183 (321)
T 3ow8_A 105 RLWDLENGKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGA 183 (321)
T ss_dssp EEEETTTTEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEc
Confidence 9999999999999999999999999998 67899999999999999999998877776554 489999999999999999
Q ss_pred CCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECC
Q 017314 234 IDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISP 313 (373)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 313 (373)
.||.|++||+++++.+..+..|. ..|.+++|+|++++|++++.|+.|++||++..+....+..+...+ ..++|+|
T Consensus 184 ~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v----~~~~~sp 258 (321)
T 3ow8_A 184 IDGIINIFDIATGKLLHTLEGHA-MPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWV----LNVAFCP 258 (321)
T ss_dssp TTSCEEEEETTTTEEEEEECCCS-SCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCE----EEEEECT
T ss_pred CCCeEEEEECCCCcEEEEEcccC-CceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCce----EEEEECC
Confidence 99999999999999999998886 789999999999999999999999999999988887777766544 3478999
Q ss_pred CCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 314 DESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 314 ~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
++.+|++|+.||+|++||+.+++++..+.+|...|++++|+|+|++|++++.||.|+||+
T Consensus 259 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd 318 (321)
T 3ow8_A 259 DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYD 318 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEE
T ss_pred CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 999999999999999999999999999999999999999999999999999999999996
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.4e-51 Score=362.53 Aligned_cols=287 Identities=18% Similarity=0.265 Sum_probs=258.3
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDV 159 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 159 (373)
...+|.+|.+.|++++|+|++++|++|+.|++|++||+.++..+..+.+|..+|.+++|+|++++|++|+.|++|++||+
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 46678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCe-eeeEEeecC-ceeEEEEcc-CCCEEEEEeCCC
Q 017314 160 NSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGY-CVNTIIFHS-NCNALAFSM-DGQTIFSGHIDG 236 (373)
Q Consensus 160 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~-~~~~~~~~~-~~~~~~~~~-~g~~l~sg~~dg 236 (373)
.+++.+..+.+|.+.|.+++|+| ++.+++||+.|++|++||++++. ....+..|. .+.+++|+| ++..|++|+.|+
T Consensus 85 ~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 85 NTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp TTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred CCCcEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 99999999999999999999998 57899999999999999998874 445555554 589999999 678999999999
Q ss_pred cEEEEECCCCeeeEEEecccccceEEEEEcC--CCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCC
Q 017314 237 NLRLWDIQTGKLLSEVAAHSLAAVTSISLSR--SGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPD 314 (373)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 314 (373)
+|++||++++.....+..++...+..+.|+| ++++|++++.|+.|++||+++.+....+..|...+. .++|+|+
T Consensus 164 ~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~----~~~~~p~ 239 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVS----FAVFHPT 239 (304)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE----EEEECSS
T ss_pred eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEE----EEEECCC
Confidence 9999999988777777665557889999986 778999999999999999999988888887766543 4779999
Q ss_pred CcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCC--cEEEEeCCCeEEE
Q 017314 315 ESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGK--PLASADKNGVVCV 371 (373)
Q Consensus 315 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~--~l~s~s~dg~i~i 371 (373)
+.+|++|+.||+|++||+.++++++.+..|...+++++|+|++. ++|+|+.||.+.+
T Consensus 240 ~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~ 298 (304)
T 2ynn_A 240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL 298 (304)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEE
Confidence 99999999999999999999999999999999999999999885 5888887776543
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.3e-52 Score=380.08 Aligned_cols=295 Identities=20% Similarity=0.344 Sum_probs=260.1
Q ss_pred ccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEE
Q 017314 78 STCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVW 157 (373)
Q Consensus 78 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iw 157 (373)
..+.+++.+|.+.|++++|+|++++|+|||.|++|+|||+.+++....+.+|...|.+++|+|++++|++++.|++|++|
T Consensus 56 ~~~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 56 LVCCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp CEEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred eEEeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCe-------eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe-----ec-CceeEEEEcc
Q 017314 158 DVNSGR-------VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII-----FH-SNCNALAFSM 224 (373)
Q Consensus 158 d~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~-----~~-~~~~~~~~~~ 224 (373)
|+.+.. ....+.+|...|.++.|.|.....++||+.|++|++||+.++.++..+. .| ..+.+++++|
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 986532 3457889999999999988767789999999999999999998877662 22 3588999977
Q ss_pred -CCCEEEEEeCCCcEEEEECC-CCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCee
Q 017314 225 -DGQTIFSGHIDGNLRLWDIQ-TGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRV 302 (373)
Q Consensus 225 -~g~~l~sg~~dg~i~iwd~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 302 (373)
++.+|++|+.||+|++||++ .++.+..+.+|. ..|++++|+|++++|++++.|+.+++||+++......+..+....
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGHE-GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCCS-SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCcC-CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 88999999999999999998 456777788876 789999999999999999999999999999987776665432211
Q ss_pred ---ecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEe----ccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 303 ---ASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTL----KEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 303 ---~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l----~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
......++|+|+|.+|++|+.||.|++||+..++.+..+ .+|.+.|++++|+|+|++|+|||.||+|+||+
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEe
Confidence 112345789999999999999999999999999888777 67999999999999999999999999999995
No 7
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1e-49 Score=355.41 Aligned_cols=292 Identities=28% Similarity=0.509 Sum_probs=264.9
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDV 159 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 159 (373)
....+.+|.++|++++|+|++++|++|+.|+.|++||+.+++....+.+|...|.+++|+|++++|++++.|++|++||+
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEEeCCCcE
Q 017314 160 NSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGHIDGNL 238 (373)
Q Consensus 160 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~~dg~i 238 (373)
.+++++..+.+|...|.++.|+| +++++++|+.|++|++||++++.++..+..|. .+.+++|+|++.++++|+.||.|
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i 173 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLC 173 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcE
Confidence 99999999999999999999998 67899999999999999999998888877664 58999999999999999999999
Q ss_pred EEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEE
Q 017314 239 RLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYV 318 (373)
Q Consensus 239 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 318 (373)
++||+++++.+..+..+....+..++|+|++++|++++.|+.+++||+++.+....+..+........ .....+++.+|
T Consensus 174 ~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l 252 (312)
T 4ery_A 174 RIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIF-ANFSVTGGKWI 252 (312)
T ss_dssp EEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCC-EEEECSSSCEE
T ss_pred EEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEE-EEEEeCCCcEE
Confidence 99999999888877666557899999999999999999999999999999888777766544332211 12234688999
Q ss_pred EEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEe--CCCeEEEcC
Q 017314 319 AAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASAD--KNGVVCVWT 373 (373)
Q Consensus 319 ~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s--~dg~i~iW~ 373 (373)
++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++ .||.|++|+
T Consensus 253 ~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 253 VSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWK 309 (312)
T ss_dssp EECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEE
T ss_pred EEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEec
Confidence 9999999999999999999999999999999999999999999997 699999994
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.3e-49 Score=352.05 Aligned_cols=285 Identities=24% Similarity=0.445 Sum_probs=251.2
Q ss_pred ceEEecCccCcEEEEEEcCCC-CEEEEeeCCCcEEEEeCCC-----CceeeeccccccceEEEEEcCCCCEEEEEeCCCc
Q 017314 80 CKHKINAHEGGCASILFEYNS-ARLISGGQDKSIKLWDTNT-----GSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNN 153 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~v~iwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~ 153 (373)
...+|.+|.+.|++++|+|++ ++|+|||.|++|++||+.. +..+..+.+|...|.+++|+|++++|++++.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 456889999999999999965 7999999999999999864 2346678899999999999999999999999999
Q ss_pred EEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccC------C
Q 017314 154 LYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMD------G 226 (373)
Q Consensus 154 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~------g 226 (373)
|++||+.+++....+.+|...|.++++++ ++.++++|+.|++|++||++. .++..+..|. .+.++.++|. +
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIKG-QCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECCC------C
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC-CeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 99999999999999999999999999988 678999999999999999974 4555655554 5889999985 4
Q ss_pred CEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCe
Q 017314 227 QTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNW 306 (373)
Q Consensus 227 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 306 (373)
..+++|+.|+.|++||+++++....+..|. ..|.+++|+|++++|++++.|+.|++||+++.+....+..+. ..
T Consensus 167 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~-~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~v 240 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQFQIEADFIGHN-SNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQD-----EV 240 (319)
T ss_dssp CEEEEEETTSCEEEEETTTTEEEEEECCCC-SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCS-----CE
T ss_pred cEEEEEeCCCEEEEEECCcchhheeecCCC-CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-----cE
Confidence 589999999999999999999888888886 789999999999999999999999999999988777776433 23
Q ss_pred eeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEec--------cCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 307 SRSCISPDESYVAAGSADGSVYIWSISKADIVRTLK--------EHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 307 ~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~--------~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
..++|+|++.+|++++.++ +++|++..+..+..+. .|...|.+++|||||++|++|+.||.|+||+
T Consensus 241 ~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 241 FSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQ 314 (319)
T ss_dssp EEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEE
Confidence 4578999999999988665 9999999888777664 3466799999999999999999999999995
No 9
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.4e-48 Score=357.82 Aligned_cols=281 Identities=21% Similarity=0.425 Sum_probs=246.7
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecccccc------------------ceEEEEEcCCCCEEEE
Q 017314 86 AHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLG------------------SVLDLAITHDNRSVIA 147 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~------------------~v~~~~~~~~~~~l~s 147 (373)
+|.+.|.+++|+|||++|++|+ |+++++|++.+++....+..+.. .|.+++|+|++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999977 78999999999988777665432 3899999999999999
Q ss_pred EeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCceeEEEEcc-CC
Q 017314 148 ASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSM-DG 226 (373)
Q Consensus 148 ~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~-~g 226 (373)
|+.|++|++||+.+++....+.+|...|.+++|+| ++.++++|+.|++|++||++++.+...+..+..+.+++++| ++
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 219 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDG 219 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTC
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCC
Confidence 99999999999999999999999999999999998 57899999999999999999999888888788899999999 89
Q ss_pred CEEEEEeCCCcEEEEECCCCeeeEEE-------ecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce--------
Q 017314 227 QTIFSGHIDGNLRLWDIQTGKLLSEV-------AAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV-------- 291 (373)
Q Consensus 227 ~~l~sg~~dg~i~iwd~~~~~~~~~~-------~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~-------- 291 (373)
.+|++|+.||.|++||+++++.+..+ ..|. ..|.+++|+|++++|++++.|+.+++||++....
T Consensus 220 ~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~-~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 220 KYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHK-DSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp CEEEEEETTSCEEEEETTTCCEEEEEC------CCCS-SCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred CEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCC-CCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence 99999999999999999999887766 3444 7899999999999999999999999999976432
Q ss_pred ----eeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcC------CCCcEE
Q 017314 292 ----CGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSG------LGKPLA 361 (373)
Q Consensus 292 ----~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~------~g~~l~ 361 (373)
...+..|... ...++++|++.+|++|+.||.|++||+.+++++..+.+|...|.+++|+| ++++||
T Consensus 299 ~~~~~~~~~~h~~~----v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~ 374 (393)
T 1erj_A 299 SGTCEVTYIGHKDF----VLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFA 374 (393)
T ss_dssp --CEEEEEECCSSC----EEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEE
T ss_pred CCcceEEEecccCc----EEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEE
Confidence 2233333332 23477899999999999999999999999999999999999999999986 688999
Q ss_pred EEeCCCeEEEcC
Q 017314 362 SADKNGVVCVWT 373 (373)
Q Consensus 362 s~s~dg~i~iW~ 373 (373)
|||.||+|+||+
T Consensus 375 sgs~Dg~i~iW~ 386 (393)
T 1erj_A 375 TGSGDCKARIWK 386 (393)
T ss_dssp EEETTSEEEEEE
T ss_pred EECCCCcEEECc
Confidence 999999999995
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2e-48 Score=352.15 Aligned_cols=290 Identities=18% Similarity=0.290 Sum_probs=242.3
Q ss_pred cceEEecCccC-cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCcee---eeccccccceEEEEEcCCCCEEEEEeCCCcE
Q 017314 79 TCKHKINAHEG-GCASILFEYNSARLISGGQDKSIKLWDTNTGSLS---STLYGCLGSVLDLAITHDNRSVIAASSSNNL 154 (373)
Q Consensus 79 ~~~~~~~~h~~-~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 154 (373)
.+..++.+|.+ .|++++|+|+|++|++|+.|++|+|||+.++... ....+|...|.+++|+|++++|++++.|++|
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v 85 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATT 85 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcE
Confidence 35678899988 9999999999999999999999999999887533 2236899999999999999999999999999
Q ss_pred EEEEcCCC--eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCe---eeeEEeec-CceeEEEEccCCCE
Q 017314 155 YVWDVNSG--RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGY---CVNTIIFH-SNCNALAFSMDGQT 228 (373)
Q Consensus 155 ~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~---~~~~~~~~-~~~~~~~~~~~g~~ 228 (373)
++||+.++ +++..+.+|...|.+++|+| ++++|++|+.|++|++||+..+. ++..+..| ..+.+++|+|++.+
T Consensus 86 ~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 164 (345)
T 3fm0_A 86 CIWKKNQDDFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQEL 164 (345)
T ss_dssp EEEEECCC-EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSC
T ss_pred EEEEccCCCeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCE
Confidence 99999876 46788999999999999998 67899999999999999998763 33444444 45899999999999
Q ss_pred EEEEeCCCcEEEEECCCCee--eEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce---------------
Q 017314 229 IFSGHIDGNLRLWDIQTGKL--LSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV--------------- 291 (373)
Q Consensus 229 l~sg~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~--------------- 291 (373)
|++|+.|++|++||.++++. ...+..|. ..|.+++|+|++++|++++.|+.+++||......
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~-~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHE-STVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCS-SCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCC-CceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccce
Confidence 99999999999999988753 45667776 7899999999999999999999999999743211
Q ss_pred eeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCce---------EEEEeccCCccEEEEEEcCCCC-cEE
Q 017314 292 CGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKAD---------IVRTLKEHTAPVLSCSWSGLGK-PLA 361 (373)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~---------~~~~l~~h~~~V~~~~~s~~g~-~l~ 361 (373)
...+.. .....+..++++|++.+|++++.|+.|++|+...+. ....+.+|...|++++|+|++. +||
T Consensus 244 ~~~~~~---~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~la 320 (345)
T 3fm0_A 244 ICTLSG---FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLA 320 (345)
T ss_dssp EEEECS---SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEE
T ss_pred eEEecC---CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEE
Confidence 111111 011233457889999999999999999999986542 1234568999999999999984 899
Q ss_pred EEeCCCeEEEcC
Q 017314 362 SADKNGVVCVWT 373 (373)
Q Consensus 362 s~s~dg~i~iW~ 373 (373)
|||.||.|++|+
T Consensus 321 S~s~Dg~v~~W~ 332 (345)
T 3fm0_A 321 SCSDDGEVAFWK 332 (345)
T ss_dssp EEETTSCEEEEE
T ss_pred EcCCCCcEEEEE
Confidence 999999999995
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6e-48 Score=348.73 Aligned_cols=286 Identities=25% Similarity=0.415 Sum_probs=240.1
Q ss_pred cceEEecCccCcEEEEEE-----cC-CCCEEEEeeCCCcEEEEeCCCC-------ceeeeccccccceEEEEEcCCCCEE
Q 017314 79 TCKHKINAHEGGCASILF-----EY-NSARLISGGQDKSIKLWDTNTG-------SLSSTLYGCLGSVLDLAITHDNRSV 145 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~-----~~-~~~~l~s~s~D~~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~l 145 (373)
.+...+.+|.+.|++++| ++ ++++|+|||.|++|++||+.++ .....+.+|...|.+++|+|++.++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 356789999999999999 76 8999999999999999998753 3456788999999999999999999
Q ss_pred EEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE---eecCceeEEEE
Q 017314 146 IAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI---IFHSNCNALAF 222 (373)
Q Consensus 146 ~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~---~~~~~~~~~~~ 222 (373)
++++.|++|++||+.+++.+..+.+|...|.+++|+| ++.++++|+.|++|++||+......... .+...+.+++|
T Consensus 92 ~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~ 170 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRY 170 (343)
T ss_dssp EEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeee
Confidence 9999999999999999999999999999999999998 6789999999999999999744322211 12235889999
Q ss_pred ccCC----------CEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccc-e
Q 017314 223 SMDG----------QTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLE-V 291 (373)
Q Consensus 223 ~~~g----------~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~-~ 291 (373)
+|++ .++++|+.||+|++||. ..+....+..|. ..|.+++|+|++++|++++.|+.+++||++... .
T Consensus 171 ~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~-~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~ 248 (343)
T 2xzm_R 171 SPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHE-SNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYP 248 (343)
T ss_dssp CCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCS-SCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSC
T ss_pred ccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcc-ccceEEEECCCCCEEEEEcCCCeEEEEECCCCccc
Confidence 9987 78999999999999994 556667777776 789999999999999999999999999995433 2
Q ss_pred eeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEE--Eec-----------cCCccEEEEEEcCCCC
Q 017314 292 CGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVR--TLK-----------EHTAPVLSCSWSGLGK 358 (373)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~--~l~-----------~h~~~V~~~~~s~~g~ 358 (373)
...+. +.. .+..++|+|++.++++| .|+.|++|++.+++... .+. +|...|.+++|+|+|+
T Consensus 249 ~~~~~-~~~----~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 322 (343)
T 2xzm_R 249 QREFD-AGS----TINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK 322 (343)
T ss_dssp SEEEE-CSS----CEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC
T ss_pred ceeec-CCC----cEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCC
Confidence 22221 222 24457899999988755 57789999998765433 443 6888999999999999
Q ss_pred cEEEEeCCCeEEEcC
Q 017314 359 PLASADKNGVVCVWT 373 (373)
Q Consensus 359 ~l~s~s~dg~i~iW~ 373 (373)
+|++|+.||.|++|+
T Consensus 323 ~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 323 KLFAGFTDGVIRTFS 337 (343)
T ss_dssp CEEEEETTSEEEEEE
T ss_pred eEEEecCCceEEEEE
Confidence 999999999999995
No 12
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2e-48 Score=378.17 Aligned_cols=305 Identities=21% Similarity=0.354 Sum_probs=252.8
Q ss_pred HhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecc----
Q 017314 52 LAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLY---- 127 (373)
Q Consensus 52 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~---- 127 (373)
+++.+.|+.++.|+.. +..+...+.+|.+.|++++|+||+++|+||+.|++|++||+.+++....+.
T Consensus 163 l~s~s~D~~v~lwd~~---------~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~ 233 (611)
T 1nr0_A 163 IISGSDDNTVAIFEGP---------PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL 233 (611)
T ss_dssp EEEEETTSCEEEEETT---------TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS
T ss_pred EEEEeCCCeEEEEECC---------CCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc
Confidence 5555666666666522 234677899999999999999999999999999999999999998877773
Q ss_pred ---ccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEE--------------------------------------
Q 017314 128 ---GCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRH-------------------------------------- 166 (373)
Q Consensus 128 ---~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~-------------------------------------- 166 (373)
+|.+.|.+++|+|++++|++++.|++|++||+.++++..
T Consensus 234 ~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~ 313 (611)
T 1nr0_A 234 KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPEL 313 (611)
T ss_dssp SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTT
T ss_pred cccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCC
Confidence 799999999999999999999999999999998876543
Q ss_pred -----EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE------------------------------
Q 017314 167 -----TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI------------------------------ 211 (373)
Q Consensus 167 -----~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~------------------------------ 211 (373)
.+.+|...|.+++|+| ++.++++++.|++|++||+.++.+...+
T Consensus 314 ~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~ 392 (611)
T 1nr0_A 314 GSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKV 392 (611)
T ss_dssp TEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEE
T ss_pred CCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEE
Confidence 3458999999999998 6889999999999999998765432211
Q ss_pred -----------------------------------------------------eecCceeEEEEccCCCEEEEEeCCCcE
Q 017314 212 -----------------------------------------------------IFHSNCNALAFSMDGQTIFSGHIDGNL 238 (373)
Q Consensus 212 -----------------------------------------------------~~~~~~~~~~~~~~g~~l~sg~~dg~i 238 (373)
.....+.+++|+|||++|++|+.|++|
T Consensus 393 w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v 472 (611)
T 1nr0_A 393 VPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKV 472 (611)
T ss_dssp ECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred eecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeE
Confidence 001235689999999999999999999
Q ss_pred EEEECCCCeee--EEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccc-cceeee--eeecCCeeecCeeeeEECC
Q 017314 239 RLWDIQTGKLL--SEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRS-LEVCGS--LRATGNRVASNWSRSCISP 313 (373)
Q Consensus 239 ~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~-~~~~~~--~~~~~~~~~~~~~~~~~s~ 313 (373)
++||+.++... .. ..|. ..|++++|+|++++|++++.|+.+++||+.+ .+.... +..|.. .+..++|+|
T Consensus 473 ~lwd~~~~~~~~~~~-~~h~-~~v~~v~fspdg~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~----~V~~v~fsp 546 (611)
T 1nr0_A 473 HVYKLSGASVSEVKT-IVHP-AEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTA----KVACVSWSP 546 (611)
T ss_dssp EEEEEETTEEEEEEE-EECS-SCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSS----CEEEEEECT
T ss_pred EEEEccCCceeeeec-cCCC-CceEEEEECCCCCEEEEEcCCCCEEEEEcCCCCceeeeeeeeeccc----ceeEEEECC
Confidence 99999876542 23 4454 7899999999999999999999999999987 444332 122333 344588999
Q ss_pred CCcEEEEEeCCCcEEEEEccCce-EE-EEeccC-CccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 314 DESYVAAGSADGSVYIWSISKAD-IV-RTLKEH-TAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 314 ~~~~l~sgs~Dg~i~iwd~~~~~-~~-~~l~~h-~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
||++|++|+.|++|++|++.++. .. ..+.+| ...|++++|+|+++ |++++.||+|++|+
T Consensus 547 dg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l~s~~~D~~i~lW~ 608 (611)
T 1nr0_A 547 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-IVSAGQDSNIKFWN 608 (611)
T ss_dssp TSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-EEEEETTSCEEEEE
T ss_pred CCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-EEEecCCCCEEEEe
Confidence 99999999999999999998764 33 677889 89999999999998 99999999999995
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.4e-48 Score=350.97 Aligned_cols=280 Identities=21% Similarity=0.273 Sum_probs=233.9
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC-----------ceeeeccccccceEEEEEcCCCCEEEEEeCCCcE
Q 017314 86 AHEGGCASILFEYNSARLISGGQDKSIKLWDTNTG-----------SLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNL 154 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 154 (373)
.|...|.+++|+|||++|++++ |+++|+||.... ........+...|.+++|+|++ .|++|+.|++|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCEE
Confidence 4778899999999999999888 778888874211 1111223355689999999985 78899999999
Q ss_pred EEEEcCCCeeEE----EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCC-E
Q 017314 155 YVWDVNSGRVRH----TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQ-T 228 (373)
Q Consensus 155 ~iwd~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~-~ 228 (373)
+|||+.+++... .+.+|.+.|.+++|+| ++++|++|+.|++|++||+.++.++.++..|. .+.+++|+|++. +
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 999999886543 4558999999999998 68899999999999999999999999888765 589999999885 7
Q ss_pred EEEEeCCCcEEEEECCCCeeeEEEeccc-ccceEEEEEcCC-CCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCe
Q 017314 229 IFSGHIDGNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRS-GNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNW 306 (373)
Q Consensus 229 l~sg~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~-~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 306 (373)
|++|+.|++|++||+++++....+..+. ...+++++|+|+ +++|++++.|+.|++||+++.+.+..+..|...+.
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~--- 261 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVT--- 261 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEE---
T ss_pred eeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEE---
Confidence 8899999999999999998887765432 346899999985 56889999999999999999998888887766553
Q ss_pred eeeEECCCC-cEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCc-EEEEeCCCeEEEcC
Q 017314 307 SRSCISPDE-SYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKP-LASADKNGVVCVWT 373 (373)
Q Consensus 307 ~~~~~s~~~-~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~-l~s~s~dg~i~iW~ 373 (373)
.++|+|++ .+|++|+.||+|+|||+.+++++ .+.+|.+.|++++|||+++. |+|+|.||+|++|+
T Consensus 262 -~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~ 328 (344)
T 4gqb_B 262 -GLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHV 328 (344)
T ss_dssp -EEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred -EEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEE
Confidence 47899998 58999999999999999998765 46899999999999999875 67999999999994
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-47 Score=342.21 Aligned_cols=286 Identities=15% Similarity=0.244 Sum_probs=231.3
Q ss_pred cceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC--ceeeec-cc-cccceEEEEEcCCCCEEEEEeCCCcE
Q 017314 79 TCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTG--SLSSTL-YG-CLGSVLDLAITHDNRSVIAASSSNNL 154 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--~~~~~~-~~-~~~~v~~~~~~~~~~~l~s~s~d~~i 154 (373)
.+.+.+.+|.++|+++.|+++ +|++|+.|++|++||+.++ .....+ .+ |...|.+++|+|++++|++++.|++|
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v 82 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTV 82 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ccceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcE
Confidence 356788999999999999987 9999999999999999875 344444 34 99999999999999999999999999
Q ss_pred EEEEcCC-------CeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCC----eeeeEEeec-CceeEEEE
Q 017314 155 YVWDVNS-------GRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKG----YCVNTIIFH-SNCNALAF 222 (373)
Q Consensus 155 ~iwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~----~~~~~~~~~-~~~~~~~~ 222 (373)
+|||+.. .++...+.+|...|.+++|+| ++++|++|+.|++|++||++.. .++..+..| ..+.+++|
T Consensus 83 ~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~ 161 (330)
T 2hes_X 83 SIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIW 161 (330)
T ss_dssp EEEEC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEE
T ss_pred EEEEcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEE
Confidence 9999853 356778999999999999998 5789999999999999999432 455556555 45899999
Q ss_pred ccCCCEEEEEeCCCcEEEEECCCC--eeeEEEecccccceEEEEEcCC--CCEEEEeeCCCeEEEEEccccc--------
Q 017314 223 SMDGQTIFSGHIDGNLRLWDIQTG--KLLSEVAAHSLAAVTSISLSRS--GNIILTSGRDNLHNLFDIRSLE-------- 290 (373)
Q Consensus 223 ~~~g~~l~sg~~dg~i~iwd~~~~--~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~i~~~d~~~~~-------- 290 (373)
+|++.+|++|+.|++|++||..++ +++..+.+|. ..|.+++|+|+ +.+|++++.|+++++||++...
T Consensus 162 ~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 162 HPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHE-GTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCS-SCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCC-CcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 999999999999999999999876 5677787776 78999999998 6799999999999999987542
Q ss_pred eeeeeee-cCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCce--EEE-EeccCCc-cEEEEEEcC--CCCcEEEE
Q 017314 291 VCGSLRA-TGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKAD--IVR-TLKEHTA-PVLSCSWSG--LGKPLASA 363 (373)
Q Consensus 291 ~~~~~~~-~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~--~~~-~l~~h~~-~V~~~~~s~--~g~~l~s~ 363 (373)
....+.. +.. ....+++++++ +|++|+.||.|+||+..+++ ... .+.+|.. .|.+++|+| ++++||||
T Consensus 241 ~~~~~~~~h~~----~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~ 315 (330)
T 2hes_X 241 CEAILPDVHKR----QVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATG 315 (330)
T ss_dssp EEEECCSCCSS----CEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEE
T ss_pred Eeeeccccccc----ceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEe
Confidence 2222222 222 23456788655 89999999999999998874 333 3467887 899999999 78999999
Q ss_pred eCCCeEEEcC
Q 017314 364 DKNGVVCVWT 373 (373)
Q Consensus 364 s~dg~i~iW~ 373 (373)
|.||+|+||+
T Consensus 316 s~Dg~v~~W~ 325 (330)
T 2hes_X 316 GDDGIVNFWS 325 (330)
T ss_dssp ETTSEEEEEE
T ss_pred cCCCcEEEEE
Confidence 9999999995
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.3e-48 Score=352.23 Aligned_cols=282 Identities=19% Similarity=0.248 Sum_probs=234.9
Q ss_pred cCccCcEEEEEEcCCCCEEEEeeC------CCcEEEEeCCCCceee----eccccccceEEEEEcCCCCEEEEEeCCCcE
Q 017314 85 NAHEGGCASILFEYNSARLISGGQ------DKSIKLWDTNTGSLSS----TLYGCLGSVLDLAITHDNRSVIAASSSNNL 154 (373)
Q Consensus 85 ~~h~~~v~~~~~~~~~~~l~s~s~------D~~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i 154 (373)
..|.+.|++++|+|||++|++||. |++|++|+..++.... ...+|...|.+++|+|++. +++++.|++|
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 469999999999999999999998 7789999988765433 3356888999999999975 6678899999
Q ss_pred EEEEcCCCeeE----EEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCC-E
Q 017314 155 YVWDVNSGRVR----HTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQ-T 228 (373)
Q Consensus 155 ~iwd~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~-~ 228 (373)
+|||+.+++.. ....+|.+.|.+++|+| +++++++|+.|++|++||++++.++..+..|. .+++++|+|++. +
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~ 196 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTI 196 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSC
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCce
Confidence 99999887643 34458999999999998 67899999999999999999999988887664 589999999875 7
Q ss_pred EEEEeCCCcEEEEECCCCeeeEEEecc-cccceEEEEEcCCC-CEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCe
Q 017314 229 IFSGHIDGNLRLWDIQTGKLLSEVAAH-SLAAVTSISLSRSG-NIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNW 306 (373)
Q Consensus 229 l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 306 (373)
+++++.||+|++||+++++.+..+..+ ....+++++|+|++ .+|++++.|+.|++||+++.+....+..+...+
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v---- 272 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNI---- 272 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCE----
T ss_pred eeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeE----
Confidence 889999999999999998877655432 23579999999974 688999999999999999988888877666554
Q ss_pred eeeEECCCC-cEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcC-CCCcEEEEeCCCeEEEcC
Q 017314 307 SRSCISPDE-SYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSG-LGKPLASADKNGVVCVWT 373 (373)
Q Consensus 307 ~~~~~s~~~-~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~-~g~~l~s~s~dg~i~iW~ 373 (373)
..++|+|++ .+|++|+.||+|+|||+.+++++..+ +|.++|++++||| ++++|+|+|.||+|++|+
T Consensus 273 ~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 273 TGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp EEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence 347899987 68999999999999999999888765 7999999999999 799999999999999995
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.7e-46 Score=362.29 Aligned_cols=288 Identities=20% Similarity=0.262 Sum_probs=250.7
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc--eeeeccccccceEEEEEcCCCCEEEEEeCC----Cc
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGS--LSSTLYGCLGSVLDLAITHDNRSVIAASSS----NN 153 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d----~~ 153 (373)
....+.+|...|++++|+|+|++||||+.|++|+|||+.++. ....+.+|.++|.+++|+||+++|++++.+ ++
T Consensus 51 ~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~ 130 (611)
T 1nr0_A 51 DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGH 130 (611)
T ss_dssp CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEE
T ss_pred cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeE
Confidence 456789999999999999999999999999999999997543 455778899999999999999999998876 36
Q ss_pred EEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEE
Q 017314 154 LYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSG 232 (373)
Q Consensus 154 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg 232 (373)
|++|| +++....+.+|...|.+++|+|.....+++|+.|++|++||..++++..++..|. .+.+++|+|+|++|++|
T Consensus 131 v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~ 208 (611)
T 1nr0_A 131 VFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFAST 208 (611)
T ss_dssp EEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEE
Confidence 77777 4666778899999999999998655579999999999999999988888887665 48999999999999999
Q ss_pred eCCCcEEEEECCCCeeeEEEe-------cccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecC
Q 017314 233 HIDGNLRLWDIQTGKLLSEVA-------AHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASN 305 (373)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~ 305 (373)
+.|++|++||+.+++.+..+. .|. ..|.+++|+|++++|++++.|+++++||+++.+....+...... ...
T Consensus 209 s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~-~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~-~~~ 286 (611)
T 1nr0_A 209 GGDGTIVLYNGVDGTKTGVFEDDSLKNVAHS-GSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRI-EDQ 286 (611)
T ss_dssp ETTSCEEEEETTTCCEEEECBCTTSSSCSSS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSG-GGC
T ss_pred ECCCcEEEEECCCCcEeeeeccccccccccC-CCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCc-cce
Confidence 999999999999998887774 454 78999999999999999999999999999988877766533211 111
Q ss_pred eeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 306 WSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 306 ~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
. ..+..++.++++++.||.|++|+...+++...+.+|..+|++++|+|+|++|++++.||.|++|+
T Consensus 287 ~--~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd 352 (611)
T 1nr0_A 287 Q--LGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWD 352 (611)
T ss_dssp E--EEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred e--EEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEE
Confidence 1 12223789999999999999999999998899999999999999999999999999999999995
No 17
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.2e-45 Score=356.15 Aligned_cols=283 Identities=29% Similarity=0.500 Sum_probs=252.8
Q ss_pred cceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 017314 79 TCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWD 158 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd 158 (373)
.+...+.+|.+.|.+++|+|++..|++++.|++|++||.... .+..+.+|...+.+++|+|+++++++++.|++|++||
T Consensus 294 ~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 294 QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 372 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEc
Confidence 356678899999999999999999999999999999998654 4567788999999999999999999999999999999
Q ss_pred cCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCCEEEEEeCCCc
Q 017314 159 VNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQTIFSGHIDGN 237 (373)
Q Consensus 159 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~sg~~dg~ 237 (373)
. +++.+..+.+|...|.+++|+| +++++++++.|++|++||. +++.+..+..| ..+.+++|+|++++|++++.|++
T Consensus 373 ~-~~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~ 449 (577)
T 2ymu_A 373 R-NGQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT 449 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred C-CCCEEEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE
Confidence 5 5678889999999999999998 6788999999999999996 45566666655 45899999999999999999999
Q ss_pred EEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcE
Q 017314 238 LRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESY 317 (373)
Q Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 317 (373)
|++||. +++.+..+..|. ..|++++|+|++++|++++.|+.|++||. +.+....+..|...+ ..++|+|+|++
T Consensus 450 v~~w~~-~~~~~~~~~~~~-~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v----~~l~~s~dg~~ 522 (577)
T 2ymu_A 450 VKLWNR-NGQLLQTLTGHS-SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSV----RGVAFSPDGQT 522 (577)
T ss_dssp EEEEET-TSCEEEEEECCS-SCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCE----EEEEECTTSSC
T ss_pred EEEEEC-CCCEEEEEcCCC-CCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCE----EEEEEcCCCCE
Confidence 999996 567778888876 78999999999999999999999999995 566677777666554 35789999999
Q ss_pred EEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 318 VAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 318 l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
|++|+.||.|++||. +++++..+.+|.++|++++|+|||++|+|+|.||+|++|+
T Consensus 523 l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 523 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp EEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 999999999999996 6788999999999999999999999999999999999997
No 18
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5e-45 Score=328.12 Aligned_cols=286 Identities=23% Similarity=0.409 Sum_probs=246.4
Q ss_pred ceEEecCccCcEEEEEEcCC-CCEEEEeeCCCcEEEEeCCCCc-----eeeeccccccceEEEEEcCCCCEEEEEeCCCc
Q 017314 80 CKHKINAHEGGCASILFEYN-SARLISGGQDKSIKLWDTNTGS-----LSSTLYGCLGSVLDLAITHDNRSVIAASSSNN 153 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~v~iwd~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~ 153 (373)
...+|+||.+.|++++|+|+ +++|+|||.|++|+|||+.+.+ +...+.+|...|.+++|+|++++|++++.|+.
T Consensus 30 l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~ 109 (340)
T 4aow_A 30 LRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGT 109 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEccccc
Confidence 46789999999999999997 6799999999999999987653 45678899999999999999999999999999
Q ss_pred EEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE-ee-cCceeEEEEccCC--CEE
Q 017314 154 LYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI-IF-HSNCNALAFSMDG--QTI 229 (373)
Q Consensus 154 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~-~~-~~~~~~~~~~~~g--~~l 229 (373)
|++|+............+...+....+.+ .+..+++|+.|+.+++||+......... .. ...+..++|++++ .++
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred ceEEeecccceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 99999999998888888988888888876 5778999999999999999766543222 22 2347888888764 578
Q ss_pred EEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeee
Q 017314 230 FSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRS 309 (373)
Q Consensus 230 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 309 (373)
++++.|+.|++||+++++.+..+..|. ..|++++|+|++++|++++.|+.+++||+++.+....+..+. ....+
T Consensus 189 ~s~~~d~~i~i~d~~~~~~~~~~~~h~-~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~-----~v~~~ 262 (340)
T 4aow_A 189 VSCGWDKLVKVWNLANCKLKTNHIGHT-GYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGD-----IINAL 262 (340)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSS-----CEEEE
T ss_pred EEEcCCCEEEEEECCCCceeeEecCCC-CcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCc-----eEEee
Confidence 899999999999999999999988886 789999999999999999999999999999988877765443 23446
Q ss_pred EECCCCcEEEEEeCCCcEEEEEccCceEEEEec---------cCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 310 CISPDESYVAAGSADGSVYIWSISKADIVRTLK---------EHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 310 ~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~---------~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+++|++.++ +++.|+.|++||+..+..+..+. +|...|++++|+|+|++|++|+.||.|+||+
T Consensus 263 ~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 263 CFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQ 334 (340)
T ss_dssp EECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEe
Confidence 788887655 56679999999999887766653 6889999999999999999999999999995
No 19
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-45 Score=329.38 Aligned_cols=286 Identities=19% Similarity=0.353 Sum_probs=257.5
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDV 159 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 159 (373)
....+.+|.+.|++++|+|++++|++|+.|+.|++||+.+++....+.+|.+.|.+++|+|++++|++++.|++|++||+
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEET
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 34568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCC-----CcEEEEEccCCee-----------eeEEeecC---ceeEE
Q 017314 160 NSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYD-----RTLKVWDLHKGYC-----------VNTIIFHS---NCNAL 220 (373)
Q Consensus 160 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D-----~~i~vwd~~~~~~-----------~~~~~~~~---~~~~~ 220 (373)
.+++.+..+. |...|.++.|+| ++.++++++.+ +.|++||+..+.. ...+..+. .+.++
T Consensus 104 ~~~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (369)
T 3zwl_B 104 SNGQCVATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA 181 (369)
T ss_dssp TTCCEEEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE
T ss_pred CCCcEEEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE
Confidence 9999988888 889999999998 67899999998 9999999976532 22222222 68899
Q ss_pred EEccCCCEEEEEeCCCcEEEEECCC-CeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecC
Q 017314 221 AFSMDGQTIFSGHIDGNLRLWDIQT-GKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATG 299 (373)
Q Consensus 221 ~~~~~g~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~ 299 (373)
+|+|++++|++|+.||.|++||+++ ++.+..+..|. ..|.+++|+|++++|++++.|+.+++||+++.+....+...
T Consensus 182 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~- 259 (369)
T 3zwl_B 182 GWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE-KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYETD- 259 (369)
T ss_dssp EECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECS-
T ss_pred EEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC-CceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecCC-
Confidence 9999999999999999999999998 78888887776 78999999999999999999999999999998877776522
Q ss_pred CeeecCeeeeEECCCCcEEEEEeCCC--------------cEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeC
Q 017314 300 NRVASNWSRSCISPDESYVAAGSADG--------------SVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADK 365 (373)
Q Consensus 300 ~~~~~~~~~~~~s~~~~~l~sgs~Dg--------------~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~ 365 (373)
.....++++|++.++++++.++ .|++||+.+++.+..+.+|...|.+++|+|+|++|++++.
T Consensus 260 ----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 335 (369)
T 3zwl_B 260 ----CPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGE 335 (369)
T ss_dssp ----SCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred ----CCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcC
Confidence 2234578999999999999998 8999999999999999999999999999999999999999
Q ss_pred CCeEEEcC
Q 017314 366 NGVVCVWT 373 (373)
Q Consensus 366 dg~i~iW~ 373 (373)
||.|+||+
T Consensus 336 dg~v~iw~ 343 (369)
T 3zwl_B 336 DGFIRLHH 343 (369)
T ss_dssp TSEEEEEE
T ss_pred CCeEEEEE
Confidence 99999995
No 20
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=7.3e-45 Score=358.36 Aligned_cols=286 Identities=28% Similarity=0.446 Sum_probs=246.3
Q ss_pred ceEEecCccCcEEEEEEcCCC-CEEEEeeCCCcEEEEeCCCC-----ceeeeccccccceEEEEEcCCCCEEEEEeCCCc
Q 017314 80 CKHKINAHEGGCASILFEYNS-ARLISGGQDKSIKLWDTNTG-----SLSSTLYGCLGSVLDLAITHDNRSVIAASSSNN 153 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~v~iwd~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~ 153 (373)
....+.+|.+.|++++|++++ .+|+|||.|++|++||+.+. .....+.+|...|.+++|+|++++|++|+.|++
T Consensus 374 ~~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~ 453 (694)
T 3dm0_A 374 LKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGE 453 (694)
T ss_dssp EEEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred hhhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 345789999999999999875 68999999999999999764 345678899999999999999999999999999
Q ss_pred EEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe---ec-CceeEEEEccCC--C
Q 017314 154 LYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII---FH-SNCNALAFSMDG--Q 227 (373)
Q Consensus 154 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~---~~-~~~~~~~~~~~g--~ 227 (373)
|+|||+.+++....+.+|...|.+++|+| ++.+++|||.|++|++||........... .| ..+.+++|+|++ .
T Consensus 454 v~vwd~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 454 LRLWDLAAGVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred EEEEECCCCcceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 99999999999999999999999999998 57789999999999999986543322111 12 348999999987 6
Q ss_pred EEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCee
Q 017314 228 TIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWS 307 (373)
Q Consensus 228 ~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
.+++|+.|++|++||+++++....+..|. ..|++++|+|++++|++++.|+.|++||+++.+.+..+..+. .+.
T Consensus 533 ~l~s~s~d~~v~vwd~~~~~~~~~~~~h~-~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~-----~v~ 606 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSNCKLRSTLAGHT-GYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANS-----VIH 606 (694)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSS-----CEE
T ss_pred eEEEEeCCCeEEEEECCCCcEEEEEcCCC-CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCC-----cEE
Confidence 89999999999999999999988888886 789999999999999999999999999999887766654332 344
Q ss_pred eeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCC-------------------ccEEEEEEcCCCCcEEEEeCCCe
Q 017314 308 RSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHT-------------------APVLSCSWSGLGKPLASADKNGV 368 (373)
Q Consensus 308 ~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~-------------------~~V~~~~~s~~g~~l~s~s~dg~ 368 (373)
.++|+|++.+|++++. +.|+|||+.++..+..+..+. ..+++++|||+|++|++|+.||.
T Consensus 607 ~~~~sp~~~~l~~~~~-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~ 685 (694)
T 3dm0_A 607 ALCFSPNRYWLCAATE-HGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGV 685 (694)
T ss_dssp EEEECSSSSEEEEEET-TEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEcCCCcEEEEEcC-CCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCe
Confidence 5789999998887765 559999999999888775332 13789999999999999999999
Q ss_pred EEEcC
Q 017314 369 VCVWT 373 (373)
Q Consensus 369 i~iW~ 373 (373)
|+||+
T Consensus 686 i~iW~ 690 (694)
T 3dm0_A 686 IRVWG 690 (694)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 99995
No 21
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.7e-45 Score=335.04 Aligned_cols=285 Identities=16% Similarity=0.225 Sum_probs=254.8
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc------eeeeccccccceEEEEEcCC----C---CEEE
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGS------LSSTLYGCLGSVLDLAITHD----N---RSVI 146 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~------~~~~~~~~~~~v~~~~~~~~----~---~~l~ 146 (373)
....+.+|.+.|++++|+| ++|++|+.|++|++||+.++. ....+.+|...|.+++|+|+ + .+|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 4567889999999999998 899999999999999999887 67888899999999999999 9 9999
Q ss_pred EEeCCCcEEEEEcCCCee-----EEEeecC-----CCcEEEEEEe----eCCCCE-EEEEeCCCcEEEEEccC------C
Q 017314 147 AASSSNNLYVWDVNSGRV-----RHTLTGH-----TDKVCAVDVS----KISSRH-VVSAAYDRTLKVWDLHK------G 205 (373)
Q Consensus 147 s~s~d~~i~iwd~~~~~~-----~~~~~~h-----~~~v~~~~~~----~~~~~~-~~s~s~D~~i~vwd~~~------~ 205 (373)
+++.|+.|++||+.+++. ...+..| ...|.+++|+ + ++.+ +++++.|+.|++||+.+ +
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCcccccccc
Confidence 999999999999998886 8888999 5999999999 7 5778 99999999999999988 6
Q ss_pred eeee-----EEee--------cCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEec---c---cccceEEEEEc
Q 017314 206 YCVN-----TIIF--------HSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAA---H---SLAAVTSISLS 266 (373)
Q Consensus 206 ~~~~-----~~~~--------~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~---~---~~~~v~~~~~~ 266 (373)
..+. .+.. ...+.+++|+|++ ++++|+.||.|++||+++++.+..+.. | . ..|.+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~-~~i~~i~~~ 242 (397)
T 1sq9_A 165 LTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNS-NSIRSVKFS 242 (397)
T ss_dssp TTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCC-CCEEEEEEC
T ss_pred ceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccC-CccceEEEC
Confidence 5555 5543 3458999999999 999999999999999999999988887 6 4 789999999
Q ss_pred CCCCEEEEeeCC---CeEEEEEccccceeeeeee-------------cCCeeecCeeeeEECCCCcEEEEEeCCCcEEEE
Q 017314 267 RSGNIILTSGRD---NLHNLFDIRSLEVCGSLRA-------------TGNRVASNWSRSCISPDESYVAAGSADGSVYIW 330 (373)
Q Consensus 267 ~~~~~l~s~~~d---~~i~~~d~~~~~~~~~~~~-------------~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iw 330 (373)
|++++|++++.| +.+++||+++.+....+.. +... ...++++|++.+|++|+.||.|++|
T Consensus 243 ~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 243 PQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW----VMSLSFNDSGETLCSAGWDGKLRFW 318 (397)
T ss_dssp SSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC----EEEEEECSSSSEEEEEETTSEEEEE
T ss_pred CCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCc----EEEEEECCCCCEEEEEeCCCeEEEE
Confidence 999999999999 9999999999888777765 4433 3457899999999999999999999
Q ss_pred EccCceEEEEec------cC---------------CccEEEEEEcCCC----------CcEEEEeCCCeEEEcC
Q 017314 331 SISKADIVRTLK------EH---------------TAPVLSCSWSGLG----------KPLASADKNGVVCVWT 373 (373)
Q Consensus 331 d~~~~~~~~~l~------~h---------------~~~V~~~~~s~~g----------~~l~s~s~dg~i~iW~ 373 (373)
|+.+++.+..+. +| ..+|++++|+|+| ++|++++.||.|++|+
T Consensus 319 d~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 319 DVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp ETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred EcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 999999999999 88 9999999999998 7999999999999995
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-43 Score=341.77 Aligned_cols=283 Identities=29% Similarity=0.510 Sum_probs=251.2
Q ss_pred cceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 017314 79 TCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWD 158 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd 158 (373)
.+...+.+|...|.+++|+|++..|++++.|++|++||.. ++....+.+|...|.+++|+|++..+++++.|++|++||
T Consensus 253 ~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~ 331 (577)
T 2ymu_A 253 QLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWN 331 (577)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred CEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEe
Confidence 3566788999999999999999999999999999999964 567788899999999999999999999999999999999
Q ss_pred cCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCCEEEEEeCCCc
Q 017314 159 VNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQTIFSGHIDGN 237 (373)
Q Consensus 159 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~sg~~dg~ 237 (373)
.... ....+.+|...|.+++++| ++.++++|+.|++|++||. ++..+..+..| ..+.+++|+|+|++|++++.|+.
T Consensus 332 ~~~~-~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~ 408 (577)
T 2ymu_A 332 RNGQ-HLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT 408 (577)
T ss_dssp TTSC-EEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSE
T ss_pred CCCC-eeEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCE
Confidence 8654 5667889999999999988 6789999999999999996 45666666655 45899999999999999999999
Q ss_pred EEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcE
Q 017314 238 LRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESY 317 (373)
Q Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 317 (373)
|++||. +++.+..+..|. ..|++++|+|++++|++++.|+.+++||.. .+....+..+...+ ..++|+|++++
T Consensus 409 v~~~~~-~~~~~~~~~~~~-~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~-~~~~~~~~~~~~~v----~~~~~spd~~~ 481 (577)
T 2ymu_A 409 VKLWNR-NGQLLQTLTGHS-SSVWGVAFSPDDQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSV----RGVAFSPDGQT 481 (577)
T ss_dssp EEEECT-TCCEEEEEECCS-SCEEEEEECTTSSEEEEEETTSEEEEEETT-SCEEEEEECCSSCE----EEEEECTTSCE
T ss_pred EEEEeC-CCCEEEEecCCC-CCeEEEEECCCCCEEEEEcCCCEEEEEECC-CCEEEEEcCCCCCE----EEEEEcCCCCE
Confidence 999995 567778888876 789999999999999999999999999964 45556666655444 34789999999
Q ss_pred EEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 318 VAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 318 l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
|++|+.|+.|++||. ++++++.+.+|..+|++++|+|+|++||+++.||.|+||+
T Consensus 482 las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 482 IASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWN 536 (577)
T ss_dssp EEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEe
Confidence 999999999999995 6788999999999999999999999999999999999996
No 23
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=5.1e-44 Score=327.54 Aligned_cols=286 Identities=15% Similarity=0.265 Sum_probs=241.1
Q ss_pred ceEEecCccCcEEEEEEcCCC-CEEEEeeCCCcEEEEeCCCCceeeecc--ccccceEEEEEcC-CCCEEEEEeCCCcEE
Q 017314 80 CKHKINAHEGGCASILFEYNS-ARLISGGQDKSIKLWDTNTGSLSSTLY--GCLGSVLDLAITH-DNRSVIAASSSNNLY 155 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~l~s~s~d~~i~ 155 (373)
....+.+|.+.|++++|+|++ ++|++|+.|++|++||+.+++....+. +|...|.+++|+| ++++|++++.|++|+
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 144 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATT 144 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEE
Confidence 456788999999999999999 999999999999999999887766654 6999999999999 678999999999999
Q ss_pred EEEcCCCeeEEEeecC---CCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCC-EEE
Q 017314 156 VWDVNSGRVRHTLTGH---TDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQ-TIF 230 (373)
Q Consensus 156 iwd~~~~~~~~~~~~h---~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~-~l~ 230 (373)
+||+.+ .....+..| ...|.+++|+| ++.++++|+.|++|++||+ ++.++..+..| ..+.+++|+|++. +++
T Consensus 145 iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 221 (383)
T 3ei3_B 145 LRDFSG-SVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMA 221 (383)
T ss_dssp EEETTS-CEEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEE
T ss_pred EEECCC-CceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEE
Confidence 999986 445555444 48899999998 6789999999999999999 46666666655 4599999999999 999
Q ss_pred EEeCCCcEEEEECCC----CeeeEEEecccccceEEEEEcC-CCCEEEEeeCCCeEEEEEccccceeeeeeecCCe----
Q 017314 231 SGHIDGNLRLWDIQT----GKLLSEVAAHSLAAVTSISLSR-SGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNR---- 301 (373)
Q Consensus 231 sg~~dg~i~iwd~~~----~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---- 301 (373)
+|+.|+.|++||+++ +..+..+ .|. ..|++++|+| ++++|++++.|+.+++||+++.+....+..+...
T Consensus 222 s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~-~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 222 TSSVDATVKLWDLRNIKDKNSYIAEM-PHE-KPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQH 299 (383)
T ss_dssp EEETTSEEEEEEGGGCCSTTCEEEEE-ECS-SCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTT
T ss_pred EEeCCCEEEEEeCCCCCcccceEEEe-cCC-CceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccc
Confidence 999999999999987 5566655 454 7899999999 9999999999999999999988776666544321
Q ss_pred ---eec------CeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEecc--CCccEEEEEEcCCCCcEEEEeCCCeEE
Q 017314 302 ---VAS------NWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE--HTAPVLSCSWSGLGKPLASADKNGVVC 370 (373)
Q Consensus 302 ---~~~------~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~--h~~~V~~~~~s~~g~~l~s~s~dg~i~ 370 (373)
+.. ....++++|++++ +|+.||.|+|||+.+++++..+.+ |.+.+..++|+|+|++|++++ ||.|+
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~ 376 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNIL 376 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEE
T ss_pred ccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEE
Confidence 111 1122456777777 788999999999999999999987 456777889999999999997 99999
Q ss_pred EcC
Q 017314 371 VWT 373 (373)
Q Consensus 371 iW~ 373 (373)
||+
T Consensus 377 iw~ 379 (383)
T 3ei3_B 377 IWN 379 (383)
T ss_dssp EEE
T ss_pred EEe
Confidence 995
No 24
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.3e-44 Score=333.10 Aligned_cols=248 Identities=24% Similarity=0.436 Sum_probs=229.2
Q ss_pred cceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 017314 79 TCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWD 158 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd 158 (373)
.+.+.+.+|.+.|.+++|+|++++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++++|++|+.|++|++||
T Consensus 141 ~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd 220 (410)
T 1vyh_C 141 DFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE 220 (410)
T ss_dssp CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEE
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccC------------
Q 017314 159 VNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMD------------ 225 (373)
Q Consensus 159 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~------------ 225 (373)
+.++.++.++.+|...|.++.+++ ++.++++|+.|++|++||+.++.+...+..|. .+.+++|+|+
T Consensus 221 ~~~~~~~~~~~~h~~~v~~~~~~~-~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 299 (410)
T 1vyh_C 221 VQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGS 299 (410)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSC
T ss_pred CCCCcEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccc
Confidence 999999999999999999999987 67899999999999999999998888876664 4899999996
Q ss_pred --------CCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeee
Q 017314 226 --------GQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRA 297 (373)
Q Consensus 226 --------g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~ 297 (373)
|.+|++|+.|++|++||+++++++..+.+|. ..|++++|+|++++|++++.|+.|++||+.+.+....+..
T Consensus 300 ~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~-~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~ 378 (410)
T 1vyh_C 300 ETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD-NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA 378 (410)
T ss_dssp C-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS-SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEEC
T ss_pred cccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC-CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcC
Confidence 6789999999999999999999999998886 7899999999999999999999999999999888888877
Q ss_pred cCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEc
Q 017314 298 TGNRVASNWSRSCISPDESYVAAGSADGSVYIWSI 332 (373)
Q Consensus 298 ~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~ 332 (373)
|...+ ..++|+|++.+|++|+.||+|+||++
T Consensus 379 h~~~v----~~l~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 379 HEHFV----TSLDFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp CSSCE----EEEEECSSSSCEEEEETTSEEEEEC-
T ss_pred CCCcE----EEEEEcCCCCEEEEEeCCCcEEEEeC
Confidence 76554 34789999999999999999999986
No 25
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.6e-44 Score=317.31 Aligned_cols=247 Identities=15% Similarity=0.228 Sum_probs=218.2
Q ss_pred eeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEE
Q 017314 122 LSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWD 201 (373)
Q Consensus 122 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd 201 (373)
...++.+|.+.|.+++|+|++.+|++++.|++|++||+.+++.+..+.+|..+|.++.|++ +++++++|+.|++|++||
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEE
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEE
Confidence 4567889999999999999999999999999999999999999999999999999999998 678999999999999999
Q ss_pred ccCCeeeeEEeecC-ceeEEEEccCCCEEEEEeCCCcEEEEECCCC-eeeEEEecccccceEEEEEcC-CCCEEEEeeCC
Q 017314 202 LHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGHIDGNLRLWDIQTG-KLLSEVAAHSLAAVTSISLSR-SGNIILTSGRD 278 (373)
Q Consensus 202 ~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d 278 (373)
+.++.++..+..|. .+.+++|+|++++|++|+.||+|++||++++ .....+..|. ..|.+++|+| ++.+|++++.|
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~~l~sgs~D 162 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE-HFVMCVAFNPKDPSTFASGCLD 162 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC-SCEEEEEECTTCTTEEEEEETT
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC-CcEEEEEECCCCCCEEEEEeCC
Confidence 99999988887765 4899999999999999999999999999887 4445566665 7899999999 67899999999
Q ss_pred CeEEEEEccccceeeeeeecCCeeecCeeeeEEC--CCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCC
Q 017314 279 NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCIS--PDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGL 356 (373)
Q Consensus 279 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~ 356 (373)
+.+++||++.......+..... .....+.++ |++.+|++|+.||+|++||+.+++++..+.+|...|.+++|+|+
T Consensus 163 ~~v~iwd~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~ 239 (304)
T 2ynn_A 163 RTVKVWSLGQSTPNFTLTTGQE---RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (304)
T ss_dssp SEEEEEETTCSSCSEEEECCCT---TCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred CeEEEEECCCCCccceeccCCc---CcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCC
Confidence 9999999987665444432211 112234455 47889999999999999999999999999999999999999999
Q ss_pred CCcEEEEeCCCeEEEcC
Q 017314 357 GKPLASADKNGVVCVWT 373 (373)
Q Consensus 357 g~~l~s~s~dg~i~iW~ 373 (373)
+++|++|+.||.|++|+
T Consensus 240 ~~~l~s~s~Dg~i~iWd 256 (304)
T 2ynn_A 240 LPIIISGSEDGTLKIWN 256 (304)
T ss_dssp SSEEEEEETTSCEEEEE
T ss_pred CCEEEEEcCCCeEEEEE
Confidence 99999999999999995
No 26
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.4e-44 Score=319.79 Aligned_cols=270 Identities=17% Similarity=0.286 Sum_probs=243.5
Q ss_pred HHhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccc
Q 017314 51 KLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCL 130 (373)
Q Consensus 51 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 130 (373)
.+++.+.|+.++.|+.... ...+...+.+|..+|.++.|++++..+++|+.|++|++||+.+++.+..+..+.
T Consensus 50 ~l~tgs~D~~v~vW~~~~~-------~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~ 122 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDE-------RLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGP 122 (321)
T ss_dssp EEEEEETTSCEEEEEEETT-------EEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCT
T ss_pred EEEEEcCCCCEEEEECCCC-------CeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCC
Confidence 4677788888888864321 112345688999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeE
Q 017314 131 GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNT 210 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~ 210 (373)
..+.+++|+|++++|++++.|+.|++||+.+++....+..|...|.+++|+| +++++++|+.|++|++||+++++++.+
T Consensus 123 ~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 123 VDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHT 201 (321)
T ss_dssp TCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEE
Confidence 9999999999999999999999999999999999999999999999999998 688999999999999999999999888
Q ss_pred EeecC-ceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEcccc
Q 017314 211 IIFHS-NCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSL 289 (373)
Q Consensus 211 ~~~~~-~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~ 289 (373)
+..|. .+.+++|+|++++|++|+.||+|++||+++++.+..+..|. ..|.+++|+|++++|++++.|+.+++||+++.
T Consensus 202 ~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 202 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHA-SWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCC-CceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 87664 58999999999999999999999999999999998888886 78999999999999999999999999999999
Q ss_pred ceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEcc
Q 017314 290 EVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSIS 333 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~ 333 (373)
+.+..+..+...+ ..++|+|++.+|++|+.||.|+|||.+
T Consensus 281 ~~~~~~~~h~~~v----~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 281 TCVHTFFDHQDQV----WGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEECCCSSCE----EEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEEcCCCCcE----EEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 8888887766544 347899999999999999999999964
No 27
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=9.1e-43 Score=312.61 Aligned_cols=281 Identities=17% Similarity=0.309 Sum_probs=246.4
Q ss_pred EecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecc-----ccccceEEEEEcCCCCEEEEEeCCCcEEEE
Q 017314 83 KINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLY-----GCLGSVLDLAITHDNRSVIAASSSNNLYVW 157 (373)
Q Consensus 83 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~d~~i~iw 157 (373)
...+|.+.|++++|+|++++|++++ |+.|++||+.++.....+. +|...|.+++|+|++++|++++.|+.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3457999999999999999999999 9999999998875433322 788999999999999999999999999999
Q ss_pred EcCCCe--eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCCEEEEEeC
Q 017314 158 DVNSGR--VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQTIFSGHI 234 (373)
Q Consensus 158 d~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~sg~~ 234 (373)
|+.+++ ....+.+|...|.+++++| +++++++++.|+.|++||++++.....+..+ ..+.+++|+|++.+|++++.
T Consensus 125 d~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 125 DLAAPTPRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp ECCCC--EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred ECCCCCcceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEec
Confidence 999887 6778889999999999988 6789999999999999999999888887654 45899999999999999999
Q ss_pred CCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCC
Q 017314 235 DGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPD 314 (373)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 314 (373)
||.|++||+++++.+..+... ..+.+++|+|++++|++++.|+.+++||++..+.. .+..+... ...++++|+
T Consensus 204 dg~i~~~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~----v~~~~~~~~ 276 (337)
T 1gxr_A 204 DNTVRSWDLREGRQLQQHDFT--SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESC----VLSLKFAYC 276 (337)
T ss_dssp TSEEEEEETTTTEEEEEEECS--SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSC----EEEEEECTT
T ss_pred CCcEEEEECCCCceEeeecCC--CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccc----eeEEEECCC
Confidence 999999999999888776533 67999999999999999999999999999887653 33333332 345789999
Q ss_pred CcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 315 ESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 315 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+++|++++.||.|++||+.+++.+... .|..+|.+++|+|++++|++++.||.|++|+
T Consensus 277 ~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~ 334 (337)
T 1gxr_A 277 GKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISVDDKYIVTGSGDKKATVYE 334 (337)
T ss_dssp SSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSCEEEEE
T ss_pred CCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECCCCCEEEEecCCCeEEEEE
Confidence 999999999999999999998887543 5888999999999999999999999999995
No 28
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=321.40 Aligned_cols=291 Identities=18% Similarity=0.287 Sum_probs=243.7
Q ss_pred cccceEEecCccCcEEEEEEcCCCCEE-EEeeC---CCcEEEEeCCCCceeee-ccccccceEEEEEcCC---CCEEEEE
Q 017314 77 PSTCKHKINAHEGGCASILFEYNSARL-ISGGQ---DKSIKLWDTNTGSLSST-LYGCLGSVLDLAITHD---NRSVIAA 148 (373)
Q Consensus 77 ~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~---D~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~---~~~l~s~ 148 (373)
|....+.+.+|.+.|++++|+|++..+ ++|+. |++|++||+.+++.... ..+|...|.+++|+|+ +.+|+++
T Consensus 7 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~ 86 (357)
T 3i2n_A 7 PQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATG 86 (357)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEE
T ss_pred hHHhhhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEe
Confidence 334556778899999999999999755 55665 99999999998876544 3478999999999999 6999999
Q ss_pred eCCCcEEEEEcCCCe-eEEEeecCCCcEEEEEEee-----CCCCEEEEEeCCCcEEEEEccCCe-eeeEEeecC-----c
Q 017314 149 SSSNNLYVWDVNSGR-VRHTLTGHTDKVCAVDVSK-----ISSRHVVSAAYDRTLKVWDLHKGY-CVNTIIFHS-----N 216 (373)
Q Consensus 149 s~d~~i~iwd~~~~~-~~~~~~~h~~~v~~~~~~~-----~~~~~~~s~s~D~~i~vwd~~~~~-~~~~~~~~~-----~ 216 (373)
+.|+.|++||+.+++ +...+.+|...|.++.+.+ .+++++++++.|++|++||+.++. ....+..+. .
T Consensus 87 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~ 166 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRD 166 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCC
T ss_pred cCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCc
Confidence 999999999999988 8889999999999997643 257799999999999999999876 556554432 5
Q ss_pred eeEEE----EccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcC---CCCEEEEeeCCCeEEEEEcccc
Q 017314 217 CNALA----FSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSR---SGNIILTSGRDNLHNLFDIRSL 289 (373)
Q Consensus 217 ~~~~~----~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~d~~i~~~d~~~~ 289 (373)
+.+++ |+|++.++++|+.||.|++||+++++.... ..+. ..+.+++|+| ++++|++++.|+.+++||+++.
T Consensus 167 v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~-~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 167 CWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIK-NGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp EEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECS-SCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred eEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCC-CceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 77777 788999999999999999999999887544 3343 6899999999 9999999999999999999877
Q ss_pred ceeeeee-----ecCCeeecCeeeeEECCCCc-EEEEEeCCCcEEEEEccCc-------------------eEEEEeccC
Q 017314 290 EVCGSLR-----ATGNRVASNWSRSCISPDES-YVAAGSADGSVYIWSISKA-------------------DIVRTLKEH 344 (373)
Q Consensus 290 ~~~~~~~-----~~~~~~~~~~~~~~~s~~~~-~l~sgs~Dg~i~iwd~~~~-------------------~~~~~l~~h 344 (373)
+....+. .+... +..++++|++. +|++|+.||.|++||+..+ +.+..+.+|
T Consensus 245 ~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 320 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKST----VWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLS 320 (357)
T ss_dssp ETTTEEEEEEEECCSSC----EEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECC
T ss_pred CcccceeeeccCCCcCC----EEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccC
Confidence 6554443 33333 34578999998 8999999999999999753 467788899
Q ss_pred CccEEEEEEcCCCCcEE-EEeCCCeEEEcC
Q 017314 345 TAPVLSCSWSGLGKPLA-SADKNGVVCVWT 373 (373)
Q Consensus 345 ~~~V~~~~~s~~g~~l~-s~s~dg~i~iW~ 373 (373)
..+|++++|+|+|++|+ +++.||.|+||+
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLI 350 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEE
Confidence 99999999999999998 899999999995
No 29
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-43 Score=310.81 Aligned_cols=281 Identities=16% Similarity=0.324 Sum_probs=248.7
Q ss_pred ccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEE
Q 017314 78 STCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVW 157 (373)
Q Consensus 78 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iw 157 (373)
....+.+.+|.+.|++++| +++++|++|+.||.|++||+.++.....+..|...|.+++|+|+++++++++.|+.|++|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGV 86 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred HHHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEE
Confidence 3467789999999999999 999999999999999999999999889999999999999999999999999999999999
Q ss_pred EcCCC---eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEcc-CCCEEEEE
Q 017314 158 DVNSG---RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSM-DGQTIFSG 232 (373)
Q Consensus 158 d~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~-~g~~l~sg 232 (373)
++... +....+.+|...|.++.+. ++.+++++.|++|++|| .+.....+..+ ..+.++++.| ++.+++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTA 161 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEE
T ss_pred EeeecCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEE
Confidence 98654 5678889999999999883 56899999999999999 55566666554 4588899988 99999999
Q ss_pred eCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEEC
Q 017314 233 HIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCIS 312 (373)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 312 (373)
+.||.|++|| ..+....+...+...+.+++|+|++. +++++.|+.+++||+++.+....+..+...+ ..++++
T Consensus 162 ~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i----~~~~~~ 234 (313)
T 3odt_A 162 SADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFV----YCIKLL 234 (313)
T ss_dssp ETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCE----EEEEEC
T ss_pred ECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceE----EEEEEe
Confidence 9999999999 45566677664458899999999998 9999999999999999988888887666544 347899
Q ss_pred CCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 313 PDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 313 ~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
|++ +|++|+.||.|++||+.+++++..+..|..+|.+++|+|+|+ +++++.||.|++|+
T Consensus 235 ~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~ 293 (313)
T 3odt_A 235 PNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFS 293 (313)
T ss_dssp TTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEE
T ss_pred cCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEe
Confidence 999 688999999999999999999999999999999999999998 66799999999995
No 30
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-43 Score=328.01 Aligned_cols=279 Identities=18% Similarity=0.279 Sum_probs=251.1
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeE
Q 017314 86 AHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVR 165 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~ 165 (373)
+|.+.|++++|+|++++|++|+.|+.|++|| .++.....+.+|...|.+++|+|++++|++++.|+.|++||+.+++..
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 184 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVM 184 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEE
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEE
Confidence 3788999999999999999999999999999 677888889999999999999999999999999999999999999999
Q ss_pred EEeecCCCc---------------EEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCCEE
Q 017314 166 HTLTGHTDK---------------VCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQTI 229 (373)
Q Consensus 166 ~~~~~h~~~---------------v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~~l 229 (373)
..+..|... +.++.+++. ..+++++.|+.|++||+.++.....+..+ ..+.+++|+|++++|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 185 QHFELKETGGSSINAENHSGDGSLGVDVEWVDD--DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp EEECCC---------------CCCBSCCEEEET--TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEE
T ss_pred EEeeccccCccceeeccccCCcceeeEEEEcCC--CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEE
Confidence 999888877 888999873 57999999999999999998887777555 458999999999999
Q ss_pred EEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeee
Q 017314 230 FSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRS 309 (373)
Q Consensus 230 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 309 (373)
++++.||.|++||+++++.+..+..|. ..+.+++|+|++ ++++++.|+.+++||+++.+....+..+...+ ..+
T Consensus 263 ~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i----~~~ 336 (425)
T 1r5m_A 263 LSASDDGTLRIWHGGNGNSQNCFYGHS-QSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPI----FAG 336 (425)
T ss_dssp EEEETTSCEEEECSSSBSCSEEECCCS-SCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCE----EEE
T ss_pred EEEcCCCEEEEEECCCCccceEecCCC-ccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccE----EEE
Confidence 999999999999999999888887776 789999999999 99999999999999999988877777655443 347
Q ss_pred EECCCCcEEEEEeCCCcEEEEEccCce--------------------EEEEeccCCc--cEEEEEEcCCCCcEEEEeCCC
Q 017314 310 CISPDESYVAAGSADGSVYIWSISKAD--------------------IVRTLKEHTA--PVLSCSWSGLGKPLASADKNG 367 (373)
Q Consensus 310 ~~s~~~~~l~sgs~Dg~i~iwd~~~~~--------------------~~~~l~~h~~--~V~~~~~s~~g~~l~s~s~dg 367 (373)
+++|++.+|++|+.||.|++||+.++. ++..+.+|.. +|.+++|+|++++|++++.||
T Consensus 337 ~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 416 (425)
T 1r5m_A 337 RISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ 416 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS
T ss_pred EEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc
Confidence 899999999999999999999999888 8899999976 999999999999999999999
Q ss_pred eEEEcC
Q 017314 368 VVCVWT 373 (373)
Q Consensus 368 ~i~iW~ 373 (373)
.|++|+
T Consensus 417 ~i~iw~ 422 (425)
T 1r5m_A 417 EGSVVA 422 (425)
T ss_dssp CCEEEE
T ss_pred eEEEEe
Confidence 999995
No 31
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.3e-44 Score=333.76 Aligned_cols=295 Identities=14% Similarity=0.243 Sum_probs=241.0
Q ss_pred ccceEEe-cCccCcEEEEEEcC-CCCEEEEeeCCCcEEEEeCCC---Ccee--eeccccccceEEEEEcCCCCEEEEEeC
Q 017314 78 STCKHKI-NAHEGGCASILFEY-NSARLISGGQDKSIKLWDTNT---GSLS--STLYGCLGSVLDLAITHDNRSVIAASS 150 (373)
Q Consensus 78 ~~~~~~~-~~h~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~---~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~s~ 150 (373)
......+ .+|.+.|++++|+| ++.+|++|+.|++|+|||+.+ +... ....+|.+.|.+++|+|++.+|++++.
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~ 131 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSK 131 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeC
Confidence 3456677 89999999999999 999999999999999999876 4321 112258999999999999999999999
Q ss_pred CCcEEEEEcC---CCeeEEEeec------------CCCcEEEEEEee-CCCCEEEEEeCCCcEEEEEccCCeeeeEEee-
Q 017314 151 SNNLYVWDVN---SGRVRHTLTG------------HTDKVCAVDVSK-ISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF- 213 (373)
Q Consensus 151 d~~i~iwd~~---~~~~~~~~~~------------h~~~v~~~~~~~-~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~- 213 (373)
|++|++||+. +++....+.+ +...+.++.+.. .++.++++|+.|++|++||++++.++..+..
T Consensus 132 dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 211 (437)
T 3gre_A 132 DGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENS 211 (437)
T ss_dssp TSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccC
Confidence 9999999995 5555444433 344555555321 2577899999999999999999999888875
Q ss_pred --cCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEc----CCCCEEEEeeCCCeEEEEEcc
Q 017314 214 --HSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLS----RSGNIILTSGRDNLHNLFDIR 287 (373)
Q Consensus 214 --~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~s~~~d~~i~~~d~~ 287 (373)
...+.+++|+|++.+|++|+.||.|++||+++++.+..+...+...|++++++ |++.+|++++.|+.+++||++
T Consensus 212 ~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~ 291 (437)
T 3gre_A 212 PRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFV 291 (437)
T ss_dssp GGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETT
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcC
Confidence 35699999999999999999999999999999999888863333689999555 567899999999999999999
Q ss_pred ccceeeeeeecCCee----------------------ecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEecc--
Q 017314 288 SLEVCGSLRATGNRV----------------------ASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE-- 343 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~----------------------~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~-- 343 (373)
+.+....+..+...+ ...+..++++ ++.+|++|+.||.|++||+.+++....+.+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 370 (437)
T 3gre_A 292 KGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPS 370 (437)
T ss_dssp TTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC-
T ss_pred CCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEeccc
Confidence 888777766443211 1123446777 779999999999999999999887776665
Q ss_pred -----------------------------------CCccEEEEEEcCC--CCcEEEEeCCCeEEEcC
Q 017314 344 -----------------------------------HTAPVLSCSWSGL--GKPLASADKNGVVCVWT 373 (373)
Q Consensus 344 -----------------------------------h~~~V~~~~~s~~--g~~l~s~s~dg~i~iW~ 373 (373)
|...|++++|+++ +.+|++|+.||.|+||+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 371 RFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp -CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred ccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 8899999999998 77999999999999996
No 32
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=7.5e-44 Score=323.36 Aligned_cols=284 Identities=17% Similarity=0.295 Sum_probs=241.2
Q ss_pred EecCccCcEEEEEEcCC----CCEEEEeeCCCcEEEEeCCCCceeeeccc-----cccceEEEEEcCC----CCEEEEEe
Q 017314 83 KINAHEGGCASILFEYN----SARLISGGQDKSIKLWDTNTGSLSSTLYG-----CLGSVLDLAITHD----NRSVIAAS 149 (373)
Q Consensus 83 ~~~~h~~~v~~~~~~~~----~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-----~~~~v~~~~~~~~----~~~l~s~s 149 (373)
...+|.++|++++|+|+ ...+++++.++.|++||+.++..+..+.. |...|.+++|+|+ +.+|++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 44589999999999984 45677777788999999998877666654 4477999999999 66999999
Q ss_pred CCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE---e-ecCceeEEEEccC
Q 017314 150 SSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI---I-FHSNCNALAFSMD 225 (373)
Q Consensus 150 ~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~---~-~~~~~~~~~~~~~ 225 (373)
.|++|++||+.+++.+..+.+|...|.+++|+|.++.++++|+.|++|++||++++.....+ . +...+.+++|+|+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 172 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLL 172 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTT
T ss_pred CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCC
Confidence 99999999999999999999999999999999867889999999999999999999888776 2 3456999999999
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeeEEEec----------------------------ccccceEEEEEcCCCCEEEEeeC
Q 017314 226 GQTIFSGHIDGNLRLWDIQTGKLLSEVAA----------------------------HSLAAVTSISLSRSGNIILTSGR 277 (373)
Q Consensus 226 g~~l~sg~~dg~i~iwd~~~~~~~~~~~~----------------------------~~~~~v~~~~~~~~~~~l~s~~~ 277 (373)
+.+|++|+.||.|++||+++++....+.. |. ..|.+++|+ +++|++++.
T Consensus 173 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~--~~~l~~~~~ 249 (366)
T 3k26_A 173 GEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHR-NYVDCVRWL--GDLILSKSC 249 (366)
T ss_dssp SSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCS-SCCCEEEEE--TTEEEEECS
T ss_pred CCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCc-ceEEEEEEc--CCEEEEEec
Confidence 99999999999999999998765443332 43 789999998 779999999
Q ss_pred CCeEEEEEccccce--------------eeeeeecCCeeecCeeeeEECCC--CcEEEEEeCCCcEEEEEccCce----E
Q 017314 278 DNLHNLFDIRSLEV--------------CGSLRATGNRVASNWSRSCISPD--ESYVAAGSADGSVYIWSISKAD----I 337 (373)
Q Consensus 278 d~~i~~~d~~~~~~--------------~~~~~~~~~~~~~~~~~~~~s~~--~~~l~sgs~Dg~i~iwd~~~~~----~ 337 (373)
|+.+++||+++... ...+..+...+ ..++++|+ +.+|++|+.||.|++||+.+++ .
T Consensus 250 d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v----~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 325 (366)
T 3k26_A 250 ENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDI----WYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAK 325 (366)
T ss_dssp SSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCS----SCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCE
T ss_pred CCEEEEEeCCCccccccccccCCcchheeccccccCCcE----EEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCcccc
Confidence 99999999887643 33333333322 33567888 9999999999999999999875 4
Q ss_pred EEEeccC--CccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 338 VRTLKEH--TAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 338 ~~~l~~h--~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
...+.+| ..+|++++|+|+|++|++++.||.|++|+
T Consensus 326 ~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd 363 (366)
T 3k26_A 326 CTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWD 363 (366)
T ss_dssp EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEE
Confidence 5577777 79999999999999999999999999995
No 33
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=3.7e-43 Score=317.02 Aligned_cols=246 Identities=17% Similarity=0.225 Sum_probs=210.2
Q ss_pred cCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeee----ccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 017314 85 NAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSST----LYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 85 ~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~----~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 160 (373)
..|..+|.+++|++++ .|++|+.||+|+|||+.+++.... +.+|.+.|.+++|+|++++|++|+.|++|++||+.
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~ 157 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLA 157 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 3467889999999984 788999999999999998875433 45899999999999999999999999999999999
Q ss_pred CCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec---CceeEEEEccC-CCEEEEEeCCC
Q 017314 161 SGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH---SNCNALAFSMD-GQTIFSGHIDG 236 (373)
Q Consensus 161 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~-g~~l~sg~~dg 236 (373)
+++++.++.+|.+.|.+++|++.....++||+.|++|++||++++++...+..+ ..+.+++|+|+ +.+|++|+.||
T Consensus 158 ~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg 237 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG 237 (344)
T ss_dssp TTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS
T ss_pred CCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC
Confidence 999999999999999999999876778999999999999999999887765432 34789999994 67889999999
Q ss_pred cEEEEECCCCeeeEEEecccccceEEEEEcCCC-CEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCC
Q 017314 237 NLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSG-NIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDE 315 (373)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 315 (373)
+|++||+++++.+..+..|. ..|++++|+|++ ++|++++.|+.|++||+++.+.. .+..|...+ ..++|+|++
T Consensus 238 ~v~~wd~~~~~~~~~~~~h~-~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V----~~v~~sp~~ 311 (344)
T 4gqb_B 238 TVSLVDTKSTSCVLSSAVHS-QCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFV----RDATWSPLN 311 (344)
T ss_dssp EEEEEESCC--CCEEEECCS-SCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCE----EEEEECSSS
T ss_pred cEEEEECCCCcEEEEEcCCC-CCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCE----EEEEEeCCC
Confidence 99999999999999999887 789999999998 58999999999999999987654 345555443 457899998
Q ss_pred c-EEEEEeCCCcEEEEEccCceE
Q 017314 316 S-YVAAGSADGSVYIWSISKADI 337 (373)
Q Consensus 316 ~-~l~sgs~Dg~i~iwd~~~~~~ 337 (373)
. +|+|||.||+|++|++.+...
T Consensus 312 ~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 312 HSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp TTEEEEEETTSCEEEEECCC---
T ss_pred CeEEEEEcCCCeEEEEECCCCCC
Confidence 6 677999999999999987543
No 34
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.8e-43 Score=327.64 Aligned_cols=282 Identities=19% Similarity=0.303 Sum_probs=241.5
Q ss_pred cCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCee
Q 017314 85 NAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRV 164 (373)
Q Consensus 85 ~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 164 (373)
..| ..+....|++++++|++|+.|+.|++||+.++.....+.+|.+.|.+++|+|++++|++++.|++|++||+.+++.
T Consensus 95 ~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 173 (420)
T 3vl1_A 95 KRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSN 173 (420)
T ss_dssp CSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCC
T ss_pred ecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcC
Confidence 344 4455567899999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred EEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-------------------------CceeE
Q 017314 165 RHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-------------------------SNCNA 219 (373)
Q Consensus 165 ~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-------------------------~~~~~ 219 (373)
...+.+|...|.+++|+| ++.++++++.|++|++||++++.++..+..+ ..+.+
T Consensus 174 ~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~ 252 (420)
T 3vl1_A 174 PRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNN 252 (420)
T ss_dssp CEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCT
T ss_pred ceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccc
Confidence 999999999999999998 6789999999999999999999888877643 22334
Q ss_pred EEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCC-EEEEeeCCCeEEEEEccccce-eeeeee
Q 017314 220 LAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGN-IILTSGRDNLHNLFDIRSLEV-CGSLRA 297 (373)
Q Consensus 220 ~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~~-~~~~~~ 297 (373)
++|+|++++|++|+.||.|++||+++++.+..+...+...|++++|+|+++ +|++++.|+.+++||+++.+. ...+..
T Consensus 253 ~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~ 332 (420)
T 3vl1_A 253 LEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLI 332 (420)
T ss_dssp TCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEE
T ss_pred eEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhc
Confidence 556789999999999999999999999888877665557899999999999 999999999999999998653 555554
Q ss_pred c-CCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCc---------eEEEEeccCCccEEEEEEcCCCC---cEEEEe
Q 017314 298 T-GNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKA---------DIVRTLKEHTAPVLSCSWSGLGK---PLASAD 364 (373)
Q Consensus 298 ~-~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~---------~~~~~l~~h~~~V~~~~~s~~g~---~l~s~s 364 (373)
+ ...+. ..+.|++.+|++|+.||.|++|++... .....+.+|.+.|.+++|+|+++ .|++++
T Consensus 333 ~~~~~v~-----~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g 407 (420)
T 3vl1_A 333 NEGTPIN-----NVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVG 407 (420)
T ss_dssp STTSCEE-----EEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEE
T ss_pred cCCCCce-----EEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEc
Confidence 3 32222 234568899999999999999998763 22234567889999999999999 788889
Q ss_pred CCCeEEEcC
Q 017314 365 KNGVVCVWT 373 (373)
Q Consensus 365 ~dg~i~iW~ 373 (373)
.+|.+.+|+
T Consensus 408 ~~g~~~~~~ 416 (420)
T 3vl1_A 408 KNNFCALYN 416 (420)
T ss_dssp TTTEEEEEE
T ss_pred CCceEEEEe
Confidence 999999994
No 35
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=5.3e-43 Score=318.83 Aligned_cols=283 Identities=14% Similarity=0.200 Sum_probs=244.1
Q ss_pred ecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc--eeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 017314 84 INAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGS--LSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNS 161 (373)
Q Consensus 84 ~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 161 (373)
+..|.++|++++|+|++++|++|+.|+.|++||+.+++ ....+.+|...|.+++|+|++++|++++.|+.|++||+.+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEET
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCC
Confidence 34589999999999999999999999999999999887 7888899999999999999999999999999999999998
Q ss_pred CeeEE--EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCee---eeEEe--ecCceeEEEEccCCCEEEEEeC
Q 017314 162 GRVRH--TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYC---VNTII--FHSNCNALAFSMDGQTIFSGHI 234 (373)
Q Consensus 162 ~~~~~--~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~---~~~~~--~~~~~~~~~~~~~g~~l~sg~~ 234 (373)
++... .+..|...|.+++|++ +++++++++.|+.|++||+..+.. ...+. +...+.+++|+|++.+|++|+.
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CeeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 87544 3467999999999998 578999999999999999987752 22221 2345899999999999999999
Q ss_pred CCcEEEEEC------------------CCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeee
Q 017314 235 DGNLRLWDI------------------QTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLR 296 (373)
Q Consensus 235 dg~i~iwd~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~ 296 (373)
||.|++||+ ..++.+..+..|. ..+.+++|+|++++|++++.|+.+++||+++.+....+.
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC-GWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS-SCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCC-CeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 999999995 4677777777765 789999999999999999999999999999988888887
Q ss_pred ecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccC--ceE--------------------------------E----
Q 017314 297 ATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISK--ADI--------------------------------V---- 338 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~--~~~--------------------------------~---- 338 (373)
.+...+ ..++++|++.+|++| .||.|++|++.. +.. .
T Consensus 242 ~~~~~v----~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (372)
T 1k8k_C 242 SETLPL----LAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAA 316 (372)
T ss_dssp CSSCCE----EEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-------
T ss_pred cCCCCe----EEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCcc
Confidence 665443 347889999999988 899999999987 421 0
Q ss_pred --EEe-ccCCccEEEEEEc-CCC---CcEEEEeCCCeEEEcC
Q 017314 339 --RTL-KEHTAPVLSCSWS-GLG---KPLASADKNGVVCVWT 373 (373)
Q Consensus 339 --~~l-~~h~~~V~~~~~s-~~g---~~l~s~s~dg~i~iW~ 373 (373)
..+ .+|..+|++++|+ ++| ++|+|++.||.|++|+
T Consensus 317 ~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 317 AGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp --CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred ccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 233 4899999999966 677 9999999999999995
No 36
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.9e-42 Score=309.60 Aligned_cols=277 Identities=23% Similarity=0.329 Sum_probs=233.3
Q ss_pred HHhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccc
Q 017314 51 KLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCL 130 (373)
Q Consensus 51 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 130 (373)
.+++.+.|+.++.|+..... .....+...+.+|...|.+++|++++.+|++|+.|++|++||+.+++....+.+|.
T Consensus 32 ~l~s~s~D~~v~~W~~~~~~----~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~ 107 (319)
T 3frx_A 32 LLLSASRDKTLISWKLTGDD----QKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHK 107 (319)
T ss_dssp EEEEEETTSEEEEEEEEEET----TEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEEecCCccEEEecCCCCC----ccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCC
Confidence 46777888888888643210 11123456789999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeC-----CCCEEEEEeCCCcEEEEEccCC
Q 017314 131 GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKI-----SSRHVVSAAYDRTLKVWDLHKG 205 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-----~~~~~~s~s~D~~i~vwd~~~~ 205 (373)
..|.+++|+|++.+|++++.|++|++||++ ++++..+.+|...|.++.+.|. +...+++++.|++|++||++++
T Consensus 108 ~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 186 (319)
T 3frx_A 108 SDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF 186 (319)
T ss_dssp SCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc
Confidence 999999999999999999999999999996 5677888999999999999874 2347999999999999999998
Q ss_pred eeeeEEeec-CceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEE
Q 017314 206 YCVNTIIFH-SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLF 284 (373)
Q Consensus 206 ~~~~~~~~~-~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~ 284 (373)
.....+..| ..+.+++|+|+|++|++|+.||+|++||+.+++.+..+..+ ..|.+++|+|++.+|++++.+ .+++|
T Consensus 187 ~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp~~~~la~~~~~-~i~v~ 263 (319)
T 3frx_A 187 QIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ--DEVFSLAFSPNRYWLAAATAT-GIKVF 263 (319)
T ss_dssp EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC--SCEEEEEECSSSSEEEEEETT-EEEEE
T ss_pred hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC--CcEEEEEEcCCCCEEEEEcCC-CcEEE
Confidence 887777665 45899999999999999999999999999999998888765 579999999999999888755 58999
Q ss_pred EccccceeeeeeecCC----eeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCc
Q 017314 285 DIRSLEVCGSLRATGN----RVASNWSRSCISPDESYVAAGSADGSVYIWSISKA 335 (373)
Q Consensus 285 d~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~ 335 (373)
++........+..... ........++|+|||++|++|+.||.|+|||+.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 264 SLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEEEC
T ss_pred EeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEeec
Confidence 9987665555432211 11122345789999999999999999999998764
No 37
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.8e-42 Score=311.19 Aligned_cols=246 Identities=27% Similarity=0.454 Sum_probs=220.9
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC----ceeeeccccccceEEEEEcCCCCEEEEEeCCCcEE
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTG----SLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLY 155 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 155 (373)
+.+.+..|...|.+++|+|++++|++|+.|+.|++||+.++ .....+.+|.+.|.++.|++++. +++++.|++|+
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~ 167 (340)
T 1got_B 89 KVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCA 167 (340)
T ss_dssp EEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEE
T ss_pred cceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEE
Confidence 45678889999999999999999999999999999999875 34566789999999999998764 89999999999
Q ss_pred EEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEEeC
Q 017314 156 VWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGHI 234 (373)
Q Consensus 156 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~~ 234 (373)
+||+.+++++..+.+|...|.+++|+| ++.++++|+.|++|++||++++.+..++..|. .+++++|+|++.+|++|+.
T Consensus 168 ~wd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 168 LWDIETGQQTTTFTGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEECCCCcEEEEEcCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcC
Confidence 999999999999999999999999998 67899999999999999999999888887664 5899999999999999999
Q ss_pred CCcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECC
Q 017314 235 DGNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISP 313 (373)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 313 (373)
||+|++||+++++.+..+..+. ...|++++|+|++++|++++.|+.+++||+.+.+....+..|...+. .++|+|
T Consensus 247 d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~----~~~~s~ 322 (340)
T 1got_B 247 DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVS----CLGVTD 322 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE----EEEECT
T ss_pred CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEE----EEEEcC
Confidence 9999999999988777664322 24699999999999999999999999999999888888877766554 478999
Q ss_pred CCcEEEEEeCCCcEEEEE
Q 017314 314 DESYVAAGSADGSVYIWS 331 (373)
Q Consensus 314 ~~~~l~sgs~Dg~i~iwd 331 (373)
+|.+|++|+.||+|+|||
T Consensus 323 dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 323 DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEcCCccEEecC
Confidence 999999999999999996
No 38
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-44 Score=330.98 Aligned_cols=283 Identities=16% Similarity=0.256 Sum_probs=247.2
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCC----CceeeeccccccceEEEEEcCC-CCEEEEEeCCCcEEEEEcC
Q 017314 86 AHEGGCASILFEYNSARLISGGQDKSIKLWDTNT----GSLSSTLYGCLGSVLDLAITHD-NRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~~ 160 (373)
.|...|++++|+|++.+|++|+.|+.|++||+.+ ......+.+|...|.+++|+|+ +++|++++.|++|++||+.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~ 144 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMN 144 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTT
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECC
Confidence 5889999999999999999999999999999987 3577888999999999999998 8999999999999999999
Q ss_pred CCe------eEE---EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-------CceeEEEEcc
Q 017314 161 SGR------VRH---TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-------SNCNALAFSM 224 (373)
Q Consensus 161 ~~~------~~~---~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-------~~~~~~~~~~ 224 (373)
+++ ... .+.+|...|.+++|++..+.++++++.|++|++||++++.++..+..+ ..+.+++|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 145 KCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp TTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred CCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 876 332 346899999999999865789999999999999999999988887664 4589999999
Q ss_pred CC-CEEEEEeCCC---cEEEEECCCC-eeeEEEe-cccccceEEEEEcC-CCCEEEEeeCCCeEEEEEccccceeeeeee
Q 017314 225 DG-QTIFSGHIDG---NLRLWDIQTG-KLLSEVA-AHSLAAVTSISLSR-SGNIILTSGRDNLHNLFDIRSLEVCGSLRA 297 (373)
Q Consensus 225 ~g-~~l~sg~~dg---~i~iwd~~~~-~~~~~~~-~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~ 297 (373)
++ .++++++.|+ .|++||++++ ..+..+. .|. ..|.+++|+| ++++|++++.|+.+++||+++.+....+..
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQ-KGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCS-SCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCcc-CceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 97 6899999999 9999999986 5666666 565 7899999999 999999999999999999999988888877
Q ss_pred cCCeeecCeeeeEECCCC-cEEEEEeCCCcEEEEEccCceEEEEe-----------------------------------
Q 017314 298 TGNRVASNWSRSCISPDE-SYVAAGSADGSVYIWSISKADIVRTL----------------------------------- 341 (373)
Q Consensus 298 ~~~~~~~~~~~~~~s~~~-~~l~sgs~Dg~i~iwd~~~~~~~~~l----------------------------------- 341 (373)
+...+. .++++|++ .+|++|+.||.|++|++.++......
T Consensus 304 ~~~~v~----~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (416)
T 2pm9_A 304 RGNWCF----KTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAP 379 (416)
T ss_dssp SSSCCC----CEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCC
T ss_pred CCCceE----EEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCC
Confidence 665543 47899999 89999999999999999876532221
Q ss_pred ccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 342 KEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 342 ~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
..|..+|.+++|||+|++|++++.||.|+||+
T Consensus 380 ~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~ 411 (416)
T 2pm9_A 380 TWYGEPSPAAHWAFGGKLVQITPDGKGVSITN 411 (416)
T ss_dssp STTCCCSCCCEEETTTEEECBCTTSSCBCCBC
T ss_pred ccccCCccceEEeeCCeEEEEeCCCCeEEEEE
Confidence 11677888999999999999999999999996
No 39
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.6e-43 Score=326.93 Aligned_cols=289 Identities=16% Similarity=0.243 Sum_probs=229.8
Q ss_pred eEEecCccCcEEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCce--eeeccccccceEEEEEcC-CCCEEEEEeCCCcEEE
Q 017314 81 KHKINAHEGGCASILFEY-NSARLISGGQDKSIKLWDTNTGSL--SSTLYGCLGSVLDLAITH-DNRSVIAASSSNNLYV 156 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~i 156 (373)
.....+|...|++++|+| ++++||+|+.||+|+|||+.++.. ...+.+|.+.|++++|+| ++++|++++.|++|++
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 345667999999999998 567999999999999999987654 445678999999999998 6889999999999999
Q ss_pred EEcCCCeeEEEeecC--CCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCC-EEEEE
Q 017314 157 WDVNSGRVRHTLTGH--TDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQ-TIFSG 232 (373)
Q Consensus 157 wd~~~~~~~~~~~~h--~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~-~l~sg 232 (373)
||++++........| ...+.++++++ ++.++++|+.||+|++||++.. .+..+..| ..+.+++|+|++. ++++|
T Consensus 192 wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~ 269 (435)
T 4e54_B 192 QDFKGNILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATA 269 (435)
T ss_dssp EETTSCEEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEE
T ss_pred eeccCCceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccCcc-eeEEEecccceEEeeeecCCCceEEEEe
Confidence 999877654444433 34567888987 6789999999999999999654 44444444 4589999999876 67899
Q ss_pred eCCCcEEEEECCCCeeeEEE---ecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeec--Cee
Q 017314 233 HIDGNLRLWDIQTGKLLSEV---AAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVAS--NWS 307 (373)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~ 307 (373)
+.|++|++||+++++....+ ..|. ..|++++|+|++++|++++.|+.|++||+++++....+..+...... ...
T Consensus 270 s~d~~v~iwd~~~~~~~~~~~~~~~h~-~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 348 (435)
T 4e54_B 270 SVDQTVKIWDLRQVRGKASFLYSLPHR-HPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPI 348 (435)
T ss_dssp ETTSBCCEEETTTCCSSSCCSBCCBCS-SCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCC
T ss_pred cCcceeeEEecccccccceEEEeeecc-ccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeE
Confidence 99999999999887654433 3444 78999999999999999999999999999988766655444322111 111
Q ss_pred eeEECCCCcEEEEEe------------CCCcEEEEEccCceEEEEec-cCCccEEEE-EEcCCCCcEEEEeCCCeEEEcC
Q 017314 308 RSCISPDESYVAAGS------------ADGSVYIWSISKADIVRTLK-EHTAPVLSC-SWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 308 ~~~~s~~~~~l~sgs------------~Dg~i~iwd~~~~~~~~~l~-~h~~~V~~~-~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
..+++|++.++++++ .++.|++||..+++.+..+. +|...|.++ +|||+|++||+|+ |+.|+||+
T Consensus 349 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~ 427 (435)
T 4e54_B 349 KAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWS 427 (435)
T ss_dssp BCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECC
T ss_pred EEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEE
Confidence 234666666666654 34679999999999988765 688889887 6999999999876 88999996
No 40
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-42 Score=319.68 Aligned_cols=279 Identities=16% Similarity=0.281 Sum_probs=245.1
Q ss_pred CccCcEEEEEEcCCCC-EEEEeeCCCcEEEEeC----CCCc------eeeeccc----------cccceEEEEEcCCCCE
Q 017314 86 AHEGGCASILFEYNSA-RLISGGQDKSIKLWDT----NTGS------LSSTLYG----------CLGSVLDLAITHDNRS 144 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~----~~~~------~~~~~~~----------~~~~v~~~~~~~~~~~ 144 (373)
.|.++|++++|+|++. +|++|+.|+.|++||+ .+++ ....+.. |.+.|.+++|+|++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 122 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNS 122 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCE
Confidence 4669999999999999 9999999999999999 8877 3444433 6779999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCc--------
Q 017314 145 VIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSN-------- 216 (373)
Q Consensus 145 l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~-------- 216 (373)
|++++.|+.|++|| .+++....+.+|...|.+++|+| ++.++++++.|+.|++||+.++..+..+..+..
T Consensus 123 l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 200 (425)
T 1r5m_A 123 IVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAE 200 (425)
T ss_dssp EEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC----------
T ss_pred EEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeec
Confidence 99999999999999 67788889999999999999988 678999999999999999999988877765543
Q ss_pred --------eeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q 017314 217 --------CNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRS 288 (373)
Q Consensus 217 --------~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~ 288 (373)
+.+++|+|++ .+++++.||.|++||+++++.+..+..|. ..|.+++|+|++++|++++.|+.+++||+++
T Consensus 201 ~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~ 278 (425)
T 1r5m_A 201 NHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHH-GPISVLEFNDTNKLLLSASDDGTLRIWHGGN 278 (425)
T ss_dssp -----CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCS-SCEEEEEEETTTTEEEEEETTSCEEEECSSS
T ss_pred cccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCC-CceEEEEECCCCCEEEEEcCCCEEEEEECCC
Confidence 7789999875 58899999999999999998888888776 7899999999999999999999999999998
Q ss_pred cceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCe
Q 017314 289 LEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGV 368 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~ 368 (373)
.+....+..+...+ ..++++|++ +|++++.||.|++||+.+++.+..+..|..+|.+++|+|+|++|++++.||.
T Consensus 279 ~~~~~~~~~~~~~i----~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~ 353 (425)
T 1r5m_A 279 GNSQNCFYGHSQSI----VSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQ 353 (425)
T ss_dssp BSCSEEECCCSSCE----EEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSC
T ss_pred CccceEecCCCccE----EEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCe
Confidence 88777776555443 347789999 9999999999999999999999999999999999999999999999999999
Q ss_pred EEEcC
Q 017314 369 VCVWT 373 (373)
Q Consensus 369 i~iW~ 373 (373)
|++|+
T Consensus 354 i~i~~ 358 (425)
T 1r5m_A 354 VNVYD 358 (425)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99995
No 41
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-44 Score=337.52 Aligned_cols=313 Identities=11% Similarity=0.074 Sum_probs=229.7
Q ss_pred HHHhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCC------CCEEEEeeCCCcEEEEeCCCCce-
Q 017314 50 EKLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYN------SARLISGGQDKSIKLWDTNTGSL- 122 (373)
Q Consensus 50 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~s~s~D~~v~iwd~~~~~~- 122 (373)
+.+++.+.|+.++.|+..... ........+.+|.+.|.+++|+|+ +.+||+|+.|++|+|||+.++..
T Consensus 174 ~~laS~s~D~tI~iWd~~~~~-----~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~ 248 (524)
T 2j04_B 174 EMFDKEKHSSCIQIFKMNTST-----LHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATD 248 (524)
T ss_dssp --------CEEEEEEEEETTT-----CCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSS
T ss_pred hhhccCCCCceEEEEEccCCC-----CCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccc
Confidence 456788899999998743211 111123456778899999999997 57999999999999999987642
Q ss_pred ----------eeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-eeEEEeecCCCcEEEEEE-eeCCC-CEEE
Q 017314 123 ----------SSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSG-RVRHTLTGHTDKVCAVDV-SKISS-RHVV 189 (373)
Q Consensus 123 ----------~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~-~~~~~-~~~~ 189 (373)
...+.+|...|.+++|+++ ..|++|+.|++|++||++++ .+...+.+|...|.++++ .+.++ .+|+
T Consensus 249 ~~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~la 327 (524)
T 2j04_B 249 VHVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVS 327 (524)
T ss_dssp SSEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEE
T ss_pred cccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEE
Confidence 2356789999999999986 48999999999999999876 455678999999999942 23344 7899
Q ss_pred EEeCCCcEEEEEccCCeeeeEEeecC---ceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEc
Q 017314 190 SAAYDRTLKVWDLHKGYCVNTIIFHS---NCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLS 266 (373)
Q Consensus 190 s~s~D~~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~ 266 (373)
|||.|++|+|||++++.+..++..+. .+.+++|+|++..+++++.|++|++||++++.++..+.+|. ..|++++|+
T Consensus 328 S~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~-~~V~sva~S 406 (524)
T 2j04_B 328 TVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRE-TTITAIGVS 406 (524)
T ss_dssp EEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECS-SCEEEEECC
T ss_pred EeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCC-CceEEEEeC
Confidence 99999999999999888776666554 36789999999999999999999999999998888888876 799999999
Q ss_pred CCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeec-CeeeeEECCCCcEEEEEeCCCcEEEEEcc-CceEEEEeccC
Q 017314 267 RSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVAS-NWSRSCISPDESYVAAGSADGSVYIWSIS-KADIVRTLKEH 344 (373)
Q Consensus 267 ~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~-~~~~~~~l~~h 344 (373)
|++++|++|+.|+++++||+... ....+......... ....++++|+|..+. ... .+++|+.. ++..+..+.+|
T Consensus 407 p~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~~--~~~~~~~~~~g~~~~~l~gh 482 (524)
T 2j04_B 407 RLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-IDS--SYEVYPLTVNDVSKAKIDAH 482 (524)
T ss_dssp SSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSSCEEE-ECC--CCCCCC-------------C
T ss_pred CCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCCCeEE-ccC--CceecccccCCcceeeecCC
Confidence 99999999999999999998643 11111110000000 112467899998552 222 34455443 46678889999
Q ss_pred CccEEEEEEcCCCC---cEEEEeCCCeEEEcC
Q 017314 345 TAPVLSCSWSGLGK---PLASADKNGVVCVWT 373 (373)
Q Consensus 345 ~~~V~~~~~s~~g~---~l~s~s~dg~i~iW~ 373 (373)
..+|.+|+|||+++ +||+|+.||.|+||+
T Consensus 483 ~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 483 GINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp CCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred CceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 99999999999964 999999999999994
No 42
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.5e-41 Score=315.25 Aligned_cols=287 Identities=22% Similarity=0.304 Sum_probs=237.5
Q ss_pred ccccceEEecCcc----CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeec--cccccceEEEEEcCCCCEEEEEe
Q 017314 76 VPSTCKHKINAHE----GGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTL--YGCLGSVLDLAITHDNRSVIAAS 149 (373)
Q Consensus 76 ~~~~~~~~~~~h~----~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~s 149 (373)
+|..+.+.|.+.. --+..|.||++ +.|++| .|++|+|||+.++++...+ .+|...|++++|+|+|++|++|+
T Consensus 89 i~~~p~~~l~ap~~~~d~y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs 166 (420)
T 4gga_A 89 IPSLPDRILDAPEIRNDYYLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT 166 (420)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE
T ss_pred cCCCCceEEECCCCcccccceeEEECCC-CEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE
Confidence 3444444554432 23567999975 466665 5999999999999877655 46778899999999999999999
Q ss_pred CCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCe-eeeEEeec-CceeEEEEccCCC
Q 017314 150 SSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGY-CVNTIIFH-SNCNALAFSMDGQ 227 (373)
Q Consensus 150 ~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~-~~~~~~~~-~~~~~~~~~~~g~ 227 (373)
.|++|+|||+.+++++..+.+|...+.++.++ +..+++|+.|+++++||..... .+.++..| ..+..+.++|+|.
T Consensus 167 ~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 167 SSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR 243 (420)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred CCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC---CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCC
Confidence 99999999999999999999999999998774 5689999999999999987643 44555555 4578899999999
Q ss_pred EEEEEeCCCcEEEEECCCCee----eEEEecccccceEEEEEcCCCC-EEEE--eeCCCeEEEEEccccceeeeeeecCC
Q 017314 228 TIFSGHIDGNLRLWDIQTGKL----LSEVAAHSLAAVTSISLSRSGN-IILT--SGRDNLHNLFDIRSLEVCGSLRATGN 300 (373)
Q Consensus 228 ~l~sg~~dg~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~s--~~~d~~i~~~d~~~~~~~~~~~~~~~ 300 (373)
++++++.|+.|++||..+++. +.....|. ..|.+++|+|.+. ++++ ++.|+.|++||++++.....+..+..
T Consensus 244 ~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~-~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~ 322 (420)
T 4gga_A 244 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ-GAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ 322 (420)
T ss_dssp EEEEEETTSCEEEEESSCCSSCSCCSEEECCCS-SCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSC
T ss_pred eeeeeeccccceEEeeccccccceeeeeecccC-CceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccc
Confidence 999999999999999987653 33444454 7899999999765 4444 45799999999999888777765543
Q ss_pred eeecCeeeeEECCCCcEEEEEe--CCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 301 RVASNWSRSCISPDESYVAAGS--ADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 301 ~~~~~~~~~~~s~~~~~l~sgs--~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
. ...+++|++..+++++ .||.|+|||+.+++++..+.+|.++|++++|||||++|||||.||+|+||+
T Consensus 323 v-----~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWd 392 (420)
T 4gga_A 323 V-----CSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 392 (420)
T ss_dssp E-----EEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred e-----eeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 3 2356889999888765 799999999999999999999999999999999999999999999999996
No 43
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.9e-42 Score=303.78 Aligned_cols=248 Identities=22% Similarity=0.332 Sum_probs=198.8
Q ss_pred EEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC--ceeeeccccccceEEEEEcCC--CCEEEEEeCCCcEEEE
Q 017314 82 HKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTG--SLSSTLYGCLGSVLDLAITHD--NRSVIAASSSNNLYVW 157 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~d~~i~iw 157 (373)
..+.+|.+.|++++|+|+|++|++|+.|++|+|||+.++ +...++.+|.++|.+++|+++ +++|++++.|++|++|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iW 82 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIW 82 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEE
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEE
Confidence 356789999999999999999999999999999999753 567889999999999999864 8899999999999999
Q ss_pred EcCCCe--eEEEeecCCCcEEEEEEeeCC-CCEEEEEeCCCcEEEEEccCCee--eeEEeec-CceeEEEEccC------
Q 017314 158 DVNSGR--VRHTLTGHTDKVCAVDVSKIS-SRHVVSAAYDRTLKVWDLHKGYC--VNTIIFH-SNCNALAFSMD------ 225 (373)
Q Consensus 158 d~~~~~--~~~~~~~h~~~v~~~~~~~~~-~~~~~s~s~D~~i~vwd~~~~~~--~~~~~~~-~~~~~~~~~~~------ 225 (373)
|+.+++ .+..+.+|...|.+++|+|.. +.++++|+.|++|++||++.+.. ...+..| ..+.+++|+|+
T Consensus 83 d~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (297)
T ss_dssp EBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-----
T ss_pred EcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccc
Confidence 998874 566788999999999999842 67999999999999999987632 2333334 45899999997
Q ss_pred -------CCEEEEEeCCCcEEEEECCCCe----eeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeee
Q 017314 226 -------GQTIFSGHIDGNLRLWDIQTGK----LLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGS 294 (373)
Q Consensus 226 -------g~~l~sg~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~ 294 (373)
+++|++|+.|++|++||+++++ ....+.+|. ..|.+++|+|++
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~-~~V~~v~~sp~~------------------------- 216 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWSPTV------------------------- 216 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS-SCEEEEEECCCC-------------------------
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCC-CceEEEEECCCC-------------------------
Confidence 5799999999999999998765 334444554 455555555542
Q ss_pred eeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCce---EEEEe--ccCCccEEEEEEcCCCCcEEEEeCCCeE
Q 017314 295 LRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKAD---IVRTL--KEHTAPVLSCSWSGLGKPLASADKNGVV 369 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~---~~~~l--~~h~~~V~~~~~s~~g~~l~s~s~dg~i 369 (373)
..+.+|++|+.||+|+|||+..+. ....+ .+|...|.+++|+|+|++||+++.||.|
T Consensus 217 ------------------~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v 278 (297)
T 2pm7_B 217 ------------------LLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV 278 (297)
T ss_dssp ------------------SSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCE
T ss_pred ------------------CCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcE
Confidence 013566777777777777765532 12233 4678899999999999999999999999
Q ss_pred EEcC
Q 017314 370 CVWT 373 (373)
Q Consensus 370 ~iW~ 373 (373)
+||+
T Consensus 279 ~lw~ 282 (297)
T 2pm7_B 279 TLWK 282 (297)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9994
No 44
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.7e-41 Score=299.34 Aligned_cols=287 Identities=21% Similarity=0.279 Sum_probs=232.3
Q ss_pred ccccceEEecCcc--C--cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeec--cccccceEEEEEcCCCCEEEEEe
Q 017314 76 VPSTCKHKINAHE--G--GCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTL--YGCLGSVLDLAITHDNRSVIAAS 149 (373)
Q Consensus 76 ~~~~~~~~~~~h~--~--~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~s 149 (373)
+|..+.+.|.+.. . .+..|+||+++ .|++ +.|++|+|||++++++...+ .+|...|.+++|+|++++|++|+
T Consensus 9 ~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAv-g~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs 86 (318)
T 4ggc_A 9 IPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAV-ALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT 86 (318)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEE-EETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE
T ss_pred cCCCCCEEeeCCCCcccccceEEEECCCC-EEEE-EeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE
Confidence 3444455554321 1 24678999875 6665 46999999999999887765 46778899999999999999999
Q ss_pred CCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCe-eeeEEeec-CceeEEEEccCCC
Q 017314 150 SSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGY-CVNTIIFH-SNCNALAFSMDGQ 227 (373)
Q Consensus 150 ~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~-~~~~~~~~-~~~~~~~~~~~g~ 227 (373)
.|++|++||+++++++..+.+|...+.++... +..+++++.++.+++|+...+. .+..+..| ..+..+.++++++
T Consensus 87 ~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~---~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (318)
T 4ggc_A 87 SSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR 163 (318)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred CCCcEEEeecCCceeEEEecCccceEEEeecC---CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC
Confidence 99999999999999999999999999877653 5689999999999999998764 33444444 4578899999999
Q ss_pred EEEEEeCCCcEEEEECCCCeee----EEEecccccceEEEEEcCCCCE---EEEeeCCCeEEEEEccccceeeeeeecCC
Q 017314 228 TIFSGHIDGNLRLWDIQTGKLL----SEVAAHSLAAVTSISLSRSGNI---ILTSGRDNLHNLFDIRSLEVCGSLRATGN 300 (373)
Q Consensus 228 ~l~sg~~dg~i~iwd~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~---l~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 300 (373)
++++++.||+|++||+++++.. .....+ ...|.++.++|++.. +++++.++.+++||.+.............
T Consensus 164 ~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~ 242 (318)
T 4ggc_A 164 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQH-QGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQ 242 (318)
T ss_dssp EEEEEETTSCEEEEESSCBTTBSCCSEEECCC-CSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSC
T ss_pred EEEEEecCcceeEEECCCCcccccceeeeccc-CCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceee
Confidence 9999999999999999886532 222333 367999999997763 34677889999999988766544433222
Q ss_pred eeecCeeeeEECCCCcEEEEEe--CCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 301 RVASNWSRSCISPDESYVAAGS--ADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 301 ~~~~~~~~~~~s~~~~~l~sgs--~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
....+++|++.++++++ .||.|+|||+.+++++.++.+|.++|++++|+|+|++|||||.||+|+||+
T Consensus 243 -----v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd 312 (318)
T 4ggc_A 243 -----VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWR 312 (318)
T ss_dssp -----EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEEC
T ss_pred -----eeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEE
Confidence 23467889888877654 799999999999999999999999999999999999999999999999996
No 45
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=311.27 Aligned_cols=292 Identities=20% Similarity=0.265 Sum_probs=242.7
Q ss_pred ceEEecCccCcEEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCceeeecc-------------ccccceEEEEEcC-CCCE
Q 017314 80 CKHKINAHEGGCASILFEY-NSARLISGGQDKSIKLWDTNTGSLSSTLY-------------GCLGSVLDLAITH-DNRS 144 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-------------~~~~~v~~~~~~~-~~~~ 144 (373)
....+.+|.++|++++|+| ++++|++|+.||+|++||+.++.....+. +|...|.+++|+| ++.+
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 114 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGM 114 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTC
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcE
Confidence 3556788999999999999 99999999999999999999876654442 5899999999999 7789
Q ss_pred EEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCC--CCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEE
Q 017314 145 VIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKIS--SRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALA 221 (373)
Q Consensus 145 l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~ 221 (373)
|++++.|+.|++||+.+++....+. +...+.++.+.+.. ..++++++.|+.|++||++++..+..+..| ..+.+++
T Consensus 115 l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~ 193 (408)
T 4a11_B 115 FTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVS 193 (408)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEE
T ss_pred EEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEE
Confidence 9999999999999999999888776 77889999988753 348999999999999999999888877755 4589999
Q ss_pred EccCCC-EEEEEeCCCcEEEEECCCCe-eeEEE---------------ecccccceEEEEEcCCCCEEEEeeCCCeEEEE
Q 017314 222 FSMDGQ-TIFSGHIDGNLRLWDIQTGK-LLSEV---------------AAHSLAAVTSISLSRSGNIILTSGRDNLHNLF 284 (373)
Q Consensus 222 ~~~~g~-~l~sg~~dg~i~iwd~~~~~-~~~~~---------------~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~ 284 (373)
|+|++. .+++|+.||.|++||++++. .+..+ ..|. ..|.+++|+|++++|++++.|+.+++|
T Consensus 194 ~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~vw 272 (408)
T 4a11_B 194 WSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHN-GKVNGLCFTSDGLHLLTVGTDNRMRLW 272 (408)
T ss_dssp ECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCS-SCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccccc-CceeEEEEcCCCCEEEEecCCCeEEEE
Confidence 999998 58899999999999998765 33333 2333 689999999999999999999999999
Q ss_pred EccccceeeeeeecCCeeec-CeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEE
Q 017314 285 DIRSLEVCGSLRATGNRVAS-NWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASA 363 (373)
Q Consensus 285 d~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~ 363 (373)
|+++.+....+......... ..........+..+++++.|+.|++||+.+++++..+.+|.++|++++|+|++++|+++
T Consensus 273 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~ 352 (408)
T 4a11_B 273 NSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSG 352 (408)
T ss_dssp ETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred ECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEE
Confidence 99987654433222111111 11112223445677778889999999999999999999999999999999999999999
Q ss_pred eCCCeEEEcC
Q 017314 364 DKNGVVCVWT 373 (373)
Q Consensus 364 s~dg~i~iW~ 373 (373)
+.||.|++|+
T Consensus 353 ~~dg~i~iw~ 362 (408)
T 4a11_B 353 SRDCNILAWV 362 (408)
T ss_dssp ETTSCEEEEE
T ss_pred CCCCeEEEEe
Confidence 9999999995
No 46
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.8e-43 Score=318.17 Aligned_cols=278 Identities=12% Similarity=0.114 Sum_probs=217.4
Q ss_pred cCcEEEEEEcCCCCEEEEeeCCC-------cEEEEeCCCCce----------eeeccccccceEEEEEcCCCCEEEEE--
Q 017314 88 EGGCASILFEYNSARLISGGQDK-------SIKLWDTNTGSL----------SSTLYGCLGSVLDLAITHDNRSVIAA-- 148 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~D~-------~v~iwd~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~l~s~-- 148 (373)
..||++++|+||+++|++||.|. .|++|++..+.. ...+.+|...|.+++++ ++.++++
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 35899999999999999998654 599999876532 12356777788877664 5566665
Q ss_pred ---------eCCCcEEEEEcCCCee----EEEe-----ecCCCcEEEEEEeeCCCCEEE--EEeCCCcEEEEEccCCeee
Q 017314 149 ---------SSSNNLYVWDVNSGRV----RHTL-----TGHTDKVCAVDVSKISSRHVV--SAAYDRTLKVWDLHKGYCV 208 (373)
Q Consensus 149 ---------s~d~~i~iwd~~~~~~----~~~~-----~~h~~~v~~~~~~~~~~~~~~--s~s~D~~i~vwd~~~~~~~ 208 (373)
+.|+++|+|++.+... .... ..+...+.+++|+| ++++++ +++.|++|++||+.++.++
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 4578899999865432 1111 23445688999998 566655 4557999999999999999
Q ss_pred eEEeecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEE-ecccccceEEEEEcCCCCEEEEeeCCC----eEEE
Q 017314 209 NTIIFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEV-AAHSLAAVTSISLSRSGNIILTSGRDN----LHNL 283 (373)
Q Consensus 209 ~~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~~~d~----~i~~ 283 (373)
..+.++..+.+++|+|||+++++++.| .+++|+..+++.+... ...+...|.+++|+|+++++++++.|+ .+++
T Consensus 171 ~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~ 249 (365)
T 4h5i_A 171 FEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTK 249 (365)
T ss_dssp EEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEE
T ss_pred EEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEee
Confidence 888877889999999999999999855 5677777777655433 222347899999999999999999887 6788
Q ss_pred EEcccccee----eeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEe-ccCCccEEEEEEcCCCC
Q 017314 284 FDIRSLEVC----GSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTL-KEHTAPVLSCSWSGLGK 358 (373)
Q Consensus 284 ~d~~~~~~~----~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l-~~h~~~V~~~~~s~~g~ 358 (373)
|++...... ..+..+... +..++|+|||++||+|+.|++|+|||+.+++++..+ .+|..+|++++|||||+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~----V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 250 ISIKSGNTSVLRSKQVTNRFKG----ITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST 325 (365)
T ss_dssp EEEETTEEEEEEEEEEESSCSC----EEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC
T ss_pred cccccceecceeeeeecCCCCC----eEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC
Confidence 888755432 223333333 345789999999999999999999999999999874 78999999999999999
Q ss_pred cEEEEeCCCeEEEcC
Q 017314 359 PLASADKNGVVCVWT 373 (373)
Q Consensus 359 ~l~s~s~dg~i~iW~ 373 (373)
+|||||.|++||||+
T Consensus 326 ~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 326 YVASVSAANTIHIIK 340 (365)
T ss_dssp EEEEEETTSEEEEEE
T ss_pred EEEEEeCCCeEEEEE
Confidence 999999999999995
No 47
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.6e-42 Score=314.62 Aligned_cols=281 Identities=19% Similarity=0.302 Sum_probs=240.8
Q ss_pred ecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccc-cccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 017314 84 INAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYG-CLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSG 162 (373)
Q Consensus 84 ~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 162 (373)
..+|...+...++++++..+++++.|++|++||+.+++....+.. |...|.+++|+|++.+|++++.|+.|++||+.++
T Consensus 87 ~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~ 166 (401)
T 4aez_A 87 APGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQ 166 (401)
T ss_dssp CTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred CCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCC
Confidence 346766655444454557799999999999999999988776665 7889999999999999999999999999999999
Q ss_pred eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEcc-CCeeeeEEeec-CceeEEEEccCCCEEEEEeCCCcEEE
Q 017314 163 RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLH-KGYCVNTIIFH-SNCNALAFSMDGQTIFSGHIDGNLRL 240 (373)
Q Consensus 163 ~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~-~~~~~~~~~~~-~~~~~~~~~~~g~~l~sg~~dg~i~i 240 (373)
+.+..+.+|...|.+++|+ ++.+++|+.|++|++||++ .+.....+..| ..+.+++|+|++.+|++|+.||.|++
T Consensus 167 ~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~i 243 (401)
T 4aez_A 167 TKLRTMAGHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQI 243 (401)
T ss_dssp CEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEEEecCCCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEE
Confidence 9999999999999999984 4699999999999999998 45555566555 45899999999999999999999999
Q ss_pred EECCCCeeeEEEecccccceEEEEEcCCCC-EEEEee--CCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcE
Q 017314 241 WDIQTGKLLSEVAAHSLAAVTSISLSRSGN-IILTSG--RDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESY 317 (373)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 317 (373)
||+++++.+..+..|. ..|.+++|+|++. ++++++ .|+.+++||+++.+....+.... ....++++|++.+
T Consensus 244 wd~~~~~~~~~~~~~~-~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~~~~-----~v~~~~~s~~~~~ 317 (401)
T 4aez_A 244 WDARSSIPKFTKTNHN-AAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVDAGS-----QVTSLIWSPHSKE 317 (401)
T ss_dssp EETTCSSEEEEECCCS-SCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEECSS-----CEEEEEECSSSSE
T ss_pred ccCCCCCccEEecCCc-ceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEeCCC-----cEEEEEECCCCCe
Confidence 9999999888887776 7899999999775 566654 79999999999988777765332 2345789999999
Q ss_pred EEE--EeCCCcEEEEEccCceEEE--EeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 318 VAA--GSADGSVYIWSISKADIVR--TLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 318 l~s--gs~Dg~i~iwd~~~~~~~~--~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
|++ |+.||.|++|++.++.... .+.+|...|.+++|+|+|++|++++.||.|++|+
T Consensus 318 l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 318 IMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp EEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred EEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 999 5589999999999976544 4678999999999999999999999999999995
No 48
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-43 Score=325.39 Aligned_cols=281 Identities=16% Similarity=0.224 Sum_probs=242.8
Q ss_pred CcEEEEEEcCCCC-EEEEe----------eCCCcEEEEeCCCCce--eeeccccccceEEEEEcCCCCEEEEEeCCCcEE
Q 017314 89 GGCASILFEYNSA-RLISG----------GQDKSIKLWDTNTGSL--SSTLYGCLGSVLDLAITHDNRSVIAASSSNNLY 155 (373)
Q Consensus 89 ~~v~~~~~~~~~~-~l~s~----------s~D~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 155 (373)
..|.+++|+|++. +|++| +.|++|++||+.++.. ......|...|.+++|+|++.+|++++.|+.|+
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEE
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEE
Confidence 4677899999987 99999 8999999999998753 222235888999999999999999999999999
Q ss_pred EEEcCC----CeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCe------eeeEE---e-ecCceeEEE
Q 017314 156 VWDVNS----GRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGY------CVNTI---I-FHSNCNALA 221 (373)
Q Consensus 156 iwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~------~~~~~---~-~~~~~~~~~ 221 (373)
+||+.+ .+....+.+|...|.+++|+|..+.++++++.|++|++||+.++. ..... . +...+.+++
T Consensus 93 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 172 (416)
T 2pm9_A 93 LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLA 172 (416)
T ss_dssp EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEE
T ss_pred EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEE
Confidence 999987 458889999999999999998657899999999999999998875 22222 2 234589999
Q ss_pred EccC-CCEEEEEeCCCcEEEEECCCCeeeEEEeccc-----ccceEEEEEcCCC-CEEEEeeCCC---eEEEEEcccc-c
Q 017314 222 FSMD-GQTIFSGHIDGNLRLWDIQTGKLLSEVAAHS-----LAAVTSISLSRSG-NIILTSGRDN---LHNLFDIRSL-E 290 (373)
Q Consensus 222 ~~~~-g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-----~~~v~~~~~~~~~-~~l~s~~~d~---~i~~~d~~~~-~ 290 (373)
|+|+ +.+|++|+.||.|++||+++++.+..+..+. ...+.+++|+|++ .++++++.|+ .+++||+++. .
T Consensus 173 ~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~ 252 (416)
T 2pm9_A 173 WNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT 252 (416)
T ss_dssp ECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS
T ss_pred eCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC
Confidence 9999 7899999999999999999999988887763 4789999999997 6899999998 9999999986 4
Q ss_pred eeeeee-ecCCeeecCeeeeEECC-CCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCC-CcEEEEeCCC
Q 017314 291 VCGSLR-ATGNRVASNWSRSCISP-DESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLG-KPLASADKNG 367 (373)
Q Consensus 291 ~~~~~~-~~~~~~~~~~~~~~~s~-~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g-~~l~s~s~dg 367 (373)
....+. .+... ...++++| ++.+|++|+.||.|++||+.+++++..+.+|..+|.+++|+|++ ++|++++.||
T Consensus 253 ~~~~~~~~~~~~----v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~ 328 (416)
T 2pm9_A 253 PLQTLNQGHQKG----ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDN 328 (416)
T ss_dssp CSBCCCSCCSSC----EEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSS
T ss_pred CcEEeecCccCc----eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCC
Confidence 444554 44433 34578999 99999999999999999999999999999999999999999999 8999999999
Q ss_pred eEEEcC
Q 017314 368 VVCVWT 373 (373)
Q Consensus 368 ~i~iW~ 373 (373)
.|+||+
T Consensus 329 ~i~iw~ 334 (416)
T 2pm9_A 329 KIEVQT 334 (416)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 999995
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.3e-43 Score=324.03 Aligned_cols=281 Identities=13% Similarity=0.143 Sum_probs=226.4
Q ss_pred cCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC--ceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 017314 85 NAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTG--SLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSG 162 (373)
Q Consensus 85 ~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 162 (373)
..|.++|++++|+|++++|++|+.|++|++||+.++ +....+.+|.+.|.+++|+|++++|++++.|++|++||+.++
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC-----
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCC
Confidence 446789999999999999999999999999999988 778889999999999999999999999999999999999987
Q ss_pred e---eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCe---eeeEEee--cCceeEEEEccCCCEEEEEeC
Q 017314 163 R---VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGY---CVNTIIF--HSNCNALAFSMDGQTIFSGHI 234 (373)
Q Consensus 163 ~---~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~---~~~~~~~--~~~~~~~~~~~~g~~l~sg~~ 234 (373)
+ ....+.+|...|.+++|+| +++++++|+.|++|++||++.+. +...+.. ...+.+++|+|++++|++|+.
T Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 88 GTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp -CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 7 6778889999999999998 67889999999999999998876 3555553 456999999999999999999
Q ss_pred CCcEEEEECC------------------CCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce----e
Q 017314 235 DGNLRLWDIQ------------------TGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV----C 292 (373)
Q Consensus 235 dg~i~iwd~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~----~ 292 (373)
||.|++||+. .++.+..+ .|. ..|++++|+|++++|++++.|+.+++||+++.+. .
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSG-GWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCS-SSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCC-ceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 9999999985 34455555 554 7899999999999999999999999999998876 5
Q ss_pred eeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCce------------------------------------
Q 017314 293 GSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKAD------------------------------------ 336 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~------------------------------------ 336 (373)
..+..+...+ ..++|+|++++|++|+.|+.+ +|+.....
T Consensus 245 ~~~~~~~~~v----~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (377)
T 3dwl_C 245 ITVKLSQLPL----RSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTA 319 (377)
T ss_dssp CCEECSSSCE----EEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC--------
T ss_pred EeecCCCCce----EEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccc
Confidence 6666655443 347899999999999877766 66654211
Q ss_pred ---EEEE-------------eccCCccEEEEEEcCCCC----cEEEEeCCCeEEEcC
Q 017314 337 ---IVRT-------------LKEHTAPVLSCSWSGLGK----PLASADKNGVVCVWT 373 (373)
Q Consensus 337 ---~~~~-------------l~~h~~~V~~~~~s~~g~----~l~s~s~dg~i~iW~ 373 (373)
.... ...|...|+++++.+.+. .|+|+|.||.|+||+
T Consensus 320 ~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWd 376 (377)
T 3dwl_C 320 LRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWT 376 (377)
T ss_dssp -----------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEEC
T ss_pred ccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEec
Confidence 0000 112999999999766543 599999999999996
No 50
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.5e-41 Score=308.07 Aligned_cols=249 Identities=22% Similarity=0.386 Sum_probs=221.4
Q ss_pred cceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC------ceeeeccccccceEEEEEcCCCCEEEEEeCCC
Q 017314 79 TCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTG------SLSSTLYGCLGSVLDLAITHDNRSVIAASSSN 152 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~ 152 (373)
...+.+..|...|.+++|+|++..|++|+.|+.+++|++... .....+.+|.+.|.+++|+|++..|++++.|+
T Consensus 97 ~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~ 176 (354)
T 2pbi_B 97 NKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDG 176 (354)
T ss_dssp CEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTS
T ss_pred CcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCC
Confidence 455677889999999999999999999999999999998643 23456778999999999999999999999999
Q ss_pred cEEEEEcCCCeeEEEeecCCCcEEEEEEeeC-CCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEE
Q 017314 153 NLYVWDVNSGRVRHTLTGHTDKVCAVDVSKI-SSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIF 230 (373)
Q Consensus 153 ~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~ 230 (373)
+|++||+++++++..+.+|...|.+++++|. +++++++|+.|++|++||++++.++..+..|. .+++++|+|++.+|+
T Consensus 177 ~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 256 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFA 256 (354)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred cEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEE
Confidence 9999999999999999999999999999874 35799999999999999999999988887664 599999999999999
Q ss_pred EEeCCCcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeee
Q 017314 231 SGHIDGNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRS 309 (373)
Q Consensus 231 sg~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 309 (373)
+|+.|++|++||+++++.+..+..+. ...+++++|+|++++|++++.|+.+++||+.+.+....+..|...+ ..+
T Consensus 257 s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v----~~l 332 (354)
T 2pbi_B 257 SGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRV----STL 332 (354)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCE----EEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcE----EEE
Confidence 99999999999999988776665432 2468999999999999999999999999999888887777766554 347
Q ss_pred EECCCCcEEEEEeCCCcEEEEE
Q 017314 310 CISPDESYVAAGSADGSVYIWS 331 (373)
Q Consensus 310 ~~s~~~~~l~sgs~Dg~i~iwd 331 (373)
+|+|+|.+|++|+.||+|+||+
T Consensus 333 ~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 333 RVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECTTSSCEEEEETTSEEEEEC
T ss_pred EECCCCCEEEEEcCCCCEEecC
Confidence 8999999999999999999995
No 51
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.9e-41 Score=317.09 Aligned_cols=281 Identities=21% Similarity=0.366 Sum_probs=242.2
Q ss_pred ceEEecCccCcE-EEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 017314 80 CKHKINAHEGGC-ASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWD 158 (373)
Q Consensus 80 ~~~~~~~h~~~v-~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd 158 (373)
....+.+|.+.+ .++.| ++++|++|+.|++|++||+.+++....+.+|.+.|.+++|++++ .+++|+.|++|++||
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 456788999885 55555 57899999999999999999999999999999999999999988 999999999999999
Q ss_pred cCCCeeEEEeecCCCcEEEEEEee-CCCCEEEEEeCCCcEEEEEccCCeeee-----------------------EEeec
Q 017314 159 VNSGRVRHTLTGHTDKVCAVDVSK-ISSRHVVSAAYDRTLKVWDLHKGYCVN-----------------------TIIFH 214 (373)
Q Consensus 159 ~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~~~s~s~D~~i~vwd~~~~~~~~-----------------------~~~~~ 214 (373)
+.+++....+.+|...|.++++++ .++.++++|+.|++|++||+.++.... .+..|
T Consensus 190 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 190 IKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp TTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred CCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 999999999999999999999986 356789999999999999998765321 22222
Q ss_pred CceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeee
Q 017314 215 SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGS 294 (373)
Q Consensus 215 ~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~ 294 (373)
. ....++++++.++++|+.||.|++||+++++.+..+..|. ..|.+++|+|+++++++++.|+.+++||+++.+....
T Consensus 270 ~-~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~ 347 (464)
T 3v7d_B 270 M-ASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT-DRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT 347 (464)
T ss_dssp S-SCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE
T ss_pred c-ceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE
Confidence 2 2234457889999999999999999999999999998876 7899999999999999999999999999999988888
Q ss_pred eeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 295 LRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+..+...+. .+++ ++.+|++|+.||.|++||+.++.....+ .|...+..++|+|++++|++++ ||.|++|+
T Consensus 348 ~~~h~~~v~----~~~~--~~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd 418 (464)
T 3v7d_B 348 LQGHTALVG----LLRL--SDKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIYN 418 (464)
T ss_dssp ECCCSSCEE----EEEE--CSSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEEE
T ss_pred EeCCCCcEE----EEEE--cCCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEEE
Confidence 877665543 2344 4789999999999999999988766555 3666788899999999999998 99999995
No 52
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.1e-41 Score=339.26 Aligned_cols=288 Identities=17% Similarity=0.240 Sum_probs=258.9
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDV 159 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 159 (373)
..+.+.+|.+.|++++|+|++.+|++|+.||+|+|||+.++.....+.+|.++|.+++|+|++++|++++.|+.|++||+
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCC-eeeeEEeec-CceeEEEEcc-CCCEEEEEeCCC
Q 017314 160 NSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKG-YCVNTIIFH-SNCNALAFSM-DGQTIFSGHIDG 236 (373)
Q Consensus 160 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~-~~~~~~~~~-~~~~~~~~~~-~g~~l~sg~~dg 236 (373)
.+++....+.+|.+.|.+++|+| ++.++++++.|++|++||+.++ .....+..| ..+.+++|+| ++..+++|+.||
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg 163 (814)
T 3mkq_A 85 NTGEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (814)
T ss_dssp TTCCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTS
T ss_pred CCCcEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCC
Confidence 99999999999999999999998 5778999999999999999987 555555544 4589999999 899999999999
Q ss_pred cEEEEECCCCeeeEEEecccccceEEEEEcC--CCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCC
Q 017314 237 NLRLWDIQTGKLLSEVAAHSLAAVTSISLSR--SGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPD 314 (373)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 314 (373)
.|++||+.++.....+..+....+.+++|+| ++.+|++++.|+.+++||+++.+....+..+...+ ..++++|+
T Consensus 164 ~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v----~~~~~~~~ 239 (814)
T 3mkq_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNV----SFAVFHPT 239 (814)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCE----EEEEECSS
T ss_pred eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCE----EEEEEcCC
Confidence 9999999998888888777667899999999 99999999999999999999988877777665444 34789999
Q ss_pred CcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCc-EEEEeCCCeEEEc
Q 017314 315 ESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKP-LASADKNGVVCVW 372 (373)
Q Consensus 315 ~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~-l~s~s~dg~i~iW 372 (373)
+.+|++|+.||.|++||+.+++.+..+..|..+|.+++|+|+|+. +++++.|+.+.+|
T Consensus 240 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (814)
T 3mkq_A 240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL 298 (814)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEE
Confidence 999999999999999999999999999999999999999999974 2444456666665
No 53
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.6e-41 Score=352.09 Aligned_cols=289 Identities=23% Similarity=0.380 Sum_probs=260.1
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDV 159 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 159 (373)
....+.+|.+.|++++|+|++++|++|+.|++|++||+.+++.+..+.+|.+.|.+++|+|+++++++++.|++|++||+
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 44578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEeecCCCcEEEEEEeeC-CCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEEeCCCc
Q 017314 160 NSGRVRHTLTGHTDKVCAVDVSKI-SSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGHIDGN 237 (373)
Q Consensus 160 ~~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~~dg~ 237 (373)
.+++++..+.+|...|.++.|++. +...+++|+.|++|++||+.++.+..++..|. .+.+++|+|++.++++|+.||.
T Consensus 687 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~ 766 (1249)
T 3sfz_A 687 ATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGT 766 (1249)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSE
T ss_pred CCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCe
Confidence 999999999999999999999874 34578999999999999999999888887664 5899999999999999999999
Q ss_pred EEEEECCCCeeeEEEeccc------------ccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeee-ecCCeeec
Q 017314 238 LRLWDIQTGKLLSEVAAHS------------LAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLR-ATGNRVAS 304 (373)
Q Consensus 238 i~iwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~~ 304 (373)
|++||+.+++....+.... ...+.+++|+|+++.+++++ ++.+.+||+.+......+. .+..
T Consensus 767 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~~~~---- 841 (1249)
T 3sfz_A 767 LRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTGHHS---- 841 (1249)
T ss_dssp EEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECSSSS----
T ss_pred EEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCCCCC----
Confidence 9999999988776654321 12678899999999999987 6889999999887766654 2222
Q ss_pred CeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 305 NWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 305 ~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
....++++|++.++++|+.||.|++||+.++..+..+.+|.++|.+++|+|+|++|++++.||.|++|+
T Consensus 842 ~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp CCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 234578999999999999999999999999999999999999999999999999999999999999995
No 54
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=9.7e-41 Score=312.03 Aligned_cols=280 Identities=29% Similarity=0.567 Sum_probs=245.8
Q ss_pred cceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 017314 79 TCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWD 158 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd 158 (373)
.+...+.+|.++|+++.|+ ++.|++|+.|++|++||+.+++....+.+|...|.+++++ ++.+++++.|++|++||
T Consensus 150 ~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd 225 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWD 225 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEE
T ss_pred cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEE
Confidence 4567889999999999997 6799999999999999999999999999999999999985 57899999999999999
Q ss_pred cCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEEeCCCc
Q 017314 159 VNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGHIDGN 237 (373)
Q Consensus 159 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~~dg~ 237 (373)
+.+++....+.+|...|.++.+ ++..+++|+.|++|++||++++.++.++..|. .+.++++ ++.++++|+.||.
T Consensus 226 ~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~ 300 (445)
T 2ovr_B 226 IETGQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS 300 (445)
T ss_dssp SSSCCEEEEEECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC
T ss_pred CCCCcEEEEEcCCcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe
Confidence 9999999999999999999987 46789999999999999999999888887654 4778887 8999999999999
Q ss_pred EEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcE
Q 017314 238 LRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESY 317 (373)
Q Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 317 (373)
|++||+++++.+..+..|. ..+.++.+ +++++++++.|+.+++||+++.+....+..+... ..... ++..++.+
T Consensus 301 i~i~d~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~-~~~v~--~~~~~~~~ 374 (445)
T 2ovr_B 301 IRVWDVETGNCIHTLTGHQ-SLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKH-QSAVT--CLQFNKNF 374 (445)
T ss_dssp EEEEETTTCCEEEEECCCC-SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECSTTSC-SSCEE--EEEECSSE
T ss_pred EEEEECCCCCEEEEEcCCc-ccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCC-CCCEE--EEEECCCE
Confidence 9999999999999888876 67787776 4679999999999999999998887777652211 11222 33346799
Q ss_pred EEEEeCCCcEEEEEccCceEEEEe-----ccCCccEEEEEEcCCCCcEEEEeCCCe----EEEcC
Q 017314 318 VAAGSADGSVYIWSISKADIVRTL-----KEHTAPVLSCSWSGLGKPLASADKNGV----VCVWT 373 (373)
Q Consensus 318 l~sgs~Dg~i~iwd~~~~~~~~~l-----~~h~~~V~~~~~s~~g~~l~s~s~dg~----i~iW~ 373 (373)
|++|+.||.|++||+.+++.+..+ .+|.++|++++|+|+|.+||+|+.||+ |.||+
T Consensus 375 l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~d 439 (445)
T 2ovr_B 375 VITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 439 (445)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEE
Confidence 999999999999999999998888 478899999999999999999999998 99885
No 55
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=315.91 Aligned_cols=282 Identities=14% Similarity=0.263 Sum_probs=230.6
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc-----------eeeeccccc------------cceEEEEEcCCC
Q 017314 86 AHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGS-----------LSSTLYGCL------------GSVLDLAITHDN 142 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-----------~~~~~~~~~------------~~v~~~~~~~~~ 142 (373)
.|.+.|++++|+|+|++|++|+.||.|+|||+.++. ....+.+|. +.|.+++|+|++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~ 105 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQK 105 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCC
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCC
Confidence 367899999999999999999999999999998876 477788998 889999999998
Q ss_pred --CEEEEEeCCCcEEEEEcCCCeeE---------------------------------------EE-eecCCCcEEEEEE
Q 017314 143 --RSVIAASSSNNLYVWDVNSGRVR---------------------------------------HT-LTGHTDKVCAVDV 180 (373)
Q Consensus 143 --~~l~s~s~d~~i~iwd~~~~~~~---------------------------------------~~-~~~h~~~v~~~~~ 180 (373)
..|++++.|++|++||+.+++.. .. ..+|...|.+++|
T Consensus 106 ~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 185 (447)
T 3dw8_B 106 NAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI 185 (447)
T ss_dssp SSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE
T ss_pred CcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE
Confidence 79999999999999999764432 12 3689999999999
Q ss_pred eeCCCCEEEEEeCCCcEEEEEccC-CeeeeEE--------eecCceeEEEEccCC-CEEEEEeCCCcEEEEECCCCee--
Q 017314 181 SKISSRHVVSAAYDRTLKVWDLHK-GYCVNTI--------IFHSNCNALAFSMDG-QTIFSGHIDGNLRLWDIQTGKL-- 248 (373)
Q Consensus 181 ~~~~~~~~~s~s~D~~i~vwd~~~-~~~~~~~--------~~~~~~~~~~~~~~g-~~l~sg~~dg~i~iwd~~~~~~-- 248 (373)
+| ++.++++| .|++|++||+++ +.+...+ .+...+.+++|+|++ .+|++|+.||.|++||+++++.
T Consensus 186 ~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 263 (447)
T 3dw8_B 186 NS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCD 263 (447)
T ss_dssp CT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSC
T ss_pred cC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccc
Confidence 98 67889998 799999999984 4444432 122458999999998 9999999999999999999886
Q ss_pred --eEEEecccc-----------cceEEEEEcCCCCEEEEeeCCCeEEEEEccc-cceeeeeeecCCeeec----------
Q 017314 249 --LSEVAAHSL-----------AAVTSISLSRSGNIILTSGRDNLHNLFDIRS-LEVCGSLRATGNRVAS---------- 304 (373)
Q Consensus 249 --~~~~~~~~~-----------~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~---------- 304 (373)
+..+..|.. ..|.+++|+|++++|++++. +.+++||++. .+....+..+......
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i 342 (447)
T 3dw8_B 264 RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCI 342 (447)
T ss_dssp TTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGG
T ss_pred ceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccc
Confidence 677776652 28999999999999999999 9999999987 6666666655321110
Q ss_pred -CeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEec---------------------------------cCCccEEE
Q 017314 305 -NWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLK---------------------------------EHTAPVLS 350 (373)
Q Consensus 305 -~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~---------------------------------~h~~~V~~ 350 (373)
....++++|++.+|++|+.||.|++||+.+++.+. +. .+...|.+
T Consensus 343 ~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 421 (447)
T 3dw8_B 343 FDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILH 421 (447)
T ss_dssp GCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCE
T ss_pred ccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccccccccCCceeE
Confidence 01126899999999999999999999999887753 22 23457899
Q ss_pred EEEcCCCCcEEEEeCCCeEEEc
Q 017314 351 CSWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 351 ~~~s~~g~~l~s~s~dg~i~iW 372 (373)
++|+|+|++||+++.++ +++|
T Consensus 422 ~~~~p~~~~la~~~~~~-~~~~ 442 (447)
T 3dw8_B 422 TAWHPKENIIAVATTNN-LYIF 442 (447)
T ss_dssp EEECSSSSEEEEECSSC-EEEE
T ss_pred EEECCCCCEEEEEecce-eeee
Confidence 99999999999998887 5565
No 56
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-41 Score=340.52 Aligned_cols=187 Identities=13% Similarity=0.194 Sum_probs=159.1
Q ss_pred HHhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccc
Q 017314 51 KLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCL 130 (373)
Q Consensus 51 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 130 (373)
.+|.+..|+.++.|+.... .+... ..|..+|.+++|+| +++|++++.|++|++||+.+++++..+. |.
T Consensus 31 ~lAsgs~Dg~I~lw~~~~~---------~~~~~-~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~ 98 (902)
T 2oaj_A 31 LLAIATVTGEVHIYGQQQV---------EVVIK-LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VP 98 (902)
T ss_dssp EEEEEETTSEEEEECSTTC---------EEEEE-CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CS
T ss_pred EEEEEeCCCEEEEEeCCCc---------EEEEE-cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CC
Confidence 4667778888888764321 12222 34788999999999 8899999999999999999998887775 66
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeE-----------EEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEE
Q 017314 131 GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVR-----------HTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKV 199 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~-----------~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~v 199 (373)
+.|++++|+|+++++++|+.|++|++||+.++++. ..+.+|..+|.+++|+|.+...+++|+.|++| +
T Consensus 99 ~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-l 177 (902)
T 2oaj_A 99 GKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-T 177 (902)
T ss_dssp SCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-E
T ss_pred CCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-E
Confidence 89999999999999999999999999999988754 33477999999999998656789999999999 9
Q ss_pred EEccCCeeeeEEeec-------------------CceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeE
Q 017314 200 WDLHKGYCVNTIIFH-------------------SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLS 250 (373)
Q Consensus 200 wd~~~~~~~~~~~~~-------------------~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~ 250 (373)
||++++.++..+..+ ..+.+++|+|+|.+|++|+.||+|++||+++++.+.
T Consensus 178 Wd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 178 YSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp EETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred EECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEE
Confidence 999999988887655 458999999999999999999999999998776543
No 57
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.1e-41 Score=309.24 Aligned_cols=248 Identities=18% Similarity=0.245 Sum_probs=206.0
Q ss_pred EecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceee----eccccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 017314 83 KINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSS----TLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWD 158 (373)
Q Consensus 83 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd 158 (373)
...+|...|++++|+|++ .+++++.|++|+|||+.+++... ...+|.+.|.+++|+|++++|++++.|++|++||
T Consensus 89 ~~~~~~~~V~~~~~s~d~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEK-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp EEEECSSCEEEEEEETTT-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEE
T ss_pred ccCCCCCCEEEEEEcCCC-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 445789999999999987 46678899999999998876543 3457999999999999999999999999999999
Q ss_pred cCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec---CceeEEEEccC-CCEEEEEeC
Q 017314 159 VNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH---SNCNALAFSMD-GQTIFSGHI 234 (373)
Q Consensus 159 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~-g~~l~sg~~ 234 (373)
+.+++++..+.+|...|.+++|++.....+++++.|++|++||++++.+...+... ..+.+++|+|+ +.+|++|+.
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 99999999999999999999999866678999999999999999988776554432 34889999997 568889999
Q ss_pred CCcEEEEECCCCeeeEEEecccccceEEEEEcCCC-CEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECC
Q 017314 235 DGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSG-NIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISP 313 (373)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 313 (373)
|+.|++||+++++.+..+..|. ..|++++|+|++ ++|++++.|+.|++||+++.+....+ .|...+ ..++|+|
T Consensus 248 d~~i~~wd~~~~~~~~~~~~~~-~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V----~~vafsP 321 (357)
T 4g56_B 248 TGNVSLVNIKNPDSAQTSAVHS-QNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFV----TGVAWSP 321 (357)
T ss_dssp SSCEEEEESSCGGGCEEECCCS-SCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCE----EEEEECS
T ss_pred ccceeEEECCCCcEeEEEeccc-eeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCE----EEEEEeC
Confidence 9999999999999999988886 789999999987 57999999999999999988766544 344333 4578998
Q ss_pred -CCcEEEEEeCCCcEEEEEccCceE
Q 017314 314 -DESYVAAGSADGSVYIWSISKADI 337 (373)
Q Consensus 314 -~~~~l~sgs~Dg~i~iwd~~~~~~ 337 (373)
++.+|+|||.||+|++|++.+...
T Consensus 322 ~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 322 LDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp SSTTEEEEEETTSCEEEEECC----
T ss_pred CCCCEEEEEcCCCeEEEEECCCCCc
Confidence 899999999999999999976443
No 58
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=4e-42 Score=314.92 Aligned_cols=276 Identities=25% Similarity=0.362 Sum_probs=228.7
Q ss_pred HhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc-------eee
Q 017314 52 LAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGS-------LSS 124 (373)
Q Consensus 52 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-------~~~ 124 (373)
+++.+.|+.++.|+... ..+.+.+.+|...|.+++|+|++++|++|+.|++|++||+.+.. ...
T Consensus 81 l~s~s~D~~v~iWd~~~---------~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~ 151 (380)
T 3iz6_a 81 IVSASQDGRLIVWNALT---------SQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSR 151 (380)
T ss_dssp EEEEETTSEEEEEETTT---------TEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCC
T ss_pred EEEEeCCCeEEEEECCC---------CccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCcccee
Confidence 44445556666655322 33567888999999999999999999999999999999987532 345
Q ss_pred eccccccceEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCeeEEEe-----ecCCCcEEEEEEeeCCCCEEEEEeCCCcEE
Q 017314 125 TLYGCLGSVLDLAITHDN-RSVIAASSSNNLYVWDVNSGRVRHTL-----TGHTDKVCAVDVSKISSRHVVSAAYDRTLK 198 (373)
Q Consensus 125 ~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~-----~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~ 198 (373)
.+.+|.+.|.++.|.|++ ..|++|+.|++|++||+.+++.+..+ .+|...|.++.+++.+++++++|+.|++|+
T Consensus 152 ~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~ 231 (380)
T 3iz6_a 152 VLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVR 231 (380)
T ss_dssp BCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEE
T ss_pred eccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEE
Confidence 678999999999999975 57999999999999999999988877 689999999999887889999999999999
Q ss_pred EEEcc-CCeeeeEEeecC-ceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccc------cceEEEEEcCCCC
Q 017314 199 VWDLH-KGYCVNTIIFHS-NCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSL------AAVTSISLSRSGN 270 (373)
Q Consensus 199 vwd~~-~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~------~~v~~~~~~~~~~ 270 (373)
+||++ .+.++..+..|. .+++++|+|+|.+|++|+.||+|++||+++++.+..+..+.. ..+++++|+|+|+
T Consensus 232 ~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 311 (380)
T 3iz6_a 232 LWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR 311 (380)
T ss_dssp EEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS
T ss_pred EEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC
Confidence 99998 446666666554 589999999999999999999999999999998877765431 2489999999999
Q ss_pred EEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCce
Q 017314 271 IILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKAD 336 (373)
Q Consensus 271 ~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~ 336 (373)
+|++++.|+.+++||+...+....+..........+..++++|+|.+|++||.||+|+||++...+
T Consensus 312 ~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 312 LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred EEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 999999999999999988777666532222222334557899999999999999999999987643
No 59
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.9e-42 Score=318.63 Aligned_cols=278 Identities=17% Similarity=0.258 Sum_probs=236.7
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q 017314 90 GCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLT 169 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 169 (373)
.+++++|+|++++|++|+.|+.|++||+.++.....+..+ ..+....|++++++|++++.|+.|++||+.+++....+.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 3457899999999999999999999999988777666666 445555789999999999999999999999999998889
Q ss_pred cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCCEEEEEeCCCcEEEEECCCCee
Q 017314 170 GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKL 248 (373)
Q Consensus 170 ~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~ 248 (373)
+|...|.+++|+| ++.++++|+.|++|++||+.++.++..+..| ..+.+++|+|++.+|++|+.||.|++||+++++.
T Consensus 137 ~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 137 AHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTT 215 (420)
T ss_dssp SSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEE
T ss_pred cccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCce
Confidence 9999999999998 5789999999999999999999888888765 4589999999999999999999999999999999
Q ss_pred eEEEeccc--c---------------------cceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecC
Q 017314 249 LSEVAAHS--L---------------------AAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASN 305 (373)
Q Consensus 249 ~~~~~~~~--~---------------------~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~ 305 (373)
+..+..+. . ..+.+++|+|++++|++++.|+.+++||+++.+....+.... ...
T Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~---~~~ 292 (420)
T 3vl1_A 216 IHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKF---TCS 292 (420)
T ss_dssp EEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTT---SSC
T ss_pred eEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccccc---CCC
Confidence 88886532 1 234445568899999999999999999999887666554321 123
Q ss_pred eeeeEECCCCc-EEEEEeCCCcEEEEEccCce-EEEEecc-CCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 306 WSRSCISPDES-YVAAGSADGSVYIWSISKAD-IVRTLKE-HTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 306 ~~~~~~s~~~~-~l~sgs~Dg~i~iwd~~~~~-~~~~l~~-h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
...++++|++. +|++|+.||.|++||+.+++ ++..+.+ |..+|.++.| |++++|++++.||.|++|+
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEE
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEe
Confidence 34578999998 99999999999999999874 4777776 6677888855 5788999999999999995
No 60
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3.7e-41 Score=352.01 Aligned_cols=293 Identities=24% Similarity=0.362 Sum_probs=256.0
Q ss_pred cceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcC--CCCEEEEEeCCCcEEE
Q 017314 79 TCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITH--DNRSVIAASSSNNLYV 156 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~s~s~d~~i~i 156 (373)
.+...+.+|.+.|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|...|.+++|+| ++..+++++.|++|++
T Consensus 648 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 648 EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence 45678899999999999999999999999999999999999999999999999999999999 4568999999999999
Q ss_pred EEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe------------------------
Q 017314 157 WDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII------------------------ 212 (373)
Q Consensus 157 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~------------------------ 212 (373)
||+.++++..++.+|...|.+++|+| ++.++++|+.||+|++||+.++.....+.
T Consensus 728 wd~~~~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 806 (1249)
T 3sfz_A 728 WDLNQKECRNTMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSW 806 (1249)
T ss_dssp EETTSSSEEEEECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCB
T ss_pred EECCCcchhheecCCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEE
Confidence 99999999999999999999999998 67899999999999999998776544331
Q ss_pred --------------------------------ecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccce
Q 017314 213 --------------------------------FHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAV 260 (373)
Q Consensus 213 --------------------------------~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v 260 (373)
+...+.+++|+|++.++++|+.||.|++||+.++..+..+..|. ..|
T Consensus 807 s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~-~~v 885 (1249)
T 3sfz_A 807 SADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHL-SWV 885 (1249)
T ss_dssp CTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCS-SCE
T ss_pred CCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCc-cce
Confidence 11346789999999999999999999999999999999988886 789
Q ss_pred EEEEEcCCCCEEEEeeCCCeEEEEEccccceeee-----------------------------eeecCC----eeecCee
Q 017314 261 TSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGS-----------------------------LRATGN----RVASNWS 307 (373)
Q Consensus 261 ~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~-----------------------------~~~~~~----~~~~~~~ 307 (373)
++++|+|++++|++++.|+.+++||+........ ...... .......
T Consensus 886 ~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 965 (1249)
T 3sfz_A 886 HGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVS 965 (1249)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEE
Confidence 9999999999999999999999999764211000 000000 0012344
Q ss_pred eeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 308 RSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 308 ~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
.++++|++.++++|+.||.|++|++.+++....+.+|..+|.+++|+|+|++|++++.||.|++|+
T Consensus 966 ~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd 1031 (1249)
T 3sfz_A 966 CCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWN 1031 (1249)
T ss_dssp EEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 578999999999999999999999999999999999999999999999999999999999999995
No 61
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.5e-41 Score=303.63 Aligned_cols=293 Identities=14% Similarity=0.215 Sum_probs=241.3
Q ss_pred ccccceEEecCccCcEEEEEEcCC---CCEEEEeeCCCcEEEEeCCC-Ccee-eeccccccceEEEEEcCCCCEEEEEeC
Q 017314 76 VPSTCKHKINAHEGGCASILFEYN---SARLISGGQDKSIKLWDTNT-GSLS-STLYGCLGSVLDLAITHDNRSVIAASS 150 (373)
Q Consensus 76 ~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~s~D~~v~iwd~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~s~ 150 (373)
.|......+.+|.+.|++++|+|+ |++|++|+.|+.|++||+.+ +... ..+.+|.+.|.+++|+|++++|++++.
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 106 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASC 106 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcC
Confidence 455667788999999999999999 59999999999999999987 5444 778899999999999999999999999
Q ss_pred CCcEEEEEcCCCeeEEEeecCCCcEEEEEE--eeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCE
Q 017314 151 SNNLYVWDVNSGRVRHTLTGHTDKVCAVDV--SKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQT 228 (373)
Q Consensus 151 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~ 228 (373)
|++|++||+.+++... +.+|...|.++.| ++ ++.++++++.|++|++||++++.++..+..+..+.++.+. +..
T Consensus 107 dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~ 182 (368)
T 3mmy_A 107 DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVI--YPM 182 (368)
T ss_dssp TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEE--TTE
T ss_pred CCcEEEEEcCCCCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEec--CCe
Confidence 9999999999998766 5679999999999 44 5678999999999999999999988888877776666665 458
Q ss_pred EEEEeCCCcEEEEECCCCeeeEEE-ecccccceEEEEEcCCCCE----EEEeeCCCeEEEEEcccc---ceeeeeeecCC
Q 017314 229 IFSGHIDGNLRLWDIQTGKLLSEV-AAHSLAAVTSISLSRSGNI----ILTSGRDNLHNLFDIRSL---EVCGSLRATGN 300 (373)
Q Consensus 229 l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~----l~s~~~d~~i~~~d~~~~---~~~~~~~~~~~ 300 (373)
+++++.|+.+++||++........ .......+.++.+.++... +++++.|+.+++||++.. .....+..+..
T Consensus 183 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~ 262 (368)
T 3mmy_A 183 AVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRS 262 (368)
T ss_dssp EEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEE
T ss_pred eEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeec
Confidence 889999999999999876443322 2222244566666555544 999999999999999876 33334433322
Q ss_pred e--------eecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEc
Q 017314 301 R--------VASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 301 ~--------~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW 372 (373)
. ....+..++++|++.+|++|+.||.|++||+.+++++..+.+|..+|.+++|+|+|++|++++.|+..+.|
T Consensus 263 ~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 263 NGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGH 342 (368)
T ss_dssp C----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCG
T ss_pred ccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccccc
Confidence 1 01134567899999999999999999999999999999999999999999999999999999999855443
No 62
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.7e-40 Score=309.54 Aligned_cols=280 Identities=21% Similarity=0.398 Sum_probs=242.7
Q ss_pred cceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEc--CCCCEEEEEeCCCcEEE
Q 017314 79 TCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAIT--HDNRSVIAASSSNNLYV 156 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~~~l~s~s~d~~i~i 156 (373)
.+...+.+|.++|++++|++++ .|++|+.|++|++||+.+++....+.+|.+.|.+++|+ +++.++++++.|++|++
T Consensus 153 ~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~v 231 (464)
T 3v7d_B 153 KFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 231 (464)
T ss_dssp EEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEE
T ss_pred cEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEE
Confidence 4567888999999999999988 99999999999999999999999999999999999998 57789999999999999
Q ss_pred EEcCCCe-----------------------eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEee
Q 017314 157 WDVNSGR-----------------------VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF 213 (373)
Q Consensus 157 wd~~~~~-----------------------~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~ 213 (373)
||+.++. ....+.+|...|.++.. +++++++|+.|++|++||+.++.++..+..
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~ 308 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSG---HGNIVVSGSYDNTLIVWDVAQMKCLYILSG 308 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEE---ETTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcC---CCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 9998764 25578899999988743 467999999999999999999999888876
Q ss_pred c-CceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEcccccee
Q 017314 214 H-SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVC 292 (373)
Q Consensus 214 ~-~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~ 292 (373)
| ..+.+++|+|+++++++|+.||.|++||+++++.+..+..|. ..|.+++++ +++|++++.|+.+++||+++....
T Consensus 309 ~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~-~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 309 HTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHT-ALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCS-SCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred CCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCC-CcEEEEEEc--CCEEEEEeCCCcEEEEECCCCcee
Confidence 5 458999999999999999999999999999999999998886 789999997 589999999999999999987654
Q ss_pred eeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEE-eccCCccEEEEEEcCCCCcEEEEeCCCeEEE
Q 017314 293 GSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRT-LKEHTAPVLSCSWSGLGKPLASADKNGVVCV 371 (373)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~-l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~i 371 (373)
..... .. .....+++|++.+|++|+ ||.|++||+.+++++.. +.+|..+|.+++|+ ....+++++.||.+.+
T Consensus 386 ~~~~~-~~----~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i 458 (464)
T 3v7d_B 386 FSYHH-TN----LSAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFL 458 (464)
T ss_dssp EEEEC-TT----CCCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEE
T ss_pred eeecC-CC----CccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEE
Confidence 44321 11 123467899999999999 89999999999999886 67899999999998 3456667777887766
Q ss_pred c
Q 017314 372 W 372 (373)
Q Consensus 372 W 372 (373)
|
T Consensus 459 ~ 459 (464)
T 3v7d_B 459 E 459 (464)
T ss_dssp E
T ss_pred E
Confidence 5
No 63
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.2e-41 Score=304.70 Aligned_cols=278 Identities=11% Similarity=0.109 Sum_probs=239.5
Q ss_pred ecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc---eeeeccccccceEEEEEcCCCC-EEEEEeCCCcEEEEEc
Q 017314 84 INAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGS---LSSTLYGCLGSVLDLAITHDNR-SVIAASSSNNLYVWDV 159 (373)
Q Consensus 84 ~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~---~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~ 159 (373)
..+|.+.|++++|+|++.+|++|+.|+.|++||+.++. ....+.+|...|.+++|+|+++ +|++++.|+.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~ 86 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDL 86 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECS
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEe
Confidence 45899999999999999999999999999999998876 3455668999999999999999 9999999999999999
Q ss_pred -CCCeeEEEeec--CCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC---------CeeeeEEeecCceeEEEEccCCC
Q 017314 160 -NSGRVRHTLTG--HTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK---------GYCVNTIIFHSNCNALAFSMDGQ 227 (373)
Q Consensus 160 -~~~~~~~~~~~--h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~g~ 227 (373)
.+++. ..+.+ |...|.+++|++ +..+++++.|++|++||+++ +.++..+.....+.+++|+|++
T Consensus 87 ~~~~~~-~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~- 162 (342)
T 1yfq_A 87 IGSPSF-QALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR- 162 (342)
T ss_dssp SSSSSE-EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-
T ss_pred ccCCce-EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-
Confidence 87765 67888 999999999998 78999999999999999987 6666666655678999999987
Q ss_pred EEEEEeCCCcEEEEECCC-Cee-eEEEecccccceEEEEEcC-CCCEEEEeeCCCeEEEEEcccc------ceeeeeeec
Q 017314 228 TIFSGHIDGNLRLWDIQT-GKL-LSEVAAHSLAAVTSISLSR-SGNIILTSGRDNLHNLFDIRSL------EVCGSLRAT 298 (373)
Q Consensus 228 ~l~sg~~dg~i~iwd~~~-~~~-~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~~~d~~~~------~~~~~~~~~ 298 (373)
+++++.|+.|++||+++ +.. ...........+.+++|+| +++++++++.|+.+++|+++.. +....+..+
T Consensus 163 -l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T 1yfq_A 163 -LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241 (342)
T ss_dssp -EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECC
T ss_pred -EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecc
Confidence 99999999999999988 543 2223333346899999999 9999999999999999999876 555555554
Q ss_pred CCe-----eecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccC-CccEEEEEEcCCCCcEEEEeCCCe
Q 017314 299 GNR-----VASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEH-TAPVLSCSWSGLGKPLASADKNGV 368 (373)
Q Consensus 299 ~~~-----~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h-~~~V~~~~~s~~g~~l~s~s~dg~ 368 (373)
... .......++++|++.+|++|+.||.|++||+.+++.+..+.+| ..+|.+++ |+|++|++++.||.
T Consensus 242 ~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp CCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEECTH
T ss_pred cccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecCCc
Confidence 331 1123455789999999999999999999999999999999998 99999999 99999999999997
No 64
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.8e-40 Score=307.99 Aligned_cols=274 Identities=26% Similarity=0.525 Sum_probs=244.1
Q ss_pred eEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 017314 81 KHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 160 (373)
...+.+|.+.|.. ++++++++|++|+.|++|++||+.+++....+.+|.+.|.+++|+ ++.+++++.|++|++||+.
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECC
Confidence 4578899987543 355578999999999999999999999999999999999999997 5699999999999999999
Q ss_pred CCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEEeCCCcEE
Q 017314 161 SGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGHIDGNLR 239 (373)
Q Consensus 161 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~~dg~i~ 239 (373)
+++....+.+|...|.++.++ ++.+++|+.|++|++||+.++.++..+..|. .+.++++ ++.++++|+.||.|+
T Consensus 188 ~~~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~ 262 (445)
T 2ovr_B 188 TGECIHTLYGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVK 262 (445)
T ss_dssp TTEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEE
T ss_pred cCcEEEEECCCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEE
Confidence 999999999999999999885 4689999999999999999998888877654 4778877 788999999999999
Q ss_pred EEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEE
Q 017314 240 LWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVA 319 (373)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 319 (373)
+||+++++.+..+..|. ..|.++.| ++.++++++.|+.+++||+++.+....+..+...+ .++.+++.+|+
T Consensus 263 iwd~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v------~~~~~~~~~l~ 333 (445)
T 2ovr_B 263 VWDPETETCLHTLQGHT-NRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLT------SGMELKDNILV 333 (445)
T ss_dssp EEEGGGTEEEEEECCCS-SCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCE------EEEEEETTEEE
T ss_pred EEECCCCcEeEEecCCC-CceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccE------EEEEEeCCEEE
Confidence 99999999999988876 78999999 78999999999999999999988887776655433 24566789999
Q ss_pred EEeCCCcEEEEEccCceEEEEecc---CCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 320 AGSADGSVYIWSISKADIVRTLKE---HTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 320 sgs~Dg~i~iwd~~~~~~~~~l~~---h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+|+.||.|++||+.+++.+..+.+ |..+|++++|+ +++|++++.||.|++|+
T Consensus 334 ~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd 388 (445)
T 2ovr_B 334 SGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWD 388 (445)
T ss_dssp EEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEE
Confidence 999999999999999999999886 88999999996 58999999999999995
No 65
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.1e-40 Score=308.93 Aligned_cols=269 Identities=26% Similarity=0.509 Sum_probs=238.8
Q ss_pred cCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCee
Q 017314 85 NAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRV 164 (373)
Q Consensus 85 ~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 164 (373)
.+|..+|.++.| ++++|++|+.|++|++||+.+++....+.+|.+.|.+++| +++.|++|+.|++|++||+.+++.
T Consensus 130 ~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 130 SETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcE
Confidence 457778988877 7899999999999999999999999999999999999988 788999999999999999999999
Q ss_pred EEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeee---eEEeec-CceeEEEEccCCCEEEEEeCCCcEEE
Q 017314 165 RHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCV---NTIIFH-SNCNALAFSMDGQTIFSGHIDGNLRL 240 (373)
Q Consensus 165 ~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~---~~~~~~-~~~~~~~~~~~g~~l~sg~~dg~i~i 240 (373)
+..+.+|...|.++.++ ++.+++|+.|++|++||+.++... ..+..| ..+.++++ ++.++++|+.||.|++
T Consensus 206 ~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 280 (435)
T ss_dssp EEEECCCCSCEEEEECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EEEEcCCCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence 99999999999999885 458999999999999999887654 333333 34777777 7899999999999999
Q ss_pred EECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEE
Q 017314 241 WDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAA 320 (373)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~s 320 (373)
||+++++.+..+..|. ..|.++.+ +++++++++.|+.+++||+++.+....+..+...+. ++..++.+|++
T Consensus 281 wd~~~~~~~~~~~~~~-~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~------~~~~~~~~l~s 351 (435)
T 1p22_A 281 WNTSTCEFVRTLNGHK-RGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR------CIRFDNKRIVS 351 (435)
T ss_dssp EETTTCCEEEEEECCS-SCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE------EEECCSSEEEE
T ss_pred EECCcCcEEEEEcCCC-CcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEE------EEEecCCEEEE
Confidence 9999999999998886 78999998 468999999999999999999988888877665543 34458999999
Q ss_pred EeCCCcEEEEEccCce---------EEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 321 GSADGSVYIWSISKAD---------IVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 321 gs~Dg~i~iwd~~~~~---------~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
|+.||.|++||+.++. ++..+.+|.++|++++| ++++|++++.||.|++|+
T Consensus 352 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 411 (435)
T ss_dssp EETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred EeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEE
Confidence 9999999999998776 88899999999999999 788999999999999996
No 66
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.9e-41 Score=301.48 Aligned_cols=287 Identities=16% Similarity=0.228 Sum_probs=222.5
Q ss_pred EEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC----ceeeeccccccceEEEEEcC--CCCEEEEEeCCCcEE
Q 017314 82 HKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTG----SLSSTLYGCLGSVLDLAITH--DNRSVIAASSSNNLY 155 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~l~s~s~d~~i~ 155 (373)
..+.+|.+.|++++|+|++++|++|+.|++|++||+.++ .....+.+|...|.+++|+| ++.+|++++.|++|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 456899999999999999999999999999999999876 45667789999999999999 699999999999999
Q ss_pred EEEcCCC---------eeEEEeecCCCcEEEEEEeeCC-CCEEEEEeCCCcEEEEEccCCeeeeEEe-------------
Q 017314 156 VWDVNSG---------RVRHTLTGHTDKVCAVDVSKIS-SRHVVSAAYDRTLKVWDLHKGYCVNTII------------- 212 (373)
Q Consensus 156 iwd~~~~---------~~~~~~~~h~~~v~~~~~~~~~-~~~~~s~s~D~~i~vwd~~~~~~~~~~~------------- 212 (373)
+||+.++ +....+.+|...|.+++|+|.. +.++++++.|++|++||++++..+..+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999887 6688889999999999999842 7899999999999999998876543332
Q ss_pred -ecCceeEEEEccC---CCEEEEEeCCCcEEEEECCCCee--eEEEecccccceEEEEEcCCC----CEEEEeeCCCeEE
Q 017314 213 -FHSNCNALAFSMD---GQTIFSGHIDGNLRLWDIQTGKL--LSEVAAHSLAAVTSISLSRSG----NIILTSGRDNLHN 282 (373)
Q Consensus 213 -~~~~~~~~~~~~~---g~~l~sg~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~----~~l~s~~~d~~i~ 282 (373)
....+.+++|+|+ +.++++++.|+.+.+|+...++. +..+..|. ..|++++|+|++ ++|++++.|+.++
T Consensus 165 ~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHK-SLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCC-SCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCC-cceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 1234789999997 99999999999998888887765 55566665 789999999998 8999999999999
Q ss_pred EEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEE----EeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCC
Q 017314 283 LFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAA----GSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGK 358 (373)
Q Consensus 283 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~s----gs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~ 358 (373)
+||++................ ....++...+++. +.....+.+|+....+.+..+.+|..+|++++|+|+|+
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~ 319 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSN----MFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGT 319 (351)
T ss_dssp EEEEEECC-------------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSC
T ss_pred EEeCCCCcCccccCCccccee----ccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCC
Confidence 999986543222211111111 1112333333333 34455677888888888999999999999999999999
Q ss_pred cEEEEeCCCeEEEcC
Q 017314 359 PLASADKNGVVCVWT 373 (373)
Q Consensus 359 ~l~s~s~dg~i~iW~ 373 (373)
+|++++.||.|+||+
T Consensus 320 ~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 320 ILSSAGDDGKVRLWK 334 (351)
T ss_dssp CEEEEETTSCEEEEE
T ss_pred EEEEecCCCcEEEEe
Confidence 999999999999995
No 67
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=299.57 Aligned_cols=283 Identities=22% Similarity=0.285 Sum_probs=220.1
Q ss_pred HHhcccccceeeccccCccccccccccccceE-EecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC--ceeeecc
Q 017314 51 KLAKQQVDGVVRRSEEGAEFFAESTVPSTCKH-KINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTG--SLSSTLY 127 (373)
Q Consensus 51 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~--~~~~~~~ 127 (373)
.+++...|+.++.|+..... ..+.. ...+|.+.|.+++|+|++++|++|+.|++|++||+.++ .....+.
T Consensus 30 ~las~~~D~~i~iw~~~~~~-------~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 102 (345)
T 3fm0_A 30 LLASCGGDRRIRIWGTEGDS-------WICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE 102 (345)
T ss_dssp CEEEEETTSCEEEEEEETTE-------EEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC
T ss_pred EEEEEcCCCeEEEEEcCCCc-------ceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc
Confidence 46667778888887643211 01122 34689999999999999999999999999999998876 3567889
Q ss_pred ccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCC---eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC
Q 017314 128 GCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSG---RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK 204 (373)
Q Consensus 128 ~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~ 204 (373)
+|.+.|.+++|+|++++|++++.|++|++||+.++ +++..+.+|...|.+++|+| ++.++++|+.|++|++||...
T Consensus 103 ~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~ 181 (345)
T 3fm0_A 103 GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEE 181 (345)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEET
T ss_pred CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999999999999876 45678889999999999998 577899999999999999988
Q ss_pred Ce--eeeEEeec-CceeEEEEccCCCEEEEEeCCCcEEEEECCCC---------------eeeEEEecccccceEEEEEc
Q 017314 205 GY--CVNTIIFH-SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTG---------------KLLSEVAAHSLAAVTSISLS 266 (373)
Q Consensus 205 ~~--~~~~~~~~-~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~---------------~~~~~~~~~~~~~v~~~~~~ 266 (373)
+. +..++..| ..+.+++|+|+|++|++|+.|++|++||.... +++..+...+...|.+++|+
T Consensus 182 ~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~ 261 (345)
T 3fm0_A 182 DDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWC 261 (345)
T ss_dssp TEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEEC
T ss_pred CCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEe
Confidence 75 33455555 45899999999999999999999999996322 23344444344789999999
Q ss_pred CCCCEEEEeeCCCeEEEEEccccce----eeeeeec-CCeeecCeeeeEECCCC-cEEEEEeCCCcEEEEEccCceEEEE
Q 017314 267 RSGNIILTSGRDNLHNLFDIRSLEV----CGSLRAT-GNRVASNWSRSCISPDE-SYVAAGSADGSVYIWSISKADIVRT 340 (373)
Q Consensus 267 ~~~~~l~s~~~d~~i~~~d~~~~~~----~~~~~~~-~~~~~~~~~~~~~s~~~-~~l~sgs~Dg~i~iwd~~~~~~~~~ 340 (373)
|++..|++++.|+.+++|+...... ...+..+ .......+..++|+|++ .+|||||.||+|++|++.+++....
T Consensus 262 ~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~~ 341 (345)
T 3fm0_A 262 QLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLHH 341 (345)
T ss_dssp TTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC------
T ss_pred cCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCccc
Confidence 9999999999999999999865321 1111111 01112234567899988 5999999999999999988776544
Q ss_pred e
Q 017314 341 L 341 (373)
Q Consensus 341 l 341 (373)
+
T Consensus 342 ~ 342 (345)
T 3fm0_A 342 H 342 (345)
T ss_dssp -
T ss_pred c
Confidence 3
No 68
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.2e-40 Score=297.09 Aligned_cols=278 Identities=20% Similarity=0.267 Sum_probs=239.4
Q ss_pred ccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCee--
Q 017314 87 HEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRV-- 164 (373)
Q Consensus 87 h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~-- 164 (373)
|.++|.+++|+|||+.++++..++.+.+|+...........+|...|.+++|+|+++++++++ |+.|++||+.+++.
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~ 86 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKS 86 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCS
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCcee
Confidence 557899999999999999999888888887666555555568999999999999999999998 99999999987642
Q ss_pred -EEEee--cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCe--eeeEEeec-CceeEEEEccCCCEEEEEeCCCcE
Q 017314 165 -RHTLT--GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGY--CVNTIIFH-SNCNALAFSMDGQTIFSGHIDGNL 238 (373)
Q Consensus 165 -~~~~~--~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~--~~~~~~~~-~~~~~~~~~~~g~~l~sg~~dg~i 238 (373)
...+. +|...|.+++|+| +++++++++.|++|++||+.++. ....+..+ ..+.+++|+|+++++++++.||.|
T Consensus 87 ~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v 165 (337)
T 1gxr_A 87 PVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNI 165 (337)
T ss_dssp CSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred eeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 33333 7999999999998 67899999999999999999876 34444444 348999999999999999999999
Q ss_pred EEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEE
Q 017314 239 RLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYV 318 (373)
Q Consensus 239 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 318 (373)
++||+++++.+..+..|. ..+.+++|+|++++|++++.|+.+++||+++.+....+.... ....++++|++.+|
T Consensus 166 ~~~d~~~~~~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l 239 (337)
T 1gxr_A 166 AVWDLHNQTLVRQFQGHT-DGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS-----QIFSLGYCPTGEWL 239 (337)
T ss_dssp EEEETTTTEEEEEECCCS-SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS-----CEEEEEECTTSSEE
T ss_pred EEEeCCCCceeeeeeccc-CceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCC-----ceEEEEECCCCCEE
Confidence 999999999998888776 789999999999999999999999999999887766654322 23457899999999
Q ss_pred EEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 319 AAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 319 ~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
++|+.||.|++||+.+++.. .+..|..+|.+++|+|++++|++++.||.|++|+
T Consensus 240 ~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~ 293 (337)
T 1gxr_A 240 AVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWR 293 (337)
T ss_dssp EEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEECCCCCEEEEecCCCcEEEEE
Confidence 99999999999999988764 5678999999999999999999999999999995
No 69
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.2e-40 Score=296.23 Aligned_cols=279 Identities=22% Similarity=0.300 Sum_probs=219.2
Q ss_pred HHhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccc
Q 017314 51 KLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCL 130 (373)
Q Consensus 51 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 130 (373)
.+++.+.|+.++.|+...... ......+...+.+|...|.+++|+|++.+|++|+.|++|++||+.+++....+.+|.
T Consensus 41 ~l~sgs~D~~v~iWd~~~~~~--~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~ 118 (343)
T 2xzm_R 41 VLISGSRDKTVMIWKLYEEEQ--NGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ 118 (343)
T ss_dssp EEEEEETTSCEEEEEECSSCC--SSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCC
T ss_pred EEEEEcCCCEEEEEECCcCCc--ccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC
Confidence 467778888888886432110 001123456789999999999999999999999999999999999999999999999
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEee---cCCCcEEEEEEeeCC---------CCEEEEEeCCCcEE
Q 017314 131 GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLT---GHTDKVCAVDVSKIS---------SRHVVSAAYDRTLK 198 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~---~h~~~v~~~~~~~~~---------~~~~~s~s~D~~i~ 198 (373)
..|.+++|+|++++|++++.|++|++||+... ....+. +|...|.++.|+|.. ..++++++.|++|+
T Consensus 119 ~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 119 SEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred CcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 99999999999999999999999999999744 333333 799999999998853 26899999999999
Q ss_pred EEEccCCeeeeEEeec-CceeEEEEccCCCEEEEEeCCCcEEEEECCC-CeeeEEEecccccceEEEEEcCCCCEEEEee
Q 017314 199 VWDLHKGYCVNTIIFH-SNCNALAFSMDGQTIFSGHIDGNLRLWDIQT-GKLLSEVAAHSLAAVTSISLSRSGNIILTSG 276 (373)
Q Consensus 199 vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 276 (373)
+||. .......+..| ..+.+++|+|+|++|++|+.||.|++||++. ......+... ..|.+++|+|++.++++ +
T Consensus 198 iwd~-~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~--~~v~~v~~sp~~~~la~-~ 273 (343)
T 2xzm_R 198 VWNT-NFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAG--STINQIAFNPKLQWVAV-G 273 (343)
T ss_dssp EEET-TTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECS--SCEEEEEECSSSCEEEE-E
T ss_pred EEcC-CCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCC--CcEEEEEECCCCCEEEE-E
Confidence 9994 45555555555 4589999999999999999999999999954 3344444322 46999999999988765 5
Q ss_pred CCCeEEEEEccccceee--eeeecC-------CeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCce
Q 017314 277 RDNLHNLFDIRSLEVCG--SLRATG-------NRVASNWSRSCISPDESYVAAGSADGSVYIWSISKAD 336 (373)
Q Consensus 277 ~d~~i~~~d~~~~~~~~--~~~~~~-------~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~ 336 (373)
.|+.+++||+.+.+... .+.... .........++|+|+|.+|++|+.||.|++|++.++.
T Consensus 274 ~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 274 TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEEEEE
T ss_pred CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEEccC
Confidence 67889999998755433 222110 0111223457899999999999999999999987653
No 70
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.1e-40 Score=318.68 Aligned_cols=286 Identities=15% Similarity=0.269 Sum_probs=251.1
Q ss_pred cceEEecCccCc-EEEEEEcC--CCCEEEEeeCCCcEEEEeCCCC--------ceeeeccccccceEEEEEcCCCCEEEE
Q 017314 79 TCKHKINAHEGG-CASILFEY--NSARLISGGQDKSIKLWDTNTG--------SLSSTLYGCLGSVLDLAITHDNRSVIA 147 (373)
Q Consensus 79 ~~~~~~~~h~~~-v~~~~~~~--~~~~l~s~s~D~~v~iwd~~~~--------~~~~~~~~~~~~v~~~~~~~~~~~l~s 147 (373)
.....+.+|.+. |++++|+| ++++|++|+.|++|++||+.++ .....+.+|...|.+++|+|++++|++
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 133 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCV 133 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEE
Confidence 467788999999 99999999 9999999999999999999754 667778889999999999999999999
Q ss_pred EeCC----CcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC----ceeE
Q 017314 148 ASSS----NNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS----NCNA 219 (373)
Q Consensus 148 ~s~d----~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~----~~~~ 219 (373)
++.+ +.|++|| +++....+.+|...|.+++|+|.....+++++.|++|++||+.++.+...+..|. .+.+
T Consensus 134 ~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~ 211 (615)
T 1pgu_A 134 VGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRD 211 (615)
T ss_dssp EECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEE
T ss_pred eccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEE
Confidence 9988 6888888 6678889999999999999998655589999999999999999999888887665 4899
Q ss_pred EEEccC-CCEEEEEeCCCcEEEEECCCCeeeEEE-e---cccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeee
Q 017314 220 LAFSMD-GQTIFSGHIDGNLRLWDIQTGKLLSEV-A---AHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGS 294 (373)
Q Consensus 220 ~~~~~~-g~~l~sg~~dg~i~iwd~~~~~~~~~~-~---~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~ 294 (373)
++|+|+ +++|++|+.||.|++||+++++.+..+ . .|. ..|.+++|+ ++++|++++.|+.+++||+++.+....
T Consensus 212 ~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~-~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 212 VEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ-GGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp EEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCC-SCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccC-CceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEE
Confidence 999999 999999999999999999999998888 4 554 789999999 999999999999999999999888777
Q ss_pred eeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 295 LRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 295 ~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+..+..........+.+ +++.++++|+.||.|++||+.+++++..+.+|..+|.+++| |+ |++++.||.|++|+
T Consensus 290 ~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~i~~w~ 363 (615)
T 1pgu_A 290 WTLDKQQLGNQQVGVVA-TGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGRIMEWS 363 (615)
T ss_dssp EECCTTCGGGCEEEEEE-EETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSCEEETT
T ss_pred EcCCCCcccCceeEEEe-CCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCeEEEEE
Confidence 76654333333333444 48999999999999999999999999999999999999999 87 77777888888775
No 71
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-40 Score=295.60 Aligned_cols=272 Identities=19% Similarity=0.294 Sum_probs=208.5
Q ss_pred HHhcccccceeeccccCccccccccccccceEEe-cC-ccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCC-------Cc
Q 017314 51 KLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKI-NA-HEGGCASILFEYNSARLISGGQDKSIKLWDTNT-------GS 121 (373)
Q Consensus 51 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~-------~~ 121 (373)
.+++...|+.++.|+.... .......+ .+ |.+.|.+++|+|++++|++|+.|++|+|||+.. ..
T Consensus 26 ~las~~~D~~i~lw~~~~~-------~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~ 98 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYD-------DFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMD 98 (330)
T ss_dssp EEEEEESSSCEEEEECSSS-------CCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCE
T ss_pred EEEEEcCCCEEEEEEecCC-------CeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccce
Confidence 4667778888888764321 01223344 34 999999999999999999999999999999853 34
Q ss_pred eeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCC----CeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcE
Q 017314 122 LSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNS----GRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTL 197 (373)
Q Consensus 122 ~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~----~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i 197 (373)
....+.+|.+.|.+++|+|++++|++++.|++|++||+.. .+++..+.+|...|.++.|+| ++.+|+||+.|++|
T Consensus 99 ~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s~s~D~~i 177 (330)
T 2hes_X 99 LLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHP-SEALLASSSYDDTV 177 (330)
T ss_dssp EEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECS-SSSEEEEEETTSCE
T ss_pred eEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECC-CCCEEEEEcCCCeE
Confidence 5677889999999999999999999999999999999943 256788999999999999998 57899999999999
Q ss_pred EEEEccCC--eeeeEEeecC-ceeEEEEccC--CCEEEEEeCCCcEEEEECCCC--------eeeEEEecccccceEEEE
Q 017314 198 KVWDLHKG--YCVNTIIFHS-NCNALAFSMD--GQTIFSGHIDGNLRLWDIQTG--------KLLSEVAAHSLAAVTSIS 264 (373)
Q Consensus 198 ~vwd~~~~--~~~~~~~~~~-~~~~~~~~~~--g~~l~sg~~dg~i~iwd~~~~--------~~~~~~~~~~~~~v~~~~ 264 (373)
++||...+ .++..+..|. .+.+++|+|+ +.+|++|+.|++|++||++.+ .....+...+...|.+++
T Consensus 178 ~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 257 (330)
T 2hes_X 178 RIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVA 257 (330)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEE
T ss_pred EEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEE
Confidence 99999876 5666666554 5899999998 778999999999999998754 333444442347899999
Q ss_pred EcCCCCEEEEeeCCCeEEEEEccccc--eeeee-eecCCeeecCeeeeEECC--CCcEEEEEeCCCcEEEEEccC
Q 017314 265 LSRSGNIILTSGRDNLHNLFDIRSLE--VCGSL-RATGNRVASNWSRSCISP--DESYVAAGSADGSVYIWSISK 334 (373)
Q Consensus 265 ~~~~~~~l~s~~~d~~i~~~d~~~~~--~~~~~-~~~~~~~~~~~~~~~~s~--~~~~l~sgs~Dg~i~iwd~~~ 334 (373)
|++++ +|++++.|+.+++||....+ ..... ..|.. .....++++| ++.+|++|+.||+|+||++..
T Consensus 258 ~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~---~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 258 WGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGV---YEINVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp ECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTT---SCEEEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred EcCCC-EEEEEeCCCEEEEEEcCCCceEEEecccccccc---ceEEEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 99765 89999999999999987653 22221 22222 1234467888 789999999999999999864
No 72
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=2.6e-39 Score=313.73 Aligned_cols=285 Identities=18% Similarity=0.308 Sum_probs=240.0
Q ss_pred ceEEecCccCcEEEEEEcCCCC-EEEEeeCCCcEEEEeCCCCceeeecccccc---ceEEEEEcCC-CCEEEEEeCCCcE
Q 017314 80 CKHKINAHEGGCASILFEYNSA-RLISGGQDKSIKLWDTNTGSLSSTLYGCLG---SVLDLAITHD-NRSVIAASSSNNL 154 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~l~s~s~d~~i 154 (373)
....+.+|...|.++.|+|++. .|++|+.|+.|++||+.+++....+.+|.. .|.+++|+|+ +++|++++.|+.|
T Consensus 152 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 231 (615)
T 1pgu_A 152 SLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI 231 (615)
T ss_dssp EEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCE
T ss_pred cceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeE
Confidence 4567789999999999999998 899999999999999999999999999999 9999999999 9999999999999
Q ss_pred EEEEcCCCeeEEEe-e---cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-----CceeEEEEccC
Q 017314 155 YVWDVNSGRVRHTL-T---GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-----SNCNALAFSMD 225 (373)
Q Consensus 155 ~iwd~~~~~~~~~~-~---~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-----~~~~~~~~~~~ 225 (373)
++||+.+++.+..+ . +|...|.++.|+ ++.++++++.|++|++||++++.++..+..+ ..+.++.+. +
T Consensus 232 ~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 308 (615)
T 1pgu_A 232 SCFDGKSGEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-G 308 (615)
T ss_dssp EEEETTTCCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-E
T ss_pred EEEECCCCCEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-C
Confidence 99999999999998 6 899999999998 6789999999999999999999988888766 346677775 8
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcC---------------------------------CCCEE
Q 017314 226 GQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSR---------------------------------SGNII 272 (373)
Q Consensus 226 g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~---------------------------------~~~~l 272 (373)
+.++++|+.||.|++||+.+++.+..+..|. ..|++++| | ++..|
T Consensus 309 ~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~-~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l 386 (615)
T 1pgu_A 309 NGRIISLSLDGTLNFYELGHDEVLKTISGHN-KGITALTV-NPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEY 386 (615)
T ss_dssp TTEEEEEETTSCEEEEETTEEEEEEEECCCS-SCEEEEET-TTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCC
T ss_pred CCeEEEEECCCCEEEEECCCCcEEEEEeCCC-CCEEEEEe-cCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEE
Confidence 9999999999999999999888777776553 34444444 3 25556
Q ss_pred EEeeCCCeEEEEEccc----------------------------------------------------------------
Q 017314 273 LTSGRDNLHNLFDIRS---------------------------------------------------------------- 288 (373)
Q Consensus 273 ~s~~~d~~i~~~d~~~---------------------------------------------------------------- 288 (373)
++++.|+.+++||+..
T Consensus 387 ~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d 466 (615)
T 1pgu_A 387 SSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEG 466 (615)
T ss_dssp EEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTT
T ss_pred EEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCC
Confidence 6666666666655442
Q ss_pred ----------ccee-eeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEecc-CCccEEEEEEcC-
Q 017314 289 ----------LEVC-GSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE-HTAPVLSCSWSG- 355 (373)
Q Consensus 289 ----------~~~~-~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~-h~~~V~~~~~s~- 355 (373)
.+.. ..+.. .......++++|++++|++|+.||.|++||+.+++.+..+.+ |..+|++++|+|
T Consensus 467 ~~i~~~~~~~~~~~~~~~~~----~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~ 542 (615)
T 1pgu_A 467 NTIQVFKLSDLEVSFDLKTP----LRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPA 542 (615)
T ss_dssp SCEEEEETTEEEEEEECSSC----CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCC
T ss_pred CeEEEEECCCccccccccCC----ccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCc
Confidence 1111 11111 122344578999999999999999999999999999999988 999999999999
Q ss_pred ---------CCCcEEEEeCCCeEEEcC
Q 017314 356 ---------LGKPLASADKNGVVCVWT 373 (373)
Q Consensus 356 ---------~g~~l~s~s~dg~i~iW~ 373 (373)
++++|++++.||.|++|+
T Consensus 543 ~~~~~~~~~~~~~l~~~~~dg~i~iw~ 569 (615)
T 1pgu_A 543 EKGANEEEIEEDLVATGSLDTNIFIYS 569 (615)
T ss_dssp C------CCSCCEEEEEETTSCEEEEE
T ss_pred cccccccccCCCEEEEEcCCCcEEEEE
Confidence 999999999999999995
No 73
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=4e-39 Score=286.82 Aligned_cols=268 Identities=25% Similarity=0.489 Sum_probs=231.0
Q ss_pred HhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecccccc
Q 017314 52 LAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLG 131 (373)
Q Consensus 52 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~ 131 (373)
++....|+.++.|+... ..+...+.+|..+|.+++|+|++++|++|+.|++|++||+.+++.+..+.+|..
T Consensus 38 l~s~~~dg~i~iw~~~~---------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~ 108 (312)
T 4ery_A 38 LASSSADKLIKIWGAYD---------GKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSN 108 (312)
T ss_dssp EEEEETTSCEEEEETTT---------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEEeeCCCeEEEEeCCC---------cccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCC
Confidence 44555666666654322 234567889999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE
Q 017314 132 SVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI 211 (373)
Q Consensus 132 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~ 211 (373)
.|.+++|+|+++++++++.|++|++||+.+++.+..+..|..+|.++.|++ ++.++++|+.|+.|++||++++.++..+
T Consensus 109 ~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 187 (312)
T 4ery_A 109 YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL 187 (312)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCceeeEE
Confidence 999999999999999999999999999999999999999999999999987 6789999999999999999998887766
Q ss_pred eec--CceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEeccccc--ceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q 017314 212 IFH--SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLA--AVTSISLSRSGNIILTSGRDNLHNLFDIR 287 (373)
Q Consensus 212 ~~~--~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~i~~~d~~ 287 (373)
... ..+..++|+|++++|++++.||.|++||+++++.+..+..|... .+......+++.+|++++.|+.+++||+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 188 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 433 34788999999999999999999999999999998888776522 23333445788999999999999999999
Q ss_pred ccceeeeeeecCCeeecCeeeeEECCCCcEEEEEe--CCCcEEEEEcc
Q 017314 288 SLEVCGSLRATGNRVASNWSRSCISPDESYVAAGS--ADGSVYIWSIS 333 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs--~Dg~i~iwd~~ 333 (373)
+.+....+..|...+. .++++|++.+|++++ .|++|++|+..
T Consensus 268 ~~~~~~~~~~h~~~v~----~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 268 TKEIVQKLQGHTDVVI----STACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TCCEEEEECCCSSCEE----EEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CchhhhhhhccCCcEE----EEeecCcCCceEEEEccCCccEEEecCC
Confidence 9988888877765543 468999999999987 69999999863
No 74
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.6e-41 Score=300.18 Aligned_cols=247 Identities=20% Similarity=0.272 Sum_probs=199.4
Q ss_pred EEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc--eeeeccccccceEEEEEcC--CCCEEEEEeCCCcEEEE
Q 017314 82 HKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGS--LSSTLYGCLGSVLDLAITH--DNRSVIAASSSNNLYVW 157 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~--~~~~l~s~s~d~~i~iw 157 (373)
..+.+|.+.|++++|+|+|++|++|+.|++|+|||+.++. ....+.+|.++|.+++|++ ++++|++++.|++|++|
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 3467899999999999999999999999999999998774 4677899999999999986 48899999999999999
Q ss_pred EcCCC--eeEEEeecCCCcEEEEEEeeCC-CCEEEEEeCCCcEEEEEccCCee---eeEEeec-CceeEEEEccC-----
Q 017314 158 DVNSG--RVRHTLTGHTDKVCAVDVSKIS-SRHVVSAAYDRTLKVWDLHKGYC---VNTIIFH-SNCNALAFSMD----- 225 (373)
Q Consensus 158 d~~~~--~~~~~~~~h~~~v~~~~~~~~~-~~~~~s~s~D~~i~vwd~~~~~~---~~~~~~~-~~~~~~~~~~~----- 225 (373)
|++++ +....+.+|...|.+++|+|.. +.++++|+.|++|++||++.+.. ...+..| ..+.+++|+|+
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC--
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcc
Confidence 99987 4667888999999999999853 67899999999999999987532 1222223 34788999997
Q ss_pred ------------CCEEEEEeCCCcEEEEECCCC---eeeEEEecccccceEEEEEcCCC----CEEEEeeCCCeEEEEEc
Q 017314 226 ------------GQTIFSGHIDGNLRLWDIQTG---KLLSEVAAHSLAAVTSISLSRSG----NIILTSGRDNLHNLFDI 286 (373)
Q Consensus 226 ------------g~~l~sg~~dg~i~iwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~----~~l~s~~~d~~i~~~d~ 286 (373)
+.+|++|+.|++|++||++.. +.+..+..|. ..|.+++|+|++ ++|++++.|+++++||+
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~-~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~ 245 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS-DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTC 245 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCS-SCEEEEECCCCSSCSCCEEEEEETTCEEEEEEC
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCC-CceEEEEecCCCCCCCceEEEEcCCCeEEEEEc
Confidence 478999999999999999765 4556677776 789999999987 89999999999999998
Q ss_pred cccc----eeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEcc
Q 017314 287 RSLE----VCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSIS 333 (373)
Q Consensus 287 ~~~~----~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~ 333 (373)
.... ....+..+.. ....++|+|++.+|++|+.||+|+||+..
T Consensus 246 ~~~~~~~~~~~~~~~~~~----~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 246 DDASSNTWSPKLLHKFND----VVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp SSTTCCCCBCCEEEECSS----CEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCccccchhhhhhhcCCC----cEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 7621 1112222322 33457899999999999999999999975
No 75
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.5e-39 Score=296.69 Aligned_cols=241 Identities=25% Similarity=0.441 Sum_probs=210.2
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 168 (373)
..|.+++|+|++++|++|+.|++|++||+.+++....+.+|...|.+++|+|++.+|++++.|++|++||+.++++...+
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE
Confidence 35999999999999999999999999999999999999999999999999999999999999999999999999988777
Q ss_pred ecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe-------ec-CceeEEEEccCCCEEEEEeCCCcEEE
Q 017314 169 TGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII-------FH-SNCNALAFSMDGQTIFSGHIDGNLRL 240 (373)
Q Consensus 169 ~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~-------~~-~~~~~~~~~~~g~~l~sg~~dg~i~i 240 (373)
. |...+.+++++|.++.++++|+.|++|++||++++..+..+. .| ..+.+++|+|+|.+|++|+.||+|++
T Consensus 204 ~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~ 282 (393)
T 1erj_A 204 S-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKL 282 (393)
T ss_dssp E-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred E-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEE
Confidence 6 567899999998778899999999999999999988776652 22 45899999999999999999999999
Q ss_pred EECCCC------------eeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeee
Q 017314 241 WDIQTG------------KLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSR 308 (373)
Q Consensus 241 wd~~~~------------~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 308 (373)
||+++. .+...+.+|. ..|.+++|+|++.+|++++.|+.+++||+.+.+....+..|...+..
T Consensus 283 wd~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~---- 357 (393)
T 1erj_A 283 WNLQNANNKSDSKTPNSGTCEVTYIGHK-DFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVIS---- 357 (393)
T ss_dssp EEC---------------CEEEEEECCS-SCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE----
T ss_pred EECCCCCCcccccCCCCCcceEEEeccc-CcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEE----
Confidence 999763 3344556665 68999999999999999999999999999999888888777665432
Q ss_pred eEEC------CCCcEEEEEeCCCcEEEEEccCc
Q 017314 309 SCIS------PDESYVAAGSADGSVYIWSISKA 335 (373)
Q Consensus 309 ~~~s------~~~~~l~sgs~Dg~i~iwd~~~~ 335 (373)
++++ |++.+|++|+.||+|+||++...
T Consensus 358 v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 358 VAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 4444 57899999999999999998654
No 76
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.6e-40 Score=329.69 Aligned_cols=304 Identities=18% Similarity=0.214 Sum_probs=236.9
Q ss_pred HhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCcee--------
Q 017314 52 LAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLS-------- 123 (373)
Q Consensus 52 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~-------- 123 (373)
++....|+.++.|+.... .+.+.+. |.+.|++++|+|++++|++|+.||+|++||+.++.+.
T Consensus 72 L~S~s~D~~v~lWd~~~~---------~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~ 141 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQ---------KVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQ 141 (902)
T ss_dssp EEEEETTCEEEEEETTTC---------SEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHH
T ss_pred EEEEECcCeEEEEECCCC---------cEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceecccc
Confidence 566677888888765431 2344554 6789999999999999999999999999999988753
Q ss_pred ---eeccccccceEEEEEcCCC-CEEEEEeCCCcEEEEEcCCCeeEEEeecC------------------CCcEEEEEEe
Q 017314 124 ---STLYGCLGSVLDLAITHDN-RSVIAASSSNNLYVWDVNSGRVRHTLTGH------------------TDKVCAVDVS 181 (373)
Q Consensus 124 ---~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~~~~~~~~h------------------~~~v~~~~~~ 181 (373)
..+.+|.++|.+++|+|++ ..+++|+.|++| +||++++++...+.+| ...|.+++|+
T Consensus 142 ~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fs 220 (902)
T 2oaj_A 142 KSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYH 220 (902)
T ss_dssp HHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEEC
T ss_pred ccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEc
Confidence 3456789999999999964 789999999999 9999999998888766 5789999999
Q ss_pred eCCCCEEEEEeCCCcEEEEEccCCeeeeE----------------------------Eee--------------------
Q 017314 182 KISSRHVVSAAYDRTLKVWDLHKGYCVNT----------------------------IIF-------------------- 213 (373)
Q Consensus 182 ~~~~~~~~s~s~D~~i~vwd~~~~~~~~~----------------------------~~~-------------------- 213 (373)
| ++.+|++|+.|++|++||+++++++.. +..
T Consensus 221 p-dg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~ 299 (902)
T 2oaj_A 221 P-NSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISR 299 (902)
T ss_dssp T-TSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTT
T ss_pred C-CCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCC
Confidence 8 588999999999999999865443210 000
Q ss_pred --------------------------------------------------------------c-----------C-----
Q 017314 214 --------------------------------------------------------------H-----------S----- 215 (373)
Q Consensus 214 --------------------------------------------------------------~-----------~----- 215 (373)
+ .
T Consensus 300 ~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~ 379 (902)
T 2oaj_A 300 GDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETM 379 (902)
T ss_dssp SSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEE
T ss_pred CCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEE
Confidence 0 0
Q ss_pred -----------------------ceeE----------------------------------EEEccCCCEEEEEeCCCcE
Q 017314 216 -----------------------NCNA----------------------------------LAFSMDGQTIFSGHIDGNL 238 (373)
Q Consensus 216 -----------------------~~~~----------------------------------~~~~~~g~~l~sg~~dg~i 238 (373)
.+++ ++|+|++++|++|+.|++|
T Consensus 380 ~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtV 459 (902)
T 2oaj_A 380 LYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSV 459 (902)
T ss_dssp ETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEE
T ss_pred ECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcE
Confidence 0000 1124567788889999999
Q ss_pred EEEECCCCeee----EEEe-------cccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce----------------
Q 017314 239 RLWDIQTGKLL----SEVA-------AHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV---------------- 291 (373)
Q Consensus 239 ~iwd~~~~~~~----~~~~-------~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~---------------- 291 (373)
++||+.++... ..+. .|. ..|.+++|+|++++||+++.|++|++||+.+.+.
T Consensus 460 rlWd~~~g~~~~~~~~~~~l~~~~~~~h~-~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~ 538 (902)
T 2oaj_A 460 RIYDASHGDIQDNASFEVNLSRTLNKAKE-LAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNF 538 (902)
T ss_dssp EEEESSCCTTTTTBCEEEEHHHHTTCSSS-CCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------C
T ss_pred EEEECCCccccCCceEEeechhhcCCCCC-CceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceee
Confidence 99998776421 1111 333 6899999999999999999999999999976521
Q ss_pred -----------------------------eeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEE---
Q 017314 292 -----------------------------CGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVR--- 339 (373)
Q Consensus 292 -----------------------------~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~--- 339 (373)
...+..|.. .+..++|+||| +||+|+.||+|+|||+.++..+.
T Consensus 539 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~----~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~ 613 (902)
T 2oaj_A 539 RRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKG----KTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMEN 613 (902)
T ss_dssp CSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSC----SEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eeccccCCccccccccccCCCCCCCccceeEEEEcCCC----cEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEee
Confidence 223333332 34557899999 99999999999999998887654
Q ss_pred --Eec-cCCccEEEEEEc-----CCC---CcEEEEeCCCeEEEcC
Q 017314 340 --TLK-EHTAPVLSCSWS-----GLG---KPLASADKNGVVCVWT 373 (373)
Q Consensus 340 --~l~-~h~~~V~~~~~s-----~~g---~~l~s~s~dg~i~iW~ 373 (373)
.+. +|.+.|++++|| ||| ++|++|+.||+|++|+
T Consensus 614 ~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd 658 (902)
T 2oaj_A 614 IREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYK 658 (902)
T ss_dssp GGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEE
T ss_pred hhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEE
Confidence 233 899999999999 886 8999999999999995
No 77
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1e-40 Score=297.98 Aligned_cols=244 Identities=23% Similarity=0.313 Sum_probs=197.7
Q ss_pred eccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCe--eEEEeecCCCcEEEEEEeeC-CCCEEEEEeCCCcEEEEE
Q 017314 125 TLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR--VRHTLTGHTDKVCAVDVSKI-SSRHVVSAAYDRTLKVWD 201 (373)
Q Consensus 125 ~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~-~~~~~~s~s~D~~i~vwd 201 (373)
.+.+|.+.|++++|+|++++|++|+.|++|+|||+.+++ .+..+.+|.++|.+++|++. .+++|+||+.|++|++||
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd 87 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWR 87 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEEC
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEE
Confidence 456899999999999999999999999999999998874 56789999999999999753 467899999999999999
Q ss_pred ccCCe--eeeEEeec-CceeEEEEccC--CCEEEEEeCCCcEEEEECCCCee---eEEEecccccceEEEEEcCC-----
Q 017314 202 LHKGY--CVNTIIFH-SNCNALAFSMD--GQTIFSGHIDGNLRLWDIQTGKL---LSEVAAHSLAAVTSISLSRS----- 268 (373)
Q Consensus 202 ~~~~~--~~~~~~~~-~~~~~~~~~~~--g~~l~sg~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~----- 268 (373)
++++. +...+..| ..+++++|+|+ |.+|++|+.|++|++||++.+.. ...+..|. ..+.+++|+|+
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHT-IGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSS-SCBCCCEECCCCCC--
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecccc-CCcceEEEccccCCcc
Confidence 98874 44444444 45899999998 88999999999999999987632 23334454 67899999997
Q ss_pred ------------CCEEEEeeCCCeEEEEEcccc---ceeeeeeecCCeeecCeeeeEECCCC----cEEEEEeCCCcEEE
Q 017314 269 ------------GNIILTSGRDNLHNLFDIRSL---EVCGSLRATGNRVASNWSRSCISPDE----SYVAAGSADGSVYI 329 (373)
Q Consensus 269 ------------~~~l~s~~~d~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~----~~l~sgs~Dg~i~i 329 (373)
+++|++++.|+.+++||++.. .....+..|...+ ..++|+|++ .+|++|+.||+|+|
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V----~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWV----RDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCE----EEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCce----EEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 478999999999999999754 3445555555443 347889986 89999999999999
Q ss_pred EEccCc---e-EEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 330 WSISKA---D-IVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 330 wd~~~~---~-~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
|++.+. . ....+.+|...|++++|+|+|++||+++.||.|+||+
T Consensus 243 w~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 243 WTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp EECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred EEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 998762 1 2334567899999999999999999999999999995
No 78
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=8.3e-39 Score=315.22 Aligned_cols=253 Identities=25% Similarity=0.417 Sum_probs=214.8
Q ss_pred cceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEE
Q 017314 79 TCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWD 158 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd 158 (373)
.+.+.+.+|.+.|.+++|+|++++|+||+.|++|+|||+.++.....+.+|...|.+++|+|++++|++++.|++|++||
T Consensus 421 ~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd 500 (694)
T 3dm0_A 421 VAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWN 500 (694)
T ss_dssp EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred cccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEE
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCeeEEEe---ecCCCcEEEEEEeeCC-CCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEEe
Q 017314 159 VNSGRVRHTL---TGHTDKVCAVDVSKIS-SRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGH 233 (373)
Q Consensus 159 ~~~~~~~~~~---~~h~~~v~~~~~~~~~-~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~ 233 (373)
+......... .+|...|.+++|+|.. ...+++|+.|++|++||++++.+..++..|. .+.+++|+|+|++|++|+
T Consensus 501 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~ 580 (694)
T 3dm0_A 501 TLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGG 580 (694)
T ss_dssp TTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEe
Confidence 8765433322 4799999999999853 3589999999999999999998888887664 589999999999999999
Q ss_pred CCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCee-----------
Q 017314 234 IDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRV----------- 302 (373)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~----------- 302 (373)
.||+|++||+++++.+..+..+ ..+.+++|+|++.+|++++ ++.|++||+++...+..+..+....
T Consensus 581 ~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (694)
T 3dm0_A 581 KDGVVLLWDLAEGKKLYSLEAN--SVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAA 657 (694)
T ss_dssp TTSBCEEEETTTTEEEECCBCS--SCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC-------------
T ss_pred CCCeEEEEECCCCceEEEecCC--CcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhcccccccccccccccccc
Confidence 9999999999999988776554 5799999999998887765 5669999999887766654321110
Q ss_pred ----ecCeeeeEECCCCcEEEEEeCCCcEEEEEccC
Q 017314 303 ----ASNWSRSCISPDESYVAAGSADGSVYIWSISK 334 (373)
Q Consensus 303 ----~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~ 334 (373)
......++++|+|++|++|+.||+|+||++..
T Consensus 658 ~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 658 TKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp ---CCCCEEEEEECTTSSEEEEEETTSEEEEEEC--
T ss_pred CCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEeccC
Confidence 01134567999999999999999999999853
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.4e-38 Score=317.09 Aligned_cols=306 Identities=19% Similarity=0.263 Sum_probs=256.5
Q ss_pred HhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecccccc
Q 017314 52 LAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLG 131 (373)
Q Consensus 52 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~ 131 (373)
++....++.++.|+... ......+.+|.++|++++|+|++++|++|+.|+.|++||+.+++....+.+|.+
T Consensus 28 la~~~~~g~v~iwd~~~---------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 98 (814)
T 3mkq_A 28 VLTTLYSGRVEIWNYET---------QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD 98 (814)
T ss_dssp EEEEETTSEEEEEETTT---------TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EEEEeCCCEEEEEECCC---------CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC
Confidence 44445566666665322 234567889999999999999999999999999999999999999999999999
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEcCCC-eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeE
Q 017314 132 SVLDLAITHDNRSVIAASSSNNLYVWDVNSG-RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNT 210 (373)
Q Consensus 132 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~ 210 (373)
.|.+++|+|++.+|++++.|++|++||+.++ .....+.+|...|.+++|+|.++..+++++.|++|++||+.++.....
T Consensus 99 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~ 178 (814)
T 3mkq_A 99 YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFT 178 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEE
T ss_pred CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeE
Confidence 9999999999999999999999999999887 778889999999999999985677999999999999999988877666
Q ss_pred Eeec--CceeEEEEcc--CCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEc
Q 017314 211 IIFH--SNCNALAFSM--DGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDI 286 (373)
Q Consensus 211 ~~~~--~~~~~~~~~~--~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~ 286 (373)
+..+ ..+.+++|+| ++.++++|+.||.|++||+.+++.+..+..|. ..|++++|+|++++|++++.|+.+++||+
T Consensus 179 ~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 179 LTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM-SNVSFAVFHPTLPIIISGSEDGTLKIWNS 257 (814)
T ss_dssp EECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCS-SCEEEEEECSSSSEEEEEETTSCEEEEET
T ss_pred EecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCC-CCEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 6544 5588999999 99999999999999999999999998888876 78999999999999999999999999999
Q ss_pred cccceeeeeeecCCeeecCeeeeEECCCCc--EEEEEeCCCcEEEEEccCce----------EEE---------------
Q 017314 287 RSLEVCGSLRATGNRVASNWSRSCISPDES--YVAAGSADGSVYIWSISKAD----------IVR--------------- 339 (373)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~--~l~sgs~Dg~i~iwd~~~~~----------~~~--------------- 339 (373)
.+.+....+..+...+ ..++++|++. ++++|+ |+.+.+|++..+. .+.
T Consensus 258 ~~~~~~~~~~~~~~~v----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 332 (814)
T 3mkq_A 258 STYKVEKTLNVGLERS----WCIATHPTGRKNYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAV 332 (814)
T ss_dssp TTCSEEEEECCSSSSE----EEEEECTTCGGGEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEE
T ss_pred CCCcEEEEeecCCCcE----EEEEEccCCCceEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeee
Confidence 9988877776655443 3467899987 566655 5568888875422 111
Q ss_pred ------------------EeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 340 ------------------TLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 340 ------------------~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
.+..|...+.+++|+|+|++|++++ ||.+.+|+
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~ 383 (814)
T 3mkq_A 333 IRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYT 383 (814)
T ss_dssp CCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEE
T ss_pred cccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEE
Confidence 1123445678899999999988888 88888884
No 80
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=4.9e-39 Score=296.55 Aligned_cols=278 Identities=19% Similarity=0.256 Sum_probs=229.8
Q ss_pred EEEEEEcCCCCEE-EEeeCCCcEEEEeCCCC----ceeeeccccccceEEEEEcC-CCCEEEEEeCCCcEEEEEcCCC--
Q 017314 91 CASILFEYNSARL-ISGGQDKSIKLWDTNTG----SLSSTLYGCLGSVLDLAITH-DNRSVIAASSSNNLYVWDVNSG-- 162 (373)
Q Consensus 91 v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~-- 162 (373)
...++++++...+ ++|+.||.|+|||+... .....+.+|.+.|.+++|+| ++++|++++.|++|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 3457788876544 45789999999999654 23456778999999999999 8999999999999999999987
Q ss_pred -----eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE--eec-CceeEEEEccCCCEEEEEeC
Q 017314 163 -----RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI--IFH-SNCNALAFSMDGQTIFSGHI 234 (373)
Q Consensus 163 -----~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~--~~~-~~~~~~~~~~~g~~l~sg~~ 234 (373)
+++..+.+|...|.+++|+|...+++++|+.|++|++||+.++.++..+ ..| ..+.+++|+|++.+|++|+.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 6678899999999999999865579999999999999999999988887 333 45899999999999999999
Q ss_pred CCcEEEEECCCCeeeEEE-ecccccceEEEEEcCCCCEEEEe---eCCCeEEEEEccccce-eeeeeecCCeeecCeeee
Q 017314 235 DGNLRLWDIQTGKLLSEV-AAHSLAAVTSISLSRSGNIILTS---GRDNLHNLFDIRSLEV-CGSLRATGNRVASNWSRS 309 (373)
Q Consensus 235 dg~i~iwd~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~---~~d~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~ 309 (373)
||.|++||+++++.+..+ ..|....+.++.|+|++++|+++ +.|+.+++||+++.+. ....... .......+
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~---~~~~v~~~ 273 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD---TSSGVLLP 273 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC---CCSSCEEE
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEecc---CCCceeEE
Confidence 999999999999999888 56664458999999999999999 7999999999987654 2222111 11223446
Q ss_pred EECCCCcEEE-EEeCCCcEEEEEccCceE-EEEecc--CCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 310 CISPDESYVA-AGSADGSVYIWSISKADI-VRTLKE--HTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 310 ~~s~~~~~l~-sgs~Dg~i~iwd~~~~~~-~~~l~~--h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+++|++.+|+ +|+.||.|++||+.+++. +..+.. |..+|.+++|+|++.++++ .++.+++|+
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYK 339 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEE
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEE
Confidence 7899999986 566899999999998874 555544 5689999999999998875 567899984
No 81
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-38 Score=286.04 Aligned_cols=254 Identities=18% Similarity=0.258 Sum_probs=211.1
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCC--CCceeeeccccccceEEEEEcCC--CCEEEEEeCCCcEE
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTN--TGSLSSTLYGCLGSVLDLAITHD--NRSVIAASSSNNLY 155 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~d~~i~ 155 (373)
+...+.+|.+.|++++|+|++++|++|+.|++|++||+. ++.....+.+|.+.|.+++|+++ +++|++++.|++|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 345678999999999999999999999999999999998 56677888999999999999987 89999999999999
Q ss_pred EEEcCCCe--eEEEeecCCCcEEEEEEeeCC-CCEEEEEeCCCcEEEEEccCCeeee--EEee-cCceeEEEEcc-----
Q 017314 156 VWDVNSGR--VRHTLTGHTDKVCAVDVSKIS-SRHVVSAAYDRTLKVWDLHKGYCVN--TIIF-HSNCNALAFSM----- 224 (373)
Q Consensus 156 iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~-~~~~~s~s~D~~i~vwd~~~~~~~~--~~~~-~~~~~~~~~~~----- 224 (373)
+||+.+++ ....+.+|...|.+++|+|.. +.++++++.|++|++||+..+.... .+.. ...+.+++|+|
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99999987 778888999999999999843 7899999999999999998874322 2323 34689999999
Q ss_pred --------CCCEEEEEeCCCcEEEEECCCCe----eeEEEecccccceEEEEEcCC---CCEEEEeeCCCeEEEEEcccc
Q 017314 225 --------DGQTIFSGHIDGNLRLWDIQTGK----LLSEVAAHSLAAVTSISLSRS---GNIILTSGRDNLHNLFDIRSL 289 (373)
Q Consensus 225 --------~g~~l~sg~~dg~i~iwd~~~~~----~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~~d~~~~ 289 (373)
++.++++|+.||.|++||++++. ....+..|. ..|.+++|+|+ +++|++++.|+.+++||++..
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCS-SCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEeccc-CcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 69999999999999999998764 334555665 78999999999 899999999999999999875
Q ss_pred ceeeeee-ecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccC
Q 017314 290 EVCGSLR-ATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISK 334 (373)
Q Consensus 290 ~~~~~~~-~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~ 334 (373)
....... ............++++|+|.+|++|+.||.|++|++..
T Consensus 242 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 242 QGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp TSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 3211111 11111223344578999999999999999999999874
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-37 Score=283.45 Aligned_cols=249 Identities=21% Similarity=0.336 Sum_probs=207.3
Q ss_pred CceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC--CCeeEEEeecCCCcEEEEEEeeC-CCCEEEEEeCCCc
Q 017314 120 GSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN--SGRVRHTLTGHTDKVCAVDVSKI-SSRHVVSAAYDRT 196 (373)
Q Consensus 120 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~-~~~~~~s~s~D~~ 196 (373)
|++...+.+|.+.|.+++|+|++++|++++.|++|++||+. +++....+.+|...|.+++|++. ++.++++|+.|++
T Consensus 1 G~~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 1 GSMVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp ----CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred CCccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 34567788999999999999999999999999999999998 56778889999999999999763 2789999999999
Q ss_pred EEEEEccCCe--eeeEEeec-CceeEEEEccC--CCEEEEEeCCCcEEEEECCCCee--eEEEecccccceEEEEEcC--
Q 017314 197 LKVWDLHKGY--CVNTIIFH-SNCNALAFSMD--GQTIFSGHIDGNLRLWDIQTGKL--LSEVAAHSLAAVTSISLSR-- 267 (373)
Q Consensus 197 i~vwd~~~~~--~~~~~~~~-~~~~~~~~~~~--g~~l~sg~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~-- 267 (373)
|++||+.++. ....+..+ ..+.+++|+|+ +.+|++++.||.|++||++++.. ...+..|. ..|.+++|+|
T Consensus 81 v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~-~~v~~~~~~~~~ 159 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA-IGVNSASWAPAT 159 (379)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT-TCEEEEEECCCC
T ss_pred EEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC-CceEEEEEcCcc
Confidence 9999999886 44455434 46899999999 99999999999999999988743 33444554 7899999999
Q ss_pred -----------CCCEEEEeeCCCeEEEEEccccce----eeeeeecCCeeecCeeeeEECCC---CcEEEEEeCCCcEEE
Q 017314 268 -----------SGNIILTSGRDNLHNLFDIRSLEV----CGSLRATGNRVASNWSRSCISPD---ESYVAAGSADGSVYI 329 (373)
Q Consensus 268 -----------~~~~l~s~~~d~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~---~~~l~sgs~Dg~i~i 329 (373)
++.+|++++.|+.+++||++.... ...+..+... +..++++|+ +.+|++|+.||.|++
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~----v~~~~~sp~~~~~~~l~s~~~dg~i~i 235 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW----VRDVAWSPTVLLRSYLASVSQDRTCII 235 (379)
T ss_dssp ----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC----EEEEEECCCCSSSEEEEEEETTSCEEE
T ss_pred ccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCc----EeEEEECCCCCCCCeEEEEeCCCEEEE
Confidence 699999999999999999986543 2334444433 345789999 899999999999999
Q ss_pred EEccCce---EEEE--eccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 330 WSISKAD---IVRT--LKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 330 wd~~~~~---~~~~--l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
||+.++. .... ...|...|++++|+|+|++|++++.||.|++|+
T Consensus 236 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 236 WTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp EEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred EeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 9998864 2223 334889999999999999999999999999995
No 83
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.6e-37 Score=274.66 Aligned_cols=279 Identities=21% Similarity=0.331 Sum_probs=231.6
Q ss_pred HHhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccc
Q 017314 51 KLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCL 130 (373)
Q Consensus 51 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 130 (373)
.+++.+.|+.++.|+.... ......+.+.+.+|...|.+++|+|++++|++|+.|+.|++|+............+.
T Consensus 53 ~l~S~s~D~~i~vWd~~~~----~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~ 128 (340)
T 4aow_A 53 MILSASRDKTIIMWKLTRD----ETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT 128 (340)
T ss_dssp EEEEEETTSCEEEEEECCS----SSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred EEEEEcCCCeEEEEECCCC----CcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCC
Confidence 4677888898988875432 112233567889999999999999999999999999999999999998888888888
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCee-EEEeecCCCcEEEEEEeeCC-CCEEEEEeCCCcEEEEEccCCeee
Q 017314 131 GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRV-RHTLTGHTDKVCAVDVSKIS-SRHVVSAAYDRTLKVWDLHKGYCV 208 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~-~~~~~s~s~D~~i~vwd~~~~~~~ 208 (373)
..+....+++++..|++++.|+.+++||+..... ...+.+|...+..+++++.. ...+++++.|++|++||++++.+.
T Consensus 129 ~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~ 208 (340)
T 4aow_A 129 KDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK 208 (340)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE
T ss_pred CceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee
Confidence 8999999999999999999999999999876543 44567899999999988643 456789999999999999999988
Q ss_pred eEEeecC-ceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q 017314 209 NTIIFHS-NCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIR 287 (373)
Q Consensus 209 ~~~~~~~-~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~ 287 (373)
..+..|. .+++++|+|++++|++|+.||.|++||+++.+.+..+..+ ..+.++.|+|++.++ +++.|+.+++||++
T Consensus 209 ~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~ 285 (340)
T 4aow_A 209 TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG--DIINALCFSPNRYWL-CAATGPSIKIWDLE 285 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS--SCEEEEEECSSSSEE-EEEETTEEEEEETT
T ss_pred eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC--ceEEeeecCCCCcee-eccCCCEEEEEECC
Confidence 8877664 5899999999999999999999999999999998888765 579999999987655 56679999999998
Q ss_pred ccceeeeeeecC-----CeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCce
Q 017314 288 SLEVCGSLRATG-----NRVASNWSRSCISPDESYVAAGSADGSVYIWSISKAD 336 (373)
Q Consensus 288 ~~~~~~~~~~~~-----~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~ 336 (373)
.......+.... ......+..++|+|+|++|++|+.||.|+|||+.+|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 286 GKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp TTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred CCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 876665554221 1122234557899999999999999999999999885
No 84
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-39 Score=303.81 Aligned_cols=266 Identities=12% Similarity=0.069 Sum_probs=202.9
Q ss_pred ceEEecCccCcEEEEEEcCCC---------CEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeC
Q 017314 80 CKHKINAHEGGCASILFEYNS---------ARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASS 150 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~---------~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~ 150 (373)
+...+. +.+.|.+++|+|++ ++||+|+.++.. ...+|++..+++++.
T Consensus 126 ~~~~~~-~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~-----------------------~~~~~~~~~laS~s~ 181 (524)
T 2j04_B 126 RGFIYN-VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMD-----------------------EPLNEHLEMFDKEKH 181 (524)
T ss_dssp CEEEEE-CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC-----------------------------------------
T ss_pred ceEEEE-CCCceeEEEecccCCCCccCcCCeEEEEEEecccC-----------------------CccchhhhhhccCCC
Confidence 333444 67899999999987 789998876430 013688899999999
Q ss_pred CCcEEEEEcCCCee----EEEeecCCCcEEEEEEeeC-----CCCEEEEEeCCCcEEEEEccCCeee-----------eE
Q 017314 151 SNNLYVWDVNSGRV----RHTLTGHTDKVCAVDVSKI-----SSRHVVSAAYDRTLKVWDLHKGYCV-----------NT 210 (373)
Q Consensus 151 d~~i~iwd~~~~~~----~~~~~~h~~~v~~~~~~~~-----~~~~~~s~s~D~~i~vwd~~~~~~~-----------~~ 210 (373)
|++|+|||+.+++. ..++.+|.+.|..++|+|. ++.+|++++.|++|++||+..+.+. .+
T Consensus 182 D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~ 261 (524)
T 2j04_B 182 SSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLT 261 (524)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEE
T ss_pred CceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEE
Confidence 99999999987764 2456788899999999984 2569999999999999999765321 23
Q ss_pred Eeec-CceeEEEEccCCCEEEEEeCCCcEEEEECCCCe-eeEEEecccccceEEE--EEcCCC-CEEEEeeCCCeEEEEE
Q 017314 211 IIFH-SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGK-LLSEVAAHSLAAVTSI--SLSRSG-NIILTSGRDNLHNLFD 285 (373)
Q Consensus 211 ~~~~-~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~-~~~~~~~~~~~~v~~~--~~~~~~-~~l~s~~~d~~i~~~d 285 (373)
+..| ..+.+++|+|++ .|++|+.||+|++||++++. ....+..|. ..|+++ .|+|++ ++|++++.|+++++||
T Consensus 262 l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~-~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 262 LSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHD-SYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp ECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSS-SCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred EEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeeccc-ccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 3334 458999999865 89999999999999999764 344567776 789999 578888 8999999999999999
Q ss_pred ccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeC
Q 017314 286 IRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADK 365 (373)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~ 365 (373)
+++.+....+..+.... ....++|+|++..|++++.|++|++||+.++.++..+.+|.++|++|+|||+|++|++||.
T Consensus 340 ~~~~~~~~~~~~~~~~~--~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~ 417 (524)
T 2j04_B 340 PKDIATTKTTVSRFRGS--NLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSA 417 (524)
T ss_dssp GGGHHHHCEEEEECSCC--SCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEET
T ss_pred CCCCCcccccccccccC--cccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEEC
Confidence 99877665555443211 1234789999999999999999999999999888889999999999999999999999999
Q ss_pred CCeEEEcC
Q 017314 366 NGVVCVWT 373 (373)
Q Consensus 366 dg~i~iW~ 373 (373)
||+|++|+
T Consensus 418 Dgtv~lwd 425 (524)
T 2j04_B 418 DGSLIITN 425 (524)
T ss_dssp TTEEECCB
T ss_pred CCEEEEEe
Confidence 99999995
No 85
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-37 Score=286.52 Aligned_cols=281 Identities=14% Similarity=0.149 Sum_probs=235.4
Q ss_pred HHHhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCC----C---CEEEEeeCCCcEEEEeCCCCce
Q 017314 50 EKLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYN----S---ARLISGGQDKSIKLWDTNTGSL 122 (373)
Q Consensus 50 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~---~~l~s~s~D~~v~iwd~~~~~~ 122 (373)
..++....|+.++.|+..... ...+..+...+.+|..+|++++|+++ + .+|++|+.|+.|++||+.++..
T Consensus 27 ~~l~s~~~dg~i~iw~~~~~~---~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~ 103 (397)
T 1sq9_A 27 SFTVSCSGDGYLKVWDNKLLD---NENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDE 103 (397)
T ss_dssp SEEEEEETTSEEEEEESBCCT---TCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTT
T ss_pred CeEEEEcCCCEEEEEECCCcc---cccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcc
Confidence 346667788888887654321 11233457788899999999999999 9 9999999999999999998886
Q ss_pred -----eeecccc-----ccceEEEEEc----CCCCE-EEEEeCCCcEEEEEcCC------CeeEE-----Ee-------e
Q 017314 123 -----SSTLYGC-----LGSVLDLAIT----HDNRS-VIAASSSNNLYVWDVNS------GRVRH-----TL-------T 169 (373)
Q Consensus 123 -----~~~~~~~-----~~~v~~~~~~----~~~~~-l~s~s~d~~i~iwd~~~------~~~~~-----~~-------~ 169 (373)
...+..| ...|.+++|+ |++.+ |++++.|+.|++||+.+ ++.+. .+ .
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (397)
T 1sq9_A 104 TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPM 183 (397)
T ss_dssp TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSS
T ss_pred cccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeecccc
Confidence 7788888 5899999999 99999 99999999999999998 66555 67 4
Q ss_pred cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEee-------cCceeEEEEccCCCEEEEEeCC---CcEE
Q 017314 170 GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF-------HSNCNALAFSMDGQTIFSGHID---GNLR 239 (373)
Q Consensus 170 ~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~-------~~~~~~~~~~~~g~~l~sg~~d---g~i~ 239 (373)
.|...|.+++|+|. + .+++++.|+.|++||++++.++..+.. ...+.+++|+|++.+|++++.| |.|+
T Consensus 184 ~~~~~i~~~~~~~~-~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~ 261 (397)
T 1sq9_A 184 TPSQFATSVDISER-G-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 261 (397)
T ss_dssp SSCCCCCEEEECTT-S-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEE
T ss_pred CCCCCceEEEECCC-c-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEE
Confidence 48999999999984 5 999999999999999999998888876 4569999999999999999999 9999
Q ss_pred EEECCCCeeeEEEec-------------ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeee------ecC-
Q 017314 240 LWDIQTGKLLSEVAA-------------HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLR------ATG- 299 (373)
Q Consensus 240 iwd~~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~------~~~- 299 (373)
+||+++++.+..+.. |. ..|.+++|+|++++|++++.|+.+++||+++.+....+. .+.
T Consensus 262 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 340 (397)
T 1sq9_A 262 LYETEFGERIGSLSVPTHSSQASLGEFAHS-SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEE 340 (397)
T ss_dssp EEETTTCCEEEEECBC--------CCBSBS-SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGG
T ss_pred EEECCCCcccceeccCcccccccccccccC-CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchh
Confidence 999999999988887 65 789999999999999999999999999999988888877 430
Q ss_pred ----------CeeecCeeeeEECCCC----------cEEEEEeCCCcEEEEEccCce
Q 017314 300 ----------NRVASNWSRSCISPDE----------SYVAAGSADGSVYIWSISKAD 336 (373)
Q Consensus 300 ----------~~~~~~~~~~~~s~~~----------~~l~sgs~Dg~i~iwd~~~~~ 336 (373)
......+..++++|++ .+|++|+.||.|++|++.+++
T Consensus 341 ~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 341 DILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp GCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred hhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 0002334457899998 799999999999999998763
No 86
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-38 Score=292.84 Aligned_cols=268 Identities=15% Similarity=0.177 Sum_probs=216.6
Q ss_pred EcCCCCEEEEeeCCCcEEEEeCCCCceeeec-cccccceEEEEEcC-CCCEEEEEeCCCcEEEEEcCC---Ce---eEEE
Q 017314 96 FEYNSARLISGGQDKSIKLWDTNTGSLSSTL-YGCLGSVLDLAITH-DNRSVIAASSSNNLYVWDVNS---GR---VRHT 167 (373)
Q Consensus 96 ~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~---~~---~~~~ 167 (373)
|++++..+++++ .|+ .+++.+..+ .+|.+.|++++|+| ++.+|++|+.|++|+|||+.+ +. ....
T Consensus 35 f~~~~~~~~~~~------~w~-~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~ 107 (437)
T 3gre_A 35 FGPIQEIVRSPN------MGN-LRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLT 107 (437)
T ss_dssp GCCCCCCCCCCC------GGG-CCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEE
T ss_pred cCCccccccccc------ccc-ccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeee
Confidence 678888887766 388 456777777 88999999999999 999999999999999999876 43 2333
Q ss_pred eecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEcc---CCeeeeEEeec-------------CceeEEE--EccCCCEE
Q 017314 168 LTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLH---KGYCVNTIIFH-------------SNCNALA--FSMDGQTI 229 (373)
Q Consensus 168 ~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~---~~~~~~~~~~~-------------~~~~~~~--~~~~g~~l 229 (373)
+ +|...|.+++|++ ++.++++|+.|++|++||+. .+........+ ..+.++. ++|++.+|
T Consensus 108 ~-~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l 185 (437)
T 3gre_A 108 Y-DCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLL 185 (437)
T ss_dssp E-ECSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEE
T ss_pred c-cCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEE
Confidence 3 5999999999997 67899999999999999995 55444333222 2244444 56789999
Q ss_pred EEEeCCCcEEEEECCCCeeeEEEecc-cccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeee-ecCCeeecCee
Q 017314 230 FSGHIDGNLRLWDIQTGKLLSEVAAH-SLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLR-ATGNRVASNWS 307 (373)
Q Consensus 230 ~sg~~dg~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~ 307 (373)
++|+.||.|++||+++++.+..+..+ +...|++++|+|++++|++++.|+.+++||++..+....+. .+...+.....
T Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred EEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 99999999999999999999998873 33799999999999999999999999999999988777665 33333322100
Q ss_pred eeEECCCCcEEEEEeCCCcEEEEEccCceEEEEecc--------------------------CCccEEEEEEcCCCCcEE
Q 017314 308 RSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE--------------------------HTAPVLSCSWSGLGKPLA 361 (373)
Q Consensus 308 ~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~--------------------------h~~~V~~~~~s~~g~~l~ 361 (373)
...++|++.+|++|+.||.|++||+.+++.+..+.+ |..+|++++|+ ++++|+
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~ 344 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILL 344 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEE
Confidence 013457889999999999999999999998877764 55668889999 779999
Q ss_pred EEeCCCeEEEcC
Q 017314 362 SADKNGVVCVWT 373 (373)
Q Consensus 362 s~s~dg~i~iW~ 373 (373)
+++.||.|++|+
T Consensus 345 s~~~d~~i~~wd 356 (437)
T 3gre_A 345 TDEATSSIVMFS 356 (437)
T ss_dssp EEGGGTEEEEEE
T ss_pred ecCCCCeEEEEE
Confidence 999999999995
No 87
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.7e-38 Score=282.47 Aligned_cols=265 Identities=10% Similarity=0.055 Sum_probs=212.5
Q ss_pred EEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC---------CCeeE
Q 017314 95 LFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN---------SGRVR 165 (373)
Q Consensus 95 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~---------~~~~~ 165 (373)
.+.+++..|++|+.|++|++||+.+++.+..+. ...|.++.++|+ +++++.|++|++|+.. +++.+
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 344678899999999999999999998877765 466777888887 9999999999999765 45544
Q ss_pred EEee-cCCCcEEEEEEee-CCCCEEEEEeCCCcEEEEEccCCeeeeEEeec--CceeEEEEccCCCEEEEEeCCCcEEEE
Q 017314 166 HTLT-GHTDKVCAVDVSK-ISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH--SNCNALAFSMDGQTIFSGHIDGNLRLW 241 (373)
Q Consensus 166 ~~~~-~h~~~v~~~~~~~-~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~sg~~dg~i~iw 241 (373)
..+. +|.++|.+++++| ..++++++|+.|++|++||++++.+......+ ..+.+++|+|+|.+|++|+.||.|++|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 4444 7778999999987 24678999999999999999999886655333 358999999999999999999999999
Q ss_pred ECCCCeee-EEEec-ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeee---cCCeeecCeeeeEECCCCc
Q 017314 242 DIQTGKLL-SEVAA-HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRA---TGNRVASNWSRSCISPDES 316 (373)
Q Consensus 242 d~~~~~~~-~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~---~~~~~~~~~~~~~~s~~~~ 316 (373)
|+++++.+ ..+.. |. ..|++++|+|++.+|++++.+ .+++||+++.+....+.. +...+.. ..++++|+|+
T Consensus 198 d~~~~~~~~~~~~~~h~-~~v~~l~fs~~g~~l~s~~~~-~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~ 273 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEE-AKIKEVKFADNGYWMVVECDQ-TVVCFDLRKDVGTLAYPTYTIPEFKTGT--VTYDIDDSGK 273 (343)
T ss_dssp ESSCTTSCCEECCCCTT-SCEEEEEECTTSSEEEEEESS-BEEEEETTSSTTCBSSCCCBC-----CC--EEEEECTTSS
T ss_pred ECCCCCCCccEEeccCC-CCEEEEEEeCCCCEEEEEeCC-eEEEEEcCCCCcceeecccccccccccc--eEEEECCCCC
Confidence 99999887 77777 55 899999999999999999954 999999998776554432 1111111 2478999999
Q ss_pred EEEEEeC-CCcEEEEEccCceEEEEeccCCccEEEEEEcC---CCCcEEEEeCCCeEEEc
Q 017314 317 YVAAGSA-DGSVYIWSISKADIVRTLKEHTAPVLSCSWSG---LGKPLASADKNGVVCVW 372 (373)
Q Consensus 317 ~l~sgs~-Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~---~g~~l~s~s~dg~i~iW 372 (373)
+|++|+. |+.|+||++.+....-.. .++..+.|+| +++.|++++.||.+.++
T Consensus 274 ~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 274 NMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp EEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred EEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEE
Confidence 9999998 999999999665432222 5788899999 88999999999998875
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.4e-36 Score=277.53 Aligned_cols=248 Identities=21% Similarity=0.313 Sum_probs=209.9
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC-CCee
Q 017314 86 AHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN-SGRV 164 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~-~~~~ 164 (373)
.|.+.|++++|+|++.+|++|+.||.|++||+.+++....+.+|...|.+++| ++..+++++.|+.|++||+. .+..
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~ 209 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQ 209 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcce
Confidence 38899999999999999999999999999999999999999999999999999 56799999999999999998 5677
Q ss_pred EEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCC-EEEEEe--CCCcEEE
Q 017314 165 RHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQ-TIFSGH--IDGNLRL 240 (373)
Q Consensus 165 ~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~-~l~sg~--~dg~i~i 240 (373)
...+.+|...|.+++|+| ++.++++|+.|++|++||++++.+...+..+ ..+.+++|+|++. ++++|+ .|+.|++
T Consensus 210 ~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 210 IGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp EEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred eeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 889999999999999998 6889999999999999999998888777655 4589999999765 555654 7999999
Q ss_pred EECCCCeeeEEEecccccceEEEEEcCCCCEEEEe--eCCCeEEEEEccccceeee--eeecCCeeecCeeeeEECCCCc
Q 017314 241 WDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTS--GRDNLHNLFDIRSLEVCGS--LRATGNRVASNWSRSCISPDES 316 (373)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~--~~d~~i~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~s~~~~ 316 (373)
||+++++.+..+..+ ..+.+++|+|++++++++ +.|+.+++||+.+.+.... +..+...+ ..++++|+|.
T Consensus 289 ~d~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v----~~~~~s~dg~ 362 (401)
T 4aez_A 289 WNAATGARVNTVDAG--SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRV----LYSALSPDGR 362 (401)
T ss_dssp EETTTCCEEEEEECS--SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCC----CEEEECTTSS
T ss_pred EECCCCCEEEEEeCC--CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCE----EEEEECCCCC
Confidence 999999988888644 579999999999999994 4899999999988544433 33444333 3478999999
Q ss_pred EEEEEeCCCcEEEEEccCceEEEEec
Q 017314 317 YVAAGSADGSVYIWSISKADIVRTLK 342 (373)
Q Consensus 317 ~l~sgs~Dg~i~iwd~~~~~~~~~l~ 342 (373)
+|++|+.||.|++|++.+++.+....
T Consensus 363 ~l~s~~~dg~i~iw~~~~~~~~~~~~ 388 (401)
T 4aez_A 363 ILSTAASDENLKFWRVYDGDHVKRPI 388 (401)
T ss_dssp EEEEECTTSEEEEEECCC--------
T ss_pred EEEEEeCCCcEEEEECCCCccccccc
Confidence 99999999999999999988776543
No 89
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.9e-38 Score=290.56 Aligned_cols=256 Identities=15% Similarity=0.178 Sum_probs=183.7
Q ss_pred cCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCce-----eeeccccccceEEEEEcC--------CCCEEEEEeCC
Q 017314 85 NAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSL-----SSTLYGCLGSVLDLAITH--------DNRSVIAASSS 151 (373)
Q Consensus 85 ~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~-----~~~~~~~~~~v~~~~~~~--------~~~~l~s~s~d 151 (373)
..|.+.+....+++++..|++|+.|++|||||..++.. ...+.+|.+.|.+++|+| |+++|++++.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 86 NLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp C----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred cccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 34555566666777888999999999999999988754 345789999999999998 88999999999
Q ss_pred CcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEee------------------
Q 017314 152 NNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF------------------ 213 (373)
Q Consensus 152 ~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~------------------ 213 (373)
++|+|||+.++.+...+.+|..+|.+++|+|.+..++++|+.|++|++||++++........
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~ 245 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLV 245 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC
T ss_pred CeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccce
Confidence 99999999998888888899999999999996667899999999999999988754332211
Q ss_pred --------cCceeEEEEc-cCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEE
Q 017314 214 --------HSNCNALAFS-MDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLF 284 (373)
Q Consensus 214 --------~~~~~~~~~~-~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~ 284 (373)
...+.++.|+ |+|..|++++.|+++++||+.+++....+..+. ..+..+.+.|+.+.+...
T Consensus 246 ~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~--------- 315 (393)
T 4gq1_A 246 NTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDST-MKLGPKNLLPNVQGISLF--------- 315 (393)
T ss_dssp ------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSS---------
T ss_pred eeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeec-CccccEEEcccccccccc---------
Confidence 1235677776 799999999999999999999888777666654 455556555553222111
Q ss_pred EccccceeeeeeecCCeeecCeeeeEEC--CCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEE
Q 017314 285 DIRSLEVCGSLRATGNRVASNWSRSCIS--PDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLAS 362 (373)
Q Consensus 285 d~~~~~~~~~~~~~~~~~~~~~~~~~~s--~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s 362 (373)
.... ..+++ +++.++++|+.||+|++||+.+++....+.+|..+|.+++|||||++||+
T Consensus 316 --------------~~~~-----~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~ 376 (393)
T 4gq1_A 316 --------------PSLL-----GACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAI 376 (393)
T ss_dssp --------------CCSS-----CCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEE
T ss_pred --------------Ccce-----eEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 0000 11233 35668889999999999999999998888899999999999999999999
Q ss_pred EeCCCeE
Q 017314 363 ADKNGVV 369 (373)
Q Consensus 363 ~s~dg~i 369 (373)
++.||.+
T Consensus 377 as~~Gv~ 383 (393)
T 4gq1_A 377 ATEGSVL 383 (393)
T ss_dssp EESSEEE
T ss_pred EeCCCeE
Confidence 9988864
No 90
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.6e-36 Score=277.81 Aligned_cols=243 Identities=15% Similarity=0.198 Sum_probs=204.2
Q ss_pred cCccCcEEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCceeeeccc---cccceEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 017314 85 NAHEGGCASILFEY-NSARLISGGQDKSIKLWDTNTGSLSSTLYG---CLGSVLDLAITHDNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 85 ~~h~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 160 (373)
.+|.+.|.+++|+| ++.+|++|+.|++|++||+.+ .....+.. |...|.+++|+|++++|++++.|+.|++||+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~- 192 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL- 192 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-
Confidence 47999999999999 789999999999999999986 44444443 4478999999999999999999999999999
Q ss_pred CCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC----CeeeeEEeecCceeEEEEcc-CCCEEEEEeCC
Q 017314 161 SGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK----GYCVNTIIFHSNCNALAFSM-DGQTIFSGHID 235 (373)
Q Consensus 161 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~----~~~~~~~~~~~~~~~~~~~~-~g~~l~sg~~d 235 (373)
+++.+..+.+|...|.+++|+|....++++|+.|++|++||+++ +.++..+.+...+.+++|+| ++.+|++++.|
T Consensus 193 ~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d 272 (383)
T 3ei3_B 193 DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQR 272 (383)
T ss_dssp TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESS
T ss_pred CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCC
Confidence 57788899999999999999985444999999999999999997 66777676566799999999 99999999999
Q ss_pred CcEEEEECCCCeeeEEEeccc----------------ccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecC
Q 017314 236 GNLRLWDIQTGKLLSEVAAHS----------------LAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATG 299 (373)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~ 299 (373)
+.|++||+++++.+..+..|. ...+..++++|++++ +++.|+.+++||+.+.+.+..+..+.
T Consensus 273 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~ 350 (383)
T 3ei3_B 273 NEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPN 350 (383)
T ss_dssp SEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTT
T ss_pred CcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCC
Confidence 999999999888776666442 134555777788777 88899999999999988888776543
Q ss_pred CeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccC
Q 017314 300 NRVASNWSRSCISPDESYVAAGSADGSVYIWSISK 334 (373)
Q Consensus 300 ~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~ 334 (373)
. ...+..++|+|++.+|++|+ ||.|+|||+.+
T Consensus 351 ~--~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 351 A--AGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp B--CSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred C--CceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 1 11223458999999999997 99999999864
No 91
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.6e-36 Score=275.13 Aligned_cols=276 Identities=13% Similarity=0.153 Sum_probs=212.2
Q ss_pred eEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEE-EEEeCCCcEEEEEc
Q 017314 81 KHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSV-IAASSSNNLYVWDV 159 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~d~~i~iwd~ 159 (373)
.+.+.+|...|.+++|+|||++|++|+.|+ ++|||++++....... ...+..+++.++++.+ ++++.|++|++||+
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~ 88 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQE--MRHLSKVRMLHRTNYVAFVTGVKEVVHIWDD 88 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEE--CSCCCEEEECTTSSEEEEECSSTTEEEEEET
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeee--cCCeEEEEEcCCCCEEEEEECCccEEEEEEC
Confidence 345678999999999999999999988775 7899998876554432 2347778888888877 56778899999999
Q ss_pred CCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCC-eeeeEEeecCceeEEEEccCCCEEEE--EeCCC
Q 017314 160 NSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKG-YCVNTIIFHSNCNALAFSMDGQTIFS--GHIDG 236 (373)
Q Consensus 160 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~-~~~~~~~~~~~~~~~~~~~~g~~l~s--g~~dg 236 (373)
.+++++..+. |...|.++.+++ ..++.+ .|++|++||+.++ +.+.++.. ....+++++ .+++. |+.||
T Consensus 89 ~~~~~~~~~~-~~~~v~~v~~~~---~~~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~--~~la~~sg~~~g 159 (355)
T 3vu4_A 89 VKKQDVSRIK-VDAPVKDLFLSR---EFIVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN--GLLVYSNEFNLG 159 (355)
T ss_dssp TTTEEEEEEE-CSSCEEEEEECS---SEEEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET--TEEEEEESSCTT
T ss_pred CCCcEEEEEE-CCCceEEEEEcC---CEEEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc--cEEEEeCCCcCc
Confidence 9999998887 667899998865 234443 4889999999987 65555544 444566777 55554 68999
Q ss_pred cEEEEECCCCe----------------eeEEEecccccceEEEEEcCCCCEEEEeeCCCe-EEEEEccccceeeeee-e-
Q 017314 237 NLRLWDIQTGK----------------LLSEVAAHSLAAVTSISLSRSGNIILTSGRDNL-HNLFDIRSLEVCGSLR-A- 297 (373)
Q Consensus 237 ~i~iwd~~~~~----------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~-i~~~d~~~~~~~~~~~-~- 297 (373)
.|++||+++++ .+..+..|. ..|++++|+|++++|++++.|++ +++||+++.+....+. +
T Consensus 160 ~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~-~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~ 238 (355)
T 3vu4_A 160 QIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT-NPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGL 238 (355)
T ss_dssp CEEEEECCC------------------CCEEECCCS-SCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTT
T ss_pred EEEEEECCCCCccccccccccccccCcccEEEEccC-CceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC
Confidence 99999999865 256677776 79999999999999999999998 9999999998888876 3
Q ss_pred cCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceE--EEEec---------------------cCCccEEEEEEc
Q 017314 298 TGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADI--VRTLK---------------------EHTAPVLSCSWS 354 (373)
Q Consensus 298 ~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~--~~~l~---------------------~h~~~V~~~~~s 354 (373)
+...+ ..++|+|+|++|++|+.||+|+|||+..+.. ...+. .+..+...++|+
T Consensus 239 h~~~v----~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 314 (355)
T 3vu4_A 239 DRADV----VDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWI 314 (355)
T ss_dssp CCSCE----EEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEES
T ss_pred CCCcE----EEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEe
Confidence 44333 4578999999999999999999999976431 11111 112234679999
Q ss_pred CCCCcEEEEeCCCeEEEcC
Q 017314 355 GLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 355 ~~g~~l~s~s~dg~i~iW~ 373 (373)
|+|++|++++.||.+++|+
T Consensus 315 ~d~~~l~~~~~dg~~~~~~ 333 (355)
T 3vu4_A 315 SESSLVVVWPHTRMIETFK 333 (355)
T ss_dssp SSSEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEEE
Confidence 9999999999999999984
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.4e-36 Score=279.20 Aligned_cols=263 Identities=22% Similarity=0.344 Sum_probs=213.0
Q ss_pred EecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 017314 83 KINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSG 162 (373)
Q Consensus 83 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 162 (373)
.+.+|...|++++|+|+|++|++|+.|++|+|||+++++.+..+.+|...+.++++ ++..|++++.|+.+++||....
T Consensus 142 ~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~--~~~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 142 QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSS
T ss_pred EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee--CCCEEEEEeCCCceeEeeeccc
Confidence 34578889999999999999999999999999999999999999999999988776 5679999999999999998864
Q ss_pred -eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCee----eeEEeec-CceeEEEEccCCC-EEEE--Ee
Q 017314 163 -RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYC----VNTIIFH-SNCNALAFSMDGQ-TIFS--GH 233 (373)
Q Consensus 163 -~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~----~~~~~~~-~~~~~~~~~~~g~-~l~s--g~ 233 (373)
..+.++.+|...+..+.+.+ .+.++++++.|+.+++||...+.. +.....+ ..+.+++|+|++. .+++ |+
T Consensus 220 ~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs 298 (420)
T 4gga_A 220 EHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 298 (420)
T ss_dssp SCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT
T ss_pred ceeeEEecccccceeeeeecC-CCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeec
Confidence 46678899999999999987 678999999999999999987642 2333333 4589999999655 4444 45
Q ss_pred CCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEee--CCCeEEEEEccccceeeeeeecCCeeecCeeeeEE
Q 017314 234 IDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSG--RDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCI 311 (373)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (373)
.|++|++||+.+++....+..+ ..+.++.|+|+++.+++++ .|+.|++||+.+++.+..+.+|...+. .++|
T Consensus 299 ~D~~I~iwd~~t~~~~~~~~~~--~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~----~l~~ 372 (420)
T 4gga_A 299 SDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVL----SLTM 372 (420)
T ss_dssp TTCEEEEEETTTTEEEEEEECS--SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEE----EEEE
T ss_pred CCCEEEEEeCCccccceeeccc--cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEE----EEEE
Confidence 7999999999999998888776 5789999999999888764 789999999999999999988776554 4789
Q ss_pred CCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEc
Q 017314 312 SPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWS 354 (373)
Q Consensus 312 s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s 354 (373)
+|||.+|+|||.||+|+|||+....+......+...+....|.
T Consensus 373 spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~~ 415 (420)
T 4gga_A 373 SPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSSLI 415 (420)
T ss_dssp CTTSSCEEEEETTTEEEEECCSCSSCC----------------
T ss_pred cCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCccccccC
Confidence 9999999999999999999998877766666666555444443
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-36 Score=283.11 Aligned_cols=279 Identities=15% Similarity=0.133 Sum_probs=226.4
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc---eeeecc--------------------------------------
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGS---LSSTLY-------------------------------------- 127 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~---~~~~~~-------------------------------------- 127 (373)
.++.+++|+++|++|+++ .++.|++||+.+++ .+..+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 578899999999966655 57899999999888 544443
Q ss_pred ----------------ccccceEEEEEcCCCCEE-EEEeCCCcEEEEEcC--CCeeEEEee--cCCCcEEEEEEeeCCCC
Q 017314 128 ----------------GCLGSVLDLAITHDNRSV-IAASSSNNLYVWDVN--SGRVRHTLT--GHTDKVCAVDVSKISSR 186 (373)
Q Consensus 128 ----------------~~~~~v~~~~~~~~~~~l-~s~s~d~~i~iwd~~--~~~~~~~~~--~h~~~v~~~~~~~~~~~ 186 (373)
+|.+.|.+++|+|++++| ++++.|++|++||+. +++.+..+. .|...|.+++|+| ++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~ 162 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAE-DDT 162 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECT-TSS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcC-CCC
Confidence 233479999999999996 888899999999999 888888776 5678999999998 678
Q ss_pred EEEEEeCCCcEEEEEccCCeeee----EEeec-CceeEEEEccC---CCEEEEEeCCCcEEEEECCCCeeeEEEe-cccc
Q 017314 187 HVVSAAYDRTLKVWDLHKGYCVN----TIIFH-SNCNALAFSMD---GQTIFSGHIDGNLRLWDIQTGKLLSEVA-AHSL 257 (373)
Q Consensus 187 ~~~s~s~D~~i~vwd~~~~~~~~----~~~~~-~~~~~~~~~~~---g~~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~ 257 (373)
++++|+.|+.|++|++..+.... .+..| ..+.+++|+|+ +++|++|+.|++|++||+++++.+..+. .|.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~- 241 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK- 241 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS-
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC-
Confidence 99999999999999998776443 44444 45899999999 9999999999999999999998887744 554
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCC---------------------eeecCeeeeEECCCCc
Q 017314 258 AAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGN---------------------RVASNWSRSCISPDES 316 (373)
Q Consensus 258 ~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~s~~~~ 316 (373)
..|.+++|+ ++++|++++.|+.+++||+++++....+..+.. .....+..++++|++.
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~ 320 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP 320 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC
Confidence 789999999 999999999999999999999887766653210 1112345577899999
Q ss_pred EEEEEe-CCCcEEEEEc--cCc---eEEEEeccCCccEEEEEEcCCCCcEEEEeC------CCeEEEc
Q 017314 317 YVAAGS-ADGSVYIWSI--SKA---DIVRTLKEHTAPVLSCSWSGLGKPLASADK------NGVVCVW 372 (373)
Q Consensus 317 ~l~sgs-~Dg~i~iwd~--~~~---~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~------dg~i~iW 372 (373)
+|++++ .|+.|+||++ ..+ ..+..+..| +.|.+++|+|++.+++.++. +..|.+|
T Consensus 321 ~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~ 387 (450)
T 2vdu_B 321 FVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFI 387 (450)
T ss_dssp EEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEE
T ss_pred EEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEE
Confidence 999998 8999999999 555 677888888 88999999996544444343 4457776
No 94
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-37 Score=289.22 Aligned_cols=257 Identities=12% Similarity=0.047 Sum_probs=206.9
Q ss_pred cCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q 017314 88 EGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHT 167 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 167 (373)
..+|.+++|+|||+++||||.|++|+ |...+ ..+.+|...|.+++|+|+| .++++.+|+.+... ...
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~---~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~-~~~ 81 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYA---KDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNG-LLN 81 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCC---SCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSC-SST
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--ccccc---ceecCCCccEEEEEECCCC-------CcceEEEEeCCCce-Eee
Confidence 47899999999999999999999999 75555 4457999999999999998 45565555543222 222
Q ss_pred eecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC------ceeEEEEccCCCEEEEEeCCCcEEEE
Q 017314 168 LTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS------NCNALAFSMDGQTIFSGHIDGNLRLW 241 (373)
Q Consensus 168 ~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~sg~~dg~i~iw 241 (373)
+ .|.+.|.+++|+| ++..+++++.||+|++||... ++..+. |. .+.+++|||||++|++|+.||+|++|
T Consensus 82 ~-~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIW 156 (588)
T 2j04_A 82 S-QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFF 156 (588)
T ss_dssp T-SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred c-CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 2 5688999999999 678899999999999999644 555555 44 38999999999999999999999999
Q ss_pred ECCCCee-------eEEE----ecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce---eeeee-ecCCeeecCe
Q 017314 242 DIQTGKL-------LSEV----AAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV---CGSLR-ATGNRVASNW 306 (373)
Q Consensus 242 d~~~~~~-------~~~~----~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~---~~~~~-~~~~~~~~~~ 306 (373)
|+.++.. +..+ .+| ...|.+++|+|+| +++++.|+.+++||+..... ..++. .+...+
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh-~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V---- 229 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGS-KDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKI---- 229 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTC-CCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCC----
T ss_pred ECCCCccccccceeeeeeecccccc-cccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcE----
Confidence 9998753 4565 333 3789999999999 88899999999999987653 23342 332222
Q ss_pred eeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEE--cCCCCcEEEEeCCCeEEEcC
Q 017314 307 SRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSW--SGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 307 ~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~--s~~g~~l~s~s~dg~i~iW~ 373 (373)
..++|+ |++||+++ ||+|++||+.++.......+|.+.|.+++| +|+++.|++++.||+ ++|.
T Consensus 230 ~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 230 TDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp CCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred EEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 346677 68999998 699999999988874444489999999999 999999999999999 9983
No 95
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3.6e-36 Score=273.60 Aligned_cols=242 Identities=16% Similarity=0.195 Sum_probs=209.3
Q ss_pred ccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCe--eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEcc
Q 017314 126 LYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR--VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLH 203 (373)
Q Consensus 126 ~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~ 203 (373)
+..|.++|.+++|+|++++|++++.|+.|++||+.+++ ....+.+|...|.+++|+| +++++++++.|++|++||+.
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECC
Confidence 34578899999999999999999999999999999987 8889999999999999998 67899999999999999999
Q ss_pred CCeeeeEEe---ecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCee---eEEEecccccceEEEEEcCCCCEEEEeeC
Q 017314 204 KGYCVNTII---FHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKL---LSEVAAHSLAAVTSISLSRSGNIILTSGR 277 (373)
Q Consensus 204 ~~~~~~~~~---~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 277 (373)
++....... +...+.+++|+|++++|++|+.||.|++||++.+.. ...+...+...|.+++|+|++++|++++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 83 GRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 887554443 334689999999999999999999999999988763 33343333478999999999999999999
Q ss_pred CCeEEEEEcc------------------ccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEE
Q 017314 278 DNLHNLFDIR------------------SLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVR 339 (373)
Q Consensus 278 d~~i~~~d~~------------------~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~ 339 (373)
|+.+++||++ ..+....+..+... ...++++|++.+|++|+.||.|++||+.+++++.
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 238 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGW----VHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA 238 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSC----EEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCe----EEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE
Confidence 9999999964 44555555444433 3457899999999999999999999999999999
Q ss_pred EeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 340 TLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 340 ~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
.+..|..+|.+++|+|++++|+++ .||.|++|+
T Consensus 239 ~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~ 271 (372)
T 1k8k_C 239 TLASETLPLLAVTFITESSLVAAG-HDCFPVLFT 271 (372)
T ss_dssp EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEE
T ss_pred EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEE
Confidence 999999999999999999988887 999999995
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.6e-35 Score=275.29 Aligned_cols=282 Identities=16% Similarity=0.166 Sum_probs=237.8
Q ss_pred EEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceee-----eccccccceEEEEEcCCCCEEEEEeCCCcEEE
Q 017314 82 HKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSS-----TLYGCLGSVLDLAITHDNRSVIAASSSNNLYV 156 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~i 156 (373)
..+..+ ..+.+++|+|++..+++++.|++|++||+.+++... .+.+|.+.|.+++|++++..+++++.|+.|++
T Consensus 117 ~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~ 195 (433)
T 3bws_A 117 SRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHV 195 (433)
T ss_dssp EEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEE
T ss_pred EEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEE
Confidence 334444 345689999988888888899999999999988776 45678889999999999999999999999999
Q ss_pred EEcCCCeeEEEeecCCCcEEEEEEeeCCCCEE-EEEeCCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEe--
Q 017314 157 WDVNSGRVRHTLTGHTDKVCAVDVSKISSRHV-VSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGH-- 233 (373)
Q Consensus 157 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-~s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~-- 233 (373)
||+.+++....+..|...+.+++|++. +..+ ++++.|++|++||++++..+..+..+..+.+++|+|+|+++++++
T Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~ 274 (433)
T 3bws_A 196 FDLKTLAYKATVDLTGKWSKILLYDPI-RDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFS 274 (433)
T ss_dssp EETTTCCEEEEEECSSSSEEEEEEETT-TTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEE
T ss_pred EECCCceEEEEEcCCCCCeeEEEEcCC-CCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECC
Confidence 999999999999999999999999985 4555 666689999999999998888777777789999999999999888
Q ss_pred ------CCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCE-EEEeeCCCeEEEEEccccceeeeeeecCCeeecCe
Q 017314 234 ------IDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNI-ILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNW 306 (373)
Q Consensus 234 ------~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 306 (373)
.||.|++||+.+++.+..+.. . ..+.+++|+|+++. +++++.|+.+++||+.+.+....+.... ..
T Consensus 275 ~~~~~~~dg~i~~~d~~~~~~~~~~~~-~-~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-----~~ 347 (433)
T 3bws_A 275 ASNQESGGGRLGIYSMDKEKLIDTIGP-P-GNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIPVFD-----KP 347 (433)
T ss_dssp SCTTCSCCEEEEEEETTTTEEEEEEEE-E-ECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEECSS-----SE
T ss_pred CCccccCCCeEEEEECCCCcEEeeccC-C-CCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEecCCC-----CC
Confidence 488999999999987766532 2 47889999999975 4667899999999999887766654322 22
Q ss_pred eeeEECCCCcEEEEEeC---------------CCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeC-CCeEE
Q 017314 307 SRSCISPDESYVAAGSA---------------DGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADK-NGVVC 370 (373)
Q Consensus 307 ~~~~~s~~~~~l~sgs~---------------Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~-dg~i~ 370 (373)
..++++|+|++|++++. ||.|++||+.+++.+..+..+ ..+.+++|+|+|++|++++. |+.|+
T Consensus 348 ~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~ 426 (433)
T 3bws_A 348 NTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDFLDHQIR 426 (433)
T ss_dssp EEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEETTTTEEE
T ss_pred CeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEECCCCeEE
Confidence 35789999999888876 579999999999998888764 57899999999999988875 99999
Q ss_pred EcC
Q 017314 371 VWT 373 (373)
Q Consensus 371 iW~ 373 (373)
+|+
T Consensus 427 v~~ 429 (433)
T 3bws_A 427 VYR 429 (433)
T ss_dssp EEE
T ss_pred EEE
Confidence 995
No 97
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-37 Score=305.75 Aligned_cols=252 Identities=18% Similarity=0.254 Sum_probs=207.7
Q ss_pred EEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCC--CCceeeeccccccceEEEEEcCC--CCEEEEEeCCCcEEEE
Q 017314 82 HKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTN--TGSLSSTLYGCLGSVLDLAITHD--NRSVIAASSSNNLYVW 157 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~d~~i~iw 157 (373)
..+.+|.++|++++|+|++++|++|+.||+|++||+. ++.....+.+|.++|.+++|+|+ +++|++|+.|++|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4578999999999999999999999999999999997 55677888999999999999988 8999999999999999
Q ss_pred EcCCCe--eEEEeecCCCcEEEEEEeeCC-CCEEEEEeCCCcEEEEEccCCeee--eEEee-cCceeEEEEcc-------
Q 017314 158 DVNSGR--VRHTLTGHTDKVCAVDVSKIS-SRHVVSAAYDRTLKVWDLHKGYCV--NTIIF-HSNCNALAFSM------- 224 (373)
Q Consensus 158 d~~~~~--~~~~~~~h~~~v~~~~~~~~~-~~~~~s~s~D~~i~vwd~~~~~~~--~~~~~-~~~~~~~~~~~------- 224 (373)
|+.+++ ....+.+|...|.+++|+|.. +..+++|+.||+|++||++.+... ..+.. ...+.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~ 162 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDG 162 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccc
Confidence 999987 778889999999999999842 789999999999999999877332 22323 34689999999
Q ss_pred ------CCCEEEEEeCCCcEEEEECCCC----eeeEEEecccccceEEEEEcCC---CCEEEEeeCCCeEEEEEccccce
Q 017314 225 ------DGQTIFSGHIDGNLRLWDIQTG----KLLSEVAAHSLAAVTSISLSRS---GNIILTSGRDNLHNLFDIRSLEV 291 (373)
Q Consensus 225 ------~g~~l~sg~~dg~i~iwd~~~~----~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~~d~~~~~~ 291 (373)
++.++++|+.||.|++||++++ .....+..|. ..|++++|+|+ +++|++++.|+.+++||+++...
T Consensus 163 ~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~-~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~ 241 (753)
T 3jro_A 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHS-DWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG 241 (753)
T ss_dssp ----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCS-SCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS
T ss_pred ccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCC-CcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC
Confidence 5899999999999999999877 4555666665 78999999999 89999999999999999987532
Q ss_pred eeee-eecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccC
Q 017314 292 CGSL-RATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISK 334 (373)
Q Consensus 292 ~~~~-~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~ 334 (373)
.... .............++++|+|.+|++|+.||.|++|++..
T Consensus 242 ~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp CCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred cceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 1110 011111222334578999999999999999999999874
No 98
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4e-38 Score=287.56 Aligned_cols=240 Identities=14% Similarity=0.166 Sum_probs=195.4
Q ss_pred cccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCC--eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC
Q 017314 127 YGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSG--RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK 204 (373)
Q Consensus 127 ~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~ 204 (373)
..+.++|.+++|+|++++|++++.|++|++||+.++ +....+.+|...|.+++|+| +++++++|+.|++|++||+.+
T Consensus 8 ~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~ 86 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRP 86 (377)
T ss_dssp EECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC----
T ss_pred ecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCC
Confidence 345678999999999999999999999999999988 78889999999999999998 578899999999999999988
Q ss_pred Ce---eeeEEee-cCceeEEEEccCCCEEEEEeCCCcEEEEECCCCe---eeEEEecccccceEEEEEcCCCCEEEEeeC
Q 017314 205 GY---CVNTIIF-HSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGK---LLSEVAAHSLAAVTSISLSRSGNIILTSGR 277 (373)
Q Consensus 205 ~~---~~~~~~~-~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 277 (373)
+. +...+.. ...+.+++|+|++++|++|+.|+.|++||+++++ ....+...+...|.+++|+|++++|++++.
T Consensus 87 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 87 DGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp --CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 76 3333333 3468999999999999999999999999999887 366676623479999999999999999999
Q ss_pred CCeEEEEEccc------------------cceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceE--
Q 017314 278 DNLHNLFDIRS------------------LEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADI-- 337 (373)
Q Consensus 278 d~~i~~~d~~~------------------~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~-- 337 (373)
|+.+++||++. .+....+ .+. .....++++|++++|++|+.||.|++||+.+++.
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSG----GWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCS----SSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCC----ceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 99999999853 2233333 232 2344578999999999999999999999999877
Q ss_pred --EEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEc
Q 017314 338 --VRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 338 --~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW 372 (373)
+..+.+|..+|.+++|+|+|++|++++.|+.+.+|
T Consensus 242 ~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~ 278 (377)
T 3dwl_C 242 RALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQ 278 (377)
T ss_dssp EECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEEC
T ss_pred eeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEE
Confidence 78889999999999999999999999888777544
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=274.57 Aligned_cols=247 Identities=15% Similarity=0.203 Sum_probs=208.2
Q ss_pred cCccCcEEEEEEcCC---CCEEEEeeCCCcEEEEeCCCCc-eeeeccccccceEEEE------EcCCCCEEEEEeCCCcE
Q 017314 85 NAHEGGCASILFEYN---SARLISGGQDKSIKLWDTNTGS-LSSTLYGCLGSVLDLA------ITHDNRSVIAASSSNNL 154 (373)
Q Consensus 85 ~~h~~~v~~~~~~~~---~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~v~~~~------~~~~~~~l~s~s~d~~i 154 (373)
.+|..+|.+++|+|+ +.+|++|+.|+.|++||+.+++ ....+.+|...|.++. |+|++++|++++.|++|
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 379999999999999 6999999999999999999987 7888899999999995 57899999999999999
Q ss_pred EEEEcCCCe-eEEEeecCCC----cEEEEEE----eeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCceeEEEEcc-
Q 017314 155 YVWDVNSGR-VRHTLTGHTD----KVCAVDV----SKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSM- 224 (373)
Q Consensus 155 ~iwd~~~~~-~~~~~~~h~~----~v~~~~~----~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~- 224 (373)
++||+.+++ +...+..|.. .+.++.+ ++ ++.++++++.|+.|++||++++...........+.+++|+|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~ 220 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQ-EERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRK 220 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC--CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCS
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCC-CCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCC
Confidence 999999886 6777776655 7888884 44 67899999999999999999998876666667799999999
Q ss_pred --CCCEEEEEeCCCcEEEEECCCCeeeEEEe-----cccccceEEEEEcCCCC-EEEEeeCCCeEEEEEccccc------
Q 017314 225 --DGQTIFSGHIDGNLRLWDIQTGKLLSEVA-----AHSLAAVTSISLSRSGN-IILTSGRDNLHNLFDIRSLE------ 290 (373)
Q Consensus 225 --~g~~l~sg~~dg~i~iwd~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~------ 290 (373)
++.++++|+.||.|++||+++++....+. .|. ..|++++|+|+++ +|++++.|+.+++||++...
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 299 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHK-STVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKD 299 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCS-SCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CC
T ss_pred CCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCc-CCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCccccccc
Confidence 99999999999999999998877665554 554 7899999999998 89999999999999998543
Q ss_pred -------------eeeeeeecCCeeecCeeeeEECCCCcEEE-EEeCCCcEEEEEccCceE
Q 017314 291 -------------VCGSLRATGNRVASNWSRSCISPDESYVA-AGSADGSVYIWSISKADI 337 (373)
Q Consensus 291 -------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-sgs~Dg~i~iwd~~~~~~ 337 (373)
....+..+... +..++++|++.+|+ +|+.||.|+|||+.+.+.
T Consensus 300 ~~g~~~~~~~~~~~~~~~~~~~~~----v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 300 SEGIEMGVAGSVSLLQNVTLSTQP----ISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp TTSCCCCCCCEEEEEEEEECCSSC----EEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred CCCCccccccccceeeccccCCCC----eeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 23334444333 34578999999998 899999999999987653
No 100
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.6e-37 Score=277.56 Aligned_cols=242 Identities=16% Similarity=0.281 Sum_probs=207.5
Q ss_pred CccCcEEEEEEcCC----CCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcC-CCCEEEEEeCCCcEEEEEcC
Q 017314 86 AHEGGCASILFEYN----SARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITH-DNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 86 ~h~~~v~~~~~~~~----~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~ 160 (373)
.|...|++++|+++ +.+|++|+.|++|++||+.+++.+..+.+|...|.+++|+| ++.+|++++.|++|++||+.
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 47788999999999 66999999999999999999999999999999999999999 89999999999999999999
Q ss_pred CCeeEEEe---ecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe-------------------------
Q 017314 161 SGRVRHTL---TGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII------------------------- 212 (373)
Q Consensus 161 ~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~------------------------- 212 (373)
+++....+ .+|...|.+++|+| ++.++++++.|+.|++||++++.....+.
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFS 225 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEE
T ss_pred cCeEEEEecccccccCceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccc
Confidence 99998888 78999999999998 67899999999999999998765432222
Q ss_pred ----ecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCee--------------eEEEecccccceEEEEEcCC--CCEE
Q 017314 213 ----FHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKL--------------LSEVAAHSLAAVTSISLSRS--GNII 272 (373)
Q Consensus 213 ----~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~--------------~~~~~~~~~~~v~~~~~~~~--~~~l 272 (373)
+...+.+++|+ +.++++++.||.|++||++++.. +..+..|. ..|++++|+|+ +++|
T Consensus 226 ~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~s~~~~~~~l 302 (366)
T 3k26_A 226 TRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQ-CDIWYMRFSMDFWQKML 302 (366)
T ss_dssp ECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSS-CCSSCCCCEECTTSSEE
T ss_pred cccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccC-CcEEEEEEcCCCCCcEE
Confidence 33458899998 77999999999999999987643 56666665 67999999999 9999
Q ss_pred EEeeCCCeEEEEEccccceee----eeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEcc
Q 017314 273 LTSGRDNLHNLFDIRSLEVCG----SLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSIS 333 (373)
Q Consensus 273 ~s~~~d~~i~~~d~~~~~~~~----~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~ 333 (373)
++++.|+.+++||+...+... .+..+. ....+..++++|++++|++|+.||.|++||+.
T Consensus 303 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 303 ALGNQVGKLYVWDLEVEDPHKAKCTTLTHHK--CGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECTTSCEEEEECCSSSGGGCEEEEECCTT--CCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEEecCCcEEEEECCCCCCccccceEEcccc--cCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 999999999999998865433 344331 12334557899999999999999999999985
No 101
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=5.3e-37 Score=285.98 Aligned_cols=254 Identities=17% Similarity=0.212 Sum_probs=195.8
Q ss_pred ceEEecCccCcEEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCceeeecc--ccccceEEEEEcCCCCEEEEEeCCCcEEE
Q 017314 80 CKHKINAHEGGCASILFEY-NSARLISGGQDKSIKLWDTNTGSLSSTLY--GCLGSVLDLAITHDNRSVIAASSSNNLYV 156 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~s~d~~i~i 156 (373)
+...+.+|.+.|++++|+| ++.+|+|||.|++|++||++++....... .+...+.+++|+|++.+|++|+.|++|++
T Consensus 156 ~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~ 235 (435)
T 4e54_B 156 TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVIL 235 (435)
T ss_dssp EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEE
T ss_pred eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEee
Confidence 3455678999999999997 68899999999999999998765433332 23446788999999999999999999999
Q ss_pred EEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE----eecCceeEEEEccCCCEEEEE
Q 017314 157 WDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI----IFHSNCNALAFSMDGQTIFSG 232 (373)
Q Consensus 157 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~----~~~~~~~~~~~~~~g~~l~sg 232 (373)
||++. +.+..+.+|...|.+++|+|....++++|+.|++|++||+++......+ .+...+++++|+|+|.+|++|
T Consensus 236 wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~ 314 (435)
T 4e54_B 236 LNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTT 314 (435)
T ss_dssp EESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEE
T ss_pred eccCc-ceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEE
Confidence 99864 5677889999999999999877778999999999999999876544332 223458999999999999999
Q ss_pred eCCCcEEEEECCCCeeeEEEeccccc-----ceEEEEEcCCCCEEEEee------------CCCeEEEEEccccceeeee
Q 017314 233 HIDGNLRLWDIQTGKLLSEVAAHSLA-----AVTSISLSRSGNIILTSG------------RDNLHNLFDIRSLEVCGSL 295 (373)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~------------~d~~i~~~d~~~~~~~~~~ 295 (373)
+.||.|++||+.++.....+..|... .+....|+|++.++++++ .++.|++||..+++....+
T Consensus 315 ~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l 394 (435)
T 4e54_B 315 DQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQL 394 (435)
T ss_dssp ESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEE
T ss_pred cCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEE
Confidence 99999999999998877766554311 123345666665555543 3457999999998877665
Q ss_pred ee-cCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEE
Q 017314 296 RA-TGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIV 338 (373)
Q Consensus 296 ~~-~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~ 338 (373)
.. +...+. ...+|+|+|.+|++|+ |+.|+||++.+++..
T Consensus 395 ~~~~~~~v~---s~~~fspdg~~lasg~-d~~i~iW~~~~gk~r 434 (435)
T 4e54_B 395 YDPESSGIS---SLNEFNPMGDTLASAM-GYHILIWSQQEARTR 434 (435)
T ss_dssp CCSSCCCCC---CEEEECTTSSCEEEEC-SSEEEECCCC-----
T ss_pred eCCCCCcEE---EEEEECCCCCEEEEEc-CCcEEEEECCcCeee
Confidence 43 222222 2236899999999987 789999999987653
No 102
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-35 Score=261.95 Aligned_cols=266 Identities=23% Similarity=0.308 Sum_probs=225.4
Q ss_pred HhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC---ceeeeccc
Q 017314 52 LAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTG---SLSSTLYG 128 (373)
Q Consensus 52 ~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~---~~~~~~~~ 128 (373)
++....|+.++.|+... ......+..|.+.|.+++|+|++..|++|+.|+.|++|++... +....+.+
T Consensus 32 l~s~~~dg~v~vw~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~ 102 (313)
T 3odt_A 32 VASVSRDGTVRLWSKDD---------QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIG 102 (313)
T ss_dssp EEEEETTSEEEEEEESS---------SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECC
T ss_pred EEEEEcCCcEEEEECCC---------CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhh
Confidence 55666777777776432 2345667789999999999999999999999999999998654 55677888
Q ss_pred cccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeee
Q 017314 129 CLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCV 208 (373)
Q Consensus 129 ~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~ 208 (373)
|...|.+++| +++.+++++.|+.|++|| .++....+..|...+.++.+.+.+++.+++++.|+.|++||. +...
T Consensus 103 ~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~ 176 (313)
T 3odt_A 103 HQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVI 176 (313)
T ss_dssp CSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEE
T ss_pred cccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceE
Confidence 9999999999 678999999999999999 778888999999999999999878889999999999999994 4445
Q ss_pred eEEe--ecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEc
Q 017314 209 NTII--FHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDI 286 (373)
Q Consensus 209 ~~~~--~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~ 286 (373)
..+. ....+.+++|+|++. +++|+.||.|++||+++++.+..+..|. ..|++++|+|++ .|++++.|+.+++||+
T Consensus 177 ~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~i~~~~~~~~~-~l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 177 KTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHE-SFVYCIKLLPNG-DIVSCGEDRTVRIWSK 253 (313)
T ss_dssp EEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEECTTS-CEEEEETTSEEEEECT
T ss_pred EEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCC-ceEEEEEEecCC-CEEEEecCCEEEEEEC
Confidence 5554 335589999999998 8999999999999999999999998876 789999999999 5889999999999999
Q ss_pred cccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEE
Q 017314 287 RSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRT 340 (373)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~ 340 (373)
++.+....+..+...+ ..++++|+++ +++|+.||.|++|++.+++....
T Consensus 254 ~~~~~~~~~~~~~~~i----~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 254 ENGSLKQVITLPAISI----WSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp TTCCEEEEEECSSSCE----EEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred CCCceeEEEeccCceE----EEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 9998888877665443 3478999998 55799999999999998766543
No 103
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-35 Score=267.38 Aligned_cols=239 Identities=20% Similarity=0.352 Sum_probs=212.3
Q ss_pred eeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEc
Q 017314 123 SSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDL 202 (373)
Q Consensus 123 ~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~ 202 (373)
...+.+|.+.|++++|+|++++|++++.|+.|++||+.+++.+..+.+|...|.+++|+| +++++++++.|++|++||+
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEET
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEEC
Confidence 455789999999999999999999999999999999999999999999999999999998 6789999999999999999
Q ss_pred cCCeeeeEEeecCceeEEEEccCCCEEEEEeCC-----CcEEEEECCCCee-----------eEEEeccc-ccceEEEEE
Q 017314 203 HKGYCVNTIIFHSNCNALAFSMDGQTIFSGHID-----GNLRLWDIQTGKL-----------LSEVAAHS-LAAVTSISL 265 (373)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~d-----g~i~iwd~~~~~~-----------~~~~~~~~-~~~v~~~~~ 265 (373)
.++.++..+.....+.+++|+|++.++++++.+ |.|++||+..+.. +..+..+. ...+.+++|
T Consensus 104 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 104 SNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 999998888877789999999999999999999 9999999976532 22333332 128999999
Q ss_pred cCCCCEEEEeeCCCeEEEEEccc-cceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccC
Q 017314 266 SRSGNIILTSGRDNLHNLFDIRS-LEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEH 344 (373)
Q Consensus 266 ~~~~~~l~s~~~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h 344 (373)
+|++++|++++.|+.+++||+++ .+....+..+...+ ..++++|++.+|++++.||.|++||+.+++.+..+. +
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~ 258 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSI----SDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-T 258 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCE----EEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-C
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCce----eEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-C
Confidence 99999999999999999999998 66666666655444 347899999999999999999999999999988887 7
Q ss_pred CccEEEEEEcCCCCcEEEEeCCC
Q 017314 345 TAPVLSCSWSGLGKPLASADKNG 367 (373)
Q Consensus 345 ~~~V~~~~~s~~g~~l~s~s~dg 367 (373)
..++.+++|+|+++++++++.++
T Consensus 259 ~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 259 DCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp SSCEEEEEECSSSSEEEEEECCC
T ss_pred CCCceeEEecCCCceEEEeecCC
Confidence 78999999999999999999998
No 104
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.1e-35 Score=276.51 Aligned_cols=259 Identities=20% Similarity=0.343 Sum_probs=211.3
Q ss_pred EEecCccCcEEEEEEcCC-CCEEEEeeCCCcEEEEeCCC----------CceeeeccccccceEEEEEcCCCC-EEEEEe
Q 017314 82 HKINAHEGGCASILFEYN-SARLISGGQDKSIKLWDTNT----------GSLSSTLYGCLGSVLDLAITHDNR-SVIAAS 149 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~v~iwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~s 149 (373)
....+|.+.|++++|+|+ +.+|++|+.||.|++||+.+ ......+.+|...|.+++|+|++. +|++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 456689999999999997 67999999999999999986 566777889999999999999998 999999
Q ss_pred CCCcEEEEEcCCCe-------eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCC---eeeeEEeec-Ccee
Q 017314 150 SSNNLYVWDVNSGR-------VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKG---YCVNTIIFH-SNCN 218 (373)
Q Consensus 150 ~d~~i~iwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~---~~~~~~~~~-~~~~ 218 (373)
.|++|++||+.++. ....+.+|...|.+++|+|.....+++++.|+.|++||++++ .+...+..| ..++
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 99999999998732 145678999999999999877889999999999999999976 455555444 5689
Q ss_pred EEEEccCCC-EEEEEeCCCcEEEEECCC-CeeeEEEecccccceEEEEEcCCCC-EEEEeeCCCeEEEEEccccceeeee
Q 017314 219 ALAFSMDGQ-TIFSGHIDGNLRLWDIQT-GKLLSEVAAHSLAAVTSISLSRSGN-IILTSGRDNLHNLFDIRSLEVCGSL 295 (373)
Q Consensus 219 ~~~~~~~g~-~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~ 295 (373)
+++|+|++. ++++|+.||.|++||+++ ...+..+..|. ..|++++|+|+++ +|++++.|+.+++||+.........
T Consensus 282 ~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~-~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~ 360 (430)
T 2xyi_A 282 CLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK-DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQST 360 (430)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS-SCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCH
T ss_pred EEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC-CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCc
Confidence 999999987 688999999999999998 45667777665 6888888888874 6777888888888887653211000
Q ss_pred eecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCC-cEEEEeCCCeEEEcC
Q 017314 296 RATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGK-PLASADKNGVVCVWT 373 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~-~l~s~s~dg~i~iW~ 373 (373)
. ...++ ...++..+.+|...|.+++|+|+++ +|++++.||.|+||+
T Consensus 361 ------------------~------~~~~~--------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 361 ------------------E------DAEDG--------PPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp ------------------H------HHHHC--------CTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred ------------------c------ccccC--------CcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 0 00000 1245666788999999999999999 899999999999995
No 105
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1.8e-34 Score=264.73 Aligned_cols=262 Identities=16% Similarity=0.182 Sum_probs=224.1
Q ss_pred CEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEE-EEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEE
Q 017314 101 ARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSV-IAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVD 179 (373)
Q Consensus 101 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~ 179 (373)
..+++++.|++|++||+.+++....+.+|. .+.+++|+|+++++ ++++.|++|++||+.+++.+..+..|. .+.+++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 467899999999999999999888887765 48999999999987 567799999999999999998888665 899999
Q ss_pred EeeCCCCEE-EEEeCCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEE-EEEeCCCcEEEEECCCCeeeEEEecccc
Q 017314 180 VSKISSRHV-VSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTI-FSGHIDGNLRLWDIQTGKLLSEVAAHSL 257 (373)
Q Consensus 180 ~~~~~~~~~-~s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 257 (373)
|+|. ++++ ++++.|++|++||+.+++.+..+..+..+.+++|+|+|+.+ ++++.|+.|++||+.+++.+..+..+
T Consensus 81 ~spd-g~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-- 157 (391)
T 1l0q_A 81 VSPD-GKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-- 157 (391)
T ss_dssp ECTT-SSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC--
T ss_pred ECCC-CCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC--
Confidence 9984 5555 56667899999999999988888888889999999999987 68888999999999999988887765
Q ss_pred cceEEEEEcCCCCEE-EEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEe---CCCcEEEEEcc
Q 017314 258 AAVTSISLSRSGNII-LTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGS---ADGSVYIWSIS 333 (373)
Q Consensus 258 ~~v~~~~~~~~~~~l-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs---~Dg~i~iwd~~ 333 (373)
..+.+++|+|+++++ ++++.++.+++||+++.+....+.... . ...++++|+|++|++++ .++.|++||+.
T Consensus 158 ~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~----~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 158 RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEA-A----PSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-E----EEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCC-C----ccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 467999999999987 677889999999999887766654322 1 23467999999999887 68999999999
Q ss_pred CceEEEEeccCCccEEEEEEcCCCCcE-EEEeCCCeEEEcC
Q 017314 334 KADIVRTLKEHTAPVLSCSWSGLGKPL-ASADKNGVVCVWT 373 (373)
Q Consensus 334 ~~~~~~~l~~h~~~V~~~~~s~~g~~l-~s~s~dg~i~iW~ 373 (373)
+++.+..+..|. .+.+++|+|+|++| ++++.|+.|++|+
T Consensus 233 ~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d 272 (391)
T 1l0q_A 233 TNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVID 272 (391)
T ss_dssp TTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred CCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEE
Confidence 999998888766 47899999999977 6778899999995
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3e-35 Score=274.06 Aligned_cols=259 Identities=27% Similarity=0.471 Sum_probs=206.4
Q ss_pred ccceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEE
Q 017314 78 STCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVW 157 (373)
Q Consensus 78 ~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iw 157 (373)
..+...+.+|.+.|.++.| +++.|++|+.||+|++||+.+++....+.+|...|.+++|+ +..+++++.|++|++|
T Consensus 163 ~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l~s~s~dg~i~vw 238 (435)
T 1p22_A 163 LECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMMVTCSKDRSIAVW 238 (435)
T ss_dssp CCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEEEEEETTSCEEEE
T ss_pred CeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEEEEeeCCCcEEEE
Confidence 3456788999999999998 78999999999999999999999999999999999999996 4599999999999999
Q ss_pred EcCCCeeE---EEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEEe
Q 017314 158 DVNSGRVR---HTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGH 233 (373)
Q Consensus 158 d~~~~~~~---~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~ 233 (373)
|+.+++.. ..+.+|...|.++++ +++++++|+.|++|++||++++.++..+..|. .+.++++ ++.++++|+
T Consensus 239 d~~~~~~~~~~~~~~~~~~~v~~~~~---~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~ 313 (435)
T 1p22_A 239 DMASPTDITLRRVLVGHRAAVNVVDF---DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGS 313 (435)
T ss_dssp ECSSSSCCEEEEEECCCSSCEEEEEE---ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEE
T ss_pred eCCCCCCceeeeEecCCCCcEEEEEe---CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEe
Confidence 99887654 678899999999988 46799999999999999999999988887664 4777777 578999999
Q ss_pred CCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccc---------eeeeeeecCCeeec
Q 017314 234 IDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLE---------VCGSLRATGNRVAS 304 (373)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~---------~~~~~~~~~~~~~~ 304 (373)
.||.|++||+++++.+..+..|. ..|.+++| ++++|++++.|+.+++||++... ....+..+...+.
T Consensus 314 ~dg~i~iwd~~~~~~~~~~~~h~-~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~- 389 (435)
T 1p22_A 314 SDNTIRLWDIECGACLRVLEGHE-ELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVF- 389 (435)
T ss_dssp TTSCEEEEETTTCCEEEEECCCS-SCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCC-
T ss_pred CCCeEEEEECCCCCEEEEEeCCc-CcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeE-
Confidence 99999999999999999998886 78999998 78899999999999999998765 5556655555443
Q ss_pred CeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcC
Q 017314 305 NWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSG 355 (373)
Q Consensus 305 ~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~ 355 (373)
.+++ ++.+|++|+.||.|++||+.+........ ...+..++.|.+
T Consensus 390 ---~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~ 434 (435)
T 1p22_A 390 ---RLQF--DEFQIVSSSHDDTILIWDFLNDPAAQAEP-PRSPSRTYTYIS 434 (435)
T ss_dssp ---CEEE--CSSCEEECCSSSEEEEEC------------------------
T ss_pred ---EEEe--CCCEEEEEeCCCEEEEEECCCCCCcccCC-CCCCccceeeec
Confidence 2344 88999999999999999998876544332 233555666654
No 107
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=3.1e-35 Score=271.12 Aligned_cols=252 Identities=20% Similarity=0.248 Sum_probs=212.6
Q ss_pred eEEecCccCcEEEEEEcC-CCCEEEEeeCCCcEEEEeCCCC-------ceeeeccccccceEEEEEcCCC-CEEEEEeCC
Q 017314 81 KHKINAHEGGCASILFEY-NSARLISGGQDKSIKLWDTNTG-------SLSSTLYGCLGSVLDLAITHDN-RSVIAASSS 151 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d 151 (373)
...+.+|.+.|++++|+| ++++|++|+.|++|++||+.++ .....+.+|...|.+++|+|++ ++|++++.|
T Consensus 74 ~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 74 VPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred CceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 445789999999999999 9999999999999999999987 5677888999999999999998 699999999
Q ss_pred CcEEEEEcCCCeeEEEe--ecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE-eecCc--eeEEEEccCC
Q 017314 152 NNLYVWDVNSGRVRHTL--TGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI-IFHSN--CNALAFSMDG 226 (373)
Q Consensus 152 ~~i~iwd~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~-~~~~~--~~~~~~~~~g 226 (373)
++|++||+.+++....+ .+|...|.+++|+| ++.++++++.|++|++||++++..+..+ ..+.. +..++|+|++
T Consensus 154 g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 154 NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSR-DGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEG 232 (402)
T ss_dssp SCEEEEETTTTEEEEEECTTTCCSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTT
T ss_pred CEEEEEECCCCCccEEEecCCCCCceEEEEECC-CCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCC
Confidence 99999999999999999 89999999999998 6789999999999999999999988887 45543 6899999999
Q ss_pred CEEEEE---eCCCcEEEEECCCCee-eEEEecccccceEEEEEcCCCCEEEE-eeCCCeEEEEEccccce-eeeeeecCC
Q 017314 227 QTIFSG---HIDGNLRLWDIQTGKL-LSEVAAHSLAAVTSISLSRSGNIILT-SGRDNLHNLFDIRSLEV-CGSLRATGN 300 (373)
Q Consensus 227 ~~l~sg---~~dg~i~iwd~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~i~~~d~~~~~~-~~~~~~~~~ 300 (373)
.+|++| +.|+.|++||+++++. +..........+.+++|+|++++|++ ++.|+.|++||+.+.+. ...+..+.
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~- 311 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS- 311 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC-
T ss_pred cEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc-
Confidence 999999 7999999999998764 33333333367999999999999875 55799999999998763 34443332
Q ss_pred eeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceE
Q 017314 301 RVASNWSRSCISPDESYVAAGSADGSVYIWSISKADI 337 (373)
Q Consensus 301 ~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~ 337 (373)
.......++++|++.++++ .|+.+++|++.++..
T Consensus 312 -~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 312 -SKESQRGMGYMPKRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp -CSSCCSEEEECCGGGSCGG--GTEEEEEEEEETTEE
T ss_pred -cCCcccceEEeccccccee--cceeEEEEEcCCCcE
Confidence 1123345789999998875 567999999988754
No 108
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.5e-34 Score=265.92 Aligned_cols=281 Identities=20% Similarity=0.296 Sum_probs=202.1
Q ss_pred cCccCcEEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCC---CEEEEEeCCCcEEEEEcC
Q 017314 85 NAHEGGCASILFEY-NSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDN---RSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 85 ~~h~~~v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~s~s~d~~i~iwd~~ 160 (373)
.+|.+.|.+++|+| ++.+|++++.|+.|++||+.+++....+. +...+.++.+++.+ .++++++.|+.|++||+.
T Consensus 96 ~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 96 DVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp TCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred ccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 36999999999999 77899999999999999999988777665 67789999998854 499999999999999999
Q ss_pred CCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCe-eeeEE----------------eecCceeEEEEc
Q 017314 161 SGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGY-CVNTI----------------IFHSNCNALAFS 223 (373)
Q Consensus 161 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~-~~~~~----------------~~~~~~~~~~~~ 223 (373)
+++....+.+|...|.+++|+|.....+++|+.|+.|++||++++. +...+ .+...+.+++|+
T Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 254 (408)
T 4a11_B 175 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFT 254 (408)
T ss_dssp SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEEC
T ss_pred CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEc
Confidence 9999999999999999999998655579999999999999998764 22222 123458999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeeeEEEeccc----ccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecC
Q 017314 224 MDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHS----LAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATG 299 (373)
Q Consensus 224 ~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~ 299 (373)
|++++|++++.||.|++||+++++.......+. ...+........+..++.++.|+.+++||+.+.+....+..+.
T Consensus 255 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~ 334 (408)
T 4a11_B 255 SDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHY 334 (408)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCS
T ss_pred CCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCC
Confidence 999999999999999999999887654433221 1122222233445567777889999999999999888887766
Q ss_pred CeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCC-CCcEEEEeCCCeEEEcC
Q 017314 300 NRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGL-GKPLASADKNGVVCVWT 373 (373)
Q Consensus 300 ~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~-g~~l~s~s~dg~i~iW~ 373 (373)
..+. .++++|++.+|++|+.||.|++||+.+++++.....+.. ...++|. ...+.+.+.|+.+++|+
T Consensus 335 ~~v~----~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~W~ 402 (408)
T 4a11_B 335 KTVD----CCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT---KSQLNPAFEDAWSSSDEEGGTSAWS 402 (408)
T ss_dssp SCEE----EEEEETTTTEEEEEETTSCEEEEEECC----------------------------------------
T ss_pred CeEE----EEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe---ccccccccceeecccCccCceeecC
Confidence 5543 478999999999999999999999999888766544332 2334443 34556677899999995
No 109
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=276.62 Aligned_cols=242 Identities=15% Similarity=0.274 Sum_probs=196.7
Q ss_pred cccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCe-----------eEEEeecCC------------CcEEEEEEeeCCC
Q 017314 129 CLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR-----------VRHTLTGHT------------DKVCAVDVSKISS 185 (373)
Q Consensus 129 ~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-----------~~~~~~~h~------------~~v~~~~~~~~~~ 185 (373)
+.+.|.+++|+|++++|++|+.|+.|+|||+.+++ +...+.+|. ..|.+++|+|...
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 57899999999999999999999999999999876 578899998 8899999998532
Q ss_pred -CEEEEEeCCCcEEEEEccCCeee---------------------------------------eEE-e-ecCceeEEEEc
Q 017314 186 -RHVVSAAYDRTLKVWDLHKGYCV---------------------------------------NTI-I-FHSNCNALAFS 223 (373)
Q Consensus 186 -~~~~s~s~D~~i~vwd~~~~~~~---------------------------------------~~~-~-~~~~~~~~~~~ 223 (373)
..+++++.|++|++||+..+... ..+ . +...+.+++|+
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 186 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISIN 186 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEEC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEc
Confidence 68999999999999999764431 111 1 23458999999
Q ss_pred cCCCEEEEEeCCCcEEEEECCC-CeeeEE-------EecccccceEEEEEcCCC-CEEEEeeCCCeEEEEEccccce---
Q 017314 224 MDGQTIFSGHIDGNLRLWDIQT-GKLLSE-------VAAHSLAAVTSISLSRSG-NIILTSGRDNLHNLFDIRSLEV--- 291 (373)
Q Consensus 224 ~~g~~l~sg~~dg~i~iwd~~~-~~~~~~-------~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~~~d~~~~~~--- 291 (373)
|++++|++| .|+.|++||+++ ++.+.. +..|. ..|++++|+|++ ++|++++.|+.+++||+++.+.
T Consensus 187 ~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 187 SDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELT-EVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp TTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCC-CCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred CCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccC-cceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 999999998 799999999984 444432 33444 689999999998 9999999999999999998775
Q ss_pred -eeeeeecCCe--------eecCeeeeEECCCCcEEEEEeCCCcEEEEEccC-ceEEEEeccCCcc--------------
Q 017314 292 -CGSLRATGNR--------VASNWSRSCISPDESYVAAGSADGSVYIWSISK-ADIVRTLKEHTAP-------------- 347 (373)
Q Consensus 292 -~~~~~~~~~~--------~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~-~~~~~~l~~h~~~-------------- 347 (373)
...+..+... ....+..++++|+|++|++|+. |.|++||+.. ++++..+.+|...
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~ 343 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIF 343 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGG
T ss_pred eeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccc
Confidence 4555444321 0013456789999999999999 9999999997 8888888888642
Q ss_pred -EEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 348 -VLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 348 -V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+..++|+|+|++|++|+.||.|++|+
T Consensus 344 ~~~~~~~s~~~~~l~s~s~dg~v~iwd 370 (447)
T 3dw8_B 344 DKFECCWNGSDSVVMTGSYNNFFRMFD 370 (447)
T ss_dssp CCCCEEECTTSSEEEEECSTTEEEEEE
T ss_pred cceEEEECCCCCEEEEeccCCEEEEEE
Confidence 33599999999999999999999995
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-35 Score=293.29 Aligned_cols=245 Identities=21% Similarity=0.340 Sum_probs=204.2
Q ss_pred eeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC--CCeeEEEeecCCCcEEEEEEeeCC-CCEEEEEeCCCcEEEE
Q 017314 124 STLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN--SGRVRHTLTGHTDKVCAVDVSKIS-SRHVVSAAYDRTLKVW 200 (373)
Q Consensus 124 ~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~--~~~~~~~~~~h~~~v~~~~~~~~~-~~~~~s~s~D~~i~vw 200 (373)
..+.+|.++|++++|+|++++|++|+.|++|+|||+. +++....+.+|.++|.+++|++.. ++++++|+.||+|++|
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIW 82 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEE
Confidence 4577999999999999999999999999999999998 557788999999999999998742 7899999999999999
Q ss_pred EccCCe--eeeEEeec-CceeEEEEccC--CCEEEEEeCCCcEEEEECCCCe--eeEEEecccccceEEEEEcC------
Q 017314 201 DLHKGY--CVNTIIFH-SNCNALAFSMD--GQTIFSGHIDGNLRLWDIQTGK--LLSEVAAHSLAAVTSISLSR------ 267 (373)
Q Consensus 201 d~~~~~--~~~~~~~~-~~~~~~~~~~~--g~~l~sg~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~------ 267 (373)
|+.++. ....+..| ..+.+++|+|+ +..+++|+.||.|++||++++. ....+..|. ..|.+++|+|
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~-~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA-IGVNSASWAPATIEED 161 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCS-SCEEEEEECCCC----
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCC-CceEEEEecCcccccc
Confidence 999886 44444434 45899999999 9999999999999999998873 333445554 7899999999
Q ss_pred -------CCCEEEEeeCCCeEEEEEccccc----eeeeeeecCCeeecCeeeeEECCC---CcEEEEEeCCCcEEEEEcc
Q 017314 268 -------SGNIILTSGRDNLHNLFDIRSLE----VCGSLRATGNRVASNWSRSCISPD---ESYVAAGSADGSVYIWSIS 333 (373)
Q Consensus 268 -------~~~~l~s~~~d~~i~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~s~~---~~~l~sgs~Dg~i~iwd~~ 333 (373)
++.++++++.|+.|++||+++.. ....+..|... +..++++|+ +.+|++|+.||.|++||+.
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~----V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW----VRDVAWSPTVLLRSYLASVSQDRTCIIWTQD 237 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC----EEEEEECCCCSSSEEEEEEESSSCEEEEEES
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc----EEEEEeccCCCCCCEEEEEecCCEEEEecCC
Confidence 58999999999999999998763 33444444443 345789999 9999999999999999998
Q ss_pred Cce-----EEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 334 KAD-----IVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 334 ~~~-----~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
++. ......+|...|++++|+|+|++|++++.||.|++|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd 282 (753)
T 3jro_A 238 NEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (753)
T ss_dssp SSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCB
T ss_pred CCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEe
Confidence 864 2333456889999999999999999999999999995
No 111
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=3.7e-35 Score=257.00 Aligned_cols=276 Identities=17% Similarity=0.223 Sum_probs=191.8
Q ss_pred EEEEEEcCCCC---EEEEeeCCCcEEEEeCCCC---ceeeeccccccceEEEEEcCCCCEEEEEeCCC-c-EEEEEcC--
Q 017314 91 CASILFEYNSA---RLISGGQDKSIKLWDTNTG---SLSSTLYGCLGSVLDLAITHDNRSVIAASSSN-N-LYVWDVN-- 160 (373)
Q Consensus 91 v~~~~~~~~~~---~l~s~s~D~~v~iwd~~~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~-~-i~iwd~~-- 160 (373)
+.++-|...+- .++++++ .+|++|+..++ ++++++.+|..+|..+.+.||...|++..-.+ . -.++-+.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 34566655444 6788885 59999999998 78889999998888888888654443332221 1 1111111
Q ss_pred CC----eeEEEeecCCCcEEEEEEeeCCCCEEEEEe--CCCcEEEEEcc-CCeeeeEEeecC-ceeEEEEcc---CCCEE
Q 017314 161 SG----RVRHTLTGHTDKVCAVDVSKISSRHVVSAA--YDRTLKVWDLH-KGYCVNTIIFHS-NCNALAFSM---DGQTI 229 (373)
Q Consensus 161 ~~----~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s--~D~~i~vwd~~-~~~~~~~~~~~~-~~~~~~~~~---~g~~l 229 (373)
.. .....-.+|...|..+ ..++.+.+++ .|++|++|++. .|+.+..+..|. .+..++|+| ++.+|
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l----~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L 196 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGL----TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEAL 196 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEE----TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred CCccccccEEEeCCCeEEEEec----CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceE
Confidence 00 1111113444444443 2444444433 59999999994 477777666665 478889999 78999
Q ss_pred EEEeCCCcEEEEECCCCeeeEEEeccc--ccceEEEEEcCCCCEE------------EEeeCCCeEEEEEccccceeeee
Q 017314 230 FSGHIDGNLRLWDIQTGKLLSEVAAHS--LAAVTSISLSRSGNII------------LTSGRDNLHNLFDIRSLEVCGSL 295 (373)
Q Consensus 230 ~sg~~dg~i~iwd~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l------------~s~~~d~~i~~~d~~~~~~~~~~ 295 (373)
++|+.|++|+|||+.++++++++..|+ ...+.+++|+|+|.++ ++++.|+++++||..+.+.+..+
T Consensus 197 aSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~ 276 (356)
T 2w18_A 197 LGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVM 276 (356)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEE
T ss_pred EEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEE
Confidence 999999999999999999999998654 2467888999999876 56788999999999988766544
Q ss_pred eecC-CeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEE-EEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 296 RATG-NRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVL-SCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 296 ~~~~-~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~-~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
.... ......+ ...+.++.++|+|+.||+|+|||+.+++++++|++|...+. .++|||||++|+||+.|++|+||+
T Consensus 277 ~~~~p~Gh~~~~--lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd 354 (356)
T 2w18_A 277 LYCLPPGQAGRF--LEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYH 354 (356)
T ss_dssp EECCCTTCCCCE--EEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEE
T ss_pred EeeccCCCccee--EccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEec
Confidence 2110 0000001 12233477899999999999999999999999999988765 589999999999999999999996
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=4.9e-33 Score=255.09 Aligned_cols=300 Identities=15% Similarity=0.198 Sum_probs=238.6
Q ss_pred cccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCCCCEE-EEeeCCCcEEEEeCCCCceeeeccccccc
Q 017314 54 KQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYNSARL-ISGGQDKSIKLWDTNTGSLSSTLYGCLGS 132 (373)
Q Consensus 54 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~~~ 132 (373)
....|+.++.|+... ..+...+..|. .+.+++|+|++++| ++++.|++|++||+.+++....+..+. .
T Consensus 7 s~~~d~~v~v~d~~~---------~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~ 75 (391)
T 1l0q_A 7 ANSESDNISVIDVTS---------NKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-S 75 (391)
T ss_dssp EETTTTEEEEEETTT---------TEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-S
T ss_pred EcCCCCEEEEEECCC---------CeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-C
Confidence 345566777665432 13445566664 58999999999977 677799999999999999888776655 8
Q ss_pred eEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEE-EEEeCCCcEEEEEccCCeeeeE
Q 017314 133 VLDLAITHDNRSVIAA-SSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHV-VSAAYDRTLKVWDLHKGYCVNT 210 (373)
Q Consensus 133 v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-~s~s~D~~i~vwd~~~~~~~~~ 210 (373)
+.+++|+|++++++.+ +.++.|++||+.+++.+..+..| ..+.+++|++. ++.+ ++++.|+.|++||+.+++....
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~d-g~~l~~~~~~~~~v~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPD-GKKLYVTNNGDKTVSVINTVTKAVINT 153 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTT-SSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCC-CCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 9999999999987654 46799999999999988888765 46789999884 5555 7888999999999999999888
Q ss_pred EeecCceeEEEEccCCCEE-EEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEee---CCCeEEEEEc
Q 017314 211 IIFHSNCNALAFSMDGQTI-FSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSG---RDNLHNLFDI 286 (373)
Q Consensus 211 ~~~~~~~~~~~~~~~g~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~i~~~d~ 286 (373)
+..+..+..++|+|+|+++ ++++.|+.|++||+++++.+..+..+ ..+.+++|+|++++|++++ .++.+++||+
T Consensus 154 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 154 VSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS--SEEEEEEECTTSSEEEEEEECSSCCEEEEEET
T ss_pred EecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecC--CCccceEECCCCCEEEEEecCcCCCcEEEEEC
Confidence 8888888999999999988 57788999999999999888776644 5789999999999998887 6899999999
Q ss_pred cccceeeeeeecCCeeecCeeeeEECCCCcEE-EEEeCCCcEEEEEccCceEEEEeccCCccEE---EEE----------
Q 017314 287 RSLEVCGSLRATGNRVASNWSRSCISPDESYV-AAGSADGSVYIWSISKADIVRTLKEHTAPVL---SCS---------- 352 (373)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~---~~~---------- 352 (373)
.+.+....+..+... ..++++|+|++| ++++.|+.|++||+.+++.+..+..|..+.. .+.
T Consensus 232 ~~~~~~~~~~~~~~~-----~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (391)
T 1l0q_A 232 GTNKITARIPVGPDP-----AGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPS 306 (391)
T ss_dssp TTTEEEEEEECCSSE-----EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCB
T ss_pred CCCeEEEEEecCCCc-----cEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeecccccccccc
Confidence 988877776654332 346789999877 6778999999999999999988877665431 122
Q ss_pred --EcCCC----------CcEEEEeCCCeEEEcC
Q 017314 353 --WSGLG----------KPLASADKNGVVCVWT 373 (373)
Q Consensus 353 --~s~~g----------~~l~s~s~dg~i~iW~ 373 (373)
|+.+. ..+...+.|..+++|+
T Consensus 307 a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~ 339 (391)
T 1l0q_A 307 ADFKSNITSGYIFLSEPVQFTDLSKDATEWKWD 339 (391)
T ss_dssp CCEEESCCSSEEETTCCEEEEECCBSCSEEEEE
T ss_pred cccccccccccccccceEEEEeCCCCceEEEEE
Confidence 22221 2366667788888884
No 113
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=250.00 Aligned_cols=263 Identities=22% Similarity=0.323 Sum_probs=215.1
Q ss_pred cccceeeccccCccccccccccccceE--EecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccce
Q 017314 56 QVDGVVRRSEEGAEFFAESTVPSTCKH--KINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSV 133 (373)
Q Consensus 56 ~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v 133 (373)
..|+.++.|+... ..+.+ .+.+|...|++++|+|++++|++|+.|++|++||+++++.+..+.+|...+
T Consensus 42 g~D~tV~iWd~~t---------g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~ 112 (318)
T 4ggc_A 42 ALDNSVYLWSASS---------GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARV 112 (318)
T ss_dssp EETTEEEEEETTT---------CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCE
T ss_pred EeCCEEEEEECCC---------CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceE
Confidence 3567777776433 12333 345788899999999999999999999999999999999999999999888
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCC-eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeee---
Q 017314 134 LDLAITHDNRSVIAASSSNNLYVWDVNSG-RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVN--- 209 (373)
Q Consensus 134 ~~~~~~~~~~~l~s~s~d~~i~iwd~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~--- 209 (373)
.++. +++..+++++.++.+++|+.... ..+..+.+|...+..+.+.+ .+.++++++.|++|++||+++++...
T Consensus 113 ~~~~--~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 189 (318)
T 4ggc_A 113 GSLS--WNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPL 189 (318)
T ss_dssp EEEE--EETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCCS
T ss_pred EEee--cCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccce
Confidence 7655 46679999999999999998875 46678899999999999887 67899999999999999998765321
Q ss_pred -EE-eecCceeEEEEccCCCEE---EEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEee--CCCeEE
Q 017314 210 -TI-IFHSNCNALAFSMDGQTI---FSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSG--RDNLHN 282 (373)
Q Consensus 210 -~~-~~~~~~~~~~~~~~g~~l---~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~i~ 282 (373)
.. .....+.+++++|++..+ ++++.+++|++||............. ..+..+.|+|+++.+++++ .|+.|+
T Consensus 190 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~sg~~d~~i~ 267 (318)
T 4ggc_A 190 QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH--SQVCSILWSPHYKELISGHGFAQNQLV 267 (318)
T ss_dssp EEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECS--SCEEEEEEETTTTEEEEEECTTTCCEE
T ss_pred eeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccce--eeeeeeeecccccceEEEEEcCCCEEE
Confidence 11 223457889999876543 36778999999999988776655443 5799999999999887654 799999
Q ss_pred EEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCce
Q 017314 283 LFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKAD 336 (373)
Q Consensus 283 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~ 336 (373)
+||+++.+.+..+.+|...+. .++|+|+|++|+|||.||+|+|||+.+..
T Consensus 268 iwd~~~~~~~~~l~gH~~~V~----~l~~spdg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 268 IWKYPTMAKVAELKGHTSRVL----SLTMSPDGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEETTTCCEEEEECCCSSCEE----EEEECTTSSCEEEEETTTEEEEECCSCCC
T ss_pred EEECCCCcEEEEEcCCCCCEE----EEEEcCCCCEEEEEecCCeEEEEECCCCC
Confidence 999999999999988766554 47899999999999999999999987643
No 114
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.6e-34 Score=262.90 Aligned_cols=243 Identities=16% Similarity=0.213 Sum_probs=190.7
Q ss_pred EEecCccCcEEEEEEcCCCCEEEEe-----------eCCCcEEEEeCCCCceee----e-----ccccccceEEEEEcCC
Q 017314 82 HKINAHEGGCASILFEYNSARLISG-----------GQDKSIKLWDTNTGSLSS----T-----LYGCLGSVLDLAITHD 141 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~~~~~l~s~-----------s~D~~v~iwd~~~~~~~~----~-----~~~~~~~v~~~~~~~~ 141 (373)
..|.+|...|.+++++ ++.+++| +.|+++|+|++.+..... . ...+...+..++|+||
T Consensus 67 ~~l~~~~~~v~s~~~~--~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD 144 (365)
T 4h5i_A 67 FALEDNDDSPTAIDAS--KGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE 144 (365)
T ss_dssp EECCTTSCCCCEEEEE--TTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT
T ss_pred EEccCCCCceEEEEeC--CCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC
Confidence 4577898899888765 4555554 568889999986543211 1 1223345889999999
Q ss_pred CCEEEEEe--CCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe--ec-Cc
Q 017314 142 NRSVIAAS--SSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII--FH-SN 216 (373)
Q Consensus 142 ~~~l~s~s--~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~--~~-~~ 216 (373)
|+++++|+ .|++|+|||+.+++++..+. |...|.+++|+| ++.++++++. +.+++|+..++....... .+ ..
T Consensus 145 g~~la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (365)
T 4h5i_A 145 GTVAAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFST-DGKVVAYITG-SSLEVISTVTGSCIARKTDFDKNWS 221 (365)
T ss_dssp SSCEEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECT-TSSEEEEECS-SCEEEEETTTCCEEEEECCCCTTEE
T ss_pred CCEEEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEcc-CCceEEeccc-eeEEEEEeccCcceeeeecCCCCCC
Confidence 99987554 68999999999999988886 778899999998 6788888885 457777777776554332 22 34
Q ss_pred eeEEEEccCCCEEEEEeCCC----cEEEEECCCCee----eEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q 017314 217 CNALAFSMDGQTIFSGHIDG----NLRLWDIQTGKL----LSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRS 288 (373)
Q Consensus 217 ~~~~~~~~~g~~l~sg~~dg----~i~iwd~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~ 288 (373)
+.+++|+|++.++++++.|+ .+++||+..... ...+..|. ..|++++|+|+|++|++++.|+.|++||+++
T Consensus 222 v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 222 LSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRF-KGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSC-SCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred EEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCC-CCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 78999999999999999887 688999876643 23445554 6899999999999999999999999999999
Q ss_pred cceeeee-eecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccC
Q 017314 289 LEVCGSL-RATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISK 334 (373)
Q Consensus 289 ~~~~~~~-~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~ 334 (373)
++.+..+ .+|...+ ..++|+|||++|||||.|++|+||+++.
T Consensus 301 ~~~~~~~~~gH~~~V----~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 301 LSMSKIFKQAHSFAI----TEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TEEEEEETTSSSSCE----EEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred CcEEEEecCcccCCE----EEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 8887765 4565554 4588999999999999999999999964
No 115
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.1e-34 Score=251.75 Aligned_cols=229 Identities=19% Similarity=0.214 Sum_probs=188.4
Q ss_pred HHhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcCC--CCEEEEeeCCCcEEEEeCCCCc--eeeec
Q 017314 51 KLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEYN--SARLISGGQDKSIKLWDTNTGS--LSSTL 126 (373)
Q Consensus 51 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~D~~v~iwd~~~~~--~~~~~ 126 (373)
.+++...|+.++.|+.... ...+..++.+|.++|++++|+++ +++|+|||.|++|++||+.++. ....+
T Consensus 23 ~las~s~D~~v~iw~~~~~-------~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~ 95 (297)
T 2pm7_B 23 RMATCSSDKTIKIFEVEGE-------THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVH 95 (297)
T ss_dssp EEEEEETTSCEEEEEBCSS-------CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEE
T ss_pred EEEEEeCCCEEEEEecCCC-------CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEe
Confidence 4667778888888764321 12356788999999999999864 8999999999999999998874 45667
Q ss_pred cccccceEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCe--eEEEeecCCCcEEEEEEeeCC------------CCEEEE
Q 017314 127 YGCLGSVLDLAITHD--NRSVIAASSSNNLYVWDVNSGR--VRHTLTGHTDKVCAVDVSKIS------------SRHVVS 190 (373)
Q Consensus 127 ~~~~~~v~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~------------~~~~~s 190 (373)
.+|...|.+++|+|+ +.+|++++.|++|++||+.++. ....+.+|...|.+++|+|.. +.+|++
T Consensus 96 ~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~s 175 (297)
T 2pm7_B 96 AVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 175 (297)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEE
T ss_pred ecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEE
Confidence 789999999999998 8899999999999999998763 246778999999999998842 468999
Q ss_pred EeCCCcEEEEEccCCe----eeeEEeecC-ceeEEEEccCC---CEEEEEeCCCcEEEEECCCCe--ee-EEE--ecccc
Q 017314 191 AAYDRTLKVWDLHKGY----CVNTIIFHS-NCNALAFSMDG---QTIFSGHIDGNLRLWDIQTGK--LL-SEV--AAHSL 257 (373)
Q Consensus 191 ~s~D~~i~vwd~~~~~----~~~~~~~~~-~~~~~~~~~~g---~~l~sg~~dg~i~iwd~~~~~--~~-~~~--~~~~~ 257 (373)
|+.|++|++||++++. ...++..|. .+.+++|+|++ .+|++|+.|++|++||++++. .. ..+ ..+ .
T Consensus 176 gs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~-~ 254 (297)
T 2pm7_B 176 GGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKF-P 254 (297)
T ss_dssp EETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCC-S
T ss_pred EcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccC-C
Confidence 9999999999998765 445555554 58999999985 899999999999999997643 11 122 233 3
Q ss_pred cceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q 017314 258 AAVTSISLSRSGNIILTSGRDNLHNLFDIR 287 (373)
Q Consensus 258 ~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~ 287 (373)
..|.+++|+|++++|++++.|+.+++|+..
T Consensus 255 ~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 255 DVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp SCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 689999999999999999999999999975
No 116
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2.1e-34 Score=259.01 Aligned_cols=237 Identities=12% Similarity=0.120 Sum_probs=200.3
Q ss_pred ccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCe---eEEEeecCCCcEEEEEEeeCCCC-EEEEEeCCCcEEEEE
Q 017314 126 LYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR---VRHTLTGHTDKVCAVDVSKISSR-HVVSAAYDRTLKVWD 201 (373)
Q Consensus 126 ~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~-~~~s~s~D~~i~vwd 201 (373)
..+|.+.|.+++|+|++.+|++++.|+.|++||+.+++ ....+.+|...|.+++|++ ++. ++++|+.|++|++||
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd 85 (342)
T 1yfq_A 7 EQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEILKVD 85 (342)
T ss_dssp SSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEEEEC
T ss_pred ccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEEEEE
Confidence 45789999999999999999999999999999998876 3455668999999999998 578 899999999999999
Q ss_pred c-cCCeeeeEEe---ecCceeEEEEccCCCEEEEEeCCCcEEEEECCC---------CeeeEEEecccccceEEEEEcCC
Q 017314 202 L-HKGYCVNTII---FHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQT---------GKLLSEVAAHSLAAVTSISLSRS 268 (373)
Q Consensus 202 ~-~~~~~~~~~~---~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~---------~~~~~~~~~~~~~~v~~~~~~~~ 268 (373)
+ .++.. ..+. +...+.+++|+| +.++++++.|+.|++||+++ ++.+..+. +. ..+.+++|+|+
T Consensus 86 ~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~-~~v~~~~~~~~ 161 (342)
T 1yfq_A 86 LIGSPSF-QALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VK-NKIFTMDTNSS 161 (342)
T ss_dssp SSSSSSE-EECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SC-CCEEEEEECSS
T ss_pred eccCCce-EeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eC-CceEEEEecCC
Confidence 9 87765 3333 335689999999 99999999999999999987 66666555 43 78999999998
Q ss_pred CCEEEEeeCCCeEEEEEccc-cceee--eeeecCCeeecCeeeeEECC-CCcEEEEEeCCCcEEEEEccCc------eEE
Q 017314 269 GNIILTSGRDNLHNLFDIRS-LEVCG--SLRATGNRVASNWSRSCISP-DESYVAAGSADGSVYIWSISKA------DIV 338 (373)
Q Consensus 269 ~~~l~s~~~d~~i~~~d~~~-~~~~~--~~~~~~~~~~~~~~~~~~s~-~~~~l~sgs~Dg~i~iwd~~~~------~~~ 338 (373)
+ +++++.|+.+++||++. ..... ....+. .....++++| ++.+|++|+.||.|++|++... +..
T Consensus 162 ~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~----~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 162 R--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLK----YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp E--EEEEESTTEEEEEESSCCTTCCCEEEECSCS----SCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred c--EEEEeCCCeEEEEECCccccccceeeecCCC----CceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccc
Confidence 7 99999999999999987 44221 111122 2334578999 9999999999999999999877 777
Q ss_pred EEeccCCc---------cEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 339 RTLKEHTA---------PVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 339 ~~l~~h~~---------~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
..+..|.. +|.+++|+|++++|++++.||.|++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd 279 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN 279 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEc
Confidence 88888865 999999999999999999999999995
No 117
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-35 Score=275.37 Aligned_cols=245 Identities=11% Similarity=0.093 Sum_probs=204.6
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecccccc-----ceEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 017314 86 AHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLG-----SVLDLAITHDNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 160 (373)
.|...|.+++|||||.+||+++.||+|++||.++ ++..+. |.. .|.+++|+|||++|++|+.||+|+|||+.
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 5688899999999999999999999999999654 556666 655 59999999999999999999999999999
Q ss_pred CCe-------eEEEe----ecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCee---eeEEe-ec-CceeEEEEcc
Q 017314 161 SGR-------VRHTL----TGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYC---VNTII-FH-SNCNALAFSM 224 (373)
Q Consensus 161 ~~~-------~~~~~----~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~---~~~~~-~~-~~~~~~~~~~ 224 (373)
++. .+.++ .+|.+.|.+++|+| ++ +++++.|++|++||+..+.. .+++. .| ..+.+++|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs- 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV- 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE-
T ss_pred CCccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE-
Confidence 875 35676 67888999999998 44 88999999999999988763 24453 34 468999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEE--cCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCee
Q 017314 225 DGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISL--SRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRV 302 (373)
Q Consensus 225 ~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 302 (373)
|..|++++ +++|++||+.+++......+|. ..+.++.| +|++..|++++.|++ ++|....
T Consensus 236 -g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~-~~V~~va~~~s~d~~~La~a~edG~-klw~~d~-------------- 297 (588)
T 2j04_A 236 -DYKVVLTC-PGYVHKIDLKNYSISSLKTGSL-ENFHIIPLNHEKESTILLMSNKTSY-KVLLEDE-------------- 297 (588)
T ss_dssp -TTEEEEEC-SSEEEEEETTTTEEEEEECSCC-SCCCEEEETTCSSCEEEEECSSCEE-EEEESSS--------------
T ss_pred -CCEEEEEe-CCeEEEEECCCCeEEEEEcCCC-ceEEEEEeeeCCCCCEEEEEcCCCC-EEEeecc--------------
Confidence 68999887 6999999999887744443555 88999999 999999999999999 9998761
Q ss_pred ecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeC
Q 017314 303 ASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADK 365 (373)
Q Consensus 303 ~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~ 365 (373)
..++||+..+++. |+++++|+...+. +..+.+ ...|.+++|||||+.+|+++.
T Consensus 298 ------~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 298 ------LHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp ------EEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred ------EEECCCceEEEEc--CCEEEEEECCCCc-eeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 2478999888775 9999999975544 334444 667999999999999999874
No 118
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.2e-33 Score=253.30 Aligned_cols=252 Identities=18% Similarity=0.227 Sum_probs=206.1
Q ss_pred EeCCCCceeeeccccccceEEEEEcCC---CCEEEEEeCCCcEEEEEcCC-CeeE-EEeecCCCcEEEEEEeeCCCCEEE
Q 017314 115 WDTNTGSLSSTLYGCLGSVLDLAITHD---NRSVIAASSSNNLYVWDVNS-GRVR-HTLTGHTDKVCAVDVSKISSRHVV 189 (373)
Q Consensus 115 wd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~s~d~~i~iwd~~~-~~~~-~~~~~h~~~v~~~~~~~~~~~~~~ 189 (373)
|+....+....+.+|.+.|.+++|+|+ +++|++++.|+.|++||+.+ +... ..+.+|...|.+++|+| ++++++
T Consensus 24 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~ 102 (368)
T 3mmy_A 24 DNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSD-DGSKVF 102 (368)
T ss_dssp CSSCTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECT-TSSEEE
T ss_pred CCCCCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECc-CCCEEE
Confidence 345556677788999999999999999 59999999999999999987 5444 78899999999999998 678999
Q ss_pred EEeCCCcEEEEEccCCeeeeEEeecCceeEEEE--ccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcC
Q 017314 190 SAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAF--SMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSR 267 (373)
Q Consensus 190 s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~--~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (373)
+++.|++|++||+.++.......+...+.+++| +|++.+|++|+.||.|++||+++++.+..+..+. .+.++.+.
T Consensus 103 s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--~~~~~~~~- 179 (368)
T 3mmy_A 103 TASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE--RCYCADVI- 179 (368)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS--CEEEEEEE-
T ss_pred EEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC--CceEEEec-
Confidence 999999999999999988876666677999999 8999999999999999999999999888887764 56666665
Q ss_pred CCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCc----EEEEEeCCCcEEEEEccCc---eEEEE
Q 017314 268 SGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDES----YVAAGSADGSVYIWSISKA---DIVRT 340 (373)
Q Consensus 268 ~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~----~l~sgs~Dg~i~iwd~~~~---~~~~~ 340 (373)
...+++++.++.+.+|+++........... .........++.+++. .+++|+.||.|++|++... ..+..
T Consensus 180 -~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~ 256 (368)
T 3mmy_A 180 -YPMAVVATAERGLIVYQLENQPSEFRRIES--PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFT 256 (368)
T ss_dssp -TTEEEEEEGGGCEEEEECSSSCEEEEECCC--SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEE
T ss_pred -CCeeEEEeCCCcEEEEEeccccchhhhccc--cccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcccccee
Confidence 458888999999999999865432222111 1111112233333333 3999999999999999887 55677
Q ss_pred eccCCc------------cEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 341 LKEHTA------------PVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 341 l~~h~~------------~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+.+|.. +|.+++|+|+|++|++++.||.|++|+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd 301 (368)
T 3mmy_A 257 FKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWD 301 (368)
T ss_dssp EECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred eeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEE
Confidence 778876 799999999999999999999999995
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.1e-33 Score=256.55 Aligned_cols=244 Identities=15% Similarity=0.166 Sum_probs=183.8
Q ss_pred EEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeC
Q 017314 114 LWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAY 193 (373)
Q Consensus 114 iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~ 193 (373)
||++.+...+..+..|...|.+++|+||+++|++|+.++ ++|||+.+++.......+ .+..+.+.+.....+++++.
T Consensus 3 i~s~~~~~~~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 79 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR--HLSKVRMLHRTNYVAFVTGV 79 (355)
T ss_dssp ----------------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS--CCCEEEECTTSSEEEEECSS
T ss_pred cccccccCCccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC--CeEEEEEcCCCCEEEEEECC
Confidence 566777777777788999999999999999999887765 789999988766554433 46666776643334467888
Q ss_pred CCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEeCCCcEEEEECCCC-eeeEEEecccccceEEEEEcCCCCEE
Q 017314 194 DRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTG-KLLSEVAAHSLAAVTSISLSRSGNII 272 (373)
Q Consensus 194 D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l 272 (373)
|++|++||+.++.++..+.++..+.+++++++. ++++ .|+.|++||+.++ +.+..+.. ....+++++ .++
T Consensus 80 d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~--~~l 150 (355)
T 3vu4_A 80 KEVVHIWDDVKKQDVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR----FGGVCEFSN--GLL 150 (355)
T ss_dssp TTEEEEEETTTTEEEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE----EEEEEEEET--TEE
T ss_pred ccEEEEEECCCCcEEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc----CCceEEEEc--cEE
Confidence 999999999999999988888889999998764 4333 4889999999988 66655544 334556666 566
Q ss_pred EE--eeCCCeEEEEEccccc----------------eeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCc-EEEEEcc
Q 017314 273 LT--SGRDNLHNLFDIRSLE----------------VCGSLRATGNRVASNWSRSCISPDESYVAAGSADGS-VYIWSIS 333 (373)
Q Consensus 273 ~s--~~~d~~i~~~d~~~~~----------------~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~-i~iwd~~ 333 (373)
+. ++.|+.+++||+++.. ....+..|...+ ..++|+|+|.+|++|+.||+ |+|||+.
T Consensus 151 a~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v----~~~~~s~~g~~l~s~s~d~~~v~iwd~~ 226 (355)
T 3vu4_A 151 VYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPI----KMVRLNRKSDMVATCSQDGTIIRVFKTE 226 (355)
T ss_dssp EEEESSCTTCEEEEECCC------------------CCEEECCCSSCE----EEEEECTTSSEEEEEETTCSEEEEEETT
T ss_pred EEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCce----EEEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 65 6889999999998754 144555555444 45789999999999999999 9999999
Q ss_pred CceEEEEec-c-CCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 334 KADIVRTLK-E-HTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 334 ~~~~~~~l~-~-h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+++++..+. + |..+|.+++|+|+|++|++++.||+|+||+
T Consensus 227 ~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 227 DGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp TCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEE
T ss_pred CCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEE
Confidence 999999998 5 999999999999999999999999999995
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-33 Score=254.44 Aligned_cols=225 Identities=8% Similarity=0.059 Sum_probs=181.9
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEcc---------CCeee
Q 017314 138 ITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLH---------KGYCV 208 (373)
Q Consensus 138 ~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~---------~~~~~ 208 (373)
+.+++..+++|+.|++|++||+.+++.+..+. ...|.++.++|. +++++.|++|++|+.. ++..+
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 34677899999999999999999998887776 456666767663 9999999999999765 44444
Q ss_pred eEEeec--CceeEEEEcc--CCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEE
Q 017314 209 NTIIFH--SNCNALAFSM--DGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLF 284 (373)
Q Consensus 209 ~~~~~~--~~~~~~~~~~--~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~ 284 (373)
..+... ..+.+++++| ++.++++|+.||+|++||+++++.+.....+....+++++|+|++.+|++|+.|+.|++|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iw 197 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVY 197 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 444322 4589999999 999999999999999999999988776655555679999999999999999999999999
Q ss_pred Ecccccee-eeeee-cCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEecc---CCccEE--EEEEcCCC
Q 017314 285 DIRSLEVC-GSLRA-TGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE---HTAPVL--SCSWSGLG 357 (373)
Q Consensus 285 d~~~~~~~-~~~~~-~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~---h~~~V~--~~~~s~~g 357 (373)
|+++.+.. ..+.. |... +..++|+|+|.+|++|+. +.|++||+.+++.+..+.. |..++. +++|+|+|
T Consensus 198 d~~~~~~~~~~~~~~h~~~----v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 198 NLSSPDQASSRFPVDEEAK----IKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp ESSCTTSCCEECCCCTTSC----EEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred ECCCCCCCccEEeccCCCC----EEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCCC
Confidence 99988766 56655 4443 345789999999999994 4999999998877655543 444444 69999999
Q ss_pred CcEEEEeC-CCeEEEcC
Q 017314 358 KPLASADK-NGVVCVWT 373 (373)
Q Consensus 358 ~~l~s~s~-dg~i~iW~ 373 (373)
++|++++. |+.|+||+
T Consensus 273 ~~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 273 KNMIAYSNESNSLTIYK 289 (343)
T ss_dssp SEEEEEETTTTEEEEEE
T ss_pred CEEEEecCCCCcEEEEE
Confidence 99999998 99999994
No 121
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-32 Score=254.32 Aligned_cols=235 Identities=15% Similarity=0.159 Sum_probs=196.1
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCe---eEEEeec-------------------------------------
Q 017314 131 GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR---VRHTLTG------------------------------------- 170 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~---~~~~~~~------------------------------------- 170 (373)
.++.+++|+++|++|+++ .++.|++||+.+++ .+..+..
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 467889999999965554 67899999999988 6655553
Q ss_pred -----------------CCCcEEEEEEeeCCCCEE-EEEeCCCcEEEEEcc--CCeeeeEEee---cCceeEEEEccCCC
Q 017314 171 -----------------HTDKVCAVDVSKISSRHV-VSAAYDRTLKVWDLH--KGYCVNTIIF---HSNCNALAFSMDGQ 227 (373)
Q Consensus 171 -----------------h~~~v~~~~~~~~~~~~~-~s~s~D~~i~vwd~~--~~~~~~~~~~---~~~~~~~~~~~~g~ 227 (373)
|.+.|.+++|+| ++.+| ++|+.|++|++||+. ++.++..+.. ...+.+++|+|++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp ----------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 333799999998 46664 899999999999999 7877777643 35689999999999
Q ss_pred EEEEEeCCCcEEEEECCCCeeeE----EEecccccceEEEEEcCC---CCEEEEeeCCCeEEEEEccccceeeee-eecC
Q 017314 228 TIFSGHIDGNLRLWDIQTGKLLS----EVAAHSLAAVTSISLSRS---GNIILTSGRDNLHNLFDIRSLEVCGSL-RATG 299 (373)
Q Consensus 228 ~l~sg~~dg~i~iwd~~~~~~~~----~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~~~d~~~~~~~~~~-~~~~ 299 (373)
+|++|+.||.|++||+.+++... .+..|. ..|++++|+|+ +++|++++.|+.|++||+++......+ ..+.
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHV-SMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECS-SCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeeccc-CceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 99999999999999998876543 556665 78999999999 999999999999999999987766653 3444
Q ss_pred CeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEecc-------------------------CCccEEEEEEc
Q 017314 300 NRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE-------------------------HTAPVLSCSWS 354 (373)
Q Consensus 300 ~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~-------------------------h~~~V~~~~~s 354 (373)
..+ ..++|+ ++.+|++|+.|+.|++||+.+++++..+.. +...|.+++|+
T Consensus 242 ~~v----~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 242 HFV----SSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp SCE----EEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred Cce----EEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 333 447889 999999999999999999999998888763 23568999999
Q ss_pred CCCCcEEEEe-CCCeEEEcC
Q 017314 355 GLGKPLASAD-KNGVVCVWT 373 (373)
Q Consensus 355 ~~g~~l~s~s-~dg~i~iW~ 373 (373)
|++++|++++ .|+.|+||+
T Consensus 317 ~~~~~l~~~~~~d~~i~iw~ 336 (450)
T 2vdu_B 317 KNLPFVAFFVEATKCIIILE 336 (450)
T ss_dssp SSSSEEEEEETTCSEEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEE
Confidence 9999999998 899999995
No 122
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3e-32 Score=244.53 Aligned_cols=281 Identities=14% Similarity=0.169 Sum_probs=198.8
Q ss_pred HHhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcC--CCCEEEEeeCCCcEEEEeCCCC--------
Q 017314 51 KLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEY--NSARLISGGQDKSIKLWDTNTG-------- 120 (373)
Q Consensus 51 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~s~s~D~~v~iwd~~~~-------- 120 (373)
.++....|+.++.|+.... ..+......+.+|.+.|++++|+| ++.+|++|+.|++|++||+.++
T Consensus 25 ~l~~~~~dg~i~iw~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~ 99 (351)
T 3f3f_A 25 HVATCSSDQHIKVFKLDKD-----TSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRR 99 (351)
T ss_dssp EEEEEETTSEEEEEEECSS-----SCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCS
T ss_pred EEEEeeCCCeEEEEECCCC-----CCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccC
Confidence 3566677888887764421 112235667889999999999999 6999999999999999999887
Q ss_pred -ceeeeccccccceEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCeeEEEee-------------cCCCcEEEEEEeeC-
Q 017314 121 -SLSSTLYGCLGSVLDLAITHD--NRSVIAASSSNNLYVWDVNSGRVRHTLT-------------GHTDKVCAVDVSKI- 183 (373)
Q Consensus 121 -~~~~~~~~~~~~v~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~-------------~h~~~v~~~~~~~~- 183 (373)
+....+.+|...|.+++|+|+ +.++++++.|++|++||+.+++.+..+. +|...+.++.|+|.
T Consensus 100 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 179 (351)
T 3f3f_A 100 WNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSR 179 (351)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCS
T ss_pred cceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCC
Confidence 457778899999999999999 9999999999999999998876543332 68889999999985
Q ss_pred -CCCEEEEEeCCCcEEEEEccCCee--eeEEeec-CceeEEEEccCC----CEEEEEeCCCcEEEEECCCCeeeEEEecc
Q 017314 184 -SSRHVVSAAYDRTLKVWDLHKGYC--VNTIIFH-SNCNALAFSMDG----QTIFSGHIDGNLRLWDIQTGKLLSEVAAH 255 (373)
Q Consensus 184 -~~~~~~s~s~D~~i~vwd~~~~~~--~~~~~~~-~~~~~~~~~~~g----~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 255 (373)
.+..+++++.|+.+.+|+...+.. ...+..| ..+.+++|+|++ .+|++|+.||.|++||++++.........
T Consensus 180 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 259 (351)
T 3f3f_A 180 FSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEES 259 (351)
T ss_dssp SSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------
T ss_pred CCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCc
Confidence 478999999999998888877764 3344333 458999999998 89999999999999999876544333222
Q ss_pred cccceEEEEEcCCCCEEEEe----eCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEE
Q 017314 256 SLAAVTSISLSRSGNIILTS----GRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWS 331 (373)
Q Consensus 256 ~~~~v~~~~~~~~~~~l~s~----~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd 331 (373)
. ........++....+..+ +....+.+|+....+....+..|...+ ..++++|++++|++|+.||.|+||+
T Consensus 260 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v----~~~~~s~~~~~l~s~~~dg~v~iw~ 334 (351)
T 3f3f_A 260 L-TNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV----WSVSWNLTGTILSSAGDDGKVRLWK 334 (351)
T ss_dssp --------------------------------CCSEEEEEEEEECTTSSCE----EEEEECSSSCCEEEEETTSCEEEEE
T ss_pred c-cceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE----EEEEEcCCCCEEEEecCCCcEEEEe
Confidence 1 233333334443333333 334445566666666666666665544 3478999999999999999999999
Q ss_pred ccCceEEEEe
Q 017314 332 ISKADIVRTL 341 (373)
Q Consensus 332 ~~~~~~~~~l 341 (373)
+.+++.+..+
T Consensus 335 ~~~~~~~~~~ 344 (351)
T 3f3f_A 335 ATYSNEFKCM 344 (351)
T ss_dssp ECTTSCEEEE
T ss_pred cCcCcchhhe
Confidence 9987554443
No 123
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=100.00 E-value=4.1e-30 Score=245.08 Aligned_cols=287 Identities=13% Similarity=0.119 Sum_probs=227.9
Q ss_pred cceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeC--CCCceeeeccccccceEEEEEcC----CCCEEEEEeC-C
Q 017314 79 TCKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDT--NTGSLSSTLYGCLGSVLDLAITH----DNRSVIAASS-S 151 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~--~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~s~s~-d 151 (373)
.+..++..+.. ++.++|+|||++|++++.|++|++||+ .+++++.++.. ...+..++|+| ||+++++++. +
T Consensus 170 ~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~~va~sp~~~~dg~~l~v~~~~~ 247 (543)
T 1nir_A 170 KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEARSVESSKFKGYEDRYTIAGAYWP 247 (543)
T ss_dssp CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEES
T ss_pred eEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcceEEeCCCcCCCCCEEEEEEccC
Confidence 45566663333 889999999999999999999999999 88888887774 44578999999 9999998884 8
Q ss_pred CcEEEEEcCCCeeEEEeecC----------CC-cEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeee--EEeecCcee
Q 017314 152 NNLYVWDVNSGRVRHTLTGH----------TD-KVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVN--TIIFHSNCN 218 (373)
Q Consensus 152 ~~i~iwd~~~~~~~~~~~~h----------~~-~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~--~~~~~~~~~ 218 (373)
++|.+||..+++++.++..+ .. .+..+.+++....++++...+++|.+||+.+...+. .+.....+.
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~ 327 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLH 327 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCC
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCcc
Confidence 99999999999998888653 23 688888988667778888999999999998765443 344344577
Q ss_pred EEEEccCCCEEEEEe-CCCcEEEEECCCCeeeEEEec----ccccceEEEEEcCC-CCEEEEee-CCCeEEEEEccc---
Q 017314 219 ALAFSMDGQTIFSGH-IDGNLRLWDIQTGKLLSEVAA----HSLAAVTSISLSRS-GNIILTSG-RDNLHNLFDIRS--- 288 (373)
Q Consensus 219 ~~~~~~~g~~l~sg~-~dg~i~iwd~~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~s~~-~d~~i~~~d~~~--- 288 (373)
.++|+|+|+++++++ .+++|.+||+.+++++..+.. |. .....+ ++|+ +.++++++ .|++|.+||+.+
T Consensus 328 ~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~-g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~ 405 (543)
T 1nir_A 328 DGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP-GRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNH 405 (543)
T ss_dssp CEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCC-TTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred CceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCC-CCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCC
Confidence 899999999877654 589999999999999888764 32 223333 4676 66677765 589999999988
Q ss_pred ----cceeeeeeecCCeeecCeeeeEECCCCcEEEEEe-------CCCcEEEEEccCceEE-EEe--------ccCCccE
Q 017314 289 ----LEVCGSLRATGNRVASNWSRSCISPDESYVAAGS-------ADGSVYIWSISKADIV-RTL--------KEHTAPV 348 (373)
Q Consensus 289 ----~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs-------~Dg~i~iwd~~~~~~~-~~l--------~~h~~~V 348 (373)
++++.++..++.... .+.++|+|++|++++ .+++|.+||+.+++.. ..+ ..|...|
T Consensus 406 ~~~~~~~v~~l~~~g~~~~----~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~ 481 (543)
T 1nir_A 406 PQYAWKKVAELQGQGGGSL----FIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRV 481 (543)
T ss_dssp TTTBTSEEEEEECSCSCCC----CEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEE
T ss_pred chhcCeEEEEEEcCCCCce----EEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCce
Confidence 888888887654422 256899999999987 3789999999998776 553 4567789
Q ss_pred EEEEEcCCCCcEEEE-----eCCCeEEEcC
Q 017314 349 LSCSWSGLGKPLASA-----DKNGVVCVWT 373 (373)
Q Consensus 349 ~~~~~s~~g~~l~s~-----s~dg~i~iW~ 373 (373)
..+.|+|+|++|+.+ +.|+.|.|||
T Consensus 482 ~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D 511 (543)
T 1nir_A 482 VQPEYNKRGDEVWFSVWNGKNDSSALVVVD 511 (543)
T ss_dssp EEEEECSSSSEEEEEEECCTTSCCEEEEEE
T ss_pred EeccCCCCCCEEEEEeecCCCCCCeEEEEE
Confidence 999999999988765 3479999995
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=8.5e-30 Score=236.70 Aligned_cols=277 Identities=13% Similarity=0.126 Sum_probs=217.4
Q ss_pred ccCcEEEEE---EcCCCCEEEEe--------------eCCCcEEEEe--CCCC--ceeeeccccccceEEEEEcCCCCEE
Q 017314 87 HEGGCASIL---FEYNSARLISG--------------GQDKSIKLWD--TNTG--SLSSTLYGCLGSVLDLAITHDNRSV 145 (373)
Q Consensus 87 h~~~v~~~~---~~~~~~~l~s~--------------s~D~~v~iwd--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l 145 (373)
...++..++ |++++..++.. +.|+.++||. ..++ +....+..+ ..+.+++|+|++.++
T Consensus 59 ~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~ 137 (433)
T 3bws_A 59 KNIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLA 137 (433)
T ss_dssp TTEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEE
T ss_pred cCCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEE
Confidence 345667777 77777665543 3344334554 4334 444445443 345689999977777
Q ss_pred EEEeCCCcEEEEEcCCCeeEE-----EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeE
Q 017314 146 IAASSSNNLYVWDVNSGRVRH-----TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNA 219 (373)
Q Consensus 146 ~s~s~d~~i~iwd~~~~~~~~-----~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~ 219 (373)
++++.|++|++||+.+++... .+.+|...|.++++++ ++..+++++.|++|++||+.++..+..+..+. .+.+
T Consensus 138 ~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~ 216 (433)
T 3bws_A 138 IPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKI 216 (433)
T ss_dssp EEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEE
T ss_pred EEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeE
Confidence 888888999999999998877 4568999999999976 67789999999999999999988887776544 5889
Q ss_pred EEEccCCCEEE-EEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEee--------CCCeEEEEEccccc
Q 017314 220 LAFSMDGQTIF-SGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSG--------RDNLHNLFDIRSLE 290 (373)
Q Consensus 220 ~~~~~~g~~l~-sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--------~d~~i~~~d~~~~~ 290 (373)
++|+|++..++ +++.|+.|++||+++++.+..+..+ ..+.+++|+|+++++++++ .|+.+++||+++.+
T Consensus 217 ~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~ 294 (433)
T 3bws_A 217 LLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI--GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK 294 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC--SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE
T ss_pred EEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC--CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc
Confidence 99999999886 4558999999999999888777665 4699999999999999887 48899999999877
Q ss_pred eeeeeeecCCeeecCeeeeEECCCCcE-EEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeC----
Q 017314 291 VCGSLRATGNRVASNWSRSCISPDESY-VAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADK---- 365 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~s~~~~~-l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~---- 365 (373)
....+.... ....++++|++++ +++++.|+.|++||+.+++.+..+. +...+.+++|+|+|++|++++.
T Consensus 295 ~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~ 368 (433)
T 3bws_A 295 LIDTIGPPG-----NKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNH 368 (433)
T ss_dssp EEEEEEEEE-----CEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCC
T ss_pred EEeeccCCC-----CcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCc
Confidence 655543222 2234678999975 5677999999999999998888775 6778999999999999888876
Q ss_pred -----------CCeEEEcC
Q 017314 366 -----------NGVVCVWT 373 (373)
Q Consensus 366 -----------dg~i~iW~ 373 (373)
||.|++|+
T Consensus 369 ~~~~~~~~g~~dg~v~~~d 387 (433)
T 3bws_A 369 PTEGYLKKGLVLGKVYVID 387 (433)
T ss_dssp TTTCTTSCCSSCCEEEEEE
T ss_pred cccccccccccceEEEEEE
Confidence 57999995
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=5.2e-31 Score=230.81 Aligned_cols=199 Identities=12% Similarity=0.189 Sum_probs=155.3
Q ss_pred ccCcEEEEEEcCC----CCEEEEeeC--------------------CCcEEEEeC-CCCceeeeccccccceEEEEEcC-
Q 017314 87 HEGGCASILFEYN----SARLISGGQ--------------------DKSIKLWDT-NTGSLSSTLYGCLGSVLDLAITH- 140 (373)
Q Consensus 87 h~~~v~~~~~~~~----~~~l~s~s~--------------------D~~v~iwd~-~~~~~~~~~~~~~~~v~~~~~~~- 140 (373)
|...|.+++|+|| ++.+++++. |+.|++|++ ++++.+..+.+|...+..++|++
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~ 189 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEV 189 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeecc
Confidence 3446778888888 788887663 888999998 45777778888888888888888
Q ss_pred --CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC---cEEEEEEeeCCCCEE------------EEEeCCCcEEEEEcc
Q 017314 141 --DNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTD---KVCAVDVSKISSRHV------------VSAAYDRTLKVWDLH 203 (373)
Q Consensus 141 --~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~------------~s~s~D~~i~vwd~~ 203 (373)
++..|++++.|++|+|||+.++++++++.+|.. .+.+++|+| ++.++ +||+.|++|++||..
T Consensus 190 ~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 190 QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETT
T ss_pred CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 778999999999999999999999999987543 567778988 45554 678999999999999
Q ss_pred CCeeeeEEee----cCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCC
Q 017314 204 KGYCVNTIIF----HSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDN 279 (373)
Q Consensus 204 ~~~~~~~~~~----~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 279 (373)
++.++..+.. ......+..+.++.++++|+.|++|+|||+.+++++.++.+|....+.+++|+|+|++|++|+.|+
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECTTS
T ss_pred CCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEECCC
Confidence 9988765531 111123334445788999999999999999999999999988755566799999999999999999
Q ss_pred eEEEEEc
Q 017314 280 LHNLFDI 286 (373)
Q Consensus 280 ~i~~~d~ 286 (373)
+|++||+
T Consensus 349 TIklWd~ 355 (356)
T 2w18_A 349 NIFVYHY 355 (356)
T ss_dssp CEEEEEE
T ss_pred cEEEecC
Confidence 9999985
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=4.8e-31 Score=242.42 Aligned_cols=230 Identities=12% Similarity=0.079 Sum_probs=173.2
Q ss_pred HHhcccccceeeccccCccccccccccccceEEecCccCcEEEEEEcC--------CCCEEEEeeCCCcEEEEeCCCCce
Q 017314 51 KLAKQQVDGVVRRSEEGAEFFAESTVPSTCKHKINAHEGGCASILFEY--------NSARLISGGQDKSIKLWDTNTGSL 122 (373)
Q Consensus 51 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--------~~~~l~s~s~D~~v~iwd~~~~~~ 122 (373)
.++....|+.++.|+...... ........+.+|.+.|.+++|+| |+++|||||.|++|||||+.++..
T Consensus 103 ~las~~~d~~v~lw~~~~~~~----~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~ 178 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETI----ITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGP 178 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEE----EEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEE
T ss_pred EEEEEeCCCcEEEEECCCCcc----ceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCce
Confidence 356677788888876433210 11123345789999999999997 889999999999999999998888
Q ss_pred eeeccccccceEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCeeEEE-------------------------eecCCCcEE
Q 017314 123 SSTLYGCLGSVLDLAITHDNR-SVIAASSSNNLYVWDVNSGRVRHT-------------------------LTGHTDKVC 176 (373)
Q Consensus 123 ~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~-------------------------~~~h~~~v~ 176 (373)
...+.+|..+|.+++|+|++. +|++++.|++|++||+.+++.... ..+|...|.
T Consensus 179 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~ 258 (393)
T 4gq1_A 179 ILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLA 258 (393)
T ss_dssp EEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCS
T ss_pred eeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccce
Confidence 888889999999999999885 799999999999999987754322 246888899
Q ss_pred EEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-------------------ceeEEEEcc--CCCEEEEEeCC
Q 017314 177 AVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-------------------NCNALAFSM--DGQTIFSGHID 235 (373)
Q Consensus 177 ~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-------------------~~~~~~~~~--~g~~l~sg~~d 235 (373)
++.|.+.++..+++++.|+++++||+..+.....+..+. ......++| ++.++++|+.|
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~D 338 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQH 338 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTT
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCC
Confidence 999987788999999999999999998776544433221 111233444 44567788999
Q ss_pred CcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEc
Q 017314 236 GNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDI 286 (373)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~ 286 (373)
|+|++||+.+++.......|. ..|.+++|+|+|++|++++.++. .+|.+
T Consensus 339 g~V~lwd~~~~~~~~~~~~~~-~~V~svafspdG~~LA~as~~Gv-~lvrL 387 (393)
T 4gq1_A 339 GLIQLINTYEKDSNSIPIQLG-MPIVDFCWHQDGSHLAIATEGSV-LLTRL 387 (393)
T ss_dssp TEEEEEETTCTTCCEEEEECS-SCEEEEEECTTSSEEEEEESSEE-EEEEE
T ss_pred CEEEEEECCCCcEEEEecCCC-CcEEEEEEcCCCCEEEEEeCCCe-EEEEE
Confidence 999999999998888777776 68999999999999999987764 45554
No 127
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=2e-29 Score=234.38 Aligned_cols=210 Identities=21% Similarity=0.362 Sum_probs=181.3
Q ss_pred cceEEecCccCcEEEEEEcCCCC-EEEEeeCCCcEEEEeCCCCce-------eeeccccccceEEEEEcC-CCCEEEEEe
Q 017314 79 TCKHKINAHEGGCASILFEYNSA-RLISGGQDKSIKLWDTNTGSL-------SSTLYGCLGSVLDLAITH-DNRSVIAAS 149 (373)
Q Consensus 79 ~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~-------~~~~~~~~~~v~~~~~~~-~~~~l~s~s 149 (373)
.....+.+|...|++++|+|++. +|++|+.||+|++||+.++.. ...+.+|...|.+++|+| ++..+++++
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 45677889999999999999998 999999999999999987422 345668999999999999 678899999
Q ss_pred CCCcEEEEEcCCC---eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC-CeeeeEEeec-CceeEEEEcc
Q 017314 150 SSNNLYVWDVNSG---RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK-GYCVNTIIFH-SNCNALAFSM 224 (373)
Q Consensus 150 ~d~~i~iwd~~~~---~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~-~~~~~~~~~~-~~~~~~~~~~ 224 (373)
.|+.|++||++++ +....+..|...|.+++|+|.....+++|+.|++|++||++. +.++..+..| ..+.+++|+|
T Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECS
T ss_pred CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECC
Confidence 9999999999987 577788899999999999996666899999999999999987 4566666654 4689999999
Q ss_pred CCC-EEEEEeCCCcEEEEECCC--------------CeeeEEEecccccceEEEEEcCCCC-EEEEeeCCCeEEEEEccc
Q 017314 225 DGQ-TIFSGHIDGNLRLWDIQT--------------GKLLSEVAAHSLAAVTSISLSRSGN-IILTSGRDNLHNLFDIRS 288 (373)
Q Consensus 225 ~g~-~l~sg~~dg~i~iwd~~~--------------~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~ 288 (373)
++. +|++++.||.|++||+.. .+.+..+..|. ..|++++|+|+++ +|++++.|+.+++|++..
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHT-AKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCS-SCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCC-CCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 985 688999999999999986 24555555664 6899999999999 999999999999999875
Q ss_pred c
Q 017314 289 L 289 (373)
Q Consensus 289 ~ 289 (373)
.
T Consensus 411 ~ 411 (430)
T 2xyi_A 411 N 411 (430)
T ss_dssp H
T ss_pred c
Confidence 3
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=5.7e-29 Score=237.24 Aligned_cols=274 Identities=11% Similarity=0.081 Sum_probs=219.4
Q ss_pred EEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEc--CCCeeEEEeecCC
Q 017314 95 LFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDV--NSGRVRHTLTGHT 172 (373)
Q Consensus 95 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~--~~~~~~~~~~~h~ 172 (373)
.|+|++..+++++.|++|.+||..+++++.++..+.. +..++|+||+++|++++.|++|++||+ .+++++.++.. .
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-G 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-C
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-C
Confidence 3788999999999999999999999999888874333 889999999999999999999999999 88998888884 4
Q ss_pred CcEEEEEEeeC---CCCEEEEEe-CCCcEEEEEccCCeeeeEEeec------------CceeEEEEccCCCEE-EEEeCC
Q 017314 173 DKVCAVDVSKI---SSRHVVSAA-YDRTLKVWDLHKGYCVNTIIFH------------SNCNALAFSMDGQTI-FSGHID 235 (373)
Q Consensus 173 ~~v~~~~~~~~---~~~~~~s~s-~D~~i~vwd~~~~~~~~~~~~~------------~~~~~~~~~~~g~~l-~sg~~d 235 (373)
..+..++|+|. +++++++++ .+++|.+||..+++++.++..+ ..+..+.++|++..+ ++...+
T Consensus 222 ~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~ 301 (543)
T 1nir_A 222 IEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKET 301 (543)
T ss_dssp SEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTT
T ss_pred CCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCC
Confidence 56788999871 466777776 5899999999999888877542 147789999977654 567789
Q ss_pred CcEEEEECCCCeeeE--EEecccccceEEEEEcCCCCEEEEe-eCCCeEEEEEccccceeeeeeecCCeeecCeeeeEEC
Q 017314 236 GNLRLWDIQTGKLLS--EVAAHSLAAVTSISLSRSGNIILTS-GRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCIS 312 (373)
Q Consensus 236 g~i~iwd~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 312 (373)
+.|.+||..+.+.+. .+. + ...+..+.|+|+|++++++ ..++.|.+||..+++....+.....+..... ...++
T Consensus 302 g~i~vvd~~~~~~l~~~~i~-~-~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g-~~~~~ 378 (543)
T 1nir_A 302 GKVLLVNYKDIDNLTVTSIG-A-APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRG-ANFVH 378 (543)
T ss_dssp TEEEEEECTTSSSCEEEEEE-C-CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTC-EEEEE
T ss_pred CeEEEEEecCCCcceeEEec-c-CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCC-cccCC
Confidence 999999998876544 332 2 2467789999999977655 5689999999999888777654222221111 11246
Q ss_pred CC-CcEEEEEe-CCCcEEEEEccC-------ceEEEEeccCCccEEEEEEcCCCCcEEEEe-------CCCeEEEcC
Q 017314 313 PD-ESYVAAGS-ADGSVYIWSISK-------ADIVRTLKEHTAPVLSCSWSGLGKPLASAD-------KNGVVCVWT 373 (373)
Q Consensus 313 ~~-~~~l~sgs-~Dg~i~iwd~~~-------~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s-------~dg~i~iW~ 373 (373)
|+ +.++++++ .|++|.+||+.+ ++.++++.+|.+.+..++|||+|++|++++ .+++|.+|+
T Consensus 379 p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d 455 (543)
T 1nir_A 379 PKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFD 455 (543)
T ss_dssp TTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEE
T ss_pred CCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEE
Confidence 77 66777776 689999999998 899999999998899999999999999987 377999985
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=3.2e-29 Score=231.82 Aligned_cols=274 Identities=14% Similarity=0.125 Sum_probs=208.9
Q ss_pred CcEEEEEEcCCCC-EEEEee----CCC----cEEEEeC--CCCcee--eeccccccceEEEEEcC--------------C
Q 017314 89 GGCASILFEYNSA-RLISGG----QDK----SIKLWDT--NTGSLS--STLYGCLGSVLDLAITH--------------D 141 (373)
Q Consensus 89 ~~v~~~~~~~~~~-~l~s~s----~D~----~v~iwd~--~~~~~~--~~~~~~~~~v~~~~~~~--------------~ 141 (373)
..+....|++.|. .+++|+ .|| +|+|||+ .+++.+ ..+.+|...+..+++++ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 3455566777775 555776 467 9999999 888876 45778877776666553 2
Q ss_pred CCEEEEEeCC------CcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCC---cEEEEEccCCeeeeEEe
Q 017314 142 NRSVIAASSS------NNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDR---TLKVWDLHKGYCVNTII 212 (373)
Q Consensus 142 ~~~l~s~s~d------~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~---~i~vwd~~~~~~~~~~~ 212 (373)
+..++.++.+ ++|++||+.. .....+.+|...+.+++|+| +++.+++++.|+ +|++||+.++++.....
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~ 220 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQVAS 220 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEEEeec
Confidence 5666666654 7999999975 44667888999999999998 678899999885 99999999987764433
Q ss_pred ecCceeEEEEccCCCEEE-EEeCCCc--EEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeC-CC--eEEEEEc
Q 017314 213 FHSNCNALAFSMDGQTIF-SGHIDGN--LRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGR-DN--LHNLFDI 286 (373)
Q Consensus 213 ~~~~~~~~~~~~~g~~l~-sg~~dg~--i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~--~i~~~d~ 286 (373)
....+.+++|+|||+.|+ +++.|+. |++||+.+++. ..+..+. ..+.+++|+|+|++|+.++. ++ .+.+||+
T Consensus 221 ~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~ 298 (415)
T 2hqs_A 221 FPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGR-SNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNI 298 (415)
T ss_dssp CSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCS-SCEEEEEECTTSSEEEEEECTTSSCEEEEEET
T ss_pred CCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCC-CcccceEECCCCCEEEEEECCCCCcEEEEEEC
Confidence 445688999999999887 6776665 99999998875 4555554 67999999999998888776 44 5777788
Q ss_pred cccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCC---CcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEE
Q 017314 287 RSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSAD---GSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASA 363 (373)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~D---g~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~ 363 (373)
.+.+. ..+..+...+ ...+++|+|++|++++.+ +.|++||+.+++.. .+..|. .+.+++|+|+|++|+++
T Consensus 299 ~~~~~-~~l~~~~~~~----~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~~l~~~ 371 (415)
T 2hqs_A 299 NGGAP-QRITWEGSQN----QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGTMVIYS 371 (415)
T ss_dssp TSSCC-EECCCSSSEE----EEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSSEEEEE
T ss_pred CCCCE-EEEecCCCcc----cCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCCEEEEE
Confidence 76653 2233333222 246799999999988764 58999999988764 466665 89999999999999999
Q ss_pred eCCC---eEEEcC
Q 017314 364 DKNG---VVCVWT 373 (373)
Q Consensus 364 s~dg---~i~iW~ 373 (373)
+.++ .|++|+
T Consensus 372 s~~~~~~~l~~~d 384 (415)
T 2hqs_A 372 SSQGMGSVLNLVS 384 (415)
T ss_dssp EEETTEEEEEEEE
T ss_pred EcCCCccEEEEEE
Confidence 8877 688774
No 130
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=1.5e-27 Score=213.53 Aligned_cols=272 Identities=15% Similarity=0.185 Sum_probs=202.4
Q ss_pred EEcCCCCE-EEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCee-EEEeecC
Q 017314 95 LFEYNSAR-LISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASS-SNNLYVWDVNSGRV-RHTLTGH 171 (373)
Q Consensus 95 ~~~~~~~~-l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-d~~i~iwd~~~~~~-~~~~~~h 171 (373)
.|.+++++ +++++.++.|++||+.+++....+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+..+
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 45565554 7788889999999999998887777666667 9999999997777666 88999999999987 7777777
Q ss_pred CCcEEEEEEeeCCCCEEEEEeCCC---cEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEE-EeCCCc-EEEEECCCC
Q 017314 172 TDKVCAVDVSKISSRHVVSAAYDR---TLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFS-GHIDGN-LRLWDIQTG 246 (373)
Q Consensus 172 ~~~v~~~~~~~~~~~~~~s~s~D~---~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s-g~~dg~-i~iwd~~~~ 246 (373)
..+..+++++| ++++++++..++ .|.+||+.++..+..+..+.....++|+|+|+++++ +..++. |.+|++...
T Consensus 83 ~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 77766688988 567777554442 899999999998888877777899999999986655 455688 999998754
Q ss_pred eeeEEEe---cccccceEEEEEcCCCCEEE-EeeCCCeEEEEEccccce---eeeeeecCCeeecCeeeeEECCCCcEEE
Q 017314 247 KLLSEVA---AHSLAAVTSISLSRSGNIIL-TSGRDNLHNLFDIRSLEV---CGSLRATGNRVASNWSRSCISPDESYVA 319 (373)
Q Consensus 247 ~~~~~~~---~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~~d~~~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 319 (373)
..+.... .........++|+|+|++++ ++..++.+.+||+.+.+. ...+.... ....++++|||++|+
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~ 236 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNN-----LPGTIVVSRDGSTVY 236 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSS-----CCCCEEECTTSSEEE
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCC-----CCceEEECCCCCEEE
Confidence 3331110 11124578999999999654 455689999999988776 55554322 123467999999776
Q ss_pred EE-eCCCcEEEEEccCceE--EEEeccC----Ccc---EEEEEEcCCCCcEEEEe-CCCeEEEcC
Q 017314 320 AG-SADGSVYIWSISKADI--VRTLKEH----TAP---VLSCSWSGLGKPLASAD-KNGVVCVWT 373 (373)
Q Consensus 320 sg-s~Dg~i~iwd~~~~~~--~~~l~~h----~~~---V~~~~~s~~g~~l~s~s-~dg~i~iW~ 373 (373)
.+ ..++.|.+||+.+++. +..+..+ ..+ +..++|+|||++|+.++ .++.|.+|+
T Consensus 237 v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFT 301 (331)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence 55 4578899999998877 4444322 222 35689999999886554 567999995
No 131
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=1.9e-28 Score=243.08 Aligned_cols=281 Identities=13% Similarity=0.047 Sum_probs=215.5
Q ss_pred cCcEEEEEEcCCCCEEEEeeC-CC-----cEEEEeCCCCceeeeccccc------------------------cceEEEE
Q 017314 88 EGGCASILFEYNSARLISGGQ-DK-----SIKLWDTNTGSLSSTLYGCL------------------------GSVLDLA 137 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~-D~-----~v~iwd~~~~~~~~~~~~~~------------------------~~v~~~~ 137 (373)
...+.+++|+|||++|++++. |+ +|++||+.+++....+..+. ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 356889999999999999998 88 99999999988766555443 2378899
Q ss_pred EcCCCCEEEEEeCCCcEEEEEcCCCe--eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC
Q 017314 138 ITHDNRSVIAASSSNNLYVWDVNSGR--VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS 215 (373)
Q Consensus 138 ~~~~~~~l~s~s~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~ 215 (373)
|+|||++|++++. +.|++||+.++. ....+..|...+..+.|+| +++.+++++ ++.|.+||+.++........+.
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTTEEEECCCCCC
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCCCEEEeccCCc
Confidence 9999999999887 999999999882 3446777888999999998 677888877 5699999999887654332222
Q ss_pred c-----------------eeEEEEccCCCEEEEEeCCC---------------------------------cEEEEECCC
Q 017314 216 N-----------------CNALAFSMDGQTIFSGHIDG---------------------------------NLRLWDIQT 245 (373)
Q Consensus 216 ~-----------------~~~~~~~~~g~~l~sg~~dg---------------------------------~i~iwd~~~ 245 (373)
. +..++|+|||++|+.++.|+ .|.+||+.+
T Consensus 193 ~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~ 272 (741)
T 2ecf_A 193 TTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAE 272 (741)
T ss_dssp SSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSST
T ss_pred cceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCC
Confidence 1 36799999999999988776 789999988
Q ss_pred -CeeeEEEec-ccccceEEEEEcCCCCEEEEeeC-----CCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEE
Q 017314 246 -GKLLSEVAA-HSLAAVTSISLSRSGNIILTSGR-----DNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYV 318 (373)
Q Consensus 246 -~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~-----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 318 (373)
++....... .....+..++| |||++|+.++. +..+.+||+.+.+....+..+...........+|+|||+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~~~ 351 (741)
T 2ecf_A 273 QAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGSIL 351 (741)
T ss_dssp TCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSCEE
T ss_pred CCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCeEE
Confidence 775443322 12367899999 99999887653 56799999988776555544332110011235789999999
Q ss_pred EEEeCCCcEEEEEcc-CceEEEEeccCCccEEEE-EEcCCCCcEEE-EeCCC--eEEEcC
Q 017314 319 AAGSADGSVYIWSIS-KADIVRTLKEHTAPVLSC-SWSGLGKPLAS-ADKNG--VVCVWT 373 (373)
Q Consensus 319 ~sgs~Dg~i~iwd~~-~~~~~~~l~~h~~~V~~~-~~s~~g~~l~s-~s~dg--~i~iW~ 373 (373)
++++.||.++||.+. .+. ...+..|...|.++ +|||+|+.|+. ++.++ .++||+
T Consensus 352 ~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~ 410 (741)
T 2ecf_A 352 WSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYA 410 (741)
T ss_dssp EEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEE
T ss_pred EEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEE
Confidence 999999988888775 455 77888888889887 59999997754 45555 888884
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=3.4e-28 Score=224.86 Aligned_cols=265 Identities=14% Similarity=0.097 Sum_probs=206.6
Q ss_pred EEecCccCcEEEEEEcC--------------CCCEEEEeeCC------CcEEEEeCCCCceeeeccccccceEEEEEcCC
Q 017314 82 HKINAHEGGCASILFEY--------------NSARLISGGQD------KSIKLWDTNTGSLSSTLYGCLGSVLDLAITHD 141 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~--------------~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~ 141 (373)
..+.+|...+..+++++ .+.+++.++.+ ++|++||+.. .....+.+|...+.+++|+||
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g-~~~~~l~~~~~~v~~~~~Spd 189 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG-YNQFVVHRSPQPLMSPAWSPD 189 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-CSCEEEEEESSCEEEEEECTT
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-CCCEEEeCCCCcceeeEEcCC
Confidence 45777877777776664 26677777764 7999999974 456677788999999999999
Q ss_pred CCEEEEEeCCC---cEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEE-EEeCCCc--EEEEEccCCeeeeEEeecC
Q 017314 142 NRSVIAASSSN---NLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVV-SAAYDRT--LKVWDLHKGYCVNTIIFHS 215 (373)
Q Consensus 142 ~~~l~s~s~d~---~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~-s~s~D~~--i~vwd~~~~~~~~~~~~~~ 215 (373)
|+.|++++.++ .|++||+.+++.. .+..|...+.+++|+| +++.++ +++.|+. |.+||+.++..........
T Consensus 190 g~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~ 267 (415)
T 2hqs_A 190 GSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRS 267 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSS
T ss_pred CCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCC
Confidence 99999999885 9999999998875 5677888999999998 456555 7777665 9999998887643223334
Q ss_pred ceeEEEEccCCCEEEEEeC-CC--cEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCC---CeEEEEEcccc
Q 017314 216 NCNALAFSMDGQTIFSGHI-DG--NLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRD---NLHNLFDIRSL 289 (373)
Q Consensus 216 ~~~~~~~~~~g~~l~sg~~-dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---~~i~~~d~~~~ 289 (373)
.+.+++|+|||++|+.++. ++ .|.+||+.+++. ..+..+. ..+.+++|+|+|++|+.++.+ ..+.+||+.+.
T Consensus 268 ~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~ 345 (415)
T 2hqs_A 268 NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEG-SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG 345 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSS-SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTC
T ss_pred cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCC-CcccCeEECCCCCEEEEEECcCCceEEEEEECCCC
Confidence 5889999999999988776 45 677789988764 3344443 578899999999999988764 58999999877
Q ss_pred ceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCC---cEEEEEccCceEEEEeccCCccEEEEEEcCCCC
Q 017314 290 EVCGSLRATGNRVASNWSRSCISPDESYVAAGSADG---SVYIWSISKADIVRTLKEHTAPVLSCSWSGLGK 358 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg---~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~ 358 (373)
+.. .+..+. .....+++|+|++|++++.|+ .|++||+. +.....+.+|.+.|.+++|||.-.
T Consensus 346 ~~~-~l~~~~-----~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 346 GVQ-VLSSTF-----LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp CEE-ECCCSS-----SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred CEE-EecCCC-----CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 653 333222 233467999999999998877 79999987 556778899999999999999754
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.96 E-value=2.6e-26 Score=207.08 Aligned_cols=271 Identities=15% Similarity=0.135 Sum_probs=213.8
Q ss_pred ccCcEEEEEEcCCCCEEEEeeC-------CCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEE-eCCCcEEEEE
Q 017314 87 HEGGCASILFEYNSARLISGGQ-------DKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAA-SSSNNLYVWD 158 (373)
Q Consensus 87 h~~~v~~~~~~~~~~~l~s~s~-------D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd 158 (373)
....+..++|++++++|++++. ++.|.+||..+++....+... ..+..++|+|++++++.+ ..++.|.+||
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d 117 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAID 117 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEE
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEe
Confidence 3456789999999999988884 568999999999887776543 346789999999966554 5578999999
Q ss_pred cCCCeeEEEeecCCCc---------EEEEEEeeCCCCEEEEEe--CCCcEEEEEccCCeeeeEEe-ecCceeEEEEccCC
Q 017314 159 VNSGRVRHTLTGHTDK---------VCAVDVSKISSRHVVSAA--YDRTLKVWDLHKGYCVNTII-FHSNCNALAFSMDG 226 (373)
Q Consensus 159 ~~~~~~~~~~~~h~~~---------v~~~~~~~~~~~~~~s~s--~D~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~g 226 (373)
+.+++.+..+..+... +.++.++| +++.++.++ .++.|.+||..++.....+. ....+..++|+|+|
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 9999988888765432 67888988 455555544 58899999999998887776 34447889999999
Q ss_pred CEEEEEeCCCcEEEEECCCCeeeEEEecc---cccceEEEEEcCCCCEEEEeeC-CCeEEEEEccccceeeeeeecCCee
Q 017314 227 QTIFSGHIDGNLRLWDIQTGKLLSEVAAH---SLAAVTSISLSRSGNIILTSGR-DNLHNLFDIRSLEVCGSLRATGNRV 302 (373)
Q Consensus 227 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~~ 302 (373)
+++++++.++.|.+||+.+++.+..+... ....+..++|+|++++++.++. ++.+.+||..+.+....+.....
T Consensus 197 ~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-- 274 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-- 274 (353)
T ss_dssp TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--
T ss_pred CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--
Confidence 99999999999999999999988777652 1245788999999997766654 58999999998887766654321
Q ss_pred ecCeeeeEECCCCcEEEE-EeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCC
Q 017314 303 ASNWSRSCISPDESYVAA-GSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKN 366 (373)
Q Consensus 303 ~~~~~~~~~s~~~~~l~s-gs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~d 366 (373)
..++++|+|++++. +..++.|.+||..+++.+..+..+. .+.+++|+|+|++|+.+..+
T Consensus 275 ----~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 275 ----LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ----CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEEC
T ss_pred ----ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEcc
Confidence 23678999996555 4579999999999999988876544 67899999999977665554
No 134
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=7.7e-27 Score=209.43 Aligned_cols=268 Identities=14% Similarity=0.203 Sum_probs=190.7
Q ss_pred EEEEeeCCCcEEEEeCC-CCce-eeeccccccceEEEEEcCCCCEEEEEeCC-CcEEEEEcC--CCe--eEEEeecCCCc
Q 017314 102 RLISGGQDKSIKLWDTN-TGSL-SSTLYGCLGSVLDLAITHDNRSVIAASSS-NNLYVWDVN--SGR--VRHTLTGHTDK 174 (373)
Q Consensus 102 ~l~s~s~D~~v~iwd~~-~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-~~i~iwd~~--~~~--~~~~~~~h~~~ 174 (373)
.+++++.|+.|++||+. ++.. ......+...+..++|+|++++|++++.+ +.|++|++. +++ .+..+..+. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 34555789999999985 3322 12223466778899999999999988887 899999997 554 344555444 7
Q ss_pred EEEEEEeeCCCCEEEEEe-CCCcEEEEEc---cCCeeeeEEeecCceeEEEEccCCCEEEEEe-CCCcEEEEECCC-Cee
Q 017314 175 VCAVDVSKISSRHVVSAA-YDRTLKVWDL---HKGYCVNTIIFHSNCNALAFSMDGQTIFSGH-IDGNLRLWDIQT-GKL 248 (373)
Q Consensus 175 v~~~~~~~~~~~~~~s~s-~D~~i~vwd~---~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~-~dg~i~iwd~~~-~~~ 248 (373)
+..++|+| +++++++++ .++.|.+||+ ........+..+..+.+++|+|+|+++++++ .++.|++||+.+ ++.
T Consensus 86 ~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 86 LTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CcEEEEcC-CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 78899988 456665554 5899999999 4444555555556688999999999888877 899999999987 654
Q ss_pred eE----EEecccccceEEEEEcCCCCEEEEe-eCCCeEEEEEccc--cce--eeeeeecCCe--eecCeeeeEECCCCcE
Q 017314 249 LS----EVAAHSLAAVTSISLSRSGNIILTS-GRDNLHNLFDIRS--LEV--CGSLRATGNR--VASNWSRSCISPDESY 317 (373)
Q Consensus 249 ~~----~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~i~~~d~~~--~~~--~~~~~~~~~~--~~~~~~~~~~s~~~~~ 317 (373)
.. .+..+....+..++|+|++++++.+ ..++.+.+||+.. .+. ...+...... .......++++|+|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCE
Confidence 32 2333333578889999999977555 4789999999853 221 1111111100 0111224679999988
Q ss_pred EE-EEeCCCcEEEEEcc----CceEEEEeccCCccEEEEEEcCCCCcEEEEe-CCCeEEEc
Q 017314 318 VA-AGSADGSVYIWSIS----KADIVRTLKEHTAPVLSCSWSGLGKPLASAD-KNGVVCVW 372 (373)
Q Consensus 318 l~-sgs~Dg~i~iwd~~----~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s-~dg~i~iW 372 (373)
|+ +++.|+.|++|++. ..+.+..+..+.. +.+++|+|+|++|++++ .++.|.+|
T Consensus 245 l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~ 304 (343)
T 1ri6_A 245 LYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVY 304 (343)
T ss_dssp EEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEE
T ss_pred EEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEE
Confidence 77 55689999999998 2345555555544 88999999999888877 68999999
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.96 E-value=3.4e-27 Score=206.88 Aligned_cols=253 Identities=14% Similarity=0.118 Sum_probs=192.5
Q ss_pred EeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCC-CeeEEEeecCC-CcEEEEEEee
Q 017314 105 SGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNS-GRVRHTLTGHT-DKVCAVDVSK 182 (373)
Q Consensus 105 s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~-~~~~~~~~~h~-~~v~~~~~~~ 182 (373)
+++.|++|++||+.+++.. .+..|...|.+++|+|++++|++++ ++.|++||+.+ ++....+.+|. ..+.++.|+|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred CCCcceeEEEEeCCCCcee-eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 4578999999999988765 4556888999999999999999876 78999999999 88777776664 6788899988
Q ss_pred CCCCEEEEEe--CCCcEEEEEc--cCCeeeeEEeecCceeEEEEccCCCEEE-EEeCCCcEEEEECC--CCeeeEEEecc
Q 017314 183 ISSRHVVSAA--YDRTLKVWDL--HKGYCVNTIIFHSNCNALAFSMDGQTIF-SGHIDGNLRLWDIQ--TGKLLSEVAAH 255 (373)
Q Consensus 183 ~~~~~~~s~s--~D~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~g~~l~-sg~~dg~i~iwd~~--~~~~~~~~~~~ 255 (373)
+++++++++ .++..+||.+ ..+. ...+..+..+..++|+|+|++|+ +++.|+.+++|++. +++ ...+..+
T Consensus 95 -dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~ 171 (297)
T 2ojh_A 95 -DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHG 171 (297)
T ss_dssp -TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCS
T ss_pred -CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccC
Confidence 577888888 4456666655 4443 33344445588899999999887 78889999999863 333 3444444
Q ss_pred cccceEEEEEcCCCCEEEEee-CCCeEEEEEcc-ccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCC---------
Q 017314 256 SLAAVTSISLSRSGNIILTSG-RDNLHNLFDIR-SLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSAD--------- 324 (373)
Q Consensus 256 ~~~~v~~~~~~~~~~~l~s~~-~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~D--------- 324 (373)
. ..+.+++|+|++++|+.++ .++.+++|++. .......+..+... ....+++|+|++|++++.+
T Consensus 172 ~-~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~s~dg~~l~~~~~~~~~~~~~~~ 246 (297)
T 2ojh_A 172 E-GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYG----DWFPHPSPSGDKVVFVSYDADVFDHPRD 246 (297)
T ss_dssp S-SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEE----EEEEEECTTSSEEEEEEEETTCCSCCSS
T ss_pred C-CccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcc----cCCeEECCCCCEEEEEEcCCCCCccccc
Confidence 3 6789999999999887665 58899999986 33334444333322 2346789999999988876
Q ss_pred --CcEEEEEccCceE--EEEeccCCccEEEEEEcCCCCcEEEEeCCC
Q 017314 325 --GSVYIWSISKADI--VRTLKEHTAPVLSCSWSGLGKPLASADKNG 367 (373)
Q Consensus 325 --g~i~iwd~~~~~~--~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg 367 (373)
+.|++||+.+++. +..+.+|...+.+++|+|+|++|++++.|.
T Consensus 247 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 247 LDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred CceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 5699999988765 444557888999999999999998887764
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.95 E-value=3.3e-26 Score=204.83 Aligned_cols=262 Identities=10% Similarity=0.105 Sum_probs=200.2
Q ss_pred CEEEEeeCCCcEEEEeCCCCceeeecccccc--ceEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCeeEEEeecC-----C
Q 017314 101 ARLISGGQDKSIKLWDTNTGSLSSTLYGCLG--SVLDLAITHDNRSVI-AASSSNNLYVWDVNSGRVRHTLTGH-----T 172 (373)
Q Consensus 101 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~h-----~ 172 (373)
.+|++++.|++|++||+.+++....+..... .+..++|+|+++.++ +++.++.|.+||+.+++.+..+... .
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 4789999999999999999988776653221 478899999998765 5556789999999999887766532 2
Q ss_pred CcEEEEEEeeCCCCEEEEEe------------CCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEeCCCcEEE
Q 017314 173 DKVCAVDVSKISSRHVVSAA------------YDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGHIDGNLRL 240 (373)
Q Consensus 173 ~~v~~~~~~~~~~~~~~s~s------------~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~i 240 (373)
..+..+.++| +++.+++++ .++.|.+||+.++.....+.....+..++|+|+|++|+++ ++.|.+
T Consensus 82 ~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEE
Confidence 2566788887 566777765 5799999999998888777766678889999999988887 689999
Q ss_pred EECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCC-C-----------------------eEEEEEccccceeeeee
Q 017314 241 WDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRD-N-----------------------LHNLFDIRSLEVCGSLR 296 (373)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-~-----------------------~i~~~d~~~~~~~~~~~ 296 (373)
||+.+++.+..+..+.. ...+.|+|++..++..+.+ + .+.+||+.+.+.. .+.
T Consensus 159 ~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~ 235 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSW--EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MRE 235 (337)
T ss_dssp EETTTTEEEEEECSTTT--TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEE
T ss_pred EECCCCcEeeeeecccc--CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-Eee
Confidence 99999988777655431 1123788998876554433 2 3678998877654 222
Q ss_pred ecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 297 ATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
... .......++++|+|++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|+|++|++++.++.|++|+
T Consensus 236 ~~~--~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i~v~d 307 (337)
T 1pby_B 236 VRI--MDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDLAAYD 307 (337)
T ss_dssp EEE--CSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEEEEEE
T ss_pred cCC--CCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcEEEEE
Confidence 111 11122346799999999988 799999999999888877644 4568999999999999999999999995
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=2e-27 Score=234.93 Aligned_cols=279 Identities=10% Similarity=0.079 Sum_probs=203.0
Q ss_pred EEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecccccc---ceEEEEEcCCCCEEEEEeCC---------CcEEEEE
Q 017314 91 CASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLG---SVLDLAITHDNRSVIAASSS---------NNLYVWD 158 (373)
Q Consensus 91 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~s~d---------~~i~iwd 158 (373)
..+++|+|||+++++ +.|++|++||+.+++....+.+|.. .|.+++|+|||++|++++.+ +.+++||
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 456889999997766 7899999999999988777776654 48999999999999999875 7788999
Q ss_pred cCCCeeEEEe---ecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-Cce-----------------
Q 017314 159 VNSGRVRHTL---TGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNC----------------- 217 (373)
Q Consensus 159 ~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~----------------- 217 (373)
+.+++. ..+ .+|...+..++|+| +++.+++++. +.|++||+.++........+ ..+
T Consensus 98 ~~~~~~-~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 98 IPHGDP-QSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp SSSCCC-EECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred CCCCce-EeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 998876 233 34555588889998 5777887775 79999999988765544332 222
Q ss_pred -eEEEEccCCCEEEEEeCCC----------------------------------cEEEEECCCCeeeEEEeccc-----c
Q 017314 218 -NALAFSMDGQTIFSGHIDG----------------------------------NLRLWDIQTGKLLSEVAAHS-----L 257 (373)
Q Consensus 218 -~~~~~~~~g~~l~sg~~dg----------------------------------~i~iwd~~~~~~~~~~~~~~-----~ 257 (373)
..++|+|||+.|+.++.|+ .|++||+.+++....+..+. .
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 254 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE 254 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcc
Confidence 6899999999999887653 79999999887655565431 3
Q ss_pred cceEEEEEcCCCCEEEEeeC----CCeEEEEEccccceeeeeeecC-CeeecCeeeeEECCCCcEEEE--EeCCC-----
Q 017314 258 AAVTSISLSRSGNIILTSGR----DNLHNLFDIRSLEVCGSLRATG-NRVASNWSRSCISPDESYVAA--GSADG----- 325 (373)
Q Consensus 258 ~~v~~~~~~~~~~~l~s~~~----d~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~l~s--gs~Dg----- 325 (373)
..+.+++|+|||++|++.+. +..+.+||+.+.+....+..+. ..+.......+|+|||++|+. +..|+
T Consensus 255 ~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 334 (723)
T 1xfd_A 255 YYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKF 334 (723)
T ss_dssp EEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCE
T ss_pred ceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcce
Confidence 57899999999998876643 3578999998876554443321 111100023579999997764 45677
Q ss_pred -cEEEEE-ccCce--EEEEeccCCccEEE-EEEcCCCCcEEEEeCC---CeEEEcC
Q 017314 326 -SVYIWS-ISKAD--IVRTLKEHTAPVLS-CSWSGLGKPLASADKN---GVVCVWT 373 (373)
Q Consensus 326 -~i~iwd-~~~~~--~~~~l~~h~~~V~~-~~~s~~g~~l~s~s~d---g~i~iW~ 373 (373)
.|++|| ...+. ....+..+...+.. ++|||||++|+..+.+ +.++||+
T Consensus 335 ~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~ 390 (723)
T 1xfd_A 335 YHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYS 390 (723)
T ss_dssp EEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEE
T ss_pred eEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEE
Confidence 577777 34443 14555544445554 6999999999876665 7888883
No 138
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.95 E-value=9.1e-26 Score=217.76 Aligned_cols=271 Identities=14% Similarity=0.090 Sum_probs=196.4
Q ss_pred cCcEEEEEEcCCCCEEEEeeC-CCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeC---CCcEEEEEcCC--
Q 017314 88 EGGCASILFEYNSARLISGGQ-DKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASS---SNNLYVWDVNS-- 161 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~-D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~---d~~i~iwd~~~-- 161 (373)
..+|++++|+|||++||+++. |++++||++.++........+...+..++|+|| +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 457999999999999999987 999999999766654444333368999999999 77777765 45566665432
Q ss_pred -CeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEeCC----C
Q 017314 162 -GRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGHID----G 236 (373)
Q Consensus 162 -~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~d----g 236 (373)
+... .+..+. .+...+++|.....+++.+.++.+.+||+.++........+. .+++|+|||++|++++.| +
T Consensus 100 ~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 100 PGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCe
Confidence 2222 333222 233557777554545544445555599999887655443333 789999999999988877 7
Q ss_pred cEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCC--eEEEEEccccceeeeeeecCCeeec----CeeeeE
Q 017314 237 NLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDN--LHNLFDIRSLEVCGSLRATGNRVAS----NWSRSC 310 (373)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~----~~~~~~ 310 (373)
.|++||+.+++.. .+..+. ..+..++|+|||+.|+++..++ .+.+||+.+.+.. .+..+...+.. .+...+
T Consensus 176 ~i~~~d~~~g~~~-~l~~~~-~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 252 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDSGE-GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLG 252 (582)
T ss_dssp EEEEEETTTCCCE-EECCSS-CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEE
T ss_pred EEEEEcCCCCCce-EeecCC-CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcccccee
Confidence 8999999988754 555554 6789999999999999888888 8999999887665 44333322211 111223
Q ss_pred ECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCe---EEEc
Q 017314 311 ISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGV---VCVW 372 (373)
Q Consensus 311 ~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~---i~iW 372 (373)
++|||.++++++.||++++|++ ++... .+.+.|.+++|+ +|+++++++.+.+ |.+|
T Consensus 253 ~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~ 311 (582)
T 3o4h_A 253 YLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSL 311 (582)
T ss_dssp ECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEE
Confidence 8999999999999999999999 66554 345678999999 9999999888754 5444
No 139
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=2.9e-25 Score=228.02 Aligned_cols=282 Identities=11% Similarity=0.076 Sum_probs=208.9
Q ss_pred eEEecCccCcEEEEEEcCCCCEEEEeeCC------CcEEEEeCCCCceeeeccccccce-------EEEEEcCCCCEEEE
Q 017314 81 KHKINAHEGGCASILFEYNSARLISGGQD------KSIKLWDTNTGSLSSTLYGCLGSV-------LDLAITHDNRSVIA 147 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~l~s 147 (373)
...+.+|.+.+.+++|||||++||.++.+ ..|++||+.++. ...+..|...+ ..++|+|||+.+++
T Consensus 45 ~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~-~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~ 123 (1045)
T 1k32_A 45 TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGE-IKRITYFSGKSTGRRMFTDVAGFDPDGNLIIS 123 (1045)
T ss_dssp EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTE-EEECCCCCEEEETTEECSEEEEECTTCCEEEE
T ss_pred EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCC-eEEcccCCCcccccccccccccCCCCCEEEEE
Confidence 45678899999999999999999988654 479999998876 56677788887 89999999997777
Q ss_pred EeCC------CcEEEEEcCCCeeEE-------------------------------------------------EeecCC
Q 017314 148 ASSS------NNLYVWDVNSGRVRH-------------------------------------------------TLTGHT 172 (373)
Q Consensus 148 ~s~d------~~i~iwd~~~~~~~~-------------------------------------------------~~~~h~ 172 (373)
++.+ ..|.+||+.+++... .+.+|.
T Consensus 124 ~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~ 203 (1045)
T 1k32_A 124 TDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMS 203 (1045)
T ss_dssp ECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCS
T ss_pred ECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCC
Confidence 7654 357788876654321 224456
Q ss_pred CcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC-CeeeeEEeecC------------------------------------
Q 017314 173 DKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK-GYCVNTIIFHS------------------------------------ 215 (373)
Q Consensus 173 ~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~-~~~~~~~~~~~------------------------------------ 215 (373)
..+.++.|++ + ..+++++.|+++++|.+.. +.....+..+.
T Consensus 204 ~~v~~~~~s~-d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~~l~ 281 (1045)
T 1k32_A 204 THVSSPVIVG-H-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIEKIE 281 (1045)
T ss_dssp SCCEEEEEET-T-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEETTEEEEECTTTCCEEECC
T ss_pred CcccceEEeC-C-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEeCCEEEEecCCceEeeeec
Confidence 6666777765 2 5666778888888887642 11111111110
Q ss_pred ---------------ceeEEEEc-cCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCC
Q 017314 216 ---------------NCNALAFS-MDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDN 279 (373)
Q Consensus 216 ---------------~~~~~~~~-~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~ 279 (373)
.+..++|+ |||++|++++ ++.|.+|++.+++.. .+..+....+..++|+ +|+.|+.++.+.
T Consensus 282 ~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~ 358 (1045)
T 1k32_A 282 IGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREG 358 (1045)
T ss_dssp CCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTE
T ss_pred cCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceE-EccCCCcceEEeeeEc-CCCeEEEEECCC
Confidence 25667788 8888777766 677888888776543 3444442378899999 999999988887
Q ss_pred eEE-EEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCC
Q 017314 280 LHN-LFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGK 358 (373)
Q Consensus 280 ~i~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~ 358 (373)
.+. +||+...+.. .+..+. .....++++|||++|++++.++.|++||+.+++....+.+|.+.|.+++|||||+
T Consensus 359 ~l~~~~d~~~~~~~-~l~~~~----~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~ 433 (1045)
T 1k32_A 359 DFLGIYDYRTGKAE-KFEENL----GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSR 433 (1045)
T ss_dssp EEEEEEETTTCCEE-ECCCCC----CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSC
T ss_pred ceEEEEECCCCCce-EecCCc----cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCC
Confidence 888 8898765432 222222 2234578999999999999999999999999998888888999999999999999
Q ss_pred cEEEEeCCC----------eEEEcC
Q 017314 359 PLASADKNG----------VVCVWT 373 (373)
Q Consensus 359 ~l~s~s~dg----------~i~iW~ 373 (373)
+|++++.++ .|++|+
T Consensus 434 ~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 434 FIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp EEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred eEEEEecCccccccCCCCCeEEEEE
Confidence 999887754 899985
No 140
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=4.3e-25 Score=217.76 Aligned_cols=275 Identities=13% Similarity=0.116 Sum_probs=200.4
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCC-----Ce
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNS-----GR 163 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~-----~~ 163 (373)
..|.+++|+|| +.++.+ .|++|++||+.+++... +..+...+.+++|+|||+.|+++ .|+.|++||+.+ ++
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~-l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~ 157 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTY-LFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSR 157 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEE-EECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEE-ccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCC
Confidence 57999999999 666555 45999999999886543 34456678889999999999884 789999999998 87
Q ss_pred eEEEeecCCCc--------------EEEEEEeeCCCCEEEEEe---------------------------------CCCc
Q 017314 164 VRHTLTGHTDK--------------VCAVDVSKISSRHVVSAA---------------------------------YDRT 196 (373)
Q Consensus 164 ~~~~~~~h~~~--------------v~~~~~~~~~~~~~~s~s---------------------------------~D~~ 196 (373)
.......+... +.++.|+| ++++|++++ .+..
T Consensus 158 ~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~ 236 (706)
T 2z3z_A 158 AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVT 236 (706)
T ss_dssp CEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEE
T ss_pred cEEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeE
Confidence 66555444443 37888998 678888887 4477
Q ss_pred EEEEEccCCeeeeEEee--c-CceeEEEEccCCCEEEEEeCCC-----cEEEEECCCCeeeEEEe-ccccc---ceEEEE
Q 017314 197 LKVWDLHKGYCVNTIIF--H-SNCNALAFSMDGQTIFSGHIDG-----NLRLWDIQTGKLLSEVA-AHSLA---AVTSIS 264 (373)
Q Consensus 197 i~vwd~~~~~~~~~~~~--~-~~~~~~~~~~~g~~l~sg~~dg-----~i~iwd~~~~~~~~~~~-~~~~~---~v~~~~ 264 (373)
|.+||+.++........ + ..+..++|+|||++|++++.|+ .|++||+.+++....+. ..... .+.++.
T Consensus 237 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 237 VGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLT 316 (706)
T ss_dssp EEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCE
T ss_pred EEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCce
Confidence 99999998875443321 1 3478999999999999888776 89999999984333332 22211 246789
Q ss_pred EcC--CCCEEEEeeCCCeEEEEEcc-ccceeeeeeecCCeeecCeeeeEECCCCcEEEEEe-CCC----cEEEEEccCce
Q 017314 265 LSR--SGNIILTSGRDNLHNLFDIR-SLEVCGSLRATGNRVASNWSRSCISPDESYVAAGS-ADG----SVYIWSISKAD 336 (373)
Q Consensus 265 ~~~--~~~~l~s~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs-~Dg----~i~iwd~~~~~ 336 (373)
|+| +|+++++++.|+.+++|++. .......+..+...+. ...+++|+|++|+.++ .++ .|+.||+.+++
T Consensus 317 ~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~---~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVT---NFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp ECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEE---EEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred eecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEE---eeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 999 99999999999999999876 4444444443322221 1257899998876554 444 67777777665
Q ss_pred EEEEeccCCccEEEEEEcCCCCcEEEEeCC----CeEEEcC
Q 017314 337 IVRTLKEHTAPVLSCSWSGLGKPLASADKN----GVVCVWT 373 (373)
Q Consensus 337 ~~~~l~~h~~~V~~~~~s~~g~~l~s~s~d----g~i~iW~ 373 (373)
...+. |...+.+++|||||++|+.+..+ +.|.+|+
T Consensus 394 -~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 394 -TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp -CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEE
T ss_pred -ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEE
Confidence 34443 67779999999999988876444 5688884
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=2.5e-25 Score=220.67 Aligned_cols=267 Identities=14% Similarity=0.106 Sum_probs=200.3
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc--eeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q 017314 90 GCASILFEYNSARLISGGQDKSIKLWDTNTGS--LSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHT 167 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 167 (373)
.+.+++|+|||++|++++. +.|++||+.++. ....+..+...+..++|+|||++|++++. +.|++||+.+++....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEe
Confidence 3789999999999999987 999999999873 34556677788999999999999998874 5899999999887665
Q ss_pred eecCCCc----------------EEEEEEeeCCCCEEEEEeCCC---------------------------------cEE
Q 017314 168 LTGHTDK----------------VCAVDVSKISSRHVVSAAYDR---------------------------------TLK 198 (373)
Q Consensus 168 ~~~h~~~----------------v~~~~~~~~~~~~~~s~s~D~---------------------------------~i~ 198 (373)
...+... +..+.|+| +++.|++++.|+ .|.
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~ 266 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLG 266 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEE
Confidence 5554443 36788998 577788887765 788
Q ss_pred EEEccC-CeeeeEEe---ecCceeEEEEccCCCEEEEEeC-----CCcEEEEECCCCeeeEEEeccccc---ceEEEEEc
Q 017314 199 VWDLHK-GYCVNTII---FHSNCNALAFSMDGQTIFSGHI-----DGNLRLWDIQTGKLLSEVAAHSLA---AVTSISLS 266 (373)
Q Consensus 199 vwd~~~-~~~~~~~~---~~~~~~~~~~~~~g~~l~sg~~-----dg~i~iwd~~~~~~~~~~~~~~~~---~v~~~~~~ 266 (373)
+||+.+ +....... ....+..++| |||++|+.++. +..|++||+.+++....+..+... .+.+++|+
T Consensus 267 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 267 VISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp EECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEEC
T ss_pred EEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEEC
Confidence 999988 76543221 1234788999 99999987654 567999999999877666554322 34688999
Q ss_pred CCCCEEEEeeCCCeEEEEEcc-ccceeeeeeecCCeeecCeeeeEECCCCcEEE-EEeCCC--cEEEEEccC-ceEEEEe
Q 017314 267 RSGNIILTSGRDNLHNLFDIR-SLEVCGSLRATGNRVASNWSRSCISPDESYVA-AGSADG--SVYIWSISK-ADIVRTL 341 (373)
Q Consensus 267 ~~~~~l~s~~~d~~i~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-sgs~Dg--~i~iwd~~~-~~~~~~l 341 (373)
|+|+++++++.|+..++|.+. ... ...+..+...+. ....++|+|++|+ +++.|+ .++||++.. +.....+
T Consensus 346 pdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~---~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l 421 (741)
T 2ecf_A 346 DDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVD---ELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRL 421 (741)
T ss_dssp TTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEE---EEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEEC
T ss_pred CCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEE---eEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeec
Confidence 999999999999988888765 223 344433322221 1225899998775 555666 899999875 5556667
Q ss_pred ccCCccEEEEEEcCCCCcEEEEeC
Q 017314 342 KEHTAPVLSCSWSGLGKPLASADK 365 (373)
Q Consensus 342 ~~h~~~V~~~~~s~~g~~l~s~s~ 365 (373)
.. ...+.+++|||||++|+....
T Consensus 422 ~~-~~~~~~~~~spdg~~l~~~~~ 444 (741)
T 2ecf_A 422 SK-APGMHSASFARNASVYVDSWS 444 (741)
T ss_dssp CC-SCSEEEEEECTTSSEEEEEEE
T ss_pred cc-CCCceEEEECCCCCEEEEEec
Confidence 65 567889999999998876644
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=7.3e-24 Score=190.99 Aligned_cols=263 Identities=10% Similarity=0.141 Sum_probs=181.1
Q ss_pred CCCcEEEEeCC--CCceee-eccccccceEEEEEcCCCCEEEEEeC---CCcEEEEEcCCCe--eEEEeecCCCcEEEEE
Q 017314 108 QDKSIKLWDTN--TGSLSS-TLYGCLGSVLDLAITHDNRSVIAASS---SNNLYVWDVNSGR--VRHTLTGHTDKVCAVD 179 (373)
Q Consensus 108 ~D~~v~iwd~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~s~---d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~ 179 (373)
.++.|.+|+++ +++... ....+...+..++|+|||+ |++++. ++.|++||+.+++ .+..+..+...+..++
T Consensus 14 ~~~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred CCCCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 45667777654 455432 2334456677899999999 666554 6899999998775 4445556777888899
Q ss_pred EeeCCCCEEEEEe-CCCcEEEEEccC-Ce--eeeEEeec----------CceeEEEEccCCCEEEEEeCCCcEEEEECC-
Q 017314 180 VSKISSRHVVSAA-YDRTLKVWDLHK-GY--CVNTIIFH----------SNCNALAFSMDGQTIFSGHIDGNLRLWDIQ- 244 (373)
Q Consensus 180 ~~~~~~~~~~s~s-~D~~i~vwd~~~-~~--~~~~~~~~----------~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~- 244 (373)
++| +++++++++ .+++|++||+.. +. .+..+... ..+.+++|+|+|+.++++..++.|++||+.
T Consensus 93 ~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 93 VDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred ECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 988 567777776 789999999963 32 22222221 136789999999966666678899999998
Q ss_pred CCeeeE--EEecccccceEEEEEcCCCCEEEE-eeCCCeEEEEEccc--cce--eeeeeecCCe--eecCeeeeEECCCC
Q 017314 245 TGKLLS--EVAAHSLAAVTSISLSRSGNIILT-SGRDNLHNLFDIRS--LEV--CGSLRATGNR--VASNWSRSCISPDE 315 (373)
Q Consensus 245 ~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~i~~~d~~~--~~~--~~~~~~~~~~--~~~~~~~~~~s~~~ 315 (373)
+++... .+..........++|+|+|+++++ +..++.+.+|++.. .+. ...+...... .......++++|||
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG 251 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG 251 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC
Confidence 554332 222333346788999999996655 56788999999874 322 1122111110 00112346799999
Q ss_pred cEE-EEEeCCCcEEEEEccC---ceEEEEeccCCccEEEEEEcCCCCcEEEEeCC-CeEEEc
Q 017314 316 SYV-AAGSADGSVYIWSISK---ADIVRTLKEHTAPVLSCSWSGLGKPLASADKN-GVVCVW 372 (373)
Q Consensus 316 ~~l-~sgs~Dg~i~iwd~~~---~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~d-g~i~iW 372 (373)
++| +++..++.|.+|++.. .+.+..+..+...+..++|+|||++|++++.+ +.|.+|
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~ 313 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLY 313 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEE
Confidence 987 5566789999999973 24566666666678899999999988888765 899998
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=5.5e-25 Score=217.00 Aligned_cols=266 Identities=13% Similarity=0.153 Sum_probs=192.6
Q ss_pred EEEEEcCCCCEEEEeeCCCcEEEEeCCCCcee-eeccccc-----------------cceEEEEEcCCCCEEEEEeCCCc
Q 017314 92 ASILFEYNSARLISGGQDKSIKLWDTNTGSLS-STLYGCL-----------------GSVLDLAITHDNRSVIAASSSNN 153 (373)
Q Consensus 92 ~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~-~~~~~~~-----------------~~v~~~~~~~~~~~l~s~s~d~~ 153 (373)
..+.|. |+.+++++.|+ | +||+.+++.. ..+..+. ..|.+++|+|| +.++.+ .+++
T Consensus 29 ~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~-~~~~ 102 (706)
T 2z3z_A 29 VGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF-TQGG 102 (706)
T ss_dssp TTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-ETTE
T ss_pred CCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-ECCE
Confidence 345676 67788888888 8 9999998773 4444433 46999999999 666655 4599
Q ss_pred EEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC-----CeeeeEEeecCc------------
Q 017314 154 LYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK-----GYCVNTIIFHSN------------ 216 (373)
Q Consensus 154 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~-----~~~~~~~~~~~~------------ 216 (373)
+++||+.+++... +..+...+..++|+| +++.++++ .|+.|++||+.+ +........+..
T Consensus 103 i~~~d~~~~~~~~-l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee 179 (706)
T 2z3z_A 103 LVGFDMLARKVTY-LFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQRE 179 (706)
T ss_dssp EEEEETTTTEEEE-EECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGC
T ss_pred EEEEECCCCceEE-ccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhh
Confidence 9999999887654 445677788889998 57778774 789999999988 765443322222
Q ss_pred ---eeEEEEccCCCEEEEEe---------------------------------CCCcEEEEECCCCeeeEEEec-ccccc
Q 017314 217 ---CNALAFSMDGQTIFSGH---------------------------------IDGNLRLWDIQTGKLLSEVAA-HSLAA 259 (373)
Q Consensus 217 ---~~~~~~~~~g~~l~sg~---------------------------------~dg~i~iwd~~~~~~~~~~~~-~~~~~ 259 (373)
+.+++|+|||++|++++ .+..|++||+.+++....... .....
T Consensus 180 ~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~ 259 (706)
T 2z3z_A 180 FGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKF 259 (706)
T ss_dssp TTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCE
T ss_pred cCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCcee
Confidence 37899999999999887 446799999999876543322 22356
Q ss_pred eEEEEEcCCCCEEEEeeCCC-----eEEEEEccccceeeeeee-cCCeeecCeeeeEECC--CCcEEEEEeCCCcEEEEE
Q 017314 260 VTSISLSRSGNIILTSGRDN-----LHNLFDIRSLEVCGSLRA-TGNRVASNWSRSCISP--DESYVAAGSADGSVYIWS 331 (373)
Q Consensus 260 v~~~~~~~~~~~l~s~~~d~-----~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~s~--~~~~l~sgs~Dg~i~iwd 331 (373)
+.+++|+|||+.|++++.++ .+.+||+.+.+....+.. ...........++|+| ||+++++++.||.++||.
T Consensus 260 ~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~ 339 (706)
T 2z3z_A 260 LTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYL 339 (706)
T ss_dssp EEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEE
T ss_pred EeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEE
Confidence 89999999999999887775 899999988733333321 1111110112357899 999999999999999999
Q ss_pred cc-CceEEEEeccCCccEEE-EEEcCCCCcEEEEeCC
Q 017314 332 IS-KADIVRTLKEHTAPVLS-CSWSGLGKPLASADKN 366 (373)
Q Consensus 332 ~~-~~~~~~~l~~h~~~V~~-~~~s~~g~~l~s~s~d 366 (373)
+. ++..+..+..|...|.+ ++|+|+|+.|+.++.+
T Consensus 340 ~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 340 YDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp EETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred EECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 87 67778888888888887 7999999988666554
No 144
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=4e-25 Score=226.93 Aligned_cols=278 Identities=12% Similarity=0.116 Sum_probs=216.7
Q ss_pred EEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCC-CceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 017314 82 HKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNT-GSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 160 (373)
..+.+|.+.+.++.|+++ ..+++++.|++++||.+.. +.....+..|. .+...+|+|||+.++++ .++.|++||+.
T Consensus 197 ~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~ 273 (1045)
T 1k32_A 197 KKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPD 273 (1045)
T ss_dssp EEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTT
T ss_pred EECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCC
Confidence 455789999999999988 6777888899999998753 33444454444 35667999999988887 58999999995
Q ss_pred CCeeEEEeec-----------CCCcEEEEEEe-eCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCC
Q 017314 161 SGRVRHTLTG-----------HTDKVCAVDVS-KISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQ 227 (373)
Q Consensus 161 ~~~~~~~~~~-----------h~~~v~~~~~~-~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~ 227 (373)
..+.. .+.+ |...+..++|+ | ++..+++++ ++.+.+|++..+.......... .+..++|+ ||+
T Consensus 274 ~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~ 349 (1045)
T 1k32_A 274 TEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKV 349 (1045)
T ss_dssp TCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEE
T ss_pred ceEee-eeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCC
Confidence 54433 5554 34568899999 7 566777777 8899999998776543222223 57789999 999
Q ss_pred EEEEEeCCCcEE-EEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCe
Q 017314 228 TIFSGHIDGNLR-LWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNW 306 (373)
Q Consensus 228 ~l~sg~~dg~i~-iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 306 (373)
.|+.++.++.+. +||+.+++.. .+..+ ...+..++|+|+|++|++++.++.+++||+.+.+.......+...+
T Consensus 350 ~l~~~s~~~~l~~~~d~~~~~~~-~l~~~-~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v---- 423 (1045)
T 1k32_A 350 AFIHGTREGDFLGIYDYRTGKAE-KFEEN-LGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMI---- 423 (1045)
T ss_dssp EEEEEETTEEEEEEEETTTCCEE-ECCCC-CCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCC----
T ss_pred eEEEEECCCceEEEEECCCCCce-EecCC-ccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCc----
Confidence 999988888888 9999877643 34444 3689999999999999999999999999999877655543433332
Q ss_pred eeeEECCCCcEEEEEeCCC----------cEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 307 SRSCISPDESYVAAGSADG----------SVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 307 ~~~~~s~~~~~l~sgs~Dg----------~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
...+|+|||++|++++.++ .|++||+.+++ ...+..|...+.+++|+|||++|++++.++...+|+
T Consensus 424 ~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 424 TDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp CCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred cceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcc
Confidence 2367999999999887654 89999999887 677888888899999999999999999887766663
No 145
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=5.9e-25 Score=217.31 Aligned_cols=279 Identities=11% Similarity=-0.021 Sum_probs=197.2
Q ss_pred ceEEecCccC---cEEEEEEcCCCCEEEEeeCC---------CcEEEEeCCCCce--eeeccccccceEEEEEcCCCCEE
Q 017314 80 CKHKINAHEG---GCASILFEYNSARLISGGQD---------KSIKLWDTNTGSL--SSTLYGCLGSVLDLAITHDNRSV 145 (373)
Q Consensus 80 ~~~~~~~h~~---~v~~~~~~~~~~~l~s~s~D---------~~v~iwd~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l 145 (373)
+...+.+|.. .|.+++|||||++|++++.| +.|.+||+.+++. +....+|...+..++|+|||+.|
T Consensus 49 ~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~l 128 (723)
T 1xfd_A 49 STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQL 128 (723)
T ss_dssp CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCE
T ss_pred EEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEE
Confidence 3455666654 49999999999999999875 7788999998875 22233444558889999999999
Q ss_pred EEEeCCCcEEEEEcCCCeeEEEeecCCCcE------------------EEEEEeeCCCCEEEEEeCCC------------
Q 017314 146 IAASSSNNLYVWDVNSGRVRHTLTGHTDKV------------------CAVDVSKISSRHVVSAAYDR------------ 195 (373)
Q Consensus 146 ~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v------------------~~~~~~~~~~~~~~s~s~D~------------ 195 (373)
++++. +.|++||+.+++.......+...+ .++.|+| +++.|++++.|+
T Consensus 129 a~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~ 206 (723)
T 1xfd_A 129 IFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYT 206 (723)
T ss_dssp EEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCS
T ss_pred EEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccC
Confidence 98886 799999999988776666554433 6899998 677888877553
Q ss_pred ----------------------cEEEEEccCCeeeeEEeec-------CceeEEEEccCCCEEEEEeC----CCcEEEEE
Q 017314 196 ----------------------TLKVWDLHKGYCVNTIIFH-------SNCNALAFSMDGQTIFSGHI----DGNLRLWD 242 (373)
Q Consensus 196 ----------------------~i~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~g~~l~sg~~----dg~i~iwd 242 (373)
+|++||+.++.....+..+ ..+..++|+|||++|++.+. +..|++||
T Consensus 207 ~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 286 (723)
T 1xfd_A 207 GSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCD 286 (723)
T ss_dssp SSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEE
T ss_pred CcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEe
Confidence 7999999888754444432 24678999999998877653 35799999
Q ss_pred CCCCeeeEEEecccccce----EEEEEcCCCCEEEE--eeCCC------eEEEEEc-cccce--eeeeeecCCeeecCee
Q 017314 243 IQTGKLLSEVAAHSLAAV----TSISLSRSGNIILT--SGRDN------LHNLFDI-RSLEV--CGSLRATGNRVASNWS 307 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~v----~~~~~~~~~~~l~s--~~~d~------~i~~~d~-~~~~~--~~~~~~~~~~~~~~~~ 307 (373)
+.+++....+..+....+ ..+.|+|+|+.|+. +..++ .+.+||+ ..... ...+......+ ..
T Consensus 287 ~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~---~~ 363 (723)
T 1xfd_A 287 ATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDV---TK 363 (723)
T ss_dssp TTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCE---EE
T ss_pred CCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEE---Ee
Confidence 999887665544332333 37899999997664 45666 4556662 33220 23332211111 11
Q ss_pred eeEECCCCcEEEEEeCC---CcEEEEEccCce--EEEEecc---CCccEEEEEEcCCCCcEEEE
Q 017314 308 RSCISPDESYVAAGSAD---GSVYIWSISKAD--IVRTLKE---HTAPVLSCSWSGLGKPLASA 363 (373)
Q Consensus 308 ~~~~s~~~~~l~sgs~D---g~i~iwd~~~~~--~~~~l~~---h~~~V~~~~~s~~g~~l~s~ 363 (373)
..+++|||++|+..+.+ +.++||++.... ....+.. |...+..++|||||++|+..
T Consensus 364 ~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~ 427 (723)
T 1xfd_A 364 ILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLK 427 (723)
T ss_dssp EEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEE
T ss_pred eeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEE
Confidence 24789999999766554 889999986432 3334543 67778999999999988764
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.94 E-value=4.5e-24 Score=191.92 Aligned_cols=260 Identities=10% Similarity=0.134 Sum_probs=188.3
Q ss_pred EEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccc-cceEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCeeEEEeecC
Q 017314 94 ILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCL-GSVLDLAITHDNRSVI-AASSSNNLYVWDVNSGRVRHTLTGH 171 (373)
Q Consensus 94 ~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~h 171 (373)
+++++++..+++++.|++|++||+.+++....+..+. ..+..++|+|+++.++ +...++.|.+||+.+++....+..+
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 4577888899999999999999999998877765443 2577899999998665 4556889999999999887777643
Q ss_pred C------CcEEEEEEeeCCCCEEEEEeCC------------CcEEEEEccCCe---eeeEEeecCceeEEEEccCCCEEE
Q 017314 172 T------DKVCAVDVSKISSRHVVSAAYD------------RTLKVWDLHKGY---CVNTIIFHSNCNALAFSMDGQTIF 230 (373)
Q Consensus 172 ~------~~v~~~~~~~~~~~~~~s~s~D------------~~i~vwd~~~~~---~~~~~~~~~~~~~~~~~~~g~~l~ 230 (373)
. ..+..+.++| +++++++++.+ +.|.+||+.++. .+.....+..+.+++|+|+|+ ++
T Consensus 85 ~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EE
T ss_pred cccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EE
Confidence 2 2367788887 57788877755 899999998743 334444555678899999999 66
Q ss_pred EEeCCCcEEEEECCCCeeeEEEecccc-----------------------cceEEEEEcCCCCE-----------EEEee
Q 017314 231 SGHIDGNLRLWDIQTGKLLSEVAAHSL-----------------------AAVTSISLSRSGNI-----------ILTSG 276 (373)
Q Consensus 231 sg~~dg~i~iwd~~~~~~~~~~~~~~~-----------------------~~v~~~~~~~~~~~-----------l~s~~ 276 (373)
+++. .|.+||+.+++.+..+..+.. .....+++++++.. +....
T Consensus 163 ~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 240 (349)
T 1jmx_B 163 VAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDL 240 (349)
T ss_dssp EESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEET
T ss_pred EccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEec
Confidence 6543 499999999988776654320 03445666655421 11223
Q ss_pred CCCeEEEEEccccceeeeeeecCCeeecCeeeeEECC-CCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcC
Q 017314 277 RDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISP-DESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSG 355 (373)
Q Consensus 277 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~ 355 (373)
.++.++++++.. . .......+++| +|++++++ ++.|++||+.+++.+..+..+ ..+.+++|+|
T Consensus 241 ~~~~~~~~~~~~---------~----~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~ 304 (349)
T 1jmx_B 241 KTGKTHTQEFAD---------L----TELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDK 304 (349)
T ss_dssp TTCCEEEEEEEE---------C----SSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECS
T ss_pred cCCcEEeccccc---------C----CCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCC-CCccceEECC
Confidence 334444444321 1 11223467899 99999988 889999999999988877643 3467999999
Q ss_pred CCCcEEEEeCCCeEEEcC
Q 017314 356 LGKPLASADKNGVVCVWT 373 (373)
Q Consensus 356 ~g~~l~s~s~dg~i~iW~ 373 (373)
+|++|++++.++.|++|+
T Consensus 305 dg~~l~~~~~~~~v~v~d 322 (349)
T 1jmx_B 305 KGDKLYLGGTFNDLAVFN 322 (349)
T ss_dssp SSSCEEEESBSSEEEEEE
T ss_pred CCCEEEEecCCCeEEEEe
Confidence 999999898999999995
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=2.1e-23 Score=186.54 Aligned_cols=271 Identities=11% Similarity=0.090 Sum_probs=190.7
Q ss_pred eEEecCccCcEEEEEEcCCCCEEEEeeC-CCcEEEEeCCCCce-eeeccccccceEEEEEcCCCCEEEEEeCCC---cEE
Q 017314 81 KHKINAHEGGCASILFEYNSARLISGGQ-DKSIKLWDTNTGSL-SSTLYGCLGSVLDLAITHDNRSVIAASSSN---NLY 155 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~-D~~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~---~i~ 155 (373)
...+..+...+ .++|+|++++|++++. ++.|.+||+.+++. ...+..+..+..+++|+|++++++++..++ .|+
T Consensus 33 ~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~ 111 (331)
T 3u4y_A 33 LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQ 111 (331)
T ss_dssp EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEE
T ss_pred eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEE
Confidence 34444555666 9999999997766665 89999999999887 666666666666699999999999555442 899
Q ss_pred EEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCc-EEEEEccCCeee-----eEEeecCceeEEEEccCCCEE
Q 017314 156 VWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRT-LKVWDLHKGYCV-----NTIIFHSNCNALAFSMDGQTI 229 (373)
Q Consensus 156 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~-i~vwd~~~~~~~-----~~~~~~~~~~~~~~~~~g~~l 229 (373)
+||+.+++.+..+..+. ...+++|+|.....++++..++. |.+|++.....+ ..+........++|+|+|+++
T Consensus 112 v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 112 SYSFLKNKFISTIPIPY-DAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFA 190 (331)
T ss_dssp EEETTTTEEEEEEECCT-TEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEE
T ss_pred EEECCCCCeEEEEECCC-CccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEE
Confidence 99999999888877544 45889999854445666677788 999998754322 122223457889999999976
Q ss_pred EE-EeCCCcEEEEECCCCee---eEEEecccccceEEEEEcCCCCEEEEe-eCCCeEEEEEccccce--eeeeeec----
Q 017314 230 FS-GHIDGNLRLWDIQTGKL---LSEVAAHSLAAVTSISLSRSGNIILTS-GRDNLHNLFDIRSLEV--CGSLRAT---- 298 (373)
Q Consensus 230 ~s-g~~dg~i~iwd~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~i~~~d~~~~~~--~~~~~~~---- 298 (373)
+. +..++.|++||+.+++. +..+..+ ..+..++|+|+|++++.+ ..++.+.+||+.+.+. +..+...
T Consensus 191 ~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 268 (331)
T 3u4y_A 191 FVANLIGNSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLID 268 (331)
T ss_dssp EEEETTTTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCC
T ss_pred EEEeCCCCeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccC
Confidence 55 45689999999999887 6666644 567889999999976655 4578899999987765 3332221
Q ss_pred CCeeecCeeeeEECCCCcEEEEE-eCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCC
Q 017314 299 GNRVASNWSRSCISPDESYVAAG-SADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLG 357 (373)
Q Consensus 299 ~~~~~~~~~~~~~s~~~~~l~sg-s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g 357 (373)
.... .....++++|||++|+++ ..++.|++||+..... ..+.+....-....++|++
T Consensus 269 ~~~~-~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~-~~~~~~~~~g~~~~~~~~~ 326 (331)
T 3u4y_A 269 PRPL-FGANQMALNKTETKLFISANISRELKVFTISGKVV-GYVAGIEANGGIAICHPDK 326 (331)
T ss_dssp CGGG-TTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE-EECTTCCCBSCEEECCCC-
T ss_pred CCCc-ccccceEECCCCCEEEEecCCCCcEEEEEecCCcc-cceecccccCCeEEECCcc
Confidence 1111 111235899999988655 4567999999987543 3343333222234455554
No 148
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=1.1e-23 Score=188.83 Aligned_cols=264 Identities=13% Similarity=0.191 Sum_probs=184.2
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCC-CcEEEEeCC--CCce--eeeccccccceEEEEEcCCCCEEEEEeC-CCcEEEEEc
Q 017314 86 AHEGGCASILFEYNSARLISGGQD-KSIKLWDTN--TGSL--SSTLYGCLGSVLDLAITHDNRSVIAASS-SNNLYVWDV 159 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D-~~v~iwd~~--~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~s~-d~~i~iwd~ 159 (373)
.|...+.+++|+|++++|++++.+ +.|++|++. ++.. +..+..+ ..+..++|+|+++++++++. ++.|++||+
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~ 113 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRL 113 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEEC
Confidence 467788899999999999998887 999999997 5543 3334333 37889999999998877765 788999999
Q ss_pred C---CCeeEEEeecCCCcEEEEEEeeCCCCEEEEEe-CCCcEEEEEccC-Ceeee----EEee--cCceeEEEEccCCCE
Q 017314 160 N---SGRVRHTLTGHTDKVCAVDVSKISSRHVVSAA-YDRTLKVWDLHK-GYCVN----TIIF--HSNCNALAFSMDGQT 228 (373)
Q Consensus 160 ~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s-~D~~i~vwd~~~-~~~~~----~~~~--~~~~~~~~~~~~g~~ 228 (373)
. +.+....+..+ ..+.+++|+| +++++++++ .|+.|++||+.+ +.... .... ...+..++|+|+|++
T Consensus 114 ~~~~~~~~~~~~~~~-~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 114 EDGLPVGVVDVVEGL-DGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQY 191 (343)
T ss_dssp ETTEEEEEEEEECCC-TTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSE
T ss_pred CCCccccccccccCC-CCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCE
Confidence 4 44455555544 3577888988 466666666 899999999987 54332 1222 235778999999997
Q ss_pred EEEE-eCCCcEEEEECCC--Cee--eEEEeccc-----ccceEEEEEcCCCCEEE-EeeCCCeEEEEEcc----ccceee
Q 017314 229 IFSG-HIDGNLRLWDIQT--GKL--LSEVAAHS-----LAAVTSISLSRSGNIIL-TSGRDNLHNLFDIR----SLEVCG 293 (373)
Q Consensus 229 l~sg-~~dg~i~iwd~~~--~~~--~~~~~~~~-----~~~v~~~~~~~~~~~l~-s~~~d~~i~~~d~~----~~~~~~ 293 (373)
++++ ..++.|++||+.. ++. ...+.... ...+..++|+|++++|+ ++..++.+.+||+. ..+...
T Consensus 192 l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~ 271 (343)
T 1ri6_A 192 AYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEG 271 (343)
T ss_dssp EEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEE
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEee
Confidence 7655 4889999999953 433 22222111 13566899999999777 45578999999998 233333
Q ss_pred eeeecCCeeecCeeeeEECCCCcEEEEEe-CCCcEEEEEcc--CceE--EEEeccCCccEEEEEEcCCCC
Q 017314 294 SLRATGNRVASNWSRSCISPDESYVAAGS-ADGSVYIWSIS--KADI--VRTLKEHTAPVLSCSWSGLGK 358 (373)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~s~~~~~l~sgs-~Dg~i~iwd~~--~~~~--~~~l~~h~~~V~~~~~s~~g~ 358 (373)
.+..... ...++++|+|++|++++ .|+.|.+|++. +++. +..+... ....+++|.|+.+
T Consensus 272 ~~~~~~~-----~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 272 FQPTETQ-----PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHEG 335 (343)
T ss_dssp EEECSSS-----CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC-
T ss_pred eecCCCc-----cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEcccC
Confidence 3333222 23467999999888877 68999999654 5533 4444433 3346788877643
No 149
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.93 E-value=1.1e-23 Score=192.64 Aligned_cols=290 Identities=15% Similarity=0.131 Sum_probs=202.8
Q ss_pred ceEEecCccCcEEE-----EEEcCCCCEEEEeeC-CCc--EEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCC
Q 017314 80 CKHKINAHEGGCAS-----ILFEYNSARLISGGQ-DKS--IKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSS 151 (373)
Q Consensus 80 ~~~~~~~h~~~v~~-----~~~~~~~~~l~s~s~-D~~--v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d 151 (373)
....+..|...... .+|+|||++|+.++. ++. |.+||+.+++......++...+..++|+||++.|+.++.+
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~ 101 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDG 101 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETT
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCC
Confidence 44566777766666 789999999999887 664 8888999988877776666666667899999999999999
Q ss_pred CcEEEEEcCCCeeEEEeecCCCcEEEEEE--eeCCCCEEEEE----------------------eCCCcEEEEEccCCee
Q 017314 152 NNLYVWDVNSGRVRHTLTGHTDKVCAVDV--SKISSRHVVSA----------------------AYDRTLKVWDLHKGYC 207 (373)
Q Consensus 152 ~~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~~~s~----------------------s~D~~i~vwd~~~~~~ 207 (373)
+.+++||+.+++....+..+...+....+ ++ ++..++.. +.+..|.+||+.++..
T Consensus 102 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (388)
T 3pe7_A 102 RNLMRVDLATLEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGES 180 (388)
T ss_dssp TEEEEEETTTCCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCE
T ss_pred CeEEEEECCCCcceeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCce
Confidence 99999999999887777766665544333 44 55666532 2457899999998876
Q ss_pred eeEEeecCceeEEEEcc-CCCEEEEEeCC------CcEEEEECCCCeeeEEEecccc-cceEEEEEcCCCCEEEEeeC--
Q 017314 208 VNTIIFHSNCNALAFSM-DGQTIFSGHID------GNLRLWDIQTGKLLSEVAAHSL-AAVTSISLSRSGNIILTSGR-- 277 (373)
Q Consensus 208 ~~~~~~~~~~~~~~~~~-~g~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~-- 277 (373)
.........+..++|+| ||+.|+..+.+ ..|.++|+..+.. ..+..+.. ..+....|+|+|+.|+..+.
T Consensus 181 ~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~ 259 (388)
T 3pe7_A 181 TVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPDGSALVYVSYLK 259 (388)
T ss_dssp EEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTTSSCEEEEEEET
T ss_pred EEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCCCCEEEEEecCC
Confidence 55444455688999999 99988876653 3788888766543 33433332 35778899999997755433
Q ss_pred CC---eEEEEEccccceeeeeeecCC-eeecCeeeeEECCCCcEEEEE---------eCCCcEEEEEccCceEEEEeccC
Q 017314 278 DN---LHNLFDIRSLEVCGSLRATGN-RVASNWSRSCISPDESYVAAG---------SADGSVYIWSISKADIVRTLKEH 344 (373)
Q Consensus 278 d~---~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~~~l~sg---------s~Dg~i~iwd~~~~~~~~~l~~h 344 (373)
+. .+.+||+.+.+.......... ..........++|||++|+.. ..+..|++||+.+++. ..+..|
T Consensus 260 ~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~ 338 (388)
T 3pe7_A 260 GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARH 338 (388)
T ss_dssp TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEEC
T ss_pred CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccc
Confidence 22 399999987764221111110 000001113589999988753 4567899999998765 445555
Q ss_pred Cc-----------cEEEEEEcCCCCcEEEEe-CCCeEEEc
Q 017314 345 TA-----------PVLSCSWSGLGKPLASAD-KNGVVCVW 372 (373)
Q Consensus 345 ~~-----------~V~~~~~s~~g~~l~s~s-~dg~i~iW 372 (373)
.. .+.+++|||||++|+.++ .+|...||
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 339 DTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALY 378 (388)
T ss_dssp CCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred cCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEE
Confidence 55 578899999999887665 47777776
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=1.9e-23 Score=186.82 Aligned_cols=245 Identities=15% Similarity=0.143 Sum_probs=185.9
Q ss_pred cEEEEEEcCCCCEE-EEeeCCCcEEEEeCCCCceeeecccc-----ccceEEEEEcCCCCEEEEEe------------CC
Q 017314 90 GCASILFEYNSARL-ISGGQDKSIKLWDTNTGSLSSTLYGC-----LGSVLDLAITHDNRSVIAAS------------SS 151 (373)
Q Consensus 90 ~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s~s------------~d 151 (373)
.+..++|+|+++.+ ++++.++.|.+||+.+++....+... ...+..++|+|+++++++++ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 47789999999865 55667899999999998877655421 22567899999999988886 57
Q ss_pred CcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEE
Q 017314 152 NNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFS 231 (373)
Q Consensus 152 ~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s 231 (373)
+.|.+||+.+++....+.. ...+..+.++| ++++++++ ++.|.+||+.++.....+..+.....+.|+|+|..++.
T Consensus 115 ~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 190 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEA-PRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWN 190 (337)
T ss_dssp CEEEEEETTTTEEEEEEEC-CSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeC-CCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEee
Confidence 9999999999988877765 34567788887 45666666 68999999999987766654432223478999887765
Q ss_pred EeCC-C-----------------------cEEEEECCCCeeeE-EEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEc
Q 017314 232 GHID-G-----------------------NLRLWDIQTGKLLS-EVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDI 286 (373)
Q Consensus 232 g~~d-g-----------------------~i~iwd~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~ 286 (373)
.+.+ + .|.+||+.+++... .+..+. ..+.+++|+|++++++++ ++.+.+||+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~--~~~v~~~d~ 267 (337)
T 1pby_B 191 QHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMD-VFYFSTAVNPAKTRAFGA--YNVLESFDL 267 (337)
T ss_dssp CCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECS-SCEEEEEECTTSSEEEEE--ESEEEEEET
T ss_pred eccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCC-CceeeEEECCCCCEEEEe--CCeEEEEEC
Confidence 4432 2 46899999987652 122222 467889999999999888 789999999
Q ss_pred cccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCc
Q 017314 287 RSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTA 346 (373)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~ 346 (373)
.+.+....+..... ...++++|+|++|++++.++.|++||+.+++.+..+..+.+
T Consensus 268 ~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~~ 322 (337)
T 1pby_B 268 EKNASIKRVPLPHS-----YYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPGN 322 (337)
T ss_dssp TTTEEEEEEECSSC-----CCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGGG
T ss_pred CCCcCcceecCCCc-----eeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCCC
Confidence 98877666543322 23467999999999999999999999999998888765543
No 151
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=1.1e-22 Score=183.30 Aligned_cols=239 Identities=11% Similarity=0.133 Sum_probs=186.4
Q ss_pred cceEEEEEcCCCCEEEEEeC-------CCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEcc
Q 017314 131 GSVLDLAITHDNRSVIAASS-------SNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLH 203 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~-------d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~ 203 (373)
..+..++|+|+++++++++. ++.|.+||..+++....+... ..+..+.+++.....+++...++.|.+||..
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND-LKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES-SCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC-CCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 45778999999999888774 568999999999988877643 3466788888444355666778999999999
Q ss_pred CCeeeeEEeecC----------ceeEEEEccCCCEEEEEe--CCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCE
Q 017314 204 KGYCVNTIIFHS----------NCNALAFSMDGQTIFSGH--IDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNI 271 (373)
Q Consensus 204 ~~~~~~~~~~~~----------~~~~~~~~~~g~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 271 (373)
+++.+..+..+. .+..++|+|+|+++++++ .++.|.+||+.+++.+..+..+. ..+..++|+|++++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~s~dg~~ 198 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG-KMSTGLALDSEGKR 198 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCC-TTCCCCEEETTTTE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCC-CccceEEECCCCCE
Confidence 998877776543 257899999999888766 47889999999999888776333 45788999999999
Q ss_pred EEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEe-CCCcEEEEEccCceEEEEeccCCccEEE
Q 017314 272 ILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGS-ADGSVYIWSISKADIVRTLKEHTAPVLS 350 (373)
Q Consensus 272 l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs-~Dg~i~iwd~~~~~~~~~l~~h~~~V~~ 350 (373)
+++++.++.+.+||+.+.+....+.............++++|+|++++.++ .++.|++||+.+++.+..+..+.. ..
T Consensus 199 l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~ 276 (353)
T 3vgz_A 199 LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LA 276 (353)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CC
T ss_pred EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ce
Confidence 999999999999999988877666542221122233467999999776665 459999999999998887765442 57
Q ss_pred EEEcCCCCcEEEE-eCCCeEEEcC
Q 017314 351 CSWSGLGKPLASA-DKNGVVCVWT 373 (373)
Q Consensus 351 ~~~s~~g~~l~s~-s~dg~i~iW~ 373 (373)
++|+|+|++++.+ ..++.|.+|+
T Consensus 277 ~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 277 VLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEECCCCCEEEEEECCCCeEEEEE
Confidence 9999999966554 4789999985
No 152
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.92 E-value=1e-22 Score=189.05 Aligned_cols=200 Identities=12% Similarity=0.103 Sum_probs=156.3
Q ss_pred cCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC-----------ceee----eccccccceEEEEEcCCCCEEE----EE
Q 017314 88 EGGCASILFEYNSARLISGGQDKSIKLWDTNTG-----------SLSS----TLYGCLGSVLDLAITHDNRSVI----AA 148 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~-----------~~~~----~~~~~~~~v~~~~~~~~~~~l~----s~ 148 (373)
...+..+++++++.++++|+.|+ |++|+.... .... ....+.+.|.+++|+|++++|+ ++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 34578899999999999999998 899875311 0000 0112456799999999999999 78
Q ss_pred eCCCcEEEEEcCCC--------e---eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEee-cCc
Q 017314 149 SSSNNLYVWDVNSG--------R---VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF-HSN 216 (373)
Q Consensus 149 s~d~~i~iwd~~~~--------~---~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~-~~~ 216 (373)
+.|++|+|||+.++ + ....+.+|...|.+++|+|..+.++++++.||+|++||++++........ ...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 88999999998764 1 24567789999999999996688999999999999999998866544444 346
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEeccc------ccceEEEEEcCCCCEEEEee-CCC------eEEE
Q 017314 217 CNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHS------LAAVTSISLSRSGNIILTSG-RDN------LHNL 283 (373)
Q Consensus 217 ~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~~-~d~------~i~~ 283 (373)
+.+++|+|+|++|++|+.||+|++||++ ++....+..+. ...+.+++|++++.++++.+ .|+ .+++
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i 273 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVM 273 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEE
Confidence 9999999999999999999999999998 55555554432 13799999999888876543 332 3889
Q ss_pred EEcccc
Q 017314 284 FDIRSL 289 (373)
Q Consensus 284 ~d~~~~ 289 (373)
|++++.
T Consensus 274 ~~l~~~ 279 (434)
T 2oit_A 274 ALLPKK 279 (434)
T ss_dssp EECCCT
T ss_pred EEeccC
Confidence 999864
No 153
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=5.8e-23 Score=179.78 Aligned_cols=234 Identities=13% Similarity=0.079 Sum_probs=171.8
Q ss_pred EecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCC-Cceeeecccc-ccceEEEEEcCCCCEEEEEeC--CCcEEEE-
Q 017314 83 KINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNT-GSLSSTLYGC-LGSVLDLAITHDNRSVIAASS--SNNLYVW- 157 (373)
Q Consensus 83 ~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~s~--d~~i~iw- 157 (373)
.+..|.+.|.+++|+|++++|++++ ++.|++||+.+ ++......++ ...+.+++|+|++++|++++. ++..+||
T Consensus 36 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~ 114 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYL 114 (297)
T ss_dssp EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEE
T ss_pred eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEE
Confidence 4556889999999999999999987 88999999998 8776666555 367889999999999999983 3455555
Q ss_pred -EcCCCeeEEEeecCCCcEEEEEEeeCCCCEEE-EEeCCCcEEEEEcc--CCeeeeEEeecCceeEEEEccCCCEEEEEe
Q 017314 158 -DVNSGRVRHTLTGHTDKVCAVDVSKISSRHVV-SAAYDRTLKVWDLH--KGYCVNTIIFHSNCNALAFSMDGQTIFSGH 233 (373)
Q Consensus 158 -d~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~-s~s~D~~i~vwd~~--~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~ 233 (373)
++.+++ ...+..+. .+..+.|+|. ++.++ +++.|+.+++|++. ++...........+.+++|+|+|++|+.++
T Consensus 115 ~~~~~~~-~~~~~~~~-~~~~~~~spd-g~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 115 LPSTGGT-PRLMTKNL-PSYWHGWSPD-GKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EETTCCC-CEECCSSS-SEEEEEECTT-SSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred EECCCCc-eEEeecCC-CccceEECCC-CCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEe
Confidence 445554 33444343 4888899884 55554 88899999999964 333322222334588999999999888665
Q ss_pred -CCCcEEEEECC-CCeeeEEEecccccceEEEEEcCCCCEEEEeeCC-----------CeEEEEEccccceeee--eeec
Q 017314 234 -IDGNLRLWDIQ-TGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRD-----------NLHNLFDIRSLEVCGS--LRAT 298 (373)
Q Consensus 234 -~dg~i~iwd~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----------~~i~~~d~~~~~~~~~--~~~~ 298 (373)
.|+.+++|++. .+..+..+..+. ..+.++.|+|++++|+.++.+ ..+.+||+.+.+.... +..+
T Consensus 192 ~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 270 (297)
T 2ojh_A 192 SRTGQMQIWRVRVDGSSVERITDSA-YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG 270 (297)
T ss_dssp CTTSSCEEEEEETTSSCEEECCCCS-EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES
T ss_pred cCCCCccEEEECCCCCCcEEEecCC-cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCC
Confidence 59999999986 455566666654 678999999999999888765 5699999987654322 2222
Q ss_pred CCeeecCeeeeEECCCCcEEEEEeCCC
Q 017314 299 GNRVASNWSRSCISPDESYVAAGSADG 325 (373)
Q Consensus 299 ~~~~~~~~~~~~~s~~~~~l~sgs~Dg 325 (373)
... ...++++|+|++|++++.|.
T Consensus 271 ~~~----~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 271 QGT----MNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTT----SCSCCBCTTSSEEEEEEECC
T ss_pred Ccc----cccceECCCCCEEEEEEecc
Confidence 222 22357899999999887654
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=1.2e-21 Score=177.58 Aligned_cols=261 Identities=13% Similarity=0.159 Sum_probs=175.6
Q ss_pred eCCCcEEEEeC--CCCceeeeccccccceEEEEEcCCCCEEEEEeCC----CcEEEEEcCC--Cee--EEEeecCCCcEE
Q 017314 107 GQDKSIKLWDT--NTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSS----NNLYVWDVNS--GRV--RHTLTGHTDKVC 176 (373)
Q Consensus 107 s~D~~v~iwd~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d----~~i~iwd~~~--~~~--~~~~~~h~~~v~ 176 (373)
+.++.|.+|++ .+++.......+...+..++|+||+++|++++.+ +.|.+|++.. ++. +.....+.....
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred CCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 34678999866 4554432222256677789999999999999886 7999998865 443 334444555666
Q ss_pred EEEEeeCCCCEEEEEe-CCCcEEEEEccCCeeeeEE----eec-----------CceeEEEEccCCCEEEEEe-CCCcEE
Q 017314 177 AVDVSKISSRHVVSAA-YDRTLKVWDLHKGYCVNTI----IFH-----------SNCNALAFSMDGQTIFSGH-IDGNLR 239 (373)
Q Consensus 177 ~~~~~~~~~~~~~s~s-~D~~i~vwd~~~~~~~~~~----~~~-----------~~~~~~~~~~~g~~l~sg~-~dg~i~ 239 (373)
.+++ +++++++++ .+++|.+|++.....+... ... ..+.+++|+|+|+++++++ .++.|+
T Consensus 104 ~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~ 180 (361)
T 3scy_A 104 YLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIH 180 (361)
T ss_dssp EEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEE
Confidence 6666 456666555 6899999999754322111 110 1246799999999776555 588999
Q ss_pred EEECCCCee------e------EEEecccccceEEEEEcCCCCEEEEee-CCCeEEEEEccccce--eeeeeecCCeeec
Q 017314 240 LWDIQTGKL------L------SEVAAHSLAAVTSISLSRSGNIILTSG-RDNLHNLFDIRSLEV--CGSLRATGNRVAS 304 (373)
Q Consensus 240 iwd~~~~~~------~------~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~~d~~~~~~--~~~~~~~~~~~~~ 304 (373)
+|++..... + .............++|+|+|+++++++ .++.+.+||+.+... ...+...... ..
T Consensus 181 v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~-~~ 259 (361)
T 3scy_A 181 KFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVN-AQ 259 (361)
T ss_dssp EEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSC-CC
T ss_pred EEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCC-CC
Confidence 999875431 1 122222235678999999999887776 689999999885533 2222211110 01
Q ss_pred CeeeeEECCCCcEEEEEeC--CCcEEEEEcc--Cce--EEEEeccCCccEEEEEEcCCCCcEEEEe-CCCeEEEc
Q 017314 305 NWSRSCISPDESYVAAGSA--DGSVYIWSIS--KAD--IVRTLKEHTAPVLSCSWSGLGKPLASAD-KNGVVCVW 372 (373)
Q Consensus 305 ~~~~~~~s~~~~~l~sgs~--Dg~i~iwd~~--~~~--~~~~l~~h~~~V~~~~~s~~g~~l~s~s-~dg~i~iW 372 (373)
....++++|||++|+++.. ++.|.+|++. +++ .+..+.. ...+.+++|+|||++|++++ .++.|.+|
T Consensus 260 ~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~ 333 (361)
T 3scy_A 260 GSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIF 333 (361)
T ss_dssp CEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEE
T ss_pred CcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEE
Confidence 1235679999999866554 5899999995 344 3444444 45678999999999888887 67899986
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.91 E-value=7.3e-22 Score=177.87 Aligned_cols=247 Identities=16% Similarity=0.236 Sum_probs=171.3
Q ss_pred CccCcEEEEEEcCCCCEEEEeeC---CCcEEEEeCCCCc--eeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEc
Q 017314 86 AHEGGCASILFEYNSARLISGGQ---DKSIKLWDTNTGS--LSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDV 159 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~---D~~v~iwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~ 159 (373)
.+......++|+|||+ |++++. ++.|++||+.++. .+..+..+...+..++|+||+++|++++ .+++|++||+
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 4556677899999999 665554 6899999997765 3444445667788999999999998888 6789999999
Q ss_pred C-CCe--eEEEeec---------CCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEcc-CCeeeeE--Eee--cCceeEEEE
Q 017314 160 N-SGR--VRHTLTG---------HTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLH-KGYCVNT--IIF--HSNCNALAF 222 (373)
Q Consensus 160 ~-~~~--~~~~~~~---------h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~-~~~~~~~--~~~--~~~~~~~~~ 222 (373)
. ++. .+..+.. +...+.+++++|. ++.+++...++.|++||+. .+..... +.. ...+..++|
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spd-g~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~ 194 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPD-NRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVF 194 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTT-SCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEE
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCC-CcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEE
Confidence 6 332 3333322 1234788999984 5577777789999999998 4543221 222 224678999
Q ss_pred ccCCCEEEE-EeCCCcEEEEECCC--Cee--eEEEecccc-----cceEEEEEcCCCCEE-EEeeCCCeEEEEEccc---
Q 017314 223 SMDGQTIFS-GHIDGNLRLWDIQT--GKL--LSEVAAHSL-----AAVTSISLSRSGNII-LTSGRDNLHNLFDIRS--- 288 (373)
Q Consensus 223 ~~~g~~l~s-g~~dg~i~iwd~~~--~~~--~~~~~~~~~-----~~v~~~~~~~~~~~l-~s~~~d~~i~~~d~~~--- 288 (373)
+|||+++++ +..++.|++|++.. ++. +..+..... ..+..++|+|+|++| +++..++.+.+|++..
T Consensus 195 spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~ 274 (347)
T 3hfq_A 195 SPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGH 274 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCc
Confidence 999997665 56788999999874 543 222222211 348889999999977 5556689999999873
Q ss_pred cceeeeeeecCCeeecCeeeeEECCCCcEEEEEeC-CCcEEEEEc--cCceEE
Q 017314 289 LEVCGSLRATGNRVASNWSRSCISPDESYVAAGSA-DGSVYIWSI--SKADIV 338 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~-Dg~i~iwd~--~~~~~~ 338 (373)
.+....+..+... ...++|+|||++|++++. ++.|.+|++ .++++.
T Consensus 275 ~~~~~~~~~~~~~----~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 275 LTLIQQISTEGDF----PRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEEEEECSSSC----CCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEeEEEecCCCC----cCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 2333333332211 124679999998888765 489999954 556554
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=2.3e-23 Score=205.84 Aligned_cols=271 Identities=12% Similarity=0.095 Sum_probs=189.9
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecccccc---ceEEEEEcCCCCEEEEEeC---------CCcEEEEEcC
Q 017314 93 SILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLG---SVLDLAITHDNRSVIAASS---------SNNLYVWDVN 160 (373)
Q Consensus 93 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~s~s~---------d~~i~iwd~~ 160 (373)
.+.|+|||+++++ +.|++|++||+.+++....+.++.. .+.+++|+|||++|++++. +++|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 5689999965554 5699999999999987766665544 3889999999999998876 7899999999
Q ss_pred CCeeE--EEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe-ecCc------------------eeE
Q 017314 161 SGRVR--HTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII-FHSN------------------CNA 219 (373)
Q Consensus 161 ~~~~~--~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~-~~~~------------------~~~ 219 (373)
+++.+ ..+ ...+..++|+| +++.|++++ |++|++||+.++....... .+.. ..+
T Consensus 99 ~g~~~~~~~l---~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~ 173 (719)
T 1z68_A 99 NGEFVRGNEL---PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYA 173 (719)
T ss_dssp TTEECCSSCC---CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCC
T ss_pred CCccccceec---CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCccc
Confidence 98762 222 25678889998 566777775 7899999998876543211 1111 147
Q ss_pred EEEccCCCEEEEEeCCC----------------------------------cEEEEECCCCeee--EEE------ecccc
Q 017314 220 LAFSMDGQTIFSGHIDG----------------------------------NLRLWDIQTGKLL--SEV------AAHSL 257 (373)
Q Consensus 220 ~~~~~~g~~l~sg~~dg----------------------------------~i~iwd~~~~~~~--~~~------~~~~~ 257 (373)
++|+|||++|+.++.|. .|++||+.+++.. ..+ ..+ .
T Consensus 174 ~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~-~ 252 (719)
T 1z68_A 174 LWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASS-D 252 (719)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTS-C
T ss_pred EEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCC-c
Confidence 99999999999887653 7889999987642 112 123 3
Q ss_pred cceEEEEEcCCCCEEEEeeC--C--CeEEEEE----ccccceeeeee----ecCCeeec-CeeeeEECCCCcEEE--EEe
Q 017314 258 AAVTSISLSRSGNIILTSGR--D--NLHNLFD----IRSLEVCGSLR----ATGNRVAS-NWSRSCISPDESYVA--AGS 322 (373)
Q Consensus 258 ~~v~~~~~~~~~~~l~s~~~--d--~~i~~~d----~~~~~~~~~~~----~~~~~~~~-~~~~~~~s~~~~~l~--sgs 322 (373)
..+.+++|+||++++++... + ..+.+|| +.+++....+. .+...+.. ......++|||+.|+ +..
T Consensus 253 ~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 332 (719)
T 1z68_A 253 YYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSD 332 (719)
T ss_dssp EEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEEC
T ss_pred ceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEc
Confidence 57899999999887776432 2 2478888 76655443331 22222210 001356899999554 344
Q ss_pred CCC--cEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCC-----CeEEEc
Q 017314 323 ADG--SVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKN-----GVVCVW 372 (373)
Q Consensus 323 ~Dg--~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~d-----g~i~iW 372 (373)
.+| .|++|++..++ ...+..+...|..+.++ +++.|+..+.+ +..++|
T Consensus 333 ~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~ 387 (719)
T 1z68_A 333 KDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIY 387 (719)
T ss_dssp TTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEE
T ss_pred cCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEE
Confidence 555 57777777666 45666667778888888 88877777665 778887
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=7.5e-23 Score=197.35 Aligned_cols=231 Identities=12% Similarity=0.093 Sum_probs=171.9
Q ss_pred ccceEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCeeEEEeecCC-CcEEEEEEeeCCCCEEEEEeC---CCcEEEEEccC
Q 017314 130 LGSVLDLAITHDNRSVIAASS-SNNLYVWDVNSGRVRHTLTGHT-DKVCAVDVSKISSRHVVSAAY---DRTLKVWDLHK 204 (373)
Q Consensus 130 ~~~v~~~~~~~~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~s~s~---D~~i~vwd~~~ 204 (373)
..+|.+++|+|||+.|++++. |++++||++.+++... +..|. ..+..+.|+|. +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-lt~~~~~~~~~~~~spd--~~l~~~~~~~g~~~~~l~~~~~ 97 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-LNREPINSVLDPHYGVG--RVILVRDVSKGAEQHALFKVNT 97 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-CCSSCCSEECEECTTCS--EEEEEEECSTTSCCEEEEEEET
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-eecccccccccccCCCC--eEEEEeccCCCCcceEEEEEec
Confidence 457999999999999999887 9999999997776654 44454 68899999873 67777765 56667766543
Q ss_pred --CeeeeEEeecCceeEEEEccCCCE-EEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCC---
Q 017314 205 --GYCVNTIIFHSNCNALAFSMDGQT-IFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRD--- 278 (373)
Q Consensus 205 --~~~~~~~~~~~~~~~~~~~~~g~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--- 278 (373)
......+.........+|+|||+. +++.+.++.+.+||+.+++...... +. . .+++|+|||++|++++.+
T Consensus 98 ~~~g~~~~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~-~~-~--~~~~~spDG~~la~~~~~~~~ 173 (582)
T 3o4h_A 98 SRPGEEQRLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELAR-LP-G--FGFVSDIRGDLIAGLGFFGGG 173 (582)
T ss_dssp TSTTCCEECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEE-ES-S--CEEEEEEETTEEEEEEEEETT
T ss_pred cCCCccccccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeec-CC-C--ceEEECCCCCEEEEEEEcCCC
Confidence 211122222334456788888863 3344444555699999887654333 32 2 789999999999988777
Q ss_pred -CeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCC--cEEEEEccCceEEEEeccCCccEEEEE---
Q 017314 279 -NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADG--SVYIWSISKADIVRTLKEHTAPVLSCS--- 352 (373)
Q Consensus 279 -~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg--~i~iwd~~~~~~~~~l~~h~~~V~~~~--- 352 (373)
..+.+||+.+.+.. .+..+...+ ...+|||||++|+++..+| .|++||+.+++.. .+.+|...+..++
T Consensus 174 ~~~i~~~d~~~g~~~-~l~~~~~~~----~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 174 RVSLFTSNLSSGGLR-VFDSGEGSF----SSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp EEEEEEEETTTCCCE-EECCSSCEE----EEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred CeEEEEEcCCCCCce-EeecCCCcc----ccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 77999998876643 444333322 3467999999999888888 8999999998887 7788887777777
Q ss_pred -----EcCCCCcEEEEeCCCeEEEcC
Q 017314 353 -----WSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 353 -----~s~~g~~l~s~s~dg~i~iW~ 373 (373)
|||||..+++++.||.+++|+
T Consensus 248 ~~~~~~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred ccceeEcCCCcEEEEEEcCCcEEEEE
Confidence 999998889999999999994
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.90 E-value=5.6e-21 Score=173.04 Aligned_cols=260 Identities=14% Similarity=0.190 Sum_probs=175.6
Q ss_pred ccCcEEEEEEcCCCCEEEEeeCC----CcEEEEeCCC--Cce--eeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEE
Q 017314 87 HEGGCASILFEYNSARLISGGQD----KSIKLWDTNT--GSL--SSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVW 157 (373)
Q Consensus 87 h~~~v~~~~~~~~~~~l~s~s~D----~~v~iwd~~~--~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iw 157 (373)
|......++|+||+++|++++.+ +.|.+|++.. +.. +.....+......+++ ++++|++++ .+++|.+|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEE
Confidence 66677889999999999999986 7999998865 433 2333334455667777 888877776 57899999
Q ss_pred EcCCCeeEEE------eec--------CCCcEEEEEEeeCCCCEE-EEEeCCCcEEEEEccCCee------e------eE
Q 017314 158 DVNSGRVRHT------LTG--------HTDKVCAVDVSKISSRHV-VSAAYDRTLKVWDLHKGYC------V------NT 210 (373)
Q Consensus 158 d~~~~~~~~~------~~~--------h~~~v~~~~~~~~~~~~~-~s~s~D~~i~vwd~~~~~~------~------~~ 210 (373)
++.....+.. ..+ +...+.+++|+| +++++ +++..++.|++|++..... + ..
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~ 204 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEA 204 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEE
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccc
Confidence 9975432211 111 122357788988 56655 5555689999999875431 1 11
Q ss_pred E--eecCceeEEEEccCCCEEEEEe-CCCcEEEEECCCCee--eEEEeccc--ccceEEEEEcCCCCEEEEeeCC--CeE
Q 017314 211 I--IFHSNCNALAFSMDGQTIFSGH-IDGNLRLWDIQTGKL--LSEVAAHS--LAAVTSISLSRSGNIILTSGRD--NLH 281 (373)
Q Consensus 211 ~--~~~~~~~~~~~~~~g~~l~sg~-~dg~i~iwd~~~~~~--~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~d--~~i 281 (373)
. ........++|+|||+++++++ .++.|.+||+.+++. +..+.... ......++|+|+|++|++++.+ +.+
T Consensus 205 ~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i 284 (361)
T 3scy_A 205 FKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGV 284 (361)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEE
T ss_pred eecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEE
Confidence 1 2234477899999999888776 689999999987754 22222211 1346799999999988776654 899
Q ss_pred EEEEcc--ccc--eeeeeeecCCeeecCeeeeEECCCCcEEEEEe-CCCcEEEEEc--cCceEEEEec-cCCccEEEEEE
Q 017314 282 NLFDIR--SLE--VCGSLRATGNRVASNWSRSCISPDESYVAAGS-ADGSVYIWSI--SKADIVRTLK-EHTAPVLSCSW 353 (373)
Q Consensus 282 ~~~d~~--~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs-~Dg~i~iwd~--~~~~~~~~l~-~h~~~V~~~~~ 353 (373)
.+|++. +.. ....+.. +. ....++|+|||++|++++ .++.|.+|++ .++++..... .+...+.|+.|
T Consensus 285 ~v~~~~~~~g~~~~~~~~~~-g~----~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~ 359 (361)
T 3scy_A 285 AIFKVDETNGTLTKVGYQLT-GI----HPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKF 359 (361)
T ss_dssp EEEEECTTTCCEEEEEEEEC-SS----CCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEE
T ss_pred EEEEEcCCCCcEEEeeEecC-CC----CCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEE
Confidence 999985 222 3333322 11 122467999999988877 6789999755 4666654432 24457889998
Q ss_pred c
Q 017314 354 S 354 (373)
Q Consensus 354 s 354 (373)
.
T Consensus 360 ~ 360 (361)
T 3scy_A 360 V 360 (361)
T ss_dssp E
T ss_pred c
Confidence 6
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=3.3e-21 Score=175.01 Aligned_cols=268 Identities=13% Similarity=0.116 Sum_probs=176.5
Q ss_pred EEEeeCC--CcEEEEeC--CCCceeee--cc-ccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC-CCeeEEEee--cCC
Q 017314 103 LISGGQD--KSIKLWDT--NTGSLSST--LY-GCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN-SGRVRHTLT--GHT 172 (373)
Q Consensus 103 l~s~s~D--~~v~iwd~--~~~~~~~~--~~-~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~-~~~~~~~~~--~h~ 172 (373)
|+.|+.. +.|.+|++ .+++.... .. .....+..++|+||+++|++++.+ .|.+||+. +++...... .+
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~- 82 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG- 82 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC-
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC-
Confidence 4445432 45776654 45544221 11 233467789999999999999988 99999997 777654332 11
Q ss_pred CcEEEEEEeeCCCC--EEEEEe-------------CCCcEEEEEcc-CCeeeeEEee-----cCceeEEEEccCCCEEEE
Q 017314 173 DKVCAVDVSKISSR--HVVSAA-------------YDRTLKVWDLH-KGYCVNTIIF-----HSNCNALAFSMDGQTIFS 231 (373)
Q Consensus 173 ~~v~~~~~~~~~~~--~~~s~s-------------~D~~i~vwd~~-~~~~~~~~~~-----~~~~~~~~~~~~g~~l~s 231 (373)
..+..++++| +++ ++++++ .++++.+|++. .+.....+.. ...+..++|+|||++|++
T Consensus 83 g~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~ 161 (365)
T 1jof_A 83 GHPRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYS 161 (365)
T ss_dssp SSGGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred CCCccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEE
Confidence 2244566777 455 344553 69999999997 4554433331 245789999999999887
Q ss_pred EeC-CCcEEEEECC-CCeee--EEEecc-cccceEEEEEcCCCCEEEEeeC-CCeEEEEEcc--cccee---eeeeecCC
Q 017314 232 GHI-DGNLRLWDIQ-TGKLL--SEVAAH-SLAAVTSISLSRSGNIILTSGR-DNLHNLFDIR--SLEVC---GSLRATGN 300 (373)
Q Consensus 232 g~~-dg~i~iwd~~-~~~~~--~~~~~~-~~~~v~~~~~~~~~~~l~s~~~-d~~i~~~d~~--~~~~~---~~~~~~~~ 300 (373)
+.. ++.|++||+. +++.. ..+... ....+..++|+|+|+++++++. ++.+.+|++. +++.. ..+.....
T Consensus 162 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 162 ADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred EcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 654 6799999998 67653 223211 1256889999999999887765 6899999865 33321 11111100
Q ss_pred ---eeec------CeeeeE-ECCCCcEEEEEeCCC------cEEEEEcc-CceEEE---EeccCCccEEEEEEcC---CC
Q 017314 301 ---RVAS------NWSRSC-ISPDESYVAAGSADG------SVYIWSIS-KADIVR---TLKEHTAPVLSCSWSG---LG 357 (373)
Q Consensus 301 ---~~~~------~~~~~~-~s~~~~~l~sgs~Dg------~i~iwd~~-~~~~~~---~l~~h~~~V~~~~~s~---~g 357 (373)
.... ....++ ++|||++|++++.+. +|.+|++. +++... ....+...+..++|+| ||
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg 321 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD 321 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC
Confidence 0000 123467 999999887765432 89999996 566543 2333555567899999 89
Q ss_pred CcEEEEeCC-CeEEEcC
Q 017314 358 KPLASADKN-GVVCVWT 373 (373)
Q Consensus 358 ~~l~s~s~d-g~i~iW~ 373 (373)
++|++++.+ +.|.+|+
T Consensus 322 ~~l~v~~~~~~~v~v~~ 338 (365)
T 1jof_A 322 EWMAITDDQEGWLEIYR 338 (365)
T ss_dssp TEEEEECSSSCEEEEEE
T ss_pred CEEEEEEcCCCeEEEEE
Confidence 999998875 8999984
No 160
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.89 E-value=8.2e-22 Score=180.34 Aligned_cols=272 Identities=14% Similarity=0.062 Sum_probs=184.2
Q ss_pred EEEEEEcCCCCEEEEeeCC---CcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q 017314 91 CASILFEYNSARLISGGQD---KSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHT 167 (373)
Q Consensus 91 v~~~~~~~~~~~l~s~s~D---~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 167 (373)
+..++|+|||++|+.++.+ ..|.+||+.+++......++......+.|+|||+.|+.++.++.|++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 6678899999998777543 4688889988876544433332233368999999999999999999999999887666
Q ss_pred eecCCCcEEE---E----------------EEeeCCCCEEEEE-----eCCCcEEEEEccCCeeeeEEeecCceeEEEEc
Q 017314 168 LTGHTDKVCA---V----------------DVSKISSRHVVSA-----AYDRTLKVWDLHKGYCVNTIIFHSNCNALAFS 223 (373)
Q Consensus 168 ~~~h~~~v~~---~----------------~~~~~~~~~~~s~-----s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~ 223 (373)
+..+...... + .++| +++.++.+ ..+..|.+||+.++...........+..+.|+
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~s 196 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYR 196 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceEC
Confidence 6655443222 1 2233 22222222 35668999999988765555455567889999
Q ss_pred c-CCCEEEEEeCC------CcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCC-----CeEEEEEccccc
Q 017314 224 M-DGQTIFSGHID------GNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRD-----NLHNLFDIRSLE 290 (373)
Q Consensus 224 ~-~g~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~ 290 (373)
| ++..|+..+.+ ..|.+||+.+++.. .+..+. ...+..+.|+|+|+.|+..+.+ +.+.+||+.+.+
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 197 PFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp TTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred CCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC
Confidence 9 78877665543 36888998765433 333222 2468889999999987766543 449999998765
Q ss_pred eeeeeeecCCeeecCeeeeEECC-CCcEEEEEe----------------CCCcEEEEEccCceEEEEeccCCc-------
Q 017314 291 VCGSLRATGNRVASNWSRSCISP-DESYVAAGS----------------ADGSVYIWSISKADIVRTLKEHTA------- 346 (373)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~sgs----------------~Dg~i~iwd~~~~~~~~~l~~h~~------- 346 (373)
........ . +. ..++| ||+++++++ .++.|++||+.+++.. .+..|..
T Consensus 276 ~~~l~~~~-~-----~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~ 347 (396)
T 3c5m_A 276 NEEVMVMP-P-----CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDG 347 (396)
T ss_dssp EEEEEECC-S-----EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTT
T ss_pred eEEeeeCC-C-----CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceE-EccCCCCccccccc
Confidence 43221111 1 12 56888 999888765 3478999999887643 3444544
Q ss_pred ----cEEEEEEcCCCCcEEEEeC-CCeEEEc
Q 017314 347 ----PVLSCSWSGLGKPLASADK-NGVVCVW 372 (373)
Q Consensus 347 ----~V~~~~~s~~g~~l~s~s~-dg~i~iW 372 (373)
.+..++|+|||++|+.++. ++...||
T Consensus 348 ~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~ 378 (396)
T 3c5m_A 348 DRQITHPHPSFTPNDDGVLFTSDFEGVPAIY 378 (396)
T ss_dssp BSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred cccCCCCCceEccCCCeEEEEecCCCCceEE
Confidence 2567899999998887765 5666665
No 161
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.87 E-value=6.6e-20 Score=166.05 Aligned_cols=267 Identities=12% Similarity=0.140 Sum_probs=192.6
Q ss_pred eEEecCccCcEEEEEEcCCCCEEEEee----------CCCcEEEEeCCCCceeeecccc------ccceEEEEEcCCCCE
Q 017314 81 KHKINAHEGGCASILFEYNSARLISGG----------QDKSIKLWDTNTGSLSSTLYGC------LGSVLDLAITHDNRS 144 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~ 144 (373)
...+..+..+ .++|+||+++|++++ .|++|.+||..+++....+... ......++|+|||++
T Consensus 44 ~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~ 121 (361)
T 2oiz_A 44 LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKF 121 (361)
T ss_dssp EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSE
T ss_pred EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCE
Confidence 3455555555 899999999999886 3678999999988887766432 234567899999999
Q ss_pred EEEEeC--CCcEEEEEcCCCeeEEE-eecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC-CeeeeEEe------ec
Q 017314 145 VIAASS--SNNLYVWDVNSGRVRHT-LTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK-GYCVNTII------FH 214 (373)
Q Consensus 145 l~s~s~--d~~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~-~~~~~~~~------~~ 214 (373)
|+++.. +++|.+||+.+++.+.. +... . ...+.+.|.....+++.+.||++.+|+... +....... ..
T Consensus 122 l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~ 199 (361)
T 2oiz_A 122 IVLQNASPATSIGIVDVAKGDYVEDVTAAA-G-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVK 199 (361)
T ss_dssp EEEEEESSSEEEEEEETTTTEEEEEEGGGT-T-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTT
T ss_pred EEEECCCCCCeEEEEECCCCcEEEEEecCC-C-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCC
Confidence 998874 58999999999988877 5432 1 222445565556788999999999999865 44331111 11
Q ss_pred CceeEEEEccCCCEEEEEeCCCcEEEEECCCCee--eEEEeccc---------ccceEEEEEcCCCCEEEEeeC------
Q 017314 215 SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKL--LSEVAAHS---------LAAVTSISLSRSGNIILTSGR------ 277 (373)
Q Consensus 215 ~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~--~~~~~~~~---------~~~v~~~~~~~~~~~l~s~~~------ 277 (373)
.....+.++|++..++..+.++.|.++|+..... +..+.... ......++|+|+++.++.+..
T Consensus 200 ~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~ 279 (361)
T 2oiz_A 200 DDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEG 279 (361)
T ss_dssp TSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTT
T ss_pred CCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcc
Confidence 1122334467788888788899999999975432 12211100 011112789999887776543
Q ss_pred -----CCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCc--eEEEEeccCCccEEE
Q 017314 278 -----DNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKA--DIVRTLKEHTAPVLS 350 (373)
Q Consensus 278 -----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~--~~~~~l~~h~~~V~~ 350 (373)
.+.+.+||+.+.+.+..+.... . ..++|+|||++|++++. ++|.+||..++ +.++.+..+......
T Consensus 280 ~~~~~~~~v~viD~~t~~~v~~i~~~~-p-----~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~ 352 (361)
T 2oiz_A 280 THKFPAAEIWVMDTKTKQRVARIPGRD-A-----LSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQ 352 (361)
T ss_dssp CTTCCCSEEEEEETTTTEEEEEEECTT-C-----CEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEE
T ss_pred cccCCCceEEEEECCCCcEEEEEecCC-e-----eEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEE
Confidence 3589999999999888887654 1 23679999999998887 99999999999 999998777777789
Q ss_pred EEEcCCCC
Q 017314 351 CSWSGLGK 358 (373)
Q Consensus 351 ~~~s~~g~ 358 (373)
++++|+|+
T Consensus 353 ~~~~p~G~ 360 (361)
T 2oiz_A 353 VQFHPVGG 360 (361)
T ss_dssp EEECCCSC
T ss_pred EEecCCCC
Confidence 99999986
No 162
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.87 E-value=3.6e-20 Score=181.27 Aligned_cols=286 Identities=11% Similarity=0.018 Sum_probs=194.1
Q ss_pred EecCccCcEEEEEEcCCCCEEEEe--eCCCcEEEEeCCCCceeeeccccccceE---------EEEEc--CCCCE-EEEE
Q 017314 83 KINAHEGGCASILFEYNSARLISG--GQDKSIKLWDTNTGSLSSTLYGCLGSVL---------DLAIT--HDNRS-VIAA 148 (373)
Q Consensus 83 ~~~~h~~~v~~~~~~~~~~~l~s~--s~D~~v~iwd~~~~~~~~~~~~~~~~v~---------~~~~~--~~~~~-l~s~ 148 (373)
.+.+|...+..++|+++.-.+++. +.++..+||....+.....+..+...+. ...|+ |||+. |+.+
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~ 97 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFT 97 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEE
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEE
Confidence 456788999999999887677777 6688999999654444555555555544 55555 99998 7665
Q ss_pred eC-CCcEEEEEcC--C-CeeEEEeec-----CCCcEEEEEEeeCCCCEEEEEeCC----------CcEEEEEccC-----
Q 017314 149 SS-SNNLYVWDVN--S-GRVRHTLTG-----HTDKVCAVDVSKISSRHVVSAAYD----------RTLKVWDLHK----- 204 (373)
Q Consensus 149 s~-d~~i~iwd~~--~-~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~s~s~D----------~~i~vwd~~~----- 204 (373)
+. +..|.+|++. + ++ ...+.. |...+..++|+| +++.|++++.| .+|.+||+.+
T Consensus 98 ~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 98 HFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp BTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred ECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 54 4566666665 2 43 445555 677788999998 67788888877 5899999987
Q ss_pred -CeeeeEE-eecCceeEEEEccCCCEEEEEeCCC--------cEEEEECC-CC--eeeEEEecccccceEEEEEcCCCCE
Q 017314 205 -GYCVNTI-IFHSNCNALAFSMDGQTIFSGHIDG--------NLRLWDIQ-TG--KLLSEVAAHSLAAVTSISLSRSGNI 271 (373)
Q Consensus 205 -~~~~~~~-~~~~~~~~~~~~~~g~~l~sg~~dg--------~i~iwd~~-~~--~~~~~~~~~~~~~v~~~~~~~~~~~ 271 (373)
+...... ..+..+..++|+|||++|+.++.++ .|++||+. ++ .....+..+....+..+.|+|||++
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 5443222 2234467789999999999777553 79999998 56 2333444433367899999999998
Q ss_pred EEEeeCCC--eEEEEEccccceeeeeeecCCeeecC----eeeeEECCCCcEEEEEeCCCcEEEEEc--cCceEEEEecc
Q 017314 272 ILTSGRDN--LHNLFDIRSLEVCGSLRATGNRVASN----WSRSCISPDESYVAAGSADGSVYIWSI--SKADIVRTLKE 343 (373)
Q Consensus 272 l~s~~~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~----~~~~~~s~~~~~l~sgs~Dg~i~iwd~--~~~~~~~~l~~ 343 (373)
+++++.++ .+.+||+.+.+.......+....... ....+++|++.++++++. +.++||.+ ..++ +..+..
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~ 333 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAG 333 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCS
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecC
Confidence 88888888 45555554444322222111110111 123678899999999999 99999954 4454 677888
Q ss_pred CCccEEEE-EEcCCCCcEEEEeCCCeEEEc
Q 017314 344 HTAPVLSC-SWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 344 h~~~V~~~-~~s~~g~~l~s~s~dg~i~iW 372 (373)
|...+..+ +++++.-++++++.+....||
T Consensus 334 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~ 363 (662)
T 3azo_A 334 PWTEWAATLTVSGTRAVGVAASPRTAYEVV 363 (662)
T ss_dssp SCCEEEEEEEEETTEEEEEEEETTEEEEEE
T ss_pred CCCeEEEEEecCCCEEEEEEcCCCCCCEEE
Confidence 88888877 555444455566666655555
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.87 E-value=1.9e-19 Score=161.07 Aligned_cols=245 Identities=16% Similarity=0.144 Sum_probs=185.0
Q ss_pred cCcEEEEEEcCCCCEEEEeeCC------------------------CcEEEEeCCCCceeeecc-ccccceEEEEEcCCC
Q 017314 88 EGGCASILFEYNSARLISGGQD------------------------KSIKLWDTNTGSLSSTLY-GCLGSVLDLAITHDN 142 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~D------------------------~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~ 142 (373)
-+.+.+++++++|+.+++.+.+ ++|.+||..+++....+. ++...+..++++++|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 3679999999999999988887 479999999888765543 344578899999999
Q ss_pred CEEEEEeCCCcEEEEEcCCCe-eEEEe---------ecCCCcEEEEEEeeCCCCEEEEEe-CCCcEEEEEccCCeeeeEE
Q 017314 143 RSVIAASSSNNLYVWDVNSGR-VRHTL---------TGHTDKVCAVDVSKISSRHVVSAA-YDRTLKVWDLHKGYCVNTI 211 (373)
Q Consensus 143 ~~l~s~s~d~~i~iwd~~~~~-~~~~~---------~~h~~~v~~~~~~~~~~~~~~s~s-~D~~i~vwd~~~~~~~~~~ 211 (373)
+.+++...++.|++||..... .+..+ .++......+++++.++..+++.+ .++.|++|| ..+..+..+
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~ 181 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQW 181 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEe
Confidence 988888889999999986542 44455 345557889999875677788886 699999999 456655555
Q ss_pred eec-----------CceeEEEEccC-CCEEEEEeCCCcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCC
Q 017314 212 IFH-----------SNCNALAFSMD-GQTIFSGHIDGNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRD 278 (373)
Q Consensus 212 ~~~-----------~~~~~~~~~~~-g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d 278 (373)
... .....++++|+ |.++++...++.|++||..+++.+..+.... ...+..++++| +..+.
T Consensus 182 ~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~----- 255 (329)
T 3fvz_A 182 GEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFA----- 255 (329)
T ss_dssp CEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEE-----
T ss_pred ccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEE-----
Confidence 322 12688999998 7777777889999999999888877764321 23455666666 22111
Q ss_pred CeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEec---cCCccEEEEEEcC
Q 017314 279 NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLK---EHTAPVLSCSWSG 355 (373)
Q Consensus 279 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~---~h~~~V~~~~~s~ 355 (373)
.+|...++.+.+..|++|++.+++.+..+. ++.....+++++|
T Consensus 256 ----------------------------------~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~ 301 (329)
T 3fvz_A 256 ----------------------------------VNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASE 301 (329)
T ss_dssp ----------------------------------EECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECT
T ss_pred ----------------------------------eCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECC
Confidence 123333444556789999999999988874 5677789999999
Q ss_pred CCCcEEEEeCCCeEEEcC
Q 017314 356 LGKPLASADKNGVVCVWT 373 (373)
Q Consensus 356 ~g~~l~s~s~dg~i~iW~ 373 (373)
+|..+++...++.|++|+
T Consensus 302 dG~lyvad~~~~~I~~~~ 319 (329)
T 3fvz_A 302 DGTVYIGDAHTNTVWKFT 319 (329)
T ss_dssp TSEEEEEESSSCCEEEEE
T ss_pred CCCEEEEECCCCEEEEEe
Confidence 998888888999999884
No 164
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=5.2e-21 Score=177.49 Aligned_cols=206 Identities=14% Similarity=0.145 Sum_probs=148.6
Q ss_pred CcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCC-----------e-----eeeEEeecC
Q 017314 152 NNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKG-----------Y-----CVNTIIFHS 215 (373)
Q Consensus 152 ~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~-----------~-----~~~~~~~~~ 215 (373)
+.+++|+.... .+...+..+++++ ...++++++.|+ +++|+...- . ....+....
T Consensus 23 ~~vri~~~~~~-------~~~~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (434)
T 2oit_A 23 KKVRIFDSPEE-------LPKERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKF 93 (434)
T ss_dssp CEEECSCCCSS-------CCCSCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSS
T ss_pred eeEEecCCccc-------cCCCCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCC
Confidence 45777764311 1234567778877 567888888888 999875321 0 011222334
Q ss_pred ceeEEEEccCCCEEE----EEeCCCcEEEEECCCC--------ee---eEEEecccccceEEEEEcCC-CCEEEEeeCCC
Q 017314 216 NCNALAFSMDGQTIF----SGHIDGNLRLWDIQTG--------KL---LSEVAAHSLAAVTSISLSRS-GNIILTSGRDN 279 (373)
Q Consensus 216 ~~~~~~~~~~g~~l~----sg~~dg~i~iwd~~~~--------~~---~~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~ 279 (373)
.+.+++|+|+|++|+ +|+.|+.|++||+.++ +. +..+..|. ..|.+++|+|+ +++|++++.|+
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAG-GMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGG-GSEEEEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCC-CceEEEEECCCCCCEEEEEECCC
Confidence 589999999999999 7889999999998754 22 23334454 78999999998 78999999999
Q ss_pred eEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccC-------CccEEEEE
Q 017314 280 LHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEH-------TAPVLSCS 352 (373)
Q Consensus 280 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h-------~~~V~~~~ 352 (373)
.+++||+++.........+.. ....++++|+|++|++|+.||+|++||+. ++....+..| ...|.+++
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~----~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~ 247 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTV----AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVL 247 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGG----CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEE
T ss_pred eEEEEEcCCCcceeeccCCCC----ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEE
Confidence 999999998754433333332 33457899999999999999999999998 5555555433 34899999
Q ss_pred EcCCCCcEEEE-eCCCe------EEEc
Q 017314 353 WSGLGKPLASA-DKNGV------VCVW 372 (373)
Q Consensus 353 ~s~~g~~l~s~-s~dg~------i~iW 372 (373)
|++++.++++. +.||. +++|
T Consensus 248 w~~~~~~l~~~~~~dg~~~~~~~v~i~ 274 (434)
T 2oit_A 248 WIGTYVFAIVYAAADGTLETSPDVVMA 274 (434)
T ss_dssp EEETTEEEEEEEETTCCSSSCCEEEEE
T ss_pred EecCceEEEEEccCCCccCCCCceEEE
Confidence 99998877553 34433 6676
No 165
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.86 E-value=6.7e-20 Score=166.38 Aligned_cols=242 Identities=12% Similarity=0.120 Sum_probs=166.8
Q ss_pred cCcEEEEEEcCCCCEEEEeeCCCcEEEEeCC-CCceeeecccc-ccceEEEEEcCCCCE--EEEEe-------------C
Q 017314 88 EGGCASILFEYNSARLISGGQDKSIKLWDTN-TGSLSSTLYGC-LGSVLDLAITHDNRS--VIAAS-------------S 150 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~-~~~~~~~~~~~-~~~v~~~~~~~~~~~--l~s~s-------------~ 150 (373)
...+..++|+||+++|++++.+ .|.+||+. +++........ .+.+..++|+|||++ +++++ .
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 3467789999999999999988 99999997 77654332210 123455889999995 44543 6
Q ss_pred CCcEEEEEcC-CCeeEEEee----cCCCcEEEEEEeeCCCCEEEEEe-CCCcEEEEEcc-CCeee--eEEee---cCcee
Q 017314 151 SNNLYVWDVN-SGRVRHTLT----GHTDKVCAVDVSKISSRHVVSAA-YDRTLKVWDLH-KGYCV--NTIIF---HSNCN 218 (373)
Q Consensus 151 d~~i~iwd~~-~~~~~~~~~----~h~~~v~~~~~~~~~~~~~~s~s-~D~~i~vwd~~-~~~~~--~~~~~---~~~~~ 218 (373)
++++.+|++. +++....+. .+...+.++.|+| ++++++++. .++.|++||+. +++.. ..+.. ...+.
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 8899999997 465544443 2556788999998 566776655 47899999998 66543 22321 24578
Q ss_pred EEEEccCCCEEEEEeC-CCcEEEEECC--CCeee---EEEeccc----c-c-------ceEEEE-EcCCCCEEEEeeCC-
Q 017314 219 ALAFSMDGQTIFSGHI-DGNLRLWDIQ--TGKLL---SEVAAHS----L-A-------AVTSIS-LSRSGNIILTSGRD- 278 (373)
Q Consensus 219 ~~~~~~~g~~l~sg~~-dg~i~iwd~~--~~~~~---~~~~~~~----~-~-------~v~~~~-~~~~~~~l~s~~~d- 278 (373)
.++|+|||+++++++. ++.|.+|++. +++.. ..+.... . . .+..++ |+|+|++|++++.+
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 8999999999987765 7899999865 55542 1222110 0 1 478999 99999988876643
Q ss_pred C-----eEEEEEcc-ccceeee---eeecCCeeecCeeeeEECC---CCcEEEEEeCC-CcEEEEEccCc
Q 017314 279 N-----LHNLFDIR-SLEVCGS---LRATGNRVASNWSRSCISP---DESYVAAGSAD-GSVYIWSISKA 335 (373)
Q Consensus 279 ~-----~i~~~d~~-~~~~~~~---~~~~~~~~~~~~~~~~~s~---~~~~l~sgs~D-g~i~iwd~~~~ 335 (373)
+ .+.+|++. +++.... ....... ...++++| ||++|++++.+ +.|.+|++...
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~----~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSG----GHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCC----TTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCC----cccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 3 89999986 4433221 1111111 12356889 89999998864 89999999776
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.86 E-value=1.2e-19 Score=164.26 Aligned_cols=259 Identities=13% Similarity=0.156 Sum_probs=183.1
Q ss_pred CCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCCeeEEEeecC------
Q 017314 108 QDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS----------SSNNLYVWDVNSGRVRHTLTGH------ 171 (373)
Q Consensus 108 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~h------ 171 (373)
.|+.|.+||..+++....+..+..+ .++|+||++++++++ .+++|.+||+.+++.+.++...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999999988887776665 899999999999886 3678999999999888777532
Q ss_pred CCcEEEEEEeeCCCCEEEEEeC--CCcEEEEEccCCeeeeE-EeecCceeEEEEccCC-CEEEEEeCCCcEEEEECCC-C
Q 017314 172 TDKVCAVDVSKISSRHVVSAAY--DRTLKVWDLHKGYCVNT-IIFHSNCNALAFSMDG-QTIFSGHIDGNLRLWDIQT-G 246 (373)
Q Consensus 172 ~~~v~~~~~~~~~~~~~~s~s~--D~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~g-~~l~sg~~dg~i~iwd~~~-~ 246 (373)
......+.++| ++++++++.. +++|.+||+.+++.+.+ +.. ..+..+.+.|++ ..+++.+.||.+.+|++.. +
T Consensus 107 g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g 184 (361)
T 2oiz_A 107 LNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDG 184 (361)
T ss_dssp CCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTS
T ss_pred CCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCC
Confidence 23456678887 5778877763 68999999999987766 332 233345677876 6778889999999999865 5
Q ss_pred eeeEEEec----ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce--eeeeeec------CCeeecCeeeeEECCC
Q 017314 247 KLLSEVAA----HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV--CGSLRAT------GNRVASNWSRSCISPD 314 (373)
Q Consensus 247 ~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~--~~~~~~~------~~~~~~~~~~~~~s~~ 314 (373)
+....... +.......+.+++++..++..+.++.+.++|+..... ...+... .......+...+++|+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~d 264 (361)
T 2oiz_A 185 KVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRA 264 (361)
T ss_dssp SEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETT
T ss_pred cEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecC
Confidence 54422110 0000111223356677777777888999999864321 1111100 0001111223578999
Q ss_pred CcEEEEEeC-----------CCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 315 ESYVAAGSA-----------DGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 315 ~~~l~sgs~-----------Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+..+..+.. .+.|.+||+.+++.+..+..+. +.+++|+|||++|++++. +.|.+||
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D 331 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYD 331 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEE
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEE
Confidence 887766543 3479999999999999998877 899999999999988886 9999995
No 167
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=1.7e-19 Score=161.86 Aligned_cols=233 Identities=12% Similarity=0.072 Sum_probs=164.4
Q ss_pred cEEEEEEcCCCCEE-EEeeCCCcEEEEeCCCCceeeecccc------ccceEEEEEcCCCCEEEEEeCC-----------
Q 017314 90 GCASILFEYNSARL-ISGGQDKSIKLWDTNTGSLSSTLYGC------LGSVLDLAITHDNRSVIAASSS----------- 151 (373)
Q Consensus 90 ~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~~~~~~l~s~s~d----------- 151 (373)
.+..++|+|+++.+ ++++.++.|.+||+.+++....+... ...+..++|+||++++++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 123 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVK 123 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccC
Confidence 56789999999865 45567899999999998877665432 2237789999999999998865
Q ss_pred -CcEEEEEcCCCe---eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC------------
Q 017314 152 -NNLYVWDVNSGR---VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS------------ 215 (373)
Q Consensus 152 -~~i~iwd~~~~~---~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~------------ 215 (373)
+.|.+||+.+++ .+..+..+ ..+.+++++| +++ ++.++. .|.+||+.++.....+..+.
T Consensus 124 ~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~-dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (349)
T 1jmx_B 124 PPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAAD-DGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVL 198 (349)
T ss_dssp CCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECT-TSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCC
T ss_pred CCeEEEEECCCccccceeeeccCC-CcccceeECC-CCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccce
Confidence 899999998854 33344433 3577888988 455 555543 49999999988776665432
Q ss_pred -------------ceeEEEEccCCCEE-----------EEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcC-CCC
Q 017314 216 -------------NCNALAFSMDGQTI-----------FSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSR-SGN 270 (373)
Q Consensus 216 -------------~~~~~~~~~~g~~l-----------~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~ 270 (373)
....+++++++... .....++.+++|++. .. ...+.+++++| +++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~sp~dg~ 268 (349)
T 1jmx_B 199 YFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFA---------DL-TELYFTGLRSPKDPN 268 (349)
T ss_dssp CCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEE---------EC-SSCEEEEEECSSCTT
T ss_pred eeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccc---------cC-CCcceeeEecCCCCC
Confidence 23446666554221 122233444444331 12 24678999999 999
Q ss_pred EEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccC
Q 017314 271 IILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEH 344 (373)
Q Consensus 271 ~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h 344 (373)
+++++ ++.+.+||+.+.+....+..... ...++++|+|++|++++.++.|++||+.+++.+..+..+
T Consensus 269 ~l~~~--~~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 269 QIYGV--LNRLAKYDLKQRKLIKAANLDHT-----YYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEE--ESEEEEEETTTTEEEEEEECSSC-----CCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EEEEE--cCeEEEEECccCeEEEEEcCCCC-----ccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 99888 88999999998877666543222 124679999999988888999999999999988877644
No 168
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.86 E-value=2.3e-21 Score=191.53 Aligned_cols=231 Identities=14% Similarity=0.083 Sum_probs=165.0
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCC---cEEEEEEeeCCCCEEEEEeC---------CCcEEEEEc
Q 017314 135 DLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTD---KVCAVDVSKISSRHVVSAAY---------DRTLKVWDL 202 (373)
Q Consensus 135 ~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~---~v~~~~~~~~~~~~~~s~s~---------D~~i~vwd~ 202 (373)
+++|+||+. ++..+.|++|++||+.+++....+.+|.. .+.+++|+| ++++|++++. |++|++||+
T Consensus 20 ~~~~s~dg~-~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 20 FPNWISGQE-YLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCEESSSSE-EEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCe-EEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEEC
Confidence 578999995 55556799999999999998877776654 388999998 6788887776 799999999
Q ss_pred cCCeeeeEEeecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccce-----------------EEEEE
Q 017314 203 HKGYCVNTIIFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAV-----------------TSISL 265 (373)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v-----------------~~~~~ 265 (373)
.++..+........+..++|||||+.|+.+. |+.|++||+.+++............+ .+++|
T Consensus 98 ~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 98 SNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp TTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred CCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 9887631112234578899999999999875 78999999988876542212111112 48999
Q ss_pred cCCCCEEEEeeCCC----------------------------------eEEEEEcccccee--eee------eecCCeee
Q 017314 266 SRSGNIILTSGRDN----------------------------------LHNLFDIRSLEVC--GSL------RATGNRVA 303 (373)
Q Consensus 266 ~~~~~~l~s~~~d~----------------------------------~i~~~d~~~~~~~--~~~------~~~~~~~~ 303 (373)
+|||++|+.++.|. .+.+||+.+.+.. ..+ ..+...
T Consensus 177 SPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~-- 254 (719)
T 1z68_A 177 SPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYY-- 254 (719)
T ss_dssp CTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEE--
T ss_pred CCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcce--
Confidence 99999999987652 6788998876532 011 111111
Q ss_pred cCeeeeEECCCCcEEEEEeCC----CcEEEEE----ccCceEEEEe----ccCCccEE-----EEEEcCCCCcEEE--Ee
Q 017314 304 SNWSRSCISPDESYVAAGSAD----GSVYIWS----ISKADIVRTL----KEHTAPVL-----SCSWSGLGKPLAS--AD 364 (373)
Q Consensus 304 ~~~~~~~~s~~~~~l~sgs~D----g~i~iwd----~~~~~~~~~l----~~h~~~V~-----~~~~s~~g~~l~s--~s 364 (373)
....+++||++++++.... ..|++|| +.+++....+ .+|.+.|. .++|||||+.|+. ..
T Consensus 255 --~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 332 (719)
T 1z68_A 255 --FSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSD 332 (719)
T ss_dssp --EEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEEC
T ss_pred --EEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEc
Confidence 2346799999888775433 2488899 7777765555 46777776 8899999996654 55
Q ss_pred CCCeEEEc
Q 017314 365 KNGVVCVW 372 (373)
Q Consensus 365 ~dg~i~iW 372 (373)
.+|..+||
T Consensus 333 ~~g~~~l~ 340 (719)
T 1z68_A 333 KDGYKHIH 340 (719)
T ss_dssp TTSCEEEE
T ss_pred cCCceEEE
Confidence 66654444
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.85 E-value=6.9e-20 Score=181.50 Aligned_cols=268 Identities=13% Similarity=0.078 Sum_probs=181.3
Q ss_pred EEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccc-----eEEEEEcCCCCEEEEEeCC---------CcEEE
Q 017314 91 CASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGS-----VLDLAITHDNRSVIAASSS---------NNLYV 156 (373)
Q Consensus 91 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~s~s~d---------~~i~i 156 (373)
..++.|++||.+++++ |++|++||+.+++....+.+|... ..+++|||||++|+.++.+ +.+.+
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 4468999999988886 999999999999887777666532 3457899999999998887 45679
Q ss_pred EEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe-ecC------------------ce
Q 017314 157 WDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII-FHS------------------NC 217 (373)
Q Consensus 157 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~-~~~------------------~~ 217 (373)
||+.+++.. .+..|...+...+|+| +++.|+.+ .|+.|.+||+.++...+.-. .+. ..
T Consensus 97 ~d~~~~~~~-~l~~~~~~~~~~~~SP-dG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 97 YDLNKRQLI-TEERIPNNTQWVTWSP-VGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EETTTTEEC-CSSCCCTTEEEEEECS-STTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EECCCCcEE-EcccCCCcceeeEECC-CCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 999999865 4677888899999999 56677766 47899999998876443111 111 11
Q ss_pred eEEEEccCCCEEEEEeCCC------------------------------------cEEEEECCC---Ce--eeEEEec--
Q 017314 218 NALAFSMDGQTIFSGHIDG------------------------------------NLRLWDIQT---GK--LLSEVAA-- 254 (373)
Q Consensus 218 ~~~~~~~~g~~l~sg~~dg------------------------------------~i~iwd~~~---~~--~~~~~~~-- 254 (373)
..+.|||||+.|+.++.|. .|++||+.+ ++ ....+..
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 3488999999999875332 478899988 73 2233332
Q ss_pred ---ccccceEEEEEcCCCCEEEEee----CCCeEEEEEccccc----e--eeee--eecCCeeec-CeeeeEECCCCcEE
Q 017314 255 ---HSLAAVTSISLSRSGNIILTSG----RDNLHNLFDIRSLE----V--CGSL--RATGNRVAS-NWSRSCISPDESYV 318 (373)
Q Consensus 255 ---~~~~~v~~~~~~~~~~~l~s~~----~d~~i~~~d~~~~~----~--~~~~--~~~~~~~~~-~~~~~~~s~~~~~l 318 (373)
.+...+..++|+|||+.++... .+..+.+||+.+++ + ...+ ..+...+.. ......|+|||+.|
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 1235689999999999666542 23479999988765 1 1111 112211110 01124689999987
Q ss_pred E-EEeC-CC--cEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeC
Q 017314 319 A-AGSA-DG--SVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADK 365 (373)
Q Consensus 319 ~-sgs~-Dg--~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~ 365 (373)
+ ..+. +| .|++||+..+.... +......|..+.+ +|++.|+..+.
T Consensus 334 ~~~~s~~~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~~-~d~~~i~f~~~ 382 (740)
T 4a5s_A 334 YKIISNEEGYRHICYFQIDKKDCTF-ITKGTWEVIGIEA-LTSDYLYYISN 382 (740)
T ss_dssp EEEEECTTSCEEEEEEETTCSSCEE-SCCSSSCEEEEEE-ECSSEEEEEES
T ss_pred EEEEEcCCCceEEEEEECCCCceEe-cccCCEEEEEEEE-EeCCEEEEEEe
Confidence 7 6654 33 68888888766544 4444555665542 44665554443
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.85 E-value=2.4e-18 Score=150.49 Aligned_cols=238 Identities=12% Similarity=0.229 Sum_probs=174.6
Q ss_pred ccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEee------cCCCcEEEEEEeeCCCCEEEEEeC-CCcEEEE
Q 017314 128 GCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLT------GHTDKVCAVDVSKISSRHVVSAAY-DRTLKVW 200 (373)
Q Consensus 128 ~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~------~h~~~v~~~~~~~~~~~~~~s~s~-D~~i~vw 200 (373)
++...+.+++++++++.+++.+.++.|++||.. ++....+. +|...+..+++.+.++..+++... ++.|.+|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 445668899999999988888889999999987 55555553 344567888885445555555543 8999999
Q ss_pred EccCCeeeeEEeec--CceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEec-ccccceEEEEEcCCCCEEEEeeC
Q 017314 201 DLHKGYCVNTIIFH--SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAA-HSLAAVTSISLSRSGNIILTSGR 277 (373)
Q Consensus 201 d~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~ 277 (373)
| ..+..+..+... ..+..++++|+|+.+++...++.|.+||.. ++.+..+.. .....+..++++++++++++...
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred C-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 9 556655555322 347899999999988888888999999964 555555532 22246899999999998888888
Q ss_pred CCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCC-cEEEEEccCceEEEEeccCCc--cEEEEEEc
Q 017314 278 DNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADG-SVYIWSISKADIVRTLKEHTA--PVLSCSWS 354 (373)
Q Consensus 278 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg-~i~iwd~~~~~~~~~l~~h~~--~V~~~~~s 354 (373)
++.|.+||... +....+...+. ......++++|+|.++++...++ .|++|+. +++.+..+..+.. .+.+++|+
T Consensus 184 ~~~i~~~~~~g-~~~~~~~~~g~--~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~ 259 (286)
T 1q7f_A 184 AHCVKVFNYEG-QYLRQIGGEGI--TNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALM 259 (286)
T ss_dssp GTEEEEEETTC-CEEEEESCTTT--SCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEE
T ss_pred CCEEEEEcCCC-CEEEEEccCCc--cCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEEC
Confidence 99999999743 33344432211 01223478999999999888886 9999995 5666666665433 47899999
Q ss_pred CCCCcEEEEeCCCeEEEcC
Q 017314 355 GLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 355 ~~g~~l~s~s~dg~i~iW~ 373 (373)
|+|+++++ +.|+.|++|+
T Consensus 260 ~~g~l~vs-~~~~~v~v~~ 277 (286)
T 1q7f_A 260 DDGSVVLA-SKDYRLYIYR 277 (286)
T ss_dssp TTTEEEEE-ETTTEEEEEE
T ss_pred CCCcEEEE-CCCCeEEEEE
Confidence 99987777 6799999994
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=6e-19 Score=157.79 Aligned_cols=270 Identities=10% Similarity=0.089 Sum_probs=190.5
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 168 (373)
..|.++.|++++..+++.+.++.++.| .+.....+..+...+.+++|++++++++++..++.|.+||..+++.....
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 345677888888888888889999999 34555566666677889999999998788888999999999988876655
Q ss_pred ecCCCcEEEEEEeeCCCCEEEEEeCC----CcEEEEEccCCeeeeEEe---ecCceeEEEEccCCCEEEEEeC------C
Q 017314 169 TGHTDKVCAVDVSKISSRHVVSAAYD----RTLKVWDLHKGYCVNTII---FHSNCNALAFSMDGQTIFSGHI------D 235 (373)
Q Consensus 169 ~~h~~~v~~~~~~~~~~~~~~s~s~D----~~i~vwd~~~~~~~~~~~---~~~~~~~~~~~~~g~~l~sg~~------d 235 (373)
..+...+.++++++ +++++++...+ +.|.+||..++.....+. ....++.++++|+|+.+++... .
T Consensus 83 ~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~ 161 (333)
T 2dg1_A 83 VSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPL 161 (333)
T ss_dssp ECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCC
T ss_pred eCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCC
Confidence 45677899999987 46667766666 689999988776442222 1234788999999988776654 3
Q ss_pred CcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEE-EEeeCCCeEEEEEccc-cceeeeee----ecCCeeecCeeee
Q 017314 236 GNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNII-LTSGRDNLHNLFDIRS-LEVCGSLR----ATGNRVASNWSRS 309 (373)
Q Consensus 236 g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~i~~~d~~~-~~~~~~~~----~~~~~~~~~~~~~ 309 (373)
+.|..+|..+++... +... ...+..++|+|+++.| ++.+.++.+.+||+.. ......+. ..... ......+
T Consensus 162 ~~l~~~~~~~~~~~~-~~~~-~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~-~~~~~~i 238 (333)
T 2dg1_A 162 GGVYYVSPDFRTVTP-IIQN-ISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTG-HEGPDSC 238 (333)
T ss_dssp EEEEEECTTSCCEEE-EEEE-ESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCS-SSEEEEE
T ss_pred ceEEEEeCCCCEEEE-eecC-CCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCC-CCCCCce
Confidence 556666666554432 2222 2457889999999855 4556678999999853 22221110 00000 0112346
Q ss_pred EECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCc------cEEEEEEcCCCCcEEEEeCC
Q 017314 310 CISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTA------PVLSCSWSGLGKPLASADKN 366 (373)
Q Consensus 310 ~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~------~V~~~~~s~~g~~l~s~s~d 366 (373)
+++++|.++++...++.|++||. +++.+..+..+.. .+.+++|+|||+.|+.++.+
T Consensus 239 ~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 239 CIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred EECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 78999998888888899999998 5666666654433 68999999998877655555
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.84 E-value=8.9e-18 Score=146.86 Aligned_cols=241 Identities=12% Similarity=0.222 Sum_probs=175.7
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecc------ccccceEEEEE-cCCCCEEEEEeC-CCcEEEE
Q 017314 86 AHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLY------GCLGSVLDLAI-THDNRSVIAASS-SNNLYVW 157 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~------~~~~~v~~~~~-~~~~~~l~s~s~-d~~i~iw 157 (373)
+|-....++++++++..+++.+.++.|++||.. ++....+. ++...+..+++ .++++.+++... ++.|++|
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 455678899999999999988899999999987 55444442 24456889999 466666665543 8899999
Q ss_pred EcCCCeeEEEee-cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec---CceeEEEEccCCCEEEEEe
Q 017314 158 DVNSGRVRHTLT-GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH---SNCNALAFSMDGQTIFSGH 233 (373)
Q Consensus 158 d~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~---~~~~~~~~~~~g~~l~sg~ 233 (373)
| .+++.+..+. .+...+..+++.+ +++.+++...++.|.+||.. +..+..+... ..+..++++|+|+.+++.+
T Consensus 106 d-~~g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 106 N-QYGQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp C-TTSCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred C-CCCcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 9 5666666664 3446688898887 56777887888999999964 4444444321 3478999999999888888
Q ss_pred CCCcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCCC-eEEEEEccccceeeeeeecCCeeecCeeeeEE
Q 017314 234 IDGNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRDN-LHNLFDIRSLEVCGSLRATGNRVASNWSRSCI 311 (373)
Q Consensus 234 ~dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (373)
.++.|++||.. ++.+..+.... ...+..++++++|+++++...++ .|.+||.. .+....+...... .....+++
T Consensus 183 ~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~-g~~~~~~~~~~~~--~~~~~i~~ 258 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD-GQLISALESKVKH--AQCFDVAL 258 (286)
T ss_dssp GGTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-SCEEEEEEESSCC--SCEEEEEE
T ss_pred CCCEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-CCEEEEEcccCCC--CcceeEEE
Confidence 89999999974 55555554331 24688999999999999988886 99999954 4444444432211 11224678
Q ss_pred CCCCcEEEEEeCCCcEEEEEccCc
Q 017314 312 SPDESYVAAGSADGSVYIWSISKA 335 (373)
Q Consensus 312 s~~~~~l~sgs~Dg~i~iwd~~~~ 335 (373)
+|+|+++++ +.|++|++|++...
T Consensus 259 ~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 259 MDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCCcEEEE-CCCCeEEEEEcccc
Confidence 999988877 56999999998654
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.83 E-value=1.1e-17 Score=150.28 Aligned_cols=254 Identities=11% Similarity=0.132 Sum_probs=172.0
Q ss_pred cEEEEEEcCCCCEEEEee---------CCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCC---C--cEE
Q 017314 90 GCASILFEYNSARLISGG---------QDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSS---N--NLY 155 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s---------~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d---~--~i~ 155 (373)
.+....+ ||++++... .++.|.+||+.+++... + ..+..++|+|||+.|+.++.+ + .|.
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~-l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~ 88 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF-I----ENATMPRISPDGKKIAFMRANEEKKVSEIW 88 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE-E----ESCEEEEECTTSSEEEEEEEETTTTEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE-c----ccCCCeEECCCCCEEEEEEeccCCCcceEE
Confidence 4556666 888776542 36789999998876533 3 567889999999999887754 2 488
Q ss_pred EEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCC---------------------------CcEEEEEccCCeee
Q 017314 156 VWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYD---------------------------RTLKVWDLHKGYCV 208 (373)
Q Consensus 156 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D---------------------------~~i~vwd~~~~~~~ 208 (373)
+||+.+++.......+. +..+.|+| +++.|+.++.+ ..|.+||+.++..+
T Consensus 89 ~~~~~~g~~~~l~~~~~--~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~ 165 (347)
T 2gop_A 89 VADLETLSSKKILEAKN--IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI 165 (347)
T ss_dssp EEETTTTEEEEEEEESE--EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE
T ss_pred EEECCCCceEEEEcCCC--ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE
Confidence 88998887665554443 88899988 56677766532 57899999988763
Q ss_pred eEEeecCceeEEEEccCCCEEEEEeCCC-------cEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCC---
Q 017314 209 NTIIFHSNCNALAFSMDGQTIFSGHIDG-------NLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRD--- 278 (373)
Q Consensus 209 ~~~~~~~~~~~~~~~~~g~~l~sg~~dg-------~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--- 278 (373)
..+... .+..++|+||| +++++..++ ..++|.+.+++. ..+..+ ..+..+ +|+|+.|+..+.+
T Consensus 166 ~~l~~~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~--~~~~~~--spdg~~l~~~~~~~~~ 238 (347)
T 2gop_A 166 EEFEKP-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK--VSFYAV--DSDGERILLYGKPEKK 238 (347)
T ss_dssp EEEEEE-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE--ESEEEE--EECSSCEEEEECCSSS
T ss_pred eeecCC-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCce-EEeccC--cceeeE--CCCCCEEEEEEccccC
Confidence 444434 77889999999 888776542 344554445543 344333 344444 8999988877644
Q ss_pred -----CeEEEEEccccceeeeeeecCCeeecCeee-eEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEE
Q 017314 279 -----NLHNLFDIRSLEVCGSLRATGNRVASNWSR-SCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCS 352 (373)
Q Consensus 279 -----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~ 352 (373)
..+.+|| +.+.......+... +.. ..++ |+ ++++++.++.++|| +.+++... +..+.+.|.+++
T Consensus 239 ~~~~~~~l~~~d--~~~~~~l~~~~~~~----~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~ 308 (347)
T 2gop_A 239 YMSEHNKLYIYD--GKEVMGILDEVDRG----VGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWIMGFD 308 (347)
T ss_dssp CCCSSCEEEEEC--SSCEEESSTTCCSE----EEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEEEEEE
T ss_pred CccccceEEEEC--CCceEeccccCCcc----cCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeEEeee
Confidence 3567777 33322211111111 222 5678 88 99999999999999 88666544 444577899999
Q ss_pred EcCCCCcEEEEeCCCeE-EEc
Q 017314 353 WSGLGKPLASADKNGVV-CVW 372 (373)
Q Consensus 353 ~s~~g~~l~s~s~dg~i-~iW 372 (373)
|+| .++++++.++.. .||
T Consensus 309 ~s~--~~~~~~~~~~~~~~l~ 327 (347)
T 2gop_A 309 VDE--IVVYLKETATRLRELF 327 (347)
T ss_dssp ESS--SEEEEEECSSSCCEEE
T ss_pred eeC--cEEEEEcCCCChHHhe
Confidence 999 677777777654 555
No 174
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.81 E-value=5.2e-17 Score=145.09 Aligned_cols=254 Identities=11% Similarity=0.118 Sum_probs=183.9
Q ss_pred CCCcEEEEeCCCCceeeeccc------cccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEe
Q 017314 108 QDKSIKLWDTNTGSLSSTLYG------CLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVS 181 (373)
Q Consensus 108 ~D~~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~ 181 (373)
.+++|.+||.++++....+.. .......+++. +++..++...++.|.+||..+++.+.++.. ......++++
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEe
Confidence 489999999999987665421 11335667764 344555566678999999999999888863 4567788887
Q ss_pred eCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC------ceeEEEEccCCCEEEEEe--CCCcEEEEECCCCeeeEEEe
Q 017314 182 KISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS------NCNALAFSMDGQTIFSGH--IDGNLRLWDIQTGKLLSEVA 253 (373)
Q Consensus 182 ~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~sg~--~dg~i~iwd~~~~~~~~~~~ 253 (373)
+. +...++...++.|.+||..+++....+.... ....+++ ++..|+.+. .++.|.++|+.+++.+..+.
T Consensus 93 ~~-g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~ 169 (328)
T 3dsm_A 93 SD-EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELT 169 (328)
T ss_dssp ET-TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEE
T ss_pred CC-CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEE
Confidence 74 4555555589999999999998887777665 5667777 345555554 48899999999999888776
Q ss_pred cccccceEEEEEcCCCCEEEEeeCC----------CeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeC
Q 017314 254 AHSLAAVTSISLSRSGNIILTSGRD----------NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSA 323 (373)
Q Consensus 254 ~~~~~~v~~~~~~~~~~~l~s~~~d----------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~ 323 (373)
.. .....+.++|+|++++++..+ +.+.++|..+.+....+...... ....++++|++++|..+..
T Consensus 170 ~g--~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~---~p~~la~~~d~~~lyv~~~ 244 (328)
T 3dsm_A 170 IG--IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGD---WPSEVQLNGTRDTLYWINN 244 (328)
T ss_dssp CS--SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTC---CCEEEEECTTSCEEEEESS
T ss_pred cC--CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCC---CceeEEEecCCCEEEEEcc
Confidence 54 345788999999988887655 78999999888776655432111 1234789999998887655
Q ss_pred CCcEEEEEccCceEEE--EeccCCccEEEEEEcCC-CCcEEEE----eCCCeEEEcC
Q 017314 324 DGSVYIWSISKADIVR--TLKEHTAPVLSCSWSGL-GKPLASA----DKNGVVCVWT 373 (373)
Q Consensus 324 Dg~i~iwd~~~~~~~~--~l~~h~~~V~~~~~s~~-g~~l~s~----s~dg~i~iW~ 373 (373)
.|.+||..+++... .+..+......++++|+ +...++. ..++.|.+|+
T Consensus 245 --~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 245 --DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp --SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEEC
T ss_pred --EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEEC
Confidence 89999998877532 12222456789999995 5555655 5688998885
No 175
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.80 E-value=2e-15 Score=132.27 Aligned_cols=277 Identities=9% Similarity=0.024 Sum_probs=192.6
Q ss_pred ecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeee-ccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCC
Q 017314 84 INAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSST-LYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSG 162 (373)
Q Consensus 84 ~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~ 162 (373)
+..+...+.+++++++|..+++...++.|.+||.. +..... +......+.++++++++..+++...++.|..||.. +
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-C
Confidence 44556788999999999988877778999999988 544322 22344678899999999988877778899999986 4
Q ss_pred eeE-EEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEee--cCceeEEEEccCCCEEEEEeCCCcEE
Q 017314 163 RVR-HTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF--HSNCNALAFSMDGQTIFSGHIDGNLR 239 (373)
Q Consensus 163 ~~~-~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~sg~~dg~i~ 239 (373)
+.. ..+......+..+.+.+ ++...++...++.|..||. ++........ ...+..+++.++|...++...++.|.
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~ 165 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIG 165 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEE
T ss_pred cEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEE
Confidence 332 22223455678888876 5667777777889999998 5543322111 23478899999998887777788999
Q ss_pred EEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEE
Q 017314 240 LWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVA 319 (373)
Q Consensus 240 iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~ 319 (373)
.||. +++............+..++++++++++++...++.+..||. +.+.. .+.... .......++++++|.+.+
T Consensus 166 ~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~--~~~~~~~i~~~~~g~l~v 240 (299)
T 2z2n_A 166 RITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEIT-EFKIPT--PNARPHAITAGAGIDLWF 240 (299)
T ss_dssp EECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSS--TTCCEEEEEECSTTCEEE
T ss_pred EEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEE-EEECCC--CCCCceeEEECCCCCEEE
Confidence 9999 665543212222346889999999998888777889999998 54432 221111 011223467899999777
Q ss_pred EEeCCCcEEEEEccCceEEEE-eccCCccEEEEEEcCCCCcEEEEeCCCeEEE
Q 017314 320 AGSADGSVYIWSISKADIVRT-LKEHTAPVLSCSWSGLGKPLASADKNGVVCV 371 (373)
Q Consensus 320 sgs~Dg~i~iwd~~~~~~~~~-l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~i 371 (373)
+...++.|.+||. +++.... +..+...+.++++ ++|+..++.+.++.+++
T Consensus 241 ~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~ 291 (299)
T 2z2n_A 241 TEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKL 291 (299)
T ss_dssp EETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEE
T ss_pred eccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEE
Confidence 7767889999998 4543322 3445567899999 88887777665554443
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=1e-17 Score=152.87 Aligned_cols=254 Identities=13% Similarity=0.083 Sum_probs=171.1
Q ss_pred EEeCCCCceeeeccccccceEE-----EEEcCCCCEEEEEeC-CC--cEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCC
Q 017314 114 LWDTNTGSLSSTLYGCLGSVLD-----LAITHDNRSVIAASS-SN--NLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISS 185 (373)
Q Consensus 114 iwd~~~~~~~~~~~~~~~~v~~-----~~~~~~~~~l~s~s~-d~--~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 185 (373)
.+|..++.....+..+...... .+|+|||++|+.++. ++ .|.+||+.+++......+|...+....|+| ++
T Consensus 14 ~~~~~~g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~sp-dg 92 (388)
T 3pe7_A 14 YQDASTGAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSP-DD 92 (388)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECT-TS
T ss_pred EecCCCCcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcC-CC
Confidence 4566777777777766655555 789999999998887 66 488899999988877777776665667888 67
Q ss_pred CEEEEEeCCCcEEEEEccCCeeeeEEeecCc-ee--EEEEccCCCEEEEE----------------------eCCCcEEE
Q 017314 186 RHVVSAAYDRTLKVWDLHKGYCVNTIIFHSN-CN--ALAFSMDGQTIFSG----------------------HIDGNLRL 240 (373)
Q Consensus 186 ~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~-~~--~~~~~~~g~~l~sg----------------------~~dg~i~i 240 (373)
+.|+.++.++.|.+||+.++........+.. .. ...++|++..++.. ..+..|.+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 8899999999999999999876655554443 22 23458999988743 23467999
Q ss_pred EECCCCeeeEEEecccccceEEEEEcC-CCCEEEEeeCC------CeEEEEEccccceeeeeeecCCeeecCeeeeEECC
Q 017314 241 WDIQTGKLLSEVAAHSLAAVTSISLSR-SGNIILTSGRD------NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISP 313 (373)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 313 (373)
||+.+++... +..+. ..+..+.|+| +|+.|+.++.+ ..+.++|....+. ..+...... .......++|
T Consensus 173 ~d~~~g~~~~-l~~~~-~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~--~~~~~~~~sp 247 (388)
T 3pe7_A 173 VDLKTGESTV-ILQEN-QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEG--ESCTHEFWVP 247 (388)
T ss_dssp EETTTCCEEE-EEEES-SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTT--EEEEEEEECT
T ss_pred EECCCCceEE-eecCC-ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCC--cccccceECC
Confidence 9999886543 33333 5688999999 99988876653 3667777654432 222222110 0112356999
Q ss_pred CCcEEEEEeC-CC----cEEEEEccCceE--EEEeccCCcc---EEEEEEcCCCCcEEEE---------eCCCeEEEcC
Q 017314 314 DESYVAAGSA-DG----SVYIWSISKADI--VRTLKEHTAP---VLSCSWSGLGKPLASA---------DKNGVVCVWT 373 (373)
Q Consensus 314 ~~~~l~sgs~-Dg----~i~iwd~~~~~~--~~~l~~h~~~---V~~~~~s~~g~~l~s~---------s~dg~i~iW~ 373 (373)
||+.|+..+. ++ .|++||+.+++. +..+.++... ....+|||||+.|+.. +.+..|.+|+
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d 326 (388)
T 3pe7_A 248 DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFN 326 (388)
T ss_dssp TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEE
T ss_pred CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEe
Confidence 9997765443 22 399999998874 3333331111 1123799999988754 4466788874
No 177
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.80 E-value=8.1e-16 Score=146.46 Aligned_cols=278 Identities=14% Similarity=0.131 Sum_probs=197.3
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEEEeCC--CCceeeeccccccceEEEEEc----CCCCEEEEEeC-CCcEEEEEcCCC
Q 017314 90 GCASILFEYNSARLISGGQDKSIKLWDTN--TGSLSSTLYGCLGSVLDLAIT----HDNRSVIAASS-SNNLYVWDVNSG 162 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~--~~~~~~~~~~~~~~v~~~~~~----~~~~~l~s~s~-d~~i~iwd~~~~ 162 (373)
.+..+.|+|||+++++++.|+.|.+||+. +++.+..+..... ...++|+ |||++++++.. ++++.|+|..+.
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~ 276 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETL 276 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTC
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-CceeEEccccCCCCCEEEEEEccCCeEEEEECCCC
Confidence 56689999999999999999999999995 7777777665433 5689999 69998877665 589999999999
Q ss_pred eeEEEeecC----------CC-cEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeee--eEEeecCceeEEEEccCCCEE
Q 017314 163 RVRHTLTGH----------TD-KVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCV--NTIIFHSNCNALAFSMDGQTI 229 (373)
Q Consensus 163 ~~~~~~~~h----------~~-~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~--~~~~~~~~~~~~~~~~~g~~l 229 (373)
+++.++... .. .+..+..++....++++...+|.|.++|......+ ..+........+.|+|+|+++
T Consensus 277 ~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~ 356 (567)
T 1qks_A 277 EPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYF 356 (567)
T ss_dssp CEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEE
T ss_pred cEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEE
Confidence 888776532 12 56677777755666777778899999998765322 222233345678999999998
Q ss_pred EEEe-CCCcEEEEECCCCeeeEEEec-cc---ccceEEEEEcCCCC-EEEEee-CCCeEEEEEccc-------cceeeee
Q 017314 230 FSGH-IDGNLRLWDIQTGKLLSEVAA-HS---LAAVTSISLSRSGN-IILTSG-RDNLHNLFDIRS-------LEVCGSL 295 (373)
Q Consensus 230 ~sg~-~dg~i~iwd~~~~~~~~~~~~-~~---~~~v~~~~~~~~~~-~l~s~~-~d~~i~~~d~~~-------~~~~~~~ 295 (373)
+++. .++.|.++|+.+++++..+.. .. ......+ ++|++. ..+++. .++.|.++|..+ ++.+.++
T Consensus 357 ~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 357 ITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEE
T ss_pred EEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEE
Confidence 7655 578899999999998877654 21 1112222 578744 445553 468999999887 6677776
Q ss_pred eecCCeeecCeeeeEECCCCcEEEEEeC-------CCcEEEEEccCc-----e-EEEEec--------cCCccEEEEEEc
Q 017314 296 RATGNRVASNWSRSCISPDESYVAAGSA-------DGSVYIWSISKA-----D-IVRTLK--------EHTAPVLSCSWS 354 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~s~~~~~l~sgs~-------Dg~i~iwd~~~~-----~-~~~~l~--------~h~~~V~~~~~s 354 (373)
...+..- ..+.++|++++|.+... .++|.++|+.+. . .++.+. .....+..+.|+
T Consensus 436 ~~~g~g~----~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (567)
T 1qks_A 436 PALGGGS----LFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFN 511 (567)
T ss_dssp ECSCSCC----CCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEEC
T ss_pred ecCCCCC----EEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeEC
Confidence 6543221 11346899999888663 358999999876 2 123332 123468999999
Q ss_pred CCCCcEEEEe-----CCCeEEEcC
Q 017314 355 GLGKPLASAD-----KNGVVCVWT 373 (373)
Q Consensus 355 ~~g~~l~s~s-----~dg~i~iW~ 373 (373)
|+|+++..+- .++.|.|+|
T Consensus 512 ~~G~~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 512 KDGTEVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp TTSSEEEEEEECCTTSCCEEEEEE
T ss_pred CCCCEEEEEeecCCCCCCcEEEEE
Confidence 9999775542 367887753
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.80 E-value=1.6e-16 Score=141.85 Aligned_cols=254 Identities=11% Similarity=0.057 Sum_probs=180.8
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q 017314 90 GCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLT 169 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 169 (373)
....+.+. ++..+++...++.|.+||..+++.+.++.. ......++++++++..++...++.|.+||+.+++....+.
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 35667764 455566666789999999999998887743 4567889998898544444489999999999998877766
Q ss_pred cCC-----CcEEEEEEeeCCCCEEEEEe-CCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEeCC--------
Q 017314 170 GHT-----DKVCAVDVSKISSRHVVSAA-YDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGHID-------- 235 (373)
Q Consensus 170 ~h~-----~~v~~~~~~~~~~~~~~s~s-~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~d-------- 235 (373)
... .....+++ . .+..+++.. .+++|.++|+.++....++........++++|+|++++++..+
T Consensus 123 ~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp CTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred cCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEECCCccCCcccc
Confidence 433 13445555 2 344444443 4899999999999888887776667889999999977776554
Q ss_pred --CcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECC
Q 017314 236 --GNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISP 313 (373)
Q Consensus 236 --g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 313 (373)
+.|.++|..+++....+..........++++|+++.|..+.. .+.+||..+.+.......... ......++++|
T Consensus 201 ~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~--~~~p~gi~vdp 276 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFR--DTKYYGLTVNP 276 (328)
T ss_dssp CCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCC--SSCEEEEEECT
T ss_pred CCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCC--CCceEEEEEcC
Confidence 789999999998877775432246889999999998887765 788999887664321111100 11223467898
Q ss_pred -CCcEEEEE----eCCCcEEEEEccCceEEEEeccCCccEEEEEE
Q 017314 314 -DESYVAAG----SADGSVYIWSISKADIVRTLKEHTAPVLSCSW 353 (373)
Q Consensus 314 -~~~~l~sg----s~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~ 353 (373)
++.++++. ..++.|.+||.. ++.+..+.--..| ..++|
T Consensus 277 ~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~~P-~~~~~ 319 (328)
T 3dsm_A 277 NNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGIIP-GAFCW 319 (328)
T ss_dssp TTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEESE-EEEEE
T ss_pred CCCeEEEEcccccccCCEEEEECCC-CCEEEEEEeccCc-ceEEE
Confidence 56666676 678999999998 8888877532222 45555
No 179
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=1.7e-18 Score=171.48 Aligned_cols=236 Identities=11% Similarity=0.060 Sum_probs=157.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcE-----EEEEEeeCCCCEEEEEeCC---------CcE
Q 017314 132 SVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKV-----CAVDVSKISSRHVVSAAYD---------RTL 197 (373)
Q Consensus 132 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v-----~~~~~~~~~~~~~~s~s~D---------~~i 197 (373)
...+++|+||+.+++++ |++|++||+.+++....+.+|.... ..+.++| ++++++.++.+ +.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEccceEE
Confidence 35578999999888876 9999999999999888888886442 2367788 67888888876 556
Q ss_pred EEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEeccccc-----------------ce
Q 017314 198 KVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLA-----------------AV 260 (373)
Q Consensus 198 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~-----------------~v 260 (373)
.+||+.++.+.........+...+|||||+.|+.+ .|+.|++||+.+++..+........ ..
T Consensus 95 ~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~ 173 (740)
T 4a5s_A 95 DIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAY 173 (740)
T ss_dssp EEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSS
T ss_pred EEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCC
Confidence 69999998765432334558899999999999887 4789999999887754321111111 12
Q ss_pred EEEEEcCCCCEEEEeeCCC------------------------------------eEEEEEccc---cc--eeeeeeecC
Q 017314 261 TSISLSRSGNIILTSGRDN------------------------------------LHNLFDIRS---LE--VCGSLRATG 299 (373)
Q Consensus 261 ~~~~~~~~~~~l~s~~~d~------------------------------------~i~~~d~~~---~~--~~~~~~~~~ 299 (373)
.++.|||||+.|+..+.|. .+.+||+.+ .+ ....+....
T Consensus 174 ~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~ 253 (740)
T 4a5s_A 174 SALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPA 253 (740)
T ss_dssp BCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCH
T ss_pred cceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCc
Confidence 3589999999998875432 356666665 42 111121100
Q ss_pred C--eeecCeeeeEECCCCcEEEEEe----CCCcEEEEEccCce----EE--EEe--ccCCccEE-----EEEEcCCCCcE
Q 017314 300 N--RVASNWSRSCISPDESYVAAGS----ADGSVYIWSISKAD----IV--RTL--KEHTAPVL-----SCSWSGLGKPL 360 (373)
Q Consensus 300 ~--~~~~~~~~~~~s~~~~~l~sgs----~Dg~i~iwd~~~~~----~~--~~l--~~h~~~V~-----~~~~s~~g~~l 360 (373)
. ..........++|||++++... .+..|++||+.+++ +. ..+ .+|.+.|. ..+|||||+.|
T Consensus 254 ~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l 333 (740)
T 4a5s_A 254 SMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSF 333 (740)
T ss_dssp HHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEE
T ss_pred cCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEE
Confidence 0 0001123457899999766543 23479999999887 22 122 34655544 78999999987
Q ss_pred E-EEe-CCCeEEE
Q 017314 361 A-SAD-KNGVVCV 371 (373)
Q Consensus 361 ~-s~s-~dg~i~i 371 (373)
+ ..+ .+|.-+|
T Consensus 334 ~~~~s~~~G~~~l 346 (740)
T 4a5s_A 334 YKIISNEEGYRHI 346 (740)
T ss_dssp EEEEECTTSCEEE
T ss_pred EEEEEcCCCceEE
Confidence 7 665 4554443
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=2.1e-16 Score=138.87 Aligned_cols=232 Identities=12% Similarity=0.072 Sum_probs=166.8
Q ss_pred ccccccceEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC
Q 017314 126 LYGCLGSVLDLAITHDNR-SVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK 204 (373)
Q Consensus 126 ~~~~~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~ 204 (373)
+..+.....+++|+|+++ .++++..++.|.+||..++ ...+..+...+.++++++ +++++++...++.|.+||..+
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~ 99 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPG 99 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTT
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCC
Confidence 333445567899999998 6777888899999999887 566777778899999987 567777776779999999977
Q ss_pred CeeeeEEeec-----CceeEEEEccCCCEEEE----EeC-------------CCcEEEEECCCCeeeEEEecccccceEE
Q 017314 205 GYCVNTIIFH-----SNCNALAFSMDGQTIFS----GHI-------------DGNLRLWDIQTGKLLSEVAAHSLAAVTS 262 (373)
Q Consensus 205 ~~~~~~~~~~-----~~~~~~~~~~~g~~l~s----g~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~ 262 (373)
+......... ..++.++++|+|+++++ |+. .+.|..+|.. ++. ..+..+ ......
T Consensus 100 g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~-~~~~~~-~~~~~g 176 (296)
T 3e5z_A 100 GEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTL-SAPIRD-RVKPNG 176 (296)
T ss_dssp CCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCE-EEEECC-CSSEEE
T ss_pred CcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCE-EEeecC-CCCCcc
Confidence 7654332211 23567999999998887 331 3456666654 443 333333 256789
Q ss_pred EEEcCCCCEEEEeeCCCeEEEEEcc-ccce---eeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEE
Q 017314 263 ISLSRSGNIILTSGRDNLHNLFDIR-SLEV---CGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIV 338 (373)
Q Consensus 263 ~~~~~~~~~l~s~~~d~~i~~~d~~-~~~~---~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~ 338 (373)
++|+|+++.+++.+.++.+.+||+. .+.. ...+ ... ......++++++|.+.++. ++.|++|+.. ++.+
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~---~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~ 249 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVE---PGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDEL 249 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCS---SSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEE
T ss_pred EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCC---CCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEE
Confidence 9999999998777888999999986 3332 1122 111 1111236789999877766 7889999986 7788
Q ss_pred EEeccCCccEEEEEE-cCCCCcEEEEeCCCeEEE
Q 017314 339 RTLKEHTAPVLSCSW-SGLGKPLASADKNGVVCV 371 (373)
Q Consensus 339 ~~l~~h~~~V~~~~~-s~~g~~l~s~s~dg~i~i 371 (373)
..+..+.. +.+++| +|+++.|+.++.++..++
T Consensus 250 ~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 250 GRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp EEEECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred EEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 88887777 899999 689999998888876654
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.78 E-value=2.2e-17 Score=161.51 Aligned_cols=254 Identities=16% Similarity=0.060 Sum_probs=165.8
Q ss_pred eEEecCccCcEE---------EEEEc--CCCCE-EEEeeC-CCcEEEEeCC--C-Cceeeeccc-----cccceEEEEEc
Q 017314 81 KHKINAHEGGCA---------SILFE--YNSAR-LISGGQ-DKSIKLWDTN--T-GSLSSTLYG-----CLGSVLDLAIT 139 (373)
Q Consensus 81 ~~~~~~h~~~v~---------~~~~~--~~~~~-l~s~s~-D~~v~iwd~~--~-~~~~~~~~~-----~~~~v~~~~~~ 139 (373)
...+..|...+. ...|+ |||++ |+.++. +..|.+|++. + +. ...+.. |...+.+++|+
T Consensus 60 ~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 60 EESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp EEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEE
T ss_pred cceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEEC
Confidence 345566665555 55565 99998 765553 5667777765 2 33 344444 56778899999
Q ss_pred CCCCEEEEEeCC----------CcEEEEEcCC------CeeEEEee-cCCCcEEEEEEeeCCCCEEEEEeCCC-------
Q 017314 140 HDNRSVIAASSS----------NNLYVWDVNS------GRVRHTLT-GHTDKVCAVDVSKISSRHVVSAAYDR------- 195 (373)
Q Consensus 140 ~~~~~l~s~s~d----------~~i~iwd~~~------~~~~~~~~-~h~~~v~~~~~~~~~~~~~~s~s~D~------- 195 (373)
|||+.|++++.+ ..|++||+.+ ++.. .+. .+...+..+.|+| +++.|+.++.++
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~ 216 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEG 216 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTC
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCC
Confidence 999999998877 5899999988 6544 444 5567778888998 677888777553
Q ss_pred -cEEEEEcc-CC---eeeeEEeec-CceeEEEEccCCCEEEEEeCCC--cEEEEECCCCeeeEEEecccccc--------
Q 017314 196 -TLKVWDLH-KG---YCVNTIIFH-SNCNALAFSMDGQTIFSGHIDG--NLRLWDIQTGKLLSEVAAHSLAA-------- 259 (373)
Q Consensus 196 -~i~vwd~~-~~---~~~~~~~~~-~~~~~~~~~~~g~~l~sg~~dg--~i~iwd~~~~~~~~~~~~~~~~~-------- 259 (373)
.|.+||+. ++ ........+ ..+..++|+|||++++++..|+ .|.+||+.+++.......+. ..
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~-~~~~p~w~~~ 295 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREE-EFAGPLWTPG 295 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSS-BSSCCCCSTT
T ss_pred cEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccc-cccCcccccc
Confidence 79999998 56 333333332 4578899999999888888888 56666666665443222221 11
Q ss_pred eEEEEEcCCCCEEEEeeCCCeEEEE--EccccceeeeeeecCCeeecCeeee-EECCCCcEEEEEeCCC--cEEEEEccC
Q 017314 260 VTSISLSRSGNIILTSGRDNLHNLF--DIRSLEVCGSLRATGNRVASNWSRS-CISPDESYVAAGSADG--SVYIWSISK 334 (373)
Q Consensus 260 v~~~~~~~~~~~l~s~~~d~~i~~~--d~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~~l~sgs~Dg--~i~iwd~~~ 334 (373)
+..++|+|+++++++++. +..++| |+...+ ...+..+...+. .. .++++.-++++++.+. .|++||+.+
T Consensus 296 ~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~----~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~ 369 (662)
T 3azo_A 296 MRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWA----ATLTVSGTRAVGVAASPRTAYEVVELDTVT 369 (662)
T ss_dssp CCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEE----EEEEEETTEEEEEEEETTEEEEEEEEETTT
T ss_pred CceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEE----EEEecCCCEEEEEEcCCCCCCEEEEEECCC
Confidence 567899999999999998 999999 444433 344443332222 12 2333333445556664 455556667
Q ss_pred ceEEEEeccC
Q 017314 335 ADIVRTLKEH 344 (373)
Q Consensus 335 ~~~~~~l~~h 344 (373)
++.......|
T Consensus 370 g~~~~l~~~~ 379 (662)
T 3azo_A 370 GRARTIGARH 379 (662)
T ss_dssp CCEEEEESCC
T ss_pred CceEEeecCC
Confidence 6654433333
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=2.6e-16 Score=138.34 Aligned_cols=242 Identities=10% Similarity=0.056 Sum_probs=169.0
Q ss_pred EEecCccCcEEEEEEcCCCC-EEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 017314 82 HKINAHEGGCASILFEYNSA-RLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 160 (373)
..+..+.....+++|+++++ .++++..++.|..||..++ ...+..+...+.+++++++++++++...++.|.+||..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~ 98 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREP 98 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECST
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCC
Confidence 44555666778999999998 7888889999999999887 55566667788999999999988777777899999998
Q ss_pred CCeeEEEeecCC----CcEEEEEEeeCCCCEEEEEeC-----------------CCcEEEEEccCCeeeeEEeecCceeE
Q 017314 161 SGRVRHTLTGHT----DKVCAVDVSKISSRHVVSAAY-----------------DRTLKVWDLHKGYCVNTIIFHSNCNA 219 (373)
Q Consensus 161 ~~~~~~~~~~h~----~~v~~~~~~~~~~~~~~s~s~-----------------D~~i~vwd~~~~~~~~~~~~~~~~~~ 219 (373)
+++......... ..+..+++.+ ++++++|.+. .+.|..+|.. +............+.
T Consensus 99 ~g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~g 176 (296)
T 3e5z_A 99 GGEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNG 176 (296)
T ss_dssp TCCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEE
T ss_pred CCcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCcc
Confidence 887654432221 2345677877 5677776321 2345445544 433222222234688
Q ss_pred EEEccCCCEEEEEeCCCcEEEEECC-CCee---eEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeee
Q 017314 220 LAFSMDGQTIFSGHIDGNLRLWDIQ-TGKL---LSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSL 295 (373)
Q Consensus 220 ~~~~~~g~~l~sg~~dg~i~iwd~~-~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~ 295 (373)
++|+|+|+.+++.+.++.|.+||+. +++. ...+ ......+..++++++|+++++. ++.+.+||.. .+....+
T Consensus 177 i~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~ 252 (296)
T 3e5z_A 177 LAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRV 252 (296)
T ss_dssp EEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEE
T ss_pred EEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEE
Confidence 9999999999878888999999997 5544 2333 2223456789999999987777 7889999986 5555555
Q ss_pred eecCCeeecCeeeeEE-CCCCcEEEEEeCCCcEEEEEccCceE
Q 017314 296 RATGNRVASNWSRSCI-SPDESYVAAGSADGSVYIWSISKADI 337 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~-s~~~~~l~sgs~Dg~i~iwd~~~~~~ 337 (373)
..+.. . ..++| +|+++.|++++.++ +.-++..+.++
T Consensus 253 ~~~~~-~----~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~~ 289 (296)
T 3e5z_A 253 LTPQT-T----SNLCFGGPEGRTLYMTVSTE-FWSIETNVRGL 289 (296)
T ss_dssp ECSSC-C----CEEEEESTTSCEEEEEETTE-EEEEECSCCBC
T ss_pred ECCCC-c----eeEEEECCCCCEEEEEcCCe-EEEEEcccccc
Confidence 44333 1 23567 68999998888775 44556655543
No 183
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.77 E-value=2.5e-17 Score=162.03 Aligned_cols=243 Identities=10% Similarity=0.049 Sum_probs=161.8
Q ss_pred CccCcEEEEEEcCCCCEEE-----EeeCCCcEEEEeCCCCceeeeccccccce--EEEEEcCCCCEEEEEeCCCc-----
Q 017314 86 AHEGGCASILFEYNSARLI-----SGGQDKSIKLWDTNTGSLSSTLYGCLGSV--LDLAITHDNRSVIAASSSNN----- 153 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~-----s~s~D~~v~iwd~~~~~~~~~~~~~~~~v--~~~~~~~~~~~l~s~s~d~~----- 153 (373)
+|...+.++.|||||++|| +|+.+.+|++||+.+++... ..+...+ ..++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 4666789999999999998 66667899999999987651 1122222 57899999999999998876
Q ss_pred --------EEEEEcCCCe----eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCC----cEEEEEccCCeeeeEEeec-Cc
Q 017314 154 --------LYVWDVNSGR----VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDR----TLKVWDLHKGYCVNTIIFH-SN 216 (373)
Q Consensus 154 --------i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~----~i~vwd~~~~~~~~~~~~~-~~ 216 (373)
|++|++.+++ ++.....|...+..+.++| ++++++.++.++ .|.+||..++.. ..+..+ ..
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~ 273 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGA 273 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSC
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCc
Confidence 9999998875 3334445666788899998 456676666555 667776655543 333333 33
Q ss_pred eeEEEEccCCCEEEEEe---CCCcEEEEECCCCee--eEEEeccc-ccceEEEEEcCCCCEEEEeeCCCeEEEEEcc-cc
Q 017314 217 CNALAFSMDGQTIFSGH---IDGNLRLWDIQTGKL--LSEVAAHS-LAAVTSISLSRSGNIILTSGRDNLHNLFDIR-SL 289 (373)
Q Consensus 217 ~~~~~~~~~g~~l~sg~---~dg~i~iwd~~~~~~--~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~-~~ 289 (373)
.....+ ++|.+++.+. .++.|.+||+.+++. ...+..+. ...+..++++ ++.++++...|+..++|.+. .+
T Consensus 274 ~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 274 KYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp CEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred eEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 444444 6676434443 257899999987653 23444332 3567888888 67788888999988888665 23
Q ss_pred ceeeeeeecCCeeecCeeeeEECCCCcEEE----EEeCCCcEEEEEccCceE
Q 017314 290 EVCGSLRATGNRVASNWSRSCISPDESYVA----AGSADGSVYIWSISKADI 337 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~----sgs~Dg~i~iwd~~~~~~ 337 (373)
+....+..+.... .....++|++..++ +....++|++||+.+++.
T Consensus 352 ~~~~~l~~~~~~~---v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 352 KPVRTVQLPGVGA---ASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp CEEEECCCSSSSE---ECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CeeEEecCCCCeE---EEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 3333333221111 11234678887666 333457899999988764
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.77 E-value=2.9e-15 Score=133.76 Aligned_cols=244 Identities=10% Similarity=0.058 Sum_probs=166.8
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCC----CcEE
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSS----NNLY 155 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d----~~i~ 155 (373)
....+..+...+.+++|+++++.++++..++.|.+||..+++.......+...+.+++++++++++++...+ +.|.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 36 PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 345566677778999999999988888999999999998887655443456789999999999988877766 6899
Q ss_pred EEEcCCCeeEEEee--cCCCcEEEEEEeeCCCCEEEEEeC------CCcEEEEEccCCeeeeEEeecCceeEEEEccCCC
Q 017314 156 VWDVNSGRVRHTLT--GHTDKVCAVDVSKISSRHVVSAAY------DRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQ 227 (373)
Q Consensus 156 iwd~~~~~~~~~~~--~h~~~v~~~~~~~~~~~~~~s~s~------D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~ 227 (373)
+||..+++....+. .+...+..+.+.+ +++.+++... .+.|..+|..++...........++.++++|+|+
T Consensus 116 ~~d~~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~ 194 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTAYCIDDMVFDS-KGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEK 194 (333)
T ss_dssp EECTTSCSCEEEECSSSSCCCEEEEEECT-TSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSS
T ss_pred EEeCCCCEEEEEEccCccCCcccceEECC-CCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCC
Confidence 99998877654443 2445688888887 4666666543 2455556655544333222334578899999998
Q ss_pred EEE-EEeCCCcEEEEECCC-CeeeEEEe------cccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecC
Q 017314 228 TIF-SGHIDGNLRLWDIQT-GKLLSEVA------AHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATG 299 (373)
Q Consensus 228 ~l~-sg~~dg~i~iwd~~~-~~~~~~~~------~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~ 299 (373)
.|+ +.+.++.|.+||+.+ +..+..+. ......+..++++++|+++++...++.+.+||.. .+....+....
T Consensus 195 ~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~ 273 (333)
T 2dg1_A 195 VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPG 273 (333)
T ss_dssp EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTT
T ss_pred EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCC
Confidence 665 455678999999964 33322111 1111367889999999998888888999999984 44444443322
Q ss_pred Ce--eecCeeeeEECCCCcEEEEEeCCC
Q 017314 300 NR--VASNWSRSCISPDESYVAAGSADG 325 (373)
Q Consensus 300 ~~--~~~~~~~~~~s~~~~~l~sgs~Dg 325 (373)
.. .......++++||+..|+.++.++
T Consensus 274 ~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 274 RDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp GGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred CccccccCcceEEECCCCCEEEEEeCcc
Confidence 10 000123467889987776655553
No 185
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.77 E-value=3.4e-15 Score=142.15 Aligned_cols=264 Identities=11% Similarity=0.025 Sum_probs=188.8
Q ss_pred CCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC--CCeeEEEeecCCCcE
Q 017314 98 YNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN--SGRVRHTLTGHTDKV 175 (373)
Q Consensus 98 ~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~--~~~~~~~~~~h~~~v 175 (373)
+.+..+++...+++|.++|..+++.+..+... ..+..+.|+||++++++++.|+.|.+||+. +++.+..+.... ..
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g-~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EA 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECS-SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCC-CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CC
Confidence 44557788888999999999999888777643 346689999999999999999999999995 777777776543 35
Q ss_pred EEEEEee---CCCCEEEEE-eCCCcEEEEEccCCeeeeEEeec------------CceeEEEEccCCCEEE-EEeCCCcE
Q 017314 176 CAVDVSK---ISSRHVVSA-AYDRTLKVWDLHKGYCVNTIIFH------------SNCNALAFSMDGQTIF-SGHIDGNL 238 (373)
Q Consensus 176 ~~~~~~~---~~~~~~~s~-s~D~~i~vwd~~~~~~~~~~~~~------------~~~~~~~~~~~g~~l~-sg~~dg~i 238 (373)
..+.+++ .++++++.+ ..++++.++|..+.+.+.++... ..+..+..++++..++ +...+|.|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 6788984 356666554 56799999999998887776532 1356788888766544 55667999
Q ss_pred EEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEee-CCCeEEEEEccccceeeeeee-cCCeeecCeeeeEECCCCc
Q 017314 239 RLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSG-RDNLHNLFDIRSLEVCGSLRA-TGNRVASNWSRSCISPDES 316 (373)
Q Consensus 239 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~~~ 316 (373)
.++|..+.+.+.............+.|+|++++++++. .++.+.++|+.+.+....+.. ...+...... ..++|++.
T Consensus 323 ~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~-~~~~p~~g 401 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA-NFVHPTFG 401 (567)
T ss_dssp EEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCE-EEEETTTE
T ss_pred EEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccce-eeECCCCC
Confidence 99999775433322222224567889999999876654 678999999999887666543 2222211111 12578754
Q ss_pred E-EEEEe-CCCcEEEEEccC-------ceEEEEeccCCccEEEEEEcCCCCcEEEEe
Q 017314 317 Y-VAAGS-ADGSVYIWSISK-------ADIVRTLKEHTAPVLSCSWSGLGKPLASAD 364 (373)
Q Consensus 317 ~-l~sgs-~Dg~i~iwd~~~-------~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s 364 (373)
. .+++. .+++|.++|..+ .+.++++......-.-+..+|++++|....
T Consensus 402 ~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 402 PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEEC
T ss_pred cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEec
Confidence 4 44553 568999999987 677888775543334577899999887654
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.77 E-value=3.1e-16 Score=154.62 Aligned_cols=244 Identities=13% Similarity=0.071 Sum_probs=168.3
Q ss_pred ccCcEEEEEEcCCCCEEEEeeCCC-----cEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCc--------
Q 017314 87 HEGGCASILFEYNSARLISGGQDK-----SIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNN-------- 153 (373)
Q Consensus 87 h~~~v~~~~~~~~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~-------- 153 (373)
|...+..++|||||++|+.++.++ .|++||+.+++.......+ ..+.+++|+|||+.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCccccccccc
Confidence 445688999999999998776543 8999999999876532222 23667899999999999988876
Q ss_pred --------EEEEEcCCCee--EEEee--cCCCcEEEEEEeeCCCCEEEEEeC-----CCcEEEEEccC------Ce-eee
Q 017314 154 --------LYVWDVNSGRV--RHTLT--GHTDKVCAVDVSKISSRHVVSAAY-----DRTLKVWDLHK------GY-CVN 209 (373)
Q Consensus 154 --------i~iwd~~~~~~--~~~~~--~h~~~v~~~~~~~~~~~~~~s~s~-----D~~i~vwd~~~------~~-~~~ 209 (373)
|++|++.+++. ...+. .|...+..+.++| ++++++.++. +..|.+||+.+ +. ...
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 99999988752 22233 3556678888988 5667766554 67899999986 43 344
Q ss_pred EEeecCceeEEEEccCCCEEEEEeCC----CcEEEEECCCCe--eeEEEecccc-cceEEEEEcCCCCEEEEeeCCCe--
Q 017314 210 TIIFHSNCNALAFSMDGQTIFSGHID----GNLRLWDIQTGK--LLSEVAAHSL-AAVTSISLSRSGNIILTSGRDNL-- 280 (373)
Q Consensus 210 ~~~~~~~~~~~~~~~~g~~l~sg~~d----g~i~iwd~~~~~--~~~~~~~~~~-~~v~~~~~~~~~~~l~s~~~d~~-- 280 (373)
.+..+.......|+|+|..|+..+.+ +.|.+||+.++. ....+..+.. ..+..+.+++++.++++...|+.
T Consensus 281 ~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 281 KLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp EEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred EeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 44444333334588999988766553 359999998764 2345555542 36888999988888888888885
Q ss_pred EEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEE-EEe---CCCcEEEEEccCce
Q 017314 281 HNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVA-AGS---ADGSVYIWSISKAD 336 (373)
Q Consensus 281 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-sgs---~Dg~i~iwd~~~~~ 336 (373)
+.+||+.+++....+..+...+ ....++|++..++ +.+ ..++|++||+.+++
T Consensus 361 l~~~~~~~g~~~~~l~~~~~~v----~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 361 LQLHDLATGALLKIFPLEVGSV----VGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTTCCEEEEECCCSSEE----EEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCCCCEEEecCCCCceE----EEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 4556665555545554432222 2345678887555 322 35789999998876
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.76 E-value=1e-15 Score=132.96 Aligned_cols=238 Identities=13% Similarity=0.107 Sum_probs=179.3
Q ss_pred CCCEEEEeeCCCcEEEEeCCCCceeeeccccc-cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC-CcEE
Q 017314 99 NSARLISGGQDKSIKLWDTNTGSLSSTLYGCL-GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHT-DKVC 176 (373)
Q Consensus 99 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~-~~v~ 176 (373)
.++.|++++.|+.|.+||.++|+.+-.+..+. ..+.+++++|+|+.++ +.++.|+.||. +++.+..+..+. ..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcccc
Confidence 46789999999999999999999988887665 4688999999999888 56788999999 899888888753 4677
Q ss_pred EEEEeeCCCCEEEEEeC-CCcEEEEEccCCeeeeEEeecC-------ceeEEEEccCCCEEEEEeCCCcEEEEECCCCee
Q 017314 177 AVDVSKISSRHVVSAAY-DRTLKVWDLHKGYCVNTIIFHS-------NCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKL 248 (373)
Q Consensus 177 ~~~~~~~~~~~~~s~s~-D~~i~vwd~~~~~~~~~~~~~~-------~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~ 248 (373)
++.+.+ +++.+++.+. ++.|..+|. .|+.+.++.... ....+++.++|+++++...++.|..||.. |+.
T Consensus 81 ~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 81 TARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred ccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 777766 6788888777 777777775 666666654321 23456788999999999999999999998 998
Q ss_pred eEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCe--eecCeeeeEECCCCcEEEEEeCC--
Q 017314 249 LSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNR--VASNWSRSCISPDESYVAAGSAD-- 324 (373)
Q Consensus 249 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~l~sgs~D-- 324 (373)
+.++... ....++...++++++++++.++.+..+|..+++.+-++...... ........+..++|.++++.+..
T Consensus 158 ~w~~~~~--~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~ 235 (276)
T 3no2_A 158 LNSVKLS--GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHD 235 (276)
T ss_dssp EEEEECS--SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTC
T ss_pred EEEEECC--CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCcc
Confidence 8888764 34566788899999999998889999999988887776533211 01112234567889888877421
Q ss_pred ------CcEEEEEc-cCceEEEEeccC
Q 017314 325 ------GSVYIWSI-SKADIVRTLKEH 344 (373)
Q Consensus 325 ------g~i~iwd~-~~~~~~~~l~~h 344 (373)
+..+++.+ .+++.+-++..+
T Consensus 236 ~~~~~~~~~~~~~~~~~g~~~W~~~~~ 262 (276)
T 3no2_A 236 REAGKGKHPQLVEIDSEGKVVWQLNDK 262 (276)
T ss_dssp TTGGGSCCCSEEEECTTSBEEEEECCT
T ss_pred ccccccCCceEEEECCCCCEEEEecCc
Confidence 23456666 467776666543
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.75 E-value=1.1e-15 Score=150.76 Aligned_cols=239 Identities=11% Similarity=0.082 Sum_probs=162.7
Q ss_pred cccceEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCc-------
Q 017314 129 CLGSVLDLAITHDNRSVIAASSSN-----NLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRT------- 196 (373)
Q Consensus 129 ~~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~------- 196 (373)
+...+..++|||||++|+.++.++ +|++||+.+++.......+. .+..++|+| +++.|+.++.|+.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~~ 200 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTH-DGKGMFYNAYPQQDGKSDGT 200 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECT-TSSEEEEEECCCCSSCCSSS
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCc-ccceEEEEe-CCCEEEEEEECCcccccccc
Confidence 444678899999999988766543 89999999998765332222 256788988 6778888887766
Q ss_pred ---------EEEEEccCCeeeeEE--eec---CceeEEEEccCCCEEEEEeC-----CCcEEEEECCC------Ce-eeE
Q 017314 197 ---------LKVWDLHKGYCVNTI--IFH---SNCNALAFSMDGQTIFSGHI-----DGNLRLWDIQT------GK-LLS 250 (373)
Q Consensus 197 ---------i~vwd~~~~~~~~~~--~~~---~~~~~~~~~~~g~~l~sg~~-----dg~i~iwd~~~------~~-~~~ 250 (373)
|++|++.++...... ... .....+.|+|||++|+.++. +..|.+||+.+ +. ...
T Consensus 201 ~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 280 (710)
T 2xdw_A 201 ETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWV 280 (710)
T ss_dssp CCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCE
T ss_pred ccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceE
Confidence 999999877532222 211 12568999999999987664 56899999976 43 345
Q ss_pred EEecccccceEEEEEcCCCCEEEEeeCC----CeEEEEEccccce--eeeeeecCCeeecCeeeeEECCCCcEEEEEeCC
Q 017314 251 EVAAHSLAAVTSISLSRSGNIILTSGRD----NLHNLFDIRSLEV--CGSLRATGNRVASNWSRSCISPDESYVAAGSAD 324 (373)
Q Consensus 251 ~~~~~~~~~v~~~~~~~~~~~l~s~~~d----~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~D 324 (373)
.+..+. ..+.. .|+|+|+.|+..+.. ..+.+||+.+... ...+..+... ......++++++.++++...|
T Consensus 281 ~l~~~~-~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~lv~~~~~~ 356 (710)
T 2xdw_A 281 KLIDNF-EGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEK--DVLEWVACVRSNFLVLCYLHD 356 (710)
T ss_dssp EEECSS-SSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSS--CEEEEEEEETTTEEEEEEEET
T ss_pred EeeCCC-CcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCC--CeEEEEEEEcCCEEEEEEEEC
Confidence 555554 23333 478888877665543 3588899876531 2233333221 011224566788888999999
Q ss_pred Cc--EEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEE-e---CCCeEEEcC
Q 017314 325 GS--VYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASA-D---KNGVVCVWT 373 (373)
Q Consensus 325 g~--i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~-s---~dg~i~iW~ 373 (373)
+. |++|++.+++.+..+..+.+.|..++++|+++.|+.. + ..+.|.+|+
T Consensus 357 g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 411 (710)
T 2xdw_A 357 VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCD 411 (710)
T ss_dssp TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEE
T ss_pred CEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEE
Confidence 85 5666776788778888888889999999999866533 2 236677663
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.74 E-value=7.2e-17 Score=147.38 Aligned_cols=242 Identities=13% Similarity=0.021 Sum_probs=156.8
Q ss_pred EEeCCCCceeeeccccccc-----eEEEEEcCCCCEEEEEeCC---CcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCC
Q 017314 114 LWDTNTGSLSSTLYGCLGS-----VLDLAITHDNRSVIAASSS---NNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISS 185 (373)
Q Consensus 114 iwd~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~l~s~s~d---~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 185 (373)
..|..++..+..+..+... +.+++|+|||++|+.+... ..|.+||+.+++......++......+.|+| ++
T Consensus 14 ~~d~~~g~~~~~l~~~~~~~~~~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp-dg 92 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDIICHRNYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST-DE 92 (396)
T ss_dssp EECTTTCCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT-TS
T ss_pred eecCCCCcceEEEecCCCCccceeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC-CC
Confidence 3466676665555544332 6678899999998877543 3688999998876554443333233356777 67
Q ss_pred CEEEEEeCCCcEEEEEccCCeeeeEEeecCc-eeE-------------------EEEccCCCEEEEE-----eCCCcEEE
Q 017314 186 RHVVSAAYDRTLKVWDLHKGYCVNTIIFHSN-CNA-------------------LAFSMDGQTIFSG-----HIDGNLRL 240 (373)
Q Consensus 186 ~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~-~~~-------------------~~~~~~g~~l~sg-----~~dg~i~i 240 (373)
+.|+.++.++.|.+||+.++........+.. ... +.++|+++.++.+ ..+..|.+
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~ 172 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIK 172 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEE
Confidence 8899999999999999988865544432322 111 2457777766543 35668999
Q ss_pred EECCCCeeeEEEecccccceEEEEEcC-CCCEEEEeeCC------CeEEEEEccccceeeeeeecCCeeecCeeeeEECC
Q 017314 241 WDIQTGKLLSEVAAHSLAAVTSISLSR-SGNIILTSGRD------NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISP 313 (373)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 313 (373)
||+.+++..... .+ ...+..+.|+| +++.|+..+.+ ..+.+||+...+.. .+...... .......++|
T Consensus 173 ~d~~~g~~~~~~-~~-~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~--~~~~~~~~sp 247 (396)
T 3c5m_A 173 VDIETGELEVIH-QD-TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEG--ESCTHEFWIP 247 (396)
T ss_dssp EETTTCCEEEEE-EE-SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTT--EEEEEEEECT
T ss_pred EECCCCcEEeec-cC-CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCC--ccccceEECC
Confidence 999988765443 33 25688999999 78866665443 35778887654322 22111100 1123357899
Q ss_pred CCcEEEEEeCC-----CcEEEEEccCceEEEEeccCCccEEEEEEcC-CCCcEEEEe
Q 017314 314 DESYVAAGSAD-----GSVYIWSISKADIVRTLKEHTAPVLSCSWSG-LGKPLASAD 364 (373)
Q Consensus 314 ~~~~l~sgs~D-----g~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~-~g~~l~s~s 364 (373)
||++|+.++.+ +.|++||+.+++...... ..+ .. +.|+| ||++|++++
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~ 301 (396)
T 3c5m_A 248 DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDG 301 (396)
T ss_dssp TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEE
T ss_pred CCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEec
Confidence 99988777654 449999998876543322 111 23 89999 999888765
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.74 E-value=2.3e-15 Score=130.85 Aligned_cols=213 Identities=12% Similarity=0.095 Sum_probs=168.0
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCC-CcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec--Cce
Q 017314 141 DNRSVIAASSSNNLYVWDVNSGRVRHTLTGHT-DKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH--SNC 217 (373)
Q Consensus 141 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~--~~~ 217 (373)
.++.|++++.++.|++||.++|+.+..+..+. ..+..+.+.| ++++++ +.++.|..||. +++.+..+..+ ..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~ 79 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEM 79 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccc
Confidence 46789999999999999999999999998776 4677888877 567777 45788999999 78888877764 357
Q ss_pred eEEEEccCCCEEEEEeC-CCcEEEEECCCCeeeEEEeccc-----ccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce
Q 017314 218 NALAFSMDGQTIFSGHI-DGNLRLWDIQTGKLLSEVAAHS-----LAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV 291 (373)
Q Consensus 218 ~~~~~~~~g~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~ 291 (373)
.++.+.|+|+++++.+. ++.|..+|. +|+.+.++.... ......+.+.++|+++++...++.+..||.. ++.
T Consensus 80 ~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~ 157 (276)
T 3no2_A 80 QTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQL 157 (276)
T ss_dssp EEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred cccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCE
Confidence 78899999999999887 778888885 777777664321 1234556789999999999999999999987 777
Q ss_pred eeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCC------ccEEEEEEcCCCCcEEEEe
Q 017314 292 CGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHT------APVLSCSWSGLGKPLASAD 364 (373)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~------~~V~~~~~s~~g~~l~s~s 364 (373)
+-++....... ...+.++|.++++++.+++|..+|..+|+.+-.+..+. ..+..++..++|..+++.+
T Consensus 158 ~w~~~~~~~~~-----~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 158 LNSVKLSGTPF-----SSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEEECSSCCC-----EEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEECCCCcc-----ceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 76665432221 24567899999999999999999999999988876432 2278889999998887763
No 191
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.73 E-value=2.6e-15 Score=134.71 Aligned_cols=235 Identities=13% Similarity=0.118 Sum_probs=156.5
Q ss_pred CcEEEEEEcCCCCEEEEeeCC---C--cEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCC------------
Q 017314 89 GGCASILFEYNSARLISGGQD---K--SIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSS------------ 151 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D---~--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d------------ 151 (373)
..+..+.|+|||++|+.++.+ + .|.+||+.+++........ . +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 457889999999999988754 2 3788888887665444333 3 8899999999998887743
Q ss_pred ---------------CcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCC-------cEEEEEccCCeeee
Q 017314 152 ---------------NNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDR-------TLKVWDLHKGYCVN 209 (373)
Q Consensus 152 ---------------~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~-------~i~vwd~~~~~~~~ 209 (373)
..|++||+.+++.+..+.. . .+..+.|+| ++ .+++++.+. ...+|.+.++...
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~- 211 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE- 211 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccEEEeCCCceE-
Confidence 5799999999887455554 3 777888987 45 777776552 4455555455433
Q ss_pred EEeecCceeEEEEccCCCEEEEEeCC--------CcEEEEECCCCeeeEEEecccccceEE-EEEcCCCCEEEEeeCCCe
Q 017314 210 TIIFHSNCNALAFSMDGQTIFSGHID--------GNLRLWDIQTGKLLSEVAAHSLAAVTS-ISLSRSGNIILTSGRDNL 280 (373)
Q Consensus 210 ~~~~~~~~~~~~~~~~g~~l~sg~~d--------g~i~iwd~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~d~~ 280 (373)
.+..+..+ ..++|||++|+.++.+ ..|.+|| +++. ..+.......+.. +.|+ ++ ++++++.++.
T Consensus 212 ~l~~~~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~ 284 (347)
T 2gop_A 212 KMFEKVSF--YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS 284 (347)
T ss_dssp EEEEEESE--EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE-EEEEEEETTE
T ss_pred EeccCcce--eeECCCCCEEEEEEccccCCccccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc-EEEEEecCCc
Confidence 33323223 3349999998877654 3688888 5544 3333333356775 8999 88 8999999999
Q ss_pred EEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcE-EEEEccCceEEEEeccCCcc
Q 017314 281 HNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSV-YIWSISKADIVRTLKEHTAP 347 (373)
Q Consensus 281 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i-~iwd~~~~~~~~~l~~h~~~ 347 (373)
+++| +..++. ..+...... +....++| .++++++.++.. .||.+. ++ ...+..|...
T Consensus 285 ~~l~-~~~g~~-~~~~~~~~~----v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~-~~~lt~~n~~ 342 (347)
T 2gop_A 285 VNLY-IWDGEI-KPIAKGRHW----IMGFDVDE--IVVYLKETATRLRELFTWD-GE-EKQLTDYNDP 342 (347)
T ss_dssp EEEE-EESSSE-EEEECSSSE----EEEEEESS--SEEEEEECSSSCCEEEEES-SS-EEECCCTTST
T ss_pred EEEE-EcCCce-EEEecCCCe----EEeeeeeC--cEEEEEcCCCChHHheEeC-Cc-EEEeccccHh
Confidence 9999 874433 222222222 23356788 677777777654 777776 54 4456666543
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=1.1e-15 Score=132.13 Aligned_cols=240 Identities=10% Similarity=0.030 Sum_probs=166.1
Q ss_pred cEEEEEEcCCCCEEE-EeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q 017314 90 GCASILFEYNSARLI-SGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 168 (373)
...+++++++|..++ +.+.++.|.+||..+.........+...+.+++++++++.+++.. ++.|.+||..+.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 567899999999777 557889999999866543322223345678899999998666555 889999998776543222
Q ss_pred ecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEee-cCceeEEEEccCCCEEEEEeCCCcEEEEECCCCe
Q 017314 169 TGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF-HSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGK 247 (373)
Q Consensus 169 ~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~ 247 (373)
......+..+++.+ +++.+++...++.|.+|+..+......... ...+..++++|+|+.+++...++.|.+||.....
T Consensus 104 ~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 104 FDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN 182 (270)
T ss_dssp CCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCC
T ss_pred cCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCc
Confidence 23335678888887 566777777789999997655433221111 1346789999999977777778899999988765
Q ss_pred eeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcE
Q 017314 248 LLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSV 327 (373)
Q Consensus 248 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i 327 (373)
.......+ ...+..++++++|.++++...++.+.+||........ ..... ......++++|+|.++++.+.++.|
T Consensus 183 ~~~~~~~~-~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~-~~~~~---~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 183 QVVLPFTD-ITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV-LPFTG---LNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp EEECCCSS-CCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE-CCCCS---CSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred eEeecccC-CCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee-eccCC---CCCceeEEECCCCCEEEEECCCCEE
Confidence 43322222 2568899999999888888888899999986543221 11111 1122346789999999999999999
Q ss_pred EEEEccCce
Q 017314 328 YIWSISKAD 336 (373)
Q Consensus 328 ~iwd~~~~~ 336 (373)
+++++...+
T Consensus 258 ~~~~~~~~~ 266 (270)
T 1rwi_B 258 VKLTSLEHH 266 (270)
T ss_dssp EEECCCGGG
T ss_pred EEEcCCCcc
Confidence 999987654
No 193
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.73 E-value=4.8e-14 Score=127.77 Aligned_cols=269 Identities=10% Similarity=0.015 Sum_probs=179.7
Q ss_pred EcCCCCEEEEeeC--CC---cEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe----------CCCcEEEEEcC
Q 017314 96 FEYNSARLISGGQ--DK---SIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS----------SSNNLYVWDVN 160 (373)
Q Consensus 96 ~~~~~~~l~s~s~--D~---~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s----------~d~~i~iwd~~ 160 (373)
..+++.+++.+.. .. +|.++|..+++.+..+.....+ .++++||++.++.+. .+++|.+||+.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~ 105 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPV 105 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECC
Confidence 3466776666553 22 8999999999988777654444 899999999998886 36789999999
Q ss_pred CCeeEEEeecC-------CCcEEEEEEeeCCCCEEEEEeC--CCcEEEEEccCCeeeeE-EeecCceeEEEEccCC-CEE
Q 017314 161 SGRVRHTLTGH-------TDKVCAVDVSKISSRHVVSAAY--DRTLKVWDLHKGYCVNT-IIFHSNCNALAFSMDG-QTI 229 (373)
Q Consensus 161 ~~~~~~~~~~h-------~~~v~~~~~~~~~~~~~~s~s~--D~~i~vwd~~~~~~~~~-~~~~~~~~~~~~~~~g-~~l 229 (373)
+.+.+..+.-- ......+.++| ++++++.+.. +++|.++| .+++.+.+ +.... ++.+.|++ ..+
T Consensus 106 t~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---~~~~~~~~~~~~ 180 (373)
T 2mad_H 106 TFLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---CYHIHPGAPSTF 180 (373)
T ss_pred CCcEEEEEECCCccccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc---eEEEEeCCCceE
Confidence 98877766422 12234677888 5777776663 58899999 99887766 54332 24455665 345
Q ss_pred EEEeCCCcEEEEECCCCeeeEEEe-----cccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccc--eeeeeeecC---
Q 017314 230 FSGHIDGNLRLWDIQTGKLLSEVA-----AHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLE--VCGSLRATG--- 299 (373)
Q Consensus 230 ~sg~~dg~i~iwd~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~--~~~~~~~~~--- 299 (373)
++.+.||.+.++|. +++...... ...........+.+++..++..+.++.+.+.|+.... ....+....
T Consensus 181 ~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~ 259 (373)
T 2mad_H 181 YLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGR 259 (373)
T ss_pred EEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcc
Confidence 66778999999999 877663322 1111111234556665544444467788888886432 222221110
Q ss_pred ---CeeecCeeeeEECCCCcEEEEEeC----------CCcEEEEEccCceEEEEeccCCccEEEEEEcCCCC-cEEEEe-
Q 017314 300 ---NRVASNWSRSCISPDESYVAAGSA----------DGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGK-PLASAD- 364 (373)
Q Consensus 300 ---~~~~~~~~~~~~s~~~~~l~sgs~----------Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~-~l~s~s- 364 (373)
......+....++|++..+..+.. ++.|.++|..+++.+..+.. .....+++|+|||+ .++++.
T Consensus 260 ~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~ 338 (373)
T 2mad_H 260 KADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSA 338 (373)
T ss_pred cccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcC
Confidence 001112233578999987776543 35799999999999888853 23578999999999 677776
Q ss_pred CCCeEEEcC
Q 017314 365 KNGVVCVWT 373 (373)
Q Consensus 365 ~dg~i~iW~ 373 (373)
.++.|.++|
T Consensus 339 ~~~~V~ViD 347 (373)
T 2mad_H 339 GTEVLHIYD 347 (373)
T ss_pred CCCeEEEEE
Confidence 589998875
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.73 E-value=1.1e-13 Score=121.26 Aligned_cols=273 Identities=10% Similarity=0.030 Sum_probs=188.1
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceee-eccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCee
Q 017314 86 AHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSS-TLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRV 164 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 164 (373)
.......+++++++|..+++...++.|.+||.. ++... .+......+.++++.++++.+++...++.|..||.. ++.
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~ 94 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF 94 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe
Confidence 345678899999999988887788999999988 55432 222334678899999999987777778899999988 554
Q ss_pred EE-EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEee---cCceeEEEEccCCCEEEEEeCCCcEEE
Q 017314 165 RH-TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF---HSNCNALAFSMDGQTIFSGHIDGNLRL 240 (373)
Q Consensus 165 ~~-~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~---~~~~~~~~~~~~g~~l~sg~~dg~i~i 240 (373)
.. .+......+..+.+.+ ++...++...++.|..+|.. +... .+.. ...+..+++.++|+..++...++.|..
T Consensus 95 ~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 95 TEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR 171 (300)
T ss_dssp EEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred EEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEE
Confidence 32 2232346678888876 56677776668899999987 5443 2222 234788999999997666666788999
Q ss_pred EECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEE
Q 017314 241 WDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAA 320 (373)
Q Consensus 241 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~s 320 (373)
+|. +++............+..+++++++++.++....+.+..||. ..+... +..... ......++++++|.+.++
T Consensus 172 ~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~--~~~~~~i~~d~~g~l~v~ 246 (300)
T 2qc5_A 172 ITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISE-YDIPTP--NARPHAITAGKNSEIWFT 246 (300)
T ss_dssp ECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSST--TCCEEEEEECSTTCEEEE
T ss_pred ECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEE-EECCCC--CCCceEEEECCCCCEEEe
Confidence 998 555443211122346889999999998888777788999987 333222 111110 111234678999997777
Q ss_pred EeCCCcEEEEEccCceEEE-EeccCCccEEEEEEcCCCCcEEEEeCCCeEEE
Q 017314 321 GSADGSVYIWSISKADIVR-TLKEHTAPVLSCSWSGLGKPLASADKNGVVCV 371 (373)
Q Consensus 321 gs~Dg~i~iwd~~~~~~~~-~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~i 371 (373)
...++.|..|+. +++... .+......+.+++++++|+..++.. . .|..
T Consensus 247 ~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~ 295 (300)
T 2qc5_A 247 EWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGK 295 (300)
T ss_dssp ETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEE
T ss_pred ccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEE
Confidence 777889999998 454432 2333445678999999998666655 4 4443
No 195
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.73 E-value=1.3e-15 Score=131.68 Aligned_cols=234 Identities=9% Similarity=-0.021 Sum_probs=161.6
Q ss_pred ceEEEEEcCCCCEEE-EEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeE
Q 017314 132 SVLDLAITHDNRSVI-AASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNT 210 (373)
Q Consensus 132 ~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~ 210 (373)
...+++++++++.++ +.+.++.|.+||..+.........+...+.++++.+ +++.+++.. ++.|.+||...+... .
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~~~-~ 101 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNNQT-V 101 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSCCE-E
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCceEe-e
Confidence 567899999998766 446788999999876553332233335667788876 456555555 889999998765432 2
Q ss_pred Eeec--CceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q 017314 211 IIFH--SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRS 288 (373)
Q Consensus 211 ~~~~--~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~ 288 (373)
+... ..+..++++|+|+.+++...++.|.+||..+......... ....+..++++++++++++...++.+.+||...
T Consensus 102 ~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 102 LPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFT-GLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp CCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCC-SCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred eecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccc-cCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 2211 4578999999999877777788999998765443322111 123578899999999888888888999999876
Q ss_pred cceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCe
Q 017314 289 LEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGV 368 (373)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~ 368 (373)
........... .....++++++|.++++...++.|++|+............+...+.+++++|+|+.+++...++.
T Consensus 181 ~~~~~~~~~~~----~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~ 256 (270)
T 1rwi_B 181 NNQVVLPFTDI----TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDR 256 (270)
T ss_dssp CCEEECCCSSC----CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTE
T ss_pred CceEeecccCC----CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCE
Confidence 54322111111 12234678999988888888899999998765443332234456899999999998888889999
Q ss_pred EEEcC
Q 017314 369 VCVWT 373 (373)
Q Consensus 369 i~iW~ 373 (373)
|++++
T Consensus 257 v~~~~ 261 (270)
T 1rwi_B 257 VVKLT 261 (270)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99874
No 196
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.69 E-value=3.6e-15 Score=146.62 Aligned_cols=236 Identities=11% Similarity=0.015 Sum_probs=155.6
Q ss_pred ccccceEEEEEcCCCCEEEE-----EeCCCcEEEEEcCCCeeEEEeecCCCcE--EEEEEeeCCCCEEEEEeCCCc----
Q 017314 128 GCLGSVLDLAITHDNRSVIA-----ASSSNNLYVWDVNSGRVRHTLTGHTDKV--CAVDVSKISSRHVVSAAYDRT---- 196 (373)
Q Consensus 128 ~~~~~v~~~~~~~~~~~l~s-----~s~d~~i~iwd~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~~~s~s~D~~---- 196 (373)
+|...+.+++|||||++|+. |+.+.+|++||+.+++.+. ..+...+ ..++|+| +++.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCCTTCCCEECT-TSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcccccceEEec-CCCEEEEEEecCCCCCc
Confidence 34557889999999999883 3334689999999987641 1122222 5678888 6778888888876
Q ss_pred ---------EEEEEccCCeeeeEEee----c-CceeEEEEccCCCEEEEEeCCC----cEEEEECCCCeeeEEEeccccc
Q 017314 197 ---------LKVWDLHKGYCVNTIIF----H-SNCNALAFSMDGQTIFSGHIDG----NLRLWDIQTGKLLSEVAAHSLA 258 (373)
Q Consensus 197 ---------i~vwd~~~~~~~~~~~~----~-~~~~~~~~~~~g~~l~sg~~dg----~i~iwd~~~~~~~~~~~~~~~~ 258 (373)
|++|++.++........ + ..+..+.++|||++|+.++.++ .|.+||..+++ ...+..+. .
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~-~ 272 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGV-G 272 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECS-S
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCC-C
Confidence 99999987753212211 2 2467899999999998877666 67777766554 34444444 2
Q ss_pred ceEEEEEcCCCCEEEEee---CCCeEEEEEccccce--eeeeeecC-CeeecCeeeeEECCCCcEEEEEeCCCcEEEEEc
Q 017314 259 AVTSISLSRSGNIILTSG---RDNLHNLFDIRSLEV--CGSLRATG-NRVASNWSRSCISPDESYVAAGSADGSVYIWSI 332 (373)
Q Consensus 259 ~v~~~~~~~~~~~l~s~~---~d~~i~~~d~~~~~~--~~~~~~~~-~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~ 332 (373)
.+....+ ++|.+++.+. .+..+.+||+.+.+. ...+..+. ... ....+++ ++.++++...|+..+||.+
T Consensus 273 ~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~---l~~~~~~-~~~lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 273 AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSAS---LLSVSIV-GGHLSLEYLKDATSEVRVA 347 (695)
T ss_dssp CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCE---EEEEEEE-TTEEEEEEEETTEEEEEEE
T ss_pred ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCe---EEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 3444445 5555555544 257899999876542 12222221 111 1223455 6788899999999888877
Q ss_pred c-CceEEEEeccC-CccEEEEEEcCCCCcEEEE----eCCCeEEEcC
Q 017314 333 S-KADIVRTLKEH-TAPVLSCSWSGLGKPLASA----DKNGVVCVWT 373 (373)
Q Consensus 333 ~-~~~~~~~l~~h-~~~V~~~~~s~~g~~l~s~----s~dg~i~iW~ 373 (373)
. ++.....+..+ .+.|..++++|+++.|+.. ...+.|.+|+
T Consensus 348 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d 394 (695)
T 2bkl_A 348 TLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTS 394 (695)
T ss_dssp ETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEE
T ss_pred eCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 5 46666667655 6778889999999877632 3346777774
No 197
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=8.6e-15 Score=130.68 Aligned_cols=202 Identities=9% Similarity=0.099 Sum_probs=153.0
Q ss_pred CccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc-eeeec---------cccccceEEEEEcC-CCCEEEEEe-CCCc
Q 017314 86 AHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGS-LSSTL---------YGCLGSVLDLAITH-DNRSVIAAS-SSNN 153 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~l~s~s-~d~~ 153 (373)
++-.....++++++|+.+++.+.++.|++||..... .+..+ .++......++++| ++..+++.+ .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 344578899999999999999999999999986542 33333 23445688999999 777777776 6899
Q ss_pred EEEEEcCCCeeEEEeec----------CCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec---CceeEE
Q 017314 154 LYVWDVNSGRVRHTLTG----------HTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH---SNCNAL 220 (373)
Q Consensus 154 i~iwd~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~---~~~~~~ 220 (373)
|++|| .+++.+..+.. +-.....+++++..+..+++...++.|++||..++..+..+... ..+..+
T Consensus 168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE
T ss_pred EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee
Confidence 99999 56776666642 22347889998754777788888999999999988887776432 346788
Q ss_pred EEcc------CCCEEEEEeCCCcEEEEECCCCeeeEEEec--ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccc
Q 017314 221 AFSM------DGQTIFSGHIDGNLRLWDIQTGKLLSEVAA--HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRS 288 (373)
Q Consensus 221 ~~~~------~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~ 288 (373)
+++| +|+..++...+..|++||..+++.+..+.. ........++++|+|.++++...++.|++|++..
T Consensus 247 ~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 247 SYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred eecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 8998 333333334456899999999998887741 2235689999999998888988999999998753
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.68 E-value=7.8e-14 Score=125.23 Aligned_cols=271 Identities=12% Similarity=0.080 Sum_probs=182.8
Q ss_pred EcCCCCEEEEeeC-----CCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe----------CCCcEEEEEcC
Q 017314 96 FEYNSARLISGGQ-----DKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS----------SSNNLYVWDVN 160 (373)
Q Consensus 96 ~~~~~~~l~s~s~-----D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s----------~d~~i~iwd~~ 160 (373)
..|++++++.... ++.|.+.|..+++.+..+.....+ . ++++||+++++.++ .+++|.+||..
T Consensus 40 ~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 40 PAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred cCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECC
Confidence 3577887777765 689999999999998888765555 4 99999999888775 36789999999
Q ss_pred CCeeEEEeecCC-------CcEEEEEEeeCCCCEEEEEeC--CCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEE
Q 017314 161 SGRVRHTLTGHT-------DKVCAVDVSKISSRHVVSAAY--DRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFS 231 (373)
Q Consensus 161 ~~~~~~~~~~h~-------~~v~~~~~~~~~~~~~~s~s~--D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s 231 (373)
+++.+.++.-.. .....+.++| ++++++.+.. +++|.++|+.+++.+.++.... + ...+......+++
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g-~-~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD-C-YHIFPTAPDTFFM 194 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-E-EEEEEEETTEEEE
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC-c-ceeecCCCceeEE
Confidence 999888775321 1334577887 5677766653 7899999999999888876543 2 2223234456778
Q ss_pred EeCCCcEEEEECCC-CeeeEEEeccc---ccce-EEEEEc-CCCCEEEEeeCCCeEEEEEccccc--eeeeeee------
Q 017314 232 GHIDGNLRLWDIQT-GKLLSEVAAHS---LAAV-TSISLS-RSGNIILTSGRDNLHNLFDIRSLE--VCGSLRA------ 297 (373)
Q Consensus 232 g~~dg~i~iwd~~~-~~~~~~~~~~~---~~~v-~~~~~~-~~~~~l~s~~~d~~i~~~d~~~~~--~~~~~~~------ 297 (373)
.+.||.+-+.++.+ ++......... ...+ ....|. ++|++++ .+.++.+.++|+.... ....+..
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~ 273 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAER 273 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHH
T ss_pred ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccc
Confidence 88888888888876 55432211110 0111 123553 6776555 4457899999986543 2222220
Q ss_pred cCCeeecCeeeeEECCCCcEEEEEeC----------CCcEEEEEccCceEEEEeccCCccEEEEEEcCCCC-cEEEE-eC
Q 017314 298 TGNRVASNWSRSCISPDESYVAAGSA----------DGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGK-PLASA-DK 365 (373)
Q Consensus 298 ~~~~~~~~~~~~~~s~~~~~l~sgs~----------Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~-~l~s~-s~ 365 (373)
........+..++++|++..+..... ...|.+.|+.+++.++.+.-- .++++++++||++ +|+++ ..
T Consensus 274 ~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~ 352 (386)
T 3sjl_D 274 ADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEKPLLYALSTG 352 (386)
T ss_dssp HTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSSCEEEEEETT
T ss_pred cccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCCeEEEEEcCC
Confidence 01112223344678898887766542 247999999999998887532 3678999999997 55554 55
Q ss_pred CCeEEEcC
Q 017314 366 NGVVCVWT 373 (373)
Q Consensus 366 dg~i~iW~ 373 (373)
++.|.++|
T Consensus 353 ~~~VsViD 360 (386)
T 3sjl_D 353 DKTLYIHD 360 (386)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEE
Confidence 88888764
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.68 E-value=1.6e-13 Score=121.12 Aligned_cols=239 Identities=13% Similarity=0.138 Sum_probs=160.9
Q ss_pred cCcEEEEEEcCCCCEEEE-------eeCCCcEEEEeCCCCceeeecc----ccccceEEEEEcCC-CCEEEEEeCCCcEE
Q 017314 88 EGGCASILFEYNSARLIS-------GGQDKSIKLWDTNTGSLSSTLY----GCLGSVLDLAITHD-NRSVIAASSSNNLY 155 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s-------~s~D~~v~iwd~~~~~~~~~~~----~~~~~v~~~~~~~~-~~~l~s~s~d~~i~ 155 (373)
-....+++|++++..+++ +..++.|.+||..+++...... ++...+.+++++++ ++++ .++..+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~-v~~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLF-VADMRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEE-EEETTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEE-EEECCCCEE
Confidence 345578999999988888 6788999999988876543221 24467889999999 6544 444455799
Q ss_pred EEEcCCCeeEEE-eec----CCCcEEEEEEeeCCCCEEEEEeCC---------------CcEEEEEccCCeeeeEEeecC
Q 017314 156 VWDVNSGRVRHT-LTG----HTDKVCAVDVSKISSRHVVSAAYD---------------RTLKVWDLHKGYCVNTIIFHS 215 (373)
Q Consensus 156 iwd~~~~~~~~~-~~~----h~~~v~~~~~~~~~~~~~~s~s~D---------------~~i~vwd~~~~~~~~~~~~~~ 215 (373)
+||.. ++.... ... ....+..+.+.+ +++..++...+ +.|..||.. +..........
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~ 172 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ 172 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC
Confidence 99998 765433 221 123467888877 46666666554 466677765 44433333334
Q ss_pred ceeEEEEc----cCCCEEEEE-eCCCcEEEEECC-CCee-----eEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEE
Q 017314 216 NCNALAFS----MDGQTIFSG-HIDGNLRLWDIQ-TGKL-----LSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLF 284 (373)
Q Consensus 216 ~~~~~~~~----~~g~~l~sg-~~dg~i~iwd~~-~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~ 284 (373)
..+.++++ |+|+.++.+ ..++.|.+||+. +++. ...+..+.......++++++|+++++...++.+.+|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 56789999 999766554 567899999986 4442 122222110357889999999999998888899999
Q ss_pred EccccceeeeeeecCCeeecCeeeeEECCCCcEE-EEEeCCCcEEEEEccC
Q 017314 285 DIRSLEVCGSLRATGNRVASNWSRSCISPDESYV-AAGSADGSVYIWSISK 334 (373)
Q Consensus 285 d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l-~sgs~Dg~i~iwd~~~ 334 (373)
|..+.+....+..+.. ....++++|+|.+| ++...++.|..|++..
T Consensus 253 d~~~g~~~~~~~~~~~----~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 253 GPDGGQPKMRIRCPFE----KPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CTTCBSCSEEEECSSS----CEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cCCCCcEeEEEeCCCC----CceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9876655444433322 22346789999955 4555678899999864
No 200
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.65 E-value=8e-14 Score=125.16 Aligned_cols=263 Identities=13% Similarity=0.091 Sum_probs=178.3
Q ss_pred eEEecCccCcEEEEEEcCCCCEEEEee----------CCCcEEEEeCCCCceeeeccccc-------cceEEEEEcCCCC
Q 017314 81 KHKINAHEGGCASILFEYNSARLISGG----------QDKSIKLWDTNTGSLSSTLYGCL-------GSVLDLAITHDNR 143 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~ 143 (373)
..++..-..+ . +.++|||++|+.++ .++.|.+||..+++....+.-.. .....++|+|||+
T Consensus 72 ~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk 149 (386)
T 3sjl_D 72 IGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGK 149 (386)
T ss_dssp EEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSS
T ss_pred EEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCC
Confidence 3444433344 3 99999999888776 36789999999998877664211 1345689999999
Q ss_pred EEEEEeC--CCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC-CeeeeEEeec-----C
Q 017314 144 SVIAASS--SNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK-GYCVNTIIFH-----S 215 (373)
Q Consensus 144 ~l~s~s~--d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~-~~~~~~~~~~-----~ 215 (373)
+++.+.. +++|.++|+.+++.+.++.... . ..+.|...+.+++.+.||++-+.++.. +....+.... .
T Consensus 150 ~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~ 225 (386)
T 3sjl_D 150 TLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDE 225 (386)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTS
T ss_pred EEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccc
Confidence 9988864 6899999999999988885321 1 122344566788899999999999976 5543222111 0
Q ss_pred ce-eEEEE-ccCCCEEEEEeCCCcEEEEECCCCe--eeEEEec---------ccccceEEEEEcCCCCEEEEeeC-----
Q 017314 216 NC-NALAF-SMDGQTIFSGHIDGNLRLWDIQTGK--LLSEVAA---------HSLAAVTSISLSRSGNIILTSGR----- 277 (373)
Q Consensus 216 ~~-~~~~~-~~~g~~l~sg~~dg~i~iwd~~~~~--~~~~~~~---------~~~~~v~~~~~~~~~~~l~s~~~----- 277 (373)
.+ +...| .++|++++ .+.+|+|.+.|+.++. .+..+.. ........++++++++.++....
T Consensus 226 ~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~ 304 (386)
T 3sjl_D 226 FLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEW 304 (386)
T ss_dssp CBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTT
T ss_pred cccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEecccccc
Confidence 11 12355 36786655 5568999999997653 3333320 00123345777899988777542
Q ss_pred -----CCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCc-EEEE-EeCCCcEEEEEccCceEEEEeccCCccEEE
Q 017314 278 -----DNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDES-YVAA-GSADGSVYIWSISKADIVRTLKEHTAPVLS 350 (373)
Q Consensus 278 -----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~s-gs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~ 350 (373)
.+.+-++|+.+.+.+..+..... ...+.++||++ +|++ ...++.|.++|..+++.++++..-..+ +.
T Consensus 305 ~hk~~~~~V~viD~~t~kv~~~i~vg~~-----~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p-~~ 378 (386)
T 3sjl_D 305 RHKTASRFVVVLDAKTGERLAKFEMGHE-----IDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHG-PQ 378 (386)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEEEE-----ECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSS-CC
T ss_pred ccCCCCCEEEEEECCCCeEEEEEECCCC-----cceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCC-ce
Confidence 35789999999998888764321 12367999996 5555 456899999999999999988643222 34
Q ss_pred EEEcCC
Q 017314 351 CSWSGL 356 (373)
Q Consensus 351 ~~~s~~ 356 (373)
+.+++|
T Consensus 379 l~~s~d 384 (386)
T 3sjl_D 379 VITTAD 384 (386)
T ss_dssp EEEECC
T ss_pred eEECCc
Confidence 666665
No 201
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.65 E-value=1.4e-12 Score=118.17 Aligned_cols=238 Identities=10% Similarity=-0.021 Sum_probs=165.8
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEeCCCCceeeecccc-------ccceEEEEEcCCCCEEEEEeC--CCc
Q 017314 93 SILFEYNSARLISGG----------QDKSIKLWDTNTGSLSSTLYGC-------LGSVLDLAITHDNRSVIAASS--SNN 153 (373)
Q Consensus 93 ~~~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~s~--d~~ 153 (373)
.+.|+|||++|+.+. .+++|.+||..+.+....+.-. ......++|+|||++|+.+.. +++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998886 3688999999988776655321 123457899999999998874 478
Q ss_pred EEEEEcCCCeeEEE-eecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe-----ec-Cc-eeEEEEccC
Q 017314 154 LYVWDVNSGRVRHT-LTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII-----FH-SN-CNALAFSMD 225 (373)
Q Consensus 154 i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~-----~~-~~-~~~~~~~~~ 225 (373)
|.++| .+++.+.. +... . ++.+.+.....+++.+.|+++.++|. ++....... .. .. .....+.++
T Consensus 150 v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~ 223 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANK 223 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEec
Confidence 99999 99988777 5422 1 23344555566778889999999999 776553221 11 11 122345666
Q ss_pred CCEEEEEeCCCcEEEEECCCCe--eeEEEecc---------cccceEEEEEcCCCCEEEEeeC----------CCeEEEE
Q 017314 226 GQTIFSGHIDGNLRLWDIQTGK--LLSEVAAH---------SLAAVTSISLSRSGNIILTSGR----------DNLHNLF 284 (373)
Q Consensus 226 g~~l~sg~~dg~i~iwd~~~~~--~~~~~~~~---------~~~~v~~~~~~~~~~~l~s~~~----------d~~i~~~ 284 (373)
+..++..+.++.+.+.|+.++. .+..+... .......+.++|+++.+..... ++.+.++
T Consensus 224 ~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VI 303 (373)
T 2mad_H 224 SGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSV 303 (373)
T ss_pred CCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEE
Confidence 6555444478899999997552 22222111 0122344788999987777543 3579999
Q ss_pred EccccceeeeeeecCCeeecCeeeeEECCCCc-EEEEEe-CCCcEEEEEccCceEEEEe
Q 017314 285 DIRSLEVCGSLRATGNRVASNWSRSCISPDES-YVAAGS-ADGSVYIWSISKADIVRTL 341 (373)
Q Consensus 285 d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~sgs-~Dg~i~iwd~~~~~~~~~l 341 (373)
|+.+.+.+.++...... ..+.++|||+ +++++. .++.|.++|..+++.++.+
T Consensus 304 D~~t~~vv~~i~~g~~p-----~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 304 TGLVGQTSSQISLGHDV-----DAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ECCCCEEEEEEECCCCc-----CeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 99999888887543322 2367899999 777776 5899999999999998874
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=3e-14 Score=141.13 Aligned_cols=242 Identities=12% Similarity=0.096 Sum_probs=158.3
Q ss_pred ccCcEEEEEEcCCCCEEEEeeCC-----CcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCc--------
Q 017314 87 HEGGCASILFEYNSARLISGGQD-----KSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNN-------- 153 (373)
Q Consensus 87 h~~~v~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~-------- 153 (373)
|...+..+.|||||++|+.++.+ .+|++||+.+++..... .+...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 44468899999999999887654 46999999998765431 11222357889999 99988887654
Q ss_pred ------EEEEEcCCCee--EEEee--cCCCcEEEEEEeeCCCCEEEEEeCC-----CcEEEEEccCC--eeeeEEeecCc
Q 017314 154 ------LYVWDVNSGRV--RHTLT--GHTDKVCAVDVSKISSRHVVSAAYD-----RTLKVWDLHKG--YCVNTIIFHSN 216 (373)
Q Consensus 154 ------i~iwd~~~~~~--~~~~~--~h~~~v~~~~~~~~~~~~~~s~s~D-----~~i~vwd~~~~--~~~~~~~~~~~ 216 (373)
|++|++.+++. ...+. .|...+..+.++| ++++++..+.+ ..|.+||+.++ .+...+..+..
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 89999987652 22333 3334578888987 56777766644 38999999876 31344443332
Q ss_pred -eeEEEEccCCCEEEEEeCC----CcEEEEECCCC-eeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEcc-cc
Q 017314 217 -CNALAFSMDGQTIFSGHID----GNLRLWDIQTG-KLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIR-SL 289 (373)
Q Consensus 217 -~~~~~~~~~g~~l~sg~~d----g~i~iwd~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~-~~ 289 (373)
.... ++|+|..|+..+.+ +.|.+||+.++ .....+..+....+..++++ ++.++++...|+..++|.+. .+
T Consensus 318 ~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g 395 (741)
T 1yr2_A 318 AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDG 395 (741)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTS
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 2333 45899988877654 45999999875 23344444444567777887 56678888889888777654 23
Q ss_pred ceeeeeeecCCeeecCeeeeEECCCCcEEE-E---EeCCCcEEEEEccCce
Q 017314 290 EVCGSLRATGNRVASNWSRSCISPDESYVA-A---GSADGSVYIWSISKAD 336 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~-s---gs~Dg~i~iwd~~~~~ 336 (373)
.....+...... ......++|++..|+ + ....++|++||+.+++
T Consensus 396 ~~~~~l~~~~~~---~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 396 KPAGAVSLPGIG---SASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp CEEEECBCSSSC---EEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CceeeccCCCCe---EEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 333333322111 112345678887555 2 2345789999998876
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.65 E-value=3.3e-14 Score=140.81 Aligned_cols=236 Identities=9% Similarity=0.036 Sum_probs=152.4
Q ss_pred cccceEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCc-------
Q 017314 129 CLGSVLDLAITHDNRSVIAASSS-----NNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRT------- 196 (373)
Q Consensus 129 ~~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~------- 196 (373)
+...+..++|||||++|+.++.+ .+|++||+.+++.+.. ..+...+..++|+| + +.|+.++.|+.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~~~ 237 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLG-N-DALLYSRFAEPKEGQAFQ 237 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEEST-T-SEEEEEECCCC-------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEEC-C-CEEEEEEecCcccccccc
Confidence 33467889999999998877654 4699999999986543 11222234677888 4 67777776654
Q ss_pred -------EEEEEccCCeeeeEE--eecC---ceeEEEEccCCCEEEEEeCCC-----cEEEEECCCC--eeeEEEecccc
Q 017314 197 -------LKVWDLHKGYCVNTI--IFHS---NCNALAFSMDGQTIFSGHIDG-----NLRLWDIQTG--KLLSEVAAHSL 257 (373)
Q Consensus 197 -------i~vwd~~~~~~~~~~--~~~~---~~~~~~~~~~g~~l~sg~~dg-----~i~iwd~~~~--~~~~~~~~~~~ 257 (373)
|++|++.++...... .... .+..+.|+|||++|+..+.++ .|.+||+.++ +....+..+..
T Consensus 238 ~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 317 (741)
T 1yr2_A 238 ALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK 317 (741)
T ss_dssp -CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS
T ss_pred cCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC
Confidence 889998776532122 2211 367899999999988776544 7999999877 31445554442
Q ss_pred cceEEEEEcCCCCEEEEeeCC----CeEEEEEccccc-eeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEc
Q 017314 258 AAVTSISLSRSGNIILTSGRD----NLHNLFDIRSLE-VCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSI 332 (373)
Q Consensus 258 ~~v~~~~~~~~~~~l~s~~~d----~~i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~ 332 (373)
.+... ++|+|+.|+..+.+ ..+.+||+.+.. ....+..+.... ...+.++ ++.++++...||..+||.+
T Consensus 318 -~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~---l~~~~~~-~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 318 -AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDN---LESVGIA-GNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp -SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSE---EEEEEEE-BTEEEEEEEETTEEEEEEE
T ss_pred -ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCe---EEEEEEE-CCEEEEEEEECCEEEEEEE
Confidence 33333 34888887776653 458899987642 222222222211 1123344 5678888999998888866
Q ss_pred c-CceEEEEecc-CCccEEEEEEcCCCCcEEEE----eCCCeEEEcC
Q 017314 333 S-KADIVRTLKE-HTAPVLSCSWSGLGKPLASA----DKNGVVCVWT 373 (373)
Q Consensus 333 ~-~~~~~~~l~~-h~~~V~~~~~s~~g~~l~s~----s~dg~i~iW~ 373 (373)
. ++.....+.. +.+.|..++++|+++.|+.. ...+.|.+|+
T Consensus 392 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 438 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALD 438 (741)
T ss_dssp ETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEE
T ss_pred eCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 5 4666666765 36778999999999876632 2346777763
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.65 E-value=2.3e-13 Score=120.09 Aligned_cols=238 Identities=10% Similarity=0.115 Sum_probs=158.3
Q ss_pred ccceEEEEEcCCCCEEEE-------EeCCCcEEEEEcCCCeeEEEee----cCCCcEEEEEEeeCCCCEEEEEeCCCcEE
Q 017314 130 LGSVLDLAITHDNRSVIA-------ASSSNNLYVWDVNSGRVRHTLT----GHTDKVCAVDVSKISSRHVVSAAYDRTLK 198 (373)
Q Consensus 130 ~~~v~~~~~~~~~~~l~s-------~s~d~~i~iwd~~~~~~~~~~~----~h~~~v~~~~~~~~~~~~~~s~s~D~~i~ 198 (373)
.....+++|+++++.+++ ...++.|.+||..+++...... ++...+.++.+.+..++ +..++..+.|.
T Consensus 17 ~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~~~~~~l~ 95 (314)
T 1pjx_A 17 IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVADMRLGLL 95 (314)
T ss_dssp CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEEETTTEEE
T ss_pred CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEEECCCCEE
Confidence 345678899999987777 5778899999988887643322 24567888888763244 44444455799
Q ss_pred EEEccCCeeeeE-Eee-----cCceeEEEEccCCCEEEEEeCC---------------CcEEEEECCCCeeeEEEecccc
Q 017314 199 VWDLHKGYCVNT-IIF-----HSNCNALAFSMDGQTIFSGHID---------------GNLRLWDIQTGKLLSEVAAHSL 257 (373)
Q Consensus 199 vwd~~~~~~~~~-~~~-----~~~~~~~~~~~~g~~l~sg~~d---------------g~i~iwd~~~~~~~~~~~~~~~ 257 (373)
+||.. +..... ... ...+..++++|+|++.++...+ +.|..||.. ++..... .+ .
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~-~ 171 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TA-F 171 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EE-E
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cC-C
Confidence 99988 654322 111 1236789999999988777655 567777765 5443322 22 1
Q ss_pred cceEEEEEc----CCCCEE-EEeeCCCeEEEEEcc-cccee--eeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEE
Q 017314 258 AAVTSISLS----RSGNII-LTSGRDNLHNLFDIR-SLEVC--GSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYI 329 (373)
Q Consensus 258 ~~v~~~~~~----~~~~~l-~s~~~d~~i~~~d~~-~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~i 329 (373)
.....++++ |+++.| ++...++.+.+||.. ..... ..+.............++++++|.++++...++.|.+
T Consensus 172 ~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 172 QFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp SSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred CCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 356788999 999755 455567899999976 22211 1111100000011233678999999888888889999
Q ss_pred EEccCceEEEEeccCCccEEEEEEcCCCCcE-EEEeCCCeEEEc
Q 017314 330 WSISKADIVRTLKEHTAPVLSCSWSGLGKPL-ASADKNGVVCVW 372 (373)
Q Consensus 330 wd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l-~s~s~dg~i~iW 372 (373)
||..+++.+..+..+...+.+++|+|+|++| ++...++.|..|
T Consensus 252 ~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~ 295 (314)
T 1pjx_A 252 FGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKF 295 (314)
T ss_dssp ECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEE
Confidence 9998777777777776789999999999955 455556777665
No 205
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.64 E-value=7.6e-13 Score=115.72 Aligned_cols=235 Identities=10% Similarity=0.046 Sum_probs=165.2
Q ss_pred cccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEE-eecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCee
Q 017314 129 CLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHT-LTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYC 207 (373)
Q Consensus 129 ~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~ 207 (373)
+...+.+++++++|+.+++...++.|.+||.. ++.... +..+...+..+.+.+ ++...++...++.|..||.. +..
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~ 89 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKK-GII 89 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCC-CcE
Confidence 34568899999999987777678899999988 554332 233456788888876 56666776668899999986 332
Q ss_pred eeEEee---cCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEE
Q 017314 208 VNTIIF---HSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLF 284 (373)
Q Consensus 208 ~~~~~~---~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~ 284 (373)
..+.. ...+..+++.|+|...++...++.|..||. +++............+..++++++++++++...++.+..|
T Consensus 90 -~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 90 -KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp -EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred -EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 22322 235788999999988888777889999998 5554332222223568899999999988888778889999
Q ss_pred EccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEE-eccCCccEEEEEEcCCCCcEEEE
Q 017314 285 DIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRT-LKEHTAPVLSCSWSGLGKPLASA 363 (373)
Q Consensus 285 d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~-l~~h~~~V~~~~~s~~g~~l~s~ 363 (373)
|. +.+... +..... ......++++++|.+.++...++.|.+|+. +++.... +..+...+.+++++|+|+..++.
T Consensus 168 ~~-~g~~~~-~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 168 TE-SGDITE-FKIPTP--ASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp CT-TCCEEE-EECSST--TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred cC-CCcEEE-eeCCCC--CCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEec
Confidence 98 544322 211110 112234678999998887777889999999 6654432 33455678999999999877766
Q ss_pred eCCCeEEEcC
Q 017314 364 DKNGVVCVWT 373 (373)
Q Consensus 364 s~dg~i~iW~ 373 (373)
..++.|..|+
T Consensus 243 ~~~~~i~~~d 252 (299)
T 2z2n_A 243 WGANKIGRLT 252 (299)
T ss_dssp TTTTEEEEEE
T ss_pred cCCceEEEEC
Confidence 5677777663
No 206
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.64 E-value=4.6e-14 Score=126.69 Aligned_cols=262 Identities=12% Similarity=0.089 Sum_probs=170.3
Q ss_pred CcEEEEEEcCCCCEEEEee--CCCcEEEEeCCCCcee------eeccccccceEEEEEcCCCCEEEEEeC-----CCcEE
Q 017314 89 GGCASILFEYNSARLISGG--QDKSIKLWDTNTGSLS------STLYGCLGSVLDLAITHDNRSVIAASS-----SNNLY 155 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s--~D~~v~iwd~~~~~~~------~~~~~~~~~v~~~~~~~~~~~l~s~s~-----d~~i~ 155 (373)
.....++++++|+.+++.. .++.++||.+.+++.. ....++...+..++++++++++++-.. +..|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 5678999999999988864 2343666665555433 111234568999999999876665544 57899
Q ss_pred EEEcCCCeeEEEeecC------CCcEEEEEEeeCCCCEEEEEe---CCCcEEEEEccCCeeeeEEeecCc--eeEEEEcc
Q 017314 156 VWDVNSGRVRHTLTGH------TDKVCAVDVSKISSRHVVSAA---YDRTLKVWDLHKGYCVNTIIFHSN--CNALAFSM 224 (373)
Q Consensus 156 iwd~~~~~~~~~~~~h------~~~v~~~~~~~~~~~~~~s~s---~D~~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~ 224 (373)
+||+.+++.+..+... ...+..+++.+..+..+++.+ .++.|.+||+.++...+.+..+.. .....+.+
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~ 176 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVI 176 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEE
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeE
Confidence 9999999877766532 234577888764455556666 689999999988875544322211 11144556
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCC-eEEEEEccccc--------eeeee
Q 017314 225 DGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDN-LHNLFDIRSLE--------VCGSL 295 (373)
Q Consensus 225 ~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~-~i~~~d~~~~~--------~~~~~ 295 (373)
+|..+.+.+.||.++.|. ..+..++++|+++.|+.+..++ .+..++..... ....+
T Consensus 177 ~g~~~~~~~~~g~~~~~~---------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 241 (343)
T 2qe8_A 177 DGVPVQIGQPDGTVIRPH---------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKI 241 (343)
T ss_dssp TTEECBEECTTSCEECCC---------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTC
T ss_pred CCEEEEeccCCCceecee---------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcce
Confidence 777777778888876653 1356799999999888876655 44444432110 00000
Q ss_pred eecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEecc-CCccEEEEEEcCCCCcEEEEeCCC
Q 017314 296 RATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE-HTAPVLSCSWSGLGKPLASADKNG 367 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~-h~~~V~~~~~s~~g~~l~s~s~dg 367 (373)
...+. ......++++++|.++++...++.|.+||..+++....... +...+.+++|+|+|+++++.+..+
T Consensus 242 ~~~g~--~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 242 ERYSE--KPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp EEEEE--CCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred Eeccc--CCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 00000 00112367899999999999999999999856664333322 234579999999998777776443
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.64 E-value=7e-14 Score=127.68 Aligned_cols=269 Identities=10% Similarity=0.050 Sum_probs=181.0
Q ss_pred CCCCEEEEeeC-C----CcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCC
Q 017314 98 YNSARLISGGQ-D----KSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS----------SSNNLYVWDVNSG 162 (373)
Q Consensus 98 ~~~~~l~s~s~-D----~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s----------~d~~i~iwd~~~~ 162 (373)
+++.+++.+.. + ++|.++|..+++.+.++.....+ .++++||+++++.+. .++.|.++|..++
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 35555554443 2 69999999999998888765555 799999999888776 4679999999999
Q ss_pred eeEEEeecC-------CCcEEEEEEeeCCCCEEEEEeC--CCcEEEEEccCCeeeeEEeecCceeEEEEccCC-CEEEEE
Q 017314 163 RVRHTLTGH-------TDKVCAVDVSKISSRHVVSAAY--DRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDG-QTIFSG 232 (373)
Q Consensus 163 ~~~~~~~~h-------~~~v~~~~~~~~~~~~~~s~s~--D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g-~~l~sg 232 (373)
+.+..+.-- ......+.++| ++++++.+.. +++|.+.|+.+++.+.++..... ....|+| ..+++.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMN 235 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEE
Confidence 988776421 12234566777 5677777664 68999999999998887765432 2334443 455667
Q ss_pred eCCCcEEEEECCCCeeeEE----EecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce--eeeeeec------CC
Q 017314 233 HIDGNLRLWDIQTGKLLSE----VAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV--CGSLRAT------GN 300 (373)
Q Consensus 233 ~~dg~i~iwd~~~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~--~~~~~~~------~~ 300 (373)
+.||.+.+.+..+++.... +..........+.+.+++..++..+..+.+.+.|...... ...+... ..
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g 315 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADD 315 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGT
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccc
Confidence 7788888888766554422 1111111112346788888777767788899999864332 1111100 00
Q ss_pred eeecCeeeeEECCCCcEEEEEeC----------CCcEEEEEccCceEEEEeccCCccEEEEEEcCCCC-cEEEEe-CCCe
Q 017314 301 RVASNWSRSCISPDESYVAAGSA----------DGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGK-PLASAD-KNGV 368 (373)
Q Consensus 301 ~~~~~~~~~~~s~~~~~l~sgs~----------Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~-~l~s~s-~dg~ 368 (373)
.....+...+++|++.++..... ++.|.+.|..+.+.++.+.-.. ...+++|+|||+ +++++. .++.
T Consensus 316 ~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 316 WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEEEEETTTTE
T ss_pred cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEEEEcCCCCe
Confidence 11111223578999886665532 3579999999999998886322 468999999999 777777 5899
Q ss_pred EEEcC
Q 017314 369 VCVWT 373 (373)
Q Consensus 369 i~iW~ 373 (373)
|.++|
T Consensus 395 VsVID 399 (426)
T 3c75_H 395 LHIYD 399 (426)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 98864
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.61 E-value=7.8e-13 Score=121.43 Aligned_cols=238 Identities=13% Similarity=0.121 Sum_probs=163.2
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCC--cEEEEEcCCCeeEE
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSN--NLYVWDVNSGRVRH 166 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~--~i~iwd~~~~~~~~ 166 (373)
.....++|++++..+++...++.|++||..++......... .... ++|+++++.|+++..++ .|.+|+..++....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETC-CBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccC-CCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 35678999999998888888899999999887765544332 2334 89999999999988866 78899887654433
Q ss_pred Ee----ecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeE----EeecCcee---EEEEccC-CCEEEEEeC
Q 017314 167 TL----TGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNT----IIFHSNCN---ALAFSMD-GQTIFSGHI 234 (373)
Q Consensus 167 ~~----~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~----~~~~~~~~---~~~~~~~-g~~l~sg~~ 234 (373)
.+ ..+...+.++++++.++ .|+.+..++.|..||..++..... ........ .++|+|+ +.++++-..
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSS-EEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EeeeccchhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 33 22445567788887444 455577789999999987653221 11111122 8999995 555556667
Q ss_pred CCcEEEEECCCCeeeEEEeccc--------------ccceEEEEEcCCCCEEEEee-CCCeEEEEEccccceeeeeeecC
Q 017314 235 DGNLRLWDIQTGKLLSEVAAHS--------------LAAVTSISLSRSGNIILTSG-RDNLHNLFDIRSLEVCGSLRATG 299 (373)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~--------------~~~v~~~~~~~~~~~l~s~~-~d~~i~~~d~~~~~~~~~~~~~~ 299 (373)
++.|+.||.... +..+.++. ......++++|+|+++++.. .++.|+.||+..+.. ..+....
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~ 364 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQV 364 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCC
Confidence 889999997643 23333221 23478999999999888888 899999999765543 2332220
Q ss_pred Ce-----------eecCeeeeEECCCCcEEEEEeCCCcEEEEEc
Q 017314 300 NR-----------VASNWSRSCISPDESYVAAGSADGSVYIWSI 332 (373)
Q Consensus 300 ~~-----------~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~ 332 (373)
.. .......++++|+|.++++-..+++|+.+++
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 00 0111234678999988888888888888765
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.60 E-value=3.8e-14 Score=127.74 Aligned_cols=171 Identities=11% Similarity=0.095 Sum_probs=134.6
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc---------e-eeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEc
Q 017314 90 GCASILFEYNSARLISGGQDKSIKLWDTNTGS---------L-SSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDV 159 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~---------~-~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~ 159 (373)
.++.+++++...++++|+.| .+++|+++... . ......+.+ |+.++| |++.|+.+ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 68889999999999999998 45559865433 1 112223455 999999 88999988 8899999999
Q ss_pred CCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEeCCCcEE
Q 017314 160 NSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGHIDGNLR 239 (373)
Q Consensus 160 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~ 239 (373)
.+.........|...+..+.+.+. .++.++.||+|.+||+..+.... ....+.+++|+|+| ++.|..||+++
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG--~~vg~~dg~i~ 185 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQ--LAVLLKDRSFQ 185 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEEE---EEESEEEEEECSSE--EEEEETTSCEE
T ss_pred hhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcccc---ccCCceEEEEcCCc--eEEEEcCCcEE
Confidence 877666667778888887765542 38889999999999999776543 34579999999999 67899999999
Q ss_pred EEECCCCee--eEEEe---------cccccceEEEEEcCCCCEEEE
Q 017314 240 LWDIQTGKL--LSEVA---------AHSLAAVTSISLSRSGNIILT 274 (373)
Q Consensus 240 iwd~~~~~~--~~~~~---------~~~~~~v~~~~~~~~~~~l~s 274 (373)
+|+...++. ..++. .| ...|.++.|.+++.++++
T Consensus 186 ~~~~~~~~~~~k~~I~~Pp~~~~~~~~-~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 186 SFAWRNGEMEKQFEFSLPSELEELPVE-EYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEETTEEEEEEEECCCHHHHTSCTT-TSEEEEEEESSSSEEEEE
T ss_pred EEcCCCccccccceecCCcccccccCC-CeeEEEEEEecCCeEEEE
Confidence 999988775 45552 13 367999999999998887
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.59 E-value=2.1e-12 Score=118.50 Aligned_cols=236 Identities=11% Similarity=0.106 Sum_probs=161.1
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCC--cEEEEEccCCeee
Q 017314 131 GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDR--TLKVWDLHKGYCV 208 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~--~i~vwd~~~~~~~ 208 (373)
.....++|+++++++++...++.|++||+.+++......... ... +++++ +++.++.+..++ .|.+||...+...
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~~~ 207 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKASGWAP 207 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGGTTCE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEec-CCCcEEEEecCCCceEEEEEcCCCcee
Confidence 457889999999877777777899999999887766555432 233 77877 566788887766 7888888766543
Q ss_pred eEE----e-ecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEE----Eecccccc-eEEEEEcCC-CCEEEEeeC
Q 017314 209 NTI----I-FHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSE----VAAHSLAA-VTSISLSRS-GNIILTSGR 277 (373)
Q Consensus 209 ~~~----~-~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~----~~~~~~~~-v~~~~~~~~-~~~l~s~~~ 277 (373)
..+ . ....+..++++|++..|+.+..++.|+.||..++..... ........ ...++|+|+ +.++++...
T Consensus 208 ~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~ 287 (409)
T 3hrp_A 208 TRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN 287 (409)
T ss_dssp EEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT
T ss_pred EEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC
Confidence 333 1 223467899999555666677788999999987753222 11111111 128999995 666667777
Q ss_pred CCeEEEEEccccceeeeeeecC------Ce-----eecCeeeeEECCCCcEEEEEe-CCCcEEEEEccCceEEEEeccC-
Q 017314 278 DNLHNLFDIRSLEVCGSLRATG------NR-----VASNWSRSCISPDESYVAAGS-ADGSVYIWSISKADIVRTLKEH- 344 (373)
Q Consensus 278 d~~i~~~d~~~~~~~~~~~~~~------~~-----~~~~~~~~~~s~~~~~l~sgs-~Dg~i~iwd~~~~~~~~~l~~h- 344 (373)
++.|..|+.... ...+.... .. .......++++|+|.++++-+ .++.|+.|++.++.. .++.++
T Consensus 288 ~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~ 364 (409)
T 3hrp_A 288 LSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQV 364 (409)
T ss_dssp TTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECT
T ss_pred CCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCC
Confidence 889999987542 22222211 00 001123468999999888888 899999999877764 334343
Q ss_pred --------------CccEEEEEEcCCCCcEEEEeCCCeEEEc
Q 017314 345 --------------TAPVLSCSWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 345 --------------~~~V~~~~~s~~g~~l~s~s~dg~i~iW 372 (373)
-.....++++|+|.++++-..++.|+.+
T Consensus 365 ~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 365 DVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp TCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred CCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 2357899999998888888888888764
No 211
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.56 E-value=1.5e-12 Score=118.88 Aligned_cols=240 Identities=13% Similarity=0.066 Sum_probs=170.0
Q ss_pred EEEEcCCCCEEEEee----------CCCcEEEEeCCCCceeeecccc-------ccceEEEEEcCCCCEEEEEeC--CCc
Q 017314 93 SILFEYNSARLISGG----------QDKSIKLWDTNTGSLSSTLYGC-------LGSVLDLAITHDNRSVIAASS--SNN 153 (373)
Q Consensus 93 ~~~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~l~s~s~--d~~ 153 (373)
.+.++||+++|+.+. .++.|.++|..+++....+.-. ......++|+|||++++.+.. +++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 799999999888876 4679999999999887766421 123456899999999998874 578
Q ss_pred EEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE----eecCc--eeEEEEccCCC
Q 017314 154 LYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI----IFHSN--CNALAFSMDGQ 227 (373)
Q Consensus 154 i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~----~~~~~--~~~~~~~~~g~ 227 (373)
|.+.|+.+++.+.++.--. . ....|.....+++.+.||++.+.+...+...... ..... ...+.+.+++.
T Consensus 202 VsVID~~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~ 277 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG 277 (426)
T ss_dssp EEEEETTTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC
T ss_pred EEEEECCCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC
Confidence 9999999999888776421 1 2233434567788889999998888655443221 11111 12356789988
Q ss_pred EEEEEeCCCcEEEEECCCCeee--EEEecc---------cccceEEEEEcCCCCEEEEeeC----------CCeEEEEEc
Q 017314 228 TIFSGHIDGNLRLWDIQTGKLL--SEVAAH---------SLAAVTSISLSRSGNIILTSGR----------DNLHNLFDI 286 (373)
Q Consensus 228 ~l~sg~~dg~i~iwd~~~~~~~--~~~~~~---------~~~~v~~~~~~~~~~~l~s~~~----------d~~i~~~d~ 286 (373)
.++..+..+.|.+.|+...... ..+... .......+.++|+++.++.... ++.+.++|.
T Consensus 278 ~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 278 RLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp EEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 8877778899999998655321 111100 0011123689999887666532 357999999
Q ss_pred cccceeeeeeecCCeeecCeeeeEECCCCc-EEEEEe-CCCcEEEEEccCceEEEEe
Q 017314 287 RSLEVCGSLRATGNRVASNWSRSCISPDES-YVAAGS-ADGSVYIWSISKADIVRTL 341 (373)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~sgs-~Dg~i~iwd~~~~~~~~~l 341 (373)
.+.+.+.++...... ..+.|+|||+ ++++.. .++.|.++|..+++.++++
T Consensus 358 ~T~kvv~~I~vg~~P-----~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 358 ETGERINKIELGHEI-----DSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTCCEEEEEEEEEEE-----CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEEECCCCc-----CeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999998887643322 2367899999 888777 5999999999999999887
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.56 E-value=4.4e-12 Score=111.75 Aligned_cols=231 Identities=14% Similarity=0.084 Sum_probs=152.0
Q ss_pred cccceEEEEEcCCCC-EEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCee
Q 017314 129 CLGSVLDLAITHDNR-SVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYC 207 (373)
Q Consensus 129 ~~~~v~~~~~~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~ 207 (373)
.........|+++++ .+++...++.|..|+. +++ ...+..+...+..+.+.+ +++++++...++.|.+||.. +..
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-CCE
Confidence 334456788999998 5566667889999998 454 345555667788898887 56655555556889999986 443
Q ss_pred eeEEee-----cCceeEEEEccCCCEEEE----EeC-------------CCcEEEEECCCCeeeEEEecccccceEEEEE
Q 017314 208 VNTIIF-----HSNCNALAFSMDGQTIFS----GHI-------------DGNLRLWDIQTGKLLSEVAAHSLAAVTSISL 265 (373)
Q Consensus 208 ~~~~~~-----~~~~~~~~~~~~g~~l~s----g~~-------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (373)
...... ...++.++++|+|++.++ |.. .+.|..||..+++..... .......++|
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~~p~gl~~ 195 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLDHPNGLAF 195 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EESSEEEEEE
T ss_pred EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCCCCcceEE
Confidence 221111 123567999999998886 432 256788887766654332 2246788999
Q ss_pred cCCCCEEEEeeCC------CeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEE
Q 017314 266 SRSGNIILTSGRD------NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVR 339 (373)
Q Consensus 266 ~~~~~~l~s~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~ 339 (373)
+|+++.|+.+... +.|..|++.... .................++++++|.+.++ +.+| |.+|+. .++.+.
T Consensus 196 spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~g-v~~~~~-~g~~~~ 271 (305)
T 3dr2_A 196 SPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGTG-VCVFDS-DGQLLG 271 (305)
T ss_dssp CTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEEC-CSSE-EEEECT-TSCEEE
T ss_pred cCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEe-cCCc-EEEECC-CCCEEE
Confidence 9999977776654 689999886433 11110000000001123568899985544 4555 999998 567777
Q ss_pred EeccCCccEEEEEEcCCCCcEEEEeCCCeEEE
Q 017314 340 TLKEHTAPVLSCSWSGLGKPLASADKNGVVCV 371 (373)
Q Consensus 340 ~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~i 371 (373)
.+..+. .+..++|+|+++.|..++.++..++
T Consensus 272 ~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 272 HIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp EEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred EEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 776555 5789999999998888887776655
No 213
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.55 E-value=3.5e-11 Score=105.11 Aligned_cols=234 Identities=10% Similarity=0.033 Sum_probs=163.1
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEE-EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeee
Q 017314 130 LGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRH-TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCV 208 (373)
Q Consensus 130 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~ 208 (373)
...+.++++.++++..++...++.|.+||.. ++... .+..+...+..+.+.+ ++...++...++.|..+|.. +...
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGFT 95 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCC-CCeE
Confidence 4567889999999988877788999999988 65443 2233345678888875 56666666668899999987 5442
Q ss_pred eEEee---cCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEE
Q 017314 209 NTIIF---HSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFD 285 (373)
Q Consensus 209 ~~~~~---~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d 285 (373)
.+.. ...+..+++.++|.+.++...++.|..+|.. ++............+..++++++++++++...++.+..+|
T Consensus 96 -~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 96 -EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp -EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred -EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 2322 2457889999999988887778899999987 5544222221235688999999999887777788898998
Q ss_pred ccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEE-eccCCccEEEEEEcCCCCcEEEEe
Q 017314 286 IRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRT-LKEHTAPVLSCSWSGLGKPLASAD 364 (373)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~-l~~h~~~V~~~~~s~~g~~l~s~s 364 (373)
. ..+... +..... ......++++++|.+.++....+.|.+|+. +++.... +..+...+.+++++++|+..++..
T Consensus 174 ~-~g~~~~-~~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 174 N-TGKLEE-YPLPTN--AAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp T-TCCEEE-EECSST--TCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred C-CCcEEE-eeCCCC--CCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc
Confidence 7 433322 221111 011234678899988887777788999998 5554332 334456789999999998767666
Q ss_pred CCCeEEEcC
Q 017314 365 KNGVVCVWT 373 (373)
Q Consensus 365 ~dg~i~iW~ 373 (373)
.++.|..|+
T Consensus 249 ~~~~i~~~~ 257 (300)
T 2qc5_A 249 GANQIGRIT 257 (300)
T ss_dssp TTTEEEEEC
T ss_pred CCCeEEEEC
Confidence 677787764
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=1.3e-11 Score=108.36 Aligned_cols=223 Identities=12% Similarity=0.101 Sum_probs=145.7
Q ss_pred EEEEEcCCCCE-EEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe
Q 017314 134 LDLAITHDNRS-VIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII 212 (373)
Q Consensus 134 ~~~~~~~~~~~-l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~ 212 (373)
-...|+++++. +++...++.|..||..+++.. .+. ....+.++.+.+ +++++++ . ++.|.+||..++.......
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVT-MDAPVSSVALRQ-SGGYVAT-I-GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEE-CSSCEEEEEEBT-TSSEEEE-E-TTEEEEEETTTTEEEEEEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEe-CCCceEEEEECC-CCCEEEE-E-CCeEEEEECCCCcEEEEEe
Confidence 35678886554 455556789999999887653 232 346788898887 4565444 4 6689999998876533222
Q ss_pred ec-----CceeEEEEccCCCEEEEEeCC---------CcEEEEECCC-CeeeEEEecccccceEEEEEcCCCCEE-EEee
Q 017314 213 FH-----SNCNALAFSMDGQTIFSGHID---------GNLRLWDIQT-GKLLSEVAAHSLAAVTSISLSRSGNII-LTSG 276 (373)
Q Consensus 213 ~~-----~~~~~~~~~~~g~~l~sg~~d---------g~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~ 276 (373)
.. ..++.++++|+|++.++...+ ..-.+|.+.. ++.. .+... ....+.++|+|+++.| ++.+
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~-~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQ-VDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEE-ESBEEEEEECTTSCEEEEEEG
T ss_pred cCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeec-cccccceEEcCCCCEEEEecC
Confidence 11 236889999999976654322 2344555432 3332 22222 2456889999999866 4556
Q ss_pred CCCeEEEEEcc--cccee--eeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEE
Q 017314 277 RDNLHNLFDIR--SLEVC--GSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCS 352 (373)
Q Consensus 277 ~d~~i~~~d~~--~~~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~ 352 (373)
.++.|..||+. ++... ..+..... .......++++++|.+.++...++.|.+||..+++.+..+..+...+++++
T Consensus 169 ~~~~i~~~~~d~~~G~~~~~~~~~~~~~-~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~ 247 (297)
T 3g4e_A 169 LSYSVDAFDYDLQTGQISNRRSVYKLEK-EEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCC 247 (297)
T ss_dssp GGTEEEEEEECTTTCCEEEEEEEEECCG-GGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEE
T ss_pred CCCcEEEEeccCCCCcccCcEEEEECCC-CCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEE
Confidence 67889999873 33221 11111000 001112367899998888888888999999999999988887877899999
Q ss_pred Ec-CCCCcEEEEe
Q 017314 353 WS-GLGKPLASAD 364 (373)
Q Consensus 353 ~s-~~g~~l~s~s 364 (373)
|+ |+++.|..++
T Consensus 248 f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 248 FGGKNYSEMYVTC 260 (297)
T ss_dssp EESGGGCEEEEEE
T ss_pred EeCCCCCEEEEEc
Confidence 98 8888664443
No 215
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.51 E-value=1.2e-10 Score=102.01 Aligned_cols=223 Identities=12% Similarity=0.120 Sum_probs=147.7
Q ss_pred cEEEEEEcCCC-CEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q 017314 90 GCASILFEYNS-ARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 90 ~v~~~~~~~~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 168 (373)
---+..|++++ ..+++...++.|..||..++... .+ .....+.+++++++++++++ . ++.|.+||..+++.....
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~-~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~ 89 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RV-TMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLA 89 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EE-ECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEE
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EE-eCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEE
Confidence 34567888854 46667777899999999887652 22 23567889999999995554 3 568999999888754433
Q ss_pred ecC----CCcEEEEEEeeCCCCEEEEEeC---------CCcEEEEEccC-CeeeeEEeecCceeEEEEccCCCEEE-EEe
Q 017314 169 TGH----TDKVCAVDVSKISSRHVVSAAY---------DRTLKVWDLHK-GYCVNTIIFHSNCNALAFSMDGQTIF-SGH 233 (373)
Q Consensus 169 ~~h----~~~v~~~~~~~~~~~~~~s~s~---------D~~i~vwd~~~-~~~~~~~~~~~~~~~~~~~~~g~~l~-sg~ 233 (373)
... ...+..+.+.+ ++++.++... ...-.+|.+.. +............+.++|+||++.|+ +.+
T Consensus 90 ~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~ 168 (297)
T 3g4e_A 90 TVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDS 168 (297)
T ss_dssp ECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEG
T ss_pred ecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecC
Confidence 221 23467788877 5665554432 23345665543 33322222334568899999999775 555
Q ss_pred CCCcEEEEEC--CCCeee-----EEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCe
Q 017314 234 IDGNLRLWDI--QTGKLL-----SEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNW 306 (373)
Q Consensus 234 ~dg~i~iwd~--~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 306 (373)
.++.|.+||+ .++... ..+... ......++++++|++.++...++.|..||..+++....+..+....
T Consensus 169 ~~~~i~~~~~d~~~G~~~~~~~~~~~~~~-~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~---- 243 (297)
T 3g4e_A 169 LSYSVDAFDYDLQTGQISNRRSVYKLEKE-EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKT---- 243 (297)
T ss_dssp GGTEEEEEEECTTTCCEEEEEEEEECCGG-GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBE----
T ss_pred CCCcEEEEeccCCCCcccCcEEEEECCCC-CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCc----
Confidence 6789999987 455432 111111 2467889999999998888888899999998777777665443222
Q ss_pred eeeEEC-CCCcEEEEEe
Q 017314 307 SRSCIS-PDESYVAAGS 322 (373)
Q Consensus 307 ~~~~~s-~~~~~l~sgs 322 (373)
..++|+ |+++.|...+
T Consensus 244 t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 244 TSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEEESGGGCEEEEEE
T ss_pred eEEEEeCCCCCEEEEEc
Confidence 346786 7777655444
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.48 E-value=3.6e-12 Score=114.82 Aligned_cols=171 Identities=15% Similarity=0.087 Sum_probs=129.5
Q ss_pred cEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCe-----------eeeEEeecCceeEEEEccCCCEEEEEeCCCcEEEEE
Q 017314 174 KVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGY-----------CVNTIIFHSNCNALAFSMDGQTIFSGHIDGNLRLWD 242 (373)
Q Consensus 174 ~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~-----------~~~~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd 242 (373)
.+..+++++ ....+++|+.| .+++|++.... ......... +..++| |+++|+++ .++.|++||
T Consensus 39 ~~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 577788887 56788889888 46669875332 112334455 999999 99999998 889999999
Q ss_pred CCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEe
Q 017314 243 IQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGS 322 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs 322 (373)
+++.........+. ..+.++.+.+. .+++++.|+.+.+||+....... .......+|+||+| ++.|.
T Consensus 113 v~sl~~~~~~~~~~-~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~--------~~~~Vs~v~WSpkG--~~vg~ 179 (388)
T 1xip_A 113 LEELSEFRTVTSFE-KPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ--------LAQNVTSFDVTNSQ--LAVLL 179 (388)
T ss_dssp SSSTTCEEEEEECS-SCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE--------EEESEEEEEECSSE--EEEEE
T ss_pred chhhhccCccceee-cceeeEEecCC--CEEEEECCCCEEEEEccCCcccc--------ccCCceEEEEcCCc--eEEEE
Confidence 98776555555554 45777776654 38889999999999998665422 22345568899999 67899
Q ss_pred CCCcEEEEEccCceE--EEEe------c---cCCccEEEEEEcCCCCcEEEE
Q 017314 323 ADGSVYIWSISKADI--VRTL------K---EHTAPVLSCSWSGLGKPLASA 363 (373)
Q Consensus 323 ~Dg~i~iwd~~~~~~--~~~l------~---~h~~~V~~~~~s~~g~~l~s~ 363 (373)
.||+|++|+...+.. .+++ . +|...|.++.|.++++++++-
T Consensus 180 ~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 180 KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 999999999888775 5556 3 377899999999999988873
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=1.9e-10 Score=102.31 Aligned_cols=220 Identities=12% Similarity=0.045 Sum_probs=142.4
Q ss_pred EEEEEcCCCCE-EEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe
Q 017314 134 LDLAITHDNRS-VIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII 212 (373)
Q Consensus 134 ~~~~~~~~~~~-l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~ 212 (373)
...+|+|++.. +++...++.|.+||..+++... +. ....+.++.+.+ +++++++ +.+ .|.+||..++.......
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~-~~~~v~~i~~~~-dg~l~v~-~~~-gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKTV-HA-LPFMGSALAKIS-DSKQLIA-SDD-GLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EE-CSSCEEEEEEEE-TTEEEEE-ETT-EEEEEETTTCCEEEEEC
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EE-CCCcceEEEEeC-CCeEEEE-ECC-CEEEEECCCCcEEEEee
Confidence 34678887654 4555567899999998876542 32 345788888887 4555554 444 49999998776433222
Q ss_pred ec-----CceeEEEEccCCCEEEEEeC------CCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEE-eeCCCe
Q 017314 213 FH-----SNCNALAFSMDGQTIFSGHI------DGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILT-SGRDNL 280 (373)
Q Consensus 213 ~~-----~~~~~~~~~~~g~~l~sg~~------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~~~d~~ 280 (373)
.. ..++.++++|+|+++++... .+.|..+| +++.. .+... ......++|+|+++.++. .+.++.
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~-~~~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFAD-ISIPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEE-ESSEEEEEECTTSCEEEEEETTTCE
T ss_pred CCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCC-CcccCCeEEcCCCCEEEEEECCCCE
Confidence 11 23788999999997765432 24566666 45433 22222 235678999999986654 455788
Q ss_pred EEEEEcc--cc-cee--eeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEc-
Q 017314 281 HNLFDIR--SL-EVC--GSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWS- 354 (373)
Q Consensus 281 i~~~d~~--~~-~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s- 354 (373)
|.+||+. ++ ... ..+..... .......++++++|.+.++...++.|.+|+. +++.+..+..+...+++++|+
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~~-~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g 280 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDSTG-IKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIG 280 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECTT-SSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEES
T ss_pred EEEEEcccccCCcccCceEEEECCC-CCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEec
Confidence 9999975 33 211 11111000 0011123678899988887777788999998 677777777777779999998
Q ss_pred CCCCcEEEEe
Q 017314 355 GLGKPLASAD 364 (373)
Q Consensus 355 ~~g~~l~s~s 364 (373)
|+++.|+.++
T Consensus 281 ~d~~~L~vt~ 290 (326)
T 2ghs_A 281 PDASRLLVTS 290 (326)
T ss_dssp TTSCEEEEEE
T ss_pred CCCCEEEEEe
Confidence 8888664443
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.48 E-value=4.4e-11 Score=105.30 Aligned_cols=232 Identities=13% Similarity=0.082 Sum_probs=151.2
Q ss_pred EEecCccCcEEEEEEcCCCC-EEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 017314 82 HKINAHEGGCASILFEYNSA-RLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 82 ~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 160 (373)
..+..+........|+++++ .++++..++.|..|+. ++. ...+..+...+..++++++|+++++...++.|.+|+..
T Consensus 38 ~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 34444555667889999998 6777778899999998 444 34444556678899999999977666666889999986
Q ss_pred CCeeEEEeecC----CCcEEEEEEeeCCCCEEEE----EeC-------------CCcEEEEEccCCeeeeEEeecCceeE
Q 017314 161 SGRVRHTLTGH----TDKVCAVDVSKISSRHVVS----AAY-------------DRTLKVWDLHKGYCVNTIIFHSNCNA 219 (373)
Q Consensus 161 ~~~~~~~~~~h----~~~v~~~~~~~~~~~~~~s----~s~-------------D~~i~vwd~~~~~~~~~~~~~~~~~~ 219 (373)
++........ ...+..+.+.+ ++++.+| |.. .+.|..+|..++...... .....+.
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~g 192 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNG 192 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEE
T ss_pred -CCEEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcc
Confidence 5533221111 12345677776 5666665 332 245777777666543333 3345688
Q ss_pred EEEccCCCEEEEEeCC------CcEEEEECCCCeee--EEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce
Q 017314 220 LAFSMDGQTIFSGHID------GNLRLWDIQTGKLL--SEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV 291 (373)
Q Consensus 220 ~~~~~~g~~l~sg~~d------g~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~ 291 (373)
++|+||++.|+.+... +.|.+||+..+... ..+..........+.++++|++.++. .+ .|.+|+.. .+.
T Consensus 193 l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~~-g~~ 269 (305)
T 3dr2_A 193 LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDSD-GQL 269 (305)
T ss_dssp EEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS-EEEEECTT-SCE
T ss_pred eEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC-cEEEECCC-CCE
Confidence 9999999988877665 68999998765411 11111111345578999999966555 44 48889874 444
Q ss_pred eeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCc
Q 017314 292 CGSLRATGNRVASNWSRSCISPDESYVAAGSADGS 326 (373)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~ 326 (373)
...+..... ...++|+|+++.|..++.++.
T Consensus 270 ~~~~~~~~~-----~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 270 LGHIPTPGT-----ASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp EEEEECSSC-----CCEEEECTTSCEEEEEETTEE
T ss_pred EEEEECCCc-----eeEEEEeCCCCEEEEEcCCeE
Confidence 555543321 234678899988888877653
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.47 E-value=8.8e-12 Score=122.41 Aligned_cols=241 Identities=14% Similarity=0.132 Sum_probs=152.6
Q ss_pred CccCcEEEEEEcCCCCEEE-----EeeCCCcEEEEeCCCCceeee-ccccccceEEEEEcCCCCEEEEEeCCCc------
Q 017314 86 AHEGGCASILFEYNSARLI-----SGGQDKSIKLWDTNTGSLSST-LYGCLGSVLDLAITHDNRSVIAASSSNN------ 153 (373)
Q Consensus 86 ~h~~~v~~~~~~~~~~~l~-----s~s~D~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~s~d~~------ 153 (373)
+|...+..+.|||||++|| +|+.+.+|++||+.+++.+.. +.+ .....++|+ |++.|+.++.+..
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD--VKFSGISWL-GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE--EESCCCEEE-TTTEEEEEESSCCC-----
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC--ceeccEEEe-CCCEEEEEEecCccccccc
Confidence 3556788999999999888 444557899999999986443 111 113467899 9999999888754
Q ss_pred -------EEEEEcCCCe----eEEEeec-CCCcEEEEEEeeCCCCEE-EEEeC---CCcEEEEEccCCe-eeeEEeecCc
Q 017314 154 -------LYVWDVNSGR----VRHTLTG-HTDKVCAVDVSKISSRHV-VSAAY---DRTLKVWDLHKGY-CVNTIIFHSN 216 (373)
Q Consensus 154 -------i~iwd~~~~~----~~~~~~~-h~~~v~~~~~~~~~~~~~-~s~s~---D~~i~vwd~~~~~-~~~~~~~~~~ 216 (373)
|++|++.+++ ++..... |...+..+.+++. ++++ ++.+. +..|.++|+.++. ....+..+..
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpD-g~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTED-DRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTT-SCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCC-CCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC
Confidence 9999998764 2333333 4455678888884 5555 44443 3589999997663 3334444433
Q ss_pred eeEEEEccCCCEEEE-EeCC---CcEEEEECCCCee--eEEEecccccceEEEEEcCCCCEEEEeeCCC---eEEEEEcc
Q 017314 217 CNALAFSMDGQTIFS-GHID---GNLRLWDIQTGKL--LSEVAAHSLAAVTSISLSRSGNIILTSGRDN---LHNLFDIR 287 (373)
Q Consensus 217 ~~~~~~~~~g~~l~s-g~~d---g~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~---~i~~~d~~ 287 (373)
...-.++++|..|+. ...+ +.|..+|+.++.. ...+..+.... . .|+++++.|+....++ .+.+||+.
T Consensus 282 ~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-~--~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 282 ADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV-L--TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-E--EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred ceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE-E--EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 222236677776654 4333 5799999987654 34555555333 3 8888898887766544 57888876
Q ss_pred ccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCC----CcEEEEEccCceE
Q 017314 288 SLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSAD----GSVYIWSISKADI 337 (373)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~D----g~i~iwd~~~~~~ 337 (373)
... ...+....... .....++|++..|+....+ ++|+.||+.+++.
T Consensus 359 g~~-~~~l~~p~~~~---~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 359 GKR-VREVALPGLGS---VSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp SCE-EEEECCSSSSE---EEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CCe-eEEeecCCCce---EEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 432 23332221111 1123346777766554444 7899999987754
No 220
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.46 E-value=2.3e-11 Score=119.00 Aligned_cols=259 Identities=12% Similarity=0.120 Sum_probs=168.2
Q ss_pred CCCEEEEeeCCCcEEEEeCCCCceeeecccc--c---cceEE-EEEcCCCCEEEEEe------CCCcEEEEEcCCCeeEE
Q 017314 99 NSARLISGGQDKSIKLWDTNTGSLSSTLYGC--L---GSVLD-LAITHDNRSVIAAS------SSNNLYVWDVNSGRVRH 166 (373)
Q Consensus 99 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--~---~~v~~-~~~~~~~~~l~s~s------~d~~i~iwd~~~~~~~~ 166 (373)
++..++.++.|+.|..+|..+|+.+-.+... . ..+.+ ..+ .++ .++.++ .++.|+.||..+|+.+.
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W 197 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV-VNG-KVVIGNGGAEFGVRGYVTAYDAETGKEAW 197 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE-ECC-EEEEEeCCCccCCCCEEEEEECCCCcEEE
Confidence 3568899999999999999999876444321 0 11110 011 144 444443 36899999999999887
Q ss_pred EeecCC-C-----------------------------cE-EEEEEeeCCCCEEEEEeCCCc-------------------
Q 017314 167 TLTGHT-D-----------------------------KV-CAVDVSKISSRHVVSAAYDRT------------------- 196 (373)
Q Consensus 167 ~~~~h~-~-----------------------------~v-~~~~~~~~~~~~~~s~s~D~~------------------- 196 (373)
.+..-. + .+ ..+.+.+ ..+.++.++.+++
T Consensus 198 ~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~ 276 (689)
T 1yiq_A 198 RFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSS 276 (689)
T ss_dssp EEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCCTTTTE
T ss_pred EecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeee
Confidence 664210 0 00 1345555 4567887877763
Q ss_pred EEEEEccCCeeeeEEeec-C---------ceeEEEEccCCC---EEEEEeCCCcEEEEECCCCeeeEEEeccccc-----
Q 017314 197 LKVWDLHKGYCVNTIIFH-S---------NCNALAFSMDGQ---TIFSGHIDGNLRLWDIQTGKLLSEVAAHSLA----- 258 (373)
Q Consensus 197 i~vwd~~~~~~~~~~~~~-~---------~~~~~~~~~~g~---~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~----- 258 (373)
|..||..+|+.+-.+... . ......+..+|+ .++.++.+|.++++|..+|+.+.........
T Consensus 277 v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 277 IVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccccccccccccc
Confidence 999999999887766532 1 111222233665 7889999999999999999987443221100
Q ss_pred ---------------------------------ceEEEEEcCCCCEEEEeeC----------------------------
Q 017314 259 ---------------------------------AVTSISLSRSGNIILTSGR---------------------------- 277 (373)
Q Consensus 259 ---------------------------------~v~~~~~~~~~~~l~s~~~---------------------------- 277 (373)
.-..++|+|+..++++...
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 0112688888887776532
Q ss_pred -----------------CCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEE
Q 017314 278 -----------------DNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRT 340 (373)
Q Consensus 278 -----------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~ 340 (373)
++.+..||+.+++..-++....... ...+...+.+++.|+.||.|+.||..+|+.+-.
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~~-----~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~ 511 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVTIFN-----GGTLSTAGNLVFEGSADGRVIAYAADTGEKLWE 511 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESSSCC-----CCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCCCcc-----CccceECCCEEEEECCCCcEEEEECCCCcccee
Confidence 3678899999888766654432211 123455778899999999999999999999988
Q ss_pred eccCCcc-EEEEEEcCCCC-cEEEEeC
Q 017314 341 LKEHTAP-VLSCSWSGLGK-PLASADK 365 (373)
Q Consensus 341 l~~h~~~-V~~~~~s~~g~-~l~s~s~ 365 (373)
++...+. ..-+.|+.+|+ |++..+.
T Consensus 512 ~~~~~~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 512 QPAASGVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp EECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred eeCCCCcccCceEEEECCEEEEEEEec
Confidence 7644322 23467788887 5555443
No 221
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.45 E-value=1.3e-11 Score=120.49 Aligned_cols=268 Identities=14% Similarity=0.179 Sum_probs=184.7
Q ss_pred CCEEEEeeCCCcEEEEeCCCCceeeecccccc-----------ceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q 017314 100 SARLISGGQDKSIKLWDTNTGSLSSTLYGCLG-----------SVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 100 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 168 (373)
+..|+.++.++.|.-+|..+|+.+-.+..... ....+++ ++..++.++.|+.+..+|..+|+.+..+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 56777888899999999999987644332110 0112233 4678889999999999999999998887
Q ss_pred ecC-C----CcEEE-EEEeeCCCCEEEEEeC------CCcEEEEEccCCeeeeEEeecCc--------------------
Q 017314 169 TGH-T----DKVCA-VDVSKISSRHVVSAAY------DRTLKVWDLHKGYCVNTIIFHSN-------------------- 216 (373)
Q Consensus 169 ~~h-~----~~v~~-~~~~~~~~~~~~s~s~------D~~i~vwd~~~~~~~~~~~~~~~-------------------- 216 (373)
..+ . ..+.+ ..+ ....++.++. ++.|..+|..+|+.+-.+.....
T Consensus 155 ~~~~~~~~~~~~~~~p~v---~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~ 231 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRV---FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDP 231 (677)
T ss_dssp ETTTTCCSSCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCG
T ss_pred cCCcCcCcCcccccCcEE---ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccc
Confidence 755 1 11211 111 1334555543 79999999999988766543211
Q ss_pred -------------eeEEEEccCCCEEEEEeCCC-------------------cEEEEECCCCeeeEEEeccc--------
Q 017314 217 -------------CNALAFSMDGQTIFSGHIDG-------------------NLRLWDIQTGKLLSEVAAHS-------- 256 (373)
Q Consensus 217 -------------~~~~~~~~~g~~l~sg~~dg-------------------~i~iwd~~~~~~~~~~~~~~-------- 256 (373)
...++++|++..++.++.++ .|..+|..+|+.+..+....
T Consensus 232 ~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~ 311 (677)
T 1kb0_A 232 SGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTS 311 (677)
T ss_dssp GGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCC
T ss_pred cCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCccccccc
Confidence 13578899999999887664 49999999999887765421
Q ss_pred ccceEEEEEcCCC---CEEEEeeCCCeEEEEEccccceeeeeeecC-----------Ce--------------------e
Q 017314 257 LAAVTSISLSRSG---NIILTSGRDNLHNLFDIRSLEVCGSLRATG-----------NR--------------------V 302 (373)
Q Consensus 257 ~~~v~~~~~~~~~---~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~-----------~~--------------------~ 302 (373)
......+....+| ..++.++.++.+.++|..+++.+..+.... .. -
T Consensus 312 ~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G 391 (677)
T 1kb0_A 312 TQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYG 391 (677)
T ss_dssp CSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTC
T ss_pred CCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccc
Confidence 1122333344467 688999999999999999988765543211 00 0
Q ss_pred ecCeeeeEECCCCcEEEEEeCC-------------------------------------------CcEEEEEccCceEEE
Q 017314 303 ASNWSRSCISPDESYVAAGSAD-------------------------------------------GSVYIWSISKADIVR 339 (373)
Q Consensus 303 ~~~~~~~~~s~~~~~l~sgs~D-------------------------------------------g~i~iwd~~~~~~~~ 339 (373)
...|...+++|++.++.+++.+ |.|..||+.+++.+-
T Consensus 392 ~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W 471 (677)
T 1kb0_A 392 AHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAW 471 (677)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEE
T ss_pred ccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEe
Confidence 1234567889998888776432 789999999999877
Q ss_pred EeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 340 TLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 340 ~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
.+. +..++.+..++.++..++.++.||.+++|+
T Consensus 472 ~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 472 SVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYH 504 (677)
T ss_dssp EEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred ecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEE
Confidence 665 334455566777888888899999999875
No 222
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.45 E-value=5.2e-12 Score=113.45 Aligned_cols=257 Identities=8% Similarity=-0.035 Sum_probs=167.3
Q ss_pred ceEEecCccCcEEEEEEcCCCCEEEEee----------CCCcEEEEeCCCCceeeecccc-------ccceEEEEEcCCC
Q 017314 80 CKHKINAHEGGCASILFEYNSARLISGG----------QDKSIKLWDTNTGSLSSTLYGC-------LGSVLDLAITHDN 142 (373)
Q Consensus 80 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s----------~D~~v~iwd~~~~~~~~~~~~~-------~~~v~~~~~~~~~ 142 (373)
...++..-..+ .+.|+||+++++.+. .+++|.+||+.+++...++... ......++|+|||
T Consensus 58 v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDG 135 (368)
T 1mda_H 58 TLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASS 135 (368)
T ss_dssp EEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTS
T ss_pred EEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCC
Confidence 34444433345 699999999998886 3789999999999998887533 1235578999999
Q ss_pred CEEEEEeC--CCcEEE--EEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC-----Ceeee----
Q 017314 143 RSVIAASS--SNNLYV--WDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK-----GYCVN---- 209 (373)
Q Consensus 143 ~~l~s~s~--d~~i~i--wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~-----~~~~~---- 209 (373)
++++.+.. +..+.+ +|+.+ +..+..- .. ..+.|.....+++.+.|+++.+.|+.+ ++...
T Consensus 136 k~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~ 208 (368)
T 1mda_H 136 ACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTG 208 (368)
T ss_dssp SCEEEEECSSSCEEEEEETTTEE---EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCT
T ss_pred CEEEEEccCCCCeEEEEEEchhh---ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeee
Confidence 99998875 457888 98876 3333211 11 112343445667777899998888876 33221
Q ss_pred EEeecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCe--eeEEEecc-------c--ccceEEEEEcCCCCEEEEeeC-
Q 017314 210 TIIFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGK--LLSEVAAH-------S--LAAVTSISLSRSGNIILTSGR- 277 (373)
Q Consensus 210 ~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~--~~~~~~~~-------~--~~~v~~~~~~~~~~~l~s~~~- 277 (373)
.+....... + .+++..++-.+. +.|.+.|+.+.. .+..+... . ......+.++|+++.++.+..
T Consensus 209 ~i~vg~~P~--~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~ 284 (368)
T 1mda_H 209 AQNCSSQAA--Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVE 284 (368)
T ss_dssp TSCBCSCCE--E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEE
T ss_pred eeeCCCCcc--c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEecc
Confidence 011111112 3 666666666566 899999996532 22222111 0 011112689999987776432
Q ss_pred --------CCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCc-EEEEEe-CCCcEEEEEccCceEEEEeccCCcc
Q 017314 278 --------DNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDES-YVAAGS-ADGSVYIWSISKADIVRTLKEHTAP 347 (373)
Q Consensus 278 --------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~-~l~sgs-~Dg~i~iwd~~~~~~~~~l~~h~~~ 347 (373)
++.+.++|+.+.+.+..+...... ..++++|||+ ++++.. .+++|.++|+.+++.++++.....+
T Consensus 285 ~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p-----~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P 359 (368)
T 1mda_H 285 HSRSCLAAAENTSSVTASVGQTSGPISNGHDS-----DAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP 359 (368)
T ss_dssp CSSCTTSCEEEEEEEESSSCCEEECCEEEEEE-----CEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCC
T ss_pred ccCcccccCCCEEEEECCCCeEEEEEECCCCc-----ceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCC
Confidence 234559999999888877644322 2367899998 456666 5999999999999999998765544
Q ss_pred EEEEEEcC
Q 017314 348 VLSCSWSG 355 (373)
Q Consensus 348 V~~~~~s~ 355 (373)
..+++.+
T Consensus 360 -~~i~~~~ 366 (368)
T 1mda_H 360 -ESLSVQN 366 (368)
T ss_dssp -CEEECCC
T ss_pred -CEEEeec
Confidence 4666654
No 223
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.45 E-value=2.9e-10 Score=101.10 Aligned_cols=222 Identities=15% Similarity=0.110 Sum_probs=141.6
Q ss_pred EEEEEEcCCCC-EEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q 017314 91 CASILFEYNSA-RLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLT 169 (373)
Q Consensus 91 v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 169 (373)
..+..|+++++ .+++...++.|..||..++.... + .....+.+++++++++++++. . ..|.+||..+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~-~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~ 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTV-H-ALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAE 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-E-ECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEEC
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-E-ECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEee
Confidence 45678999754 56666678999999998875432 2 234578899999999877654 3 449999998887543322
Q ss_pred c---C-CCcEEEEEEeeCCCCEEEEEeCC----CcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEE-EeCCCcEEE
Q 017314 170 G---H-TDKVCAVDVSKISSRHVVSAAYD----RTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFS-GHIDGNLRL 240 (373)
Q Consensus 170 ~---h-~~~v~~~~~~~~~~~~~~s~s~D----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s-g~~dg~i~i 240 (373)
. . ...+..+.+++ ++++.++...+ +...||.+.++............+.++|+|||+.++. .+.++.|.+
T Consensus 127 ~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~ 205 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNRLMR 205 (326)
T ss_dssp SSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCEEEE
T ss_pred CCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEeCCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEE
Confidence 1 1 23577888887 45655544321 2334444334543322222244678999999987754 455789999
Q ss_pred EECC--CC-ee-----eEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEEC
Q 017314 241 WDIQ--TG-KL-----LSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCIS 312 (373)
Q Consensus 241 wd~~--~~-~~-----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 312 (373)
||+. ++ .. ...+... ......++++++|++.++...++.+..||. ..+....+...... ...++|+
T Consensus 206 ~d~~~~~Gl~~~~~~~~~~~~~~-~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~----~~~~af~ 279 (326)
T 2ghs_A 206 VPLDARTGLPTGKAEVFIDSTGI-KGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQ----TTCPAFI 279 (326)
T ss_dssp EEBCTTTCCBSSCCEEEEECTTS-SSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSB----EEEEEEE
T ss_pred EEcccccCCcccCceEEEECCCC-CCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCC----cEEEEEe
Confidence 9986 55 32 1122111 245678999999998888777788999998 45554554433221 2346676
Q ss_pred -CCCcEEEEEeC
Q 017314 313 -PDESYVAAGSA 323 (373)
Q Consensus 313 -~~~~~l~sgs~ 323 (373)
|++..|..++.
T Consensus 280 g~d~~~L~vt~~ 291 (326)
T 2ghs_A 280 GPDASRLLVTSA 291 (326)
T ss_dssp STTSCEEEEEEB
T ss_pred cCCCCEEEEEec
Confidence 88776654443
No 224
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.43 E-value=1.3e-11 Score=110.86 Aligned_cols=247 Identities=11% Similarity=0.015 Sum_probs=162.6
Q ss_pred cEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe----------CCCcEEEEEcCCCeeEEEeecC-------CC
Q 017314 111 SIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS----------SSNNLYVWDVNSGRVRHTLTGH-------TD 173 (373)
Q Consensus 111 ~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s----------~d~~i~iwd~~~~~~~~~~~~h-------~~ 173 (373)
+|.+.|..+++.+.++.....+ .++++||+++++.+. .+++|.+||+.+++.+.++... ..
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999888766666 699999999988886 3789999999999999888643 12
Q ss_pred cEEEEEEeeCCCCEEEEEeC--CCcEEE--EEccCCeeeeEEeecCceeEEEEccCCC-EEEEEeCCCcEEEEECCC---
Q 017314 174 KVCAVDVSKISSRHVVSAAY--DRTLKV--WDLHKGYCVNTIIFHSNCNALAFSMDGQ-TIFSGHIDGNLRLWDIQT--- 245 (373)
Q Consensus 174 ~v~~~~~~~~~~~~~~s~s~--D~~i~v--wd~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sg~~dg~i~iwd~~~--- 245 (373)
....+.++| ++++++.+.. +..+.+ +|..+ +..+.... + ..+.|+|. .+++.+.||.+.+.|+.+
T Consensus 125 ~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~-~--~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 125 RVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS-C--FHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS-C--CCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred CcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC-c--eEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 345677887 5666766654 467888 99877 34443221 1 22345543 345666788888888876
Q ss_pred --CeeeEE----EecccccceEEEEEcCCCCEEEEeeCCCeEEEEEcccc--ceeeeeeec------CCeeecCeeeeEE
Q 017314 246 --GKLLSE----VAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSL--EVCGSLRAT------GNRVASNWSRSCI 311 (373)
Q Consensus 246 --~~~~~~----~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~--~~~~~~~~~------~~~~~~~~~~~~~ 311 (373)
++.... +.... .+. . .+++..++..+. +.+.+.|.... .....+... .......+..+++
T Consensus 198 ~~~~v~~~~t~~i~vg~-~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~ 271 (368)
T 1mda_H 198 AAGIVGAQCTGAQNCSS-QAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAK 271 (368)
T ss_dssp CCEECCCCSCTTSCBCS-CCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEE
T ss_pred cCCeEEEEeeeeeeCCC-Ccc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEE
Confidence 443311 11111 222 3 555665555555 88889998542 222222111 1111122223568
Q ss_pred CCCCcEEEEEeC---------CCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCc-EEEEe-CCCeEEEcC
Q 017314 312 SPDESYVAAGSA---------DGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKP-LASAD-KNGVVCVWT 373 (373)
Q Consensus 312 s~~~~~l~sgs~---------Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~-l~s~s-~dg~i~iW~ 373 (373)
+||++++..+.. ++.+.++|+.+.+.+..+.... ....++|+|||++ +++.. .++.|.++|
T Consensus 272 s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 272 LKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp ETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred cCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 999987776533 2356699999999988876443 4689999999984 56666 589998874
No 225
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.42 E-value=6.2e-11 Score=110.87 Aligned_cols=217 Identities=12% Similarity=0.129 Sum_probs=153.9
Q ss_pred CCCEEEEEeCC-CcEEEEEcCCCeeEEEeecC-CCcEEEEEEee-CCCCEEEEEe------------------CCCcEEE
Q 017314 141 DNRSVIAASSS-NNLYVWDVNSGRVRHTLTGH-TDKVCAVDVSK-ISSRHVVSAA------------------YDRTLKV 199 (373)
Q Consensus 141 ~~~~l~s~s~d-~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~-~~~~~~~s~s------------------~D~~i~v 199 (373)
||++++....+ ..|.+.|+.+.++...+.-- ......+++.. .++.+++.++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 88888776665 46999999999988755422 23466777632 3677777764 3568999
Q ss_pred EEccCCeeeeEEeecCceeEEEEccCCCEEEEEeCCC--------------------------------------cEEEE
Q 017314 200 WDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGHIDG--------------------------------------NLRLW 241 (373)
Q Consensus 200 wd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~dg--------------------------------------~i~iw 241 (373)
.|..+.+...++....+...++++|+|+++++.+.+. .|.+.
T Consensus 180 ID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp EETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred EECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 9999998888887766777788999999999888553 47777
Q ss_pred ECCC--Cee-eEEEecccccceEEEEEcCCCCEEEEee-CCCeEEEEEccccc------------eeeeeeecCCeeecC
Q 017314 242 DIQT--GKL-LSEVAAHSLAAVTSISLSRSGNIILTSG-RDNLHNLFDIRSLE------------VCGSLRATGNRVASN 305 (373)
Q Consensus 242 d~~~--~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~d~~i~~~d~~~~~------------~~~~~~~~~~~~~~~ 305 (373)
|.++ ++. +..+... ....++.++|||+++++++ .++.+.++|+.+.+ ...++..-..+
T Consensus 260 D~~~~~~~~~~~~Ipvg--~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP---- 333 (595)
T 1fwx_A 260 DGRKEASSLFTRYIPIA--NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP---- 333 (595)
T ss_dssp ECSGGGCCSSEEEEEEE--SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE----
T ss_pred eCcccCCceeEEEEecC--CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc----
Confidence 7776 444 4444432 3566799999999877665 67899999998753 22222211111
Q ss_pred eeeeEECCCCcEEEEEeCCCcEEEEEccC----------ceEEEEeccCCccE-----EEEEEcCCCCcEEEEe
Q 017314 306 WSRSCISPDESYVAAGSADGSVYIWSISK----------ADIVRTLKEHTAPV-----LSCSWSGLGKPLASAD 364 (373)
Q Consensus 306 ~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~----------~~~~~~l~~h~~~V-----~~~~~s~~g~~l~s~s 364 (373)
...+|+|+|...++.--|+.|.+||+.+ ...+..+.-|..+- .+..++|||++|+++.
T Consensus 334 -~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 334 -LHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp -EEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred -ceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 2357999995455677899999999987 56677777665542 2235689999998863
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.41 E-value=7.9e-11 Score=114.95 Aligned_cols=256 Identities=11% Similarity=0.107 Sum_probs=170.6
Q ss_pred CCCEEEEeeCCCcEEEEeCCCCceeeecccc-c----cceEE-EEEcCCCCEEEEEeC------CCcEEEEEcCCCeeEE
Q 017314 99 NSARLISGGQDKSIKLWDTNTGSLSSTLYGC-L----GSVLD-LAITHDNRSVIAASS------SNNLYVWDVNSGRVRH 166 (373)
Q Consensus 99 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~----~~v~~-~~~~~~~~~l~s~s~------d~~i~iwd~~~~~~~~ 166 (373)
++..|+.++.|+.|..+|..+|+.+-.+... . ..+.+ ..+ .+..++.++. ++.|+.+|..+|+.+.
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEE
Confidence 4678899999999999999999887555433 1 11111 111 2345555543 6899999999999887
Q ss_pred EeecCCCc--------------------------------EEEEEEeeCCCCEEEEEeCCC-------------------
Q 017314 167 TLTGHTDK--------------------------------VCAVDVSKISSRHVVSAAYDR------------------- 195 (373)
Q Consensus 167 ~~~~h~~~--------------------------------v~~~~~~~~~~~~~~s~s~D~------------------- 195 (373)
.+...... ...+.+.+ ..+.++.+..++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~ 283 (677)
T 1kb0_A 205 RWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLA 283 (677)
T ss_dssp EEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTT
T ss_pred EeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCCCeeeE
Confidence 76542211 01345555 456777666553
Q ss_pred cEEEEEccCCeeeeEEeecC----------ceeEEEEccCC---CEEEEEeCCCcEEEEECCCCeeeEEEeccccc----
Q 017314 196 TLKVWDLHKGYCVNTIIFHS----------NCNALAFSMDG---QTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLA---- 258 (373)
Q Consensus 196 ~i~vwd~~~~~~~~~~~~~~----------~~~~~~~~~~g---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~---- 258 (373)
+|..+|..+|+.+-.+.... ....+....+| ..++.++.+|.+.++|..+|+.+..+......
T Consensus 284 sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 284 SIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccc
Confidence 59999999998876665321 12233344577 67899999999999999999988766432100
Q ss_pred ------ce------------------------EEEEEcCCCCEEEEeeCC------------------------------
Q 017314 259 ------AV------------------------TSISLSRSGNIILTSGRD------------------------------ 278 (373)
Q Consensus 259 ------~v------------------------~~~~~~~~~~~l~s~~~d------------------------------ 278 (373)
.+ ..++++|+..++++...+
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 01 146889988888775431
Q ss_pred -------------CeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCC
Q 017314 279 -------------NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHT 345 (373)
Q Consensus 279 -------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~ 345 (373)
+.+..||+.+++..-++...... + ...+..++.+++.|+.||.+++||..+++.+..+.-..
T Consensus 444 ~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~~~----~-~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVSPW----N-GGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEECSSCCCSCCEEEEEEEETTTTEEEEEEEESSSC----C-CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cccccccCCCCCccEEEEEeCCCCcEEeecCCCCCC----c-CcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 67889999888776555432211 1 12345677888889999999999999999998886433
Q ss_pred -ccEEEEEEcCCCC-cEEE
Q 017314 346 -APVLSCSWSGLGK-PLAS 362 (373)
Q Consensus 346 -~~V~~~~~s~~g~-~l~s 362 (373)
....-+.|+++|+ +++.
T Consensus 519 ~~~~~p~~y~~~G~~~v~~ 537 (677)
T 1kb0_A 519 GVVAAPSTYMVDGRQYVSV 537 (677)
T ss_dssp CCCSCCEEEEETTEEEEEE
T ss_pred CcccCCEEEEeCCEEEEEE
Confidence 2223456778887 4444
No 227
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.41 E-value=3.4e-11 Score=117.73 Aligned_cols=271 Identities=13% Similarity=0.173 Sum_probs=180.2
Q ss_pred CCEEEEeeCCCcEEEEeCCCCceeeecccccc----------ce-EEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q 017314 100 SARLISGGQDKSIKLWDTNTGSLSSTLYGCLG----------SV-LDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 100 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~----------~v-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 168 (373)
+..|+.++.++.|.-+|..+|+.+-.+..... .+ ..+++ ++..++.++.|+.+..+|..+|+.+..+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 66788888899999999999987654432211 00 11222 4568889999999999999999988776
Q ss_pred ecC--CCcEEEEEEee-CCCCEEEEEe------CCCcEEEEEccCCeeeeEEeecC------------------------
Q 017314 169 TGH--TDKVCAVDVSK-ISSRHVVSAA------YDRTLKVWDLHKGYCVNTIIFHS------------------------ 215 (373)
Q Consensus 169 ~~h--~~~v~~~~~~~-~~~~~~~s~s------~D~~i~vwd~~~~~~~~~~~~~~------------------------ 215 (373)
... ......+...| .....++.++ .++.|..||..+|+.+-.+....
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 542 11100000001 0123444443 37899999999998876654210
Q ss_pred --------ceeEEEEccCCCEEEEEeCCCc-------------------EEEEECCCCeeeEEEeccc--------ccce
Q 017314 216 --------NCNALAFSMDGQTIFSGHIDGN-------------------LRLWDIQTGKLLSEVAAHS--------LAAV 260 (373)
Q Consensus 216 --------~~~~~~~~~~g~~l~sg~~dg~-------------------i~iwd~~~~~~~~~~~~~~--------~~~v 260 (373)
....++++|++..++.++.++. |..||..+|+.+..+.... ....
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~ 307 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHM 307 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCc
Confidence 0125788998899999888764 9999999999988775421 0112
Q ss_pred EEEEEcCCCC---EEEEeeCCCeEEEEEccccceeeeeeecC-----------------------------------Cee
Q 017314 261 TSISLSRSGN---IILTSGRDNLHNLFDIRSLEVCGSLRATG-----------------------------------NRV 302 (373)
Q Consensus 261 ~~~~~~~~~~---~l~s~~~d~~i~~~d~~~~~~~~~~~~~~-----------------------------------~~~ 302 (373)
....+..+|+ .++.++.++.+.++|..+++.+....... ..-
T Consensus 308 ~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~G 387 (689)
T 1yiq_A 308 ILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWG 387 (689)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTC
T ss_pred EEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCccc
Confidence 2222233554 78889999999999999888763322110 001
Q ss_pred ecCeeeeEECCCCcEEEEEeC---------------------------------------------CCcEEEEEccCceE
Q 017314 303 ASNWSRSCISPDESYVAAGSA---------------------------------------------DGSVYIWSISKADI 337 (373)
Q Consensus 303 ~~~~~~~~~s~~~~~l~sgs~---------------------------------------------Dg~i~iwd~~~~~~ 337 (373)
...|...+++|+..++.+++. +|.|+.||+.+++.
T Consensus 388 g~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~ 467 (689)
T 1yiq_A 388 AHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA 467 (689)
T ss_dssp SSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE
T ss_pred ccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCe
Confidence 123555788998887776532 37899999999998
Q ss_pred EEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 338 VRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 338 ~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+-.+..+. ++..-.++..|..++.++.||.|+.||
T Consensus 468 ~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D 502 (689)
T 1yiq_A 468 AWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYA 502 (689)
T ss_dssp EEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred EeEccCCC-CccCccceECCCEEEEECCCCcEEEEE
Confidence 87765443 344446666788999999999999885
No 228
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.40 E-value=9.5e-14 Score=125.85 Aligned_cols=188 Identities=17% Similarity=0.115 Sum_probs=112.5
Q ss_pred CCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEE
Q 017314 99 NSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAV 178 (373)
Q Consensus 99 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~ 178 (373)
++..+++++.|+.|+.||..+|+.+-.+.. +.+.+..+..++..+++++.|+.++.||..+|+.+..+..+......
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~- 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ- 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc-
Confidence 578999999999999999999998766654 45555556667777888889999999999998876665544221100
Q ss_pred EEee--CCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEeccc
Q 017314 179 DVSK--ISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHS 256 (373)
Q Consensus 179 ~~~~--~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 256 (373)
.+| ..+..+++|+.|+.+..||..+|+.+..+..+. ...++|++..+++++.|+.|+.||.++|+.+..+....
T Consensus 85 -~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~ 160 (369)
T 2hz6_A 85 -ASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD 160 (369)
T ss_dssp -TCSCC-----CCCCEEEEEEEEECCC-------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE
T ss_pred -cCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc
Confidence 011 024467888899999999999998776655443 23456788899999999999999999998776654321
Q ss_pred ccceEEEEEcCCC---CEEEEeeCCCeEEEEEccccceeeeee
Q 017314 257 LAAVTSISLSRSG---NIILTSGRDNLHNLFDIRSLEVCGSLR 296 (373)
Q Consensus 257 ~~~v~~~~~~~~~---~~l~s~~~d~~i~~~d~~~~~~~~~~~ 296 (373)
.....++++. ..++.++.|+.+..||..+++..-++.
T Consensus 161 ---~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 161 ---YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN 200 (369)
T ss_dssp ---ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE
T ss_pred ---ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec
Confidence 2223344432 456778889999999999887655544
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.40 E-value=4.8e-10 Score=101.59 Aligned_cols=258 Identities=13% Similarity=0.143 Sum_probs=168.4
Q ss_pred CCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcE---
Q 017314 99 NSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKV--- 175 (373)
Q Consensus 99 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v--- 175 (373)
++..++.++.|+.|..+|..+|+..-.............+ .+..++.++.++.+..+|..+++.+..+.......
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~ 179 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLR 179 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----C
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeec
Confidence 4668888999999999999999876444332211111122 24578888999999999999998887765432211
Q ss_pred --EEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCce-----eE---EEEcc--CCCEEEEEeCCCcEEEEEC
Q 017314 176 --CAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNC-----NA---LAFSM--DGQTIFSGHIDGNLRLWDI 243 (373)
Q Consensus 176 --~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~-----~~---~~~~~--~g~~l~sg~~dg~i~iwd~ 243 (373)
..... ....++.++.++.+..+|..+|+.+......... .. +...| .+..++.++.++.+..+|.
T Consensus 180 ~~~~~~~---~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 180 GESAPTT---AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp CCCCCEE---ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEET
T ss_pred CCCCcEE---ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEEC
Confidence 11111 1356788888999999999999876655432110 00 10111 3567888889999999999
Q ss_pred CCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeC
Q 017314 244 QTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSA 323 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~ 323 (373)
.+++.+...... ....+.. ++..+..++.++.+..+|..+++..-........... ...+ .+..|+.++.
T Consensus 257 ~tG~~~w~~~~~---~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~---~~~~--~~~~l~v~~~ 326 (376)
T 3q7m_A 257 RSGQIMWKRELG---SVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLT---SPVL--YNGNLVVGDS 326 (376)
T ss_dssp TTCCEEEEECCC---CEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCC---CCEE--ETTEEEEECT
T ss_pred CCCcEEeeccCC---CCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCccc---CCEE--ECCEEEEEeC
Confidence 999887665432 2334443 3567777888889999999888765443311111111 1112 3567888999
Q ss_pred CCcEEEEEccCceEEEEeccCCccEEE-EEEcCCCCcEEEEeCCCeEEEcC
Q 017314 324 DGSVYIWSISKADIVRTLKEHTAPVLS-CSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 324 Dg~i~iwd~~~~~~~~~l~~h~~~V~~-~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+|.|+++|..+++.+.........+.+ ... .+..|+.++.+|.|..|+
T Consensus 327 ~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 327 EGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 999999999999988766543333321 222 245788889999998774
No 230
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.38 E-value=6.6e-11 Score=116.18 Aligned_cols=232 Identities=15% Similarity=0.122 Sum_probs=144.6
Q ss_pred cccceEEEEEcCCCCEEEEEe-----CCCcEEEEEcCCCeeEEE-eecCCCcEEEEEEeeCCCCEEEEEeCCCc------
Q 017314 129 CLGSVLDLAITHDNRSVIAAS-----SSNNLYVWDVNSGRVRHT-LTGHTDKVCAVDVSKISSRHVVSAAYDRT------ 196 (373)
Q Consensus 129 ~~~~v~~~~~~~~~~~l~s~s-----~d~~i~iwd~~~~~~~~~-~~~h~~~v~~~~~~~~~~~~~~s~s~D~~------ 196 (373)
+...+..++|||||++|+.+. ...+|++||+.+++.+.. +.+. ....++|+ +++.|+.++.|..
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~--k~~~~~Ws--Dg~~l~y~~~~~~~~~~~~ 202 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDV--KFSGISWL--GNEGFFYSSYDKPDGSELS 202 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEE--ESCCCEEE--TTTEEEEEESSCCC-----
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCc--eeccEEEe--CCCEEEEEEecCccccccc
Confidence 445678889999999887433 225799999999986442 2211 12456677 5667777777643
Q ss_pred -------EEEEEccCCeeeeE--EeecC----ceeEEEEccCCCEEEEEe----CCCcEEEEECCCCe-eeEEEeccccc
Q 017314 197 -------LKVWDLHKGYCVNT--IIFHS----NCNALAFSMDGQTIFSGH----IDGNLRLWDIQTGK-LLSEVAAHSLA 258 (373)
Q Consensus 197 -------i~vwd~~~~~~~~~--~~~~~----~~~~~~~~~~g~~l~sg~----~dg~i~iwd~~~~~-~~~~~~~~~~~ 258 (373)
|++|++.++..... +.... ....+.++|||++|+... .++.|.++|+.++. ....+..+. .
T Consensus 203 ~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~-~ 281 (693)
T 3iuj_A 203 ARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDL-D 281 (693)
T ss_dssp --CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSS-S
T ss_pred ccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCC-C
Confidence 99999977643222 21111 256789999999886433 23589999997763 344455443 2
Q ss_pred ceEEEEEcCCCCEE-EEeeCC---CeEEEEEccccce--eeeeeecCCeeecCeeeeEECCCCcEEEEEeC-CC--cEEE
Q 017314 259 AVTSISLSRSGNII-LTSGRD---NLHNLFDIRSLEV--CGSLRATGNRVASNWSRSCISPDESYVAAGSA-DG--SVYI 329 (373)
Q Consensus 259 ~v~~~~~~~~~~~l-~s~~~d---~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~-Dg--~i~i 329 (373)
..... +++++..| +....+ ..+..+|+.+... ...+..+.... . .+++++.+|+.... +| .|++
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~-----~-~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV-----L-TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC-----E-EEEEETTEEEEEEEETTEEEEEE
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE-----E-EEEEECCEEEEEEEECCeeEEEE
Confidence 33333 55666544 444443 5688888876543 12333332221 1 57888888776654 44 6899
Q ss_pred EEccCceEEEEec-cCCccEEEEEEcCCCCcEEEEeCC----CeEEEcC
Q 017314 330 WSISKADIVRTLK-EHTAPVLSCSWSGLGKPLASADKN----GVVCVWT 373 (373)
Q Consensus 330 wd~~~~~~~~~l~-~h~~~V~~~~~s~~g~~l~s~s~d----g~i~iW~ 373 (373)
|++..+. ...+. .+.+.+..++++|++..|+....+ +.|..|+
T Consensus 355 ~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d 402 (693)
T 3iuj_A 355 FDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFE 402 (693)
T ss_dssp ECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred EECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEE
Confidence 9987544 44443 345668888899999877665444 6666653
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.38 E-value=2.6e-13 Score=123.00 Aligned_cols=202 Identities=15% Similarity=0.178 Sum_probs=117.1
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCc--ee
Q 017314 141 DNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSN--CN 218 (373)
Q Consensus 141 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~--~~ 218 (373)
++..+++++.|+.|+.||..+|+.+..+.. +.+.+..+.. ++..+++++.|+.|..||..+|+.+.....+.. +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~ 84 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQ 84 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccc
Confidence 577899999999999999999999888876 4443332322 345677778999999999988876544433211 11
Q ss_pred -EEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeee
Q 017314 219 -ALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRA 297 (373)
Q Consensus 219 -~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~ 297 (373)
+..+. ++..+++|+.|+.|+.||..+|+.+..+..+. ...++|++..+++++.|+.+..||.++++..-.+..
T Consensus 85 ~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~-----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~ 158 (369)
T 2hz6_A 85 ASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF-----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATY 158 (369)
T ss_dssp TCSCC------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEE
T ss_pred cCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC-----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEec
Confidence 11111 35567888899999999999999887765543 234567888999999999999999988776544432
Q ss_pred cCCeeecCeeeeEECCCC---cEEEEEeCCCcEEEEEccCceEEEEeccCCccEE-EEEEcCCCC
Q 017314 298 TGNRVASNWSRSCISPDE---SYVAAGSADGSVYIWSISKADIVRTLKEHTAPVL-SCSWSGLGK 358 (373)
Q Consensus 298 ~~~~~~~~~~~~~~s~~~---~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~-~~~~s~~g~ 358 (373)
.. +...+++++. ..+++++.||.|+.||..+++.+-.+. ...++. ...++++|.
T Consensus 159 ~~------~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 159 FD------YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGL 216 (369)
T ss_dssp EE------ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSC
T ss_pred cc------ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCce
Confidence 11 1112233332 556778899999999999999876665 344554 345666664
No 232
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.37 E-value=3.4e-10 Score=102.58 Aligned_cols=259 Identities=11% Similarity=0.091 Sum_probs=166.2
Q ss_pred CCCEEEEeeCCCcEEEEeCCCCceeeecccc---------ccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q 017314 99 NSARLISGGQDKSIKLWDTNTGSLSSTLYGC---------LGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLT 169 (373)
Q Consensus 99 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~---------~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 169 (373)
++..++.++.++.|..+|..+++.+-..... ...+.+ ....++..++.++.++.+..+|..+|+.+....
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 4678888899999999999999875443321 112222 222346688889999999999999999877665
Q ss_pred cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCce------eEEEEccCCCEEEEEeCCCcEEEEEC
Q 017314 170 GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNC------NALAFSMDGQTIFSGHIDGNLRLWDI 243 (373)
Q Consensus 170 ~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~------~~~~~~~~g~~l~sg~~dg~i~iwd~ 243 (373)
........... ....++.++.++.|..+|..+|+.+......... ..... .+..++.++.++.|..+|.
T Consensus 131 ~~~~~~~~p~~---~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~~~g~l~~~d~ 205 (376)
T 3q7m_A 131 VAGEALSRPVV---SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGGDNGRVSAVLM 205 (376)
T ss_dssp CSSCCCSCCEE---ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECCTTTEEEEEET
T ss_pred CCCceEcCCEE---ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEcCCCEEEEEEC
Confidence 44322211112 2457888899999999999999877666543322 11122 2456788888999999999
Q ss_pred CCCeeeEEEecccccc------eEEEEEcC--CCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCC
Q 017314 244 QTGKLLSEVAAHSLAA------VTSISLSR--SGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDE 315 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~------v~~~~~~~--~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 315 (373)
.+++.+.......... +..+...| .+..++.++.++.+..+|..+++..-...... ... ...++
T Consensus 206 ~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~------~~~--~~~~~ 277 (376)
T 3q7m_A 206 EQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRELGS------VND--FIVDG 277 (376)
T ss_dssp TTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECCCC------EEE--EEEET
T ss_pred CCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccCCC------CCC--ceEEC
Confidence 9998877665331100 00011111 24567777788999999998877654433211 111 22246
Q ss_pred cEEEEEeCCCcEEEEEccCceEEEEeccC-CccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 316 SYVAAGSADGSVYIWSISKADIVRTLKEH-TAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 316 ~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h-~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
..|..++.+|.|..+|..+++.+-..... ...+..... .+..|+.++.+|.|..++
T Consensus 278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEE
Confidence 67888888999999999999887665421 112222222 246777888888887763
No 233
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=3.1e-11 Score=108.16 Aligned_cols=223 Identities=13% Similarity=0.053 Sum_probs=141.3
Q ss_pred cceEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCeeEEEe-------ecCCCcEEEEEEeeCCCCEEEEEeC-----CCc
Q 017314 131 GSVLDLAITHDNRSVIAASS--SNNLYVWDVNSGRVRHTL-------TGHTDKVCAVDVSKISSRHVVSAAY-----DRT 196 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~-------~~h~~~v~~~~~~~~~~~~~~s~s~-----D~~ 196 (373)
..+..++++++|+.+++... ++.++||.+.+++.. .+ .+|...+..+.+.+. +++.++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~-g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGN-GIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSS-SEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCC-CcEEEEcCCCCcCCCCe
Confidence 56788999999998888642 343566665555533 22 234567889999873 554454433 578
Q ss_pred EEEEEccCCeeeeEEeec-------CceeEEEEccCCCEE-EEEe---CCCcEEEEECCCCeeeEEEecccccceEEEEE
Q 017314 197 LKVWDLHKGYCVNTIIFH-------SNCNALAFSMDGQTI-FSGH---IDGNLRLWDIQTGKLLSEVAAHSLAAVTSISL 265 (373)
Q Consensus 197 i~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~g~~l-~sg~---~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (373)
|.+||+.+++.+..+..+ ...+.++++|++..+ ++.. .++.|.+||+.+++....+..|.........+
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 999999999877766543 135889999865555 4544 67899999999888766554331110001233
Q ss_pred cCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCC-cEEEEEcc---Cce-----
Q 017314 266 SRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADG-SVYIWSIS---KAD----- 336 (373)
Q Consensus 266 ~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg-~i~iwd~~---~~~----- 336 (373)
.++|..+.+.+.++.++.|... ...++++|||++|..+..++ .|+.++.. .+.
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~------------------~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~ 236 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLG------------------VNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAE 236 (343)
T ss_dssp EETTEECBEECTTSCEECCCCC------------------EEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHH
T ss_pred eECCEEEEeccCCCceeceecc------------------cceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhh
Confidence 4456666666666666544210 12367999999888887666 44444432 110
Q ss_pred EEE--EeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 337 IVR--TLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 337 ~~~--~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
... ...++.+....++++++|.++++...++.|.+|+
T Consensus 237 ~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d 275 (343)
T 2qe8_A 237 LGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVIT 275 (343)
T ss_dssp HHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEE
T ss_pred hhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEE
Confidence 000 1112334456799999999889888899999884
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.30 E-value=1.3e-08 Score=87.53 Aligned_cols=242 Identities=7% Similarity=-0.008 Sum_probs=150.3
Q ss_pred CcEEEEeCCCCcee-----eeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeC
Q 017314 110 KSIKLWDTNTGSLS-----STLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKI 183 (373)
Q Consensus 110 ~~v~iwd~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~ 183 (373)
+.|+.++++..... ..+......+..++++++++.|+.+. ..+.|.++++.++.....+.........+++.+.
T Consensus 10 ~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~ 89 (267)
T 1npe_A 10 GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHL 89 (267)
T ss_dssp EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETT
T ss_pred CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEec
Confidence 47888887654321 11111223567899999877666555 5678999999776544444333346678888875
Q ss_pred CCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCCEEEEEeC---CCcEEEEECCCCeeeEEEecccccc
Q 017314 184 SSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQTIFSGHI---DGNLRLWDIQTGKLLSEVAAHSLAA 259 (373)
Q Consensus 184 ~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~sg~~---dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (373)
.+...++-...+.|.++++............ .....++++|++..|+.+.. .+.|..+++... ....+.......
T Consensus 90 ~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~ 168 (267)
T 1npe_A 90 GRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGL 168 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSC
T ss_pred CCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCC
Confidence 5555666667789999998644322112112 35788999997766665544 368888887543 233332222246
Q ss_pred eEEEEEcCCCCEE-EEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEE
Q 017314 260 VTSISLSRSGNII-LTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIV 338 (373)
Q Consensus 260 v~~~~~~~~~~~l-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~ 338 (373)
...+++++++..| ++....+.|..+|.........+..... +. .+++. .+.++++....+.|.++|..+++.+
T Consensus 169 P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~----P~-gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 169 PNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQY----PF-AVTSY-GKNLYYTDWKTNSVIAMDLAISKEM 242 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCS----EE-EEEEE-TTEEEEEETTTTEEEEEETTTTEEE
T ss_pred CcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCC----ce-EEEEe-CCEEEEEECCCCeEEEEeCCCCCce
Confidence 7889999987655 4555668899999875432222221111 11 12333 3444455556789999999999988
Q ss_pred EEeccCC-ccEEEEEEcCCCC
Q 017314 339 RTLKEHT-APVLSCSWSGLGK 358 (373)
Q Consensus 339 ~~l~~h~-~~V~~~~~s~~g~ 358 (373)
..+.... .....+++.|++.
T Consensus 243 ~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 243 DTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEECCSSCCCCCCEEEECSCC
T ss_pred EEEccccccccceeeecCccC
Confidence 8876433 2357888888865
No 235
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.27 E-value=4.1e-09 Score=95.45 Aligned_cols=223 Identities=17% Similarity=0.157 Sum_probs=147.6
Q ss_pred CCCCEEE-EeeCCCcEEEEeCCCC----ceeeecc------c-cccceEEEEEcCCCCEEEEEeCC------CcEEEEEc
Q 017314 98 YNSARLI-SGGQDKSIKLWDTNTG----SLSSTLY------G-CLGSVLDLAITHDNRSVIAASSS------NNLYVWDV 159 (373)
Q Consensus 98 ~~~~~l~-s~s~D~~v~iwd~~~~----~~~~~~~------~-~~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~ 159 (373)
.+.++|+ +|..+++|.++|+.+. +...++. . .......+.+.|+| .++++..+ +.|.+.|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7777665 4557889999999765 4455442 1 11245667889999 77776666 78999999
Q ss_pred CCCeeEEEeecCCCc---EEEEEEeeCCCCEEEEEe-------------------CCCcEEEEEccCCeeeeEEeec---
Q 017314 160 NSGRVRHTLTGHTDK---VCAVDVSKISSRHVVSAA-------------------YDRTLKVWDLHKGYCVNTIIFH--- 214 (373)
Q Consensus 160 ~~~~~~~~~~~h~~~---v~~~~~~~~~~~~~~s~s-------------------~D~~i~vwd~~~~~~~~~~~~~--- 214 (373)
.+.+.+.++..-..+ -..+-++| +.+.+++.. .+.+|.+||+.+++.+.++...
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 999998888632222 23355666 566777774 3789999999998888877664
Q ss_pred CceeEEEE--ccCCCEEEEEe------CCCcEEEEECCCCee--eEEE--eccc---------------ccceEEEEEcC
Q 017314 215 SNCNALAF--SMDGQTIFSGH------IDGNLRLWDIQTGKL--LSEV--AAHS---------------LAAVTSISLSR 267 (373)
Q Consensus 215 ~~~~~~~~--~~~g~~l~sg~------~dg~i~iwd~~~~~~--~~~~--~~~~---------------~~~v~~~~~~~ 267 (373)
.....+.| +|+|++++.++ .+++|.+|....++. .+.+ .... ......|.+++
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 22444555 99999998776 566887766544421 1111 1100 13467899999
Q ss_pred CCCEEEEeeC-CCeEEEEEccc---cceeeeeeecCC----------eeecCeeeeEECCCCcEEEEEe
Q 017314 268 SGNIILTSGR-DNLHNLFDIRS---LEVCGSLRATGN----------RVASNWSRSCISPDESYVAAGS 322 (373)
Q Consensus 268 ~~~~l~s~~~-d~~i~~~d~~~---~~~~~~~~~~~~----------~~~~~~~~~~~s~~~~~l~sgs 322 (373)
||++|.++.. .+.|.+||+.. .+.++.+...+. .....-..+.++|||++|.++.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 9999887765 57899999852 344444433211 0000113367999999999888
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.27 E-value=6.1e-10 Score=98.70 Aligned_cols=261 Identities=15% Similarity=0.104 Sum_probs=164.4
Q ss_pred cCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEE
Q 017314 88 EGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHT 167 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~ 167 (373)
...+.++...+++. |..++.+ |..+|. +++....+...........+. +..++.++.++.+..+|.. ++....
T Consensus 59 ~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~ 131 (330)
T 3hxj_A 59 EIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWR 131 (330)
T ss_dssp GEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEE
T ss_pred CCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEE
Confidence 34456777776664 5555555 888886 555543333222222223333 5667888889999999998 777666
Q ss_pred eecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEEeCCCcEEEEECCCC
Q 017314 168 LTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGHIDGNLRLWDIQTG 246 (373)
Q Consensus 168 ~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~ 246 (373)
+..+...+.++...+ ...++.++.++.|..+|.. +.....+.... .+.++.+.++|...+ ++ +.|..+| .++
T Consensus 132 ~~~~~~~~~~~~~~~--~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g 204 (330)
T 3hxj_A 132 FKTKKAIYATPIVSE--DGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDG 204 (330)
T ss_dssp EECSSCCCSCCEECT--TSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTS
T ss_pred EcCCCceeeeeEEcC--CCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCC
Confidence 665555455444432 3447778888999999998 76655554433 355666777777544 44 7899999 777
Q ss_pred eeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCc
Q 017314 247 KLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGS 326 (373)
Q Consensus 247 ~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~ 326 (373)
+......... ..+.++..+++|.+.++ +.++.+..+|. +.+....+....... ....+.+++ .|..|+.+|.
T Consensus 205 ~~~~~~~~~~-~~~~~~~~~~~g~l~v~-t~~~gl~~~~~-~g~~~~~~~~~~~~~----~~~~~~~~g-~l~v~t~~gg 276 (330)
T 3hxj_A 205 TEKWNFYAGY-WTVTRPAISEDGTIYVT-SLDGHLYAINP-DGTEKWRFKTGKRIE----SSPVIGNTD-TIYFGSYDGH 276 (330)
T ss_dssp CEEEEECCSS-CCCSCCEECTTSCEEEE-ETTTEEEEECT-TSCEEEEEECSSCCC----SCCEECTTS-CEEEECTTCE
T ss_pred cEEEEEccCC-cceeceEECCCCeEEEE-cCCCeEEEECC-CCCEeEEeeCCCCcc----ccceEcCCC-eEEEecCCCC
Confidence 7666655433 46778888888876554 45666767774 333333333222111 113344455 5667888888
Q ss_pred EEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEc
Q 017314 327 VYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 327 i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW 372 (373)
|..+|. +++.+..+......+.++...++|+ |..++.+|.+++.
T Consensus 277 l~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~ 320 (330)
T 3hxj_A 277 LYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYAL 320 (330)
T ss_dssp EEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEE
T ss_pred EEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEE
Confidence 999996 6777666655555677788877776 5558889988763
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.27 E-value=7.9e-10 Score=103.48 Aligned_cols=236 Identities=12% Similarity=0.079 Sum_probs=162.0
Q ss_pred CCCCEEEEeeC-CCcEEEEeCCCCceeeecccc-ccceEEEEE-c-CCCCEEEEEe------------------CCCcEE
Q 017314 98 YNSARLISGGQ-DKSIKLWDTNTGSLSSTLYGC-LGSVLDLAI-T-HDNRSVIAAS------------------SSNNLY 155 (373)
Q Consensus 98 ~~~~~l~s~s~-D~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~-~-~~~~~l~s~s------------------~d~~i~ 155 (373)
+||++|+.... +..|.+.|+.+.++...+.-- ......+++ + |+++++++++ .++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 47887766665 567999999999877633211 234678887 5 9999998884 346899
Q ss_pred EEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCC--------------------------------------cE
Q 017314 156 VWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDR--------------------------------------TL 197 (373)
Q Consensus 156 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~--------------------------------------~i 197 (373)
+.|..+.+...++.--. .-..+++++ +++++++++.+. .|
T Consensus 179 vID~~t~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEETTTTEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEECCCCeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 99999998877765322 234456676 567777766543 47
Q ss_pred EEEEccC--Cee-eeEEeecCceeEEEEccCCCEEEEEe-CCCcEEEEECCCCe------------eeEEEecccccceE
Q 017314 198 KVWDLHK--GYC-VNTIIFHSNCNALAFSMDGQTIFSGH-IDGNLRLWDIQTGK------------LLSEVAAHSLAAVT 261 (373)
Q Consensus 198 ~vwd~~~--~~~-~~~~~~~~~~~~~~~~~~g~~l~sg~-~dg~i~iwd~~~~~------------~~~~~~~~~~~~v~ 261 (373)
.+.|..+ +.. +..+.......++.++|||+++++++ .+.+|.++|+.+.+ ...++... ....
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG--~gP~ 334 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELG--LGPL 334 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC--SCEE
T ss_pred EEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCC--CCcc
Confidence 7888877 544 56676666778899999999887654 68899999998653 23333222 4678
Q ss_pred EEEEcCCCCEEEEeeCCCeEEEEEccc----------cceeeeeeecCCeee-cCeeeeEECCCCcEEEEEe---CCCc-
Q 017314 262 SISLSRSGNIILTSGRDNLHNLFDIRS----------LEVCGSLRATGNRVA-SNWSRSCISPDESYVAAGS---ADGS- 326 (373)
Q Consensus 262 ~~~~~~~~~~l~s~~~d~~i~~~d~~~----------~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~l~sgs---~Dg~- 326 (373)
.++|+|+|...++.--|+.+..||+.. .+.+.++..+..+.. ..-....++|||+||++.. .|+.
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~ 414 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFL 414 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSC
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccc
Confidence 899999995556677899999999876 445556555433211 1001123589999998864 3543
Q ss_pred ---------EEEEEccCceE
Q 017314 327 ---------VYIWSISKADI 337 (373)
Q Consensus 327 ---------i~iwd~~~~~~ 337 (373)
-.++|+..+++
T Consensus 415 ~~gp~~~~~~ql~dis~~~m 434 (595)
T 1fwx_A 415 NVGPLKPENDQLIDISGDKM 434 (595)
T ss_dssp CCCSSCCEEEEEEECSSSSC
T ss_pred cCCCCCCCcceEEEcCCCcE
Confidence 18899966553
No 238
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.26 E-value=2.3e-10 Score=101.50 Aligned_cols=255 Identities=15% Similarity=0.120 Sum_probs=157.5
Q ss_pred EEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCc
Q 017314 95 LFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDK 174 (373)
Q Consensus 95 ~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~ 174 (373)
.+..++ .|..++.++.|..|| .+++...........+.++.+.+++. ++.++.+ +..+|. +++....+......
T Consensus 26 ~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~--l~~~d~-~g~~~~~~~~~~~~ 99 (330)
T 3hxj_A 26 ILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGT-IYFGSDK--VYAINP-DGTEKWRFDTKKAI 99 (330)
T ss_dssp EECTTS-CEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTE-ECCSSCE--EEEECC-CGGGGGGSCC----
T ss_pred eEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCc-EEEecCc--EEEECC-CCcEEEEEECCCCc
Confidence 444444 567778899999999 88877655544445566777777665 4444444 888886 55544333322222
Q ss_pred EEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCc-eeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEe
Q 017314 175 VCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSN-CNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVA 253 (373)
Q Consensus 175 v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~ 253 (373)
.....+. ...+..++.++.+..+|.. +........... +.++...++|. ++.|+.++.|..+|.. ++....+.
T Consensus 100 ~~~~~~~---~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~ 173 (330)
T 3hxj_A 100 VSDFTIF---EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFK 173 (330)
T ss_dssp -CCEEEE---TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEE
T ss_pred ccCceEE---CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEe
Confidence 2222222 4567888889999999988 665554443332 45566666776 5667788999999998 77766665
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEcc
Q 017314 254 AHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSIS 333 (373)
Q Consensus 254 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~ 333 (373)
... ..+.++.+++++.++++. +.+..+| .+.+....+...... ....+++++|. |..|+.++.|..++.
T Consensus 174 ~~~-~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~----~~~~~~~~~g~-l~v~t~~~gl~~~~~- 242 (330)
T 3hxj_A 174 TND-AITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWT----VTRPAISEDGT-IYVTSLDGHLYAINP- 242 (330)
T ss_dssp CSS-CCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCC----CSCCEECTTSC-EEEEETTTEEEEECT-
T ss_pred cCC-CceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcc----eeceEECCCCe-EEEEcCCCeEEEECC-
Confidence 443 456777888888876665 6778888 555444333322221 22345667765 445667778888874
Q ss_pred CceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 334 KADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 334 ~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+++.+..+......+.++.+.++| .|..++.+|.|..++
T Consensus 243 ~g~~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 243 DGTEKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAIN 281 (330)
T ss_dssp TSCEEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEEC
T ss_pred CCCEeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEEC
Confidence 555555554444334445566555 556667777676553
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.22 E-value=2.3e-08 Score=90.54 Aligned_cols=223 Identities=11% Similarity=0.111 Sum_probs=143.0
Q ss_pred CCCCEEEE-EeCCCcEEEEEcCCC----eeEEEee------c-CCCcEEEEEEeeCCCCEEEEEeCC------CcEEEEE
Q 017314 140 HDNRSVIA-ASSSNNLYVWDVNSG----RVRHTLT------G-HTDKVCAVDVSKISSRHVVSAAYD------RTLKVWD 201 (373)
Q Consensus 140 ~~~~~l~s-~s~d~~i~iwd~~~~----~~~~~~~------~-h~~~v~~~~~~~~~~~~~~s~s~D------~~i~vwd 201 (373)
++.++|+. +..++.|.|+|+.+. +...+++ . -...-..+.+.| ++ .++++..+ +.|.+.|
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEE
Confidence 77887665 556789999999765 5666663 0 011233445555 34 67776655 7899999
Q ss_pred ccCCeeeeEEeecCc----eeEEEEccCCCEEEEEe-------------------CCCcEEEEECCCCeeeEEEecc-cc
Q 017314 202 LHKGYCVNTIIFHSN----CNALAFSMDGQTIFSGH-------------------IDGNLRLWDIQTGKLLSEVAAH-SL 257 (373)
Q Consensus 202 ~~~~~~~~~~~~~~~----~~~~~~~~~g~~l~sg~-------------------~dg~i~iwd~~~~~~~~~~~~~-~~ 257 (373)
..+.+.+.++..... ...+-|+|+++.+++.. .+.+|.+||+.+++.+.++... ..
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g 250 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN 250 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC
Confidence 999988877753321 23477899999988874 3689999999999888888764 22
Q ss_pred cceEEEEE--cCCCCEEEEeeC------CCeEEEEEccccc--eeeeeeecCC--------------eeecCeeeeEECC
Q 017314 258 AAVTSISL--SRSGNIILTSGR------DNLHNLFDIRSLE--VCGSLRATGN--------------RVASNWSRSCISP 313 (373)
Q Consensus 258 ~~v~~~~~--~~~~~~l~s~~~------d~~i~~~d~~~~~--~~~~~~~~~~--------------~~~~~~~~~~~s~ 313 (373)
.....+.| +|+++++..++. ++.+.+|....+. ....+..... ........+.+||
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 23445555 999998777664 4566655443211 1111100000 0011223467899
Q ss_pred CCcEEEEEe-CCCcEEEEEccC---ceEEEEeccC-----------C---ccEEEEEEcCCCCcEEEEe
Q 017314 314 DESYVAAGS-ADGSVYIWSISK---ADIVRTLKEH-----------T---APVLSCSWSGLGKPLASAD 364 (373)
Q Consensus 314 ~~~~l~sgs-~Dg~i~iwd~~~---~~~~~~l~~h-----------~---~~V~~~~~s~~g~~l~s~s 364 (373)
||++|.++. ..+.|.++|+.. .+.+..+.-. . +.-..+++||||++|+.+.
T Consensus 331 DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 331 DDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999987665 468999999863 3445444321 0 0236799999999888776
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.21 E-value=4.7e-09 Score=89.35 Aligned_cols=199 Identities=8% Similarity=0.035 Sum_probs=140.7
Q ss_pred eEEEEEcCCCCEEEEEeC--CCcEEEEEcCCCeeEEEeecCC-CcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeee
Q 017314 133 VLDLAITHDNRSVIAASS--SNNLYVWDVNSGRVRHTLTGHT-DKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVN 209 (373)
Q Consensus 133 v~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~h~-~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~ 209 (373)
...++|++|+...++.+. ++.|+++|+.+++.+..+.-.. .....+++. .....++.-.++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 478999998644444443 5799999999999888765322 222344443 34444555678999999999999888
Q ss_pred EEeecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccc----cceEEEEEcCCCCEEEEeeCCCeEEEEE
Q 017314 210 TIIFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSL----AAVTSISLSRSGNIILTSGRDNLHNLFD 285 (373)
Q Consensus 210 ~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~s~~~d~~i~~~d 285 (373)
++... ......+++||..++.+..++.|.++|..+.+.+..+..... ...+.+.|. ++...+....++.|.+.|
T Consensus 101 ~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID 178 (266)
T 2iwa_A 101 NFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARIS 178 (266)
T ss_dssp EEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEE
T ss_pred EEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEE
Confidence 88665 222345667888888777789999999999988887764321 136677787 676666666788999999
Q ss_pred ccccceeeeeeecCC---------eeecCeeeeEECCCCc-EEEEEeCCCcEEEEEccCc
Q 017314 286 IRSLEVCGSLRATGN---------RVASNWSRSCISPDES-YVAAGSADGSVYIWSISKA 335 (373)
Q Consensus 286 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~s~~~~-~l~sgs~Dg~i~iwd~~~~ 335 (373)
..++++...+...+. ......+.++++|+++ ++++|...+.+++.++...
T Consensus 179 ~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 179 AKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999998888764311 0001224578899875 5667778888998887654
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.17 E-value=1.5e-08 Score=86.21 Aligned_cols=193 Identities=11% Similarity=0.052 Sum_probs=133.9
Q ss_pred EEEEEEcCCCCEEEEeeC--CCcEEEEeCCCCceeeecccccc-ceEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCeeEE
Q 017314 91 CASILFEYNSARLISGGQ--DKSIKLWDTNTGSLSSTLYGCLG-SVLDLAITHDNRSVIAAS-SSNNLYVWDVNSGRVRH 166 (373)
Q Consensus 91 v~~~~~~~~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~ 166 (373)
...+.|++|+..+++.+. +++|++.|+.+++....+.-... -...+++ +++.|+.+. .++.+.++|..+.+.+.
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~--~g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTL--LNEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEE--eCCEEEEEEecCCEEEEEECCCCcEEE
Confidence 578999998755555553 68999999999998877542221 1123444 355555444 57899999999999988
Q ss_pred EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC------ceeEEEEccCCCEEEEEeCCCcEEE
Q 017314 167 TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS------NCNALAFSMDGQTIFSGHIDGNLRL 240 (373)
Q Consensus 167 ~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~sg~~dg~i~i 240 (373)
++..-...-.. +++.... ++.+..+++|.++|..+.+....+.... ..+.+.+. +|...+....++.|.+
T Consensus 101 ~i~~g~~~g~g--lt~Dg~~-l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~v 176 (266)
T 2iwa_A 101 NFTHQMKDGWG--LATDGKI-LYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIAR 176 (266)
T ss_dssp EEECCSSSCCE--EEECSSS-EEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEE
T ss_pred EEECCCCCeEE--EEECCCE-EEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEE
Confidence 88633122233 3443444 4444568899999999988777776432 36778887 7754445556789999
Q ss_pred EECCCCeeeEEEeccc------------ccceEEEEEcCCCCE-EEEeeCCCeEEEEEcccc
Q 017314 241 WDIQTGKLLSEVAAHS------------LAAVTSISLSRSGNI-ILTSGRDNLHNLFDIRSL 289 (373)
Q Consensus 241 wd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~-l~s~~~d~~i~~~d~~~~ 289 (373)
.|..+++.+..+.... ....+.|+|+|+++. ++++...+.+...++...
T Consensus 177 ID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 177 ISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9999999998886531 125689999999875 555667788888877653
No 242
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.14 E-value=6.4e-08 Score=85.64 Aligned_cols=239 Identities=13% Similarity=0.083 Sum_probs=142.6
Q ss_pred EEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecc-------------------ccccceEEEEEcCCCCEEEEEeCC
Q 017314 91 CASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLY-------------------GCLGSVLDLAITHDNRSVIAASSS 151 (373)
Q Consensus 91 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~l~s~s~d 151 (373)
-.+++++++++.++++..++.|..||..++....... .....+..+++.+++..|+.+...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 4467889998878888899999999987654321110 011347889999844456666555
Q ss_pred CcEEEEEcCCCeeEEEeecC-----CCcEEEEEEeeCCCCEEEEEeC-----------------CCcEEEEEccCCeeee
Q 017314 152 NNLYVWDVNSGRVRHTLTGH-----TDKVCAVDVSKISSRHVVSAAY-----------------DRTLKVWDLHKGYCVN 209 (373)
Q Consensus 152 ~~i~iwd~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~~~~s~s~-----------------D~~i~vwd~~~~~~~~ 209 (373)
+.+..+|..+++.. .+... ......+.+.+.+++..++-.. ++.|..+|..++....
T Consensus 101 ~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~ 179 (322)
T 2fp8_A 101 YHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL 179 (322)
T ss_dssp TEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE
T ss_pred CCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE
Confidence 66888888766432 22111 1235667776523455554322 3678888887665433
Q ss_pred EEeecCceeEEEEccCCCEEEEE-eCCCcEEEEECCCCe--eeEEEecccccceEEEEEcCCCCEEEEeeC---------
Q 017314 210 TIIFHSNCNALAFSMDGQTIFSG-HIDGNLRLWDIQTGK--LLSEVAAHSLAAVTSISLSRSGNIILTSGR--------- 277 (373)
Q Consensus 210 ~~~~~~~~~~~~~~~~g~~l~sg-~~dg~i~iwd~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~--------- 277 (373)
....-...+.++++|+|+.|+.+ +.++.|..||+.... ....+... .. ...++++++|++.++...
T Consensus 180 ~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~-~g-P~gi~~d~~G~l~va~~~~~~~~~~~~ 257 (322)
T 2fp8_A 180 LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKI-PN-PGNIKRNADGHFWVSSSEELDGNMHGR 257 (322)
T ss_dssp EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEEC-SS-EEEEEECTTSCEEEEEEEETTSSTTSC
T ss_pred eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeC-CC-CCCeEECCCCCEEEEecCcccccccCC
Confidence 22222446789999999976655 556889999987521 11122111 13 678999999998777654
Q ss_pred -CCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccC
Q 017314 278 -DNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISK 334 (373)
Q Consensus 278 -d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~ 334 (373)
.+.+..+|.. ++....+.............+++ .++.++++....+.|.++++..
T Consensus 258 ~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 258 VDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 4567777763 44444443322110111112233 4566666666777888888754
No 243
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.12 E-value=2.7e-08 Score=83.74 Aligned_cols=194 Identities=12% Similarity=0.113 Sum_probs=132.9
Q ss_pred eEEEeecCCCc--EEEEEEeeCCCCEEEEEeCCC--cEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEe-CCCcE
Q 017314 164 VRHTLTGHTDK--VCAVDVSKISSRHVVSAAYDR--TLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGH-IDGNL 238 (373)
Q Consensus 164 ~~~~~~~h~~~--v~~~~~~~~~~~~~~s~s~D~--~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~-~dg~i 238 (373)
.+.++. |... ...+.++ ++.+..+++.+| +|+++|+.+++.+..+..........+.+++..|+... .++.+
T Consensus 33 vv~~~p-hd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 33 IVHSYP-HDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEE-CCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEec-CCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEE
Confidence 445553 4332 4677776 356667777766 99999999999988887766554444455566776554 58899
Q ss_pred EEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeee-cCeeeeEECCCCcE
Q 017314 239 RLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVA-SNWSRSCISPDESY 317 (373)
Q Consensus 239 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~ 317 (373)
.+||..+.+.+.++.....+ ..++++++.|+.+..++.+.++|..+.+...++........ ...+.+.+. +|+.
T Consensus 110 ~v~D~~t~~~~~ti~~~~eG----~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~l 184 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGEG----WGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEI 184 (262)
T ss_dssp EEEETTTCCEEEEEECSSCC----CCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred EEEECccCcEEEEEECCCCc----eEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEE
Confidence 99999999999988764311 23335667666666678899999999888887765321111 111122333 6766
Q ss_pred EEEEeCCCcEEEEEccCceEEEEeccC------------CccEEEEEEcCCCCcEEEEeC
Q 017314 318 VAAGSADGSVYIWSISKADIVRTLKEH------------TAPVLSCSWSGLGKPLASADK 365 (373)
Q Consensus 318 l~sgs~Dg~i~iwd~~~~~~~~~l~~h------------~~~V~~~~~s~~g~~l~s~s~ 365 (373)
.+..-.+..|.+.|..+++.+..+.-. ....+.+||+|+++.|..++.
T Consensus 185 yan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 185 FANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 666656889999999999998877532 124589999999887766654
No 244
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.12 E-value=1e-08 Score=99.89 Aligned_cols=268 Identities=13% Similarity=0.156 Sum_probs=174.2
Q ss_pred CCEEEEeeCCCcEEEEeCCCCceeeecccccc----------ce-EEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q 017314 100 SARLISGGQDKSIKLWDTNTGSLSSTLYGCLG----------SV-LDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 100 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~----------~v-~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 168 (373)
+..|+.++.++.|.-+|..+|+.+-.+..... .+ ..+++ ++..++.++.|+.+..+|..+|+.+..+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 56788888899999999999987644332111 00 11222 3567888999999999999999988776
Q ss_pred ecCC----CcEEE-EEEeeCCCCEEEEEeC------CCcEEEEEccCCeeeeEEeec--C--------------------
Q 017314 169 TGHT----DKVCA-VDVSKISSRHVVSAAY------DRTLKVWDLHKGYCVNTIIFH--S-------------------- 215 (373)
Q Consensus 169 ~~h~----~~v~~-~~~~~~~~~~~~s~s~------D~~i~vwd~~~~~~~~~~~~~--~-------------------- 215 (373)
.... ..+.+ ..+ ....++.+.. ++.|..+|..+|+.+-.+... .
T Consensus 144 ~~~~~~~~~~~~~~P~v---~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~ 220 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRV---VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGD 220 (668)
T ss_dssp ECSCTTSSCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSS
T ss_pred ccCCCCCcceecCCCEE---ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcc
Confidence 5421 11110 001 1234554433 589999999999887666421 0
Q ss_pred ----------ceeEEEEccCCCEEEEEeCCCc-------------------EEEEECCCCeeeEEEeccc-c-------c
Q 017314 216 ----------NCNALAFSMDGQTIFSGHIDGN-------------------LRLWDIQTGKLLSEVAAHS-L-------A 258 (373)
Q Consensus 216 ----------~~~~~~~~~~g~~l~sg~~dg~-------------------i~iwd~~~~~~~~~~~~~~-~-------~ 258 (373)
....+++.|++..++.++.++. |..+|..+|+.+..+.... . .
T Consensus 221 ~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~ 300 (668)
T 1kv9_A 221 QYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQ 300 (668)
T ss_dssp CHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCS
T ss_pred ceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCC
Confidence 0124688888888988887763 9999999999988775421 0 1
Q ss_pred ceEEEEEcCCCC---EEEEeeCCCeEEEEEccccceeeeeeecC------------Ce--------------------ee
Q 017314 259 AVTSISLSRSGN---IILTSGRDNLHNLFDIRSLEVCGSLRATG------------NR--------------------VA 303 (373)
Q Consensus 259 ~v~~~~~~~~~~---~l~s~~~d~~i~~~d~~~~~~~~~~~~~~------------~~--------------------~~ 303 (373)
+.....+..+|+ .++.++.++.+.++|..+++.+....... .. -.
T Consensus 301 ~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~ 380 (668)
T 1kv9_A 301 QITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGA 380 (668)
T ss_dssp CEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCS
T ss_pred CcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccc
Confidence 222223333565 68889999999999999888763322111 00 01
Q ss_pred cCeeeeEECCCCcEEEEE------------------------------------eCCCcEEEEEccCceEEEEeccCCcc
Q 017314 304 SNWSRSCISPDESYVAAG------------------------------------SADGSVYIWSISKADIVRTLKEHTAP 347 (373)
Q Consensus 304 ~~~~~~~~s~~~~~l~sg------------------------------------s~Dg~i~iwd~~~~~~~~~l~~h~~~ 347 (373)
..|...+++|+..++... ..+|.|+.||+.+++.+-....+ .+
T Consensus 381 ~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~ 459 (668)
T 1kv9_A 381 HNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP-TH 459 (668)
T ss_dssp SCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES-SS
T ss_pred cCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC-CC
Confidence 134456778876665431 13488999999999987665433 23
Q ss_pred EEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 348 VLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 348 V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+....+...|..++.++.||.|+.|+
T Consensus 460 ~~~~~~~t~gg~vf~g~~dg~l~a~d 485 (668)
T 1kv9_A 460 WNGGTLSTAGNLVFQGTAAGQMHAYS 485 (668)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEE
T ss_pred CcCceeEeCCCEEEEECCcccchhhh
Confidence 33344455678888899999999874
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.12 E-value=1.6e-08 Score=98.49 Aligned_cols=257 Identities=13% Similarity=0.135 Sum_probs=160.6
Q ss_pred CCEEEEeeCCCcEEEEeCCCCceeeeccccc----cceEE-EEEcCCCCEEEEEeC------CCcEEEEEcCCCeeEEEe
Q 017314 100 SARLISGGQDKSIKLWDTNTGSLSSTLYGCL----GSVLD-LAITHDNRSVIAASS------SNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 100 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~l~s~s~------d~~i~iwd~~~~~~~~~~ 168 (373)
+..++.++.|+.|..+|..+|+.+-.+.... ..+.+ ..+ .+..++.+.. ++.|..+|..+|+.+..+
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 194 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV--VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRF 194 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE--ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEe
Confidence 5678888999999999999998765443210 11110 011 1334555443 589999999999988776
Q ss_pred ecC---CC----------------------------cEEEEEEeeCCCCEEEEEeCCC-------------------cEE
Q 017314 169 TGH---TD----------------------------KVCAVDVSKISSRHVVSAAYDR-------------------TLK 198 (373)
Q Consensus 169 ~~h---~~----------------------------~v~~~~~~~~~~~~~~s~s~D~-------------------~i~ 198 (373)
... .. ....+++.+ ....++.++.++ +|.
T Consensus 195 ~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~ 273 (668)
T 1kv9_A 195 YTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSIL 273 (668)
T ss_dssp ESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEE
T ss_pred cccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 521 00 001234544 356777777665 489
Q ss_pred EEEccCCeeeeEEeec----------CceeEEEEccCCC---EEEEEeCCCcEEEEECCCCeeeEEEecccc--------
Q 017314 199 VWDLHKGYCVNTIIFH----------SNCNALAFSMDGQ---TIFSGHIDGNLRLWDIQTGKLLSEVAAHSL-------- 257 (373)
Q Consensus 199 vwd~~~~~~~~~~~~~----------~~~~~~~~~~~g~---~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-------- 257 (373)
-+|..+|+.+-.+... .......+..+|+ .++.++.+|.+.++|..+|+.+........
T Consensus 274 AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~ 353 (668)
T 1kv9_A 274 AIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDL 353 (668)
T ss_dssp EECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECT
T ss_pred EEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccccccccccccccc
Confidence 9999999887666542 1122223334675 688999999999999999998744332110
Q ss_pred ---cce------------------------EEEEEcCCCCEEEEe-----------------------------------
Q 017314 258 ---AAV------------------------TSISLSRSGNIILTS----------------------------------- 275 (373)
Q Consensus 258 ---~~v------------------------~~~~~~~~~~~l~s~----------------------------------- 275 (373)
..+ ..++++|+..++...
T Consensus 354 ~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~ 433 (668)
T 1kv9_A 354 ATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPA 433 (668)
T ss_dssp TTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCG
T ss_pred ccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCC
Confidence 000 125777776665541
Q ss_pred -eCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccE-EEEEE
Q 017314 276 -GRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPV-LSCSW 353 (373)
Q Consensus 276 -~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V-~~~~~ 353 (373)
..++.+..||+.+++..-+........ ...+...+.+++.|+.||.|+.||..+++.+..++...+.. .-+.+
T Consensus 434 ~~~~g~l~A~D~~tG~~~W~~~~~~~~~-----~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~ 508 (668)
T 1kv9_A 434 AVVSGALLAWDPVKQKAAWKVPYPTHWN-----GGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTF 508 (668)
T ss_dssp GGCEEEEEEEETTTTEEEEEEEESSSCC-----CCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEE
T ss_pred CCccceEEEEeCCCCcEEEEccCCCCCc-----CceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEE
Confidence 123678889998887665544322211 11234467788889999999999999999988776433211 12344
Q ss_pred cCCCC-cEEEEe
Q 017314 354 SGLGK-PLASAD 364 (373)
Q Consensus 354 s~~g~-~l~s~s 364 (373)
..+|+ |++.++
T Consensus 509 ~~~G~~yva~~~ 520 (668)
T 1kv9_A 509 ELAGRQYVAIMA 520 (668)
T ss_dssp EETTEEEEEEEE
T ss_pred EECCEEEEEEEe
Confidence 45666 555554
No 246
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.12 E-value=1.9e-08 Score=84.71 Aligned_cols=186 Identities=15% Similarity=0.206 Sum_probs=130.4
Q ss_pred CccCc--EEEEEEcCCCCEEEEeeCCC--cEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcC
Q 017314 86 AHEGG--CASILFEYNSARLISGGQDK--SIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVN 160 (373)
Q Consensus 86 ~h~~~--v~~~~~~~~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~ 160 (373)
+|... ...+.|+ ++.++.++|.+| .|+++|+++++....+.-.. ......+.++++.|+.+. .++.+.+||..
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 45543 4688888 777788888876 99999999999887765332 232323334556666555 57899999999
Q ss_pred CCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec------CceeEEEEccCCCEEEEEeC
Q 017314 161 SGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH------SNCNALAFSMDGQTIFSGHI 234 (373)
Q Consensus 161 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~------~~~~~~~~~~~g~~l~sg~~ 234 (373)
+.+.+.++..-... ..++ +.. ..++.+..+++|.++|..+.+.+.++... ...+.+.+. +|...+....
T Consensus 116 t~~~~~ti~~~~eG-~glt--~dg-~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 116 NLRQVRSFNYDGEG-WGLT--HND-QYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp TCCEEEEEECSSCC-CCEE--ECS-SCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred cCcEEEEEECCCCc-eEEe--cCC-CEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc
Confidence 99999888753322 2333 333 44544445788999999998888777653 224567776 7765555556
Q ss_pred CCcEEEEECCCCeeeEEEeccc-----------ccceEEEEEcCCCCEEEEeeCC
Q 017314 235 DGNLRLWDIQTGKLLSEVAAHS-----------LAAVTSISLSRSGNIILTSGRD 278 (373)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~s~~~d 278 (373)
+..|.+.|..+++++..+.... ....+.|+|+|+++.|+..|..
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 8899999999999998886531 1356899999998877776653
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.09 E-value=2.4e-08 Score=83.97 Aligned_cols=184 Identities=13% Similarity=0.155 Sum_probs=128.3
Q ss_pred CccCc--EEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEE-EEeCCCcEEEEEcCCC
Q 017314 86 AHEGG--CASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVI-AASSSNNLYVWDVNSG 162 (373)
Q Consensus 86 ~h~~~--v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~s~d~~i~iwd~~~~ 162 (373)
.|... ...+.|+ ++.++++.+.++.|+++|+++++....+ - ........+.++++.|+ +.-.++.+.+||..+.
T Consensus 50 phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 50 PHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp ECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEECSSCEEEEESSSCEEEEEETTTT
T ss_pred cCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEeCCEEEEEEccCCEEEEEECCcC
Confidence 45433 4678887 4677888889999999999999987776 2 22332222233444444 4456789999999999
Q ss_pred eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC------ceeEEEEccCCCEEEEEeCCC
Q 017314 163 RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS------NCNALAFSMDGQTIFSGHIDG 236 (373)
Q Consensus 163 ~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~sg~~dg 236 (373)
+.+.++..-.. -..++ + ++..++.+..+++|.++|..+.+.+.++.... ..+.+.+. +|...+....+.
T Consensus 127 ~~~~ti~~~~e-GwGLt--~-Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~ 201 (268)
T 3nok_A 127 QRERTTRYSGE-GWGLC--Y-WNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSS 201 (268)
T ss_dssp EEEEEEECSSC-CCCEE--E-ETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCS
T ss_pred cEEEEEeCCCc-eeEEe--c-CCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCC
Confidence 99998875322 23444 3 24556655668999999999988887776532 34667776 776555555688
Q ss_pred cEEEEECCCCeeeEEEeccc------------ccceEEEEEcCCCCEEEEeeC
Q 017314 237 NLRLWDIQTGKLLSEVAAHS------------LAAVTSISLSRSGNIILTSGR 277 (373)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~s~~~ 277 (373)
.|.+.|..+++++..+.... ....+.|+++|+++.|+..|.
T Consensus 202 ~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 202 DVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred eEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 99999999999988886531 135789999998765555443
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=99.06 E-value=7.6e-08 Score=91.96 Aligned_cols=268 Identities=11% Similarity=0.084 Sum_probs=167.4
Q ss_pred CCEEEEeeC-CCcEEEEeC-CCCceeeecccccc----------c-eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEE
Q 017314 100 SARLISGGQ-DKSIKLWDT-NTGSLSSTLYGCLG----------S-VLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRH 166 (373)
Q Consensus 100 ~~~l~s~s~-D~~v~iwd~-~~~~~~~~~~~~~~----------~-v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~ 166 (373)
+..++.++. ++.|.-+|. .+|+.+=.+..... . -..+++ ++..++.++.|+.+..+|..+|+.+.
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W 139 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINW 139 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 556777777 899999999 89887543321110 0 011222 35678888999999999999999877
Q ss_pred EeecCC--C--cEEE-EEEeeCCCCEEEEEeC------CCcEEEEEccCCeeeeEEeecCce------------------
Q 017314 167 TLTGHT--D--KVCA-VDVSKISSRHVVSAAY------DRTLKVWDLHKGYCVNTIIFHSNC------------------ 217 (373)
Q Consensus 167 ~~~~h~--~--~v~~-~~~~~~~~~~~~s~s~------D~~i~vwd~~~~~~~~~~~~~~~~------------------ 217 (373)
.+.... . .+.+ -.+ ....++.++. ++.|..+|..+|+.+-.+......
T Consensus 140 ~~~~~~~~~~~~~~~~P~v---~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 140 EVEVCDPKVGSTLTQAPFV---AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEECCCGGGTCBCCSCCEE---ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EecCCCCCccceeccCCEE---ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 654221 0 1111 011 1235555554 799999999999887665432211
Q ss_pred ---------------------eEEEEccCCCEEEEEeCC----------------CcEEEEECCCCeeeEEEeccc----
Q 017314 218 ---------------------NALAFSMDGQTIFSGHID----------------GNLRLWDIQTGKLLSEVAAHS---- 256 (373)
Q Consensus 218 ---------------------~~~~~~~~g~~l~sg~~d----------------g~i~iwd~~~~~~~~~~~~~~---- 256 (373)
..+++.++...++.++.+ +.|..+|..+|+.+..+....
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 135667766777766532 359999999999887775321
Q ss_pred ----ccceEEEEEcCCCC---EEEEeeCCCeEEEEEccccceeeeeeecC-------------Cee--------------
Q 017314 257 ----LAAVTSISLSRSGN---IILTSGRDNLHNLFDIRSLEVCGSLRATG-------------NRV-------------- 302 (373)
Q Consensus 257 ----~~~v~~~~~~~~~~---~l~s~~~d~~i~~~d~~~~~~~~~~~~~~-------------~~~-------------- 302 (373)
.....-+...++|+ .++.++.++.+.++|..+++.+-.+.... .++
T Consensus 297 d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~ 376 (571)
T 2ad6_A 297 DFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGT 376 (571)
T ss_dssp CCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEE
T ss_pred ccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCce
Confidence 01111222234674 57778889999999998887765543221 111
Q ss_pred --------ecCeeeeEECCCCcEEEEEe-------------------------------------CCCcEEEEEccCceE
Q 017314 303 --------ASNWSRSCISPDESYVAAGS-------------------------------------ADGSVYIWSISKADI 337 (373)
Q Consensus 303 --------~~~~~~~~~s~~~~~l~sgs-------------------------------------~Dg~i~iwd~~~~~~ 337 (373)
...|...+++|+..+|...+ .+|.|+.||..+++.
T Consensus 377 ~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~ 456 (571)
T 2ad6_A 377 NICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKA 456 (571)
T ss_dssp EESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCE
T ss_pred EECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCE
Confidence 11244567888877776653 357899999999988
Q ss_pred EEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 338 VRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 338 ~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
+-.+... .++.+......+..+..++.||.|+.|+
T Consensus 457 ~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 457 KWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALD 491 (571)
T ss_dssp EEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred EEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEE
Confidence 7665432 2222222333456677788999998764
No 249
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.02 E-value=2.5e-08 Score=97.15 Aligned_cols=271 Identities=10% Similarity=0.070 Sum_probs=150.6
Q ss_pred EEEEcC-CCCEEEEeeCCC-----------cEEEEeCCCCceee--eccc-cccceEEEEEcCCCCEEEEEeC-CCcEEE
Q 017314 93 SILFEY-NSARLISGGQDK-----------SIKLWDTNTGSLSS--TLYG-CLGSVLDLAITHDNRSVIAASS-SNNLYV 156 (373)
Q Consensus 93 ~~~~~~-~~~~l~s~s~D~-----------~v~iwd~~~~~~~~--~~~~-~~~~v~~~~~~~~~~~l~s~s~-d~~i~i 156 (373)
+.++.+ +++.++.||.+. .+.+||..+++... .+.. +.....++++..++..++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 888888888653 58899998875322 1111 2222334677889999998884 458999
Q ss_pred EEcCCCeeEEEeecCCCcE-EEEEEeeCCCCEEEEEe-CC-----CcEEEEEccCCeeeeEE-----eecCceeEEEEcc
Q 017314 157 WDVNSGRVRHTLTGHTDKV-CAVDVSKISSRHVVSAA-YD-----RTLKVWDLHKGYCVNTI-----IFHSNCNALAFSM 224 (373)
Q Consensus 157 wd~~~~~~~~~~~~h~~~v-~~~~~~~~~~~~~~s~s-~D-----~~i~vwd~~~~~~~~~~-----~~~~~~~~~~~~~ 224 (373)
||+.+++-...-.-+.... .++.+.+ +++.++.|+ .+ ..+.+||..++.....- ..........+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCccccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 9998775333211121111 1222322 567778887 44 57899999876543210 0000000011224
Q ss_pred CCCEEEEEeCCC---------cEEEEECCCCeeeEEEecccc--------cceEEEEEc-CCCCEEEEeeCCC-------
Q 017314 225 DGQTIFSGHIDG---------NLRLWDIQTGKLLSEVAAHSL--------AAVTSISLS-RSGNIILTSGRDN------- 279 (373)
Q Consensus 225 ~g~~l~sg~~dg---------~i~iwd~~~~~~~~~~~~~~~--------~~v~~~~~~-~~~~~l~s~~~d~------- 279 (373)
++...+.|+.|| .+..||..+............ ..-.++.|. .++++++.||.+.
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 455555555443 567888887654433222110 123445554 3677888887542
Q ss_pred ----eEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCC-----------CcEEEEEccCceEEEE--ec
Q 017314 280 ----LHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSAD-----------GSVYIWSISKADIVRT--LK 342 (373)
Q Consensus 280 ----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~D-----------g~i~iwd~~~~~~~~~--l~ 342 (373)
.+.+||..+....... .............++.|+|+.++.|+.+ ..+.+||..+.+-... +.
T Consensus 429 ~~~~~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~ 507 (656)
T 1k3i_A 429 TNAHIITLGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS 507 (656)
T ss_dssp CCEEEEECCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS
T ss_pred CcceEEEcCCCCCCCeeEEc-cCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC
Confidence 5667776654332211 0011111112234567899999999864 4689999987654321 11
Q ss_pred cCCccEEEEEEcCCCCcEEEEeC
Q 017314 343 EHTAPVLSCSWSGLGKPLASADK 365 (373)
Q Consensus 343 ~h~~~V~~~~~s~~g~~l~s~s~ 365 (373)
.......++.+.|+|+.++.||.
T Consensus 508 ~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 508 IVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SCCCTTEEEEECTTSCEEEEECC
T ss_pred CccccccHhhcCCCcEEEecCCC
Confidence 11111234556799999999985
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.01 E-value=4e-07 Score=75.92 Aligned_cols=185 Identities=15% Similarity=0.176 Sum_probs=127.4
Q ss_pred CccCc--EEEEEEcCCCCEEEEeeCC--CcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEE-EeCCCcEEEEEcC
Q 017314 86 AHEGG--CASILFEYNSARLISGGQD--KSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIA-ASSSNNLYVWDVN 160 (373)
Q Consensus 86 ~h~~~--v~~~~~~~~~~~l~s~s~D--~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s-~s~d~~i~iwd~~ 160 (373)
+|... ...+.|+. +..+.|.+.+ +.|+.+|+.+++....+.-... .....+.++++.|+. .-.++.+.+||..
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCEEEEEECC
Confidence 46543 55888886 6677777775 4899999999998876643222 222222334455544 4467899999999
Q ss_pred CCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec------CceeEEEEccCCCEEEEEeC
Q 017314 161 SGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH------SNCNALAFSMDGQTIFSGHI 234 (373)
Q Consensus 161 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~------~~~~~~~~~~~g~~l~sg~~ 234 (373)
+.+.+.++..-... ..++ +....+++| ..+++|.++|..+.+.+.++... ...+.+.+. +|...+....
T Consensus 94 tl~~~~ti~~~~~G-wglt--~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 94 TLTPRARFRYPGEG-WALT--SDDSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp TTEEEEEEECSSCC-CEEE--ECSSCEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred cCcEEEEEeCCCCc-eEEe--eCCCEEEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 99999988754332 3443 334444444 55889999999998888777653 235666665 6665555556
Q ss_pred CCcEEEEECCCCeeeEEEecc------------cccceEEEEEcCCCCEEEEeeC
Q 017314 235 DGNLRLWDIQTGKLLSEVAAH------------SLAAVTSISLSRSGNIILTSGR 277 (373)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~s~~~ 277 (373)
+..|.+.|..+++++..+... .....+.|+++|+++.|+..|.
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 789999999999998887643 1236789999998877666654
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.00 E-value=2.6e-07 Score=77.05 Aligned_cols=194 Identities=10% Similarity=0.022 Sum_probs=130.0
Q ss_pred eEEEeecCC--CcEEEEEEeeCCCCEEEEEeCC--CcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEE-EeCCCcE
Q 017314 164 VRHTLTGHT--DKVCAVDVSKISSRHVVSAAYD--RTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFS-GHIDGNL 238 (373)
Q Consensus 164 ~~~~~~~h~--~~v~~~~~~~~~~~~~~s~s~D--~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s-g~~dg~i 238 (373)
.+.++ .|. .....+.|+. +.+..|.+.+ .+|+.+|+.+++.++.+..........+.+++..|+. ...++.+
T Consensus 11 v~~~~-phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v 87 (243)
T 3mbr_X 11 VVKRY-PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEG 87 (243)
T ss_dssp EEEEE-ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEEEc-CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEE
Confidence 44455 343 3356787764 4556677765 4899999999999888877665544444445666654 4568899
Q ss_pred EEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeec-CeeeeEECCCCcE
Q 017314 239 RLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVAS-NWSRSCISPDESY 317 (373)
Q Consensus 239 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~~ 317 (373)
.+||..+.+.+.++..... -..++ +++..|+.+..++.+.++|..+.+...++......... ..+.+.+ .+|+.
T Consensus 88 ~v~D~~tl~~~~ti~~~~~--Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~-~~G~l 162 (243)
T 3mbr_X 88 FVYDLATLTPRARFRYPGE--GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEW-VNGEL 162 (243)
T ss_dssp EEEETTTTEEEEEEECSSC--CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEE-ETTEE
T ss_pred EEEECCcCcEEEEEeCCCC--ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEE-eCCEE
Confidence 9999999999998876532 22333 45665555556888999999998888777643221111 1111222 26766
Q ss_pred EEEEeCCCcEEEEEccCceEEEEeccC------------C-ccEEEEEEcCCCCcEEEEeC
Q 017314 318 VAAGSADGSVYIWSISKADIVRTLKEH------------T-APVLSCSWSGLGKPLASADK 365 (373)
Q Consensus 318 l~sgs~Dg~i~iwd~~~~~~~~~l~~h------------~-~~V~~~~~s~~g~~l~s~s~ 365 (373)
.+..-.+..|.+.|..+++.+..+.-. . ...+.+||+|+++.|..++.
T Consensus 163 yanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 163 LANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 655556779999999999998876521 1 24589999998876655553
No 252
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.00 E-value=9.4e-08 Score=80.44 Aligned_cols=181 Identities=10% Similarity=0.049 Sum_probs=127.8
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEE--EEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE
Q 017314 134 LDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVC--AVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI 211 (373)
Q Consensus 134 ~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~--~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~ 211 (373)
..+.|+ ++.+.++.+.++.|+++|+.+++.+..+ -. .... .+++ ......+..-.++.+.++|..+.+.+.++
T Consensus 58 qGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~-~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti 132 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RL-GNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTT 132 (268)
T ss_dssp EEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-EC-TTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred ceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CC-CCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEE
Confidence 567776 4566677778889999999999887776 22 2222 3443 34555666667899999999999999988
Q ss_pred eecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEeccc----ccceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q 017314 212 IFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHS----LAAVTSISLSRSGNIILTSGRDNLHNLFDIR 287 (373)
Q Consensus 212 ~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~ 287 (373)
........+ ++|+..|+.+..++.|.++|..+.+.+..+.... ...++.+.+. +|.+.+..-.++.|.+.|..
T Consensus 133 ~~~~eGwGL--t~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~ 209 (268)
T 3nok_A 133 RYSGEGWGL--CYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPA 209 (268)
T ss_dssp ECSSCCCCE--EEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTT
T ss_pred eCCCceeEE--ecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCC
Confidence 765543344 4678888887778999999999999888776532 1235667776 67666666678899999999
Q ss_pred ccceeeeeeecC---------CeeecCeeeeEECCCC-cEEEEEe
Q 017314 288 SLEVCGSLRATG---------NRVASNWSRSCISPDE-SYVAAGS 322 (373)
Q Consensus 288 ~~~~~~~~~~~~---------~~~~~~~~~~~~s~~~-~~l~sgs 322 (373)
++++...+...+ .......+.++++|++ +++++|-
T Consensus 210 TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 210 TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 999888776431 1111234567888865 4555553
No 253
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.97 E-value=4.7e-07 Score=86.48 Aligned_cols=254 Identities=11% Similarity=0.071 Sum_probs=155.6
Q ss_pred CCEEEEeeCCCcEEEEeCCCCceeeeccccc--c--ceEE-EEEcCCCCEEEEEeC------CCcEEEEEcCCCeeEEEe
Q 017314 100 SARLISGGQDKSIKLWDTNTGSLSSTLYGCL--G--SVLD-LAITHDNRSVIAASS------SNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 100 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~--~--~v~~-~~~~~~~~~l~s~s~------d~~i~iwd~~~~~~~~~~ 168 (373)
+..++.++.|+.|..+|..+|+.+-...... . .+.+ ..+ .+..++.++. ++.|..+|..+|+.+..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--AKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--ECCEEEEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 5678888899999999999998764432111 0 1111 111 1345666654 789999999999988766
Q ss_pred ecCCCc-------------------------------------E-EEEEEeeCCCCEEEEEeCC----------------
Q 017314 169 TGHTDK-------------------------------------V-CAVDVSKISSRHVVSAAYD---------------- 194 (373)
Q Consensus 169 ~~h~~~-------------------------------------v-~~~~~~~~~~~~~~s~s~D---------------- 194 (373)
...... + ..+++.+ ....++.+..+
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~-~~g~vy~~~g~~~~~~~~~~~gd~~y~ 271 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDP-KLNLFYYGSGNPAPWNETMRPGDNKWT 271 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcC-CCCeEEEECCCCccccCCccCCCceeE
Confidence 532110 0 1123333 23455544422
Q ss_pred CcEEEEEccCCeeeeEEeecC----------ceeEEEEccCCC---EEEEEeCCCcEEEEECCCCeeeEEEeccc-c---
Q 017314 195 RTLKVWDLHKGYCVNTIIFHS----------NCNALAFSMDGQ---TIFSGHIDGNLRLWDIQTGKLLSEVAAHS-L--- 257 (373)
Q Consensus 195 ~~i~vwd~~~~~~~~~~~~~~----------~~~~~~~~~~g~---~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-~--- 257 (373)
++|..+|..+|+.+-.+.... ....+...++|+ .++.++.+|.+.++|..+|+.+....... .
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 368999999998876664321 111222335774 57788999999999999999887654321 0
Q ss_pred --------cce--------------------------EEEEEcCCCCEEEEee---------------------------
Q 017314 258 --------AAV--------------------------TSISLSRSGNIILTSG--------------------------- 276 (373)
Q Consensus 258 --------~~v--------------------------~~~~~~~~~~~l~s~~--------------------------- 276 (373)
.++ ..++++|+..+++...
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 011 2357888877776653
Q ss_pred ----------CCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCc
Q 017314 277 ----------RDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTA 346 (373)
Q Consensus 277 ----------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~ 346 (373)
.++.+..||+.+++..-++........ ..+...+..++.++.||.|+.||..+++.+..++-...
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~~~~~-----~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~ 506 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKFAAWG-----GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSG 506 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTTCCEEEEEEESSCCCS-----BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred ccCccccCCCCCCeEEEEECCCCCEEEEecCCCCccc-----eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCC
Confidence 246788888888776555443221111 11222456677799999999999999999887763221
Q ss_pred c-EEEEEEcCCCCcEE
Q 017314 347 P-VLSCSWSGLGKPLA 361 (373)
Q Consensus 347 ~-V~~~~~s~~g~~l~ 361 (373)
. -.-+.+..+|+.++
T Consensus 507 ~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 507 GIGSPMTYSFKGKQYI 522 (571)
T ss_dssp CCSCCEEEEETTEEEE
T ss_pred cEeeeEEEEECCEEEE
Confidence 1 11234667777443
No 254
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.96 E-value=5.6e-07 Score=86.05 Aligned_cols=270 Identities=11% Similarity=0.081 Sum_probs=166.6
Q ss_pred CCEEEEeeC-CCcEEEEeC-CCCceeeecccccc-----------ceEEEEEcCCCCE----EEEEeCCCcEEEEEcCCC
Q 017314 100 SARLISGGQ-DKSIKLWDT-NTGSLSSTLYGCLG-----------SVLDLAITHDNRS----VIAASSSNNLYVWDVNSG 162 (373)
Q Consensus 100 ~~~l~s~s~-D~~v~iwd~-~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~----l~s~s~d~~i~iwd~~~~ 162 (373)
+..|+.++. ++.|.-+|. .+|+.+=.+..... ....++++|.+.. ++.++.|+.+.-+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 556777777 899999999 89887533321110 0122455444444 888899999999999999
Q ss_pred eeEEEeecCCC----cEEE-EEEeeCCCCEEEEEe------CCCcEEEEEccCCeeeeEEeecCce--------------
Q 017314 163 RVRHTLTGHTD----KVCA-VDVSKISSRHVVSAA------YDRTLKVWDLHKGYCVNTIIFHSNC-------------- 217 (373)
Q Consensus 163 ~~~~~~~~h~~----~v~~-~~~~~~~~~~~~s~s------~D~~i~vwd~~~~~~~~~~~~~~~~-------------- 217 (373)
+.+........ .+.+ -.+. + ..++.++ .++.|+-+|..+|+.+-.+......
T Consensus 142 ~~~W~~~~~~~~~~~~~~ssP~v~--~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~ 218 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTLTIAPYVV--K-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNP 218 (599)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE--T-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CEEEeecCCCCCccceeecCCEEE--C-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccc
Confidence 98776543210 1111 0111 2 3455554 4899999999999887665432211
Q ss_pred -------------------------eEEEEccCCCEEEEEeCC----------------CcEEEEECCCCeeeEEEeccc
Q 017314 218 -------------------------NALAFSMDGQTIFSGHID----------------GNLRLWDIQTGKLLSEVAAHS 256 (373)
Q Consensus 218 -------------------------~~~~~~~~g~~l~sg~~d----------------g~i~iwd~~~~~~~~~~~~~~ 256 (373)
...++.++...++.++.+ +.|..+|..+|+.+..+....
T Consensus 219 ~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~ 298 (599)
T 1w6s_A 219 HYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTP 298 (599)
T ss_dssp GGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESST
T ss_pred cccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCC
Confidence 134666777788877665 379999999999887765432
Q ss_pred c--------cceEEEEEc-CCC---CEEEEeeCCCeEEEEEccccceeeeeeecC-------------Cee---------
Q 017314 257 L--------AAVTSISLS-RSG---NIILTSGRDNLHNLFDIRSLEVCGSLRATG-------------NRV--------- 302 (373)
Q Consensus 257 ~--------~~v~~~~~~-~~~---~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~-------------~~~--------- 302 (373)
. ....-+... .+| ..++.++.++.+.++|..+++.+-...... ..+
T Consensus 299 ~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~ 378 (599)
T 1w6s_A 299 HDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRM 378 (599)
T ss_dssp TCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCT
T ss_pred CccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCC
Confidence 1 011112222 567 467778899999999998887765443211 000
Q ss_pred -------------ecCeeeeEECCCCcEEEEEe---------------------------------------CCCcEEEE
Q 017314 303 -------------ASNWSRSCISPDESYVAAGS---------------------------------------ADGSVYIW 330 (373)
Q Consensus 303 -------------~~~~~~~~~s~~~~~l~sgs---------------------------------------~Dg~i~iw 330 (373)
...|...+++|+..++.+.. .+|.|..|
T Consensus 379 ~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~ 458 (599)
T 1w6s_A 379 DHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAY 458 (599)
T ss_dssp TCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEE
T ss_pred CCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEE
Confidence 12355567777766654431 34789999
Q ss_pred EccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 331 SISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 331 d~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
|+.+++.+-.... ..++.+-.....|..+..++.||.|+.|+
T Consensus 459 D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D 500 (599)
T 1w6s_A 459 NAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARD 500 (599)
T ss_dssp CTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEE
T ss_pred ECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEE
Confidence 9999887655431 11221111122456777788899888764
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.95 E-value=1e-05 Score=80.66 Aligned_cols=269 Identities=11% Similarity=0.112 Sum_probs=167.1
Q ss_pred cCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccc-------cccceEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 017314 88 EGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYG-------CLGSVLDLAITHDNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 160 (373)
...|.++...+++...+ |+.++-+.+||..+++....... ....|.++...++|...+. +.+ -+.+||..
T Consensus 214 ~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIG-TFN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEE-ESS-CEEEEETT
T ss_pred CCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEE-eCC-hhheEcCC
Confidence 45688888888776555 44444588899887654332211 1356899999888876554 444 68999988
Q ss_pred CCeeEEEeec-------CCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEee--------cCceeEEEEccC
Q 017314 161 SGRVRHTLTG-------HTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF--------HSNCNALAFSMD 225 (373)
Q Consensus 161 ~~~~~~~~~~-------h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~--------~~~~~~~~~~~~ 225 (373)
+++....... ....|.++...+ ...+..|+.++-|..|+...+... .+.. ...+.++...++
T Consensus 291 ~~~~~~~~~~~~~~~~l~~~~i~~i~~D~--~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~ 367 (795)
T 4a2l_A 291 TDSFASYSSNPVENGSLSQRSVRSIFMDS--QGGMWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKD 367 (795)
T ss_dssp TTEEEEECCCTTSTTSCSSSCEEEEEECT--TSCEEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTT
T ss_pred CCeEEEEecCCCCCCCCCCCcEEEEEEeC--CcCEEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCC
Confidence 8765443221 235688876654 345777888888999987655322 1211 234788888888
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeeEEEec-------ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeec
Q 017314 226 GQTIFSGHIDGNLRLWDIQTGKLLSEVAA-------HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRAT 298 (373)
Q Consensus 226 g~~l~sg~~dg~i~iwd~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~ 298 (373)
|.. -.|+.++-|..||..+++...-... -....|.++..+++++.|..|+.++-+..+|..+.+.. .+...
T Consensus 368 g~l-WiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~ 445 (795)
T 4a2l_A 368 KNL-WIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQR 445 (795)
T ss_dssp SCE-EEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTT
T ss_pred CCE-EEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecC
Confidence 874 4577777799999887654322111 11256899999999984555666667888988765432 22211
Q ss_pred CCee-ecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEecc------CCccEEEEEEcCCCCcEEEEeCCC
Q 017314 299 GNRV-ASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE------HTAPVLSCSWSGLGKPLASADKNG 367 (373)
Q Consensus 299 ~~~~-~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~------h~~~V~~~~~s~~g~~l~s~s~dg 367 (373)
.... ...+..+...++|.+.+. +.+| |.+|+..+++....... +...|.++...++|+..+.+. +|
T Consensus 446 ~~~l~~~~v~~i~~d~~g~lwig-t~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~G 518 (795)
T 4a2l_A 446 NSQLVNENVYAILPDGEGNLWLG-TLSA-LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EG 518 (795)
T ss_dssp TSCCSCSCEEEEEECSSSCEEEE-ESSC-EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SC
T ss_pred CCCcCCCeeEEEEECCCCCEEEE-ecCc-eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-Cc
Confidence 1101 112233455667765544 4454 88999887765433211 235789999999988655444 45
No 256
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.93 E-value=2.9e-06 Score=72.64 Aligned_cols=204 Identities=10% Similarity=0.021 Sum_probs=129.1
Q ss_pred CcEEEEEEcCCCCEEE-EeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCeeEE
Q 017314 89 GGCASILFEYNSARLI-SGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNSGRVRH 166 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~ 166 (373)
.....+++++++..|+ +-..++.|..++...+.....+.........+++++++..++.+. ..+.|.+++++......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 3567899999766555 445678999999876544333322334678899999876666554 56789999987543322
Q ss_pred EeecCCCcEEEEEEeeCCCCEEEEEeC--CCcEEEEEccCCeeeeEEe-e-cCceeEEEEccCCCEEEEE-eCCCcEEEE
Q 017314 167 TLTGHTDKVCAVDVSKISSRHVVSAAY--DRTLKVWDLHKGYCVNTII-F-HSNCNALAFSMDGQTIFSG-HIDGNLRLW 241 (373)
Q Consensus 167 ~~~~h~~~v~~~~~~~~~~~~~~s~s~--D~~i~vwd~~~~~~~~~~~-~-~~~~~~~~~~~~g~~l~sg-~~dg~i~iw 241 (373)
.+.........+++++..+..+++... .+.|..+++.... ...+. . -...+.++++|++..|+.+ ...+.|..+
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~ 194 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECL 194 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEE
Confidence 222222456788888744444444433 4688888875432 22221 1 1346889999988777654 456789999
Q ss_pred ECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeee
Q 017314 242 DIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLR 296 (373)
Q Consensus 242 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~ 296 (373)
|+........+.. ......++++ .+.++++....+.|..+|..+++....+.
T Consensus 195 ~~~g~~~~~~~~~--~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 195 NPAQPGRRKVLEG--LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp ETTEEEEEEEEEC--CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCceEEEecC--CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 9976543333322 1334566665 44555555567889999998877766664
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.91 E-value=8.1e-06 Score=71.44 Aligned_cols=223 Identities=11% Similarity=0.055 Sum_probs=132.9
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCC-C-cEEEEEccCCeeee
Q 017314 132 SVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYD-R-TLKVWDLHKGYCVN 209 (373)
Q Consensus 132 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D-~-~i~vwd~~~~~~~~ 209 (373)
....++++++++.+++-..++.|..||.... ....+. -......+++.+ +++++++.... + .|..+|..++....
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 4567899999886666667889999998754 333332 234577888876 45555554432 2 46667777766432
Q ss_pred EEeec--CceeEEEEccCCCEEEEEeCCCcEEEEECCCCee-eEEEec--------ccccceEEEEEcCCCCEE-EEeeC
Q 017314 210 TIIFH--SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKL-LSEVAA--------HSLAAVTSISLSRSGNII-LTSGR 277 (373)
Q Consensus 210 ~~~~~--~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~-~~~~~~--------~~~~~v~~~~~~~~~~~l-~s~~~ 277 (373)
..... .....++..+++..+++-..++.|..+|..+++. +..... ......+.+ +++++.| ++...
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~ 187 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE 187 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC
Confidence 22211 1234555556555455555688999999876531 111100 111234455 7787755 45556
Q ss_pred CCeEEEEEccc-cce--eeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEE--EeccCCccEEEEE
Q 017314 278 DNLHNLFDIRS-LEV--CGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVR--TLKEHTAPVLSCS 352 (373)
Q Consensus 278 d~~i~~~d~~~-~~~--~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~--~l~~h~~~V~~~~ 352 (373)
.+.|..||+.. ... ...+.. . .....++++++|.+.++....+.|.+++.. ++... .+.......++++
T Consensus 188 ~~~I~~~~~~~~g~~~~~~~~~~-~----~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 188 KMLLLRIPVDSTDKPGEPEIFVE-Q----TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp TTEEEEEEBCTTSCBCCCEEEEE-S----CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred CCEEEEEEeCCCCCCCccEEEec-c----CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 78899999864 211 111110 0 011236789999988887778899999975 55532 3333334578999
Q ss_pred Ec---CCCCcEEEEeC
Q 017314 353 WS---GLGKPLASADK 365 (373)
Q Consensus 353 ~s---~~g~~l~s~s~ 365 (373)
|. |+++.|..++.
T Consensus 262 ~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 262 FGQTEGDCTAIYVVTN 277 (306)
T ss_dssp ECCSTTTTTEEEEEEC
T ss_pred EecccCCCCEEEEECC
Confidence 99 89876655544
No 258
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.91 E-value=1.7e-06 Score=82.78 Aligned_cols=259 Identities=14% Similarity=0.123 Sum_probs=156.2
Q ss_pred CCEEEEeeCCCcEEEEeCCCCceeeecccccc----ceE-EEEEcC---CCC-EEEEEeC------CCcEEEEEcCCCee
Q 017314 100 SARLISGGQDKSIKLWDTNTGSLSSTLYGCLG----SVL-DLAITH---DNR-SVIAASS------SNNLYVWDVNSGRV 164 (373)
Q Consensus 100 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~----~v~-~~~~~~---~~~-~l~s~s~------d~~i~iwd~~~~~~ 164 (373)
+..++.++.|+.|.-+|..+|+.+-....... .+. .-.+.. +++ .++.++. ++.|+-+|..+|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 56788889999999999999987644322110 111 011111 233 5665543 78999999999988
Q ss_pred EEEeecCCCcE-----------------------------------------EEEEEeeCCCCEEEEEeC----------
Q 017314 165 RHTLTGHTDKV-----------------------------------------CAVDVSKISSRHVVSAAY---------- 193 (373)
Q Consensus 165 ~~~~~~h~~~v-----------------------------------------~~~~~~~~~~~~~~s~s~---------- 193 (373)
+.........+ ...++.+ ....++.+..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~-~~g~vyv~~gn~~~~~~~~r 275 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDA-ETNTIIVGAGNPGPWNTWAR 275 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEET-TTTEEEEEECCBSSSCGGGG
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcC-CCCEEEEeCCCCCcccCccc
Confidence 77654211000 0122333 2345554442
Q ss_pred ----------C----CcEEEEEccCCeeeeEEeec-C---------ceeEEEEc-cCCC---EEEEEeCCCcEEEEECCC
Q 017314 194 ----------D----RTLKVWDLHKGYCVNTIIFH-S---------NCNALAFS-MDGQ---TIFSGHIDGNLRLWDIQT 245 (373)
Q Consensus 194 ----------D----~~i~vwd~~~~~~~~~~~~~-~---------~~~~~~~~-~~g~---~l~sg~~dg~i~iwd~~~ 245 (373)
| ++|.-+|..+|+.+-.+... . ....+... .+|+ .++.++.+|.++++|..+
T Consensus 276 ~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~t 355 (582)
T 1flg_A 276 TAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSN 355 (582)
T ss_dssp SCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTT
T ss_pred ccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCC
Confidence 2 68999999999887666432 1 11112222 4674 678899999999999999
Q ss_pred CeeeEEEecccc------------cc--------------------------------eEEEEEcCCCCEEEEee-----
Q 017314 246 GKLLSEVAAHSL------------AA--------------------------------VTSISLSRSGNIILTSG----- 276 (373)
Q Consensus 246 ~~~~~~~~~~~~------------~~--------------------------------v~~~~~~~~~~~l~s~~----- 276 (373)
|+.+..+..... .. -..++++|+..+++...
T Consensus 356 G~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~ 435 (582)
T 1flg_A 356 GKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKE 435 (582)
T ss_dssp CCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEE
T ss_pred CCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcce
Confidence 998876544310 00 01346677655554432
Q ss_pred ----------------------------CCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEE
Q 017314 277 ----------------------------RDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVY 328 (373)
Q Consensus 277 ----------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~ 328 (373)
.++.+..||+.+++..-+.......... .+...+.+++.|+.||.++
T Consensus 436 ~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g-----~~~tagglvf~g~~dg~l~ 510 (582)
T 1flg_A 436 DYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAG-----VLATAGNLVFTGTGDGYFK 510 (582)
T ss_dssp EEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSC-----CEEETTTEEEEECTTSEEE
T ss_pred eeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCccc-----ceEeCCCEEEEECCCCcEE
Confidence 2567888888887765444332211111 1122466777899999999
Q ss_pred EEEccCceEEEEeccCCccE-EEEEEcCCCC-cEEEEe
Q 017314 329 IWSISKADIVRTLKEHTAPV-LSCSWSGLGK-PLASAD 364 (373)
Q Consensus 329 iwd~~~~~~~~~l~~h~~~V-~~~~~s~~g~-~l~s~s 364 (373)
.||..+|+.+-.++...+.+ .-+.|..+|+ |++..+
T Consensus 511 A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~ 548 (582)
T 1flg_A 511 AFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYLGVTV 548 (582)
T ss_dssp EEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred EEECCCCCEEEEecCCCCcccCceEEEECCEEEEEEEc
Confidence 99999999988776533221 2256777887 555543
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.89 E-value=1.8e-06 Score=76.24 Aligned_cols=229 Identities=10% Similarity=0.033 Sum_probs=141.3
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeec-------------------CCCcEEEEEEeeCCCCEEEEEeC
Q 017314 133 VLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTG-------------------HTDKVCAVDVSKISSRHVVSAAY 193 (373)
Q Consensus 133 v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~-------------------h~~~v~~~~~~~~~~~~~~s~s~ 193 (373)
..++++.++++.++++..++.|..||..+++....... ....+.++++.+.++ .++.+..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g-~l~v~d~ 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNN-QLYIVDC 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTT-EEEEEET
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCC-cEEEEEC
Confidence 45678889988788888899999999877654321110 012467787765234 4555655
Q ss_pred CCcEEEEEccCCeeeeEEee------cCceeEEEEcc-CCCEEEEEeC-----------------CCcEEEEECCCCeee
Q 017314 194 DRTLKVWDLHKGYCVNTIIF------HSNCNALAFSM-DGQTIFSGHI-----------------DGNLRLWDIQTGKLL 249 (373)
Q Consensus 194 D~~i~vwd~~~~~~~~~~~~------~~~~~~~~~~~-~g~~l~sg~~-----------------dg~i~iwd~~~~~~~ 249 (373)
.+.+..+|..++.. ..+.. ....+.+++.+ +|+..++-.. ++.|..||..+++..
T Consensus 100 ~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 100 YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 56688888765532 12211 12367899999 9987666432 367889998777643
Q ss_pred EEEecccccceEEEEEcCCCCEEE-EeeCCCeEEEEEccccc--eeeeeeecCCeeecCeeeeEECCCCcEEEEEeC---
Q 017314 250 SEVAAHSLAAVTSISLSRSGNIIL-TSGRDNLHNLFDIRSLE--VCGSLRATGNRVASNWSRSCISPDESYVAAGSA--- 323 (373)
Q Consensus 250 ~~~~~~~~~~v~~~~~~~~~~~l~-s~~~d~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~--- 323 (373)
..... ......++++|+++.|. +....+.|..|++.... ....+..... ...++++++|.+.++...
T Consensus 179 ~~~~~--~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-----P~gi~~d~~G~l~va~~~~~~ 251 (322)
T 2fp8_A 179 LLLKE--LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-----PGNIKRNADGHFWVSSSEELD 251 (322)
T ss_dssp EEEEE--ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-----EEEEEECTTSCEEEEEEEETT
T ss_pred EeccC--CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-----CCCeEECCCCCEEEEecCccc
Confidence 22221 13456799999998554 44566889999986421 1111111111 223678999987776544
Q ss_pred -------CCcEEEEEccCceEEEEeccCC----ccEEEEEEcCCCCcEEEEeCCCeEEEc
Q 017314 324 -------DGSVYIWSISKADIVRTLKEHT----APVLSCSWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 324 -------Dg~i~iwd~~~~~~~~~l~~h~----~~V~~~~~s~~g~~l~s~s~dg~i~iW 372 (373)
.+.|..+|. .++.+..+.... ..+.++++ .+|+..++....+.|.++
T Consensus 252 ~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 252 GNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGIL 309 (322)
T ss_dssp SSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEE
T ss_pred ccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEE
Confidence 467888886 477776665432 34667777 456666665566777654
No 260
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.89 E-value=1.3e-05 Score=79.93 Aligned_cols=268 Identities=11% Similarity=0.164 Sum_probs=163.7
Q ss_pred EEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeec-cccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q 017314 91 CASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTL-YGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLT 169 (373)
Q Consensus 91 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 169 (373)
|.++...+++...+ |+.++-|..||..+++..... ......|.++...+++.+.+ ++.++-+.+||..+++......
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~~~~~ 252 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWV-ATEGAGLFLINPKTKEIKNYLH 252 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEE-EEBSSCEEEEETTTTEEEEECC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEE-EECCCCeEEEeCCCCeEEEeec
Confidence 77888887776554 566556888998776543321 11245688888777776444 5555558999988876543322
Q ss_pred c-------CCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe--------ecCceeEEEEccCCCEEEEEeC
Q 017314 170 G-------HTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII--------FHSNCNALAFSMDGQTIFSGHI 234 (373)
Q Consensus 170 ~-------h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~--------~~~~~~~~~~~~~g~~l~sg~~ 234 (373)
. ....|.++...+ .+ .+..|..+ -|.+||..++....... ....+.++...++|.. -.|+.
T Consensus 253 ~~~~~~~l~~~~i~~i~~d~-~g-~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~l-Wigt~ 328 (795)
T 4a2l_A 253 SPSNPKSISSNYIRSLAMDS-QN-RLWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGM-WLGTY 328 (795)
T ss_dssp CTTCTTSCSCSBEEEEEECT-TS-CEEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCE-EEEES
T ss_pred CCCCccccCCCeEEEEEEcC-CC-CEEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCE-EEEEC
Confidence 1 135688876654 33 45556655 58899987765432211 1134788888888874 45677
Q ss_pred CCcEEEEECCCCeeeEEEec------ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCC---ee-ec
Q 017314 235 DGNLRLWDIQTGKLLSEVAA------HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGN---RV-AS 304 (373)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~---~~-~~ 304 (373)
++-|..|+..++... .+.. -....|.++..+++|++.+ |+.++-+..||..+............ .. ..
T Consensus 329 ~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~ 406 (795)
T 4a2l_A 329 FGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQEDESARGIGSN 406 (795)
T ss_dssp SSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC------CCSCS
T ss_pred CCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecCCCCcccCCCCc
Confidence 777889987654322 2211 1124699999999988665 45555677888765433221111100 00 12
Q ss_pred CeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEec----cCCccEEEEEEcCCCCcEEEEeCCC
Q 017314 305 NWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLK----EHTAPVLSCSWSGLGKPLASADKNG 367 (373)
Q Consensus 305 ~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~----~h~~~V~~~~~s~~g~~l~s~s~dg 367 (373)
.+..++.+++|.+|..|+.++-|.+||..+++...... .+...|.++...++|+..+.+. +|
T Consensus 407 ~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~G 472 (795)
T 4a2l_A 407 NIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SA 472 (795)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SC
T ss_pred cEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-Cc
Confidence 23345566788756678877779999998876544322 1345799999999888555443 44
No 261
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.88 E-value=1e-06 Score=84.19 Aligned_cols=254 Identities=12% Similarity=0.060 Sum_probs=152.7
Q ss_pred EEEeeCCCcEEEEeCCCCceeeeccccc----cceEE-EEEcCCCCEEEEEe------CCCcEEEEEcCCCeeEEEeecC
Q 017314 103 LISGGQDKSIKLWDTNTGSLSSTLYGCL----GSVLD-LAITHDNRSVIAAS------SSNNLYVWDVNSGRVRHTLTGH 171 (373)
Q Consensus 103 l~s~s~D~~v~iwd~~~~~~~~~~~~~~----~~v~~-~~~~~~~~~l~s~s------~d~~i~iwd~~~~~~~~~~~~h 171 (373)
++.++.|+.|.-+|..+|+.+-...... ..+.+ -.+ .++ .++.++ .++.|+.+|..+|+.+..+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 8888999999999999998754432111 01111 111 133 455554 3789999999999988766532
Q ss_pred CCc-------------------------------------EE-EEEEeeCCCCEEEEEeCC----------------CcE
Q 017314 172 TDK-------------------------------------VC-AVDVSKISSRHVVSAAYD----------------RTL 197 (373)
Q Consensus 172 ~~~-------------------------------------v~-~~~~~~~~~~~~~s~s~D----------------~~i 197 (373)
... +. ..++.+ ....++.+..+ .+|
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv 280 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-GTNLIYFGTGNPAPWNETMRPGDNKWTMTI 280 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGSCSCCTTSSEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeC-CCCEEEEeCCCCccccCcccCCCccccceE
Confidence 111 00 122333 34566666554 478
Q ss_pred EEEEccCCeeeeEEeecCc----------eeEEEEc-cCC---CEEEEEeCCCcEEEEECCCCeeeEEEeccc-------
Q 017314 198 KVWDLHKGYCVNTIIFHSN----------CNALAFS-MDG---QTIFSGHIDGNLRLWDIQTGKLLSEVAAHS------- 256 (373)
Q Consensus 198 ~vwd~~~~~~~~~~~~~~~----------~~~~~~~-~~g---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~------- 256 (373)
.-+|..+|+.+-.+..... ...+... .+| ..++.++.+|.+.++|..+|+.+.......
T Consensus 281 ~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 281 FGRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence 9999999988766544211 1112222 567 467789999999999999999887654221
Q ss_pred -----ccce--------------------------EEEEEcCCCCEEEEee-----------------------------
Q 017314 257 -----LAAV--------------------------TSISLSRSGNIILTSG----------------------------- 276 (373)
Q Consensus 257 -----~~~v--------------------------~~~~~~~~~~~l~s~~----------------------------- 276 (373)
..++ ..++++|+..+++...
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 0001 2456777766655432
Q ss_pred ----------CCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCc
Q 017314 277 ----------RDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTA 346 (373)
Q Consensus 277 ----------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~ 346 (373)
.++.+..||+.+++..-+....... +. ..+...+.+++.|+.||.|+.||..+|+.+-.++-..+
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~~~----~~-g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g 515 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKMERFAV----WG-GTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSG 515 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEESSCC----CS-BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecCCCCc----cC-cceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCC
Confidence 2356777777776654443321110 11 11223566777799999999999999999877753321
Q ss_pred c-EEEEEEcCCCC-cEEEEe
Q 017314 347 P-VLSCSWSGLGK-PLASAD 364 (373)
Q Consensus 347 ~-V~~~~~s~~g~-~l~s~s 364 (373)
. ..-+.|..+|+ |+++.+
T Consensus 516 ~~~~P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 516 AIGYPMTYTHKGTQYVAIYY 535 (599)
T ss_dssp CCSCCEEEEETTEEEEEEEE
T ss_pred cEeccEEEEeCCEEEEEEEc
Confidence 1 12245667786 555543
No 262
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.85 E-value=1.3e-05 Score=70.13 Aligned_cols=232 Identities=10% Similarity=0.023 Sum_probs=136.2
Q ss_pred eEEecCccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCC--cEEEEE
Q 017314 81 KHKINAHEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSN--NLYVWD 158 (373)
Q Consensus 81 ~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~--~i~iwd 158 (373)
...+... .....+++++++..+++-..++.|..||.... ....+ .....+..+++.++++.+++....+ .|..+|
T Consensus 25 ~~~~p~~-~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~-~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d 101 (306)
T 2p4o_A 25 ITSFPVN-TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHA-TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLV 101 (306)
T ss_dssp EEEECTT-CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEE-ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEE
T ss_pred eEeCCCC-CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEE-eCCCCceeEEEcCCCcEEEEeccCCcceEEEEc
Confidence 3444332 45678999999997777778899999998754 32222 2234678899999999666554433 466778
Q ss_pred cCCCeeEEEeec-CCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCee-eeEEe------e---c-CceeEEEEccCC
Q 017314 159 VNSGRVRHTLTG-HTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYC-VNTII------F---H-SNCNALAFSMDG 226 (373)
Q Consensus 159 ~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~-~~~~~------~---~-~~~~~~~~~~~g 226 (373)
..+++....... .......++..+ ....+++-+.++.|..+|...+.. +.... . . ...+.+ +|++
T Consensus 102 ~~~g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg 178 (306)
T 2p4o_A 102 KSDGTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFG 178 (306)
T ss_dssp CTTSCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEET
T ss_pred CCCCeEEEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCC
Confidence 777765433221 112223333322 333445555688888888765421 11000 0 0 124555 8888
Q ss_pred CEEEEE-eCCCcEEEEECCC-Cee--eEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEcccccee--eeeeecCC
Q 017314 227 QTIFSG-HIDGNLRLWDIQT-GKL--LSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVC--GSLRATGN 300 (373)
Q Consensus 227 ~~l~sg-~~dg~i~iwd~~~-~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~--~~~~~~~~ 300 (373)
..|+.+ ...+.|..+|+.. ++. ...+.. ......++++++|+++++....+.|.++|.. ++.. ..+...
T Consensus 179 ~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~-- 253 (306)
T 2p4o_A 179 NFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQG-- 253 (306)
T ss_dssp TEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGT--
T ss_pred CEEEEEeCCCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccc--
Confidence 877654 4577899999874 332 111111 1245668999999988888778889999865 3321 111111
Q ss_pred eeecCeeeeEEC---CCCcEEEEEeCCC
Q 017314 301 RVASNWSRSCIS---PDESYVAAGSADG 325 (373)
Q Consensus 301 ~~~~~~~~~~~s---~~~~~l~sgs~Dg 325 (373)
. .....++|. |++..|...+..+
T Consensus 254 -~-~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 254 -V-IGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp -C-TTEEEEEECCSTTTTTEEEEEECTT
T ss_pred -c-CCceEEEEecccCCCCEEEEECCCC
Confidence 1 112346677 7876665555433
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.82 E-value=4.1e-06 Score=80.09 Aligned_cols=271 Identities=15% Similarity=0.140 Sum_probs=162.7
Q ss_pred CCEEEEeeCCCcEEEEeCCCCceeeeccccccc---------eEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeec
Q 017314 100 SARLISGGQDKSIKLWDTNTGSLSSTLYGCLGS---------VLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTG 170 (373)
Q Consensus 100 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 170 (373)
+..++.++.++.|.-+|..+|+.+=.+...... ...+++ .+..++.++.|+.+.-+|..+|+.+.....
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 445666666445999999999875443322110 011222 356788889999999999999998876653
Q ss_pred CCC----cEE-EEEEeeC--CCC-EEEEEe------CCCcEEEEEccCCeeeeEEeecCc--------------------
Q 017314 171 HTD----KVC-AVDVSKI--SSR-HVVSAA------YDRTLKVWDLHKGYCVNTIIFHSN-------------------- 216 (373)
Q Consensus 171 h~~----~v~-~~~~~~~--~~~-~~~s~s------~D~~i~vwd~~~~~~~~~~~~~~~-------------------- 216 (373)
... .+. .-.+... .++ .++.++ .++.|.-+|..+|+.+-.......
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~ 225 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPS 225 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCTTCTT
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccccccc
Confidence 321 111 0011111 111 555554 378999999999887654432100
Q ss_pred ----------------------eeEEEEccCCCEEEEEeC--------------------C----CcEEEEECCCCeeeE
Q 017314 217 ----------------------CNALAFSMDGQTIFSGHI--------------------D----GNLRLWDIQTGKLLS 250 (373)
Q Consensus 217 ----------------------~~~~~~~~~g~~l~sg~~--------------------d----g~i~iwd~~~~~~~~ 250 (373)
-...++.|+...++.+.. | +.|..+|..+|+.+.
T Consensus 226 w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W 305 (582)
T 1flg_A 226 WPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKW 305 (582)
T ss_dssp SCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEE
T ss_pred CCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEE
Confidence 023566777778876663 2 589999999999988
Q ss_pred EEecccc--------cceEEEEEc-CCCC---EEEEeeCCCeEEEEEccccceeeeeeecC-------------Cee---
Q 017314 251 EVAAHSL--------AAVTSISLS-RSGN---IILTSGRDNLHNLFDIRSLEVCGSLRATG-------------NRV--- 302 (373)
Q Consensus 251 ~~~~~~~--------~~v~~~~~~-~~~~---~l~s~~~d~~i~~~d~~~~~~~~~~~~~~-------------~~~--- 302 (373)
.+..... ....-+... .+|+ .++.++.++.+.++|..+++.+-.+.... ..+
T Consensus 306 ~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~ 385 (582)
T 1flg_A 306 FYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVERE 385 (582)
T ss_dssp EEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECT
T ss_pred EEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEcc
Confidence 7753210 111112222 4674 78889999999999998887765443221 000
Q ss_pred -------------------------ecCeeeeEECCCCcEEEEEe---------------------------------CC
Q 017314 303 -------------------------ASNWSRSCISPDESYVAAGS---------------------------------AD 324 (373)
Q Consensus 303 -------------------------~~~~~~~~~s~~~~~l~sgs---------------------------------~D 324 (373)
...|...+++|+..++.+.. .+
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~ 465 (582)
T 1flg_A 386 GQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHV 465 (582)
T ss_dssp TCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCS
T ss_pred ccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCc
Confidence 01244556777655554432 36
Q ss_pred CcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEEEcC
Q 017314 325 GSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 325 g~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW~ 373 (373)
|.|+.||+.+++.+-....+. ++..-.....+..++.++.||.++.|+
T Consensus 466 G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D 513 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFD 513 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEE
T ss_pred ceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEE
Confidence 889999999998875544321 221111112366777789999998764
No 264
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.79 E-value=1.6e-05 Score=71.03 Aligned_cols=244 Identities=9% Similarity=0.065 Sum_probs=146.2
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCeeEEEe
Q 017314 90 GCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~ 168 (373)
..++....+++.++++ ....|+..++........+.+ ...+..++|++.++.|+.+. ..+.|+.+++..+.....+
T Consensus 35 ~~~C~~~~~~~~ll~~--~~~~I~~i~~~g~~~~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 111 (349)
T 3v64_C 35 RRSCKALGPEPVLLFA--NRIDIRQVLPHRSEYTLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 111 (349)
T ss_dssp SSCEEESSSCCEEEEE--CBSCEEEECTTSCCEEEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred CCcccccccCceeEee--cccceEEEeCCCCeeEEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEE
Confidence 3345555554433333 345688888876554333332 34577899998777776655 5678999998876544444
Q ss_pred ecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCCEEEEE-eCC-CcEEEEECCC
Q 017314 169 TGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQTIFSG-HID-GNLRLWDIQT 245 (373)
Q Consensus 169 ~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~sg-~~d-g~i~iwd~~~ 245 (373)
.........+++.+..++..++-...+.|.+.++............ ...+.+++.|.+..|+.. ... +.|..+++..
T Consensus 112 ~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG 191 (349)
T 3v64_C 112 STGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 191 (349)
T ss_dssp CSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred eCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC
Confidence 3333445677887656666677777889999998754322211111 347889999966666544 444 7888888864
Q ss_pred CeeeEEEecccccceEEEEEcCCCCEE-EEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCC
Q 017314 246 GKLLSEVAAHSLAAVTSISLSRSGNII-LTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSAD 324 (373)
Q Consensus 246 ~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~D 324 (373)
.. ...+..........++++|++..| ++-...+.|..+|+..... ..+.... ...+. .+++ ..+..+++-...
T Consensus 192 ~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~~~--~~~P~-giav-~~~~ly~td~~~ 265 (349)
T 3v64_C 192 SG-RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQG--LPHPF-AITV-FEDSLYWTDWHT 265 (349)
T ss_dssp CS-CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSS--CSSEE-EEEE-ETTEEEEEETTT
T ss_pred CC-cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEeCC--CCCce-EEEE-ECCEEEEecCCC
Confidence 32 233322223467899999866655 4455667888888764221 1111111 11111 2344 345566666677
Q ss_pred CcEEEEEccCceEEEEec
Q 017314 325 GSVYIWSISKADIVRTLK 342 (373)
Q Consensus 325 g~i~iwd~~~~~~~~~l~ 342 (373)
+.|...+..+++....+.
T Consensus 266 ~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 266 KSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TEEEEEETTTCCSCEEEE
T ss_pred CeEEEEEccCCCccEEec
Confidence 888888866676655554
No 265
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.74 E-value=7.3e-05 Score=65.70 Aligned_cols=228 Identities=9% Similarity=0.040 Sum_probs=137.9
Q ss_pred CcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCC----CeeEEEeecCCCcEEEEEEeeCC
Q 017314 110 KSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNS----GRVRHTLTGHTDKVCAVDVSKIS 184 (373)
Q Consensus 110 ~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~----~~~~~~~~~h~~~v~~~~~~~~~ 184 (373)
..|+..|+.+......+. ....+..++|+++++.|+.+. ..+.|..+++.+ ......+...-.....+++.+..
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 568888988765544333 344577899998777666555 457899999876 22222333223445678887655
Q ss_pred CCEEEEEeCCCcEEEEEccCCeeeeEEe-ecCceeEEEEccCCCEEEEEeCC--CcEEEEECCCCeeeEEEecccccceE
Q 017314 185 SRHVVSAAYDRTLKVWDLHKGYCVNTII-FHSNCNALAFSMDGQTIFSGHID--GNLRLWDIQTGKLLSEVAAHSLAAVT 261 (373)
Q Consensus 185 ~~~~~s~s~D~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~sg~~d--g~i~iwd~~~~~~~~~~~~~~~~~v~ 261 (373)
++..++-...+.|.+.|+........+. .......+++.|.+..|+.+... +.|...++.. .....+.........
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~ 167 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPN 167 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCce
Confidence 6666676778999999987543322222 12357889999977766655443 6888888753 333333322335678
Q ss_pred EEEEcCCCCEEE-EeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEE
Q 017314 262 SISLSRSGNIIL-TSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRT 340 (373)
Q Consensus 262 ~~~~~~~~~~l~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~ 340 (373)
.+++++++..|. +-+..+.|..+|+.... ...+.........+. .+++. .+.++++-...+.|..++..+++.+..
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~-giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~ 244 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPF-SLAVF-EDKVFWTDIINEAIFSANRLTGSDVNL 244 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEE-EEEEE-TTEEEEEETTTTEEEEEETTTCCCCEE
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcE-EEEEE-CCEEEEEECCCCeEEEEeCCCCcceEE
Confidence 999998766554 44566789999986422 122211111111111 23443 356666677778899999877765555
Q ss_pred ec
Q 017314 341 LK 342 (373)
Q Consensus 341 l~ 342 (373)
+.
T Consensus 245 i~ 246 (316)
T 1ijq_A 245 LA 246 (316)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 266
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.71 E-value=1.9e-05 Score=72.69 Aligned_cols=237 Identities=10% Similarity=0.072 Sum_probs=138.2
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEE-EEEeCCC----cEEEEEccCC
Q 017314 132 SVLDLAITH-DNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHV-VSAAYDR----TLKVWDLHKG 205 (373)
Q Consensus 132 ~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-~s~s~D~----~i~vwd~~~~ 205 (373)
....++++| ++..|+.+...+.|+.+|+.++....... .......+++++ +++.+ ++...++ .+.+.+. .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeC-CC
Confidence 456789998 46667777666889999998876554433 445577888887 45644 4443222 2333343 33
Q ss_pred eee--eEEeecCceeEEEEcc-CCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCC-EEEEeeCCCeE
Q 017314 206 YCV--NTIIFHSNCNALAFSM-DGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGN-IILTSGRDNLH 281 (373)
Q Consensus 206 ~~~--~~~~~~~~~~~~~~~~-~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i 281 (373)
... ..+........++++| +|..+++-..++.|..+|..++................++|+|+++ ++++....+.|
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 221 2233334467889999 6776667667889999999876643222222223577899999999 45555667888
Q ss_pred EEEEcccc--ce--eeeeeec-C-----C------eeecCeeeeEE--------CCCCcEEEEEeCCCcEEEEEccCceE
Q 017314 282 NLFDIRSL--EV--CGSLRAT-G-----N------RVASNWSRSCI--------SPDESYVAAGSADGSVYIWSISKADI 337 (373)
Q Consensus 282 ~~~d~~~~--~~--~~~~~~~-~-----~------~~~~~~~~~~~--------s~~~~~l~sgs~Dg~i~iwd~~~~~~ 337 (373)
..++.... .. ...+... + . ....+...+++ .++|.+.++=.....|+.++ .++..
T Consensus 295 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v 373 (430)
T 3tc9_A 295 LRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRV 373 (430)
T ss_dssp EEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEE
T ss_pred EEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcE
Confidence 88876531 11 1111111 0 0 01111112333 24466666666677888888 45544
Q ss_pred EEEecc----C-------------CccEEEEEEcCC-CCcEEEEeCCCeEEEc
Q 017314 338 VRTLKE----H-------------TAPVLSCSWSGL-GKPLASADKNGVVCVW 372 (373)
Q Consensus 338 ~~~l~~----h-------------~~~V~~~~~s~~-g~~l~s~s~dg~i~iW 372 (373)
...... . -..-..++++|+ |.++++-..+..|+..
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 426 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKI 426 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEE
Confidence 332211 0 113589999995 5555555556667653
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.70 E-value=3e-05 Score=70.27 Aligned_cols=252 Identities=9% Similarity=0.052 Sum_probs=149.1
Q ss_pred EEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCeeEEEeecC
Q 017314 93 SILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNSGRVRHTLTGH 171 (373)
Q Consensus 93 ~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~h 171 (373)
+.+..+.+ +|+- +....|+..++........+. ....+..++|.+.+..|+.+. ..+.|+.+++..+.....+...
T Consensus 81 C~~~~~~~-~l~~-~~~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 81 CKALGPEP-VLLF-ANRIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp EEECSSCC-EEEE-ECBSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred ECCccccc-eeEe-ecCccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence 44444433 3333 334678888987665433333 334577899998777666554 5678999998876544444333
Q ss_pred CCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-CceeEEEEccCCCEEEEEe-CC-CcEEEEECCCCee
Q 017314 172 TDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQTIFSGH-ID-GNLRLWDIQTGKL 248 (373)
Q Consensus 172 ~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~sg~-~d-g~i~iwd~~~~~~ 248 (373)
......+++.+..+++.++-...+.|.+.++........+... ...+.+++.|.+..|+... .. +.|..+++....
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~- 236 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG- 236 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-
Confidence 3345567777655666677777788888887644322222111 3478899999777666544 34 678888886433
Q ss_pred eEEEecccccceEEEEEcCCCCEE-EEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcE
Q 017314 249 LSEVAAHSLAAVTSISLSRSGNII-LTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSV 327 (373)
Q Consensus 249 ~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i 327 (373)
...+..........|+++|++..| ++-+..+.|..+|+..... ..+.... ...+. .+++ ..+.++++-...+.|
T Consensus 237 ~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~--~~~P~-giav-~~~~ly~td~~~~~V 311 (386)
T 3v65_B 237 RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQG--LPHPF-AITV-FEDSLYWTDWHTKSI 311 (386)
T ss_dssp CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC-EEEECSS--CSSEE-EEEE-ETTEEEEEETTTTEE
T ss_pred cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee-EEEEECC--CCCce-EEEE-ECCEEEEeeCCCCeE
Confidence 233322223457899999866654 4555667888888764221 1111111 11111 2344 345666677778889
Q ss_pred EEEEccCceEEEEeccCCccEEEEEE
Q 017314 328 YIWSISKADIVRTLKEHTAPVLSCSW 353 (373)
Q Consensus 328 ~iwd~~~~~~~~~l~~h~~~V~~~~~ 353 (373)
..++..+++....+........++++
T Consensus 312 ~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 312 NSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp EEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EEEECCCCcceEEEccCCCCCceEEE
Confidence 99887777666665543233334443
No 268
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.67 E-value=0.00018 Score=71.38 Aligned_cols=274 Identities=11% Similarity=0.049 Sum_probs=162.4
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecc--------------ccccceEEEEEcCCCCEEEEEeCCCcE
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLY--------------GCLGSVLDLAITHDNRSVIAASSSNNL 154 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--------------~~~~~v~~~~~~~~~~~l~s~s~d~~i 154 (373)
..|.++...++|. |..|+..+-|.++|..++....... -....|.++...++|. |..|+.++-|
T Consensus 258 ~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl 335 (781)
T 3v9f_A 258 SYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGI 335 (781)
T ss_dssp CCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCE
T ss_pred ceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeE
Confidence 5688888887776 4445664668888987654322111 1235688998888876 4556777788
Q ss_pred EEEEcCCCeeEEEee---------cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEE----eecCceeEEE
Q 017314 155 YVWDVNSGRVRHTLT---------GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTI----IFHSNCNALA 221 (373)
Q Consensus 155 ~iwd~~~~~~~~~~~---------~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~----~~~~~~~~~~ 221 (373)
..++..++....... -....|.++...+ ...+..|..++-|..||..++...... .....+.++.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~--~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 413 (781)
T 3v9f_A 336 NFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDG--QGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSL 413 (781)
T ss_dssp EEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECT--TSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEE
T ss_pred EEeCCCCCcceeeccCccccccCCCCCcceEEEEEcC--CCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEE
Confidence 899887654332211 0234577776543 345777777777999998755332211 1123477888
Q ss_pred EccCCCEEEEEeCCCcEEEEECCCCeeeEEEec--ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecC
Q 017314 222 FSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAA--HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATG 299 (373)
Q Consensus 222 ~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~ 299 (373)
..++|.+. .|+.++-|..+|..+++.. .+.. .....|.++..++++.+.+... +-+..+|..+.+.........
T Consensus 414 ~d~~g~lW-igt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~ 489 (781)
T 3v9f_A 414 KDSEGNLW-FGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIHHYDTSN 489 (781)
T ss_dssp ECTTSCEE-EEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCEEECTTT
T ss_pred ECCCCCEE-EEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEecccCcc
Confidence 77777654 4677677889998876543 2221 1225789999999888666554 457778876544322111110
Q ss_pred -CeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEecc---CCccEEEEEEcCCCCcEEEEeCCCeEEEc
Q 017314 300 -NRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKE---HTAPVLSCSWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 300 -~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~---h~~~V~~~~~s~~g~~l~s~s~dg~i~iW 372 (373)
......+..++.+++|.+.+ |+.++-|..|+..+++....... ....|.++...++|...+++. +|.|..|
T Consensus 490 ~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~ 564 (781)
T 3v9f_A 490 SQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFP 564 (781)
T ss_dssp SSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEES
T ss_pred cccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEE
Confidence 00012223455677777655 44433378888876654332211 235689999999988555443 6653554
No 269
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.61 E-value=2.4e-05 Score=68.64 Aligned_cols=194 Identities=12% Similarity=0.311 Sum_probs=130.4
Q ss_pred CCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCC----CC---EEEEEeC---CCcEEEEEc--CCCeeEE
Q 017314 99 NSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHD----NR---SVIAASS---SNNLYVWDV--NSGRVRH 166 (373)
Q Consensus 99 ~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~----~~---~l~s~s~---d~~i~iwd~--~~~~~~~ 166 (373)
..++++....++-+.+||+ +|+.+..+.. +.++.+.+-|+ |+ ++++... +++|.+|++ .+++ +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 4466777778889999999 7888877753 45666665542 22 2333333 578999976 3443 33
Q ss_pred Eeec------CC-CcEEEEEE--eeCCCC-EEEEEeCCCcEEEEEcc-------CCeeeeEEeecCceeEEEEccCCCEE
Q 017314 167 TLTG------HT-DKVCAVDV--SKISSR-HVVSAAYDRTLKVWDLH-------KGYCVNTIIFHSNCNALAFSMDGQTI 229 (373)
Q Consensus 167 ~~~~------h~-~~v~~~~~--~~~~~~-~~~s~s~D~~i~vwd~~-------~~~~~~~~~~~~~~~~~~~~~~g~~l 229 (373)
.+.. .. ..+..+++ ++..+. +++....++.+..|++. +.+.++++...+.+..+.+.+....|
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRL 194 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeE
Confidence 3321 11 45566766 443343 67788889999999983 34667888888888899999989999
Q ss_pred EEEeCCCcEEEEECC-----CCeeeEEEe-cccccceEEEEE--cCCCC-EEEE-eeCCCeEEEEEcc-ccceeeeee
Q 017314 230 FSGHIDGNLRLWDIQ-----TGKLLSEVA-AHSLAAVTSISL--SRSGN-IILT-SGRDNLHNLFDIR-SLEVCGSLR 296 (373)
Q Consensus 230 ~sg~~dg~i~iwd~~-----~~~~~~~~~-~~~~~~v~~~~~--~~~~~-~l~s-~~~d~~i~~~d~~-~~~~~~~~~ 296 (373)
+.+-.|.-|..+|.. +++.+..+. .+....+..|++ .++++ +|++ +-.++...+||.. +.+.++.+.
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 999999777777754 344554442 222235777777 55555 5554 4467899999996 677777775
No 270
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.60 E-value=4.6e-05 Score=70.03 Aligned_cols=238 Identities=12% Similarity=0.110 Sum_probs=137.4
Q ss_pred EEEEEEcC-CCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCC-C----cEEEEEcCCCee
Q 017314 91 CASILFEY-NSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSS-N----NLYVWDVNSGRV 164 (373)
Q Consensus 91 v~~~~~~~-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d-~----~i~iwd~~~~~~ 164 (373)
-..++++| ++..|+.+...+.|+.+|+.++...... ........++|+++++.|+.+... + .+.+.+. .+..
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~-~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~ 216 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVY-SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGF 216 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEE-CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTS
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEe-cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCce
Confidence 46789998 4566666665588999999876544333 344567889999999976666542 1 3444443 2221
Q ss_pred E--EEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec--CceeEEEEccCCCEEEE-EeCCCcEE
Q 017314 165 R--HTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH--SNCNALAFSMDGQTIFS-GHIDGNLR 239 (373)
Q Consensus 165 ~--~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~s-g~~dg~i~ 239 (373)
. ..+.. ......+++.|..+..+++-..++.|..+|...+......... ...+.++++|+|++|+. -...+.|.
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~ 295 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYIL 295 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEE
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEE
Confidence 1 22221 2234556677755666666667889999998866542222222 23678999999996554 45677899
Q ss_pred EEECCC--Cee--eEEEecc--------------cccceE-EEEEc--------CCCCEEEEeeCCCeEEEEEcccccee
Q 017314 240 LWDIQT--GKL--LSEVAAH--------------SLAAVT-SISLS--------RSGNIILTSGRDNLHNLFDIRSLEVC 292 (373)
Q Consensus 240 iwd~~~--~~~--~~~~~~~--------------~~~~v~-~~~~~--------~~~~~l~s~~~d~~i~~~d~~~~~~~ 292 (373)
.++... +.. +..+... ...... .++.. +++.++++-...+.|+.++. .+. +
T Consensus 296 ~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~~-~G~-v 373 (430)
T 3tc9_A 296 RSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILTP-QGR-V 373 (430)
T ss_dssp EEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEECT-TSE-E
T ss_pred EEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEECC-CCc-E
Confidence 987653 222 1222211 011223 45553 45677777777788888873 222 2
Q ss_pred eeeeecC--------Ce------eecCeeeeEECC-CCcEEEEEeCCCcEEEEEcc
Q 017314 293 GSLRATG--------NR------VASNWSRSCISP-DESYVAAGSADGSVYIWSIS 333 (373)
Q Consensus 293 ~~~~~~~--------~~------~~~~~~~~~~s~-~~~~l~sgs~Dg~i~iwd~~ 333 (373)
..+...+ .. ....-..++++| ++.++++-.....|+.++++
T Consensus 374 ~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 374 TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 2222210 00 001122356777 46666666666777776653
No 271
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.59 E-value=0.00025 Score=70.45 Aligned_cols=269 Identities=9% Similarity=0.075 Sum_probs=157.2
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccc-------cccceEEEEEcCCCCEEEEEeCCCcEEEEEcCC
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYG-------CLGSVLDLAITHDNRSVIAASSSNNLYVWDVNS 161 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~ 161 (373)
..|.++...+++...+. +.+ -+.+||..++........ ....|.++...++|.+ ..|+..+-+.++|..+
T Consensus 211 ~~i~~i~~d~~g~lwig-t~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~l-Wigt~~~Gl~~~~~~~ 287 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIG-TSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKL-WIATELNGIMILDLQQ 287 (781)
T ss_dssp SSEEEEEECTTCCEEEE-ETT-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSEE-EEEESSSCEEEEETTC
T ss_pred CceeEEEEcCCCCEEEE-eCC-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCE-EEEeCCCCeEEECCCC
Confidence 46888888888876654 444 688899877654322111 2356888888877764 4466656788899877
Q ss_pred CeeEEEee--------------cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe----------ecCce
Q 017314 162 GRVRHTLT--------------GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII----------FHSNC 217 (373)
Q Consensus 162 ~~~~~~~~--------------~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~----------~~~~~ 217 (373)
++...... -....|.++.... ...+..|..++-|..++...+....... ....+
T Consensus 288 ~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~--~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 288 NQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS--FNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp C---------CEEECBCSSTTSBSSSCEEEEEECS--SCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred CeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC--CCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 65432211 1235677776554 3457778888889999876553221110 12347
Q ss_pred eEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEe--cccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeee
Q 017314 218 NALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVA--AHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSL 295 (373)
Q Consensus 218 ~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~ 295 (373)
.++...++|.+ ..|+.++-|..||..++....-.. ......|.++..++++.+.+ ++.++-+..+|..+.+.. .+
T Consensus 366 ~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~ 442 (781)
T 3v9f_A 366 SSVCDDGQGKL-WIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-II 442 (781)
T ss_dssp EEEEECTTSCE-EEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-EC
T ss_pred EEEEEcCCCCE-EEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-Ee
Confidence 78888777764 456666668899987654321110 11225689999998888766 445556777877654322 22
Q ss_pred eecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccC-----CccEEEEEEcCCCCcEEEEeCCCe
Q 017314 296 RATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEH-----TAPVLSCSWSGLGKPLASADKNGV 368 (373)
Q Consensus 296 ~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h-----~~~V~~~~~s~~g~~l~s~s~dg~ 368 (373)
... ......+..++..++|.+.+ |+.. -|.+++..+++........ ...|.++...++|...+....+|.
T Consensus 443 ~~~-~~~~~~v~~i~~d~~g~lwi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl 517 (781)
T 3v9f_A 443 ELE-KNELLDVRVFYEDKNKKIWI-GTHA-GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGV 517 (781)
T ss_dssp CST-TTCCCCEEEEEECTTSEEEE-EETT-EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCE
T ss_pred ccC-CCCCCeEEEEEECCCCCEEE-EECC-ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCE
Confidence 110 00011222344566666444 5554 4889998876553332212 357899999998875554433453
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.55 E-value=8.5e-05 Score=68.29 Aligned_cols=237 Identities=12% Similarity=0.113 Sum_probs=135.5
Q ss_pred EEEEEEcCC--CCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCC-----cEEEEEcCCCe
Q 017314 91 CASILFEYN--SARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSN-----NLYVWDVNSGR 163 (373)
Q Consensus 91 v~~~~~~~~--~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~~~ 163 (373)
-..++++++ +..|+.+...+.|+.+|..++..... .........++++++++ |+.+...+ .+...+...+.
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~ 218 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGF 218 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTT
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCe
Confidence 457899984 44555555448999999987765443 33445678999999999 55444321 23333322211
Q ss_pred e-EEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEee-c--CceeEEEEccCCCEEEE-EeCCCcE
Q 017314 164 V-RHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF-H--SNCNALAFSMDGQTIFS-GHIDGNL 238 (373)
Q Consensus 164 ~-~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~-~--~~~~~~~~~~~g~~l~s-g~~dg~i 238 (373)
. ...+. .-.....+++.+..+.+.++-..++.|+.+|..++.....+.. . .....++++|+|++|+. -...+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 1 01111 1223345666664566666666778899999876654222221 1 12346999999996654 4556789
Q ss_pred EEEECC--CCee--eEEEecc--------------cccceEEEEE---------cCCCCEEEEeeCCCeEEEEEccccce
Q 017314 239 RLWDIQ--TGKL--LSEVAAH--------------SLAAVTSISL---------SRSGNIILTSGRDNLHNLFDIRSLEV 291 (373)
Q Consensus 239 ~iwd~~--~~~~--~~~~~~~--------------~~~~v~~~~~---------~~~~~~l~s~~~d~~i~~~d~~~~~~ 291 (373)
+.+|.. ++.. ...+.+. .......+++ +++++++++-...+.|+.++.. +.
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~-G~- 375 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE-GR- 375 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT-SE-
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC-CC-
Confidence 998865 3321 1222221 1123667899 7888888888888899988852 32
Q ss_pred eeeeeecCC--------e------eecCeeeeEEC-CCCcEEEEEeCCCcEEEEEc
Q 017314 292 CGSLRATGN--------R------VASNWSRSCIS-PDESYVAAGSADGSVYIWSI 332 (373)
Q Consensus 292 ~~~~~~~~~--------~------~~~~~~~~~~s-~~~~~l~sgs~Dg~i~iwd~ 332 (373)
+..+..... . ....-..++++ ++|.++++=....+|+.+++
T Consensus 376 v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 376 VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 222222111 0 00111235566 55666665556666766654
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.53 E-value=0.00051 Score=62.39 Aligned_cols=240 Identities=9% Similarity=0.031 Sum_probs=146.3
Q ss_pred CCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCCC----eeEEEeecCCCcEEEEEEee
Q 017314 108 QDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNSG----RVRHTLTGHTDKVCAVDVSK 182 (373)
Q Consensus 108 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~ 182 (373)
....|+..|+........+ .....+..++|++.+..|+.+. ..+.|+.+++... .....+.........+++.+
T Consensus 90 ~~~~I~~i~l~~~~~~~~~-~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~ 168 (400)
T 3p5b_L 90 NRHEVRKMTLDRSEYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 168 (400)
T ss_dssp ETTEEEEECTTSCSCEEEE-CSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEET
T ss_pred ccceeEEEccCCcceeEec-cccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEe
Confidence 3468888898766543333 3345678899998777776665 4578999988752 23333333445667888877
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCeeeeEEe-ecCceeEEEEccCCCEEEEEeC--CCcEEEEECCCCeeeEEEecccccc
Q 017314 183 ISSRHVVSAAYDRTLKVWDLHKGYCVNTII-FHSNCNALAFSMDGQTIFSGHI--DGNLRLWDIQTGKLLSEVAAHSLAA 259 (373)
Q Consensus 183 ~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~ 259 (373)
..+++.++-...+.|.+.++........+. .......+++.|.+..|+.... .+.|...++.... ...+.......
T Consensus 169 ~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~-~~~~~~~~l~~ 247 (400)
T 3p5b_L 169 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQW 247 (400)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCS-CEEEECSSCSC
T ss_pred cCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCc-cEEEEECCCCc
Confidence 666667777778899999987554322222 1234788999997666665442 3789988886533 23332223356
Q ss_pred eEEEEEcCCCCEEEEe-eCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEE
Q 017314 260 VTSISLSRSGNIILTS-GRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIV 338 (373)
Q Consensus 260 v~~~~~~~~~~~l~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~ 338 (373)
...|++++++..|..+ ...+.|..+|+..... ..+.........++ .+++ ..+.++.+-...+.|..++..+++.+
T Consensus 248 P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~-gl~v-~~~~lywtd~~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 248 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPF-SLAV-FEDKVFWTDIINEAIFSANRLTGSDV 324 (400)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEE-EEEE-ETTEEEEEESSSCSEEEEESSSCCCC
T ss_pred eEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCE-EEEE-eCCEEEEecCCCCeEEEEEcCCCCce
Confidence 7899999877765554 5567888888764322 22211111111111 1233 23456666677788999998787766
Q ss_pred EEeccCCccEEEEE
Q 017314 339 RTLKEHTAPVLSCS 352 (373)
Q Consensus 339 ~~l~~h~~~V~~~~ 352 (373)
..+........+++
T Consensus 325 ~~i~~~~~~p~~i~ 338 (400)
T 3p5b_L 325 NLLAENLLSPEDMV 338 (400)
T ss_dssp EEEECSCSCEEEEE
T ss_pred EEEecCCCCCceEE
Confidence 66654333344443
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.51 E-value=0.00021 Score=65.59 Aligned_cols=237 Identities=9% Similarity=0.046 Sum_probs=138.7
Q ss_pred ceEEEEEcCC--CCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCC---Cc-EEEEEccCC
Q 017314 132 SVLDLAITHD--NRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYD---RT-LKVWDLHKG 205 (373)
Q Consensus 132 ~v~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D---~~-i~vwd~~~~ 205 (373)
....++++|+ +..|+.+...+.|+.+|+.+++..... ........+++.+ +++++++.... .. +...+...+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~-~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKT-TNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEEC-CCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEee-cCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECCCC
Confidence 4568899985 556666655589999999888765443 3445578888887 45555554321 12 222332222
Q ss_pred ee-eeEEeecCceeEEEEcc-CCCEEEEEeCCCcEEEEECCCCeeeEEEe-cccccceEEEEEcCCCC-EEEEeeCCCeE
Q 017314 206 YC-VNTIIFHSNCNALAFSM-DGQTIFSGHIDGNLRLWDIQTGKLLSEVA-AHSLAAVTSISLSRSGN-IILTSGRDNLH 281 (373)
Q Consensus 206 ~~-~~~~~~~~~~~~~~~~~-~g~~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~~~v~~~~~~~~~~-~l~s~~~d~~i 281 (373)
.. ...+........++++| +|.+.++-..++.|+.+|..++.....+. ......-..++++|+++ ++++-...+.|
T Consensus 218 ~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 218 FTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp TCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 11 01222223467789999 67666666677889999998776533332 22112345699999999 45555567888
Q ss_pred EEEEccc--cce--eeeeeec-C-----Ce-----eecCeeeeEE---------CCCCcEEEEEeCCCcEEEEEccCceE
Q 017314 282 NLFDIRS--LEV--CGSLRAT-G-----NR-----VASNWSRSCI---------SPDESYVAAGSADGSVYIWSISKADI 337 (373)
Q Consensus 282 ~~~d~~~--~~~--~~~~~~~-~-----~~-----~~~~~~~~~~---------s~~~~~l~sgs~Dg~i~iwd~~~~~~ 337 (373)
..++... ... ...+... + .. ....-..+++ .++|.+.++-.....|+.++. ++..
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCCE
Confidence 8887642 111 1111111 0 00 0001123567 777888888777888999985 5544
Q ss_pred EEEeccC------------------CccEEEEEEc-CCCCcEEEEeCCCeEEEc
Q 017314 338 VRTLKEH------------------TAPVLSCSWS-GLGKPLASADKNGVVCVW 372 (373)
Q Consensus 338 ~~~l~~h------------------~~~V~~~~~s-~~g~~l~s~s~dg~i~iW 372 (373)
.... +. -..-..++++ ++|.++++=..++.|+..
T Consensus 377 ~t~~-G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i 429 (433)
T 4hw6_A 377 TTYA-GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKI 429 (433)
T ss_dssp EEEE-CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEE
T ss_pred EEEE-eCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEE
Confidence 3322 21 1125789999 566666665566777653
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.47 E-value=2.6e-05 Score=75.90 Aligned_cols=234 Identities=15% Similarity=0.101 Sum_probs=129.4
Q ss_pred ccCcEEEEEEcCCCCEEEEeeC-CCcEEEEeCCCCceeeecccccc-ceEEEEEcCCCCEEEEEe-CC-----CcEEEEE
Q 017314 87 HEGGCASILFEYNSARLISGGQ-DKSIKLWDTNTGSLSSTLYGCLG-SVLDLAITHDNRSVIAAS-SS-----NNLYVWD 158 (373)
Q Consensus 87 h~~~v~~~~~~~~~~~l~s~s~-D~~v~iwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~s~s-~d-----~~i~iwd 158 (373)
+...+.++++..++..++.||. +..+.+||..++.-...-..... .-.++++.++++.++.|+ .+ ..+.+||
T Consensus 241 ~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd 320 (656)
T 1k3i_A 241 HDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYS 320 (656)
T ss_dssp CCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEE
T ss_pred CCCccccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeC
Confidence 3344556778889999999994 56899999987653322111111 113445567899888888 44 5799999
Q ss_pred cCCCeeEEEeecCC-CcEEE---EEEeeCCCCEEEEEeCC---------CcEEEEEccCCeeeeEEeecC----------
Q 017314 159 VNSGRVRHTLTGHT-DKVCA---VDVSKISSRHVVSAAYD---------RTLKVWDLHKGYCVNTIIFHS---------- 215 (373)
Q Consensus 159 ~~~~~~~~~~~~h~-~~v~~---~~~~~~~~~~~~s~s~D---------~~i~vwd~~~~~~~~~~~~~~---------- 215 (373)
+.+++-... .... .+... ......+...++.|+.| ..+..||..+...........
T Consensus 321 ~~t~~W~~~-~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~ 399 (656)
T 1k3i_A 321 PSSKTWTSL-PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAM 399 (656)
T ss_dssp TTTTEEEEE-TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCB
T ss_pred CCCCcceeC-CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCC
Confidence 988753322 1000 00000 00000123334445444 456788887765332221111
Q ss_pred ceeEEEEc-cCCCEEEEEeCCC-----------cEEEEECCCCeeeEEE--ecccccceEEEEEcCCCCEEEEeeCC---
Q 017314 216 NCNALAFS-MDGQTIFSGHIDG-----------NLRLWDIQTGKLLSEV--AAHSLAAVTSISLSRSGNIILTSGRD--- 278 (373)
Q Consensus 216 ~~~~~~~~-~~g~~l~sg~~dg-----------~i~iwd~~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d--- 278 (373)
...++.+. .+++.++.|+.++ .|.+||..+....... .......-.+....|++++++.+|.+
T Consensus 400 ~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~ 479 (656)
T 1k3i_A 400 CGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGI 479 (656)
T ss_dssp TCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCC
T ss_pred CCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCc
Confidence 12344443 3677777887543 6888888776543322 11221123345667899999999865
Q ss_pred --------CeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeC
Q 017314 279 --------NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSA 323 (373)
Q Consensus 279 --------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~ 323 (373)
..+.+||..+.+....-.....+. ......+.|+|+.++.|+.
T Consensus 480 ~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~--~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 480 PFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRV--YHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp TTCCCSBCCCCEEEEGGGTEEEECCCCSSCCC--TTEEEEECTTSCEEEEECC
T ss_pred CcCCCCcccceEEEcCCCCceeecCCCCCccc--cccHhhcCCCcEEEecCCC
Confidence 457899987644321100111111 1122446789999999985
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.43 E-value=0.00029 Score=61.84 Aligned_cols=227 Identities=7% Similarity=0.059 Sum_probs=135.2
Q ss_pred CCcEEEEeCCCCce-eeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCee-EEEeecCCCcEEEEEEeeCCC
Q 017314 109 DKSIKLWDTNTGSL-SSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNSGRV-RHTLTGHTDKVCAVDVSKISS 185 (373)
Q Consensus 109 D~~v~iwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~ 185 (373)
...|+..|+..... ...+......+..++|.+.+..|+.+. ..+.|+.+++..+.. ...+.........+++.+..+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 46788899876531 111222234566889988766666554 567899999876632 122222223455677776566
Q ss_pred CEEEEEeCCCcEEEEEccCCeeeeEEe--ecCceeEEEEccCCCEEEEEe--CCCcEEEEECCCCeeeEEEecccccceE
Q 017314 186 RHVVSAAYDRTLKVWDLHKGYCVNTII--FHSNCNALAFSMDGQTIFSGH--IDGNLRLWDIQTGKLLSEVAAHSLAAVT 261 (373)
Q Consensus 186 ~~~~s~s~D~~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~sg~--~dg~i~iwd~~~~~~~~~~~~~~~~~v~ 261 (373)
+..++-...+.|.+.++..... ..+. .....+.+++.|.+..|+.+. ..+.|...++... ....+........+
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~-~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~~~l~~Pn 169 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFIIINSEIYWPN 169 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSC-EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEEEECSSCSCEE
T ss_pred eEEEEECCCCEEEEEECCCCcE-EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEEEEECCCCCcc
Confidence 6667777788999999865432 2222 123478899999766666554 2578888887643 23333222235678
Q ss_pred EEEEcCCCCEE-EEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEE
Q 017314 262 SISLSRSGNII-LTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRT 340 (373)
Q Consensus 262 ~~~~~~~~~~l-~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~ 340 (373)
.+++++++..| ++-+..+.|..+|+..... ..+.. .....+. .+++. .+.++.+-...+.|..++..+++....
T Consensus 170 glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~--~~~~~P~-glav~-~~~lywtd~~~~~V~~~~~~~G~~~~~ 244 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVK--GSLPHPF-ALTLF-EDILYWTDWSTHSILACNKYTGEGLRE 244 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEC--SCCSCEE-EEEEE-TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred EEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEec--CCCCCce-EEEEe-CCEEEEEecCCCeEEEEECCCCCceEE
Confidence 99999866655 4555677888888764221 11111 0111111 13343 345556666778899999877765554
Q ss_pred ec
Q 017314 341 LK 342 (373)
Q Consensus 341 l~ 342 (373)
+.
T Consensus 245 i~ 246 (318)
T 3sov_A 245 IH 246 (318)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.43 E-value=3.4e-05 Score=76.26 Aligned_cols=194 Identities=9% Similarity=0.013 Sum_probs=107.8
Q ss_pred ccC-cEEEEEEc-CCCCEEEEeeC-----CCcEEEEeCCCC-ceee-eccccccceEEEEEcCCCCEEEEEeCC-----C
Q 017314 87 HEG-GCASILFE-YNSARLISGGQ-----DKSIKLWDTNTG-SLSS-TLYGCLGSVLDLAITHDNRSVIAASSS-----N 152 (373)
Q Consensus 87 h~~-~v~~~~~~-~~~~~l~s~s~-----D~~v~iwd~~~~-~~~~-~~~~~~~~v~~~~~~~~~~~l~s~s~d-----~ 152 (373)
|.. .+....|| |||++||-+.. ..+|+++|+.++ +.+. .+. ....+++|+||++.|+....| .
T Consensus 171 ~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 171 KAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLREN 247 (751)
T ss_dssp CSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEE
T ss_pred CCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCC
Confidence 443 67889999 99998874332 235999999988 6321 111 123467899999988877765 3
Q ss_pred cEEEEEcCCCee--EEEee-cCCCcEEEEEEeeCCCCEEEEEe-C--CCcEEEEEccCCe-ee--eEEeec-C-ceeEEE
Q 017314 153 NLYVWDVNSGRV--RHTLT-GHTDKVCAVDVSKISSRHVVSAA-Y--DRTLKVWDLHKGY-CV--NTIIFH-S-NCNALA 221 (373)
Q Consensus 153 ~i~iwd~~~~~~--~~~~~-~h~~~v~~~~~~~~~~~~~~s~s-~--D~~i~vwd~~~~~-~~--~~~~~~-~-~~~~~~ 221 (373)
.|+++++.+++. ...+. ........+.+++ ++++|+..+ . ...|.++|+.++. .. ..+... . ...++.
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~ 326 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQ 326 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEe
Confidence 588888877642 23333 2223456677887 566665433 2 3457788887652 11 222111 1 122333
Q ss_pred EccCCCEEE-EEeCC--C--cEEEEECCCCeeeEE-Eeccc-ccceEEEEEcCCCCEEEEeeCCCeEE--EEEc
Q 017314 222 FSMDGQTIF-SGHID--G--NLRLWDIQTGKLLSE-VAAHS-LAAVTSISLSRSGNIILTSGRDNLHN--LFDI 286 (373)
Q Consensus 222 ~~~~g~~l~-sg~~d--g--~i~iwd~~~~~~~~~-~~~~~-~~~v~~~~~~~~~~~l~s~~~d~~i~--~~d~ 286 (373)
|+. |..|+ ....+ + .|..+|+.++..... +..+. ...+..+.+. .+.++++...++..+ ++|+
T Consensus 327 ~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 327 MHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred eee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 333 55554 44443 2 566677764222222 22222 1245556655 234556666677544 4554
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.41 E-value=0.00067 Score=59.47 Aligned_cols=205 Identities=12% Similarity=0.023 Sum_probs=125.3
Q ss_pred cCcEEEEEEcCCCCEE-EEeeCCCcEEEEeCCC----CceeeeccccccceEEEEEcCCCCEEEEE-eCCCcEEEEEcCC
Q 017314 88 EGGCASILFEYNSARL-ISGGQDKSIKLWDTNT----GSLSSTLYGCLGSVLDLAITHDNRSVIAA-SSSNNLYVWDVNS 161 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~ 161 (373)
.....++.|++.++.| ++-...+.|..+++.. ......+.........+++.+.+..|+.+ ...+.|.+.|+..
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g 108 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 108 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCC
Confidence 3456789999876555 4555678999999876 22222222223456788998766655544 5678999999876
Q ss_pred CeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCC-CcEEEEEccCCeeeeEEee--cCceeEEEEccCCCEEEEEe-CCCc
Q 017314 162 GRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYD-RTLKVWDLHKGYCVNTIIF--HSNCNALAFSMDGQTIFSGH-IDGN 237 (373)
Q Consensus 162 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D-~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~sg~-~dg~ 237 (373)
......+...-.....+++.|..+..+++.... +.|...++.... ...+.. -...+.++++|++..|+.+. ..+.
T Consensus 109 ~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~ 187 (316)
T 1ijq_A 109 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 187 (316)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceEEEEeccCCEEEEEECCCCe
Confidence 544333333345667888887555555554433 678888875332 222211 13478999999877776554 5678
Q ss_pred EEEEECCCCeeeEEEec--ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeee
Q 017314 238 LRLWDIQTGKLLSEVAA--HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSL 295 (373)
Q Consensus 238 i~iwd~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~ 295 (373)
|..+|+.... ...+.. ........+++. .+.++++....+.|..++..+++....+
T Consensus 188 I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 188 ISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 245 (316)
T ss_dssp EEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEE
Confidence 9999987432 233321 112345677775 3566667767788888887655544333
No 279
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.39 E-value=0.0004 Score=58.58 Aligned_cols=202 Identities=9% Similarity=0.117 Sum_probs=125.5
Q ss_pred EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec--CceeEEEEccCCCEEEEEeCCCcEEEEECC
Q 017314 167 TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH--SNCNALAFSMDGQTIFSGHIDGNLRLWDIQ 244 (373)
Q Consensus 167 ~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~ 244 (373)
.+.+-.+.+..+++.|..+.+++....++.|...|.. +...+.+... .....+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 4455567799999998555455557778889999987 7777777544 467889999999877776677889999876
Q ss_pred CCee---eEEEec-----ccccceEEEEEcCCCCEEEEeeCCCeEEEEEcccc---ceeeeeee---cCCeeecCeeeeE
Q 017314 245 TGKL---LSEVAA-----HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSL---EVCGSLRA---TGNRVASNWSRSC 310 (373)
Q Consensus 245 ~~~~---~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~---~~~~~~~~---~~~~~~~~~~~~~ 310 (373)
.... +..... ........++++|.++.|.++.......+|.+... .....+.. .........+.++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 5432 222221 12234689999999977666655544555555410 00111100 0000112345567
Q ss_pred ECCC-CcEEEEEeCCCcEEEEEccCceEEEEe--c-cCC------ccEEEEEEcCCCCcEEEEeCCCeEEE
Q 017314 311 ISPD-ESYVAAGSADGSVYIWSISKADIVRTL--K-EHT------APVLSCSWSGLGKPLASADKNGVVCV 371 (373)
Q Consensus 311 ~s~~-~~~l~sgs~Dg~i~iwd~~~~~~~~~l--~-~h~------~~V~~~~~s~~g~~l~s~s~dg~i~i 371 (373)
++|. +.+++.......|.++|.. ++++..+ . +.. ..-..++|.|+|+..++ +.-..+.+
T Consensus 180 ~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~ 248 (255)
T 3qqz_A 180 FNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYR 248 (255)
T ss_dssp EETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEE
T ss_pred EcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEE
Confidence 7774 5666667777889999866 4455443 2 211 24589999999974444 55554444
No 280
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.36 E-value=0.00057 Score=60.87 Aligned_cols=200 Identities=11% Similarity=0.031 Sum_probs=125.5
Q ss_pred CcEEEEEEcCCCCEEE-EeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCeeEE
Q 017314 89 GGCASILFEYNSARLI-SGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAA-SSSNNLYVWDVNSGRVRH 166 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~~~~ 166 (373)
....+++|++.+..|+ +-...+.|..+++..+.....+.........+++.+.+..|+.+ ...+.|.+.+++......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 3467899997666554 44567889999988665433333333455778998866666554 456789999987654333
Q ss_pred EeecCCCcEEEEEEeeCCCCEEEEEeCC-CcEEEEEccCCeeeeEEe--ecCceeEEEEccCCCEEEEE-eCCCcEEEEE
Q 017314 167 TLTGHTDKVCAVDVSKISSRHVVSAAYD-RTLKVWDLHKGYCVNTII--FHSNCNALAFSMDGQTIFSG-HIDGNLRLWD 242 (373)
Q Consensus 167 ~~~~h~~~v~~~~~~~~~~~~~~s~s~D-~~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~sg-~~dg~i~iwd 242 (373)
.+...-.....+++.|..+..+++-... +.|...++..... ..+. .-...+.++++|++..|+.+ +..+.|..+|
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~ 231 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR-RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERAN 231 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCc-EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEe
Confidence 3433445668888887656555665555 7888888764322 1111 11236899999977777655 4567899999
Q ss_pred CCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce
Q 017314 243 IQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV 291 (373)
Q Consensus 243 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~ 291 (373)
+..... ..+..........+++. .+.++.+....+.|..++..+++.
T Consensus 232 ~dG~~~-~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 232 LDGSHR-KAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKN 278 (349)
T ss_dssp TTSCSC-EEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCS
T ss_pred CCCCce-EEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCc
Confidence 865332 22222223456777773 455666666677777777544443
No 281
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.36 E-value=0.00036 Score=64.63 Aligned_cols=247 Identities=12% Similarity=0.097 Sum_probs=143.8
Q ss_pred EEEEEEcC-CCCEEEEee-CCCcEEEEeCCCCceeeeccc---cccceEEEEE-------cCCCCEEEEEeCCC------
Q 017314 91 CASILFEY-NSARLISGG-QDKSIKLWDTNTGSLSSTLYG---CLGSVLDLAI-------THDNRSVIAASSSN------ 152 (373)
Q Consensus 91 v~~~~~~~-~~~~l~s~s-~D~~v~iwd~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~l~s~s~d~------ 152 (373)
-..|+|+| ++..|+.+. ..+.|++.|.+++.+...... .......++| +++++.|+.+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 46789998 355555544 447799999988766543322 1235788999 99999777766554
Q ss_pred -cEEEEEcCC-CeeE-----EEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEcc-------CCee-----------
Q 017314 153 -NLYVWDVNS-GRVR-----HTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLH-------KGYC----------- 207 (373)
Q Consensus 153 -~i~iwd~~~-~~~~-----~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~-------~~~~----------- 207 (373)
.|.+.+... +... ..+... .....++++|..+.++++-..++.|..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccc
Confidence 266665443 2221 122211 1234566777666677777788899999987 4442
Q ss_pred eeEE-eec--CceeEEEEccCCCEEEEE-eCCCcEEEEEC--CCCee--eEEEecc--------------cccceE-EEE
Q 017314 208 VNTI-IFH--SNCNALAFSMDGQTIFSG-HIDGNLRLWDI--QTGKL--LSEVAAH--------------SLAAVT-SIS 264 (373)
Q Consensus 208 ~~~~-~~~--~~~~~~~~~~~g~~l~sg-~~dg~i~iwd~--~~~~~--~~~~~~~--------------~~~~v~-~~~ 264 (373)
...+ ... .....++|+|+|++|+.+ +..+.|+.+|. .++.. ...+.+. ...... .+.
T Consensus 300 ~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~ 379 (496)
T 3kya_A 300 FKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVF 379 (496)
T ss_dssp EEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEE
T ss_pred cceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEE
Confidence 1122 121 235789999999965544 56678888654 33322 1222221 011234 455
Q ss_pred Ec-------CCCCEEEEeeCCCeEEEEEccccceeeeeeecCC--------------e------eecCeeeeEECCC-Cc
Q 017314 265 LS-------RSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGN--------------R------VASNWSRSCISPD-ES 316 (373)
Q Consensus 265 ~~-------~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~--------------~------~~~~~~~~~~s~~-~~ 316 (373)
.+ +++.++++-..+..|+.++. .+ .+.++.+.+. . ....-..++++++ |.
T Consensus 380 vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~ 457 (496)
T 3kya_A 380 VKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM 457 (496)
T ss_dssp EECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE
T ss_pred EccccccccCCCeEEEEECCCCEEEEEeC-CC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE
Confidence 54 56777788788889999984 33 3334433211 1 0011223567776 77
Q ss_pred EEEEEeCCCcEEEEEccCceEEEE
Q 017314 317 YVAAGSADGSVYIWSISKADIVRT 340 (373)
Q Consensus 317 ~l~sgs~Dg~i~iwd~~~~~~~~~ 340 (373)
++++=+...+||.+++.....++.
T Consensus 458 lyVaD~~N~rIrki~~~~~~~~~~ 481 (496)
T 3kya_A 458 FYVHDQVGHTIRTISMEQEENVAG 481 (496)
T ss_dssp EEEEETTTTEEEEEEECCCC----
T ss_pred EEEEeCCCCEEEEEECCCCccccc
Confidence 777667777888888776555443
No 282
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.36 E-value=0.0011 Score=58.31 Aligned_cols=271 Identities=8% Similarity=0.024 Sum_probs=137.7
Q ss_pred cCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeec----cccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCe
Q 017314 88 EGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTL----YGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR 163 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 163 (373)
...+.++.|..++..++ ++.++.|. .....++.-... ......+.++.|.+ + .++.++..+.|.. ..+.|+
T Consensus 35 ~~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SSCEEEEEESSSSCEEE-EETTTEEE-EESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETTEEEE-ESSTTS
T ss_pred CCcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCCeEEE-ECCCCC
Confidence 34688999987777777 56677653 333333221111 11234678888875 3 4444555665543 222233
Q ss_pred eEEEee---cCCCcEEEEEEeeCCCCEEEEEeCCCcE-EEEEccCCeeeeEE--eecCceeEEEEccCCCEEEEEeCCCc
Q 017314 164 VRHTLT---GHTDKVCAVDVSKISSRHVVSAAYDRTL-KVWDLHKGYCVNTI--IFHSNCNALAFSMDGQTIFSGHIDGN 237 (373)
Q Consensus 164 ~~~~~~---~h~~~v~~~~~~~~~~~~~~s~s~D~~i-~vwd~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~sg~~dg~ 237 (373)
.-..+. .+...+..+.+.+ .+. ++.++.++.| +-.|- |..-... .....+..+.+.|++.+++.+...+.
T Consensus 110 tW~~~~~~~~~~~~~~~i~~~~-~~~-~~~~~~~g~v~~S~Dg--G~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~ 185 (327)
T 2xbg_A 110 SWSQIPLDPKLPGSPRLIKALG-NGS-AEMITNVGAIYRTKDS--GKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSF 185 (327)
T ss_dssp SCEECCCCTTCSSCEEEEEEEE-TTE-EEEEETTCCEEEESST--TSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSE
T ss_pred CceECccccCCCCCeEEEEEEC-CCC-EEEEeCCccEEEEcCC--CCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcE
Confidence 211111 2334466666554 333 4444456654 33331 2111111 11234678889999888776654443
Q ss_pred EEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcE
Q 017314 238 LRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESY 317 (373)
Q Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ 317 (373)
.+-+|- .+..-..+.......+..+.+++++.+++. +.++.+.+.+...++.-..+..........+..+.+.+++..
T Consensus 186 ~~S~d~-gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~ 263 (327)
T 2xbg_A 186 YSTWEP-GQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEV 263 (327)
T ss_dssp EEEECT-TCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCE
T ss_pred EEEeCC-CCCceeECCCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEE
Confidence 444442 122222222222356888999999876654 456766665321111111111110000112334556777777
Q ss_pred EEEEeCCCcEEEEEccCceEEEEec---cCCccEEEEEEcCCCCcEEEEeCCCeEEEc
Q 017314 318 VAAGSADGSVYIWSISKADIVRTLK---EHTAPVLSCSWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 318 l~sgs~Dg~i~iwd~~~~~~~~~l~---~h~~~V~~~~~s~~g~~l~s~s~dg~i~iW 372 (373)
+++|. +|.| ++....++--..+. .+...+.++.|.+++ .++.++.+|.|.-+
T Consensus 264 ~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 264 WLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRY 318 (327)
T ss_dssp EEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEE
T ss_pred EEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEE
Confidence 77665 6766 34555454333333 234567889997554 46677788887654
No 283
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.36 E-value=0.00025 Score=62.22 Aligned_cols=194 Identities=15% Similarity=0.292 Sum_probs=122.4
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeC---CCC---E-EEEEeC--CCcEEEEEcc--CCeeee
Q 017314 141 DNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKI---SSR---H-VVSAAY--DRTLKVWDLH--KGYCVN 209 (373)
Q Consensus 141 ~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~~---~-~~s~s~--D~~i~vwd~~--~~~~~~ 209 (373)
...+++.....+-+.+||+ +|+.+..+.. ..+..+++-+. .+. + ++|.-. +++|++|++. ++. +.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~ 114 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQ 114 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-ee
Confidence 3456777777889999999 7888887764 45666665541 111 2 234444 6899999773 332 33
Q ss_pred EEe-----ec---CceeEEEE--ccC-CC-EEEEEeCCCcEEEEEC-------CCCeeeEEEecccccceEEEEEcCCCC
Q 017314 210 TII-----FH---SNCNALAF--SMD-GQ-TIFSGHIDGNLRLWDI-------QTGKLLSEVAAHSLAAVTSISLSRSGN 270 (373)
Q Consensus 210 ~~~-----~~---~~~~~~~~--~~~-g~-~l~sg~~dg~i~iwd~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~ 270 (373)
.+. .. ..+..+|+ +|. +. +++....+|.+..|++ .+.+.++++... ..+-.|..++...
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg--sq~EgcvvDd~~g 192 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN--SQTEGMAADDEYG 192 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS--SCEEEEEEETTTT
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC--CCcceEEEcCCCC
Confidence 331 11 33555777 774 44 6888888999999988 234566776655 4688899999999
Q ss_pred EEEEeeCCCeEEEEEccc-----cceeeeeeecCCeeecCeeeeEE--CCCCc-EEEEEe-CCCcEEEEEcc-CceEEEE
Q 017314 271 IILTSGRDNLHNLFDIRS-----LEVCGSLRATGNRVASNWSRSCI--SPDES-YVAAGS-ADGSVYIWSIS-KADIVRT 340 (373)
Q Consensus 271 ~l~s~~~d~~i~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~--s~~~~-~l~sgs-~Dg~i~iwd~~-~~~~~~~ 340 (373)
.|+.+-.+.-|..++... .+.+..+. .........-+++ .++++ ||++.+ .+.+..+||.. +.+.+..
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~--~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~ 270 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD--GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVAD 270 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBS--SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEE
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEec--CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEE
Confidence 999999987766666442 22332221 1222222233444 45555 555555 67799999996 6677776
Q ss_pred ec
Q 017314 341 LK 342 (373)
Q Consensus 341 l~ 342 (373)
|.
T Consensus 271 f~ 272 (355)
T 3amr_A 271 FR 272 (355)
T ss_dssp EE
T ss_pred EE
Confidence 63
No 284
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.35 E-value=0.00035 Score=63.18 Aligned_cols=204 Identities=10% Similarity=-0.007 Sum_probs=126.5
Q ss_pred CcEEEEEEcCCCCEE-EEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEE-eCCCcEEEEEcCCCeeEE
Q 017314 89 GGCASILFEYNSARL-ISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAA-SSSNNLYVWDVNSGRVRH 166 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~~~~~ 166 (373)
....+++|++.+..| ++-...+.|..+++..+.....+.........+++.+.+..|+.+ ...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 456789999765555 454567889999988765433333333445678898876666554 456788888887554333
Q ss_pred EeecCCCcEEEEEEeeCCCCEEEEEeCC-CcEEEEEccCCeeeeEEee-cCceeEEEEccCCCEEEEE-eCCCcEEEEEC
Q 017314 167 TLTGHTDKVCAVDVSKISSRHVVSAAYD-RTLKVWDLHKGYCVNTIIF-HSNCNALAFSMDGQTIFSG-HIDGNLRLWDI 243 (373)
Q Consensus 167 ~~~~h~~~v~~~~~~~~~~~~~~s~s~D-~~i~vwd~~~~~~~~~~~~-~~~~~~~~~~~~g~~l~sg-~~dg~i~iwd~ 243 (373)
.+.........+++.|..+..+++-... +.|...++........... -...+.++++|++..|+.+ +..+.|..+|+
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~ 275 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 275 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECT
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 3443445668888887555555565555 7788888764322211111 1236899999877777654 45678999998
Q ss_pred CCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeee
Q 017314 244 QTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGS 294 (373)
Q Consensus 244 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~ 294 (373)
..... ..+..........+++. .+.++.+....+.|..++..+++....
T Consensus 276 dG~~~-~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~ 324 (386)
T 3v65_B 276 DGSHR-KAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEI 324 (386)
T ss_dssp TSCSC-EEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred CCCee-EEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEE
Confidence 65332 23322223456777773 455666666777888887555444333
No 285
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.33 E-value=0.00097 Score=56.20 Aligned_cols=199 Identities=16% Similarity=0.205 Sum_probs=124.0
Q ss_pred EecCccCcEEEEEEcCCCCEEEE-eeCCCcEEEEeCCCCceeeecc-ccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC
Q 017314 83 KINAHEGGCASILFEYNSARLIS-GGQDKSIKLWDTNTGSLSSTLY-GCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN 160 (373)
Q Consensus 83 ~~~~h~~~v~~~~~~~~~~~l~s-~s~D~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~ 160 (373)
.+.+-.+.++.++++|+++.|++ ...++.|...|.. ++....+. +.....-.+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 45555678999999998776665 5678889999987 77766653 222456678888888877776677889999876
Q ss_pred CCee---EEEee------cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEcc---CCeeeeEEe--------ecCceeEE
Q 017314 161 SGRV---RHTLT------GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLH---KGYCVNTII--------FHSNCNAL 220 (373)
Q Consensus 161 ~~~~---~~~~~------~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~---~~~~~~~~~--------~~~~~~~~ 220 (373)
.... ..... ........+++.+... .++++.......+|.+. ....+.... .-....++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~-~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDH-TFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTT-EEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCC-EEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 5432 22221 1233457899988544 45545444444555543 111111111 11246789
Q ss_pred EEccCCCE-EEEEeCCCcEEEEECCCCeeeEEEeccc--------ccceEEEEEcCCCCEEEEeeCCCeEEEEE
Q 017314 221 AFSMDGQT-IFSGHIDGNLRLWDIQTGKLLSEVAAHS--------LAAVTSISLSRSGNIILTSGRDNLHNLFD 285 (373)
Q Consensus 221 ~~~~~g~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~--------~~~v~~~~~~~~~~~l~s~~~d~~i~~~d 285 (373)
+++|.... ++....++.+-.+|.. ++.+..+.... ...--.|+|+++|++.++ +..+.+..|.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 99996544 4556667778888875 44555443321 135678999999986666 5666555543
No 286
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.32 E-value=0.00062 Score=63.02 Aligned_cols=238 Identities=11% Similarity=0.087 Sum_probs=137.5
Q ss_pred ceEEEEEcC-CCCEEEEEeC-CCcEEEEEcCCCeeEEEeecC---CCcEEEEEE-------eeCCCCEEEEEeCCC----
Q 017314 132 SVLDLAITH-DNRSVIAASS-SNNLYVWDVNSGRVRHTLTGH---TDKVCAVDV-------SKISSRHVVSAAYDR---- 195 (373)
Q Consensus 132 ~v~~~~~~~-~~~~l~s~s~-d~~i~iwd~~~~~~~~~~~~h---~~~v~~~~~-------~~~~~~~~~s~s~D~---- 195 (373)
....++|+| ++..|+.+.. .+.|++.|+.++.+...+..- ......++| .+ +++.++.+...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~-~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYAD-EAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBC-TTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCC-CCCEEEEEeCCCCCcc
Confidence 356789998 3555555554 467999999888766544432 234778888 77 455555554443
Q ss_pred ---cEEEEEccC-Ceee-----eEEeecCceeEEEEccC-CCEEEEEeCCCcEEEEECC-------CCee----------
Q 017314 196 ---TLKVWDLHK-GYCV-----NTIIFHSNCNALAFSMD-GQTIFSGHIDGNLRLWDIQ-------TGKL---------- 248 (373)
Q Consensus 196 ---~i~vwd~~~-~~~~-----~~~~~~~~~~~~~~~~~-g~~l~sg~~dg~i~iwd~~-------~~~~---------- 248 (373)
.|.+.+... +... ..+.....+..++++|+ +.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 255565333 1221 22333345678899995 5555566678889999987 5543
Q ss_pred -eEE-EecccccceEEEEEcCCCCE-EEEeeCCCeEEEEEccc--ccee--eeeeec----C--------CeeecCeeee
Q 017314 249 -LSE-VAAHSLAAVTSISLSRSGNI-ILTSGRDNLHNLFDIRS--LEVC--GSLRAT----G--------NRVASNWSRS 309 (373)
Q Consensus 249 -~~~-~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~~~d~~~--~~~~--~~~~~~----~--------~~~~~~~~~~ 309 (373)
... +..........|+|+|+|++ +++-.....|+.++... .... ..+.+. + .....+...+
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv 378 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGV 378 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEE
Confidence 112 22222245678999999995 55556677888866432 2110 111111 0 0111122123
Q ss_pred EEC-------CCCcEEEEEeCCCcEEEEEccCceEEEEeccC------------------------CccEEEEEEcCC-C
Q 017314 310 CIS-------PDESYVAAGSADGSVYIWSISKADIVRTLKEH------------------------TAPVLSCSWSGL-G 357 (373)
Q Consensus 310 ~~s-------~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h------------------------~~~V~~~~~s~~-g 357 (373)
++. ++|.++++=+...+|+.++ .++. +.++-+. -..-..++++++ |
T Consensus 379 ~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g 456 (496)
T 3kya_A 379 FVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKE 456 (496)
T ss_dssp EEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTT
T ss_pred EEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCC
Confidence 444 4667777777788999998 4554 3333221 012478999997 6
Q ss_pred CcEEEEeCCCeEEEc
Q 017314 358 KPLASADKNGVVCVW 372 (373)
Q Consensus 358 ~~l~s~s~dg~i~iW 372 (373)
.++++=..+..||.+
T Consensus 457 ~lyVaD~~N~rIrki 471 (496)
T 3kya_A 457 MFYVHDQVGHTIRTI 471 (496)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEEeCCCCEEEEE
Confidence 655555556777754
No 287
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.29 E-value=0.0016 Score=64.30 Aligned_cols=229 Identities=9% Similarity=0.054 Sum_probs=137.2
Q ss_pred CCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCCC----eeEEEeecCCCcEEEEEEee
Q 017314 108 QDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNSG----RVRHTLTGHTDKVCAVDVSK 182 (373)
Q Consensus 108 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~----~~~~~~~~h~~~v~~~~~~~ 182 (373)
....|+..++........+. ....+..++|.+.+..|+.+. ..+.|+.+++... .....+.........+++.+
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~-~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~ 480 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 480 (791)
T ss_dssp CBSSEEEECTTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEET
T ss_pred cccceeEeeccCCcceeeec-CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeee
Confidence 34568888877654433332 345677899998766666554 4568988888753 22333333445566788887
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCeeeeEEee-c-CceeEEEEccCCCEEEEEeC--CCcEEEEECCCCeeeEEEeccccc
Q 017314 183 ISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF-H-SNCNALAFSMDGQTIFSGHI--DGNLRLWDIQTGKLLSEVAAHSLA 258 (373)
Q Consensus 183 ~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~-~-~~~~~~~~~~~g~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~ 258 (373)
...+++++-...+.|.+.++..... ..+.. . .....|++.|.+.+|+.... .+.|...++.... ...+......
T Consensus 481 ~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~-~~~lv~~~l~ 558 (791)
T 3m0c_C 481 IHSNIYWTDSVLGTVSVADTKGVKR-KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQ 558 (791)
T ss_dssp TTTEEEEEETTTTEEEEEETTSSSE-EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCS
T ss_pred cCCcEEEEecCCCeEEEEeCCCCeE-EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc-eEEEEeCCCC
Confidence 6666777778889999999875443 23322 2 34789999998666665543 2679888886543 3334333345
Q ss_pred ceEEEEEcCCCCEEEEe-eCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceE
Q 017314 259 AVTSISLSRSGNIILTS-GRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADI 337 (373)
Q Consensus 259 ~v~~~~~~~~~~~l~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~ 337 (373)
....|++++.+..|+.+ ...+.|..+++...... .+.........++ .+++. .+.++++-...+.|...+..+++.
T Consensus 559 ~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~-~v~~~~~~l~~P~-glav~-~~~lYwtD~~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 559 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK-TILEDEKRLAHPF-SLAVF-EDKVFWTDIINEAIFSANRLTGSD 635 (791)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EEEECTTTTSSEE-EEEEE-TTEEEEEETTTTEEEEEETTTCCC
T ss_pred CceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE-EEecCCCccCCCC-EEEEe-CCEEEEEECCCCEEEEEeCCCCcc
Confidence 78899999776655544 45678888887543322 2211111111111 12232 234555556677888888777766
Q ss_pred EEEec
Q 017314 338 VRTLK 342 (373)
Q Consensus 338 ~~~l~ 342 (373)
+..+.
T Consensus 636 ~~~l~ 640 (791)
T 3m0c_C 636 VNLLA 640 (791)
T ss_dssp CEEEE
T ss_pred eEEee
Confidence 55553
No 288
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.29 E-value=0.0016 Score=59.04 Aligned_cols=208 Identities=11% Similarity=-0.001 Sum_probs=127.0
Q ss_pred ccCcEEEEEEcCCCCEEEEe-eCCCcEEEEeCCCC----ceeeeccccccceEEEEEcCCCCEEEEE-eCCCcEEEEEcC
Q 017314 87 HEGGCASILFEYNSARLISG-GQDKSIKLWDTNTG----SLSSTLYGCLGSVLDLAITHDNRSVIAA-SSSNNLYVWDVN 160 (373)
Q Consensus 87 h~~~v~~~~~~~~~~~l~s~-s~D~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~ 160 (373)
....+.+++|++.+..|+-+ ...+.|+.+++... .....+.........+++.+.++.|+.+ ...+.|.+.+++
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCC
Confidence 34567899999866655444 45788999998652 2222233234567789999866655554 456789999987
Q ss_pred CCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeC-CCcEEEEEccCCeeeeEEeec-CceeEEEEccCCCEEEEEe-CCCc
Q 017314 161 SGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAY-DRTLKVWDLHKGYCVNTIIFH-SNCNALAFSMDGQTIFSGH-IDGN 237 (373)
Q Consensus 161 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~-D~~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~sg~-~dg~ 237 (373)
.......+...-.....+++.|..+.++++-.. .+.|...++............ ...+.++++|++..|+.+. ..+.
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~ 269 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHS 269 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCE
Confidence 665444444444557888888755555555433 367888887643322211111 3478999999888777654 4678
Q ss_pred EEEEECCCCeeeEEEec-ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeee
Q 017314 238 LRLWDIQTGKLLSEVAA-HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSL 295 (373)
Q Consensus 238 i~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~ 295 (373)
|..+|+........+.. ........+++. .+.++.+....+.|..+|..+++....+
T Consensus 270 I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 270 ISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp EEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred EEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 99999865433222222 112345567773 3455666666777888886665544443
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.24 E-value=0.00092 Score=58.14 Aligned_cols=195 Identities=8% Similarity=0.122 Sum_probs=118.9
Q ss_pred EEEEcCCCCEEEEee-CCCcEEEEeCCCCceeee-ccc----cc--cceEEEEE---cCCCCEEEEEe------------
Q 017314 93 SILFEYNSARLISGG-QDKSIKLWDTNTGSLSST-LYG----CL--GSVLDLAI---THDNRSVIAAS------------ 149 (373)
Q Consensus 93 ~~~~~~~~~~l~s~s-~D~~v~iwd~~~~~~~~~-~~~----~~--~~v~~~~~---~~~~~~l~s~s------------ 149 (373)
+..|+.....|..++ ..++|..||...+..... +.+ .. ..+..+.+ .|+++++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 467877556666556 789999999976644332 222 11 13578899 68876666543
Q ss_pred -CCCcEEEEEcC---CCeeEEEee--cCC-----------CcEEEEEEeeCCCCEEEEEeCC-CcEEEEEccCCeeeeEE
Q 017314 150 -SSNNLYVWDVN---SGRVRHTLT--GHT-----------DKVCAVDVSKISSRHVVSAAYD-RTLKVWDLHKGYCVNTI 211 (373)
Q Consensus 150 -~d~~i~iwd~~---~~~~~~~~~--~h~-----------~~v~~~~~~~~~~~~~~s~s~D-~~i~vwd~~~~~~~~~~ 211 (373)
.+..+..||+. +++.+.... ... .....+++.+ .++..++++.- +.|...+..... +..+
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~~-~~~~ 174 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGKT-VSTF 174 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSCC-EEEE
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCCE-Eeee
Confidence 26779999999 777654432 211 1356777766 67788888877 776666654332 2211
Q ss_pred ee-c------CceeEEEEccCCCEEEEEeCCCcEEEEECCCCee--eEEEe--cc--cccceEE-EEEcCCCCE-EEEee
Q 017314 212 IF-H------SNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKL--LSEVA--AH--SLAAVTS-ISLSRSGNI-ILTSG 276 (373)
Q Consensus 212 ~~-~------~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~--~~~~~--~~--~~~~v~~-~~~~~~~~~-l~s~~ 276 (373)
.. . ...+.++++|+|..|++...+|.+..+|+..... +. .. +. ....... +..-.+|+. |++.+
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~vllV~~~ 253 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNESVLVGAR 253 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTEEEEEEEE
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeec-ccccCCcccccCcccccccccCCEEEEEEcC
Confidence 11 1 1256899999999998887799999999885322 11 11 11 1112333 333456776 55555
Q ss_pred CCCeEEEEEccccc
Q 017314 277 RDNLHNLFDIRSLE 290 (373)
Q Consensus 277 ~d~~i~~~d~~~~~ 290 (373)
..+.+.+.+...++
T Consensus 254 ~~~~~~l~S~DgW~ 267 (334)
T 2p9w_A 254 APYAISFRSWDNWK 267 (334)
T ss_dssp TTEEEEEECSSTTS
T ss_pred CCCEEEEECCCCcc
Confidence 66666666654433
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.14 E-value=2.1e-05 Score=76.84 Aligned_cols=240 Identities=10% Similarity=0.054 Sum_probs=137.8
Q ss_pred CCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCC----CeeEEEeecCCCcEEEEEEee
Q 017314 108 QDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNS----GRVRHTLTGHTDKVCAVDVSK 182 (373)
Q Consensus 108 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~----~~~~~~~~~h~~~v~~~~~~~ 182 (373)
....|+..++.+......+.. ...+..++|.+.+..|+.+. ..+.|+.+++.+ ......+.........+++.+
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~-~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCC-CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred CccceEEEeCCCCcceeeecc-CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 346788888877655444332 34456789998877777665 457899999875 222222221122344566765
Q ss_pred CCCCEEEEEeCCCcEEEEEccCCeeeeEEee--cCceeEEEEccCCCEEEEEeC--CCcEEEEECCCCeeeEEEeccccc
Q 017314 183 ISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF--HSNCNALAFSMDGQTIFSGHI--DGNLRLWDIQTGKLLSEVAAHSLA 258 (373)
Q Consensus 183 ~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~ 258 (373)
..++++++-...+.|.+.++..... ..+.. ......+++.|.+.+|+.+.. .+.|..+++.... ...+......
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~-~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~ 540 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKR-KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQ 540 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCE-EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCS
T ss_pred eCCcEEEEeccCCeEEEEecCCCce-EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCC
Confidence 5566666666778899999875433 22221 134678899997665554432 2678887775332 2223222234
Q ss_pred ceEEEEEcCCCC-EEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceE
Q 017314 259 AVTSISLSRSGN-IILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADI 337 (373)
Q Consensus 259 ~v~~~~~~~~~~-~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~ 337 (373)
..+.|+++|++. ++++-+..+.|..+++..... ..+.........+. .+++..+ .++++....+.|..++..+++.
T Consensus 541 ~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~-glavd~~-~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPF-SLAVFED-KVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCC-CCEEETT-EEEEECSTTTCEEEEETTTEEE
T ss_pred CccEEEEeccCCEEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCce-EeEEECC-EEEEEeCCCCeEEEEEccCCCc
Confidence 567899998754 555666678899998864221 12211111111111 1234333 4555666778999999988888
Q ss_pred EEEeccCCccEEEEEE
Q 017314 338 VRTLKEHTAPVLSCSW 353 (373)
Q Consensus 338 ~~~l~~h~~~V~~~~~ 353 (373)
+..+.......+.+++
T Consensus 618 ~~~i~~~~~~P~~i~v 633 (699)
T 1n7d_A 618 VNLLAENLLSPEDMVL 633 (699)
T ss_dssp EECCCTTCSSCCCCCB
T ss_pred eEEeecCCCCCcEEEE
Confidence 8777543323344443
No 291
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.13 E-value=0.0072 Score=58.14 Aligned_cols=226 Identities=8% Similarity=0.012 Sum_probs=139.3
Q ss_pred CCCcEEEEeCCCCceeeecc-ccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCC
Q 017314 108 QDKSIKLWDTNTGSLSSTLY-GCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISS 185 (373)
Q Consensus 108 ~D~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 185 (373)
....|+..|+++......+. .....+..++|.+.+..|+.+. .++.|+.+++........+..-......+++.+..+
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 45678888887654332222 2234677899999877777665 567899999876544444443334566788877666
Q ss_pred CEEEEEeCCCcEEEEEccCCeeeeEEe--ecCceeEEEEccCCCEEEEEeC--CCcEEEEECCCCeeeEEEecccccceE
Q 017314 186 RHVVSAAYDRTLKVWDLHKGYCVNTII--FHSNCNALAFSMDGQTIFSGHI--DGNLRLWDIQTGKLLSEVAAHSLAAVT 261 (373)
Q Consensus 186 ~~~~s~s~D~~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~ 261 (373)
+..++-...+.|.+.++..... ..+. .-.....+++.|....|+.... .+.|...++..... ..+.. ......
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~-~~~~P~ 169 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHR-QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVP-NVGRAN 169 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTC-EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEEC-SCSSEE
T ss_pred EEEEEECCCCEEEEEecCCCcE-EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEEC-CCCCcc
Confidence 6667777788899999865432 2222 1234789999996666665442 56788888765433 22322 335788
Q ss_pred EEEEcCCCCEEEE-eeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEE
Q 017314 262 SISLSRSGNIILT-SGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRT 340 (373)
Q Consensus 262 ~~~~~~~~~~l~s-~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~ 340 (373)
.|+++++++.|.. -...+.|..+|+..... ..+... ...++ .+++.. +..+++-...+.|...|..+++....
T Consensus 170 GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~---l~~P~-glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~ 243 (628)
T 4a0p_A 170 GLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD---LPHPF-GLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTI 243 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC---CSCEE-EEEEET-TEEEEEETTTTEEEEEETTTCCSCEE
T ss_pred eEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc---CCCce-EEEEEC-CEEEEecCCCCEEEEEECCCCCceEE
Confidence 9999997665554 45667888888865332 112111 11122 133433 45556666678898888777655444
Q ss_pred ec
Q 017314 341 LK 342 (373)
Q Consensus 341 l~ 342 (373)
+.
T Consensus 244 l~ 245 (628)
T 4a0p_A 244 IQ 245 (628)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 292
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.11 E-value=0.0038 Score=61.57 Aligned_cols=202 Identities=11% Similarity=0.015 Sum_probs=123.5
Q ss_pred ccCcEEEEEEcCCCCEE-EEeeCCCcEEEEeCCCC----ceeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcC
Q 017314 87 HEGGCASILFEYNSARL-ISGGQDKSIKLWDTNTG----SLSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVN 160 (373)
Q Consensus 87 h~~~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~ 160 (373)
....+.+++|++.+..| ++-...+.|+.+++... .....+.........|++.+.++.|+.+. ..+.|.+.++.
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 34567789999855544 55556688998988753 22222332345667899998887666554 56789999987
Q ss_pred CCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCC-CcEEEEEccCCeeeeEEeec--CceeEEEEccCCCEEEEEe-CCC
Q 017314 161 SGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYD-RTLKVWDLHKGYCVNTIIFH--SNCNALAFSMDGQTIFSGH-IDG 236 (373)
Q Consensus 161 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D-~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~g~~l~sg~-~dg 236 (373)
.......+...-.....|++.|..+.++++-... +.|...++..... ..+... ...+.|++.+.+..|+.+. ..+
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~ 580 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTENIQWPNGITLDLLSGRLYWVDSKLH 580 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEeCCCCCceEEEEecCCCeEEEEeCCCC
Confidence 6554444444445678899988655555554333 6788888764432 222221 3478999998777777654 456
Q ss_pred cEEEEECCCCeeeEEEecc-cccceEEEEEcCCCCEEEEeeCCCeEEEEEccccc
Q 017314 237 NLRLWDIQTGKLLSEVAAH-SLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLE 290 (373)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~ 290 (373)
.|...|+........+... ......+|++.. ++++++-...+.|...|..+++
T Consensus 581 ~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 581 SISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGS 634 (791)
T ss_dssp EEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred cEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCc
Confidence 7999998654433333221 123345666643 3455555666777777755443
No 293
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.11 E-value=0.0025 Score=55.86 Aligned_cols=214 Identities=9% Similarity=0.032 Sum_probs=121.8
Q ss_pred CCCcEEEEEcCCCe--eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec--CceeEEEEccC
Q 017314 150 SSNNLYVWDVNSGR--VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH--SNCNALAFSMD 225 (373)
Q Consensus 150 ~d~~i~iwd~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~--~~~~~~~~~~~ 225 (373)
....|+..|+.... ....+. ....+.+++|.+..+..+++-...+.|..+++..+.....+... .....+++.+.
T Consensus 11 ~~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 11 NRRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp CEEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT
T ss_pred ccCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC
Confidence 35678999987653 222222 22345678888766666677777889999998765322222111 34678899875
Q ss_pred CCEE-EEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEee--CCCeEEEEEccccceeeeeeecCCee
Q 017314 226 GQTI-FSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSG--RDNLHNLFDIRSLEVCGSLRATGNRV 302 (373)
Q Consensus 226 g~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~d~~i~~~d~~~~~~~~~~~~~~~~~ 302 (373)
+..| ++-...+.|.++++.... ...+..........++++|.+..|..+. ....|..+++..... ..+.... +
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~-~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~~--l 165 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSL-RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSE--I 165 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEECSS--C
T ss_pred CCeEEEEECCCCEEEEEECCCCc-EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEECC--C
Confidence 5555 455567889999986543 2333323335678999998766555444 356777777653211 1111111 1
Q ss_pred ecCeeeeEECCCCcEE-EEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeEE
Q 017314 303 ASNWSRSCISPDESYV-AAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVVC 370 (373)
Q Consensus 303 ~~~~~~~~~s~~~~~l-~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i~ 370 (373)
..-+.++++|++..| ++=+..+.|..+++........+.+.......+++.. +..+.+-...+.|.
T Consensus 166 -~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~ 232 (318)
T 3sov_A 166 -YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSIL 232 (318)
T ss_dssp -SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEE
T ss_pred -CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEE
Confidence 112346788865554 4556678899999864333222332333445666643 23444433445444
No 294
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=98.08 E-value=0.015 Score=59.93 Aligned_cols=275 Identities=16% Similarity=0.156 Sum_probs=142.6
Q ss_pred cCcEEEEEEcCC------CCEEEEeeC-CCcEEEEeCCCCceeeecc-ccccceEEEEEc--CCCCEEEEEeCCCcEEEE
Q 017314 88 EGGCASILFEYN------SARLISGGQ-DKSIKLWDTNTGSLSSTLY-GCLGSVLDLAIT--HDNRSVIAASSSNNLYVW 157 (373)
Q Consensus 88 ~~~v~~~~~~~~------~~~l~s~s~-D~~v~iwd~~~~~~~~~~~-~~~~~v~~~~~~--~~~~~l~s~s~d~~i~iw 157 (373)
.+.|.|+.+.+. +..++.|.. |++|+|+++.+.+.+.... +......++.+. ....+|..|-.||.+..+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~ 632 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYF 632 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEE
Confidence 457899998764 368899986 9999999998755443211 111223333322 233578888899987555
Q ss_pred Ec--CCCeeEE---EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-Cce-eEEEEccC--CCE
Q 017314 158 DV--NSGRVRH---TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-SNC-NALAFSMD--GQT 228 (373)
Q Consensus 158 d~--~~~~~~~---~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-~~~-~~~~~~~~--g~~ 228 (373)
.+ .+|++.. .+-| +.++.-..+... +...+-+..++..-++--+ ++...+ ... ..+ ....|+.. ..-
T Consensus 633 ~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~-~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~~~~~F~se~~~~g 708 (1158)
T 3ei3_A 633 GLNIETGLLSDRKKVTLG-TQPTVLRTFRSL-STTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVNYMCPLNSDGYPDS 708 (1158)
T ss_dssp EECTTTCCEEEEEEEECC-SSCCEEEEEESS-SCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCCEEEEECCSSSTTE
T ss_pred EEcCCCCccccceeEEcC-CCceEEEEEeeC-CceeEEEECCCCEEEEEcC-CceEEe-ccChHHhceEeccCcccCCCc
Confidence 44 4554322 2333 345544444332 2233333335555554433 221111 111 112 23344332 123
Q ss_pred EEEEeCCCcEEEEECCCCee--eEEEecccccceEEEEEcCCCCEEEEeeCC----------------------------
Q 017314 229 IFSGHIDGNLRLWDIQTGKL--LSEVAAHSLAAVTSISLSRSGNIILTSGRD---------------------------- 278 (373)
Q Consensus 229 l~sg~~dg~i~iwd~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d---------------------------- 278 (373)
++. ..++.++|.-+...+. ++++... ..+..++++|..+.++.+..+
T Consensus 709 ~v~-~~~~~LrI~~i~~~~~~~~~~ipL~--~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 785 (1158)
T 3ei3_A 709 LAL-ANNSTLTIGTIDEIQKLHIRTVPLY--ESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSS 785 (1158)
T ss_dssp EEE-ECSSCEEEEEECCSSSEEEEEEECS--SEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECC
T ss_pred EEE-EcCCceEEEEecccCCeeEEEEeCC--CCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhhhhcccc
Confidence 443 3345688877654322 2222222 356666676666544332211
Q ss_pred ---------------------CeEEEEEccccceeeeeeecCCeeecCeeeeEECC-CCcEEEEEe----------CCCc
Q 017314 279 ---------------------NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISP-DESYVAAGS----------ADGS 326 (373)
Q Consensus 279 ---------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~-~~~~l~sgs----------~Dg~ 326 (373)
..++++|..+++.+..+....+........+.|.. ...||+.|+ ..|.
T Consensus 786 ~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gr 865 (1158)
T 3ei3_A 786 SKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGR 865 (1158)
T ss_dssp CCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEE
T ss_pred cccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceE
Confidence 23567777666666555544444333222222332 247888887 2478
Q ss_pred EEEEEccCceEEEEe-ccCCccEEEEE-EcCCCCcEEEEeCCCeEEEcC
Q 017314 327 VYIWSISKADIVRTL-KEHTAPVLSCS-WSGLGKPLASADKNGVVCVWT 373 (373)
Q Consensus 327 i~iwd~~~~~~~~~l-~~h~~~V~~~~-~s~~g~~l~s~s~dg~i~iW~ 373 (373)
|+++++..+++.... ....++|++++ |. |+.||+. ...|++|+
T Consensus 866 i~vf~v~~~kL~lv~~~~v~g~v~al~~~~--g~Lla~i--g~~l~vy~ 910 (1158)
T 3ei3_A 866 IVVFQYSDGKLQTVAEKEVKGAVYSMVEFN--GKLLASI--NSTVRLYE 910 (1158)
T ss_dssp EEEEEEETTEEEEEEEEEESSCEEEEEEET--TEEEEEE--TTEEEEEE
T ss_pred EEEEEEECCEEEEEEEEEcCCcCEEEeeeC--CEEEEEc--CCEEEEEE
Confidence 999999755432222 13467888887 53 5555544 36677763
No 295
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.07 E-value=0.0055 Score=54.50 Aligned_cols=232 Identities=10% Similarity=0.031 Sum_probs=117.3
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCee--EEEee---cCCCcEEEEEEeeC---CCCEEEEEeCC-----CcE
Q 017314 131 GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRV--RHTLT---GHTDKVCAVDVSKI---SSRHVVSAAYD-----RTL 197 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~--~~~~~---~h~~~v~~~~~~~~---~~~~~~s~s~D-----~~i 197 (373)
.....++|.|+|++ +.+..++.|++++ +++. +..+. ........++++|. .+...++-... ..|
T Consensus 31 ~~P~~ia~~pdG~l-~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGM-LIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCE-EEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeE-EEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34678999999985 4456679999998 4432 22221 11345678888874 23344444432 567
Q ss_pred EEEEccCCee-----e-eEEee-c---CceeEEEEccCCCEEEEEeC-------------CCcEEEEECCCC--------
Q 017314 198 KVWDLHKGYC-----V-NTIIF-H---SNCNALAFSMDGQTIFSGHI-------------DGNLRLWDIQTG-------- 246 (373)
Q Consensus 198 ~vwd~~~~~~-----~-~~~~~-~---~~~~~~~~~~~g~~l~sg~~-------------dg~i~iwd~~~~-------- 246 (373)
..++...+.. + ..+.. . .....++|.|||.+.++-+. .|.|.-+|....
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 7777764321 1 11221 0 12467999999976665332 145655665420
Q ss_pred ----eeeEEEecccccceEEEEEcC-CCCEEEEeeCCCeE------EEEEccccceee------e--eeecCCee-----
Q 017314 247 ----KLLSEVAAHSLAAVTSISLSR-SGNIILTSGRDNLH------NLFDIRSLEVCG------S--LRATGNRV----- 302 (373)
Q Consensus 247 ----~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i------~~~d~~~~~~~~------~--~~~~~~~~----- 302 (373)
.....+.... .....++|+| ++.++++-...+.+ .+.-+......+ . ......+.
T Consensus 188 ~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~ 266 (352)
T 2ism_A 188 GRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWPQ 266 (352)
T ss_dssp TCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTT
T ss_pred CCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecCC
Confidence 0111111111 2356789999 67766654333321 122222111000 0 00000000
Q ss_pred ecCeeeeEECCCCcEEEEEeCCCcEEEEEccCce----E--EEEeccCCccEEEEEEcCCCCcEEEEe-CCC
Q 017314 303 ASNWSRSCISPDESYVAAGSADGSVYIWSISKAD----I--VRTLKEHTAPVLSCSWSGLGKPLASAD-KNG 367 (373)
Q Consensus 303 ~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~----~--~~~l~~h~~~V~~~~~s~~g~~l~s~s-~dg 367 (373)
......++| .+|.++++.-..+.|...++.... . ...+-.-...+..+++.|||...++.. .+|
T Consensus 267 ~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~~~g 337 (352)
T 2ism_A 267 GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSNRDG 337 (352)
T ss_dssp CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECSTTT
T ss_pred CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeCCCC
Confidence 001112334 467777666667778777775432 1 122212235789999999998666553 344
No 296
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.06 E-value=0.00026 Score=69.95 Aligned_cols=191 Identities=11% Similarity=0.093 Sum_probs=102.2
Q ss_pred cEEEEEEe-eCCCCEEE-EEeCCC----cEEEEEccCC-eeeeE-EeecCceeEEEEccCCCEEEEEeCC-----CcEEE
Q 017314 174 KVCAVDVS-KISSRHVV-SAAYDR----TLKVWDLHKG-YCVNT-IIFHSNCNALAFSMDGQTIFSGHID-----GNLRL 240 (373)
Q Consensus 174 ~v~~~~~~-~~~~~~~~-s~s~D~----~i~vwd~~~~-~~~~~-~~~~~~~~~~~~~~~g~~l~sg~~d-----g~i~i 240 (373)
.+....|+ | +++.++ +.+.+| +|+++|+.++ ..+.. +. .....++|+|||+.|+-...| ..|..
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 45567788 7 455554 444333 5999999988 53211 11 113468899999888766655 25888
Q ss_pred EECCCCeee--EEEecccccceEEEEEcCCCCEEEEee---CCCeEEEEEccccc-ee--eeeeecCCeeecCeeeeEEC
Q 017314 241 WDIQTGKLL--SEVAAHSLAAVTSISLSRSGNIILTSG---RDNLHNLFDIRSLE-VC--GSLRATGNRVASNWSRSCIS 312 (373)
Q Consensus 241 wd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~s~~---~d~~i~~~d~~~~~-~~--~~~~~~~~~~~~~~~~~~~s 312 (373)
+++.+++.. ..+..........+.|+|||++|+..+ ....+.++|+.+.. .. ..+..... ...+. ..++
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~--~~~~s-~~~~ 328 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREK--GVRYD-VQMH 328 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCT--TCCEE-EEEE
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCC--CceEE-Eeee
Confidence 888776422 222222223456789999999877654 23457778876541 11 11211110 11111 1112
Q ss_pred CCCcEE-EEEeCC--C--cEEEEEccCceEEEE-eccCCc--cEEEEEEcCCCCcEEEEeCCCeEEEc
Q 017314 313 PDESYV-AAGSAD--G--SVYIWSISKADIVRT-LKEHTA--PVLSCSWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 313 ~~~~~l-~sgs~D--g--~i~iwd~~~~~~~~~-l~~h~~--~V~~~~~s~~g~~l~s~s~dg~i~iW 372 (373)
. |..| +....+ + .|..+++.++..... +-.|.. .+..+++. .+..+++...+|..+||
T Consensus 329 ~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~ 394 (751)
T 2xe4_A 329 G-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIW 394 (751)
T ss_dssp T-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEE
T ss_pred e-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEE
Confidence 2 5544 444333 2 566667654211122 223333 34556665 23455667778876664
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.00 E-value=0.0081 Score=57.73 Aligned_cols=226 Identities=7% Similarity=0.052 Sum_probs=130.0
Q ss_pred CCcEEEEeCCCCc-eeeeccccccceEEEEEcCCCCEEEEEeC-CCcEEEEEcCCCee-EEEeecCCCcEEEEEEeeCCC
Q 017314 109 DKSIKLWDTNTGS-LSSTLYGCLGSVLDLAITHDNRSVIAASS-SNNLYVWDVNSGRV-RHTLTGHTDKVCAVDVSKISS 185 (373)
Q Consensus 109 D~~v~iwd~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~s~-d~~i~iwd~~~~~~-~~~~~~h~~~v~~~~~~~~~~ 185 (373)
...|+..|+.... ....+......+..++|++.++.|+.+.. .+.|+.++++.... ...+..-......+++.+...
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~ 96 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 96 (619)
T ss_dssp SSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTT
T ss_pred cccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCC
Confidence 5678888876542 12222223445778999998887776665 56788898876532 233333335678888887666
Q ss_pred CEEEEEeCCCcEEEEEccCCeeeeEEe--ecCceeEEEEccCCCEEEEEeC--CCcEEEEECCCCeeeEEEecccccceE
Q 017314 186 RHVVSAAYDRTLKVWDLHKGYCVNTII--FHSNCNALAFSMDGQTIFSGHI--DGNLRLWDIQTGKLLSEVAAHSLAAVT 261 (373)
Q Consensus 186 ~~~~s~s~D~~i~vwd~~~~~~~~~~~--~~~~~~~~~~~~~g~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~ 261 (373)
+..++-...+.|.+.++..... ..+. .-.....+++.|.+.+|+.... .+.|...++.. .....+.........
T Consensus 97 ~ly~~d~~~~~I~v~~~dG~~~-~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~~~~~~~P~ 174 (619)
T 3s94_A 97 KLYWTDSETNRIEVSNLDGSLR-KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIINSEIYWPN 174 (619)
T ss_dssp EEEEEETTTTEEEEEETTSCSC-EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEECSSCSSEE
T ss_pred EEEEEeCCCCEEEEEECCCCCE-EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEEeCCCCCCc
Confidence 6677777789999999875432 2222 1234678999997666665443 45677777654 333333322335678
Q ss_pred EEEEcCCCCEEE-EeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEE
Q 017314 262 SISLSRSGNIIL-TSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRT 340 (373)
Q Consensus 262 ~~~~~~~~~~l~-s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~ 340 (373)
.|+++++++.|. +-...+.|..+|+...... .+.. .....++ .+++..+ ..+++-...+.|...|..+++....
T Consensus 175 Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~-~~~~--~~~~~P~-gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 175 GLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQ-AVVK--GSLPHPF-ALTLFED-ILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEESSSCCEEC------------CC-CEEESSS-EEEEECTTTCSEEEEESSSCCCCEE
T ss_pred EEEEEccCCEEEEEeCCCCeEEEecCCCCccE-EEEe--CCCCCce-EEEEeCC-EEEEecCCCCEEEEEECCCCcccEE
Confidence 999998766554 4455677888887543221 1111 0111111 2344444 4555556678899999877765544
Q ss_pred e
Q 017314 341 L 341 (373)
Q Consensus 341 l 341 (373)
+
T Consensus 250 i 250 (619)
T 3s94_A 250 I 250 (619)
T ss_dssp C
T ss_pred E
Confidence 4
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.96 E-value=0.0085 Score=57.67 Aligned_cols=199 Identities=10% Similarity=0.005 Sum_probs=126.0
Q ss_pred CcEEEEEEcCCCCEEE-EeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe-CCCcEEEEEcCCCeeEE
Q 017314 89 GGCASILFEYNSARLI-SGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS-SSNNLYVWDVNSGRVRH 166 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-~d~~i~iwd~~~~~~~~ 166 (373)
....+++|++.+..|+ +-..++.|..+++........+.........+++.+.++.|+.+. ..+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 4577899998766655 445678999999876543333332334567899988777666554 45789999987554333
Q ss_pred EeecCCCcEEEEEEeeCCCCEEEEE-eCCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEe-CCCcEEEEECC
Q 017314 167 TLTGHTDKVCAVDVSKISSRHVVSA-AYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGH-IDGNLRLWDIQ 244 (373)
Q Consensus 167 ~~~~h~~~v~~~~~~~~~~~~~~s~-s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~-~dg~i~iwd~~ 244 (373)
.+...-.....+++.|..+..++|- +..+.|...++...........-...+.+++++++..|+.+. ..+.|...|+.
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~d 196 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNML 196 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCC
Confidence 3333445568888987555544543 224667777765443222222224578999999877777654 56789999987
Q ss_pred CCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccc
Q 017314 245 TGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLE 290 (373)
Q Consensus 245 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~ 290 (373)
.... ..+... ......+++.. +.++.+-...+.|...|..+++
T Consensus 197 G~~~-~v~~~~-l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 197 GLNR-EVIADD-LPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQ 239 (628)
T ss_dssp SCSC-EEEEEC-CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCC
T ss_pred CCce-EEeecc-CCCceEEEEEC-CEEEEecCCCCEEEEEECCCCC
Confidence 5433 233222 24456777765 4566666667888888865443
No 299
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.87 E-value=0.0048 Score=53.65 Aligned_cols=159 Identities=11% Similarity=0.087 Sum_probs=102.1
Q ss_pred EEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC---------ceeEEEE---ccCCCEEEEEe----------
Q 017314 176 CAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS---------NCNALAF---SMDGQTIFSGH---------- 233 (373)
Q Consensus 176 ~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~---------~~~~~~~---~~~g~~l~sg~---------- 233 (373)
-+..|++..+.+.++.-..++|..||...+..... .... .+..+.+ .|+++++++..
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~ 94 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQ 94 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccc
Confidence 35667764454455555899999999876543333 2221 2468899 68877777543
Q ss_pred ---CCCcEEEEECC---CCeeeEEEecc------------cccceEEEEEcCCCCEEEEeeCC-CeEEEEEccccceeee
Q 017314 234 ---IDGNLRLWDIQ---TGKLLSEVAAH------------SLAAVTSISLSRSGNIILTSGRD-NLHNLFDIRSLEVCGS 294 (373)
Q Consensus 234 ---~dg~i~iwd~~---~~~~~~~~~~~------------~~~~v~~~~~~~~~~~l~s~~~d-~~i~~~d~~~~~~~~~ 294 (373)
.+..|..+|+. +++.+...... .......++.+++|+..++++.. +.|..++........-
T Consensus 95 ~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~ 174 (334)
T 2p9w_A 95 SSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGKTVSTF 174 (334)
T ss_dssp CSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSCCEEEE
T ss_pred ccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCCEEeee
Confidence 26779999999 78776655421 11247899999999999998887 7766666543221111
Q ss_pred eeec-CCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCc
Q 017314 295 LRAT-GNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKA 335 (373)
Q Consensus 295 ~~~~-~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~ 335 (373)
+... ........+-+++.|+|.+|++...+|.|..+|+...
T Consensus 175 ~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 175 AWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred eecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1111 0111122344678999988887766999999998753
No 300
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.74 E-value=0.006 Score=52.69 Aligned_cols=227 Identities=15% Similarity=0.122 Sum_probs=113.3
Q ss_pred CCCEEEEee-CC-----CcEEEEeCCCCceee--eccccccceEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCe--
Q 017314 99 NSARLISGG-QD-----KSIKLWDTNTGSLSS--TLYGCLGSVLDLAITHDNRSVIAASSS-----NNLYVWDVNSGR-- 163 (373)
Q Consensus 99 ~~~~l~s~s-~D-----~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~-- 163 (373)
++..++.|| .+ ..+.+||+.+++-.. .+.........+ ..++..++.|+.+ ..+.+||+.+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 344556666 32 468889987764321 111111111112 2356666777755 468999988765
Q ss_pred -eEEE--eecCCCcEEEEEEeeCCCCEEEEEeCC-----CcEEEEEccCCeeeeEEeecCc-eeEEEEccCCCEEEEEeC
Q 017314 164 -VRHT--LTGHTDKVCAVDVSKISSRHVVSAAYD-----RTLKVWDLHKGYCVNTIIFHSN-CNALAFSMDGQTIFSGHI 234 (373)
Q Consensus 164 -~~~~--~~~h~~~v~~~~~~~~~~~~~~s~s~D-----~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~sg~~ 234 (373)
-... +......-..+ . . ++..++.|+.+ ..+.++|+.++.....-..+.. ....+...++..++.|+.
T Consensus 92 ~W~~~~~~p~~r~~~~~~-~-~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~ 168 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGAT-T-L-GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGY 168 (301)
T ss_dssp CCEEECCCSSCCBSCEEE-E-E-TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCB
T ss_pred eeEECCCCCCCccceeEE-E-E-CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCC
Confidence 2221 11111111112 1 1 45566667654 3578889887654332222211 111112236666677765
Q ss_pred C-----CcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCC-----CeEEEEEccccceeeeeeecCCeee
Q 017314 235 D-----GNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRD-----NLHNLFDIRSLEVCGSLRATGNRVA 303 (373)
Q Consensus 235 d-----g~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~ 303 (373)
+ ..+.+||+.+.+-...-.... ......+.+ ++++++.|+.+ +.+.+||+.+.+-...-.......
T Consensus 169 ~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~- 245 (301)
T 2vpj_A 169 DGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRC- 245 (301)
T ss_dssp CSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCB-
T ss_pred CCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCccc-
Confidence 4 458899998765432211111 111222222 56777777764 457889987654321111111111
Q ss_pred cCeeeeEECCCCcEEEEEeCC-----CcEEEEEccCce
Q 017314 304 SNWSRSCISPDESYVAAGSAD-----GSVYIWSISKAD 336 (373)
Q Consensus 304 ~~~~~~~~s~~~~~l~sgs~D-----g~i~iwd~~~~~ 336 (373)
.. .+...+++.++.|+.+ ..|.+||+.+.+
T Consensus 246 -~~--~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 246 -YV--GATVLRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp -SC--EEEEETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred -ce--eEEEECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 11 1222367777777765 357888887654
No 301
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.73 E-value=0.037 Score=53.15 Aligned_cols=159 Identities=8% Similarity=-0.005 Sum_probs=97.1
Q ss_pred CcEEEEEEcCCCCEE-EEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCC--CcEEEEEcCCCeeE
Q 017314 89 GGCASILFEYNSARL-ISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSS--NNLYVWDVNSGRVR 165 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l-~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d--~~i~iwd~~~~~~~ 165 (373)
.....+++++.+..| ++-...+.|.+.++........+.........+++.|.+..|+.+... ..|...++......
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~ 163 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF 163 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceE
Confidence 457789999866655 455567899999987543322222344557789999987777777654 45666666543333
Q ss_pred EEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEe-ecCceeEEEEccCCCEEE-EEeCCCcEEEEEC
Q 017314 166 HTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTII-FHSNCNALAFSMDGQTIF-SGHIDGNLRLWDI 243 (373)
Q Consensus 166 ~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~-sg~~dg~i~iwd~ 243 (373)
......-.....+++.+..+...++=...+.|...|+.......... .......+++..+ .|+ +-...+.|...|.
T Consensus 164 ~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~ 241 (619)
T 3s94_A 164 IIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNK 241 (619)
T ss_dssp EEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEES
T ss_pred EEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEEC
Confidence 33333344567888887666666666677888888886543221111 1112345666544 444 4456778999998
Q ss_pred CCCeee
Q 017314 244 QTGKLL 249 (373)
Q Consensus 244 ~~~~~~ 249 (373)
.+++..
T Consensus 242 ~tg~~~ 247 (619)
T 3s94_A 242 YTGEGL 247 (619)
T ss_dssp SSCCCC
T ss_pred CCCccc
Confidence 776543
No 302
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.69 E-value=0.00022 Score=69.75 Aligned_cols=205 Identities=11% Similarity=0.032 Sum_probs=117.9
Q ss_pred CcEEEEEEcCCCCEEEEee-CCCcEEEEeCCC----CceeeeccccccceEEEEEcCCCCEEEEE-eCCCcEEEEEcCCC
Q 017314 89 GGCASILFEYNSARLISGG-QDKSIKLWDTNT----GSLSSTLYGCLGSVLDLAITHDNRSVIAA-SSSNNLYVWDVNSG 162 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s-~D~~v~iwd~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~-s~d~~i~iwd~~~~ 162 (373)
..+.+++|++.+..|+-+. ..+.|+.+++.+ ......+.........+++.+.++.|+.+ ...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 3456788998776665554 568899999875 22222222222345568888655555444 55678999998765
Q ss_pred eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCC-CcEEEEEccCCeeeeEEee--cCceeEEEEccCCCEEE-EEeCCCcE
Q 017314 163 RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYD-RTLKVWDLHKGYCVNTIIF--HSNCNALAFSMDGQTIF-SGHIDGNL 238 (373)
Q Consensus 163 ~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D-~~i~vwd~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~-sg~~dg~i 238 (373)
.....+.........+++.|..+.++++-... +.|.+.++.... ...+.. -...+.|+++|++..|+ +-+..+.|
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I 564 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 564 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSCCCEEECTTTCCEEEEETTTTEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCccEEEEeccCCEEEEEecCCCeE
Confidence 44333332234456677777555555544333 677777764322 112211 12367899999766555 44556789
Q ss_pred EEEECCCCeeeEEEec-ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeee
Q 017314 239 RLWDIQTGKLLSEVAA-HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSL 295 (373)
Q Consensus 239 ~iwd~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~ 295 (373)
..+|+........+.. ........|++..+ .++++....+.|..++..+++....+
T Consensus 565 ~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 565 SSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred EEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 9999865332222211 11123445566554 56666667788888887766655444
No 303
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.69 E-value=0.025 Score=50.16 Aligned_cols=219 Identities=14% Similarity=0.086 Sum_probs=113.9
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCce--eeec---cccccceEEEEEcCC---CCEEEEEeC-C-----CcEE
Q 017314 90 GCASILFEYNSARLISGGQDKSIKLWDTNTGSL--SSTL---YGCLGSVLDLAITHD---NRSVIAASS-S-----NNLY 155 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~--~~~~---~~~~~~v~~~~~~~~---~~~l~s~s~-d-----~~i~ 155 (373)
.-..++|.++|..+++ ..++.|++++ ++.. +..+ .........++|+|+ +..|+.+.. . +.|.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 4568999999985555 5679999998 3432 1111 122346788999998 555555443 2 6788
Q ss_pred EEEcCCCe-----eE-EEee---cCCCcEEEEEEeeCCCCEEEEEeC-------------CCcEEEEEccCC--------
Q 017314 156 VWDVNSGR-----VR-HTLT---GHTDKVCAVDVSKISSRHVVSAAY-------------DRTLKVWDLHKG-------- 205 (373)
Q Consensus 156 iwd~~~~~-----~~-~~~~---~h~~~v~~~~~~~~~~~~~~s~s~-------------D~~i~vwd~~~~-------- 205 (373)
.++...+. .+ ..+. +.......+.|.+ ++.+.++.+. .+.|.-+|....
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 88876542 11 1233 1111234677877 4555555332 145555554321
Q ss_pred ----eeeeEE-eecCceeEEEEcc-CCCEEEEEeCCCc--------EEEEECCCCe------------------eeEEEe
Q 017314 206 ----YCVNTI-IFHSNCNALAFSM-DGQTIFSGHIDGN--------LRLWDIQTGK------------------LLSEVA 253 (373)
Q Consensus 206 ----~~~~~~-~~~~~~~~~~~~~-~g~~l~sg~~dg~--------i~iwd~~~~~------------------~~~~~~ 253 (373)
.....+ ..+.+...++|+| +|.+.++-..... |.+. ..+. .+..+.
T Consensus 188 ~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i--~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 188 GRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI--VPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEE--CTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred CCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe--ccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 011111 2234467899999 6665554332222 3332 2221 111221
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccce------eeeeeecCCeeecCeeeeEECCCCcEEEEE
Q 017314 254 AHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEV------CGSLRATGNRVASNWSRSCISPDESYVAAG 321 (373)
Q Consensus 254 ~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~------~~~~~~~~~~~~~~~~~~~~s~~~~~l~sg 321 (373)
.+ .....++| .+|.++++.-..+.|...++..... ...+... ......+++.|||.+.++.
T Consensus 266 ~~--~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~----~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 266 QG--FPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSG----FGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp TC--CCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEES----SCCEEEEEECTTSCEEEEE
T ss_pred CC--CCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheeccc----CCCeeEEEECCCCcEEEEE
Confidence 11 24566777 4677777776777777777654321 1111110 1122346778888766554
No 304
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.67 E-value=0.025 Score=49.61 Aligned_cols=232 Identities=12% Similarity=0.089 Sum_probs=114.7
Q ss_pred cCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecc---ccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCee
Q 017314 88 EGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLY---GCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRV 164 (373)
Q Consensus 88 ~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~ 164 (373)
...+.++.|++ ..++.++.++.|.. ....|+.-.... .+.+.+..+.+.+++..+++ +.++.|.. ..+.|+.
T Consensus 79 ~~~~~~i~~~~--~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~g~v~~-S~DgG~t 153 (327)
T 2xbg_A 79 DYRFNSVSFQG--NEGWIVGEPPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMI-TNVGAIYR-TKDSGKN 153 (327)
T ss_dssp CCEEEEEEEET--TEEEEEEETTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEE-ETTCCEEE-ESSTTSS
T ss_pred CccEEEEEecC--CeEEEEECCCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEE-eCCccEEE-EcCCCCC
Confidence 34678888875 34445566775554 222233222111 22345677777766655544 44554432 1122321
Q ss_pred -EEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEc--cCCeeeeEEeecCceeEEEEccCCCEEEEEeCCCcEEEE
Q 017314 165 -RHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDL--HKGYCVNTIIFHSNCNALAFSMDGQTIFSGHIDGNLRLW 241 (373)
Q Consensus 165 -~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iw 241 (373)
......+...+..+.+.+ ++.+++.+...+..+-+|- .+-..+ .......+..+.+.+++..+ .++.+|.+++.
T Consensus 154 W~~~~~~~~~~~~~~~~~~-~~~~~~~g~~G~~~~S~d~gG~tW~~~-~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s 230 (327)
T 2xbg_A 154 WQALVQEAIGVMRNLNRSP-SGEYVAVSSRGSFYSTWEPGQTAWEPH-NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFS 230 (327)
T ss_dssp EEEEECSCCCCEEEEEECT-TSCEEEEETTSSEEEEECTTCSSCEEE-ECCSSSCEEEEEECTTSCEE-EEETTTEEEEE
T ss_pred CEEeecCCCcceEEEEEcC-CCcEEEEECCCcEEEEeCCCCCceeEC-CCCCCCccceeEECCCCCEE-EEeCCceEEEe
Confidence 222234455677888776 4555555443333344442 111121 11123456788888988755 45567888777
Q ss_pred ECCCCeeeEEEecc---cccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEE
Q 017314 242 DIQTGKLLSEVAAH---SLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYV 318 (373)
Q Consensus 242 d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l 318 (373)
+...++.-..+... ....+.++.+.+++.+++++. ++.+ ++....++.-..+... ......+..+.+.+++. +
T Consensus 231 ~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~-~~~~~~~~~v~~~~~~~-~ 306 (327)
T 2xbg_A 231 DPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDV-KKVPSNFYKILFFSPDQ-G 306 (327)
T ss_dssp ETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGG-TTSSSCCCEEEEEETTE-E
T ss_pred cCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCcc-CCCCCCeEEEEEECCCc-e
Confidence 53334433322211 113578899998888777665 4544 2322222111111100 00112233344554444 5
Q ss_pred EEEeCCCcEEEEE
Q 017314 319 AAGSADGSVYIWS 331 (373)
Q Consensus 319 ~sgs~Dg~i~iwd 331 (373)
+.++.+|.|.-++
T Consensus 307 ~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 307 FILGQKGILLRYV 319 (327)
T ss_dssp EEECSTTEEEEEC
T ss_pred EEEcCCceEEEEc
Confidence 5666788776654
No 305
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.63 E-value=0.021 Score=49.32 Aligned_cols=223 Identities=12% Similarity=0.108 Sum_probs=111.5
Q ss_pred EEEEeeC--CCcEEEEeCCCCceee--eccccccceEEEEEcCCCCEEEEEeCC----CcEEEEEcCCCeeEEEeecCCC
Q 017314 102 RLISGGQ--DKSIKLWDTNTGSLSS--TLYGCLGSVLDLAITHDNRSVIAASSS----NNLYVWDVNSGRVRHTLTGHTD 173 (373)
Q Consensus 102 ~l~s~s~--D~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~s~d----~~i~iwd~~~~~~~~~~~~h~~ 173 (373)
.++.||. ...+.+||..+++-.. .+.........+. .++..++.|+.+ ..+.+||+.+.+-...-.-...
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~ 91 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTP 91 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSC
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcc
Confidence 4455554 3578899988764321 1111111112222 356666777655 5788999988753322111111
Q ss_pred cE-EEEEEeeCCCCEEEEEeCC------CcEEEEEccCCeeeeEEeecCc-eeEEEEccCCCEEEEEeC---------CC
Q 017314 174 KV-CAVDVSKISSRHVVSAAYD------RTLKVWDLHKGYCVNTIIFHSN-CNALAFSMDGQTIFSGHI---------DG 236 (373)
Q Consensus 174 ~v-~~~~~~~~~~~~~~s~s~D------~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~sg~~---------dg 236 (373)
.. .++.. .++..++.|+.+ ..+.+||..+......-..+.. ....+...++..++.|+. -.
T Consensus 92 r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 169 (306)
T 3ii7_A 92 RDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLN 169 (306)
T ss_dssp CBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECC
T ss_pred ccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccc
Confidence 11 11111 145566777765 5688899887754322111111 111112235666666653 34
Q ss_pred cEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCC-----CeEEEEEccccce--eeeeeecCCeeecCeee
Q 017314 237 NLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRD-----NLHNLFDIRSLEV--CGSLRATGNRVASNWSR 308 (373)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~--~~~~~~~~~~~~~~~~~ 308 (373)
.+.+||+.+.+-...-.... ...-..+.+ ++++++.||.+ ..+.+||+.+.+- +..+.. .. ...
T Consensus 170 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r--~~~-- 241 (306)
T 3ii7_A 170 SCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPW--KG--VTV-- 241 (306)
T ss_dssp CEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSC--CB--SCC--
T ss_pred eEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCC--Cc--cce--
Confidence 58899998875432211111 111222222 56677777654 3567888776432 211111 11 011
Q ss_pred eEECCCCcEEEEEeCC-----CcEEEEEccCce
Q 017314 309 SCISPDESYVAAGSAD-----GSVYIWSISKAD 336 (373)
Q Consensus 309 ~~~s~~~~~l~sgs~D-----g~i~iwd~~~~~ 336 (373)
.+..-++.+++.|+.+ ..+.+||+.+.+
T Consensus 242 ~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 242 KCAAVGSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEEETTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred eEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 1122367788888754 468889987754
No 306
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.60 E-value=0.017 Score=49.88 Aligned_cols=226 Identities=11% Similarity=0.127 Sum_probs=110.8
Q ss_pred CCEEEEeeCC----CcEEEEeCCCCceee--eccccccceEEEEEcCCCCEEEEEeCC-----CcEEEEEcCCCeeEEE-
Q 017314 100 SARLISGGQD----KSIKLWDTNTGSLSS--TLYGCLGSVLDLAITHDNRSVIAASSS-----NNLYVWDVNSGRVRHT- 167 (373)
Q Consensus 100 ~~~l~s~s~D----~~v~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~~~- 167 (373)
+..++.||.+ ..+..||+.+..-.. .+.........+. .++..++.|+.+ ..+.+||+.+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~ 93 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA 93 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCCceeeCC
Confidence 3445555543 457888887764321 1111111111122 256666676654 3588999887753222
Q ss_pred -eecCCCcEEEEEEeeCCCCEEEEEeCCC-----cEEEEEccCCeeeeEEeecCc--eeEEEEccCCCEEEEEeCC----
Q 017314 168 -LTGHTDKVCAVDVSKISSRHVVSAAYDR-----TLKVWDLHKGYCVNTIIFHSN--CNALAFSMDGQTIFSGHID---- 235 (373)
Q Consensus 168 -~~~h~~~v~~~~~~~~~~~~~~s~s~D~-----~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~g~~l~sg~~d---- 235 (373)
+....... ++.. .++..++.|+.++ .+.+||+.+......-..+.. ..+++. .++..++.|+.+
T Consensus 94 ~~p~~r~~~-~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 94 NMRDRRSTL-GAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASR 169 (302)
T ss_dssp CCSSCCBSC-EEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTT
T ss_pred CCCccccce-EEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCC
Confidence 11111111 1212 1456667777653 467788877654322111111 112222 356666666543
Q ss_pred ---CcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCC-----CeEEEEEccccceeeeeeecCCeeecCe
Q 017314 236 ---GNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRD-----NLHNLFDIRSLEVCGSLRATGNRVASNW 306 (373)
Q Consensus 236 ---g~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 306 (373)
..+.+||+.+.+-...-.... ......+.+ ++++++.||.+ +.+.+||+.+.+-...-.....+. .
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~--~- 244 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRR--N- 244 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCB--S-
T ss_pred ccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccc--c-
Confidence 358899998765432211111 111222222 56777777764 357788887643321111111111 1
Q ss_pred eeeEECCCCcEEEEEeCCC-----cEEEEEccCceE
Q 017314 307 SRSCISPDESYVAAGSADG-----SVYIWSISKADI 337 (373)
Q Consensus 307 ~~~~~s~~~~~l~sgs~Dg-----~i~iwd~~~~~~ 337 (373)
..+...+++.++.|+.++ .+.+||+.+.+-
T Consensus 245 -~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 245 -AGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp -CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred -CeEEEECCEEEEECCcCCCcccccEEEEcCCCCeE
Confidence 112223677777887654 488999877643
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.60 E-value=0.034 Score=49.33 Aligned_cols=238 Identities=14% Similarity=0.086 Sum_probs=121.1
Q ss_pred ccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEee-------cCCCcEEEEEEeeC---CCCEEEEEeC------
Q 017314 130 LGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLT-------GHTDKVCAVDVSKI---SSRHVVSAAY------ 193 (373)
Q Consensus 130 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~-------~h~~~v~~~~~~~~---~~~~~~s~s~------ 193 (373)
......++|.|+|+.++.+...+.|++++.. +.....+. ........++++|. ++...++-+.
T Consensus 17 l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 17 LDHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp ESSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 3456789999999844556678899999854 33211111 11234578888873 3433444332
Q ss_pred -CCcEEEEEccCC--e--eeeEEee--------cCceeEEEEccCCCEEEEEeC-------------CCcEEEEECCCCe
Q 017314 194 -DRTLKVWDLHKG--Y--CVNTIIF--------HSNCNALAFSMDGQTIFSGHI-------------DGNLRLWDIQTGK 247 (373)
Q Consensus 194 -D~~i~vwd~~~~--~--~~~~~~~--------~~~~~~~~~~~~g~~l~sg~~-------------dg~i~iwd~~~~~ 247 (373)
...|..|++..+ . ....+.. ......++|.|||.+.++-+. .|.|.-+|....-
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 224555665432 1 1111110 112457999999965555432 2456666664320
Q ss_pred ------------eeEEEecccccceEEEEEcC-CCCEEEEee-CCCeEEEEEccccceee--------e-----e-----
Q 017314 248 ------------LLSEVAAHSLAAVTSISLSR-SGNIILTSG-RDNLHNLFDIRSLEVCG--------S-----L----- 295 (373)
Q Consensus 248 ------------~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~-~d~~i~~~d~~~~~~~~--------~-----~----- 295 (373)
....+.... .....++|+| +++++++-. .++.-.|.-+......+ . +
T Consensus 176 p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 111121111 3477899999 666555432 22222222222111000 0 0
Q ss_pred ---eecCCee-----ecCeeeeEEC-------CCCcEEEEEeCCCcEEEEEccCceEEEE---eccCCccEEEEEEcCCC
Q 017314 296 ---RATGNRV-----ASNWSRSCIS-------PDESYVAAGSADGSVYIWSISKADIVRT---LKEHTAPVLSCSWSGLG 357 (373)
Q Consensus 296 ---~~~~~~~-----~~~~~~~~~s-------~~~~~l~sgs~Dg~i~iwd~~~~~~~~~---l~~h~~~V~~~~~s~~g 357 (373)
.....++ ........|. .+|.++++.-..+.|...++..++.... +..-...+..+++.|||
T Consensus 255 ~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 334 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG 334 (353)
T ss_dssp SSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS
T ss_pred CCCCCccCCeEEeCCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC
Confidence 0000000 0011122332 2577888777788888888876654332 22333578999999999
Q ss_pred CcEEEEe-CCCeE
Q 017314 358 KPLASAD-KNGVV 369 (373)
Q Consensus 358 ~~l~s~s-~dg~i 369 (373)
...++.+ .+|.|
T Consensus 335 ~lyv~td~~~g~I 347 (353)
T 2g8s_A 335 YLYVLTDESSGEL 347 (353)
T ss_dssp CEEEEECSTTEEE
T ss_pred cEEEEEeCCCCEE
Confidence 9666544 45654
No 308
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.50 E-value=0.038 Score=48.91 Aligned_cols=175 Identities=10% Similarity=0.107 Sum_probs=94.9
Q ss_pred CCCcEEEEEcCC--Cee-EEEeec-----CCCcEEEEEEeeC-CC-CEEEEE-eC--CCcEEEEEccCCe----eeeEEe
Q 017314 150 SSNNLYVWDVNS--GRV-RHTLTG-----HTDKVCAVDVSKI-SS-RHVVSA-AY--DRTLKVWDLHKGY----CVNTII 212 (373)
Q Consensus 150 ~d~~i~iwd~~~--~~~-~~~~~~-----h~~~v~~~~~~~~-~~-~~~~s~-s~--D~~i~vwd~~~~~----~~~~~~ 212 (373)
.+|.|.++|+.+ ++. ...+.+ ..-....+++.+. ++ .+|+.+ .. +.+|.+|++..+. .+.++.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 678899999873 222 122333 1224566666552 22 234333 22 5778888776432 122222
Q ss_pred ec--CceeEEEEccCCCEEEEEeC-----------------CCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEE
Q 017314 213 FH--SNCNALAFSMDGQTIFSGHI-----------------DGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIIL 273 (373)
Q Consensus 213 ~~--~~~~~~~~~~~g~~l~sg~~-----------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 273 (373)
.. ...|.+.+.++|...++... .|.|.-+|. ++. ..+. .....-+.++|+||++.|.
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~-~~~~-~~l~~pNGia~spDg~~lY 236 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV-RVVA-EGFDFANGINISPDGKYVY 236 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC-EEEE-EEESSEEEEEECTTSSEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE-EEee-cCCcccCcceECCCCCEEE
Confidence 21 23789999999987776541 244555554 322 2222 1224678999999998766
Q ss_pred Ee-eCCCeEEEEEcccccee---eeeeecCCeeecCeeeeEECC-CCcEEEEEeCC-CcEEEEEcc
Q 017314 274 TS-GRDNLHNLFDIRSLEVC---GSLRATGNRVASNWSRSCISP-DESYVAAGSAD-GSVYIWSIS 333 (373)
Q Consensus 274 s~-~~d~~i~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~s~-~~~~l~sgs~D-g~i~iwd~~ 333 (373)
.+ +..+.|..|++...... ..+.. ....--.++++ +|.+.+++..+ +.|..|+..
T Consensus 237 vadt~~~~I~~~~~~~~g~l~~~~~~~~-----~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~ 297 (355)
T 3sre_A 237 IAELLAHKIHVYEKHANWTLTPLRVLSF-----DTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAE 297 (355)
T ss_dssp EEEGGGTEEEEEEECTTSCEEEEEEEEC-----SSEEEEEEECTTTCCEEEEEESCHHHHHSCCTT
T ss_pred EEeCCCCeEEEEEECCCCcEecCEEEeC-----CCCCceEEEeCCCCcEEEEecCCceEEEEECCC
Confidence 55 45688999998632111 11211 11112356788 58877766544 344444443
No 309
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.41 E-value=0.061 Score=47.70 Aligned_cols=225 Identities=13% Similarity=0.076 Sum_probs=116.9
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCc-eeeec---cccccceEEEEEcCC---CCEEEEEeC----C----Cc
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGS-LSSTL---YGCLGSVLDLAITHD---NRSVIAASS----S----NN 153 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~-~~~~~---~~~~~~v~~~~~~~~---~~~l~s~s~----d----~~ 153 (373)
..-..++|.++|..++ +..++.|+++|. ++. .+..+ .........++++|+ +..|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V-~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLV-TERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEE-EETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEE-EeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 3457899999987555 466799999973 444 22211 112345789999998 555555443 3 56
Q ss_pred EEEEEcCCC-------eeE-EEeec-CCCcEEEEEEeeCCCCEEEEEeC-------------CCcEEEEEccCC------
Q 017314 154 LYVWDVNSG-------RVR-HTLTG-HTDKVCAVDVSKISSRHVVSAAY-------------DRTLKVWDLHKG------ 205 (373)
Q Consensus 154 i~iwd~~~~-------~~~-~~~~~-h~~~v~~~~~~~~~~~~~~s~s~-------------D~~i~vwd~~~~------ 205 (373)
|..|+.... +.+ ..+.. .......+.|.+ ++.+.++-+. .+.|.-.+....
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~np 185 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNP 185 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCC
Confidence 777777654 111 11221 111234577777 4555555332 134544444321
Q ss_pred --eeeeEEeecCceeEEEEcc-CCCEEEEEeCCC---cEEEEECCCCe------------------eeEEEecccccceE
Q 017314 206 --YCVNTIIFHSNCNALAFSM-DGQTIFSGHIDG---NLRLWDIQTGK------------------LLSEVAAHSLAAVT 261 (373)
Q Consensus 206 --~~~~~~~~~~~~~~~~~~~-~g~~l~sg~~dg---~i~iwd~~~~~------------------~~~~~~~~~~~~v~ 261 (373)
........+.+...++|+| +|.+.++-.... .|.+.. .+. .+..+. +......
T Consensus 186 f~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~~ap~ 262 (354)
T 3a9g_A 186 FPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTG-SETWAPS 262 (354)
T ss_dssp STTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCCEE
T ss_pred CCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecC-CCCcCCc
Confidence 0011112334567899999 666555432221 243332 221 111220 1124577
Q ss_pred EEEE-------cCCCCEEEEeeCCCeEEEEEcccc-cee--eeeeecCCeeecCeeeeEECCCCcEEEEEe
Q 017314 262 SISL-------SRSGNIILTSGRDNLHNLFDIRSL-EVC--GSLRATGNRVASNWSRSCISPDESYVAAGS 322 (373)
Q Consensus 262 ~~~~-------~~~~~~l~s~~~d~~i~~~d~~~~-~~~--~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs 322 (373)
.+.| ..+|.++++.-..+.|..+++... ... ..+.. . .......+++.|||.+.++..
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~-~--~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFK-N--VFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECT-T--TSCCEEEEEECTTSCEEEEEC
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeecc-C--CCCCeeEEEECCCCcEEEEEe
Confidence 7888 356777777777778888877643 221 11111 0 011223466788887666553
No 310
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.35 E-value=0.095 Score=48.69 Aligned_cols=259 Identities=13% Similarity=0.141 Sum_probs=142.8
Q ss_pred EEEEeeCCCcEEEEeCCCCceeeecccc-------------------------ccce--EEEEEc---CCCCEEEEEeCC
Q 017314 102 RLISGGQDKSIKLWDTNTGSLSSTLYGC-------------------------LGSV--LDLAIT---HDNRSVIAASSS 151 (373)
Q Consensus 102 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~-------------------------~~~v--~~~~~~---~~~~~l~s~s~d 151 (373)
.+.|||..|.|+|+-+.+++.+..+... .+.. ..+.+. .||++|+.-...
T Consensus 72 ~f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiNdka 151 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFINDKA 151 (638)
T ss_dssp EEEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEEETT
T ss_pred EEeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEecCC
Confidence 3688999999999999887765442110 0000 112222 356777776644
Q ss_pred -CcEEEEEcCCCeeEEEeec-CCCcEEEEEEee-CCCCEEEEEeC-------CCcE---------EEE---EccCCeeee
Q 017314 152 -NNLYVWDVNSGRVRHTLTG-HTDKVCAVDVSK-ISSRHVVSAAY-------DRTL---------KVW---DLHKGYCVN 209 (373)
Q Consensus 152 -~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~-~~~~~~~s~s~-------D~~i---------~vw---d~~~~~~~~ 209 (373)
..|-..++...++...+.- ....+.++.+-. +...+++.++. ||.. .+| |..+-....
T Consensus 152 n~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm~v~~ 231 (638)
T 3sbq_A 152 NSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETMEMAF 231 (638)
T ss_dssp TTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTCSEEE
T ss_pred CcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEEEecceeeccCCCCCcccccCChhhceEEEEEcCCccEEEE
Confidence 3566778877776665542 345566666652 35667776654 2221 111 111111122
Q ss_pred EEeecCceeEEEEccCCCEEEEEeCCC---------------cEEEEE-------------------------CCC----
Q 017314 210 TIIFHSNCNALAFSMDGQTIFSGHIDG---------------NLRLWD-------------------------IQT---- 245 (373)
Q Consensus 210 ~~~~~~~~~~~~~~~~g~~l~sg~~dg---------------~i~iwd-------------------------~~~---- 245 (373)
++....+...+...++|.+.++.+.+. .+.++| .+.
T Consensus 232 Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~~~~~~~ 311 (638)
T 3sbq_A 232 QVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDGRKKDGK 311 (638)
T ss_dssp EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEECSCBTTB
T ss_pred EEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcccccccc
Confidence 222222333455577777777665422 233443 332
Q ss_pred Ceee-EEEecccccceEEEEEcCCCCEEEEeeC-CCeEEEEEcccccee---------eeeeecCCeeecCeeeeEECCC
Q 017314 246 GKLL-SEVAAHSLAAVTSISLSRSGNIILTSGR-DNLHNLFDIRSLEVC---------GSLRATGNRVASNWSRSCISPD 314 (373)
Q Consensus 246 ~~~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~-d~~i~~~d~~~~~~~---------~~~~~~~~~~~~~~~~~~~s~~ 314 (373)
+..+ .-+.. ......+.++|||++++.++. +.++.++|+++.... ..+.... .+...-...+|+++
T Consensus 312 ~~~~~~~iP~--pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~-e~GlGPlHt~Fd~~ 388 (638)
T 3sbq_A 312 DSKFTRYVPV--PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEP-ELGLGPLHTTFDGR 388 (638)
T ss_dssp CCSSEEEEEE--SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECC-BCCSCEEEEEECSS
T ss_pred CCceEEEEeC--CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeec-cCCCcccEEEECCC
Confidence 1111 11111 123456889999999887764 788999998853220 0000000 01111122578999
Q ss_pred CcEEEEEeCCCcEEEEEccCc----------eEEEEeccCCccEEEEE------EcCCCCcEEEEe
Q 017314 315 ESYVAAGSADGSVYIWSISKA----------DIVRTLKEHTAPVLSCS------WSGLGKPLASAD 364 (373)
Q Consensus 315 ~~~l~sgs~Dg~i~iwd~~~~----------~~~~~l~~h~~~V~~~~------~s~~g~~l~s~s 364 (373)
|.-..|---|..|.-|++... ..+..+.-|..+- .+. -.|||+||++..
T Consensus 389 G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpG-H~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 389 GNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPG-HLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp SEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEE-EEEETTTTSTTCCSCEEEEEE
T ss_pred CceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCCc-ccccCCCccCCCCccEEEEec
Confidence 966667778999999999764 4566666665432 222 368899998863
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.35 E-value=0.03 Score=48.17 Aligned_cols=205 Identities=17% Similarity=0.143 Sum_probs=100.0
Q ss_pred CcEEEEEcCCCeeEEE--eecCCCcEEEEEEeeCCCCEEEEEeCC-----CcEEEEEccCCe---eeeEEeecC-ceeEE
Q 017314 152 NNLYVWDVNSGRVRHT--LTGHTDKVCAVDVSKISSRHVVSAAYD-----RTLKVWDLHKGY---CVNTIIFHS-NCNAL 220 (373)
Q Consensus 152 ~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~s~s~D-----~~i~vwd~~~~~---~~~~~~~~~-~~~~~ 220 (373)
..+.+||+.+.+-... +....... ++.. .++..++.|+.+ ..+.+||..++. ....-..+. .....
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~ 107 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYV-ASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAG 107 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSC-EEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccc-cEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCcccee
Confidence 3678888877653221 11111111 1111 145566777755 468889987765 322111111 11111
Q ss_pred EEccCCCEEEEEeCCC-----cEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCC-----CeEEEEEcccc
Q 017314 221 AFSMDGQTIFSGHIDG-----NLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRD-----NLHNLFDIRSL 289 (373)
Q Consensus 221 ~~~~~g~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~ 289 (373)
+...++..++.|+.++ .+.+||+.+.+-...-.... .....++.+ ++++++.||.+ +.+..||+.+.
T Consensus 108 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 108 ATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 1223666666776543 58899988765432211111 111222222 56777777754 35778887654
Q ss_pred ceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCC-----CcEEEEEccCceEEEE--eccCCccEEEEEEcCCCCcEEE
Q 017314 290 EVCGSLRATGNRVASNWSRSCISPDESYVAAGSAD-----GSVYIWSISKADIVRT--LKEHTAPVLSCSWSGLGKPLAS 362 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~D-----g~i~iwd~~~~~~~~~--l~~h~~~V~~~~~s~~g~~l~s 362 (373)
+-...-....... . ..+...++..++.|+.+ ..+.+||+.+.+-... +.........+.+ +++.++.
T Consensus 186 ~W~~~~~~p~~r~--~--~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~ 259 (301)
T 2vpj_A 186 HWTNVTPMATKRS--G--AGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAI 259 (301)
T ss_dssp EEEEECCCSSCCB--S--CEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE
T ss_pred cEEeCCCCCcccc--c--ceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEE
Confidence 3321111111111 1 11222367777778764 4689999987654332 2111111122333 5677777
Q ss_pred EeCCC
Q 017314 363 ADKNG 367 (373)
Q Consensus 363 ~s~dg 367 (373)
|+.++
T Consensus 260 GG~~~ 264 (301)
T 2vpj_A 260 AGYDG 264 (301)
T ss_dssp CCBCS
T ss_pred cCcCC
Confidence 77653
No 312
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.35 E-value=0.063 Score=46.47 Aligned_cols=251 Identities=11% Similarity=0.124 Sum_probs=142.8
Q ss_pred CCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCE
Q 017314 108 QDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRH 187 (373)
Q Consensus 108 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 187 (373)
.+.+|.|-|+.++..+.... -..-+.-.+|..+.++--+ ..+++|+|+++.+.+..+.-. ..|.--.| .+.+.
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrp---i~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~~-e~VvfWkW--is~~~ 119 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKW--ISLNT 119 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEE---CCCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECS-SCEEEEEE--CSSSE
T ss_pred CCCEEEEEECCCCCCccccc---cccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceecC-CccEEEEe--cCCCe
Confidence 34478999998765432211 1112234567777666554 789999999998877776643 45544444 34455
Q ss_pred EEEEeCCCcEEEEEccCC-eeeeEEeecC-----ceeEEEEccCCCEEEEEe-------CCCcEEEEECCCCeeeEEEec
Q 017314 188 VVSAAYDRTLKVWDLHKG-YCVNTIIFHS-----NCNALAFSMDGQTIFSGH-------IDGNLRLWDIQTGKLLSEVAA 254 (373)
Q Consensus 188 ~~s~s~D~~i~vwd~~~~-~~~~~~~~~~-----~~~~~~~~~~g~~l~sg~-------~dg~i~iwd~~~~~~~~~~~~ 254 (373)
++--. +..|.-|++... .+.+-+..|. .+.....+++.++++..+ -.|.+.+|....+. -+.+.+
T Consensus 120 L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieG 197 (365)
T 2xzh_A 120 VALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEG 197 (365)
T ss_dssp EEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECC
T ss_pred EEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeee
Confidence 54332 567999999743 3444444442 245566778888776322 24678899887643 345566
Q ss_pred ccccceEEEEEcCC---CCEEEEeeC---CCeEEEEEcccc-ceeeeee-------ecCCeeecCe-eeeEECCCCcEEE
Q 017314 255 HSLAAVTSISLSRS---GNIILTSGR---DNLHNLFDIRSL-EVCGSLR-------ATGNRVASNW-SRSCISPDESYVA 319 (373)
Q Consensus 255 ~~~~~v~~~~~~~~---~~~l~s~~~---d~~i~~~d~~~~-~~~~~~~-------~~~~~~~~~~-~~~~~s~~~~~l~ 319 (373)
|. .....+.+.-+ .+++.-+.. .+.+++.++... .-...+. .... ...++ ....+|+.-..+.
T Consensus 198 ha-a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe-a~~DFPVamqvs~kygviy 275 (365)
T 2xzh_A 198 HA-ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE-AQNDFPVAMQISEKHDVVF 275 (365)
T ss_dssp SE-EEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTT-CTTCCEEEEEEETTTTEEE
T ss_pred ee-eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcc-ccCCceEEEEecccCCEEE
Confidence 64 33333332211 112222222 246777776432 0001110 0000 00111 1133566666777
Q ss_pred EEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeE
Q 017314 320 AGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVV 369 (373)
Q Consensus 320 sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i 369 (373)
.-+.-|.|.+||+.++.++..-+-...+|...+-+....-++....+|.|
T Consensus 276 viTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 276 LITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEE
T ss_pred EEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEE
Confidence 78889999999999999987766666677666655554555555566655
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.27 E-value=0.089 Score=46.62 Aligned_cols=228 Identities=13% Similarity=0.041 Sum_probs=120.0
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCe-eEEEee---cCCCcEEEEEEeeC---CCCEEEEEeC---C----Cc
Q 017314 131 GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR-VRHTLT---GHTDKVCAVDVSKI---SSRHVVSAAY---D----RT 196 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~-~~~~~~---~h~~~v~~~~~~~~---~~~~~~s~s~---D----~~ 196 (373)
.....++|.|+|+ |+.+..++.|+++| .+++ .+..+. ........++++|. ++...++-+. + ..
T Consensus 29 ~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTE-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 4467899999987 55556679999987 3454 222211 11245778888874 3444444432 3 56
Q ss_pred EEEEEccCC--ee-----e-eEEeec--CceeEEEEccCCCEEEEEeC-------------CCcEEEEECCCCee-----
Q 017314 197 LKVWDLHKG--YC-----V-NTIIFH--SNCNALAFSMDGQTIFSGHI-------------DGNLRLWDIQTGKL----- 248 (373)
Q Consensus 197 i~vwd~~~~--~~-----~-~~~~~~--~~~~~~~~~~~g~~l~sg~~-------------dg~i~iwd~~~~~~----- 248 (373)
|..|+...+ .. + ..+... .....++|.|||.+.++-+. .|.|.-+|... +.
T Consensus 107 v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG-~~p~~np 185 (354)
T 3a9g_A 107 VIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEG-RPPADNP 185 (354)
T ss_dssp EEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTS-CCCTTSS
T ss_pred EEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCC-CCCCCCC
Confidence 767776543 11 1 112211 12467999999987666432 24555555432 20
Q ss_pred ---eEEEecccccceEEEEEcC-CCCEEEEeeC-CC--eEEEEEccccceee-----------eeeecCC---eeecCee
Q 017314 249 ---LSEVAAHSLAAVTSISLSR-SGNIILTSGR-DN--LHNLFDIRSLEVCG-----------SLRATGN---RVASNWS 307 (373)
Q Consensus 249 ---~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~-d~--~i~~~d~~~~~~~~-----------~~~~~~~---~~~~~~~ 307 (373)
...+.... .....++|+| +++++++-.. +. .+.+.. .+...+ .+..... .......
T Consensus 186 f~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 186 FPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp STTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 01111111 2356799999 6776666433 22 233222 111000 0000000 0001112
Q ss_pred eeEE-------CCCCcEEEEEeCCCcEEEEEccCc-eEE--EE-eccCCccEEEEEEcCCCCcEEEEe
Q 017314 308 RSCI-------SPDESYVAAGSADGSVYIWSISKA-DIV--RT-LKEHTAPVLSCSWSGLGKPLASAD 364 (373)
Q Consensus 308 ~~~~-------s~~~~~l~sgs~Dg~i~iwd~~~~-~~~--~~-l~~h~~~V~~~~~s~~g~~l~s~s 364 (373)
.+++ ..+|.++++.-..+.|...++... +.. .. +.+-...+..+++.|||...++..
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 2344 246778877777788888888753 332 22 333345789999999998666654
No 314
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.27 E-value=0.1 Score=47.09 Aligned_cols=251 Identities=10% Similarity=0.104 Sum_probs=145.1
Q ss_pred CCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCE
Q 017314 108 QDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRH 187 (373)
Q Consensus 108 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 187 (373)
.+.+|.|-|+.++..+.... -..-+.-.+|..+.++--+ ..++.|+|+++.+.+..+.-.. .|.--.|-. .+.
T Consensus 46 ~~~~vvIiDl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis--~~~ 118 (494)
T 1bpo_A 46 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWIS--LNT 118 (494)
T ss_dssp TCCEEEEEETTSTTSCEEEE---CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEE--TTE
T ss_pred CCCeEEEEECCCCCcceecc---cccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecC--CCe
Confidence 34589999998765432211 1112334566666555544 7899999999988777766444 444444433 344
Q ss_pred EEEEeCCCcEEEEEccCC-eeeeEEeecC-----ceeEEEEccCCCEEEEEe-------CCCcEEEEECCCCeeeEEEec
Q 017314 188 VVSAAYDRTLKVWDLHKG-YCVNTIIFHS-----NCNALAFSMDGQTIFSGH-------IDGNLRLWDIQTGKLLSEVAA 254 (373)
Q Consensus 188 ~~s~s~D~~i~vwd~~~~-~~~~~~~~~~-----~~~~~~~~~~g~~l~sg~-------~dg~i~iwd~~~~~~~~~~~~ 254 (373)
++-- .+..|.-|++... .+.+.+..|. .+.....+++.++++..+ -.|.+.+|....+. -+.+.+
T Consensus 119 l~lV-T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieG 196 (494)
T 1bpo_A 119 VALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEG 196 (494)
T ss_dssp EEEE-CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECC
T ss_pred EEEE-cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchhee
Confidence 4322 3568999999643 3444444442 255566788888876322 24678899987643 345566
Q ss_pred ccccceEEEEEcCCC---CEEEEeeC---CCeEEEEEcccc-ceeeeee-------ecCCeeecCe-eeeEECCCCcEEE
Q 017314 255 HSLAAVTSISLSRSG---NIILTSGR---DNLHNLFDIRSL-EVCGSLR-------ATGNRVASNW-SRSCISPDESYVA 319 (373)
Q Consensus 255 ~~~~~v~~~~~~~~~---~~l~s~~~---d~~i~~~d~~~~-~~~~~~~-------~~~~~~~~~~-~~~~~s~~~~~l~ 319 (373)
|. .....+.+.-+. +++.-+.. .+.+.+.++... .....+. .... ...++ ....+++.-..+.
T Consensus 197 ha-a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe-~~~DFPvamqvs~kygviy 274 (494)
T 1bpo_A 197 HA-ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE-AQNDFPVAMQISEKHDVVF 274 (494)
T ss_dssp SE-EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTT-STTCCEEEEEEETTTTEEE
T ss_pred ee-eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcc-cccCceeEEEecccCCEEE
Confidence 64 333334333211 12222322 257778777432 0001110 0000 00011 1134567677788
Q ss_pred EEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeE
Q 017314 320 AGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVV 369 (373)
Q Consensus 320 sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i 369 (373)
.-+.-|.|.++|+.++.++..-+-...+|...+-+....-++....+|.|
T Consensus 275 viTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 275 LITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEE
T ss_pred EEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceE
Confidence 88899999999999999987766666677766666655556666666665
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.26 E-value=0.049 Score=47.11 Aligned_cols=227 Identities=9% Similarity=0.044 Sum_probs=110.7
Q ss_pred CCCCEEEEeeC----CCcEEEEeCCCCceeee--ccccccceEEEEEcCCCCEEEEEeC----C-----CcEEEEEcCCC
Q 017314 98 YNSARLISGGQ----DKSIKLWDTNTGSLSST--LYGCLGSVLDLAITHDNRSVIAASS----S-----NNLYVWDVNSG 162 (373)
Q Consensus 98 ~~~~~l~s~s~----D~~v~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~s~----d-----~~i~iwd~~~~ 162 (373)
.++..++.||. -..+.+||..+++-... +....... +++. .++..++.|+. + ..+.+||+.+.
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 35566666663 24688899877643221 11111111 1222 25566666665 2 46888998876
Q ss_pred eeEEE--eecCCCcEEEEEEeeCCCCEEEEEeCC-----CcEEEEEccCCeeeeEEeecCc--eeEEEEccCCCEEEEEe
Q 017314 163 RVRHT--LTGHTDKVCAVDVSKISSRHVVSAAYD-----RTLKVWDLHKGYCVNTIIFHSN--CNALAFSMDGQTIFSGH 233 (373)
Q Consensus 163 ~~~~~--~~~h~~~v~~~~~~~~~~~~~~s~s~D-----~~i~vwd~~~~~~~~~~~~~~~--~~~~~~~~~g~~l~sg~ 233 (373)
+-... +......-..+.+ ++..++.|+.+ ..+.+||..+......-..+.. ..+++. .++..++.|+
T Consensus 101 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG 176 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGVI---DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAV-LNRLLYAVGG 176 (308)
T ss_dssp EEEECCCCSSCCBTCEEEEE---TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECC
T ss_pred eEeECCCCCcCccccEEEEE---CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEE-ECCEEEEEeC
Confidence 53221 1111111111211 45566666543 4577888877653322111111 112222 2566666776
Q ss_pred CC-----CcEEEEECCCCeeeEEEecc-cccceEEEEEcCCCCEEEEeeCC-----CeEEEEEccccceeeeeeecCCee
Q 017314 234 ID-----GNLRLWDIQTGKLLSEVAAH-SLAAVTSISLSRSGNIILTSGRD-----NLHNLFDIRSLEVCGSLRATGNRV 302 (373)
Q Consensus 234 ~d-----g~i~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~ 302 (373)
.+ ..+.+||+.+.+-...-... .......+.+ ++++++.||.+ ..+.+||+.+.+-...-.....+.
T Consensus 177 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~ 254 (308)
T 1zgk_A 177 FDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRS 254 (308)
T ss_dssp BCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCB
T ss_pred CCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCcc
Confidence 54 45889998876533211111 1111222333 56777777764 457888887643321111111111
Q ss_pred ecCeeeeEECCCCcEEEEEeCC-----CcEEEEEccCce
Q 017314 303 ASNWSRSCISPDESYVAAGSAD-----GSVYIWSISKAD 336 (373)
Q Consensus 303 ~~~~~~~~~s~~~~~l~sgs~D-----g~i~iwd~~~~~ 336 (373)
.. .+...++++++.|+.+ ..+.+||+.+.+
T Consensus 255 --~~--~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 255 --AL--GITVHQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp --SC--EEEEETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred --ce--EEEEECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 11 1122367777777754 357788887654
No 316
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.20 E-value=0.11 Score=46.06 Aligned_cols=192 Identities=15% Similarity=0.151 Sum_probs=105.8
Q ss_pred ecCccCcEEEEEEcCCCCEEEEee------------CCCcEEEEeCCCC--cee-eeccc-----cccceEEEEEcC--C
Q 017314 84 INAHEGGCASILFEYNSARLISGG------------QDKSIKLWDTNTG--SLS-STLYG-----CLGSVLDLAITH--D 141 (373)
Q Consensus 84 ~~~h~~~v~~~~~~~~~~~l~s~s------------~D~~v~iwd~~~~--~~~-~~~~~-----~~~~v~~~~~~~--~ 141 (373)
+++-..+.-.+...++|..+++++ .+|.|.++|.++. +.. ..+.+ ..-..+.+.+.+ +
T Consensus 45 i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 45 VKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD 124 (355)
T ss_dssp CTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT
T ss_pred eCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC
Confidence 344233455667788765444442 6899999998742 221 11222 123456666655 4
Q ss_pred CC-EEEEE-eC--CCcEEEEEcCCC--e--eEEEeecCC-CcEEEEEEeeCCCCEEEEEeC---C------------CcE
Q 017314 142 NR-SVIAA-SS--SNNLYVWDVNSG--R--VRHTLTGHT-DKVCAVDVSKISSRHVVSAAY---D------------RTL 197 (373)
Q Consensus 142 ~~-~l~s~-s~--d~~i~iwd~~~~--~--~~~~~~~h~-~~v~~~~~~~~~~~~~~s~s~---D------------~~i 197 (373)
+. +|+.+ .. +.+|.+|++..+ . .+.++.+.. .....+.+.+ ++.+.++... | ..=
T Consensus 125 g~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g 203 (355)
T 3sre_A 125 NTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWS 203 (355)
T ss_dssp CCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCE
T ss_pred CcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCcc
Confidence 54 44444 33 457888776543 2 233444322 3356777776 4555555431 1 122
Q ss_pred EEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEe-CCCcEEEEECCC-Ceee--EEEecccccceEEEEEcC-CCCEE
Q 017314 198 KVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGH-IDGNLRLWDIQT-GKLL--SEVAAHSLAAVTSISLSR-SGNII 272 (373)
Q Consensus 198 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~-~dg~i~iwd~~~-~~~~--~~~~~~~~~~v~~~~~~~-~~~~l 272 (373)
++|-+..+........-...|.++|+||++.++.+. ..+.|..||+.. +... ..+. .......+++++ +|++.
T Consensus 204 ~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~--~~g~PDGi~vD~e~G~lw 281 (355)
T 3sre_A 204 FVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS--FDTLVDNISVDPVTGDLW 281 (355)
T ss_dssp EEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE--CSSEEEEEEECTTTCCEE
T ss_pred EEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe--CCCCCceEEEeCCCCcEE
Confidence 344333333222222234578999999999887654 578899999863 3321 2231 125677889999 59888
Q ss_pred EEeeCC
Q 017314 273 LTSGRD 278 (373)
Q Consensus 273 ~s~~~d 278 (373)
+++.-+
T Consensus 282 va~~~~ 287 (355)
T 3sre_A 282 VGCHPN 287 (355)
T ss_dssp EEEESC
T ss_pred EEecCC
Confidence 776543
No 317
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.12 E-value=0.019 Score=50.39 Aligned_cols=113 Identities=12% Similarity=0.234 Sum_probs=73.6
Q ss_pred CEEEEEeCCCcEEEEEcCCCeeEEEeecC-CCcEEEEEEee-CCCCEEEEE--eCCCcEEEEEccCCeeeeEEeecCcee
Q 017314 143 RSVIAASSSNNLYVWDVNSGRVRHTLTGH-TDKVCAVDVSK-ISSRHVVSA--AYDRTLKVWDLHKGYCVNTIIFHSNCN 218 (373)
Q Consensus 143 ~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~~-~~~~~~~s~--s~D~~i~vwd~~~~~~~~~~~~~~~~~ 218 (373)
..++.++.||.|.-.|..+|+.+.++... ..++....-.. .....++.+ +.||.|..+|..+|.....+.....+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46889999999999999999998888654 12222211000 012234333 589999999998875443332221110
Q ss_pred --EEEEc-----------cCCCEEEEEeCCCcEEEEECCCCeeeEEEecc
Q 017314 219 --ALAFS-----------MDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAH 255 (373)
Q Consensus 219 --~~~~~-----------~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 255 (373)
-+... ..+..+++|+.+|.+...|+++|+.+.++...
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 01111 14567899999999999999999999888654
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.11 E-value=0.11 Score=45.08 Aligned_cols=224 Identities=9% Similarity=0.047 Sum_probs=108.1
Q ss_pred EEEeeCCCcEEEEeCCCCceee-eccccccceEEEEEcCCCCEEEEEeC-----C------CcEEEEEcCCCeeEEEeec
Q 017314 103 LISGGQDKSIKLWDTNTGSLSS-TLYGCLGSVLDLAITHDNRSVIAASS-----S------NNLYVWDVNSGRVRHTLTG 170 (373)
Q Consensus 103 l~s~s~D~~v~iwd~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~s~s~-----d------~~i~iwd~~~~~~~~~~~~ 170 (373)
++.|+ ..+.+||..+++-.. .+..........+...++..++.|+. . ..+.+||+.+.+-.. +..
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~~ 84 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MPP 84 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CCC
T ss_pred EEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CCC
Confidence 44455 578889988875322 11111112222334457777777773 1 127788988765322 111
Q ss_pred CCCcE--EEEEEeeCCCCEEEEEeCC--------CcEEEEEccCCeeeeEEeecC-ceeEEEEccCCCEEEEEeC-C---
Q 017314 171 HTDKV--CAVDVSKISSRHVVSAAYD--------RTLKVWDLHKGYCVNTIIFHS-NCNALAFSMDGQTIFSGHI-D--- 235 (373)
Q Consensus 171 h~~~v--~~~~~~~~~~~~~~s~s~D--------~~i~vwd~~~~~~~~~~~~~~-~~~~~~~~~~g~~l~sg~~-d--- 235 (373)
-..+- .++.. .++..++.|+.+ ..+.++|..++.-...-..+. .....+...+++.++.|+. +
T Consensus 85 ~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 85 LPSPRCLFGLGE--ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRK 162 (315)
T ss_dssp BSSCEESCEEEE--ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSC
T ss_pred CCcchhceeEEE--ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCc
Confidence 00111 11111 145566666632 458888988765322111111 1111122246666667765 2
Q ss_pred --CcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCCC-----eEEEEEccccceeeeeeecCCeeecCee
Q 017314 236 --GNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRDN-----LHNLFDIRSLEVCGSLRATGNRVASNWS 307 (373)
Q Consensus 236 --g~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 307 (373)
..+.+||+.+.+-...-.... .....++.+ ++++++.||.++ .+.+||+.+.+-...-.....+..
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~---- 236 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSS---- 236 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBS----
T ss_pred ccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccc----
Confidence 368999998765332111111 111222222 567777777654 467788765432211111111111
Q ss_pred eeEECCCCcEEEEEeCCC--------------cEEEEEccCceE
Q 017314 308 RSCISPDESYVAAGSADG--------------SVYIWSISKADI 337 (373)
Q Consensus 308 ~~~~s~~~~~l~sgs~Dg--------------~i~iwd~~~~~~ 337 (373)
..+...++++++.|+.++ .|.+||+.+.+-
T Consensus 237 ~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 237 LSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp CEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred eeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 112223667777776532 367788776543
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.11 E-value=0.11 Score=44.59 Aligned_cols=204 Identities=14% Similarity=0.194 Sum_probs=97.7
Q ss_pred CcEEEEEcCCCeeEEE--eecCCCcEEEEEEeeCCCCEEEEEeCC-----CcEEEEEccCCeeeeEEeecCc--eeEEEE
Q 017314 152 NNLYVWDVNSGRVRHT--LTGHTDKVCAVDVSKISSRHVVSAAYD-----RTLKVWDLHKGYCVNTIIFHSN--CNALAF 222 (373)
Q Consensus 152 ~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~s~s~D-----~~i~vwd~~~~~~~~~~~~~~~--~~~~~~ 222 (373)
..+.+||+.+.+-... +...... .++.. .++..++.|+.+ ..+.+||..+......-..+.. ..+++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~- 105 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCR-AGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAA- 105 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBS-CEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCccccc-ceEEE--ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEE-
Confidence 3577888877653221 1111111 11111 145566777654 3578889887653322111111 11222
Q ss_pred ccCCCEEEEEeCCC-----cEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCC-------CeEEEEEcccc
Q 017314 223 SMDGQTIFSGHIDG-----NLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRD-------NLHNLFDIRSL 289 (373)
Q Consensus 223 ~~~g~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d-------~~i~~~d~~~~ 289 (373)
..++..++.|+.++ .+.+||+.+.+-...-.... .....++.+ ++++++.||.+ ..+.+||+.+.
T Consensus 106 ~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~ 183 (302)
T 2xn4_A 106 VLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTN 183 (302)
T ss_dssp EETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTT
T ss_pred EECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCC
Confidence 23666667777654 47789988765432211111 111122222 56666766643 34778887754
Q ss_pred ceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCC-----cEEEEEccCceEEEE--eccCCccEEEEEEcCCCCcEEE
Q 017314 290 EVCGSLRATGNRVASNWSRSCISPDESYVAAGSADG-----SVYIWSISKADIVRT--LKEHTAPVLSCSWSGLGKPLAS 362 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg-----~i~iwd~~~~~~~~~--l~~h~~~V~~~~~s~~g~~l~s 362 (373)
.-...-....... . ..+...++.+++.|+.++ .+.+||+.+.+-... +......-..+.+ +++.++.
T Consensus 184 ~W~~~~~~p~~r~--~--~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~ 257 (302)
T 2xn4_A 184 EWTYIAEMSTRRS--G--AGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVV 257 (302)
T ss_dssp EEEEECCCSSCCB--S--CEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEE
T ss_pred cEEECCCCccccc--c--ccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEE
Confidence 3221111111111 1 112223677778887653 688999887643322 2111111112222 5677777
Q ss_pred EeCCC
Q 017314 363 ADKNG 367 (373)
Q Consensus 363 ~s~dg 367 (373)
|+.++
T Consensus 258 GG~~~ 262 (302)
T 2xn4_A 258 GGDDG 262 (302)
T ss_dssp CCBCS
T ss_pred CCcCC
Confidence 77654
No 320
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.90 E-value=0.13 Score=44.18 Aligned_cols=212 Identities=10% Similarity=0.052 Sum_probs=103.9
Q ss_pred EEEEEeC--CCcEEEEEcCCCeeEEE--eecCCCcEEEEEEeeCCCCEEEEEeCC----CcEEEEEccCCeeeeEEeecC
Q 017314 144 SVIAASS--SNNLYVWDVNSGRVRHT--LTGHTDKVCAVDVSKISSRHVVSAAYD----RTLKVWDLHKGYCVNTIIFHS 215 (373)
Q Consensus 144 ~l~s~s~--d~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~s~s~D----~~i~vwd~~~~~~~~~~~~~~ 215 (373)
.++.|+. ...+.+||+.+++-... +......-..+ . .++..++.|+.+ ..+.++|..++.....-..+.
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~-~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACV-F--WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEE-E--ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEE-E--ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 3445554 35788999887653221 11111111112 1 145566777755 668889988775433222221
Q ss_pred c-eeEEEEccCCCEEEEEeCC------CcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeC---------C
Q 017314 216 N-CNALAFSMDGQTIFSGHID------GNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGR---------D 278 (373)
Q Consensus 216 ~-~~~~~~~~~g~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~---------d 278 (373)
. ....+...++..++.|+.+ ..+.+||+.+.+-...-.... .....++.+ ++++++.|+. -
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEEC
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCccccc
Confidence 1 1111122366666777765 458899998875432211111 111122222 5666666654 3
Q ss_pred CeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCC-----CcEEEEEccCceEEE--EeccCCccEEEE
Q 017314 279 NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSAD-----GSVYIWSISKADIVR--TLKEHTAPVLSC 351 (373)
Q Consensus 279 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~D-----g~i~iwd~~~~~~~~--~l~~h~~~V~~~ 351 (373)
+.+.+||+.+..-...-....... . ..+...++++++.|+.+ ..+.+||+.+.+-.. .+.........+
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~--~--~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 244 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARK--N--HGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCA 244 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCB--S--CEEEEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEE
T ss_pred ceEEEeCCCCCeEEECCCccchhh--c--ceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEE
Confidence 447788887653221111111111 1 11222367777777654 358899988764322 222111122233
Q ss_pred EEcCCCCcEEEEeCC
Q 017314 352 SWSGLGKPLASADKN 366 (373)
Q Consensus 352 ~~s~~g~~l~s~s~d 366 (373)
.+ +++.++.|+.+
T Consensus 245 ~~--~~~i~v~GG~~ 257 (306)
T 3ii7_A 245 AV--GSIVYVLAGFQ 257 (306)
T ss_dssp EE--TTEEEEEECBC
T ss_pred EE--CCEEEEEeCcC
Confidence 33 56777777755
No 321
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.84 E-value=0.053 Score=44.14 Aligned_cols=145 Identities=10% Similarity=0.037 Sum_probs=80.9
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEECCCCee------eEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEcccc
Q 017314 216 NCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKL------LSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSL 289 (373)
Q Consensus 216 ~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~ 289 (373)
....++|+|+|.+.+. .+|.+.-.+..+.+. -..+-...-....++.|+|+|.+.++ .|+.+.-++-.+.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 4668999999985544 778777777655221 11121111112478999999998888 5577765554221
Q ss_pred ceeeeeeecCCeee----cCeeeeEECCCCcEEEEEeCCCcEEEEEccCce------EEEEec-cCCccEEEEEEcCCCC
Q 017314 290 EVCGSLRATGNRVA----SNWSRSCISPDESYVAAGSADGSVYIWSISKAD------IVRTLK-EHTAPVLSCSWSGLGK 358 (373)
Q Consensus 290 ~~~~~~~~~~~~~~----~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~------~~~~l~-~h~~~V~~~~~s~~g~ 358 (373)
.. .........+. ..+..+.+.|+|.+.+.. ||.++-+....+. ....+. +....-.-+.|.|+|.
T Consensus 118 ~~-~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 118 DT-DNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp TT-CCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CC-CceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 11 11111111111 234567789999888877 7776544443221 111121 2222344577999987
Q ss_pred cEEEEeCCCeE
Q 017314 359 PLASADKNGVV 369 (373)
Q Consensus 359 ~l~s~s~dg~i 369 (373)
..+.. +|.+
T Consensus 195 l~~v~--~g~~ 203 (236)
T 1tl2_A 195 LFGVQ--GGKF 203 (236)
T ss_dssp EEEEE--TTEE
T ss_pred EEEEe--CCeE
Confidence 66555 7754
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.66 E-value=0.14 Score=47.13 Aligned_cols=53 Identities=13% Similarity=0.233 Sum_probs=34.1
Q ss_pred ceeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeE--EEec-----ccccceEEEEEcCC
Q 017314 216 NCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLS--EVAA-----HSLAAVTSISLSRS 268 (373)
Q Consensus 216 ~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~--~~~~-----~~~~~v~~~~~~~~ 268 (373)
....++|.|+|+++++-...+.|++++..+++... .+.. ........|+|+|+
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 45789999999977665444579888876554322 2211 11245678999995
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.65 E-value=0.16 Score=43.77 Aligned_cols=215 Identities=13% Similarity=0.050 Sum_probs=101.1
Q ss_pred CCCEEEEEeC----CCcEEEEEcCCCeeEEE--eecCCCcEEEEEEeeCCCCEEEEEeC----C-----CcEEEEEccCC
Q 017314 141 DNRSVIAASS----SNNLYVWDVNSGRVRHT--LTGHTDKVCAVDVSKISSRHVVSAAY----D-----RTLKVWDLHKG 205 (373)
Q Consensus 141 ~~~~l~s~s~----d~~i~iwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~s~s~----D-----~~i~vwd~~~~ 205 (373)
++..++.|+. -..+.+||+.+.+-... +...... .++.. .++..++.|+. + ..+.++|..+.
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~ 100 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSG-LAGCV--VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTN 100 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE--ETTEEEEECCEEEETTEEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCccccc-ceEEE--ECCEEEEECCCcCCCCCCeecceEEEECCCCC
Confidence 3444444442 13577888876653221 1110011 11111 13455666665 2 46788888776
Q ss_pred eeeeEEeecCc--eeEEEEccCCCEEEEEeCC-----CcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeC
Q 017314 206 YCVNTIIFHSN--CNALAFSMDGQTIFSGHID-----GNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGR 277 (373)
Q Consensus 206 ~~~~~~~~~~~--~~~~~~~~~g~~l~sg~~d-----g~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~ 277 (373)
.....-..+.. ..+++. .++..++.|+.+ ..+.+||+.+.+-...-.... .....++.+ ++.+++.||.
T Consensus 101 ~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 177 (308)
T 1zgk_A 101 QWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGF 177 (308)
T ss_dssp EEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCB
T ss_pred eEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCC
Confidence 53221111111 112222 266666666643 358899998765332111111 111222223 5677777765
Q ss_pred C-----CeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCC-----CcEEEEEccCceEEEE--eccCC
Q 017314 278 D-----NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSAD-----GSVYIWSISKADIVRT--LKEHT 345 (373)
Q Consensus 278 d-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~D-----g~i~iwd~~~~~~~~~--l~~h~ 345 (373)
+ +.+.+||+.+.+-...-....... .. .+..-++.+++.|+.+ ..+.+||+.+.+-... +....
T Consensus 178 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~--~~--~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r 253 (308)
T 1zgk_A 178 DGTNRLNSAECYYPERNEWRMITAMNTIRS--GA--GVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRR 253 (308)
T ss_dssp CSSCBCCCEEEEETTTTEEEECCCCSSCCB--SC--EEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCC
T ss_pred CCCCcCceEEEEeCCCCeEeeCCCCCCccc--cc--eEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCc
Confidence 4 357788876543321111011110 11 1122367777777765 4699999887654322 21111
Q ss_pred ccEEEEEEcCCCCcEEEEeCCC
Q 017314 346 APVLSCSWSGLGKPLASADKNG 367 (373)
Q Consensus 346 ~~V~~~~~s~~g~~l~s~s~dg 367 (373)
.....+.+ +++.++.|+.++
T Consensus 254 ~~~~~~~~--~~~i~v~GG~~~ 273 (308)
T 1zgk_A 254 SALGITVH--QGRIYVLGGYDG 273 (308)
T ss_dssp BSCEEEEE--TTEEEEECCBCS
T ss_pred cceEEEEE--CCEEEEEcCcCC
Confidence 11122222 567777777553
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.61 E-value=0.3 Score=42.17 Aligned_cols=204 Identities=13% Similarity=0.104 Sum_probs=97.6
Q ss_pred CcEEEEEcCCCeeEE-EeecCCCcE-EEEEEeeCCCCEEEEEeC----C-------CcEEEEEccCCeeeeEEeecCc-e
Q 017314 152 NNLYVWDVNSGRVRH-TLTGHTDKV-CAVDVSKISSRHVVSAAY----D-------RTLKVWDLHKGYCVNTIIFHSN-C 217 (373)
Q Consensus 152 ~~i~iwd~~~~~~~~-~~~~h~~~v-~~~~~~~~~~~~~~s~s~----D-------~~i~vwd~~~~~~~~~~~~~~~-~ 217 (373)
..+.+||+.+++-.. .+....... .++. ..++..++.|+. + ..+..||..++.....-..+.. .
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNHVSLV--TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSEEEEE--CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEE
T ss_pred CceEEECCCCCeEecCCCCCCCCccceEEE--EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchh
Confidence 578899998876332 111111111 1222 235667777773 1 1266788877654221111111 1
Q ss_pred -eEEEEccCCCEEEEEeCC--------CcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeC-C-----CeE
Q 017314 218 -NALAFSMDGQTIFSGHID--------GNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGR-D-----NLH 281 (373)
Q Consensus 218 -~~~~~~~~g~~l~sg~~d--------g~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~-d-----~~i 281 (373)
.+++. .++..++.|+.+ ..+.+||+.+.+-...-.... .....++. -++++++.||. + +.+
T Consensus 91 ~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 167 (315)
T 4asc_A 91 LFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNKM 167 (315)
T ss_dssp SCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCCE
T ss_pred ceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccceE
Confidence 11222 256666666632 458899998765322111111 11112222 35567777776 2 357
Q ss_pred EEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCC-----cEEEEEccCceEEEE--eccCCccEEEEEEc
Q 017314 282 NLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADG-----SVYIWSISKADIVRT--LKEHTAPVLSCSWS 354 (373)
Q Consensus 282 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg-----~i~iwd~~~~~~~~~--l~~h~~~V~~~~~s 354 (373)
.+||..+.+-...-.....+. ...+...++++++.|+.++ .+.+||+.+.+-... +.........+.+
T Consensus 168 ~~yd~~~~~W~~~~~~p~~r~----~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 242 (315)
T 4asc_A 168 CVYDPKKFEWKELAPMQTARS----LFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL- 242 (315)
T ss_dssp EEEETTTTEEEECCCCSSCCB----SCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred EEEeCCCCeEEECCCCCCchh----ceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE-
Confidence 788877543221111111111 1112223677777777654 488889877643322 2111111122333
Q ss_pred CCCCcEEEEeCC
Q 017314 355 GLGKPLASADKN 366 (373)
Q Consensus 355 ~~g~~l~s~s~d 366 (373)
+++.++.|+.+
T Consensus 243 -~~~l~v~GG~~ 253 (315)
T 4asc_A 243 -VGTLYAIGGFA 253 (315)
T ss_dssp -TTEEEEEEEEE
T ss_pred -CCEEEEECCcc
Confidence 56777777764
No 325
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.61 E-value=0.15 Score=45.89 Aligned_cols=143 Identities=19% Similarity=0.237 Sum_probs=94.1
Q ss_pred cCCCCEEEEeeCCCcEEEEeCCCCceeeecccc----ccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCe---------
Q 017314 97 EYNSARLISGGQDKSIKLWDTNTGSLSSTLYGC----LGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR--------- 163 (373)
Q Consensus 97 ~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~--------- 163 (373)
..+|+.++.+- ++.||.-++..+...+.+... -..+..+..+|+|++|+.. .+.+|.|-.+..+.
T Consensus 29 ~~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 29 SQNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLF-NDNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEE-CSSEEEEEECCTTCSCCCCHHHH
T ss_pred EcCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEe-cCCeEEEEEecCccccCcccccc
Confidence 34667776654 478887787644333333221 2256779999999987766 56688888887321
Q ss_pred ---eEEEeec------CCCcEEEEEEeeCC--CCEEEEEeCCCcEEEEEccCCeeee-EEe-----ec-----CceeEEE
Q 017314 164 ---VRHTLTG------HTDKVCAVDVSKIS--SRHVVSAAYDRTLKVWDLHKGYCVN-TII-----FH-----SNCNALA 221 (373)
Q Consensus 164 ---~~~~~~~------h~~~v~~~~~~~~~--~~~~~s~s~D~~i~vwd~~~~~~~~-~~~-----~~-----~~~~~~~ 221 (373)
..+++.- ...+|..+.|+|.. +..+++--.|++||+||+....... .+. +. ..+.+++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEE
Confidence 1122321 24679999999864 4489999999999999997632111 111 11 3578899
Q ss_pred EccCCCEEEEEe--CCCcEEEE
Q 017314 222 FSMDGQTIFSGH--IDGNLRLW 241 (373)
Q Consensus 222 ~~~~g~~l~sg~--~dg~i~iw 241 (373)
|.++|-.|+..+ ..|.|.-.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEEEE
T ss_pred EcCCCcEEEEEecCCCCCEEEE
Confidence 999988888755 77888654
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.49 E-value=0.41 Score=42.27 Aligned_cols=226 Identities=11% Similarity=0.074 Sum_probs=113.5
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeec-------cccccceEEEEEcCC---CCEEEEEe-C-------
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTL-------YGCLGSVLDLAITHD---NRSVIAAS-S------- 150 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~-------~~~~~~v~~~~~~~~---~~~l~s~s-~------- 150 (373)
..-+.++|.|+|+.|+.+...+.|++++.. +.....+ .........++++|+ +..|+.+. .
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCc
Confidence 345789999999834445678999999853 3321111 112345688999996 55555443 2
Q ss_pred CCcEEEEEcCCC-----eeEEEeec------CCCcEEEEEEeeCCCCEEEEEeC-------------CCcEEEEEccCCe
Q 017314 151 SNNLYVWDVNSG-----RVRHTLTG------HTDKVCAVDVSKISSRHVVSAAY-------------DRTLKVWDLHKGY 206 (373)
Q Consensus 151 d~~i~iwd~~~~-----~~~~~~~~------h~~~v~~~~~~~~~~~~~~s~s~-------------D~~i~vwd~~~~~ 206 (373)
...|..|++..+ .....+.. .......+.|.| ++.+.++.+. .+.|.-.|.....
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~ 175 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEI 175 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCC
Confidence 235666666432 11111111 011134577877 4544454332 2456555654320
Q ss_pred ------------eeeEE-eecCceeEEEEcc-CCCEEEEEeCC--CcEEEEECCCCee----------------------
Q 017314 207 ------------CVNTI-IFHSNCNALAFSM-DGQTIFSGHID--GNLRLWDIQTGKL---------------------- 248 (373)
Q Consensus 207 ------------~~~~~-~~~~~~~~~~~~~-~g~~l~sg~~d--g~i~iwd~~~~~~---------------------- 248 (373)
....+ ..+.+...++|+| +|. |+++... +.=+|.-+..+..
T Consensus 176 p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~-l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~ 254 (353)
T 2g8s_A 176 PDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNA-LWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKG 254 (353)
T ss_dssp CTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTE-EEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCB
T ss_pred CCCCCCcCCCCCCccEEEEcCcCccceEEECCCCC-EEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccC
Confidence 11111 2344578899999 555 4443322 1112222221111
Q ss_pred ---------eEEEecccccceEEEEEcC-------CCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEEC
Q 017314 249 ---------LSEVAAHSLAAVTSISLSR-------SGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCIS 312 (373)
Q Consensus 249 ---------~~~~~~~~~~~v~~~~~~~-------~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s 312 (373)
+..+..+ .....+.|.+ ++.++++.-..+.|...++............. ........+++.
T Consensus 255 ~~~~~~~~P~~~~~~~--~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~rp~~v~~~ 331 (353)
T 2g8s_A 255 EIVAGTEQPVFYWKDS--PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILT-DRGQRIRDVRTG 331 (353)
T ss_dssp SSCTTSCCCSEEESSC--CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESG-GGCCCEEEEEEC
T ss_pred CCCCCccCCeEEeCCC--cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEccc-CCCCceeEEEEC
Confidence 1111111 2466777754 46777777777777777776543322211100 011122346788
Q ss_pred CCCcEEEE
Q 017314 313 PDESYVAA 320 (373)
Q Consensus 313 ~~~~~l~s 320 (373)
|||.+.++
T Consensus 332 pdG~lyv~ 339 (353)
T 2g8s_A 332 PDGYLYVL 339 (353)
T ss_dssp TTSCEEEE
T ss_pred CCCcEEEE
Confidence 99876654
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.40 E-value=0.38 Score=42.31 Aligned_cols=231 Identities=10% Similarity=0.047 Sum_probs=107.4
Q ss_pred CCCEEEEeeCC-CcEEEEeCCC--Cc--eeeecc-ccccceEEEEEcCCCCEEEEEeC-C---------CcEEEEEcCCC
Q 017314 99 NSARLISGGQD-KSIKLWDTNT--GS--LSSTLY-GCLGSVLDLAITHDNRSVIAASS-S---------NNLYVWDVNSG 162 (373)
Q Consensus 99 ~~~~l~s~s~D-~~v~iwd~~~--~~--~~~~~~-~~~~~v~~~~~~~~~~~l~s~s~-d---------~~i~iwd~~~~ 162 (373)
++..++.||.+ ..+.++|+.+ .+ .+..+. ........+.+ ++..++.|+. + ..+.+||+.+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666777654 5688889864 22 121222 11111122222 5666666665 2 46889999876
Q ss_pred eeEEEeecC-CCc-EEEEEEeeCCCCEEEEEeCC---------------------------------------CcEEEEE
Q 017314 163 RVRHTLTGH-TDK-VCAVDVSKISSRHVVSAAYD---------------------------------------RTLKVWD 201 (373)
Q Consensus 163 ~~~~~~~~h-~~~-v~~~~~~~~~~~~~~s~s~D---------------------------------------~~i~vwd 201 (373)
+-...-.-. ... -.++.. .++..++.|+.+ ..+.+||
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEE--ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred cEEECCCCCCcccccceEEE--ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 532211101 111 111222 246677778765 5788899
Q ss_pred ccCCeeeeEEeecC--ce-eEEEEccCCCEEEEEeC------CCcEEEEEC--CCCeeeEEEecc-cccceEEEEEcCCC
Q 017314 202 LHKGYCVNTIIFHS--NC-NALAFSMDGQTIFSGHI------DGNLRLWDI--QTGKLLSEVAAH-SLAAVTSISLSRSG 269 (373)
Q Consensus 202 ~~~~~~~~~~~~~~--~~-~~~~~~~~g~~l~sg~~------dg~i~iwd~--~~~~~~~~~~~~-~~~~v~~~~~~~~~ 269 (373)
..+......-.... .. .+++. .++..++.|+. ...+..||+ .+.+-...-... ........+...++
T Consensus 175 ~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~ 253 (357)
T 2uvk_A 175 PSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISND 253 (357)
T ss_dssp TTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETT
T ss_pred CCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEEECC
Confidence 88775433322221 12 22322 25556666653 335777877 443322111100 00111111122356
Q ss_pred CEEEEeeCC----------------------CeEEEEEccccc--eeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCC
Q 017314 270 NIILTSGRD----------------------NLHNLFDIRSLE--VCGSLRATGNRVASNWSRSCISPDESYVAAGSADG 325 (373)
Q Consensus 270 ~~l~s~~~d----------------------~~i~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg 325 (373)
++++.||.+ ..+.+||+.+.+ .+..+.. .+.. ..++..+++.++.|+.++
T Consensus 254 ~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~--~r~~----~~~~~~~~~i~v~GG~~~ 327 (357)
T 2uvk_A 254 SLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQ--GRAY----GVSLPWNNSLLIIGGETA 327 (357)
T ss_dssp EEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSS--CCBS----SEEEEETTEEEEEEEECG
T ss_pred EEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCC--Cccc----ceeEEeCCEEEEEeeeCC
Confidence 677777642 246678876543 2222211 1111 122334777778887553
Q ss_pred ------cEEEEEccCceEEEE
Q 017314 326 ------SVYIWSISKADIVRT 340 (373)
Q Consensus 326 ------~i~iwd~~~~~~~~~ 340 (373)
.|.++++.+++.+..
T Consensus 328 ~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 328 GGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp GGCEEEEEEEEEC-CCSCEEE
T ss_pred CCCEeeeEEEEEEcCcEeEee
Confidence 355667777666544
No 328
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.37 E-value=0.31 Score=50.63 Aligned_cols=252 Identities=11% Similarity=0.128 Sum_probs=128.0
Q ss_pred CCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCE
Q 017314 108 QDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRH 187 (373)
Q Consensus 108 ~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 187 (373)
...+|.|-|+.++..+..-. -..-+.-.+|..+.++-- ...++.|+|+++.+.+..+.-. .+|.--.| .+.+.
T Consensus 46 ~~~~vvIidl~~~~~~~rrp---i~AdsAIMnP~~~iiALr-ag~~lQiFnl~~k~klks~~~~-e~VvfWkW--is~~~ 118 (1630)
T 1xi4_A 46 EQAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALK-AGKTLQIFNIEMKSKMKAHTMT-DDVTFWKW--ISLNT 118 (1630)
T ss_pred CCceEEEEECCCCCCccccc---ccchhhccCCCcceEEEe-cCCeEEEeehHHhhhhcccccC-CCceEEEe--cCCCe
Confidence 34478899988765432111 111122345665555444 3789999999887766555433 34443344 34444
Q ss_pred EEEEeCCCcEEEEEccCC-eeeeEEeec-----CceeEEEEccCCCEEEE-E------eCCCcEEEEECCCCeeeEEEec
Q 017314 188 VVSAAYDRTLKVWDLHKG-YCVNTIIFH-----SNCNALAFSMDGQTIFS-G------HIDGNLRLWDIQTGKLLSEVAA 254 (373)
Q Consensus 188 ~~s~s~D~~i~vwd~~~~-~~~~~~~~~-----~~~~~~~~~~~g~~l~s-g------~~dg~i~iwd~~~~~~~~~~~~ 254 (373)
++-- .+..|..|++... .+.+.+..| ..+.....+++.++++. | .-.|.+.+|....+. .+.+.+
T Consensus 119 l~lV-T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~ieg 196 (1630)
T 1xi4_A 119 VALV-TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEG 196 (1630)
T ss_pred eEEE-cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhH
Confidence 4322 2557999999642 232222222 23455667788888763 2 235788999886542 233444
Q ss_pred ccccceEEEEEc--CC-CCEEEEee---CCCeEEEEEcccc-ceeeeeeecCCee------ecCe-eeeEECCCCcEEEE
Q 017314 255 HSLAAVTSISLS--RS-GNIILTSG---RDNLHNLFDIRSL-EVCGSLRATGNRV------ASNW-SRSCISPDESYVAA 320 (373)
Q Consensus 255 ~~~~~v~~~~~~--~~-~~~l~s~~---~d~~i~~~d~~~~-~~~~~~~~~~~~~------~~~~-~~~~~s~~~~~l~s 320 (373)
|. .....+.+. +. .+++.-+. ..+.+.+.++... .....+......+ ...+ ....+++.-..+..
T Consensus 197 ha-~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~ 275 (1630)
T 1xi4_A 197 HA-ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFL 275 (1630)
T ss_pred hH-hhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEE
Confidence 43 222222221 11 11222111 1256777776432 1111111000000 0011 11335666667777
Q ss_pred EeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeE
Q 017314 321 GSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVV 369 (373)
Q Consensus 321 gs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i 369 (373)
-+.-|.|.++|+.++.++..-+-...+|...+-++...-++.....|.|
T Consensus 276 itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~v 324 (1630)
T 1xi4_A 276 ITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQV 324 (1630)
T ss_pred EecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceE
Confidence 8889999999999998765443344455444444333333333344443
No 329
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.33 E-value=0.56 Score=42.18 Aligned_cols=144 Identities=14% Similarity=0.175 Sum_probs=88.2
Q ss_pred cCCCEEEEEeCCCcEEEEECCCCeeeEEEecc---cccceEEEEEcCCCCEEEEeeCCCeEEEEEccccc-e--------
Q 017314 224 MDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAH---SLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLE-V-------- 291 (373)
Q Consensus 224 ~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~-~-------- 291 (373)
.+|..++.+- ++.||.=++......+.+... ....+..+..+|+|++|+..+.. .+.+..+.... .
T Consensus 30 ~n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccccc
Confidence 4566555543 467777777644444444433 22367889999999999988665 56676665211 0
Q ss_pred ---eeeeeecCCe--eecCeeeeEECCC---CcEEEEEeCCCcEEEEEccCc--eEEEEec---------cCCccEEEEE
Q 017314 292 ---CGSLRATGNR--VASNWSRSCISPD---ESYVAAGSADGSVYIWSISKA--DIVRTLK---------EHTAPVLSCS 352 (373)
Q Consensus 292 ---~~~~~~~~~~--~~~~~~~~~~s~~---~~~l~sgs~Dg~i~iwd~~~~--~~~~~l~---------~h~~~V~~~~ 352 (373)
...+...... ....+..+.++|- +..|++-..|+.||+||+... ++. .|+ .....|.+++
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~ 186 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLE 186 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEE
Confidence 1112111101 1223445667774 568999999999999999752 222 332 2235789999
Q ss_pred EcCCCCcEEE--EeCCCeEE
Q 017314 353 WSGLGKPLAS--ADKNGVVC 370 (373)
Q Consensus 353 ~s~~g~~l~s--~s~dg~i~ 370 (373)
|+++|-.|.. .+..|.|.
T Consensus 187 Fg~~~lTLYvl~~t~~GDIY 206 (452)
T 3pbp_A 187 FSKDGLTLYCLNTTEGGDIF 206 (452)
T ss_dssp ECTTSSCEEEEECTTSCEEE
T ss_pred EcCCCcEEEEEecCCCCCEE
Confidence 9998875555 45778775
No 330
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.28 E-value=0.52 Score=41.26 Aligned_cols=187 Identities=12% Similarity=0.123 Sum_probs=102.2
Q ss_pred CEEEEeeCCCcEEEEeCCCCceeeecccc-ccceEEEEE--cCCCCEEEEE--eCCCcEEEEEcCCCeeEEEeec----C
Q 017314 101 ARLISGGQDKSIKLWDTNTGSLSSTLYGC-LGSVLDLAI--THDNRSVIAA--SSSNNLYVWDVNSGRVRHTLTG----H 171 (373)
Q Consensus 101 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~~v~~~~~--~~~~~~l~s~--s~d~~i~iwd~~~~~~~~~~~~----h 171 (373)
..++.++.||.|.-.|.++|+..=.+... ..++....- .+.+..++.+ +.||.+..+|..+|.....+.. .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47888999999999999999876555432 122222110 0112234444 5899999999988855443321 1
Q ss_pred CCcEEEEEEee--------CCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCce--------eEEEEc-----cCCCEEE
Q 017314 172 TDKVCAVDVSK--------ISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNC--------NALAFS-----MDGQTIF 230 (373)
Q Consensus 172 ~~~v~~~~~~~--------~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~--------~~~~~~-----~~g~~l~ 230 (373)
..++.. .-.| .....+++|+.++.+.-.|+.+|+.+.++...... .|-... ..+..|+
T Consensus 91 ~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ 169 (339)
T 2be1_A 91 TSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIV 169 (339)
T ss_dssp TCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEE
T ss_pred cccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEE
Confidence 122221 0000 03457889999999999999999988777543210 011110 1245677
Q ss_pred EEeCCCcEEEEECCCCeeeEEEecccc--cce-----EEEEEcCCCCEEEEeeCCCeEEEEEccccce
Q 017314 231 SGHIDGNLRLWDIQTGKLLSEVAAHSL--AAV-----TSISLSRSGNIILTSGRDNLHNLFDIRSLEV 291 (373)
Q Consensus 231 sg~~dg~i~iwd~~~~~~~~~~~~~~~--~~v-----~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~ 291 (373)
.|..+..+.+.+ ++|+ +..+..... ..+ .+-..+.++.+ +.++.|+.+.-+|..++..
T Consensus 170 ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~ 234 (339)
T 2be1_A 170 IGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIA 234 (339)
T ss_dssp EEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCE
T ss_pred EecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcE
Confidence 777777777766 4554 222211000 000 00001123555 3467777777777766554
No 331
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.24 E-value=0.5 Score=40.76 Aligned_cols=225 Identities=14% Similarity=0.113 Sum_probs=106.6
Q ss_pred EEEeeCCCcEEEEeCCCCceeee-ccccccceEEEEEcCCCCEEEEEeC----CC-------cEEEEEcCCCeeEEE--e
Q 017314 103 LISGGQDKSIKLWDTNTGSLSST-LYGCLGSVLDLAITHDNRSVIAASS----SN-------NLYVWDVNSGRVRHT--L 168 (373)
Q Consensus 103 l~s~s~D~~v~iwd~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~s~s~----d~-------~i~iwd~~~~~~~~~--~ 168 (373)
++.|+. .+..||..+++-... +..........+...++..++.|+. ++ .+.+||+.+.+-... +
T Consensus 19 ~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 96 (318)
T 2woz_A 19 LLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL 96 (318)
T ss_dssp EEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCB
T ss_pred hhcccc--ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCC
Confidence 344443 378899887754321 1110111122234457777777773 11 277888877653221 1
Q ss_pred ecCCCcEEEEEEeeCCCCEEEEEeCC-------CcEEEEEccCCeeeeEEeecCc-eeEEEEccCCCEEEEEeC------
Q 017314 169 TGHTDKVCAVDVSKISSRHVVSAAYD-------RTLKVWDLHKGYCVNTIIFHSN-CNALAFSMDGQTIFSGHI------ 234 (373)
Q Consensus 169 ~~h~~~v~~~~~~~~~~~~~~s~s~D-------~~i~vwd~~~~~~~~~~~~~~~-~~~~~~~~~g~~l~sg~~------ 234 (373)
...... .++... ++..++.|+.+ ..+.++|..+..-...-..+.. ....+...++..++.|+.
T Consensus 97 p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~ 173 (318)
T 2woz_A 97 PSARCL-FGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKC 173 (318)
T ss_dssp SSCBCS-CEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCB
T ss_pred Cccccc-cceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCc
Confidence 111111 112111 45566777754 3467788877654322111111 111112246666666654
Q ss_pred CCcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCCC-----eEEEEEccccceeeeeeecCCeeecCeee
Q 017314 235 DGNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRDN-----LHNLFDIRSLEVCGSLRATGNRVASNWSR 308 (373)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 308 (373)
-..+.+||+.+.+-...-.... .....++.+ ++++++.||.++ .+.+||+.+.+-...-....... ..
T Consensus 174 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~----~~ 247 (318)
T 2woz_A 174 TNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERS----SI 247 (318)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCB----SC
T ss_pred cceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCccc----ce
Confidence 2358999998875432211111 111122222 566777776532 45678876543221111111111 11
Q ss_pred eEECCCCcEEEEEeCC--------------CcEEEEEccCceEE
Q 017314 309 SCISPDESYVAAGSAD--------------GSVYIWSISKADIV 338 (373)
Q Consensus 309 ~~~s~~~~~l~sgs~D--------------g~i~iwd~~~~~~~ 338 (373)
.+...++++++.|+.+ ..+.+||+.+.+-.
T Consensus 248 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 291 (318)
T 2woz_A 248 SLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWA 291 (318)
T ss_dssp EEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEE
T ss_pred EEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEeh
Confidence 1223367777777654 35788888775543
No 332
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.19 E-value=0.12 Score=42.10 Aligned_cols=137 Identities=9% Similarity=-0.016 Sum_probs=74.2
Q ss_pred CCEEEEEeCCCcEEEEECCCCe------eeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecC
Q 017314 226 GQTIFSGHIDGNLRLWDIQTGK------LLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATG 299 (373)
Q Consensus 226 g~~l~sg~~dg~i~iwd~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~ 299 (373)
...|++...| +++.=..+.+. ....+-...-..+..++|+|+|.+.+. .++.+.-.+..+... ..+....
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~-~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDN-DNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTT-CCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCc-ccccccc
Confidence 3445566666 55544444333 122222211236779999999987766 556554444332111 0111111
Q ss_pred Cee----ecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEE------EEe-ccCCccEEEEEEcCCCCcEEEEeCCCe
Q 017314 300 NRV----ASNWSRSCISPDESYVAAGSADGSVYIWSISKADIV------RTL-KEHTAPVLSCSWSGLGKPLASADKNGV 368 (373)
Q Consensus 300 ~~~----~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~------~~l-~~h~~~V~~~~~s~~g~~l~s~s~dg~ 368 (373)
..+ ...+..+.|.|+|.+.++ .||.|+-++..+...- ..+ .+-=..+..+.|.|+|..-+.. ||.
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ 155 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQ 155 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred cEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCc
Confidence 111 112456778999998888 5699988876432111 111 1111467899999999766655 776
Q ss_pred EE
Q 017314 369 VC 370 (373)
Q Consensus 369 i~ 370 (373)
+.
T Consensus 156 ly 157 (236)
T 1tl2_A 156 FY 157 (236)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.01 E-value=0.19 Score=44.29 Aligned_cols=93 Identities=11% Similarity=0.191 Sum_probs=42.9
Q ss_pred CCCEEEEEeCC-CcEEEEEcCC--Cee--EEEeecCCCcEEEEEEeeCCCCEEEEEeC-C---------CcEEEEEccCC
Q 017314 141 DNRSVIAASSS-NNLYVWDVNS--GRV--RHTLTGHTDKVCAVDVSKISSRHVVSAAY-D---------RTLKVWDLHKG 205 (373)
Q Consensus 141 ~~~~l~s~s~d-~~i~iwd~~~--~~~--~~~~~~h~~~v~~~~~~~~~~~~~~s~s~-D---------~~i~vwd~~~~ 205 (373)
++..++.|+.+ ..+.+||+.+ .+- +..+......-.++... ++..++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 44555555433 4688888864 221 11111000011112221 4556666665 2 46888898876
Q ss_pred eeeeEEeec-C-ceeEEEEccCCCEEEEEeCC
Q 017314 206 YCVNTIIFH-S-NCNALAFSMDGQTIFSGHID 235 (373)
Q Consensus 206 ~~~~~~~~~-~-~~~~~~~~~~g~~l~sg~~d 235 (373)
.-....... . .....+...++..++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTEEEEEECCC
T ss_pred cEEECCCCCCcccccceEEEECCEEEEEeCcC
Confidence 533211111 1 11121222567777778754
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.93 E-value=0.72 Score=39.77 Aligned_cols=203 Identities=13% Similarity=0.064 Sum_probs=93.9
Q ss_pred cEEEEEcCCCeeEE-EeecCCCc-EEEEEEeeCCCCEEEEEeC----CC-------cEEEEEccCCeeeeEEeecCc--e
Q 017314 153 NLYVWDVNSGRVRH-TLTGHTDK-VCAVDVSKISSRHVVSAAY----DR-------TLKVWDLHKGYCVNTIIFHSN--C 217 (373)
Q Consensus 153 ~i~iwd~~~~~~~~-~~~~h~~~-v~~~~~~~~~~~~~~s~s~----D~-------~i~vwd~~~~~~~~~~~~~~~--~ 217 (373)
.+.+||+.+++-.. .+...... -.++. ..++..++.|+. ++ .+..+|..++.....-..+.. .
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~--~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 102 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIV--TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCL 102 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEE--CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCS
T ss_pred ceEEECCCCCceecccCCccCCccceEEE--EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccc
Confidence 47889988876433 11111111 12222 235667777773 12 166788876653321111111 1
Q ss_pred eEEEEccCCCEEEEEeCC-------CcEEEEECCCCeeeEEEeccc-ccceEEEEEcCCCCEEEEeeCC------CeEEE
Q 017314 218 NALAFSMDGQTIFSGHID-------GNLRLWDIQTGKLLSEVAAHS-LAAVTSISLSRSGNIILTSGRD------NLHNL 283 (373)
Q Consensus 218 ~~~~~~~~g~~l~sg~~d-------g~i~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~~d------~~i~~ 283 (373)
.+++. .++..++.|+.+ ..+.+||+.+.+-...-.... .....++. .++++++.||.+ +.+.+
T Consensus 103 ~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~ 179 (318)
T 2woz_A 103 FGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFI 179 (318)
T ss_dssp CEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEE
T ss_pred cceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEE
Confidence 12222 256666677654 247888988765432211111 01111222 356676776642 34778
Q ss_pred EEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCC-----cEEEEEccCceEEE--EeccCCccEEEEEEcCC
Q 017314 284 FDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADG-----SVYIWSISKADIVR--TLKEHTAPVLSCSWSGL 356 (373)
Q Consensus 284 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg-----~i~iwd~~~~~~~~--~l~~h~~~V~~~~~s~~ 356 (373)
||+.+.+-...-....... .. .+...+++.++.|+.++ .+.+||+.+.+-.. .+.........+.+ +
T Consensus 180 yd~~~~~W~~~~~~p~~r~--~~--~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 253 (318)
T 2woz_A 180 YNPKKGDWKDLAPMKTPRS--MF--GVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--A 253 (318)
T ss_dssp EETTTTEEEEECCCSSCCB--SC--EEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--T
T ss_pred EcCCCCEEEECCCCCCCcc--cc--eEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--C
Confidence 8887643221111111111 11 11223667777776542 47788887654322 22111111122233 4
Q ss_pred CCcEEEEeCC
Q 017314 357 GKPLASADKN 366 (373)
Q Consensus 357 g~~l~s~s~d 366 (373)
++.++.|+.+
T Consensus 254 ~~i~v~GG~~ 263 (318)
T 2woz_A 254 GSLYAIGGFA 263 (318)
T ss_dssp TEEEEECCBC
T ss_pred CEEEEECCee
Confidence 6777777754
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.75 E-value=1.1 Score=40.50 Aligned_cols=177 Identities=11% Similarity=0.144 Sum_probs=107.1
Q ss_pred CCcEEEEeCCCC-ceeeeccccc----cceEEEEEcCCCCEEEEEe-------CCCcEEEEEcCCCeeEEEeecCCCcEE
Q 017314 109 DKSIKLWDTNTG-SLSSTLYGCL----GSVLDLAITHDNRSVIAAS-------SSNNLYVWDVNSGRVRHTLTGHTDKVC 176 (373)
Q Consensus 109 D~~v~iwd~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~l~s~s-------~d~~i~iwd~~~~~~~~~~~~h~~~v~ 176 (373)
+..|..|+++.. .+.+.+..|. ..|.....+++.++++..+ -.|.+.+|..+.+. -+.+.||.....
T Consensus 124 ~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa~F~ 202 (494)
T 1bpo_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFA 202 (494)
T ss_dssp SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-EEEECCSEEEEE
T ss_pred CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-cchheeeeeeeE
Confidence 558899998643 3445555543 4677888899998866332 23678899987654 446778866554
Q ss_pred EEEEeeC--CCCEEEEEeCC---CcEEEEEccCC---e---eeeEE--eecC-----ceeEEEEccCCCEEEEEeCCCcE
Q 017314 177 AVDVSKI--SSRHVVSAAYD---RTLKVWDLHKG---Y---CVNTI--IFHS-----NCNALAFSMDGQTIFSGHIDGNL 238 (373)
Q Consensus 177 ~~~~~~~--~~~~~~s~s~D---~~i~vwd~~~~---~---~~~~~--~~~~-----~~~~~~~~~~g~~l~sg~~dg~i 238 (373)
.+.+... ....++.+... +.+.+-++... . ..+.. .++. =..++.+++.-..++.-+.-|.|
T Consensus 203 ~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i 282 (494)
T 1bpo_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (494)
T ss_dssp EEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEE
T ss_pred EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceE
Confidence 4433211 11233333332 68888888532 1 11111 1111 14678888888889999999999
Q ss_pred EEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEcc
Q 017314 239 RLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIR 287 (373)
Q Consensus 239 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~ 287 (373)
++||+.++.++..-.... ..|...+..+...=++...+.|.+.-..+.
T Consensus 283 ~lyDleTgt~i~~nrIs~-~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~ 330 (494)
T 1bpo_A 283 HLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (494)
T ss_dssp EEEETTTCCEEEEEECCS-SCEEEEEEETTTTEEEEEETTCEEEEEEEC
T ss_pred EEEecccceeeeeecccC-CceEEecccCCCCcEEEEccCceEEEEEEc
Confidence 999999999887655443 344444444444444444466655444443
No 336
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.60 E-value=1.3 Score=40.48 Aligned_cols=103 Identities=10% Similarity=0.124 Sum_probs=57.7
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeE--EEeec------CCCcEEEEEEeeC---CCCEEEEEeC------
Q 017314 131 GSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVR--HTLTG------HTDKVCAVDVSKI---SSRHVVSAAY------ 193 (373)
Q Consensus 131 ~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~--~~~~~------h~~~v~~~~~~~~---~~~~~~s~s~------ 193 (373)
.....++|.|+|+++++-...+.|++++..+++.. ..+.. .......++++|. ++.+.++-+.
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 45678999999986665444457888886655432 22221 1345668899873 3333344332
Q ss_pred ------CCcEEEEEccCC--ee--eeE----Eee--cCceeEEEEccCCCEEEEEe
Q 017314 194 ------DRTLKVWDLHKG--YC--VNT----IIF--HSNCNALAFSMDGQTIFSGH 233 (373)
Q Consensus 194 ------D~~i~vwd~~~~--~~--~~~----~~~--~~~~~~~~~~~~g~~l~sg~ 233 (373)
...|.-++...+ .. ... +.. ......++|.|||.+.++.+
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 124544554321 11 111 111 12367899999998777644
No 337
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.42 E-value=1.3 Score=38.98 Aligned_cols=144 Identities=14% Similarity=0.064 Sum_probs=80.2
Q ss_pred ccCcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCcee--eec----cccccceEEEEEcCC---CCEEEEE---eCCCcE
Q 017314 87 HEGGCASILFEYNSARLISGGQDKSIKLWDTNTGSLS--STL----YGCLGSVLDLAITHD---NRSVIAA---SSSNNL 154 (373)
Q Consensus 87 h~~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~--~~~----~~~~~~v~~~~~~~~---~~~l~s~---s~d~~i 154 (373)
--..-+.++|.|||..+++--..|.|++++..++... ..+ ....+....++++|+ +..|+.. ..++.|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3456679999999987777655899999987655432 111 223456789999996 4555443 234556
Q ss_pred EEEEcCCC----------eeE-EEee-cCCCcEEEEEEeeCCCCEEEEEeC-------------CCcEEEEEccCC----
Q 017314 155 YVWDVNSG----------RVR-HTLT-GHTDKVCAVDVSKISSRHVVSAAY-------------DRTLKVWDLHKG---- 205 (373)
Q Consensus 155 ~iwd~~~~----------~~~-~~~~-~h~~~v~~~~~~~~~~~~~~s~s~-------------D~~i~vwd~~~~---- 205 (373)
.-|.+..+ +.+ ..+. +.......+.|.+ ++.+.++.+. -+.|.-.+....
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 66665541 111 1222 1111234577776 4566665432 244433344321
Q ss_pred ----eeeeEEeecCceeEEEEccCCCEEEE
Q 017314 206 ----YCVNTIIFHSNCNALAFSMDGQTIFS 231 (373)
Q Consensus 206 ----~~~~~~~~~~~~~~~~~~~~g~~l~s 231 (373)
........+.+...++|+|+|.+.++
T Consensus 189 nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~ 218 (347)
T 3das_A 189 NPFPGSPVYSYGHRNVQGLAWDDKQRLFAS 218 (347)
T ss_dssp CSSTTCCEEEBCCSBCCEEEECTTCCEEEE
T ss_pred CCCCCCeEEeeCCCCcceEEECCCCCEEEE
Confidence 00011123445778999998876554
No 338
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.26 E-value=3.3 Score=42.80 Aligned_cols=239 Identities=11% Similarity=0.156 Sum_probs=122.5
Q ss_pred cCcEEEEEEcCC----CCEEEEee---CCCcEEEEeCCCCc-ee--eeccccccceEEEEEc---CCCCEEEEEeCCCcE
Q 017314 88 EGGCASILFEYN----SARLISGG---QDKSIKLWDTNTGS-LS--STLYGCLGSVLDLAIT---HDNRSVIAASSSNNL 154 (373)
Q Consensus 88 ~~~v~~~~~~~~----~~~l~s~s---~D~~v~iwd~~~~~-~~--~~~~~~~~~v~~~~~~---~~~~~l~s~s~d~~i 154 (373)
-++|..++.... ...|++++ .+|++++..-.-+- .. ..+.+ ...++.+... ..+.+|+.+-.+.|
T Consensus 374 ~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr~Gi~~~~~~~~~l~g-v~~iWtl~~~~~~~~~~yLvlS~~~~T- 451 (1158)
T 3ei3_A 374 LGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPG-IKGLWPLRSDPNRETDDTLVLSFVGQT- 451 (1158)
T ss_dssp CCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEEESBCEEEEEEECCCS-CCEEEEECCCSSCSSCCEEEEEETTEE-
T ss_pred cCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEecCCCEEEEEeecCCC-ccEEEEEeecCCCCCCCEEEEECCCCe-
Confidence 478887776432 23666555 46888887532111 11 12332 2345555432 23457776666666
Q ss_pred EEEEcCCCeeEE-EeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecC--ceeEEEEccCCCEEEE
Q 017314 155 YVWDVNSGRVRH-TLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHS--NCNALAFSMDGQTIFS 231 (373)
Q Consensus 155 ~iwd~~~~~~~~-~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~--~~~~~~~~~~g~~l~s 231 (373)
.|+.+....... ...+-......+.........++=-. .+.|++.+...+..+..+.... .+...+.+ +..++.
T Consensus 452 ~Vl~i~~e~veev~~~gf~~~~~TL~~~~l~~~~ivQVt-~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n--~~~vvv 528 (1158)
T 3ei3_A 452 RVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQIT-SASVRLVSQEPKALVSEWKEPQAKNISVASCN--SSQVVV 528 (1158)
T ss_dssp EEEEEETTEEEEECCTTCCSSSCEEEEEEETTTEEEEEE-SSCEEEEESSSCCEEEEECCTTCCCCCEEEEC--SSEEEE
T ss_pred EEEEEeCCcccccccccccCCCCcEEEEEcCCCeEEEEe-cCEEEEEECCCCeEEEEEECCCCCEEEEEEeC--CCEEEE
Confidence 455542221111 11111111112222111122222111 2346777765544454444332 35555543 345665
Q ss_pred EeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCC------CCEEEEeeC-CCeEEEEEccccceeeeeeecCCeeec
Q 017314 232 GHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRS------GNIILTSGR-DNLHNLFDIRSLEVCGSLRATGNRVAS 304 (373)
Q Consensus 232 g~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~------~~~l~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~~~~ 304 (373)
++ ++.+.++.+..++........-...|.|+++.|. +.+++.|.. |++++++++...+.+....-.......
T Consensus 529 a~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~ 607 (1158)
T 3ei3_A 529 AV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPR 607 (1158)
T ss_dssp EE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEE
T ss_pred EE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCc
Confidence 54 6778888877654332222122357999999864 368888885 999999999877665443322111111
Q ss_pred CeeeeEECCCCcEEEEEeCCCcEEEEEcc
Q 017314 305 NWSRSCISPDESYVAAGSADGSVYIWSIS 333 (373)
Q Consensus 305 ~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~ 333 (373)
......+ ....||..|-.||.+..+.+.
T Consensus 608 si~l~~~-~~~~~L~igl~dG~l~~~~~d 635 (1158)
T 3ei3_A 608 SILMTTF-ESSHYLLCALGDGALFYFGLN 635 (1158)
T ss_dssp EEEEEEE-TTEEEEEEEETTSEEEEEEEC
T ss_pred EEEEEEe-CCCcEEEEEeCCCeEEEEEEc
Confidence 1111223 234688899999987666553
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.24 E-value=2.3 Score=41.34 Aligned_cols=191 Identities=9% Similarity=0.082 Sum_probs=100.0
Q ss_pred CCCCEEEEeeCC----CcEEEEeCCCCceeeec--------cccccceEEEEEcCCCCEEEEEeCC------CcEEEEEc
Q 017314 98 YNSARLISGGQD----KSIKLWDTNTGSLSSTL--------YGCLGSVLDLAITHDNRSVIAASSS------NNLYVWDV 159 (373)
Q Consensus 98 ~~~~~l~s~s~D----~~v~iwd~~~~~~~~~~--------~~~~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~ 159 (373)
.++..++.||.+ ..+.+||..++.-...- .........+.+..++..++.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 567788888854 46888898776432211 1111112223332266677777654 35788998
Q ss_pred CCCeeEEE--eecCCCcEEEEEEeeCCCCEEEEEeCCC--cEEEEEccCCeeeeEEe---ec---CceeEEEEccC-CCE
Q 017314 160 NSGRVRHT--LTGHTDKVCAVDVSKISSRHVVSAAYDR--TLKVWDLHKGYCVNTII---FH---SNCNALAFSMD-GQT 228 (373)
Q Consensus 160 ~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~~s~s~D~--~i~vwd~~~~~~~~~~~---~~---~~~~~~~~~~~-g~~ 228 (373)
.+.+-... +......- +.... .++..++.|+.++ .+.+||..++.....-. .. ....++.+..+ +..
T Consensus 476 ~t~~W~~~~~~p~~R~~h-~~~~~-~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRH-SACSL-PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQG 553 (695)
T ss_dssp TTTEEEECCCCSBCCBSC-EEEEC-TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEE
T ss_pred CCCcEEECCCCCCCcccc-eEEEE-cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEE
Confidence 87643221 11111111 11111 1566777787654 68899998765432211 11 11233555555 566
Q ss_pred EEEEeC--C-----CcEEEEECCCCee-----eEEEec---ccccceEEEEEcCCCCEEEEeeCC--------CeEEEEE
Q 017314 229 IFSGHI--D-----GNLRLWDIQTGKL-----LSEVAA---HSLAAVTSISLSRSGNIILTSGRD--------NLHNLFD 285 (373)
Q Consensus 229 l~sg~~--d-----g~i~iwd~~~~~~-----~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~d--------~~i~~~d 285 (373)
++.|+. + ..+.+||+.+.+. -..+.. .......++ ...++++++.||.+ +.+.+||
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~-~~~~~~iyv~GG~~~~~~~~~~~~v~~yd 632 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK-YITPRKLLIVGGTSPSGLFDRTNSIISLD 632 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE-EEETTEEEEECCBCSSCCCCTTTSEEEEE
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE-EeCCCEEEEECCccCCCCCCCCCeEEEEE
Confidence 666765 2 3588999987761 122211 111112222 33336777777743 4578899
Q ss_pred ccccce
Q 017314 286 IRSLEV 291 (373)
Q Consensus 286 ~~~~~~ 291 (373)
+.+.+.
T Consensus 633 ~~t~~W 638 (695)
T 2zwa_A 633 PLSETL 638 (695)
T ss_dssp TTTTEE
T ss_pred CCCCeE
Confidence 876543
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.18 E-value=1.5 Score=38.47 Aligned_cols=234 Identities=14% Similarity=0.067 Sum_probs=121.5
Q ss_pred cccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeE--EEe----ecCCCcEEEEEEeeC---CCCEEEEE--eCCCcE
Q 017314 129 CLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVR--HTL----TGHTDKVCAVDVSKI---SSRHVVSA--AYDRTL 197 (373)
Q Consensus 129 ~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~--~~~----~~h~~~v~~~~~~~~---~~~~~~s~--s~D~~i 197 (373)
.......++|.|||+.+++--..+.|++++..+++.. ..+ .........++++|. ++...++- ..+..|
T Consensus 30 gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 30 GLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 3455678999999987666555899999987665532 112 122345678888873 23333332 234455
Q ss_pred EEEEccCC-----e-----ee-eEEee--cCceeEEEEccCCCEEEEEeC-------------CCcEEEEECCCCe----
Q 017314 198 KVWDLHKG-----Y-----CV-NTIIF--HSNCNALAFSMDGQTIFSGHI-------------DGNLRLWDIQTGK---- 247 (373)
Q Consensus 198 ~vwd~~~~-----~-----~~-~~~~~--~~~~~~~~~~~~g~~l~sg~~-------------dg~i~iwd~~~~~---- 247 (373)
.-|.+..+ . .+ ..+.. ......+.|.|||.+.++-+. -|.|.-.+....-
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 55555431 1 11 11111 123456999999987776432 2445444543210
Q ss_pred ---eeEEEecccccceEEEEEcCCCCEEEEe-eCCCeEEEEEccccceeeeeeec--------CCeee------cCeeee
Q 017314 248 ---LLSEVAAHSLAAVTSISLSRSGNIILTS-GRDNLHNLFDIRSLEVCGSLRAT--------GNRVA------SNWSRS 309 (373)
Q Consensus 248 ---~~~~~~~~~~~~v~~~~~~~~~~~l~s~-~~d~~i~~~d~~~~~~~~~~~~~--------~~~~~------~~~~~~ 309 (373)
....+.... .....++|+|+|.+.++- +.|+.-.+.-+..+...+--... ..++. ..-.-+
T Consensus 190 Pf~~~~i~a~G~-RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~ 268 (347)
T 3das_A 190 PFPGSPVYSYGH-RNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGI 268 (347)
T ss_dssp SSTTCCEEEBCC-SBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEE
T ss_pred CCCCCeEEeeCC-CCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcce
Confidence 001111111 345678999998877664 34443333222221110000000 00000 011122
Q ss_pred EECCCCcEEEEEeCCCcEEEEEccCceE----EEEeccCCccEEEEEEcCCCCcEEEEe
Q 017314 310 CISPDESYVAAGSADGSVYIWSISKADI----VRTLKEHTAPVLSCSWSGLGKPLASAD 364 (373)
Q Consensus 310 ~~s~~~~~l~sgs~Dg~i~iwd~~~~~~----~~~l~~h~~~V~~~~~s~~g~~l~s~s 364 (373)
+|. +|..+...-..+.|....+..... ...+.+..+.+.+|+..|||.++++.+
T Consensus 269 ~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 269 AYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred EEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 332 466666666666777667665432 334555557899999999998666654
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.11 E-value=2.6 Score=40.90 Aligned_cols=198 Identities=7% Similarity=0.042 Sum_probs=100.6
Q ss_pred CCCCEEEEEeCC----CcEEEEEcCCCeeEEEe-e-----cCCCc-EEEEEEeeCCCCEEEEEeCC------CcEEEEEc
Q 017314 140 HDNRSVIAASSS----NNLYVWDVNSGRVRHTL-T-----GHTDK-VCAVDVSKISSRHVVSAAYD------RTLKVWDL 202 (373)
Q Consensus 140 ~~~~~l~s~s~d----~~i~iwd~~~~~~~~~~-~-----~h~~~-v~~~~~~~~~~~~~~s~s~D------~~i~vwd~ 202 (373)
.++..++.|+.+ ..+.+||+.+++-...- . ..... -.++.....++..++.|+.+ ..+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777653 46888998877533222 1 01111 11222211045566777654 34778888
Q ss_pred cCCeeeeEEeec--CceeEEEEccCCCEEEEEeCCC--cEEEEECCCCeeeEEEe---c-ccccceEEEEEcCC-CCEEE
Q 017314 203 HKGYCVNTIIFH--SNCNALAFSMDGQTIFSGHIDG--NLRLWDIQTGKLLSEVA---A-HSLAAVTSISLSRS-GNIIL 273 (373)
Q Consensus 203 ~~~~~~~~~~~~--~~~~~~~~~~~g~~l~sg~~dg--~i~iwd~~~~~~~~~~~---~-~~~~~v~~~~~~~~-~~~l~ 273 (373)
.+......-..+ ....+++.-.++..++.|+.++ .+.+||+.+.+-...-. . .......++.+..+ +++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 776432221111 1112333324788888887655 69999998875432211 0 01112233555555 66777
Q ss_pred EeeCC-------CeEEEEEccccce-----eeeeeecCCeeecCeeeeEECCCCcEEEEEeCC--------CcEEEEEcc
Q 017314 274 TSGRD-------NLHNLFDIRSLEV-----CGSLRATGNRVASNWSRSCISPDESYVAAGSAD--------GSVYIWSIS 333 (373)
Q Consensus 274 s~~~d-------~~i~~~d~~~~~~-----~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~D--------g~i~iwd~~ 333 (373)
.||.+ +.+..||+.+... -..+... .........++...++.+++.|+.+ ..|.+||+.
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~-p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~ 634 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQH-PLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPL 634 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEEC-GGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETT
T ss_pred ECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCC-CCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECC
Confidence 77652 3577888876541 0111110 0000001112222337777777743 469999998
Q ss_pred CceEE
Q 017314 334 KADIV 338 (373)
Q Consensus 334 ~~~~~ 338 (373)
+.+-.
T Consensus 635 t~~W~ 639 (695)
T 2zwa_A 635 SETLT 639 (695)
T ss_dssp TTEEE
T ss_pred CCeEE
Confidence 76543
No 342
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.99 E-value=1.6 Score=37.82 Aligned_cols=192 Identities=10% Similarity=0.105 Sum_probs=107.5
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCC-ceeeeccccc----cceEEEEEcCCCCEEEEEe-------CCCcEEEE
Q 017314 90 GCASILFEYNSARLISGGQDKSIKLWDTNTG-SLSSTLYGCL----GSVLDLAITHDNRSVIAAS-------SSNNLYVW 157 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~-~~~~~~~~~~----~~v~~~~~~~~~~~l~s~s-------~d~~i~iw 157 (373)
.|.--.|-.+ +.|+-.. +..|..|+++.. .+.+.+..|. ..|.....+++.++++..+ -.|.+.+|
T Consensus 108 ~VvfWkWis~-~~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 185 (365)
T 2xzh_A 108 DVTFWKWISL-NTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 185 (365)
T ss_dssp CEEEEEECSS-SEEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEE
T ss_pred ccEEEEecCC-CeEEEEc-CCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEE
Confidence 4444444433 3333333 458889988743 3444555443 4677888899998765432 23678899
Q ss_pred EcCCCeeEEEeecCCCcEEEEEEee--CCCCEEEEEeC---CCcEEEEEccCC---e-e----eeEEeecC----c-eeE
Q 017314 158 DVNSGRVRHTLTGHTDKVCAVDVSK--ISSRHVVSAAY---DRTLKVWDLHKG---Y-C----VNTIIFHS----N-CNA 219 (373)
Q Consensus 158 d~~~~~~~~~~~~h~~~v~~~~~~~--~~~~~~~s~s~---D~~i~vwd~~~~---~-~----~~~~~~~~----~-~~~ 219 (373)
..+.+. -+.++||......+.+.. .....++.+.. -+.+.+-++... . . ...+.++. + ..+
T Consensus 186 S~er~~-sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVa 264 (365)
T 2xzh_A 186 SVDRKV-SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVA 264 (365)
T ss_dssp ETTTTE-EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEE
T ss_pred eecccc-cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEE
Confidence 987764 446778865543332211 11122332322 257888887432 1 1 11111221 1 456
Q ss_pred EEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEE
Q 017314 220 LAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFD 285 (373)
Q Consensus 220 ~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d 285 (373)
+.+++.-..++.-+.-|.|++||+.++.++..-.... ..|..-+.++...=++.-.+.|.+.-..
T Consensus 265 mqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~-d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~ 329 (365)
T 2xzh_A 265 MQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG-ETIFVTAPHEATAGIIGVNRKGQVLSVC 329 (365)
T ss_dssp EEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS-SCEEEEEEEGGGTEEEEEETTCEEEEEE
T ss_pred EEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCC-CceEEecccCCCCcEEEEcCCCEEEEEE
Confidence 7788877888888999999999999999887655443 3333333333323333333555444333
No 343
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.47 E-value=0.86 Score=42.50 Aligned_cols=123 Identities=15% Similarity=0.046 Sum_probs=74.7
Q ss_pred EeecCceeEEEEccCCCEEEEEe-CCCcEEEEECCCC------ee-------eEEEecccccceEEEEEcCCCCEEEEee
Q 017314 211 IIFHSNCNALAFSMDGQTIFSGH-IDGNLRLWDIQTG------KL-------LSEVAAHSLAAVTSISLSRSGNIILTSG 276 (373)
Q Consensus 211 ~~~~~~~~~~~~~~~g~~l~sg~-~dg~i~iwd~~~~------~~-------~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 276 (373)
+......-.+-++|||++++.++ .+.++.++|+... +. ..+... .....-.+|+++|+-..+--
T Consensus 319 iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~--GlGPlHt~Fd~~G~aYTtlf 396 (638)
T 3sbq_A 319 VPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL--GLGPLHTTFDGRGNAYTTLF 396 (638)
T ss_dssp EEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC--CSCEEEEEECSSSEEEEEET
T ss_pred EeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC--CCcccEEEECCCCceEeeee
Confidence 34444455688999999988654 6889999998742 11 111211 13466789999996666667
Q ss_pred CCCeEEEEEcccc----------ceeeeeeecCCeeecCe-eeeEECCCCcEEEEEe---CCCc----------EEEEEc
Q 017314 277 RDNLHNLFDIRSL----------EVCGSLRATGNRVASNW-SRSCISPDESYVAAGS---ADGS----------VYIWSI 332 (373)
Q Consensus 277 ~d~~i~~~d~~~~----------~~~~~~~~~~~~~~~~~-~~~~~s~~~~~l~sgs---~Dg~----------i~iwd~ 332 (373)
-|..+.-|++... .++..+..+-.+..... ..-...|||+||++.. .|+. -.+.|+
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidI 476 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDI 476 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEEC
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEec
Confidence 8999999998754 23444433322211100 0001258999998864 4553 367777
Q ss_pred cCc
Q 017314 333 SKA 335 (373)
Q Consensus 333 ~~~ 335 (373)
...
T Consensus 477 sGd 479 (638)
T 3sbq_A 477 SGD 479 (638)
T ss_dssp SSS
T ss_pred CCC
Confidence 543
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.23 E-value=4.5 Score=39.59 Aligned_cols=263 Identities=13% Similarity=0.146 Sum_probs=138.4
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 168 (373)
..|.++....++ .|..|+.+| +..||..+.............|.++.. .++ .|..++.+ -+..+|..+++.....
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~~~~ 137 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLTSFD 137 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEEEEC
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEEEec
Confidence 468888777766 455556555 778998876443211112234666544 344 45556655 6888998776543220
Q ss_pred e----cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeec-------CceeEEEEccCCCEEEEEeCCCc
Q 017314 169 T----GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFH-------SNCNALAFSMDGQTIFSGHIDGN 237 (373)
Q Consensus 169 ~----~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~-------~~~~~~~~~~~g~~l~sg~~dg~ 237 (373)
. .....|.++.... .+ .+..|..+ -+..+|..++.... +... ..+.++...+++..|..|+. +-
T Consensus 138 ~~~~~l~~~~i~~i~~d~-~g-~lWigt~~-Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~G 212 (758)
T 3ott_A 138 TRRNGLPNNTIYSIIRTK-DN-QIYVGTYN-GLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GY 212 (758)
T ss_dssp HHHHCCSCSCEEEEEECT-TC-CEEEEETT-EEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EE
T ss_pred cCCCCcCCCeEEEEEEcC-CC-CEEEEeCC-CHhhCccCCCceEE-ecCCCccccccceeEEEEEECCCCEEEEEEC-CC
Confidence 1 1124566665443 33 34445554 47778877654321 1111 12667777777765555554 45
Q ss_pred EEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecC---Cee-ecCeeeeEECC
Q 017314 238 LRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATG---NRV-ASNWSRSCISP 313 (373)
Q Consensus 238 i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~---~~~-~~~~~~~~~s~ 313 (373)
+..+|..+++... +.......|.++..+++|.+.+.. .+ -+.+++..+.... .+.... ... ...+..+..+.
T Consensus 213 l~~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWigT-~~-Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~ 288 (758)
T 3ott_A 213 LFQYFPSTGQIKQ-TEAFHNNSIKSLALDGNGDLLAGT-DN-GLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQ 288 (758)
T ss_dssp EEEEETTTTEEEE-EEEEEEEEEEEEEECTTCCEEEEE-TT-EEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECT
T ss_pred CeEEcCCCCeEEe-ccCCCCCeEEEEEEcCCCCEEEEe-CC-ceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcC
Confidence 7888987765432 221122468899999998877665 34 4667776554321 111110 011 11122344455
Q ss_pred CCcEEEEEeCCCcEEEEEccCceEEEEec-------cCCccEEEEEEcCCCCcEEEEeCCCeEE
Q 017314 314 DESYVAAGSADGSVYIWSISKADIVRTLK-------EHTAPVLSCSWSGLGKPLASADKNGVVC 370 (373)
Q Consensus 314 ~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~-------~h~~~V~~~~~s~~g~~l~s~s~dg~i~ 370 (373)
+|. |-.|+..| +.+..... ....+. .....|.++.-.++|..-+. +.+|..+
T Consensus 289 ~g~-lWiGT~~G-l~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiG-t~~Gl~~ 347 (758)
T 3ott_A 289 EHN-IWLGTDYG-ISLSRYNS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFG-GANGLIR 347 (758)
T ss_dssp TCC-EEEEESSS-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEE-ETTEEEE
T ss_pred CCC-EEEEeCCc-ccccccCC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEEe-eCCccee
Confidence 554 34455566 55443321 111111 12246888888777764333 3455443
No 345
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=92.17 E-value=4.8 Score=34.03 Aligned_cols=240 Identities=13% Similarity=0.084 Sum_probs=111.8
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEee
Q 017314 90 GCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLT 169 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~ 169 (373)
.|..++.......++ . |+.|..|-.+....+..-......|..++...+...++ . |+.|+.|-.+..-.+....
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg~P~ 98 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTTVPA 98 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTCCCG
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCCCCc
Confidence 455565554433333 4 88888887554322111111123566666554332222 4 8899999765421111111
Q ss_pred cCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeee-EEeecCceeEEEEccCCCEEEEEeCCCcEEEEECCCCee
Q 017314 170 GHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVN-TIIFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQTGKL 248 (373)
Q Consensus 170 ~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~-~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~ 248 (373)
.-...|..++... .+.+.-. ||.|..|-......+. .......+..++...+. .+.-. ||.|..|-......
T Consensus 99 ~~~~~v~~ia~G~---~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~l~-~G~v~~wG~n~~gq 171 (282)
T 3qhy_B 99 EARSGVDAIAAGA---WASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALAVK-NGGVIAWGDNYFGQ 171 (282)
T ss_dssp GGSSSEEEEEEET---TEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEEEE-TTEEEEEECCTTST
T ss_pred ccCCCeEEEECcC---CEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEEEE-CCEEEEecCCCCCC
Confidence 1124566666532 3444445 9999999765321111 00112335555443332 22223 78888886643211
Q ss_pred eEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEE
Q 017314 249 LSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVY 328 (373)
Q Consensus 249 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~ 328 (373)
+. +.......|..++.......++ .|+.+..|-........... .....+..++.... ..++.. ||.|+
T Consensus 172 lg-~p~~~~~~v~~i~~G~~hs~al---~~G~v~~wG~n~~gqlg~p~----~~~~~v~~i~~G~~-h~~al~--~g~v~ 240 (282)
T 3qhy_B 172 TT-VPAEAQSGVDDVAGGIFHSLAL---KDGKVIAWGDNRYKQTTVPT----EALSGVSAIASGEW-YSLALK--NGKVI 240 (282)
T ss_dssp TS-CCGGGGSSEEEEEECSSEEEEE---ETTEEEEEECCTTSTTCCCG----GGGSSCCEEEECSS-CEEEEE--TTEEE
T ss_pred CC-CceecCCCeEEEEecCCEEEEE---ECCeEEEEECCCCCCCCCCc----ccCCCceEEEcCCC-EEEEEE--CCEEE
Confidence 11 1111123466666544333333 47888888755432222111 11111222222222 233333 99999
Q ss_pred EEEccCceEEEEeccCCccEEEEEEcCCC
Q 017314 329 IWSISKADIVRTLKEHTAPVLSCSWSGLG 357 (373)
Q Consensus 329 iwd~~~~~~~~~l~~h~~~V~~~~~s~~g 357 (373)
.|-.....++.. ...|.+++-.+..
T Consensus 241 ~wG~n~~gq~~v----~~~v~~iaaG~~h 265 (282)
T 3qhy_B 241 AWGSSRTAPSSV----QSGVSSIEAGPNA 265 (282)
T ss_dssp EESTTCCCCGGG----SSCEEEEEECSSC
T ss_pred EecCCCCccccC----CCCcEEEEECcCe
Confidence 996554333221 2356677665543
No 346
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.92 E-value=5.1 Score=41.96 Aligned_cols=144 Identities=12% Similarity=0.185 Sum_probs=85.4
Q ss_pred CCcEEEEeCCCC-ceeeecccc----ccceEEEEEcCCCCEEEEEe-------CCCcEEEEEcCCCeeEEEeecCCCcEE
Q 017314 109 DKSIKLWDTNTG-SLSSTLYGC----LGSVLDLAITHDNRSVIAAS-------SSNNLYVWDVNSGRVRHTLTGHTDKVC 176 (373)
Q Consensus 109 D~~v~iwd~~~~-~~~~~~~~~----~~~v~~~~~~~~~~~l~s~s-------~d~~i~iwd~~~~~~~~~~~~h~~~v~ 176 (373)
+..|..|++... .+.+.+..| ...|.+...+++.++++..+ -.|.+.+|.++.+. .+.+.||.....
T Consensus 124 ~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~ 202 (1630)
T 1xi4_A 124 DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFA 202 (1630)
T ss_pred CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhh
Confidence 458999999643 344445444 34677788888888765332 34788899887653 334566655443
Q ss_pred EEEEe--eCCCCEEEEEeC---CCcEEEEEccCC---e-ee--e--EEeecC-----ceeEEEEccCCCEEEEEeCCCcE
Q 017314 177 AVDVS--KISSRHVVSAAY---DRTLKVWDLHKG---Y-CV--N--TIIFHS-----NCNALAFSMDGQTIFSGHIDGNL 238 (373)
Q Consensus 177 ~~~~~--~~~~~~~~s~s~---D~~i~vwd~~~~---~-~~--~--~~~~~~-----~~~~~~~~~~g~~l~sg~~dg~i 238 (373)
.+.+. +.....++.+.. -+.+.|-++... . .. + .+.++. -..++..++.-..++.-+.-|.|
T Consensus 203 ~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~ 282 (1630)
T 1xi4_A 203 QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYI 282 (1630)
T ss_pred eeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceE
Confidence 33221 111222222211 267888887432 1 11 0 011111 13567777777788888899999
Q ss_pred EEEECCCCeeeEEEe
Q 017314 239 RLWDIQTGKLLSEVA 253 (373)
Q Consensus 239 ~iwd~~~~~~~~~~~ 253 (373)
.++|+.++.++..-.
T Consensus 283 ~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 283 HLYDLETGTCIYMNR 297 (1630)
T ss_pred EEEecccchhhhhcc
Confidence 999999998775443
No 347
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.74 E-value=5.7 Score=33.98 Aligned_cols=163 Identities=9% Similarity=0.100 Sum_probs=89.3
Q ss_pred EEEcCCCCEEEEeeCC--------------CcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEe----CCCcEE
Q 017314 94 ILFEYNSARLISGGQD--------------KSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAAS----SSNNLY 155 (373)
Q Consensus 94 ~~~~~~~~~l~s~s~D--------------~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s----~d~~i~ 155 (373)
--++++|.+|+-+... ..|+..++..+.... +.. .. ...|+++++.|+-.. ....|.
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy 132 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLY 132 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEE
Confidence 4567888888766542 467777777654322 211 11 236777888888776 334566
Q ss_pred EEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEeCC
Q 017314 156 VWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGHID 235 (373)
Q Consensus 156 iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~d 235 (373)
.-++..... ..+..+.. ..+++.......+.....+|.+-++..+.... + ...... ..+.|++.+|+-...+
T Consensus 133 ~~~~dGs~~-~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~-l-~~~~~~-~~~~P~g~~iy~t~~~ 204 (302)
T 3s25_A 133 RIRIDGEEK-KKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL-F-YDCNCY-KPVVLDDTNVYYMDVN 204 (302)
T ss_dssp EEETTSCCC-EEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE-E-ECSCEE-EEEEEETTEEEEEEGG
T ss_pred EEECCCCCe-EEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE-E-eCCCcc-ceeeecCCEEEEEEcC
Confidence 666654433 33443322 23445444434444446788888877655332 2 222222 3466989888755443
Q ss_pred --CcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEe
Q 017314 236 --GNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTS 275 (373)
Q Consensus 236 --g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 275 (373)
..|..-++.... ...+... .+ ..++|++..|.-+
T Consensus 205 ~~~~I~~~~ldG~~-~~~Lt~~---~~--~~~~~~g~~Iy~~ 240 (302)
T 3s25_A 205 RDNAIVHVNINNPN-PVVLTEA---NI--EHYNVYGSLIFYQ 240 (302)
T ss_dssp GTTEEEEECSSSCC-CEECSCS---CE--EEEEEETTEEEEE
T ss_pred CCcEEEEEECCCCC-eEEEeCC---Cc--ceEEECCCEEEEE
Confidence 356666665543 2333322 22 2367778777654
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=89.95 E-value=15 Score=35.79 Aligned_cols=262 Identities=11% Similarity=0.049 Sum_probs=137.4
Q ss_pred CcEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeee-ccc----cccceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCe
Q 017314 89 GGCASILFEYNSARLISGGQDKSIKLWDTNTGSLSST-LYG----CLGSVLDLAITHDNRSVIAASSSNNLYVWDVNSGR 163 (373)
Q Consensus 89 ~~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 163 (373)
..|.++....++...+ |+.+ -+..+|..++..... ... ....|.++....++..|..|+. +-+..+|..+++
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~ 222 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQ 222 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTE
T ss_pred CeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCe
Confidence 4578888877777555 4444 477788776643221 111 1224778877777775555554 468889988775
Q ss_pred eEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeEEee---------cCceeEEEEccCCCEEEEEeC
Q 017314 164 VRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNTIIF---------HSNCNALAFSMDGQTIFSGHI 234 (373)
Q Consensus 164 ~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~~~~---------~~~~~~~~~~~~g~~l~sg~~ 234 (373)
......-....|.++.... ...+..|.. +-+.+++..++... .+.. ...+.++....+|..- .|+.
T Consensus 223 ~~~~~~l~~~~i~~i~~d~--~g~lWigT~-~Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-iGT~ 297 (758)
T 3ott_A 223 IKQTEAFHNNSIKSLALDG--NGDLLAGTD-NGLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQEHNIW-LGTD 297 (758)
T ss_dssp EEEEEEEEEEEEEEEEECT--TCCEEEEET-TEEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTTCCEE-EEES
T ss_pred EEeccCCCCCeEEEEEEcC--CCCEEEEeC-CceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCCCCEE-EEeC
Confidence 4322111233466665443 334555554 45778887665432 1211 1236777777777644 4555
Q ss_pred CCcEEEEECCCCeeeEEEec------ccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccc--eeeeeeec--CCeee-
Q 017314 235 DGNLRLWDIQTGKLLSEVAA------HSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLE--VCGSLRAT--GNRVA- 303 (373)
Q Consensus 235 dg~i~iwd~~~~~~~~~~~~------~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~--~~~~~~~~--~~~~~- 303 (373)
.| +.++.... ....+.. .....|.++..+++|++.+.. .++ +..++..+.. ....+... .....
T Consensus 298 ~G-l~~~~~~~--~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWiGt-~~G-l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 372 (758)
T 3ott_A 298 YG-ISLSRYNS--ALQFIPISQITGTGDGNQFYSLFRDSKGFYWFGG-ANG-LIRFTDPAGERHDAIWYRMGDKTYPLSH 372 (758)
T ss_dssp SS-EEEECCCC---CEEEEHHHHSCSCCCCBEEEEEECTTCCEEEEE-TTE-EEEESCTTSSCCCCEEECTTCSSSCCSC
T ss_pred Cc-ccccccCC--ceeEEecccCCCCCCCceEEEEEEcCCCCEEEee-CCc-ceeecccccccceeEEeccCCcCCCCCC
Confidence 56 54443221 1111111 112468899999999877664 444 4455544321 11111110 00111
Q ss_pred cCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEe--cc----CCccEEEEEEcCCCCcEEEEeCC
Q 017314 304 SNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTL--KE----HTAPVLSCSWSGLGKPLASADKN 366 (373)
Q Consensus 304 ~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l--~~----h~~~V~~~~~s~~g~~l~s~s~d 366 (373)
..+..++...+|.+- .|+. +-|..++..+++..... .. ....|.++...++|+..+ |+..
T Consensus 373 ~~v~~i~~d~~g~lW-igt~-~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gT~~ 438 (758)
T 3ott_A 373 NRIRHIYEDKEQQLW-IATD-GSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWI-STCL 438 (758)
T ss_dssp SCEEEEEECTTSCEE-EEET-TEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEEE-EESS
T ss_pred CceEEEEECCCCCEE-EEeC-CcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEEE-EECC
Confidence 112234445666543 3554 45899998877654321 11 224588888888776444 4433
No 349
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.86 E-value=8.2 Score=32.57 Aligned_cols=216 Identities=16% Similarity=0.121 Sum_probs=100.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCCeeeeE-
Q 017314 132 SVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKGYCVNT- 210 (373)
Q Consensus 132 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~~~~~~- 210 (373)
.|..++.... ..+.-. |+.++.|-.+..-.+.........|..++.. ....++- . ||.|..|-....-.+..
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G--~~hs~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTMPAATQSGVDAIAAG--NYHSLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSCCGGGGSCCCEEEEC--SSEEEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeC--CCEEEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 4666665433 222234 8899999765422111111122356666543 2333333 4 99999997653211100
Q ss_pred EeecCceeEEEEccCCCEEEEEeCCCcEEEEECCC-CeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEcccc
Q 017314 211 IIFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQT-GKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSL 289 (373)
Q Consensus 211 ~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~ 289 (373)
......+..++...+. .+.-. ||.|..|-... +++- +.......|..++.......++ . |+.+..|-....
T Consensus 98 ~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg--~~~~~~~~i~~i~~G~~~~~~l--~-~G~v~~wG~n~~ 169 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTT--VPAEAQSGVTALDGGVYTALAV--K-NGGVIAWGDNYF 169 (282)
T ss_dssp GGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTS--CCGGGGSSEEEEEECSSEEEEE--E-TTEEEEEECCTT
T ss_pred cccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCC--CCccCCCCeEEEEcccCEEEEE--E-CCEEEEecCCCC
Confidence 0012345555554333 33334 88898887643 2221 1111123566665544333333 2 677777765543
Q ss_pred ceeeeeeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEeCCCeE
Q 017314 290 EVCGSLRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASADKNGVV 369 (373)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s~dg~i 369 (373)
....... .....+..++.. ....++. .||.|+.|-......+..-..-...|..++-.... .++.. ||.|
T Consensus 170 gqlg~p~----~~~~~v~~i~~G-~~hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h-~~al~--~g~v 239 (282)
T 3qhy_B 170 GQTTVPA----EAQSGVDDVAGG-IFHSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWY-SLALK--NGKV 239 (282)
T ss_dssp STTSCCG----GGGSSEEEEEEC-SSEEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSC-EEEEE--TTEE
T ss_pred CCCCCce----ecCCCeEEEEec-CCEEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCE-EEEEE--CCEE
Confidence 2222110 011112222222 2233444 59999999754421111111112346667654432 33333 8888
Q ss_pred EEc
Q 017314 370 CVW 372 (373)
Q Consensus 370 ~iW 372 (373)
..|
T Consensus 240 ~~w 242 (282)
T 3qhy_B 240 IAW 242 (282)
T ss_dssp EEE
T ss_pred EEe
Confidence 888
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=86.26 E-value=15 Score=31.35 Aligned_cols=233 Identities=10% Similarity=0.037 Sum_probs=111.3
Q ss_pred CCCCEEEEee--CCCcEEEEeCCCCceeeeccccccceEEEEEcCCCCEEEEEeCC--------------CcEEEEEcCC
Q 017314 98 YNSARLISGG--QDKSIKLWDTNTGSLSSTLYGCLGSVLDLAITHDNRSVIAASSS--------------NNLYVWDVNS 161 (373)
Q Consensus 98 ~~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d--------------~~i~iwd~~~ 161 (373)
.++.+|+-.. .++.|...+..... ...+.. ..+ --+++++.+|+-+... ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~--~~~--~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN--DTA--MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE--EEE--EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC--Cce--eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 3555554433 24555555554332 222221 112 3457888888776543 4677778776
Q ss_pred CeeEEEeecCCCcEEEEEEeeCCCCEEEEEe--CC--CcEEEEEccCCeeeeEEeecCceeEEEEccCCCEEEEEeC-CC
Q 017314 162 GRVRHTLTGHTDKVCAVDVSKISSRHVVSAA--YD--RTLKVWDLHKGYCVNTIIFHSNCNALAFSMDGQTIFSGHI-DG 236 (373)
Q Consensus 162 ~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s--~D--~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sg~~-dg 236 (373)
++... +.. .... .+++. ++.|+-.. .+ ..|..-++.... ...+..+ .+ .+++|+|+.|+=.+. ..
T Consensus 98 ~~~~~-l~~--~~~~--~~s~~-g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~-~~--~~~~~~g~~iy~t~~g~~ 167 (302)
T 3s25_A 98 HGSTV-LDP--DPCI--YASLI-GNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNH-YL--FTCNTSDRYFYYNNPKNG 167 (302)
T ss_dssp CCCEE-EEC--SCEE--EEEEE-TTEEEEEEESSSSCEEEEEEETTSCC-CEEEESS-CC--CCSEEETTEEEEECTTTC
T ss_pred CcceE-eec--CCcc--EEEEe-CCEEEEEeecCCCCceEEEEECCCCC-eEEEeCC-Cc--eEeeEECCEEEEEeCCCc
Confidence 65332 221 1222 34453 44555443 33 444444554322 2223222 22 456788888874443 67
Q ss_pred cEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCC--CeEEEEEccccceeeeeeecCCeeecCeeeeEECCC
Q 017314 237 NLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRD--NLHNLFDIRSLEVCGSLRATGNRVASNWSRSCISPD 314 (373)
Q Consensus 237 ~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 314 (373)
.|..-++..+... .+... ... ..+.|++.+|+-...+ ..|..-++..... ..+. .... ..++|+
T Consensus 168 ~Iy~~~l~g~~~~-~l~~~---~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt--~~~~------~~~~~~ 233 (302)
T 3s25_A 168 QLYRYDTASQSEA-LFYDC---NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLT--EANI------EHYNVY 233 (302)
T ss_dssp CEEEEETTTTEEE-EEECS---CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECS--CSCE------EEEEEE
T ss_pred eEEEEECCCCCEE-EEeCC---Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEe--CCCc------ceEEEC
Confidence 8888888766543 23222 111 2355888877655433 2344444433221 1111 1111 236788
Q ss_pred CcEEEEEeC--CCcEEEEEccCceEEEEeccCCccEEEEEEcCCCCcEEEEe
Q 017314 315 ESYVAAGSA--DGSVYIWSISKADIVRTLKEHTAPVLSCSWSGLGKPLASAD 364 (373)
Q Consensus 315 ~~~l~sgs~--Dg~i~iwd~~~~~~~~~l~~h~~~V~~~~~s~~g~~l~s~s 364 (373)
+.+|.-++. .+.|..-++.... .+.+... .+. ++++.+.+|.-..
T Consensus 234 g~~Iy~~~~~~~~~i~~~~~DG~~-r~~l~~~--~~~--~i~i~~d~Iy~td 280 (302)
T 3s25_A 234 GSLIFYQRGGDNPALCVVKNDGTG-FKELAKG--EFC--NINVTSQYVYFTD 280 (302)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCC-CEEEEES--CEE--EEEECSSEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEECCCCc-cEEeeCC--ccc--eEEEeCCEEEEEE
Confidence 887765432 3445555554322 2222211 232 3444556665544
No 351
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=85.40 E-value=18 Score=33.00 Aligned_cols=54 Identities=11% Similarity=0.122 Sum_probs=34.5
Q ss_pred CceeEEEEccCCC-EEEEEeCCCcEEEEECCCCe---eeEEEec--------ccccceEEEEEcCC
Q 017314 215 SNCNALAFSMDGQ-TIFSGHIDGNLRLWDIQTGK---LLSEVAA--------HSLAAVTSISLSRS 268 (373)
Q Consensus 215 ~~~~~~~~~~~g~-~l~sg~~dg~i~iwd~~~~~---~~~~~~~--------~~~~~v~~~~~~~~ 268 (373)
.....++|.|||. .++.+...|.|++++..... .+..+.. ........|+|+|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3467899999996 45666788999999754221 2222210 01245788999996
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=80.85 E-value=29 Score=30.55 Aligned_cols=69 Identities=14% Similarity=0.126 Sum_probs=35.6
Q ss_pred cCcEEEEEEcC-CCCEEEEeeCCC----cEEEEeCCCCceeeec------cc--------cccceEEEEEcCC--CCEEE
Q 017314 88 EGGCASILFEY-NSARLISGGQDK----SIKLWDTNTGSLSSTL------YG--------CLGSVLDLAITHD--NRSVI 146 (373)
Q Consensus 88 ~~~v~~~~~~~-~~~~l~s~s~D~----~v~iwd~~~~~~~~~~------~~--------~~~~v~~~~~~~~--~~~l~ 146 (373)
...|.+|+++| +...|..++..+ .|...+ ..++.-..+ .. ....|.++++.|. ...++
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 35689999998 344455555444 343332 222211111 11 1125778888862 45566
Q ss_pred EEeCCCcEEEE
Q 017314 147 AASSSNNLYVW 157 (373)
Q Consensus 147 s~s~d~~i~iw 157 (373)
++...+.|...
T Consensus 133 ~g~~~ggl~~S 143 (394)
T 3b7f_A 133 AGTSPQGLFRS 143 (394)
T ss_dssp EEEETTEEEEE
T ss_pred EEecCCcEEEE
Confidence 66665655544
No 353
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=73.40 E-value=13 Score=35.04 Aligned_cols=58 Identities=21% Similarity=0.219 Sum_probs=42.7
Q ss_pred eEEEEccCCCEEEEEeCC------------CcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEe
Q 017314 218 NALAFSMDGQTIFSGHID------------GNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTS 275 (373)
Q Consensus 218 ~~~~~~~~g~~l~sg~~d------------g~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 275 (373)
--|+|+|.|.++++-..+ ..+.+.+..++++..-+......+++.++|+||++.|...
T Consensus 479 DNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 479 DGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 458999999976653221 2355667777887777777777899999999999877654
No 354
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=70.26 E-value=7.4 Score=39.30 Aligned_cols=37 Identities=14% Similarity=0.218 Sum_probs=32.3
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEe
Q 017314 217 CNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVA 253 (373)
Q Consensus 217 ~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~ 253 (373)
+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 238 ~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 238 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 5667778888999999999999999999999887654
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=69.62 E-value=7.9 Score=39.11 Aligned_cols=37 Identities=14% Similarity=0.267 Sum_probs=32.7
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q 017314 132 SVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 132 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 168 (373)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5677788888899999999999999999999987765
No 356
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.50 E-value=26 Score=32.86 Aligned_cols=59 Identities=19% Similarity=0.184 Sum_probs=42.3
Q ss_pred eeEEEEccCCCEEEEEeC------------CCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEe
Q 017314 217 CNALAFSMDGQTIFSGHI------------DGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTS 275 (373)
Q Consensus 217 ~~~~~~~~~g~~l~sg~~------------dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 275 (373)
...|.|.++|.+.++-.. ...|..++..++++...+......+++.++|+||++.|..+
T Consensus 478 PDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 567999999988773211 12567777777876655554444679999999999987665
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=61.08 E-value=12 Score=36.16 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=28.8
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEEEeCCCCceeeecc
Q 017314 90 GCASILFEYNSARLISGGQDKSIKLWDTNTGSLSSTLY 127 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 127 (373)
.|.++.+ +..+|++-+.|+++|+||+.+++++.+..
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 4565555 47899999999999999999998776543
No 358
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=60.81 E-value=8 Score=39.96 Aligned_cols=37 Identities=14% Similarity=0.218 Sum_probs=31.4
Q ss_pred eeEEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEe
Q 017314 217 CNALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVA 253 (373)
Q Consensus 217 ~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~ 253 (373)
+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 3456667788999999999999999999999887754
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=58.96 E-value=8.3 Score=39.82 Aligned_cols=37 Identities=14% Similarity=0.267 Sum_probs=31.2
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEEcCCCeeEEEe
Q 017314 132 SVLDLAITHDNRSVIAASSSNNLYVWDVNSGRVRHTL 168 (373)
Q Consensus 132 ~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~ 168 (373)
.+.+++..++..++++-+.|+++|||++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455666778899999999999999999999987765
No 360
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=58.89 E-value=84 Score=26.72 Aligned_cols=190 Identities=7% Similarity=0.068 Sum_probs=104.6
Q ss_pred CCCCEEEEeeCCCcEEEEeCCCCceee---------eccccccceEEEEEcCCCCEEEEEeCCCcEEEEEcC---CC---
Q 017314 98 YNSARLISGGQDKSIKLWDTNTGSLSS---------TLYGCLGSVLDLAITHDNRSVIAASSSNNLYVWDVN---SG--- 162 (373)
Q Consensus 98 ~~~~~l~s~s~D~~v~iwd~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~---~~--- 162 (373)
++...+++.+.+|.|+--.+..-+... .+.. ...+..+........++..+..|.++-.... ..
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke-~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLND-GDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCT-TCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCC-CCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 456678889999999987654322111 1121 2334444444455567777888876665542 11
Q ss_pred ---ee---EEEeecCCCcEEEEEEee--CCCCEEEEEeCCCcEEEEEccCCe-------eeeEEeecCceeEEEEccCCC
Q 017314 163 ---RV---RHTLTGHTDKVCAVDVSK--ISSRHVVSAAYDRTLKVWDLHKGY-------CVNTIIFHSNCNALAFSMDGQ 227 (373)
Q Consensus 163 ---~~---~~~~~~h~~~v~~~~~~~--~~~~~~~s~s~D~~i~vwd~~~~~-------~~~~~~~~~~~~~~~~~~~g~ 227 (373)
.+ ...+. ..+.|..+...+ ....+++..+..|.++.-.+..-. ..-.+.....+..+....++.
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 11 00112 123454443222 135678889999999988774321 111111123344444444456
Q ss_pred EEEEEeCCCcEEEEECCC-------CeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEcccc
Q 017314 228 TIFSGHIDGNLRLWDIQT-------GKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSL 289 (373)
Q Consensus 228 ~l~sg~~dg~i~iwd~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~ 289 (373)
.++..+.+|.+..++... .+-+.-+.......+.++..-+++..++..+..+..+..++...
T Consensus 164 ~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 164 KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 788889999988887642 11122222222245566655555667888888898888887654
No 361
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=58.77 E-value=79 Score=26.35 Aligned_cols=157 Identities=9% Similarity=0.073 Sum_probs=85.5
Q ss_pred CCcEEEEEEeeC-CCCEEEEEeCCCcEEEEEccCCe------eeeEEeecCceeEEEEccCCCEEEEEeCCCcEEEEECC
Q 017314 172 TDKVCAVDVSKI-SSRHVVSAAYDRTLKVWDLHKGY------CVNTIIFHSNCNALAFSMDGQTIFSGHIDGNLRLWDIQ 244 (373)
Q Consensus 172 ~~~v~~~~~~~~-~~~~~~s~s~D~~i~vwd~~~~~------~~~~~~~~~~~~~~~~~~~g~~l~sg~~dg~i~iwd~~ 244 (373)
...|..+-. .. +..+++..+.+|.++-..+..-. ..-.+.....+..+........++..+..|.+..++..
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 445555533 21 35689999999999998865421 11111222334444445556678888899998877642
Q ss_pred C-------CeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceee-------eeeecCCeeecCeeeeE
Q 017314 245 T-------GKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCG-------SLRATGNRVASNWSRSC 310 (373)
Q Consensus 245 ~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~-------~~~~~~~~~~~~~~~~~ 310 (373)
. .+-+.-+.......|.++...+++..++..+..+..+...+....... .+ .....+. ....
T Consensus 146 eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv---~~~~ 221 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLV---DLIP 221 (276)
T ss_dssp GSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEE---EEEE
T ss_pred hCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEE---EEEE
Confidence 1 111111211222455555555566788888899998888875443211 11 1111111 1111
Q ss_pred ECCCCcEEEEEeCCCcEEE--EEccC
Q 017314 311 ISPDESYVAAGSADGSVYI--WSISK 334 (373)
Q Consensus 311 ~s~~~~~l~sgs~Dg~i~i--wd~~~ 334 (373)
.. ++..++..+.+|.+.. ++...
T Consensus 222 ~~-~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 222 IK-EEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp ES-SEEEEEEEETTSCEEEEEEEGGG
T ss_pred eC-CCCEEEEEcCCCeEEEeeeCHHH
Confidence 22 3345666777777777 76543
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=58.46 E-value=34 Score=32.33 Aligned_cols=55 Identities=16% Similarity=0.074 Sum_probs=38.0
Q ss_pred eEECCCCcEEEEEeCC----------C--cEEEEEccCceEEEEeccCC-ccEEEEEEcCCCCcEEEE
Q 017314 309 SCISPDESYVAAGSAD----------G--SVYIWSISKADIVRTLKEHT-APVLSCSWSGLGKPLASA 363 (373)
Q Consensus 309 ~~~s~~~~~l~sgs~D----------g--~i~iwd~~~~~~~~~l~~h~-~~V~~~~~s~~g~~l~s~ 363 (373)
++|+|.|.+++.-..+ + .+.+.+..++++...+.++. .+++.++|+||++.|...
T Consensus 481 L~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 5789999866542211 1 24555666777777777654 689999999999977654
No 363
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.36 E-value=31 Score=32.35 Aligned_cols=56 Identities=13% Similarity=0.025 Sum_probs=38.3
Q ss_pred eeEECCCCcEEE-EEeC-----------CCcEEEEEccCceEEEEeccC-CccEEEEEEcCCCCcEEEE
Q 017314 308 RSCISPDESYVA-AGSA-----------DGSVYIWSISKADIVRTLKEH-TAPVLSCSWSGLGKPLASA 363 (373)
Q Consensus 308 ~~~~s~~~~~l~-sgs~-----------Dg~i~iwd~~~~~~~~~l~~h-~~~V~~~~~s~~g~~l~s~ 363 (373)
-++|+++|.+.+ +=.. ...|+.++..++++...+.+. ...++.++||||++.|..+
T Consensus 480 nL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 480 GLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred ceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 467888888766 4221 114666677778776666554 3578999999999977654
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=58.27 E-value=14 Score=35.77 Aligned_cols=32 Identities=13% Similarity=0.330 Sum_probs=27.8
Q ss_pred ccCCCEEEEEeCCCcEEEEECCCCeeeEEEec
Q 017314 223 SMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAA 254 (373)
Q Consensus 223 ~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 254 (373)
.++..++++-+.|+++|+||+.+++++.+...
T Consensus 228 ~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 228 LFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 44678999999999999999999998877655
No 365
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=57.65 E-value=46 Score=23.33 Aligned_cols=25 Identities=24% Similarity=0.287 Sum_probs=15.4
Q ss_pred EEEEEcCCCCEEEEeeCCCeEEEEEcc
Q 017314 261 TSISLSRSGNIILTSGRDNLHNLFDIR 287 (373)
Q Consensus 261 ~~~~~~~~~~~l~s~~~d~~i~~~d~~ 287 (373)
..+.+..+|++++.... +.+ +|...
T Consensus 59 ~~l~l~~dGNLVl~d~~-~~~-iW~S~ 83 (113)
T 3mez_B 59 CFMRLGHSGELDITDDR-LNT-VFVSN 83 (113)
T ss_dssp CEEEECTTSCEEEECTT-SCE-EEECS
T ss_pred EEEEEeCCCcEEEECCC-CCE-EEECC
Confidence 45677888888776543 333 67543
No 366
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=57.55 E-value=1.1e+02 Score=27.72 Aligned_cols=52 Identities=15% Similarity=0.119 Sum_probs=34.2
Q ss_pred cEEEEEEcCCCC-EEEEeeCCCcEEEEeCCCCc---eeeec----c-c----cccceEEEEEcCC
Q 017314 90 GCASILFEYNSA-RLISGGQDKSIKLWDTNTGS---LSSTL----Y-G----CLGSVLDLAITHD 141 (373)
Q Consensus 90 ~v~~~~~~~~~~-~l~s~s~D~~v~iwd~~~~~---~~~~~----~-~----~~~~v~~~~~~~~ 141 (373)
.-+.|+|.|||+ +|+.+...|.|++++..... .+..+ . + .......++|+|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 346789999996 56667889999999754321 11111 1 1 1346788999996
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=51.70 E-value=1.3e+02 Score=26.58 Aligned_cols=167 Identities=12% Similarity=0.098 Sum_probs=91.6
Q ss_pred cEEEEEccCC--eeeeEEeecC-------ceeEEEEc---cC----CCEEEEE-eCCCcEEEEECCCCeeeEEEec----
Q 017314 196 TLKVWDLHKG--YCVNTIIFHS-------NCNALAFS---MD----GQTIFSG-HIDGNLRLWDIQTGKLLSEVAA---- 254 (373)
Q Consensus 196 ~i~vwd~~~~--~~~~~~~~~~-------~~~~~~~~---~~----g~~l~sg-~~dg~i~iwd~~~~~~~~~~~~---- 254 (373)
+|-+||+.++ +.++.+..+. ..+.+.+. |+ +.+++.+ +..+-|-++|+.+++.-+....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5667888888 8877776642 25677776 32 3455444 3467799999998875543310
Q ss_pred c----------c---ccceEEEEEcCC----CCEEEEeeCCCeEEEEEccc-----cceeeeeeecCCee-ecCeeeeEE
Q 017314 255 H----------S---LAAVTSISLSRS----GNIILTSGRDNLHNLFDIRS-----LEVCGSLRATGNRV-ASNWSRSCI 311 (373)
Q Consensus 255 ~----------~---~~~v~~~~~~~~----~~~l~s~~~d~~i~~~d~~~-----~~~~~~~~~~~~~~-~~~~~~~~~ 311 (373)
. . ...+..|+++|+ ++.|.=+.-.+. ++|.+.+ ......+...+... ...-...++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 0 0 135778899987 665554433321 2343321 11111111111110 011112346
Q ss_pred C-CCCcEEEEEeCCCcEEEEEccC-c---eEEEEe-ccC-CccEEEEEEcCCCCcEEEE
Q 017314 312 S-PDESYVAAGSADGSVYIWSISK-A---DIVRTL-KEH-TAPVLSCSWSGLGKPLASA 363 (373)
Q Consensus 312 s-~~~~~l~sgs~Dg~i~iwd~~~-~---~~~~~l-~~h-~~~V~~~~~s~~g~~l~s~ 363 (373)
+ .+|.++++--....|..|+..+ . .....+ +.. -..+.++++.++|..-+..
T Consensus 283 D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 283 DPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp CTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred eCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 4 5788888888888999999875 1 112222 222 2246788888887644444
No 368
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=48.19 E-value=1.4e+02 Score=26.09 Aligned_cols=225 Identities=15% Similarity=0.186 Sum_probs=104.5
Q ss_pred CCEEEEEeCCCcEEEEEcCCC-e-------eE---EEeec-CCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCC----
Q 017314 142 NRSVIAASSSNNLYVWDVNSG-R-------VR---HTLTG-HTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKG---- 205 (373)
Q Consensus 142 ~~~l~s~s~d~~i~iwd~~~~-~-------~~---~~~~~-h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~---- 205 (373)
....+.-..|+.|+.|-.+.. + .. ..+.. ....+..+++.. ...+.+.-..||.|..|-....
T Consensus 62 ~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG 140 (389)
T 3kci_A 62 EQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLG 140 (389)
T ss_dssp TTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTTC
T ss_pred CCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCC
Confidence 345555677888888864321 1 11 11111 112333344443 4456666788999999965321
Q ss_pred ------eeeeEEe-ecC--ceeEEEEccCCCEEEEEeCCCcEEEEECCCC-e----------eeEEEecccccceEEEEE
Q 017314 206 ------YCVNTII-FHS--NCNALAFSMDGQTIFSGHIDGNLRLWDIQTG-K----------LLSEVAAHSLAAVTSISL 265 (373)
Q Consensus 206 ------~~~~~~~-~~~--~~~~~~~~~~g~~l~sg~~dg~i~iwd~~~~-~----------~~~~~~~~~~~~v~~~~~ 265 (373)
....... .-. .+..++. -....+.-..||.|..|=.... + ....+.......|..++.
T Consensus 141 ~g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~ 218 (389)
T 3kci_A 141 HGNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIAC 218 (389)
T ss_dssp SSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE
T ss_pred CCCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEE
Confidence 0011111 111 2333333 3445555667889999865321 1 111111111234566665
Q ss_pred cCCCCEEEEeeCCCeEEEEEccccceeee-------eeecCCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCc---
Q 017314 266 SRSGNIILTSGRDNLHNLFDIRSLEVCGS-------LRATGNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKA--- 335 (373)
Q Consensus 266 ~~~~~~l~s~~~d~~i~~~d~~~~~~~~~-------~~~~~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~--- 335 (373)
.....+.+.-..|+.+..|-......++. .+...... .......++......+.-..||.|+.|-....
T Consensus 219 G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~-~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqL 297 (389)
T 3kci_A 219 GSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-TGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRL 297 (389)
T ss_dssp CCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGG-TTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTT
T ss_pred cCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEeccc-CCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCC
Confidence 44335556666788888886543221110 00000000 00001112222333444467899999965321
Q ss_pred --------eEEEEecc-CCccEEEEEEcCCCCcEEEEeCCCeEEEc
Q 017314 336 --------DIVRTLKE-HTAPVLSCSWSGLGKPLASADKNGVVCVW 372 (373)
Q Consensus 336 --------~~~~~l~~-h~~~V~~~~~s~~g~~l~s~s~dg~i~iW 372 (373)
.....+.. ....|..++-.. .+.+....||.|..|
T Consensus 298 G~g~~~~~~~P~~v~~l~~~~v~~ia~G~--~h~~al~~~G~v~~w 341 (389)
T 3kci_A 298 GHGSDDHVRRPRQVQGLQGKKVIAIATGS--LHCVCCTEDGEVYTW 341 (389)
T ss_dssp CSSSCCCEEEEEECGGGTTCCEEEEEECS--SEEEEEETTCCEEEE
T ss_pred CCCCCccccCCeEeccCCCCCEEEEEecc--CeEEEECCCCCEEEe
Confidence 01111221 123466666543 344455678888887
No 369
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=46.28 E-value=1.5e+02 Score=25.81 Aligned_cols=63 Identities=6% Similarity=0.073 Sum_probs=31.6
Q ss_pred ceeEEEEccC-CCEEEEEeCCCcEEEEECCCCeeeEEEecc-c-----------ccceEEEEEcCC-CCEEEEeeCCC
Q 017314 216 NCNALAFSMD-GQTIFSGHIDGNLRLWDIQTGKLLSEVAAH-S-----------LAAVTSISLSRS-GNIILTSGRDN 279 (373)
Q Consensus 216 ~~~~~~~~~~-g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~-----------~~~v~~~~~~~~-~~~l~s~~~d~ 279 (373)
.+.++.+.|. ...|+.+..++.|...+ ..++.-..+... . ...+.++.++|. ...|..+...+
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g 254 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG 254 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEEES-STTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe
Confidence 3567888873 44455555444443332 222222222110 0 124888999986 35555555544
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=37.42 E-value=1.8e+02 Score=24.16 Aligned_cols=152 Identities=11% Similarity=0.023 Sum_probs=85.1
Q ss_pred cEEEEEEcCCCCEEEEeeCCCcEEE---EeCCCCceeeeccccccceEEEEEcC-CCCEEEEEeCCCcEEEEEcCCC---
Q 017314 90 GCASILFEYNSARLISGGQDKSIKL---WDTNTGSLSSTLYGCLGSVLDLAITH-DNRSVIAASSSNNLYVWDVNSG--- 162 (373)
Q Consensus 90 ~v~~~~~~~~~~~l~s~s~D~~v~i---wd~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~--- 162 (373)
.+..+........|+--+.+|.++- |++..+.....+. ....|..+.... +...++.++.+|.++...+..-
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~ 103 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYK 103 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTC
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhh
Confidence 4444444444556666677777654 3333221111122 234555554321 4678999999999999886542
Q ss_pred ---eeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccC---------CeeeeEEeecCceeEEEEccCCCEEE
Q 017314 163 ---RVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHK---------GYCVNTIIFHSNCNALAFSMDGQTIF 230 (373)
Q Consensus 163 ---~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~g~~l~ 230 (373)
.....++. .+.+..+.... ....++..+..|.+..++... |...-.+.....+..+...+++..++
T Consensus 104 ~~G~~~i~lke-gD~l~~~~~~~-~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll 181 (276)
T 3no0_A 104 AQGMPIIKLTE-GDEVVSIASSV-DETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLL 181 (276)
T ss_dssp STTEECSCCCT-TCCEEEEEECC-SSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEE
T ss_pred cCCeEEEecCC-CCEEEEEEEeC-CCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEE
Confidence 21222332 34555544433 345788888899888777532 11111111123355544445667888
Q ss_pred EEeCCCcEEEEECC
Q 017314 231 SGHIDGNLRLWDIQ 244 (373)
Q Consensus 231 sg~~dg~i~iwd~~ 244 (373)
..+..|.++...+.
T Consensus 182 ~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 182 VITAKGRVKKISHE 195 (276)
T ss_dssp EEETTSCEEEEEGG
T ss_pred EEeCCCcEEEeEHH
Confidence 99999999888763
No 371
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=32.34 E-value=2.6e+02 Score=24.57 Aligned_cols=186 Identities=13% Similarity=0.143 Sum_probs=97.7
Q ss_pred CcEEEEEEcCCCCE-EEEeeC-C-------------CcEEEEeCCCC--ceeeeccc------cccceEEEEEc---CC-
Q 017314 89 GGCASILFEYNSAR-LISGGQ-D-------------KSIKLWDTNTG--SLSSTLYG------CLGSVLDLAIT---HD- 141 (373)
Q Consensus 89 ~~v~~~~~~~~~~~-l~s~s~-D-------------~~v~iwd~~~~--~~~~~~~~------~~~~v~~~~~~---~~- 141 (373)
-.|..+.....+.+ ++=.|. + -.|.+||+.++ ++++.+.- ....+.++++. ++
T Consensus 87 vsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 87 TSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKG 166 (381)
T ss_dssp SCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTT
T ss_pred EEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCC
Confidence 35677777766653 222221 1 25789999999 87765432 13457778877 22
Q ss_pred ---CCEEEEEe-CCCcEEEEEcCCCeeEEEeecC------------------CCcEEEEEEeeCC---CCEEEEEeCCCc
Q 017314 142 ---NRSVIAAS-SSNNLYVWDVNSGRVRHTLTGH------------------TDKVCAVDVSKIS---SRHVVSAAYDRT 196 (373)
Q Consensus 142 ---~~~l~s~s-~d~~i~iwd~~~~~~~~~~~~h------------------~~~v~~~~~~~~~---~~~~~s~s~D~~ 196 (373)
+.+++.+. ....|.|+|+.+++..+.+..+ ...+..++++|.. .+.+.-+...+
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss- 245 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA- 245 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-
T ss_pred CCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-
Confidence 34444443 4678999999998766554211 1234455555421 22333222221
Q ss_pred EEEEEccC-----C---eeeeEEeec---CceeEEEEc-cCCCEEEEEeCCCcEEEEECCC-C---eeeEEEe-cccccc
Q 017314 197 LKVWDLHK-----G---YCVNTIIFH---SNCNALAFS-MDGQTIFSGHIDGNLRLWDIQT-G---KLLSEVA-AHSLAA 259 (373)
Q Consensus 197 i~vwd~~~-----~---~~~~~~~~~---~~~~~~~~~-~~g~~l~sg~~dg~i~iwd~~~-~---~~~~~~~-~~~~~~ 259 (373)
-++|-+.+ . ..++.+-.. +....+++. .+|..+++--....|..|+..+ . +....+. ......
T Consensus 246 ~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~ 325 (381)
T 3q6k_A 246 IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVF 325 (381)
T ss_dssp SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCS
T ss_pred CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccc
Confidence 12222211 1 111111111 223455665 5677777777788899999875 1 1122221 112245
Q ss_pred eEEEEEcCCCCEEEEe
Q 017314 260 VTSISLSRSGNIILTS 275 (373)
Q Consensus 260 v~~~~~~~~~~~l~s~ 275 (373)
...+++.++|.+.+..
T Consensus 326 pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 326 GTDISVDSKGGLWFMS 341 (381)
T ss_dssp EEEEEECTTSCEEEEE
T ss_pred cCeEEECCCCeEEEEE
Confidence 7778887777655554
No 372
>2oqq_A Transcription factor HY5; homodimer leucine zipper; 2.00A {Arabidopsis thaliana}
Probab=29.81 E-value=22 Score=19.88 Aligned_cols=19 Identities=26% Similarity=0.400 Sum_probs=12.2
Q ss_pred CchhhHhHHHHhHHHHHHH
Q 017314 1 MTMKAKNAEAENKMLVDRW 19 (373)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~ 19 (373)
||.|++.++..+..|.++.
T Consensus 8 LE~r~k~le~~naeLEerv 26 (42)
T 2oqq_A 8 LENRVKDLENKNSELEERL 26 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4666766666666666653
No 373
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=28.45 E-value=2.7e+02 Score=23.51 Aligned_cols=151 Identities=9% Similarity=0.069 Sum_probs=86.6
Q ss_pred EEEEEEcCCCCEEEEeeCCCcEEEEeCCC---C------cee---eeccccccceEEEEEcC---CCCEEEEEeCCCcEE
Q 017314 91 CASILFEYNSARLISGGQDKSIKLWDTNT---G------SLS---STLYGCLGSVLDLAITH---DNRSVIAASSSNNLY 155 (373)
Q Consensus 91 v~~~~~~~~~~~l~s~s~D~~v~iwd~~~---~------~~~---~~~~~~~~~v~~~~~~~---~~~~l~s~s~d~~i~ 155 (373)
+..+........++..+..|.++-..... . ..+ ..+.. ...|..+...+ ++.+++.++..|.++
T Consensus 49 l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~k 127 (312)
T 1suu_A 49 IVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIA 127 (312)
T ss_dssp EEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEE
T ss_pred EEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEE
Confidence 33444444556777788888877665431 1 110 01111 22344443322 466888999999999
Q ss_pred EEEcCC-------CeeEEEeecCCCcEEEEEEeeCCCCEEEEEeCCCcEEEEEccCC----e---eeeEE--eecCceeE
Q 017314 156 VWDVNS-------GRVRHTLTGHTDKVCAVDVSKISSRHVVSAAYDRTLKVWDLHKG----Y---CVNTI--IFHSNCNA 219 (373)
Q Consensus 156 iwd~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~~~s~s~D~~i~vwd~~~~----~---~~~~~--~~~~~~~~ 219 (373)
...+.. |.....+.. .+.+..+.... ....++..+.+|.+..+....- + -+..+ .....+..
T Consensus 128 r~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~-~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~ 205 (312)
T 1suu_A 128 RFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVF-KDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVK 205 (312)
T ss_dssp EEEGGGGCC----CEECBCCCT-TCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEE
T ss_pred EEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeC-CCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEE
Confidence 887742 222223333 45565555443 3557888899999988876431 1 11111 11233455
Q ss_pred EEEccCCCEEEEEeCCCcEEEEECC
Q 017314 220 LAFSMDGQTIFSGHIDGNLRLWDIQ 244 (373)
Q Consensus 220 ~~~~~~g~~l~sg~~dg~i~iwd~~ 244 (373)
+..-.++..+++.+..|..+..++.
T Consensus 206 ~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 206 VLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEECCCCeEEEEECCCceEEEEHH
Confidence 5444556678888999998888874
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=28.39 E-value=2.8e+02 Score=23.67 Aligned_cols=261 Identities=13% Similarity=0.127 Sum_probs=124.3
Q ss_pred CEEEEeeCCCcEEEEeCCCCc---------eeeeccccccceEEEEEcCCCCEEEEEeCCCcEE---EEEcCC------C
Q 017314 101 ARLISGGQDKSIKLWDTNTGS---------LSSTLYGCLGSVLDLAITHDNRSVIAASSSNNLY---VWDVNS------G 162 (373)
Q Consensus 101 ~~l~s~s~D~~v~iwd~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~---iwd~~~------~ 162 (373)
..+++-+.+|.||--.+.+.+ ....++ ....+..+........|+.-+..|.++ +|++.. |
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G 82 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARG 82 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCC
Confidence 456777888888865432211 001111 122344343334444555555555444 344432 2
Q ss_pred eeEEE---eecCCCcEEEEEEeeC--CCCEEEEEeCCCcEEEEEccCCee-------eeEEeecCceeEEEEccCCCEEE
Q 017314 163 RVRHT---LTGHTDKVCAVDVSKI--SSRHVVSAAYDRTLKVWDLHKGYC-------VNTIIFHSNCNALAFSMDGQTIF 230 (373)
Q Consensus 163 ~~~~~---~~~h~~~v~~~~~~~~--~~~~~~s~s~D~~i~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~g~~l~ 230 (373)
.++.. +. ....|..+..... +..+++..+.+|.++--.+..-.. .-.+.....+..+........|+
T Consensus 83 ~~i~~~l~l~-~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~il 161 (327)
T 3uc1_A 83 QHVANLLAFQ-PEERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLL 161 (327)
T ss_dssp EEHHHHTTCC-TTCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEE
T ss_pred EEHHHccCCC-CCCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEE
Confidence 22111 22 2344555433221 367899999999999887653211 11111223344444444556788
Q ss_pred EEeCCCcEEEEECC--C----Ce---eeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEccccceeee-------
Q 017314 231 SGHIDGNLRLWDIQ--T----GK---LLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDIRSLEVCGS------- 294 (373)
Q Consensus 231 sg~~dg~i~iwd~~--~----~~---~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~~~~~~~~~------- 294 (373)
..+..|.+..+... . ++ -+.-+.......|.++...+.+..++..+..+.++.-.+..+.....
T Consensus 162 l~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~ 241 (327)
T 3uc1_A 162 LVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLT 241 (327)
T ss_dssp EEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEES
T ss_pred EEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEE
Confidence 88889988777665 2 11 11111112224566666666677889999999998887654432211
Q ss_pred eeec--CCeeecCeeeeEECCCCcEEEEEeCCCcEEEEEccCceE-------EEEec-cCCccEEEEEEcCC-CCcEEEE
Q 017314 295 LRAT--GNRVASNWSRSCISPDESYVAAGSADGSVYIWSISKADI-------VRTLK-EHTAPVLSCSWSGL-GKPLASA 363 (373)
Q Consensus 295 ~~~~--~~~~~~~~~~~~~s~~~~~l~sgs~Dg~i~iwd~~~~~~-------~~~l~-~h~~~V~~~~~s~~-g~~l~s~ 363 (373)
+... ...+. ...... +...++..+.+|.+.-++...-.. +..++ .....|.++..-+. ...+.+.
T Consensus 242 ~~l~~~~d~lv---~~~~~~-~~~~i~l~T~~G~~ir~~~~~i~~~gR~a~GV~~i~l~~~d~vv~~~~~~~~~~~~~~~ 317 (327)
T 3uc1_A 242 VMYDRRRGRLV---GALIVD-DDSELYAVTSGGGVIRTAARQVRKAGRQTKGVRLMNLGEGDTLLAIARNAEESGDDNAV 317 (327)
T ss_dssp SCCCTTTCSEE---EEEEEC-TTCEEEEEEGGGCEEEEEGGGSCBCCTTSCCEECTTCCTTCCEEEEEECC---------
T ss_pred EEecCCCCeEE---EEEEeC-CCccEEEEcCCCeEEEEehhhccccCCCCCCeEeEecCCCCEEEEEEEcCCCcceEEEE
Confidence 1110 11111 111222 344566677777777776643211 11111 12345666665543 3456666
Q ss_pred eCCC
Q 017314 364 DKNG 367 (373)
Q Consensus 364 s~dg 367 (373)
+.+|
T Consensus 318 ~~~g 321 (327)
T 3uc1_A 318 DANG 321 (327)
T ss_dssp ----
T ss_pred ecCC
Confidence 6655
No 375
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=23.01 E-value=1.7e+02 Score=27.18 Aligned_cols=66 Identities=11% Similarity=0.138 Sum_probs=40.5
Q ss_pred eEEEEccCCC--EEEEEeCCCcEEEEECCCC----eeeEEEeccc-ccceE-EEEEcCCCCEEEEeeCCCeEEE
Q 017314 218 NALAFSMDGQ--TIFSGHIDGNLRLWDIQTG----KLLSEVAAHS-LAAVT-SISLSRSGNIILTSGRDNLHNL 283 (373)
Q Consensus 218 ~~~~~~~~g~--~l~sg~~dg~i~iwd~~~~----~~~~~~~~~~-~~~v~-~~~~~~~~~~l~s~~~d~~i~~ 283 (373)
++++....+. .++.|+.+|.|.-.-+... ..+.++.... ..+|. .+.+++++.+|..++..+.+++
T Consensus 403 T~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 403 TSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred EEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4444444333 4668999998765544322 2233333222 34674 8899999999999988876654
No 376
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=22.92 E-value=1.9e+02 Score=26.44 Aligned_cols=55 Identities=15% Similarity=0.173 Sum_probs=36.9
Q ss_pred EEEEEeCCCcEEEEEcc-Cce-------EEEEec--cCCccEEEEEEcCCCCcEEEEeCCCeEEE
Q 017314 317 YVAAGSADGSVYIWSIS-KAD-------IVRTLK--EHTAPVLSCSWSGLGKPLASADKNGVVCV 371 (373)
Q Consensus 317 ~l~sgs~Dg~i~iwd~~-~~~-------~~~~l~--~h~~~V~~~~~s~~g~~l~s~s~dg~i~i 371 (373)
.+..|+.+|.|.=.-+. .+. .+..+. ....+|..+.+++++++|..++.++.++|
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 36678999976433322 211 223333 23578999999999999999999987775
No 377
>3a0c_A Mannose/sialic acid-binding lectin; beta-prism II, sugar binding protein; 2.00A {Polygonatum cyrtonema} PDB: 3a0d_A* 3a0e_A*
Probab=22.73 E-value=1.9e+02 Score=19.85 Aligned_cols=54 Identities=19% Similarity=0.372 Sum_probs=26.2
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEECCCCeeeEEEecccccceEEEEEcCCCCEEEEeeCCCeEEEEEc
Q 017314 219 ALAFSMDGQTIFSGHIDGNLRLWDIQTGKLLSEVAAHSLAAVTSISLSRSGNIILTSGRDNLHNLFDI 286 (373)
Q Consensus 219 ~~~~~~~g~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~d~ 286 (373)
.+.+..||+.++.- . .-.+|...+... ..-..+.+..+|++++... ++. .+|.-
T Consensus 23 ~l~~~~dGnlvl~~--~-~~~vW~sn~~~~---------~~~~~l~l~~dGNLVl~~~-~~~-~~W~S 76 (110)
T 3a0c_A 23 RLIMQGDCNFVLYD--S-GKPVWASNTGGL---------GSGCRLTLHNNGNLVIYDQ-SNR-VIWQT 76 (110)
T ss_dssp EEEECTTSCEEEEE--T-TEEEEECCCTTS---------CSSCEEEECTTSCEEEECT-TCC-EEEEC
T ss_pred EEEEcCCCcEEEEE--C-CEEEEECCCCCC---------CCcEEEEEeCCCCEEEECC-CCc-EEEec
Confidence 34555666655432 1 234565543210 1123456677788776643 232 35653
No 378
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=22.18 E-value=5.3e+02 Score=24.80 Aligned_cols=236 Identities=12% Similarity=0.117 Sum_probs=114.0
Q ss_pred EEEE-EcCCCCEEEEe----eCC-CcEEEEeCCCCceeee-cc-cccc------ceEEEEEcCCCCEEEEE---------
Q 017314 92 ASIL-FEYNSARLISG----GQD-KSIKLWDTNTGSLSST-LY-GCLG------SVLDLAITHDNRSVIAA--------- 148 (373)
Q Consensus 92 ~~~~-~~~~~~~l~s~----s~D-~~v~iwd~~~~~~~~~-~~-~~~~------~v~~~~~~~~~~~l~s~--------- 148 (373)
..+. ++|++++++-+ |.| .+|+++|+.+++.+.. +. .... ....++|..++..+++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~ 211 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITS 211 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCc
Confidence 4445 88999866432 233 4699999999876532 22 0000 11223565333333332
Q ss_pred -eCCCcEEEEEcCCCe--eEEEeecCCCcEE-EEEEeeCCCC----EEEEEeCC---CcEEEEEccC--CeeeeEEeecC
Q 017314 149 -SSSNNLYVWDVNSGR--VRHTLTGHTDKVC-AVDVSKISSR----HVVSAAYD---RTLKVWDLHK--GYCVNTIIFHS 215 (373)
Q Consensus 149 -s~d~~i~iwd~~~~~--~~~~~~~h~~~v~-~~~~~~~~~~----~~~s~s~D---~~i~vwd~~~--~~~~~~~~~~~ 215 (373)
+.-..|+.|.+.+.. -...+.+....+. .......... .+++.+.+ ..+.+.|... +. ...+..+.
T Consensus 212 ~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~ 290 (711)
T 4hvt_A 212 SLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMPS 290 (711)
T ss_dssp TSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSCT
T ss_pred CCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecCC
Confidence 122568888876642 2344554444432 2223332221 35554423 3345555542 32 12222222
Q ss_pred ceeEEEEccCCCEEEEE----------eCCCcEEEEECCCCe-------eeEE-EecccccceEEEEEcCCCCEEEEeeC
Q 017314 216 NCNALAFSMDGQTIFSG----------HIDGNLRLWDIQTGK-------LLSE-VAAHSLAAVTSISLSRSGNIILTSGR 277 (373)
Q Consensus 216 ~~~~~~~~~~g~~l~sg----------~~dg~i~iwd~~~~~-------~~~~-~~~~~~~~v~~~~~~~~~~~l~s~~~ 277 (373)
... +..++++.+++.. ...+.|...|+.++. .... +.......+..+.+.++ .++++...
T Consensus 291 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~ 368 (711)
T 4hvt_A 291 DAT-LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYD 368 (711)
T ss_dssp TCE-EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEE
T ss_pred cce-EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEE
Confidence 222 2234455554422 246678888886632 2223 33334456788888875 56777767
Q ss_pred CCe--EEEEEccccc-eeee-eeecCCeeecCeeeeEECCCCc-EEEEEeC---CCcEEEEEcc
Q 017314 278 DNL--HNLFDIRSLE-VCGS-LRATGNRVASNWSRSCISPDES-YVAAGSA---DGSVYIWSIS 333 (373)
Q Consensus 278 d~~--i~~~d~~~~~-~~~~-~~~~~~~~~~~~~~~~~s~~~~-~l~sgs~---Dg~i~iwd~~ 333 (373)
++. +.++|+.++. .... +..... ..+.....++++. ++++.+. -+.++.+|+.
T Consensus 369 ~~~~~l~~~~~~~g~~~~~~~i~lp~~---~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 369 NVVAKVVTFTLENEQWTKPVVLKLPYQ---NAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp TTEEEEEEECEETTEECCCEEECCCST---TCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred CCEEEEEEEECCCCceEEEeccCCCCC---eEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 765 4556654432 1122 211111 1112223445554 4444443 3578888876
No 379
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=21.39 E-value=2.3e+02 Score=27.10 Aligned_cols=55 Identities=16% Similarity=0.262 Sum_probs=36.4
Q ss_pred EEEEEeCCCcEE-EEEccCce-------EEEEec--cCCccEEEEEEcCCCCcEEEEeCCCeEEE
Q 017314 317 YVAAGSADGSVY-IWSISKAD-------IVRTLK--EHTAPVLSCSWSGLGKPLASADKNGVVCV 371 (373)
Q Consensus 317 ~l~sgs~Dg~i~-iwd~~~~~-------~~~~l~--~h~~~V~~~~~s~~g~~l~s~s~dg~i~i 371 (373)
.+..|+.+|.|. +.....+. .+..++ ....+|..+.+++++++|..++.++.++|
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 356788898763 33222211 222222 34568999999999999999999988775
No 380
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.79 E-value=2.9e+02 Score=25.31 Aligned_cols=56 Identities=16% Similarity=0.216 Sum_probs=36.4
Q ss_pred EEEEEeCCCcEEEEEC-CCC-------eeeEEEecc-cccceEEEEEcCCCCEEEEeeCCCeEEE
Q 017314 228 TIFSGHIDGNLRLWDI-QTG-------KLLSEVAAH-SLAAVTSISLSRSGNIILTSGRDNLHNL 283 (373)
Q Consensus 228 ~l~sg~~dg~i~iwd~-~~~-------~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~i~~ 283 (373)
.++.|+.+|.|.-.-+ ..+ ..+.++... ...+|..+.++++..+|..++.++..++
T Consensus 423 V~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~~v 487 (495)
T 1q47_A 423 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 487 (495)
T ss_dssp EEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEEEE
Confidence 3567999998754333 221 123344332 2367899999999999999988887665
Done!