Query 017317
Match_columns 373
No_of_seqs 242 out of 2293
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 12:29:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017317.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/017317hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 1.4E-32 4.7E-37 252.7 29.9 272 74-372 16-313 (322)
2 3sre_A PON1, serum paraoxonase 100.0 5.3E-27 1.8E-31 215.7 29.2 273 70-370 43-355 (355)
3 3dr2_A Exported gluconolactona 100.0 1.9E-26 6.6E-31 210.0 30.8 257 67-371 36-305 (305)
4 3e5z_A Putative gluconolactona 99.9 1.2E-24 4E-29 196.9 31.2 256 67-372 19-286 (296)
5 3g4e_A Regucalcin; six bladed 99.9 2.8E-23 9.6E-28 188.3 29.4 245 70-362 6-263 (297)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 3.5E-23 1.2E-27 188.2 28.3 261 68-371 10-298 (314)
7 2p4o_A Hypothetical protein; p 99.9 5.7E-21 1.9E-25 173.9 30.8 225 77-362 32-279 (306)
8 4hw6_A Hypothetical protein, I 99.9 6.8E-21 2.3E-25 181.4 28.6 240 75-372 137-433 (433)
9 2ghs_A AGR_C_1268P; regucalcin 99.9 3.4E-20 1.2E-24 170.3 30.8 243 67-363 39-294 (326)
10 1q7f_A NHL, brain tumor CG1071 99.9 3.6E-20 1.2E-24 166.4 29.6 237 74-372 27-280 (286)
11 2dg1_A DRP35, lactonase; beta 99.9 4.9E-20 1.7E-24 169.1 29.8 248 76-371 44-315 (333)
12 1rwi_B Serine/threonine-protei 99.9 2.1E-20 7.1E-25 166.1 25.3 232 78-372 25-264 (270)
13 2qc5_A Streptogramin B lactona 99.9 6.2E-19 2.1E-23 158.6 32.3 232 76-371 19-259 (300)
14 2qc5_A Streptogramin B lactona 99.9 3.8E-19 1.3E-23 160.0 30.1 230 76-371 61-299 (300)
15 2z2n_A Virginiamycin B lyase; 99.9 1E-18 3.4E-23 157.1 32.6 232 76-371 14-254 (299)
16 3tc9_A Hypothetical hydrolase; 99.9 1.2E-19 4.1E-24 172.8 27.2 240 75-372 135-430 (430)
17 2z2n_A Virginiamycin B lyase; 99.9 6.1E-19 2.1E-23 158.6 30.2 232 76-372 56-295 (299)
18 3hrp_A Uncharacterized protein 99.9 1.2E-18 4E-23 165.0 32.1 238 75-371 129-409 (409)
19 3fvz_A Peptidyl-glycine alpha- 99.8 1.1E-18 3.7E-23 160.4 24.1 242 75-371 22-321 (329)
20 2qe8_A Uncharacterized protein 99.8 1.8E-18 6.3E-23 159.8 24.9 242 68-365 9-314 (343)
21 3a9g_A Putative uncharacterize 99.8 8.3E-18 2.8E-22 155.9 28.2 262 67-372 20-352 (354)
22 2ism_A Putative oxidoreductase 99.8 9.7E-18 3.3E-22 155.5 24.2 209 67-284 22-287 (352)
23 4a2l_A BT_4663, two-component 99.8 3.6E-17 1.2E-21 167.7 27.0 228 79-371 359-613 (795)
24 3kya_A Putative phosphatase; s 99.8 2.4E-16 8.1E-21 150.4 28.3 243 73-373 135-476 (496)
25 3dsm_A Uncharacterized protein 99.8 3.1E-16 1.1E-20 143.9 25.8 212 76-336 83-310 (328)
26 3v64_C Agrin; beta propeller, 99.8 2.9E-16 1E-20 145.3 25.7 190 69-284 66-265 (349)
27 3v64_C Agrin; beta propeller, 99.8 6.8E-16 2.3E-20 142.9 27.9 227 80-369 37-272 (349)
28 3v9f_A Two-component system se 99.8 2.8E-16 9.4E-21 160.8 27.6 230 79-371 315-567 (781)
29 3v65_B Low-density lipoprotein 99.7 2.9E-16 1E-20 147.4 24.6 190 69-284 109-308 (386)
30 1rwi_B Serine/threonine-protei 99.7 2.6E-16 8.8E-21 139.6 22.9 185 75-284 65-254 (270)
31 1ijq_A LDL receptor, low-densi 99.7 5.9E-16 2E-20 141.4 25.6 184 76-284 29-228 (316)
32 1npe_A Nidogen, entactin; glyc 99.7 4.8E-16 1.6E-20 138.2 24.0 202 76-336 35-247 (267)
33 3v9f_A Two-component system se 99.7 2.8E-16 9.6E-21 160.8 25.4 228 79-371 409-655 (781)
34 3v65_B Low-density lipoprotein 99.7 1.4E-15 4.9E-20 142.7 27.3 228 80-370 80-316 (386)
35 1npe_A Nidogen, entactin; glyc 99.7 2.4E-15 8.2E-20 133.7 27.4 219 89-371 3-237 (267)
36 3das_A Putative oxidoreductase 99.7 3.8E-15 1.3E-19 136.3 29.1 212 65-284 21-282 (347)
37 4a2l_A BT_4663, two-component 99.7 5.3E-16 1.8E-20 159.1 25.9 226 79-371 408-658 (795)
38 3sov_A LRP-6, low-density lipo 99.7 6.9E-16 2.4E-20 140.8 23.7 184 76-284 34-228 (318)
39 1q7f_A NHL, brain tumor CG1071 99.7 3.4E-16 1.2E-20 140.2 20.8 184 75-283 75-270 (286)
40 1ijq_A LDL receptor, low-densi 99.7 1E-14 3.5E-19 133.1 28.1 221 90-371 4-237 (316)
41 3fvz_A Peptidyl-glycine alpha- 99.7 4.2E-16 1.4E-20 143.0 19.0 192 72-284 86-312 (329)
42 3p5b_L Low density lipoprotein 99.7 4.8E-15 1.7E-19 139.7 24.7 184 76-284 111-310 (400)
43 3sov_A LRP-6, low-density lipo 99.7 2.4E-14 8.3E-19 130.6 25.4 222 87-371 4-237 (318)
44 4a0p_A LRP6, LRP-6, low-densit 99.7 1.4E-14 4.8E-19 143.8 25.5 185 74-284 34-227 (628)
45 3p5b_L Low density lipoprotein 99.7 4.2E-14 1.5E-18 133.2 27.5 223 87-370 83-318 (400)
46 3vgz_A Uncharacterized protein 99.7 1.7E-13 5.7E-18 125.8 30.9 236 77-372 41-303 (353)
47 2g8s_A Glucose/sorbosone dehyd 99.7 1.1E-14 3.8E-19 134.9 22.7 168 67-240 9-219 (353)
48 2p9w_A MAL S 1 allergenic prot 99.7 2.2E-14 7.6E-19 128.8 22.7 189 76-283 12-254 (334)
49 3dsm_A Uncharacterized protein 99.7 5.8E-14 2E-18 128.7 26.2 234 77-371 44-301 (328)
50 3m0c_C LDL receptor, low-densi 99.7 3.7E-14 1.3E-18 143.7 27.0 228 82-370 390-630 (791)
51 3ott_A Two-component system se 99.7 6.7E-15 2.3E-19 150.1 21.7 229 79-371 326-585 (758)
52 3hrp_A Uncharacterized protein 99.7 3.1E-14 1E-18 134.6 24.2 185 76-284 171-400 (409)
53 3hxj_A Pyrrolo-quinoline quino 99.6 2.4E-13 8.2E-18 123.9 28.8 217 82-370 103-322 (330)
54 2fp8_A Strictosidine synthase; 99.6 1E-14 3.4E-19 133.3 18.9 179 77-284 80-303 (322)
55 3s94_A LRP-6, low-density lipo 99.6 1.7E-14 5.9E-19 143.0 21.9 185 75-284 38-233 (619)
56 3hfq_A Uncharacterized protein 99.6 2.6E-13 8.8E-18 124.8 28.3 241 76-371 39-316 (347)
57 3s94_A LRP-6, low-density lipo 99.6 9E-14 3.1E-18 137.8 26.9 184 76-284 348-541 (619)
58 3ott_A Two-component system se 99.6 3.8E-14 1.3E-18 144.5 23.9 224 79-371 375-625 (758)
59 3e5z_A Putative gluconolactona 99.6 2E-13 6.9E-18 122.8 24.4 178 76-284 68-278 (296)
60 4a0p_A LRP6, LRP-6, low-densit 99.6 1.9E-13 6.7E-18 135.6 25.0 185 76-284 339-539 (628)
61 3m0c_C LDL receptor, low-densi 99.6 2.7E-13 9.3E-18 137.4 26.3 189 70-284 418-622 (791)
62 4hw6_A Hypothetical protein, I 99.6 1.2E-13 4.3E-18 131.2 22.1 184 75-284 180-423 (433)
63 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.4E-13 4.8E-18 124.5 21.6 179 77-283 71-288 (314)
64 1cru_A Protein (soluble quinop 99.6 6.1E-13 2.1E-17 127.0 26.4 171 67-240 18-249 (454)
65 1n7d_A LDL receptor, low-densi 99.6 9.9E-15 3.4E-19 146.9 13.9 184 76-284 405-604 (699)
66 3hxj_A Pyrrolo-quinoline quino 99.6 5.5E-13 1.9E-17 121.4 22.5 218 80-371 63-283 (330)
67 3tc9_A Hypothetical hydrolase; 99.6 3.2E-13 1.1E-17 128.4 21.2 183 76-284 178-420 (430)
68 3dr2_A Exported gluconolactona 99.6 3.4E-13 1.2E-17 122.1 20.3 181 77-284 86-298 (305)
69 3u4y_A Uncharacterized protein 99.6 8.9E-12 3E-16 113.4 29.8 239 76-372 40-304 (331)
70 3g4e_A Regucalcin; six bladed 99.5 3.6E-13 1.2E-17 121.5 18.9 180 77-284 54-263 (297)
71 3vgz_A Uncharacterized protein 99.5 1.8E-11 6.3E-16 112.0 30.2 218 77-361 89-334 (353)
72 1n7d_A LDL receptor, low-densi 99.5 2.4E-13 8.2E-18 136.8 18.6 226 85-371 375-613 (699)
73 3kya_A Putative phosphatase; s 99.5 1.5E-12 5.1E-17 124.3 22.9 183 75-284 184-465 (496)
74 2dg1_A DRP35, lactonase; beta 99.5 3.8E-12 1.3E-16 116.2 24.1 181 77-284 87-301 (333)
75 3no2_A Uncharacterized protein 99.5 2E-11 6.9E-16 109.0 27.3 216 86-362 4-233 (276)
76 3hfq_A Uncharacterized protein 99.5 3.5E-11 1.2E-15 110.4 27.6 188 76-283 85-306 (347)
77 3no2_A Uncharacterized protein 99.5 4.2E-11 1.4E-15 106.9 27.0 224 77-349 37-272 (276)
78 2qe8_A Uncharacterized protein 99.5 1.8E-12 6.2E-17 119.4 18.4 187 74-284 64-311 (343)
79 3u4y_A Uncharacterized protein 99.5 5.3E-11 1.8E-15 108.2 27.3 227 86-372 8-252 (331)
80 1jof_A Carboxy-CIS,CIS-muconat 99.5 1.2E-10 4.3E-15 107.9 29.5 247 76-371 39-340 (365)
81 2ism_A Putative oxidoreductase 99.5 1.5E-11 5.1E-16 113.8 22.7 162 107-284 22-223 (352)
82 3a9g_A Putative uncharacterize 99.4 2.6E-11 9E-16 112.1 22.7 186 76-282 72-330 (354)
83 3qqz_A Putative uncharacterize 99.4 1.4E-10 4.8E-15 101.5 24.8 195 72-284 22-244 (255)
84 1l0q_A Surface layer protein; 99.4 1.4E-09 4.7E-14 101.2 32.2 231 77-371 32-274 (391)
85 2ghs_A AGR_C_1268P; regucalcin 99.4 3.8E-11 1.3E-15 109.8 20.9 178 77-284 90-293 (326)
86 1ri6_A Putative isomerase YBHE 99.4 4.4E-10 1.5E-14 102.2 28.0 186 77-282 38-250 (343)
87 2p4o_A Hypothetical protein; p 99.4 4.6E-11 1.6E-15 108.2 20.4 182 77-284 72-279 (306)
88 3scy_A Hypothetical bacterial 99.4 1.4E-09 4.6E-14 100.4 30.8 239 76-371 49-336 (361)
89 2wg3_C Hedgehog-interacting pr 99.4 8.5E-11 2.9E-15 112.1 22.5 167 67-237 5-242 (463)
90 3das_A Putative oxidoreductase 99.3 8.6E-10 2.9E-14 100.8 25.4 224 108-372 24-292 (347)
91 1ri6_A Putative isomerase YBHE 99.3 1.4E-09 4.7E-14 98.8 26.8 175 87-282 4-197 (343)
92 2iwa_A Glutamine cyclotransfer 99.3 2.5E-10 8.4E-15 100.5 20.2 195 117-371 22-236 (266)
93 1pby_B Quinohemoprotein amine 99.3 1.3E-09 4.6E-14 98.7 25.1 223 78-371 35-309 (337)
94 1jof_A Carboxy-CIS,CIS-muconat 99.3 5.9E-09 2E-13 96.5 28.8 187 89-282 4-212 (365)
95 1nir_A Nitrite reductase; hemo 99.3 5.1E-09 1.7E-13 102.4 29.5 233 83-372 144-402 (543)
96 1l0q_A Surface layer protein; 99.3 6.8E-09 2.3E-13 96.5 28.4 168 89-283 3-178 (391)
97 2iwa_A Glutamine cyclotransfer 99.2 1.5E-09 5.3E-14 95.4 20.9 153 76-249 65-237 (266)
98 3bws_A Protein LP49; two-domai 99.2 7.5E-09 2.6E-13 97.6 27.3 250 78-372 171-432 (433)
99 3nol_A Glutamine cyclotransfer 99.2 4.7E-09 1.6E-13 91.3 21.8 148 79-247 89-254 (262)
100 3scy_A Hypothetical bacterial 99.2 9.5E-09 3.2E-13 94.7 24.8 186 77-283 100-326 (361)
101 2g8s_A Glucose/sorbosone dehyd 99.2 1.7E-09 5.9E-14 99.8 19.7 195 77-283 66-342 (353)
102 1nir_A Nitrite reductase; hemo 99.2 1.2E-08 4.2E-13 99.7 26.6 237 79-372 181-458 (543)
103 3bws_A Protein LP49; two-domai 99.2 2.3E-08 7.8E-13 94.2 26.8 229 77-371 123-389 (433)
104 3nok_A Glutaminyl cyclase; bet 99.1 6.5E-09 2.2E-13 90.5 19.5 148 78-246 97-263 (268)
105 3mbr_X Glutamine cyclotransfer 99.1 1.8E-08 6.2E-13 86.9 21.8 150 78-248 66-234 (243)
106 1jmx_B Amine dehydrogenase; ox 99.1 4E-08 1.4E-12 89.4 25.5 192 78-280 44-312 (349)
107 3qqz_A Putative uncharacterize 99.1 1.1E-07 3.8E-12 83.0 25.9 198 116-372 27-253 (255)
108 1pby_B Quinohemoprotein amine 99.0 4.4E-08 1.5E-12 88.5 22.6 177 90-281 4-192 (337)
109 1qks_A Cytochrome CD1 nitrite 99.0 1.5E-07 5E-12 92.3 27.4 187 77-283 197-409 (567)
110 1cru_A Protein (soluble quinop 99.0 7.1E-09 2.4E-13 98.8 17.5 170 107-284 18-248 (454)
111 3q6k_A 43.2 kDa salivary prote 99.0 4.8E-07 1.6E-11 83.3 27.7 229 77-361 26-343 (381)
112 1qks_A Cytochrome CD1 nitrite 99.0 3.9E-07 1.3E-11 89.2 28.6 229 84-371 163-420 (567)
113 3nol_A Glutamine cyclotransfer 99.0 1.4E-07 4.7E-12 82.1 21.7 155 160-372 43-201 (262)
114 4ery_A WD repeat-containing pr 99.0 2.9E-06 9.8E-11 76.1 31.4 183 74-282 21-211 (312)
115 3c75_H MADH, methylamine dehyd 99.0 1.7E-07 5.9E-12 88.1 23.9 236 88-372 85-402 (426)
116 1jmx_B Amine dehydrogenase; ox 99.0 1.4E-07 4.7E-12 85.8 22.6 158 81-249 4-175 (349)
117 3mbr_X Glutamine cyclotransfer 99.0 4E-07 1.4E-11 78.5 23.7 155 160-372 21-179 (243)
118 1gxr_A ESG1, transducin-like e 98.9 2.7E-06 9.2E-11 76.5 30.3 225 78-370 99-335 (337)
119 3c75_H MADH, methylamine dehyd 98.9 2.5E-07 8.6E-12 87.0 23.7 206 68-283 112-390 (426)
120 2p9w_A MAL S 1 allergenic prot 98.9 5.3E-08 1.8E-12 87.5 18.1 184 78-282 64-303 (334)
121 2ece_A 462AA long hypothetical 98.9 2.5E-07 8.6E-12 86.6 22.5 189 76-281 137-399 (462)
122 3ow8_A WD repeat-containing pr 98.9 1.2E-05 4.1E-10 72.8 33.3 232 74-370 78-319 (321)
123 2ymu_A WD-40 repeat protein; u 98.9 1.6E-06 5.5E-11 84.6 29.1 217 77-359 345-568 (577)
124 2ymu_A WD-40 repeat protein; u 98.9 3.7E-06 1.3E-10 82.1 31.1 179 77-283 304-487 (577)
125 3q7m_A Lipoprotein YFGL, BAMB; 98.9 5.2E-06 1.8E-10 76.7 30.3 238 63-371 26-295 (376)
126 3q7m_A Lipoprotein YFGL, BAMB; 98.9 5.9E-07 2E-11 83.1 23.7 215 87-371 103-336 (376)
127 2ojh_A Uncharacterized protein 98.9 1.5E-06 5.1E-11 76.4 24.6 172 88-281 10-191 (297)
128 3nok_A Glutaminyl cyclase; bet 98.9 4.9E-07 1.7E-11 78.7 20.4 153 160-372 55-210 (268)
129 1k8k_C P40, ARP2/3 complex 41 98.8 5.2E-06 1.8E-10 75.9 28.1 234 78-371 10-273 (372)
130 2ece_A 462AA long hypothetical 98.8 1.5E-06 5.3E-11 81.3 24.1 190 87-284 95-342 (462)
131 2hqs_A Protein TOLB; TOLB, PAL 98.8 2.2E-06 7.6E-11 80.7 25.5 204 78-339 180-398 (415)
132 2z3z_A Dipeptidyl aminopeptida 98.8 2.7E-06 9.3E-11 85.4 27.3 199 77-280 82-328 (706)
133 2mad_H Methylamine dehydrogena 98.8 2.1E-05 7.1E-10 72.9 30.7 245 69-372 61-350 (373)
134 2hqs_A Protein TOLB; TOLB, PAL 98.8 8.9E-06 3E-10 76.5 28.3 160 97-281 159-328 (415)
135 4gqb_B Methylosome protein 50; 98.7 8.3E-06 2.8E-10 74.7 26.4 228 79-371 85-330 (344)
136 1gxr_A ESG1, transducin-like e 98.7 2E-05 6.9E-10 70.7 28.7 181 77-282 52-243 (337)
137 3sjl_D Methylamine dehydrogena 98.7 6.2E-06 2.1E-10 76.3 25.3 239 69-372 73-363 (386)
138 4g56_B MGC81050 protein; prote 98.7 7.1E-07 2.4E-11 82.2 19.1 182 79-280 45-244 (357)
139 1got_B GT-beta; complex (GTP-b 98.7 3.8E-05 1.3E-09 69.9 30.6 185 73-282 52-245 (340)
140 3zwl_B Eukaryotic translation 98.7 2.2E-05 7.6E-10 71.3 28.7 247 77-371 75-345 (369)
141 2oiz_A Aromatic amine dehydrog 98.7 1.9E-06 6.6E-11 79.5 21.3 101 164-276 258-360 (361)
142 1fwx_A Nitrous oxide reductase 98.7 1E-06 3.4E-11 85.3 19.6 192 88-284 102-351 (595)
143 4gqb_B Methylosome protein 50; 98.7 4.1E-06 1.4E-10 76.7 22.9 181 79-280 33-232 (344)
144 2oiz_A Aromatic amine dehydrog 98.7 1.7E-05 5.9E-10 73.1 27.2 89 88-178 16-127 (361)
145 2ecf_A Dipeptidyl peptidase IV 98.7 3.6E-06 1.2E-10 85.0 24.5 137 77-237 37-228 (741)
146 1got_B GT-beta; complex (GTP-b 98.7 1.2E-05 4E-10 73.3 25.7 219 79-361 100-333 (340)
147 2ojh_A Uncharacterized protein 98.7 4.7E-06 1.6E-10 73.2 22.4 180 77-282 42-236 (297)
148 1r5m_A SIR4-interacting protei 98.7 1.3E-05 4.5E-10 74.4 26.5 231 78-371 110-360 (425)
149 3ei3_B DNA damage-binding prot 98.7 1.3E-05 4.6E-10 73.8 25.5 186 76-282 73-270 (383)
150 2vdu_B TRNA (guanine-N(7)-)-me 98.7 2.7E-05 9.3E-10 73.7 27.7 178 80-282 8-259 (450)
151 3zwl_B Eukaryotic translation 98.6 0.0001 3.4E-09 66.9 30.5 185 76-282 32-237 (369)
152 2ecf_A Dipeptidyl peptidase IV 98.6 7.4E-06 2.5E-10 82.7 25.0 198 79-281 111-354 (741)
153 1erj_A Transcriptional repress 98.6 6.5E-05 2.2E-09 69.8 29.6 147 79-249 126-287 (393)
154 4ery_A WD repeat-containing pr 98.6 0.00015 5E-09 64.7 30.8 150 76-249 65-223 (312)
155 3vl1_A 26S proteasome regulato 98.6 2E-05 6.8E-10 73.5 25.8 173 83-281 104-309 (420)
156 2ynn_A Coatomer subunit beta'; 98.6 5.4E-05 1.8E-09 67.7 27.6 150 76-249 13-172 (304)
157 2pm9_A Protein WEB1, protein t 98.6 1.2E-05 4.1E-10 74.7 23.9 237 78-371 69-336 (416)
158 3sre_A PON1, serum paraoxonase 98.6 2.7E-06 9.2E-11 77.9 18.7 183 160-371 50-251 (355)
159 3ow8_A WD repeat-containing pr 98.6 0.00029 1E-08 63.5 31.9 180 76-282 32-225 (321)
160 3sjl_D Methylamine dehydrogena 98.6 1.8E-05 6E-10 73.3 23.7 203 77-337 137-373 (386)
161 4g56_B MGC81050 protein; prote 98.6 1.3E-05 4.5E-10 73.6 22.8 176 79-280 97-286 (357)
162 3o4h_A Acylamino-acid-releasin 98.6 4.3E-06 1.5E-10 82.1 20.5 178 80-283 68-265 (582)
163 1r5m_A SIR4-interacting protei 98.6 2.7E-05 9.1E-10 72.3 24.9 178 77-282 150-349 (425)
164 3mkq_A Coatomer beta'-subunit; 98.6 5.4E-05 1.8E-09 77.0 29.0 181 76-282 13-205 (814)
165 1sq9_A Antiviral protein SKI8; 98.6 4.8E-05 1.7E-09 70.2 26.3 184 77-282 63-310 (397)
166 2aq5_A Coronin-1A; WD40 repeat 98.6 2.1E-05 7.2E-10 73.2 23.8 183 77-281 82-285 (402)
167 1vyh_C Platelet-activating fac 98.6 0.00012 4.1E-09 68.5 29.1 149 77-249 109-265 (410)
168 3s25_A Hypothetical 7-bladed b 98.6 1E-05 3.5E-10 72.6 20.6 214 79-373 57-294 (302)
169 4h5i_A Guanine nucleotide-exch 98.6 1.2E-05 4.1E-10 74.2 21.7 186 79-283 136-332 (365)
170 1mda_H Methylamine dehydrogena 98.5 6.3E-06 2.2E-10 76.1 19.3 203 68-282 59-333 (368)
171 1erj_A Transcriptional repress 98.5 0.00021 7.1E-09 66.4 29.6 180 77-282 65-275 (393)
172 3pe7_A Oligogalacturonate lyas 98.5 2.9E-05 1E-09 71.5 23.6 195 82-281 41-256 (388)
173 1pgu_A Actin interacting prote 98.5 5.4E-05 1.9E-09 74.1 26.8 187 77-282 19-226 (615)
174 3iz6_a 40S ribosomal protein R 98.5 0.00034 1.2E-08 64.5 30.6 259 74-371 64-374 (380)
175 2mad_H Methylamine dehydrogena 98.5 9.1E-05 3.1E-09 68.6 26.3 139 88-247 33-194 (373)
176 4aez_A CDC20, WD repeat-contai 98.5 0.00021 7.1E-09 66.4 28.8 177 78-282 136-322 (401)
177 1mda_H Methylamine dehydrogena 98.5 4.8E-06 1.6E-10 76.9 17.1 88 88-178 32-143 (368)
178 3s25_A Hypothetical 7-bladed b 98.5 4.5E-05 1.5E-09 68.4 22.9 213 82-372 21-255 (302)
179 2z3z_A Dipeptidyl aminopeptida 98.5 5.1E-05 1.8E-09 76.1 25.8 164 97-281 235-418 (706)
180 3b7f_A Glycosyl hydrolase, BNR 98.5 1.2E-05 4E-10 75.1 19.7 176 84-283 19-253 (394)
181 2vdu_B TRNA (guanine-N(7)-)-me 98.5 7.8E-05 2.7E-09 70.5 25.5 152 78-250 104-272 (450)
182 2xyi_A Probable histone-bindin 98.5 6.9E-05 2.4E-09 70.5 25.0 185 77-282 129-341 (430)
183 1vyh_C Platelet-activating fac 98.5 0.00013 4.4E-09 68.3 26.5 226 78-369 152-408 (410)
184 4a9v_A PHOX; hydrolase, beta-p 98.5 1.5E-06 5E-11 83.4 13.0 74 157-236 473-549 (592)
185 3frx_A Guanine nucleotide-bind 98.5 0.00036 1.2E-08 62.7 28.4 183 74-282 15-215 (319)
186 1nr0_A Actin interacting prote 98.5 9.1E-05 3.1E-09 73.2 26.2 186 77-282 19-209 (611)
187 3pe7_A Oligogalacturonate lyas 98.4 3.4E-05 1.2E-09 71.1 21.7 154 81-251 85-275 (388)
188 1tl2_A L10, protein (tachylect 98.4 2.5E-06 8.4E-11 71.8 12.1 157 64-245 28-206 (236)
189 1sq9_A Antiviral protein SKI8; 98.4 0.00031 1.1E-08 64.6 27.9 243 73-371 13-321 (397)
190 3q6k_A 43.2 kDa salivary prote 98.4 6.8E-05 2.3E-09 69.0 22.8 189 76-283 86-343 (381)
191 3dm0_A Maltose-binding peripla 98.4 0.00063 2.2E-08 68.1 32.1 184 77-284 431-623 (694)
192 1k8k_C P40, ARP2/3 complex 41 98.4 0.00021 7.2E-09 65.0 26.0 185 77-284 53-265 (372)
193 3vl1_A 26S proteasome regulato 98.4 4.8E-05 1.7E-09 70.8 21.9 148 79-249 59-212 (420)
194 1xfd_A DIP, dipeptidyl aminope 98.4 1.1E-05 3.9E-10 81.0 18.7 136 79-236 19-191 (723)
195 1yfq_A Cell cycle arrest prote 98.4 9.1E-05 3.1E-09 66.7 23.1 180 77-282 12-213 (342)
196 1pgu_A Actin interacting prote 98.4 0.00045 1.5E-08 67.4 29.5 230 79-371 67-327 (615)
197 4aez_A CDC20, WD repeat-contai 98.4 0.00039 1.3E-08 64.6 27.6 181 79-282 179-368 (401)
198 3dwl_C Actin-related protein 2 98.4 5.7E-06 2E-10 76.1 14.8 149 79-248 14-176 (377)
199 3sfz_A APAF-1, apoptotic pepti 98.4 1.2E-05 4.2E-10 86.0 19.4 182 77-282 1004-1197(1249)
200 3odt_A Protein DOA1; ubiquitin 98.4 0.0005 1.7E-08 60.7 27.1 229 74-371 16-254 (313)
201 1fwx_A Nitrous oxide reductase 98.4 9.1E-06 3.1E-10 78.7 16.3 142 113-277 274-457 (595)
202 4e54_B DNA damage-binding prot 98.4 2.9E-05 1E-09 73.2 19.4 184 79-282 122-315 (435)
203 3i2n_A WD repeat-containing pr 98.4 0.0001 3.4E-09 66.7 22.4 179 78-276 67-272 (357)
204 3frx_A Guanine nucleotide-bind 98.4 0.0013 4.4E-08 59.0 29.8 179 77-283 66-257 (319)
205 3fm0_A Protein CIAO1; WDR39,SG 98.4 0.00026 8.8E-09 64.5 25.0 182 79-282 19-213 (345)
206 2pbi_B Guanine nucleotide-bind 98.4 0.00032 1.1E-08 64.1 25.6 218 79-360 109-346 (354)
207 2aq5_A Coronin-1A; WD40 repeat 98.3 8.6E-05 2.9E-09 69.0 21.7 183 77-279 132-329 (402)
208 2xzm_R RACK1; ribosome, transl 98.3 0.001 3.5E-08 60.2 28.5 184 77-283 77-275 (343)
209 3jrp_A Fusion protein of prote 98.3 0.00039 1.3E-08 63.2 25.8 185 77-282 12-228 (379)
210 3sfz_A APAF-1, apoptotic pepti 98.3 0.00065 2.2E-08 72.6 30.8 185 76-284 615-819 (1249)
211 3mkq_A Coatomer beta'-subunit; 98.3 0.0003 1E-08 71.4 26.6 179 77-282 56-247 (814)
212 3v7d_B Cell division control p 98.3 0.0008 2.7E-08 63.5 27.9 173 81-282 127-329 (464)
213 1yfq_A Cell cycle arrest prote 98.3 0.00011 3.9E-09 66.0 21.1 181 77-281 57-269 (342)
214 3odt_A Protein DOA1; ubiquitin 98.3 0.00082 2.8E-08 59.3 26.3 224 77-371 60-295 (313)
215 3k26_A Polycomb protein EED; W 98.3 0.00067 2.3E-08 61.3 25.9 150 79-250 72-261 (366)
216 3dw8_B Serine/threonine-protei 98.3 0.00058 2E-08 63.9 26.2 186 78-283 30-305 (447)
217 2ynn_A Coatomer subunit beta'; 98.3 0.0015 5E-08 58.1 27.6 231 79-371 58-301 (304)
218 3b7f_A Glycosyl hydrolase, BNR 98.3 6.9E-05 2.4E-09 69.8 19.1 181 78-282 56-298 (394)
219 3azo_A Aminopeptidase; POP fam 98.2 0.00015 5.2E-09 72.0 22.5 178 86-283 88-313 (662)
220 4a11_B DNA excision repair pro 98.2 0.0025 8.6E-08 58.4 28.9 150 77-250 100-277 (408)
221 1nr0_A Actin interacting prote 98.2 0.0019 6.5E-08 63.6 29.6 179 77-282 60-258 (611)
222 2j04_A TAU60, YPL007P, hypothe 98.2 0.00088 3E-08 64.8 25.2 182 77-282 16-243 (588)
223 2pbi_B Guanine nucleotide-bind 98.2 0.0037 1.3E-07 57.0 31.6 183 73-282 61-259 (354)
224 4h5i_A Guanine nucleotide-exch 98.2 0.00011 3.8E-09 67.6 18.3 151 79-249 179-343 (365)
225 3o4h_A Acylamino-acid-releasin 98.1 5.2E-05 1.8E-09 74.3 16.4 170 79-282 112-300 (582)
226 3azo_A Aminopeptidase; POP fam 98.1 0.00035 1.2E-08 69.4 22.6 197 78-283 25-261 (662)
227 1xfd_A DIP, dipeptidyl aminope 98.1 0.00069 2.3E-08 67.9 24.8 199 78-280 62-323 (723)
228 3dm0_A Maltose-binding peripla 98.1 0.00086 2.9E-08 67.1 25.4 180 77-282 383-580 (694)
229 3f3f_A Nucleoporin SEH1; struc 98.1 0.00079 2.7E-08 60.0 22.7 181 73-275 8-226 (351)
230 2ad6_A Methanol dehydrogenase 98.1 0.0023 7.8E-08 62.6 27.5 41 320-362 486-527 (571)
231 4a5s_A Dipeptidyl peptidase 4 98.1 0.00046 1.6E-08 69.7 23.0 169 81-251 66-296 (740)
232 3k26_A Polycomb protein EED; W 98.1 0.0019 6.4E-08 58.3 25.0 158 68-249 10-192 (366)
233 3c5m_A Oligogalacturonate lyas 98.1 0.00023 8E-09 65.4 19.1 187 79-282 38-257 (396)
234 3lrv_A PRE-mRNA-splicing facto 98.1 0.0052 1.8E-07 55.5 29.7 142 117-283 127-280 (343)
235 1k32_A Tricorn protease; prote 98.1 0.00079 2.7E-08 70.8 25.1 142 82-237 343-491 (1045)
236 2ad6_A Methanol dehydrogenase 98.1 0.0039 1.3E-07 61.0 28.3 63 82-146 111-186 (571)
237 2xdw_A Prolyl endopeptidase; a 98.1 0.0031 1.1E-07 63.3 27.8 187 80-283 128-355 (710)
238 3dw8_B Serine/threonine-protei 98.1 0.0016 5.5E-08 60.8 24.1 157 74-250 175-374 (447)
239 3gre_A Serine/threonine-protei 98.0 0.003 1E-07 58.9 25.7 162 69-249 56-245 (437)
240 4a11_B DNA excision repair pro 98.0 0.0017 5.7E-08 59.6 23.3 150 77-249 44-218 (408)
241 2wg3_C Hedgehog-interacting pr 98.0 0.00067 2.3E-08 64.4 20.6 164 108-279 6-237 (463)
242 3dwl_C Actin-related protein 2 98.0 7.2E-05 2.4E-09 68.6 13.3 186 78-284 57-272 (377)
243 2hes_X YDR267CP; beta-propelle 98.0 0.003 1E-07 56.9 24.0 152 77-249 59-230 (330)
244 3ei3_B DNA damage-binding prot 98.0 0.00066 2.3E-08 62.3 19.8 179 79-283 166-372 (383)
245 1kb0_A Quinohemoprotein alcoho 98.0 0.0057 1.9E-07 61.1 27.5 38 320-359 499-537 (677)
246 2oaj_A Protein SNI1; WD40 repe 98.0 0.00064 2.2E-08 70.4 21.2 180 76-283 17-231 (902)
247 4aow_A Guanine nucleotide-bind 98.0 0.0084 2.9E-07 53.4 29.5 183 77-284 87-277 (340)
248 2xbg_A YCF48-like protein; pho 98.0 0.0094 3.2E-07 53.7 26.6 182 78-284 37-225 (327)
249 3i2n_A WD repeat-containing pr 97.9 0.0026 8.7E-08 57.2 22.6 184 70-281 12-230 (357)
250 2xzm_R RACK1; ribosome, transl 97.9 0.011 3.8E-07 53.3 27.8 178 77-282 22-232 (343)
251 3lrv_A PRE-mRNA-splicing facto 97.9 0.0017 5.8E-08 58.8 21.0 172 88-284 49-235 (343)
252 2xbg_A YCF48-like protein; pho 97.9 0.0056 1.9E-07 55.2 24.3 226 80-370 83-320 (327)
253 3iz6_a 40S ribosomal protein R 97.9 0.0017 5.9E-08 59.8 21.1 152 79-249 208-375 (380)
254 3mmy_A MRNA export factor; mRN 97.9 0.0025 8.4E-08 57.5 21.8 99 73-177 36-147 (368)
255 3fm0_A Protein CIAO1; WDR39,SG 97.9 0.0013 4.5E-08 59.7 19.5 145 117-281 18-168 (345)
256 3jro_A Fusion protein of prote 97.9 0.00094 3.2E-08 67.7 20.3 185 77-282 10-226 (753)
257 1w6s_A Methanol dehydrogenase 97.9 0.015 5.2E-07 57.0 28.0 42 318-361 493-535 (599)
258 3jrp_A Fusion protein of prote 97.9 0.003 1E-07 57.2 21.8 185 78-284 57-278 (379)
259 3v7d_B Cell division control p 97.9 0.018 6.3E-07 54.0 29.9 152 76-249 162-341 (464)
260 2pm9_A Protein WEB1, protein t 97.8 0.0011 3.8E-08 61.2 18.6 152 77-250 166-338 (416)
261 1k32_A Tricorn protease; prote 97.8 0.00048 1.6E-08 72.5 17.8 177 78-282 297-491 (1045)
262 1z68_A Fibroblast activation p 97.8 0.00025 8.7E-09 71.2 14.8 129 80-236 19-187 (719)
263 2xyi_A Probable histone-bindin 97.8 0.002 6.8E-08 60.4 19.9 184 77-283 182-399 (430)
264 1tl2_A L10, protein (tachylect 97.8 0.0007 2.4E-08 57.0 14.4 141 117-281 42-199 (236)
265 1kb0_A Quinohemoprotein alcoho 97.8 0.0047 1.6E-07 61.7 23.3 111 87-212 77-204 (677)
266 3amr_A 3-phytase; beta-propell 97.8 0.0032 1.1E-07 57.0 19.8 179 85-284 37-252 (355)
267 2ovr_B FBW7, F-BOX/WD repeat p 97.8 0.025 8.4E-07 52.9 28.1 136 197-372 298-442 (445)
268 2hz6_A Endoplasmic reticulum t 97.8 0.0001 3.4E-09 68.2 10.0 140 83-250 6-150 (369)
269 4aow_A Guanine nucleotide-bind 97.8 0.019 6.4E-07 51.1 27.5 185 73-282 35-234 (340)
270 3mmy_A MRNA export factor; mRN 97.7 0.0039 1.3E-07 56.1 20.2 201 77-282 87-334 (368)
271 2gop_A Trilobed protease; beta 97.7 0.0055 1.9E-07 55.1 20.6 146 78-246 60-250 (347)
272 2j04_B YDR362CP, TAU91; beta p 97.7 0.0033 1.1E-07 60.8 19.6 149 79-249 269-428 (524)
273 3amr_A 3-phytase; beta-propell 97.7 0.0065 2.2E-07 55.0 20.0 133 199-371 102-262 (355)
274 2bkl_A Prolyl endopeptidase; m 97.7 0.011 3.7E-07 59.2 23.7 183 80-282 124-337 (695)
275 1flg_A Protein (quinoprotein e 97.6 0.043 1.5E-06 53.7 26.9 40 319-360 507-547 (582)
276 3iuj_A Prolyl endopeptidase; h 97.6 0.024 8.2E-07 56.7 25.6 177 80-277 132-339 (693)
277 1z68_A Fibroblast activation p 97.6 0.0025 8.7E-08 63.8 18.2 162 79-246 62-284 (719)
278 4e54_B DNA damage-binding prot 97.6 0.0095 3.3E-07 55.8 20.9 148 78-249 166-327 (435)
279 1yiq_A Quinohemoprotein alcoho 97.5 0.053 1.8E-06 54.2 26.7 40 319-360 496-536 (689)
280 3bg1_A Protein SEC13 homolog; 97.5 0.026 8.7E-07 50.3 22.3 150 78-248 15-197 (316)
281 1yr2_A Prolyl oligopeptidase; 97.5 0.03 1E-06 56.4 25.2 184 80-282 166-381 (741)
282 2ovr_B FBW7, F-BOX/WD repeat p 97.5 0.057 1.9E-06 50.4 29.1 221 79-371 162-390 (445)
283 2hes_X YDR267CP; beta-propelle 97.5 0.022 7.4E-07 51.1 21.8 142 121-282 19-172 (330)
284 4gga_A P55CDC, cell division c 97.5 0.058 2E-06 50.0 27.8 226 79-370 150-393 (420)
285 1kv9_A Type II quinohemoprotei 97.4 0.048 1.7E-06 54.3 24.7 41 320-362 480-521 (668)
286 2pm7_B Protein transport prote 97.4 0.029 9.9E-07 49.4 20.8 183 79-282 56-273 (297)
287 2oaj_A Protein SNI1; WD40 repe 97.4 0.012 4E-07 60.9 20.5 150 79-249 61-242 (902)
288 3gre_A Serine/threonine-protei 97.4 0.024 8.3E-07 52.7 20.9 150 78-249 113-292 (437)
289 3c5m_A Oligogalacturonate lyas 97.4 0.022 7.4E-07 51.9 20.0 137 96-251 167-331 (396)
290 3jro_A Fusion protein of prote 97.4 0.015 5.1E-07 58.8 20.3 182 78-281 55-272 (753)
291 2j04_A TAU60, YPL007P, hypothe 97.4 0.0032 1.1E-07 60.9 14.2 135 79-236 132-286 (588)
292 1kv9_A Type II quinohemoprotei 97.4 0.023 7.7E-07 56.7 21.1 111 87-212 66-192 (668)
293 4a5s_A Dipeptidyl peptidase 4 97.3 0.0081 2.8E-07 60.6 17.8 131 81-236 21-189 (740)
294 3f3f_A Nucleoporin SEH1; struc 97.3 0.075 2.6E-06 46.8 24.3 113 117-250 13-144 (351)
295 2xdw_A Prolyl endopeptidase; a 97.3 0.041 1.4E-06 55.1 22.6 104 162-278 127-247 (710)
296 1p22_A F-BOX/WD-repeat protein 97.3 0.11 3.8E-06 48.3 24.7 145 79-249 176-325 (435)
297 1w6s_A Methanol dehydrogenase 97.3 0.12 4.1E-06 50.6 25.2 111 87-212 62-196 (599)
298 3vu4_A KMHSV2; beta-propeller 97.3 0.1 3.5E-06 47.2 24.8 223 77-371 20-270 (355)
299 3bg1_A Protein SEC13 homolog; 97.2 0.048 1.6E-06 48.5 20.1 183 78-281 59-280 (316)
300 1p22_A F-BOX/WD-repeat protein 97.2 0.13 4.5E-06 47.7 26.5 210 86-370 141-363 (435)
301 3zwu_A Alkaline phosphatase PH 97.1 0.007 2.4E-07 58.9 14.3 73 158-235 474-548 (592)
302 4ggc_A P55CDC, cell division c 97.1 0.13 4.5E-06 44.9 26.5 229 79-371 70-314 (318)
303 3vu4_A KMHSV2; beta-propeller 97.1 0.034 1.2E-06 50.4 17.7 134 93-248 155-335 (355)
304 2gop_A Trilobed protease; beta 97.1 0.054 1.9E-06 48.4 18.8 100 162-281 61-187 (347)
305 4a9v_A PHOX; hydrolase, beta-p 97.0 0.0083 2.8E-07 57.7 13.0 124 157-284 381-552 (592)
306 4gga_A P55CDC, cell division c 97.0 0.21 7.3E-06 46.1 30.2 142 81-249 110-261 (420)
307 1flg_A Protein (quinoprotein e 96.9 0.2 6.8E-06 48.9 22.8 112 87-212 68-198 (582)
308 2pm7_B Protein transport prote 96.9 0.2 6.7E-06 43.9 29.2 176 78-275 11-216 (297)
309 2bkl_A Prolyl endopeptidase; m 96.9 0.15 5.3E-06 50.7 21.9 108 161-282 122-246 (695)
310 2j04_B YDR362CP, TAU91; beta p 96.8 0.022 7.6E-07 55.0 14.9 176 79-281 210-415 (524)
311 2oit_A Nucleoporin 214KDA; NH2 96.8 0.042 1.4E-06 51.6 16.3 151 78-249 94-278 (434)
312 1yiq_A Quinohemoprotein alcoho 96.8 0.1 3.4E-06 52.2 19.4 86 197-285 454-539 (689)
313 3iuj_A Prolyl endopeptidase; h 96.7 0.28 9.6E-06 48.9 22.4 105 161-281 130-252 (693)
314 1yr2_A Prolyl oligopeptidase; 96.6 0.21 7.1E-06 50.2 20.6 107 161-281 164-286 (741)
315 4gq1_A NUP37; propeller, trans 96.4 0.49 1.7E-05 43.3 20.5 185 79-284 139-380 (393)
316 2oit_A Nucleoporin 214KDA; NH2 96.4 0.055 1.9E-06 50.8 14.1 104 161-284 94-214 (434)
317 2w18_A PALB2, fancn, partner a 96.3 0.59 2E-05 42.2 19.5 50 197-247 304-355 (356)
318 3zwu_A Alkaline phosphatase PH 96.3 0.081 2.8E-06 51.5 14.6 118 218-360 384-550 (592)
319 1sqj_A OXG-RCBH, oligoxylogluc 96.2 1.3 4.6E-05 44.8 24.2 148 78-244 16-196 (789)
320 3a0f_A Xyloglucanase; beta-pro 95.6 2.3 7.9E-05 42.9 24.6 147 78-244 22-208 (763)
321 2w18_A PALB2, fancn, partner a 95.4 1.5 5.1E-05 39.6 22.4 185 87-282 144-345 (356)
322 4ggc_A P55CDC, cell division c 95.0 1.5 5.3E-05 37.8 26.9 143 80-249 29-181 (318)
323 2cn3_A Xyloglucanase, beta-1,4 94.9 3.5 0.00012 41.3 24.3 99 78-177 24-151 (737)
324 2hz6_A Endoplasmic reticulum t 94.6 0.026 8.9E-07 51.8 4.2 59 170-248 9-67 (369)
325 1k3i_A Galactose oxidase precu 94.5 3.7 0.00013 40.4 20.1 122 82-212 248-383 (656)
326 4gq1_A NUP37; propeller, trans 94.2 3.2 0.00011 37.7 22.7 133 92-248 106-285 (393)
327 2xe4_A Oligopeptidase B; hydro 93.9 1.7 5.9E-05 43.7 16.5 106 161-281 175-289 (751)
328 2be1_A Serine/threonine-protei 92.8 0.59 2E-05 42.1 9.8 109 87-214 10-137 (339)
329 2xe4_A Oligopeptidase B; hydro 91.6 7.2 0.00025 39.1 17.1 147 80-249 177-354 (751)
330 2cn3_A Xyloglucanase, beta-1,4 90.3 15 0.00053 36.6 18.1 118 117-244 24-159 (737)
331 1k3i_A Galactose oxidase precu 89.6 5.7 0.0002 39.0 14.2 111 121-249 190-323 (656)
332 3ii7_A Kelch-like protein 7; p 87.7 13 0.00044 32.1 25.9 143 88-249 12-178 (306)
333 1sqj_A OXG-RCBH, oligoxylogluc 87.5 26 0.00088 35.3 19.9 115 116-244 15-147 (789)
334 3a0f_A Xyloglucanase; beta-pro 86.8 11 0.00037 37.9 14.2 151 80-247 591-760 (763)
335 4asc_A Kelch repeat and BTB do 85.9 17 0.00057 31.6 24.1 208 97-358 13-249 (315)
336 2zwa_A Leucine carboxyl methyl 84.6 33 0.0011 33.9 18.2 148 86-251 396-579 (695)
337 2vpj_A Kelch-like protein 12; 84.6 18 0.00063 31.0 25.7 143 87-249 62-231 (301)
338 1xip_A Nucleoporin NUP159; bet 83.7 26 0.00088 31.9 21.1 128 76-234 87-230 (388)
339 1zgk_A Kelch-like ECH-associat 82.8 23 0.00077 30.6 25.0 143 87-249 24-193 (308)
340 3sbq_A Nitrous-oxide reductase 82.4 4.1 0.00014 39.2 8.1 85 199-283 299-397 (638)
341 2uvk_A YJHT; unknown function, 80.2 30 0.001 30.4 22.6 155 87-247 19-224 (357)
342 1xip_A Nucleoporin NUP159; bet 79.3 37 0.0013 30.9 16.6 139 77-250 38-192 (388)
343 2xn4_A Kelch-like protein 2; s 79.1 30 0.001 29.6 24.7 219 97-371 30-275 (302)
344 2zwa_A Leucine carboxyl methyl 78.1 56 0.0019 32.2 15.6 111 87-209 451-579 (695)
345 2woz_A Kelch repeat and BTB do 78.0 33 0.0011 29.6 17.0 111 87-214 109-238 (318)
346 3ii7_A Kelch-like protein 7; p 77.6 33 0.0011 29.4 25.0 147 87-249 55-225 (306)
347 2vpj_A Kelch-like protein 12; 77.1 34 0.0011 29.2 25.2 220 97-371 31-277 (301)
348 2woz_A Kelch repeat and BTB do 76.2 38 0.0013 29.3 23.7 134 98-249 25-184 (318)
349 2be1_A Serine/threonine-protei 75.2 8.3 0.00028 34.5 7.6 52 197-248 19-75 (339)
350 2xn4_A Kelch-like protein 2; s 74.1 41 0.0014 28.7 24.7 145 87-249 61-229 (302)
351 3f6k_A Sortilin; protein sorti 68.6 30 0.001 34.2 10.4 104 128-244 56-164 (685)
352 3sbq_A Nitrous-oxide reductase 61.0 1.2E+02 0.0042 29.2 12.5 62 113-177 320-395 (638)
353 1zgk_A Kelch-like ECH-associat 57.0 92 0.0031 26.6 24.6 143 87-249 70-240 (308)
354 3f6k_A Sortilin; protein sorti 53.0 1.8E+02 0.0061 28.7 22.3 105 88-216 56-178 (685)
355 4asc_A Kelch repeat and BTB do 48.8 1.3E+02 0.0043 25.7 19.9 101 137-249 13-126 (315)
356 3s9j_A Member of DUF4221 famil 40.5 1.1E+02 0.0037 27.5 8.4 75 227-335 37-117 (369)
357 2uvk_A YJHT; unknown function, 29.5 2.7E+02 0.0094 23.9 16.2 49 320-370 169-224 (357)
358 3elq_A Arylsulfate sulfotransf 26.7 4.3E+02 0.015 25.3 16.5 20 320-339 377-396 (571)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=1.4e-32 Score=252.70 Aligned_cols=272 Identities=25% Similarity=0.423 Sum_probs=216.3
Q ss_pred CCcCCcceEEEecCCC-EEEEecCCeEEEEEcCC-ceEEeee--------------------ecCccccCeEECC-CCcE
Q 017317 74 GILNGPEDVCVDRNGV-LYTATRDGWIKRLHKNG-TWENWKL--------------------IGGDTLLGITTTQ-ENEI 130 (373)
Q Consensus 74 g~~~~P~~ia~d~~G~-l~v~~~~g~I~~~~~~g-~~~~~~~--------------------~~~~p~~gl~~d~-~g~L 130 (373)
|.+..|+++++|++|+ +|++..+++|++++.++ +++.+.. ..+.|. ||++++ +|+|
T Consensus 16 g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~-gi~~~~~~g~l 94 (322)
T 2fp8_A 16 APSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTY-DISYNLQNNQL 94 (322)
T ss_dssp CSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEE-EEEEETTTTEE
T ss_pred CccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCc-eEEEcCCCCcE
Confidence 5578999999999998 88999999999999654 5655532 124688 999996 8999
Q ss_pred EEEECCCcEEEEe-cCC-cEEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCC
Q 017317 131 LVCDADKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL 207 (373)
Q Consensus 131 ~va~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 207 (373)
||++..+++++++ .++ .+.+.....+.++..++++++++ +|+|||++...+++...+...+.+....++|+++|+++
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 9999888899999 446 66665555555667899999999 99999999765454443333444455668999999988
Q ss_pred CeEEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCc
Q 017317 208 NETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSP 287 (373)
Q Consensus 208 ~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~ 287 (373)
++.+.+...+..|+|+++++||+.|||+++.+++|++|++++...+..+.+.. .++ |+++++|++|+|||++...+..
T Consensus 175 ~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 175 KETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp TEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred CEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCcccc
Confidence 88877777788999999999999999999999999999998765555566653 567 9999999999999999764321
Q ss_pred hhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEE
Q 017317 288 GLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGK 367 (373)
Q Consensus 288 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~ 367 (373)
. | .....+.+.+++++|+.+..+..++|..+..++.+.+.+++||+++..+++|.+
T Consensus 253 ~-----------------~-------~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~ 308 (322)
T 2fp8_A 253 N-----------------M-------HGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGI 308 (322)
T ss_dssp S-----------------T-------TSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEE
T ss_pred c-----------------c-------cCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEE
Confidence 1 0 012346799999999999999988887667788888888999999999999999
Q ss_pred eeCCC
Q 017317 368 LPLKA 372 (373)
Q Consensus 368 ~~l~~ 372 (373)
+++..
T Consensus 309 ~~~~~ 313 (322)
T 2fp8_A 309 LVYDK 313 (322)
T ss_dssp EEC--
T ss_pred Eeccc
Confidence 99863
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.96 E-value=5.3e-27 Score=215.70 Aligned_cols=273 Identities=20% Similarity=0.299 Sum_probs=195.8
Q ss_pred EeccCCcCCcceEEEecCCCEEEEe-------------cCCeEEEEEcC---CceEEeeeec-------CccccCeEECC
Q 017317 70 RLGEGILNGPEDVCVDRNGVLYTAT-------------RDGWIKRLHKN---GTWENWKLIG-------GDTLLGITTTQ 126 (373)
Q Consensus 70 ~~~~g~~~~P~~ia~d~~G~l~v~~-------------~~g~I~~~~~~---g~~~~~~~~~-------~~p~~gl~~d~ 126 (373)
...++...+||+|+++++|.+|+++ ..|.|++++.+ ++.+.+.... .+|+ ||.+.+
T Consensus 43 ~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~Ph-Gi~~~~ 121 (355)
T 3sre_A 43 NLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPH-GISTFI 121 (355)
T ss_dssp EECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEE-EEEEEE
T ss_pred EEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeee-eeEEEE
Confidence 3345545799999999999999986 68999999954 4555444332 4899 999854
Q ss_pred --CC--cEEEEECCCc-----EEEEecCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCcccccccc-cccccccc
Q 017317 127 --EN--EILVCDADKG-----LLKVTEEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNW-GLDLLEAK 195 (373)
Q Consensus 127 --~g--~L~va~~~~g-----l~~~~~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~-~~~~~~~~ 195 (373)
+| +|||++...+ +++++.++ ...+.....+.+++.+|+++++++|++|+++... |.-... ..+..+..
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~-ftd~~~~~~e~~~~~ 200 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY-FIDPYLKSWEMHLGL 200 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS-CSSHHHHHHHHHTTC
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE-eCCcccccchhhccC
Confidence 45 5999987533 78888544 5555566677888999999999999999997531 111100 01112234
Q ss_pred CCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCC-CCcceeEEecCCCCCCCceeECC-
Q 017317 196 PHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE-SKEQTEIFVENLPGGPDNIKLAP- 273 (373)
Q Consensus 196 ~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~g~p~~i~~d~- 273 (373)
..|+||++|+. +.+.+.+++..|||++++||++++||+++..++|++|++++. +....+.+ ..++.|||+++|+
T Consensus 201 ~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~vD~e 276 (355)
T 3sre_A 201 AWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNISVDPV 276 (355)
T ss_dssp CCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEEECTT
T ss_pred CccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEEEeCC
Confidence 67899999984 667778889999999999999999999999999999998743 34444444 3578999999999
Q ss_pred CCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC----CCCcEEEEEeCCCCceecceeEEE
Q 017317 274 DGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA----ANGIVIRKFEDPNGKVMSFVTSAL 349 (373)
Q Consensus 274 dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~----~~g~~~~~~~~~~g~~~~~~~~~~ 349 (373)
+|++|+|...+.. ++...-|. ...-..+.++. .++++.+.|.+ +|+.+...|.+.
T Consensus 277 ~G~lwva~~~~g~-------------~v~~~~P~-------~~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~l~~~T~a~ 335 (355)
T 3sre_A 277 TGDLWVGCHPNGM-------------RIFFYDAE-------NPPGSEVLRIQDILSEEPKVTVVYAE-NGTVLQGSTVAA 335 (355)
T ss_dssp TCCEEEEEESCHH-------------HHHSCCTT-------SCCCEEEEEEECTTSSSCEEEEEEEE-CSSSCCSEEEEE
T ss_pred CCcEEEEecCCce-------------EEEEECCC-------CCCCCEEEEEEccCCCCcEEEEEEEc-CCCEEEeeEEEE
Confidence 5999998753311 11111111 01112355554 57888888887 888888889888
Q ss_pred EeCCEEEEeeCCCCeEEEeeC
Q 017317 350 EFDDHLYLGSLNTNFIGKLPL 370 (373)
Q Consensus 350 ~~~g~L~vgs~~~~~i~~~~l 370 (373)
..+|+||+|++..+ +..++|
T Consensus 336 ~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 336 VYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp EETTEEEEEESSSC-EEEEEC
T ss_pred EECCEEEEEEcCCC-ceeccC
Confidence 88999999999887 555553
No 3
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.96 E-value=1.9e-26 Score=210.00 Aligned_cols=257 Identities=19% Similarity=0.264 Sum_probs=197.1
Q ss_pred ceeEeccCCcCCcceEEEecCCC--EEEEecCCeEEEEEcCCceEEeeeecCccccCeEECCCCcEEEEECC-CcEEEEe
Q 017317 67 SVTRLGEGILNGPEDVCVDRNGV--LYTATRDGWIKRLHKNGTWENWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT 143 (373)
Q Consensus 67 ~~~~~~~g~~~~P~~ia~d~~G~--l~v~~~~g~I~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~-~gl~~~~ 143 (373)
.++++.++ +..+|+.+++++|+ +|++..+++|++++.+|+.+.+....+.+. +++++++|+||+++.. .+|.+++
T Consensus 36 ~~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~-gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 36 RLLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTN-GNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEE-EEEECTTSCEEEEETTTTEEEEEC
T ss_pred ceEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccc-eeeECCCCCEEEEECCCCEEEEEC
Confidence 56677777 57799999999887 457778899999998888777766677888 9999999999999865 5799998
Q ss_pred cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCcccccccccc--ccccccCCceEEEEeCCCCeEEEeecCCCCc
Q 017317 144 EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGL--DLLEAKPHGKLLKYDPSLNETSILLDSLFFA 220 (373)
Q Consensus 144 ~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~--~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ 220 (373)
.+| .+.+.....+.+++.+++++++++|++||+|.. ||...... ........++|+++|+++++.+.+. .+..|
T Consensus 114 ~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p 190 (305)
T 3dr2_A 114 ADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHP 190 (305)
T ss_dssp TTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSE
T ss_pred CCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcC--CCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCC
Confidence 558 777665556666778999999999999999864 22211000 0001123468999999878877666 77889
Q ss_pred ceEEEccCCCEEEEEeCCC-----CeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCC
Q 017317 221 NGVALSKDEDYLVVCETFK-----FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTS 295 (373)
Q Consensus 221 ~gi~~~~dg~~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~ 295 (373)
+|+++++|++.||++++.. ++|++|++++......+.+.....+.|+++++|++|+||+++..
T Consensus 191 ~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~------------ 258 (305)
T 3dr2_A 191 NGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT------------ 258 (305)
T ss_dssp EEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS------------
T ss_pred cceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC------------
Confidence 9999999999999999863 78999998764433444555445678999999999999999843
Q ss_pred hHHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe--CCEEEEeeCCCCeEEEeeCC
Q 017317 296 KATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF--DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 296 p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~vgs~~~~~i~~~~l~ 371 (373)
.|.+++++|+.+..+..+.+ ++.+.+. +++||+++.. .|.+++++
T Consensus 259 ------------------------gv~~~~~~g~~~~~~~~~~~-----~~~~~f~~d~~~L~it~~~--~l~~~~~~ 305 (305)
T 3dr2_A 259 ------------------------GVCVFDSDGQLLGHIPTPGT-----ASNCTFDQAQQRLFITGGP--CLWMLPLP 305 (305)
T ss_dssp ------------------------EEEEECTTSCEEEEEECSSC-----CCEEEECTTSCEEEEEETT--EEEEEECC
T ss_pred ------------------------cEEEECCCCCEEEEEECCCc-----eeEEEEeCCCCEEEEEcCC--eEEEEECC
Confidence 38999999999998887652 4555553 4689999964 68888764
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.95 E-value=1.2e-24 Score=196.94 Aligned_cols=256 Identities=17% Similarity=0.254 Sum_probs=190.9
Q ss_pred ceeEeccCCcCCcceEEEecCCC--EEEEecCCeEEEEEcCCceEEeeeecCccccCeEECCCCcEEEEECC-CcEEEEe
Q 017317 67 SVTRLGEGILNGPEDVCVDRNGV--LYTATRDGWIKRLHKNGTWENWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT 143 (373)
Q Consensus 67 ~~~~~~~g~~~~P~~ia~d~~G~--l~v~~~~g~I~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~-~gl~~~~ 143 (373)
..+.+.++ +..||+++++++|+ +|++..+++|+++++++..+.+......|. +++++++|+||+++.. .+|.+++
T Consensus 19 ~~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~l~~~~dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 19 EARRLADG-FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQN-GHCLNKQGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEE-EEEECTTCCEEEEETTTTEEEEEC
T ss_pred cEEEEecC-CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcc-eeeECCCCcEEEEecCCCeEEEEc
Confidence 44566655 67899999999987 457778899999996655666655566788 9999999999999865 6799999
Q ss_pred -cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccc--cccccccCCceEEEEeCCCCeEEEeecCCCC
Q 017317 144 -EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWG--LDLLEAKPHGKLLKYDPSLNETSILLDSLFF 219 (373)
Q Consensus 144 -~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~--~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~ 219 (373)
.+| .+.+.....+.....+++++++++|++|+++.. ++..... .........++|++++++ ++.+.+......
T Consensus 97 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~--~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~ 173 (296)
T 3e5z_A 97 EPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPT--YGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVK 173 (296)
T ss_dssp STTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECS--HHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSS
T ss_pred CCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCc--cccccccccccccccCCCcEEEEECCC-CCEEEeecCCCC
Confidence 578 666654444555667899999999999999753 1110000 000011134689999998 777777778888
Q ss_pred cceEEEccCCCEEEEEeCCCCeEEEEEecC-CCC-cceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChH
Q 017317 220 ANGVALSKDEDYLVVCETFKFRCLKYWLKG-ESK-EQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKA 297 (373)
Q Consensus 220 ~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~-~~~-~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~ 297 (373)
|+++++++|++.+ ++++..++|++|++++ ... .....+ ....+.|+++++|++|+||+++ .+
T Consensus 174 ~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~~------------- 237 (296)
T 3e5z_A 174 PNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-GD------------- 237 (296)
T ss_dssp EEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-TT-------------
T ss_pred CccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-CC-------------
Confidence 9999999999977 9999999999999862 233 223344 3455789999999999999999 33
Q ss_pred HHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe--C-CEEEEeeCCCCeEEEeeCCC
Q 017317 298 TKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF--D-DHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~-g~L~vgs~~~~~i~~~~l~~ 372 (373)
.|.+++++|+.+..+..+.+ ++.+.+. + ++||+++. +.|.++++..
T Consensus 238 ----------------------~v~~~~~~g~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~t~--~~l~~~~~~~ 286 (296)
T 3e5z_A 238 ----------------------GVHVLTPDGDELGRVLTPQT-----TSNLCFGGPEGRTLYMTVS--TEFWSIETNV 286 (296)
T ss_dssp ----------------------EEEEECTTSCEEEEEECSSC-----CCEEEEESTTSCEEEEEET--TEEEEEECSC
T ss_pred ----------------------eEEEECCCCCEEEEEECCCC-----ceeEEEECCCCCEEEEEcC--CeEEEEEccc
Confidence 48999999999998876653 4555553 2 47999996 4699998764
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.93 E-value=2.8e-23 Score=188.34 Aligned_cols=245 Identities=13% Similarity=0.134 Sum_probs=179.8
Q ss_pred EeccCCcCCcceEEEec-CCCEEE-EecCCeEEEEEcCC-ceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cC
Q 017317 70 RLGEGILNGPEDVCVDR-NGVLYT-ATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EE 145 (373)
Q Consensus 70 ~~~~g~~~~P~~ia~d~-~G~l~v-~~~~g~I~~~~~~g-~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~ 145 (373)
.+......-+|+.++++ ++.||+ +..+++|+++++++ +.+.+ .....+. +++++++|+||++. ..+|++++ .+
T Consensus 6 ~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~-~i~~~~dG~l~v~~-~~~l~~~d~~~ 82 (297)
T 3g4e_A 6 CVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVS-SVALRQSGGYVATI-GTKFCALNWKE 82 (297)
T ss_dssp EEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEE-EEEEBTTSSEEEEE-TTEEEEEETTT
T ss_pred EEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceE-EEEECCCCCEEEEE-CCeEEEEECCC
Confidence 33333356789999998 677774 55789999999654 44433 3456788 99999999999998 47899999 66
Q ss_pred C-cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEE
Q 017317 146 G-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVA 224 (373)
Q Consensus 146 g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~ 224 (373)
+ .+.+.....+.+...++++++|++|++|+++...... ........+.||+++++ ++...+...+..|+|++
T Consensus 83 g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~------~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 83 QSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA------PAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLD 155 (297)
T ss_dssp TEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB------TTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEE
T ss_pred CcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc------cccccCCCcEEEEEECC-CCEEEEeeccccccceE
Confidence 7 7666554444456678999999999999997531100 00011245789999987 55666667778899999
Q ss_pred EccCCCEEEEEeCCCCeEEEEEec--CCCCcceeEEec--CCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHH
Q 017317 225 LSKDEDYLVVCETFKFRCLKYWLK--GESKEQTEIFVE--NLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKH 300 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~~i~~~~~~--~~~~~~~~~~~~--~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~ 300 (373)
+++|++.|||+++..++|++|+++ .......+.+.. ...+.|+++++|++|+||++++.+
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~---------------- 219 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG---------------- 219 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT----------------
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC----------------
Confidence 999999999999999999999974 222332334432 223689999999999999999865
Q ss_pred HHHhcchhhhhccCCCccEEEEEECCC-CcEEEEEeCCCCceecceeEEEEeC---CEEEEeeCCC
Q 017317 301 LLAAFPKLIKLVAPLHKKAAVVNVAAN-GIVIRKFEDPNGKVMSFVTSALEFD---DHLYLGSLNT 362 (373)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~g~v~~~~~~-g~~~~~~~~~~g~~~~~~~~~~~~~---g~L~vgs~~~ 362 (373)
+.|.++|++ |+.+..+..+. ..++++.+.+ ++||+++...
T Consensus 220 ------------------~~v~~~d~~tG~~~~~i~~p~----~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 220 ------------------GRVIRLDPVTGKRLQTVKLPV----DKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp ------------------TEEEEECTTTCCEEEEEECSS----SBEEEEEEESGGGCEEEEEEBCT
T ss_pred ------------------CEEEEEcCCCceEEEEEECCC----CCceEEEEeCCCCCEEEEEcCCc
Confidence 258999987 99998887664 2477787752 5899999754
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.93 E-value=3.5e-23 Score=188.22 Aligned_cols=261 Identities=19% Similarity=0.306 Sum_probs=188.1
Q ss_pred eeEeccCCcCCcceEEEecCCCEEEE--------ecCCeEEEEE-cCCceEEeee-----ecCccccCeEECCC-CcEEE
Q 017317 68 VTRLGEGILNGPEDVCVDRNGVLYTA--------TRDGWIKRLH-KNGTWENWKL-----IGGDTLLGITTTQE-NEILV 132 (373)
Q Consensus 68 ~~~~~~g~~~~P~~ia~d~~G~l~v~--------~~~g~I~~~~-~~g~~~~~~~-----~~~~p~~gl~~d~~-g~L~v 132 (373)
.+.+..+ +..|++++++++|++|++ ..+++|++++ .+|+++.+.. ....|. +++++++ |+||+
T Consensus 10 ~~~~~~~-~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~~~~~g~l~v 87 (314)
T 1pjx_A 10 FTKVTED-IPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPA-GCQCDRDANQLFV 87 (314)
T ss_dssp CEEEECC-CTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEE-EEEECSSSSEEEE
T ss_pred Hhhhhcc-CCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCc-eEEEecCCCcEEE
Confidence 3455555 789999999999999987 5778999999 5777765543 346788 9999999 99999
Q ss_pred EECCCcEEEEecCC-cEEE-eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeE
Q 017317 133 CDADKGLLKVTEEG-VTVL-ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET 210 (373)
Q Consensus 133 a~~~~gl~~~~~~g-~~~l-~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 210 (373)
++...+|++++.+| .+.+ .....+.+...+++++++++|++|+++.........+ ........++|+++|++ ++.
T Consensus 88 ~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 88 ADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADY--TRSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp EETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCC--CBTTSSSCEEEEEECTT-SCE
T ss_pred EECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccc--cccccCCCCeEEEECCC-CCE
Confidence 98777899999338 6554 3332333445789999999999999986411000000 00111234789999987 666
Q ss_pred EEeecCCCCcceEEEc----cCCCEEEEEeCCCCeEEEEEecC-CCCcceeEEec--CCC-CCCCceeECCCCCEEEEEe
Q 017317 211 SILLDSLFFANGVALS----KDEDYLVVCETFKFRCLKYWLKG-ESKEQTEIFVE--NLP-GGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 211 ~~~~~~~~~~~gi~~~----~dg~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~--~~~-g~p~~i~~d~dG~lwva~~ 282 (373)
+.+......|++++++ +|++.+|+++...++|++|+.++ ........+.. ... +.|+++++|++|++|+++.
T Consensus 165 ~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~ 244 (314)
T 1pjx_A 165 IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANW 244 (314)
T ss_dssp EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEE
T ss_pred EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEc
Confidence 6665666778999999 99988999998889999999752 22222222321 111 5689999999999999986
Q ss_pred cCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECCC-CcEEEEEeCCCCceecceeEEEEe-CC-EEEEee
Q 017317 283 QLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAAN-GIVIRKFEDPNGKVMSFVTSALEF-DD-HLYLGS 359 (373)
Q Consensus 283 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~vgs 359 (373)
.. +.+.+++++ |+.+..+..+. ..+..+.++ ++ .||+++
T Consensus 245 ~~----------------------------------~~i~~~d~~~g~~~~~~~~~~----~~~~~i~~~~dg~~l~v~~ 286 (314)
T 1pjx_A 245 GS----------------------------------SHIEVFGPDGGQPKMRIRCPF----EKPSNLHFKPQTKTIFVTE 286 (314)
T ss_dssp TT----------------------------------TEEEEECTTCBSCSEEEECSS----SCEEEEEECTTSSEEEEEE
T ss_pred CC----------------------------------CEEEEEcCCCCcEeEEEeCCC----CCceeEEECCCCCEEEEEe
Confidence 53 248899988 88777665443 346777765 45 499999
Q ss_pred CCCCeEEEeeCC
Q 017317 360 LNTNFIGKLPLK 371 (373)
Q Consensus 360 ~~~~~i~~~~l~ 371 (373)
...+.|.++++.
T Consensus 287 ~~~~~l~~~~~~ 298 (314)
T 1pjx_A 287 HENNAVWKFEWQ 298 (314)
T ss_dssp TTTTEEEEEECS
T ss_pred CCCCeEEEEeCC
Confidence 988899999875
No 7
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.90 E-value=5.7e-21 Score=173.91 Aligned_cols=225 Identities=17% Similarity=0.227 Sum_probs=169.0
Q ss_pred CCcceEEEecCCCEEEEe-cCCeEEEEEcCCceEEeeeecCccccCeEECCCCcEEEEECC-Cc--EEEEe-cCC-cEEE
Q 017317 77 NGPEDVCVDRNGVLYTAT-RDGWIKRLHKNGTWENWKLIGGDTLLGITTTQENEILVCDAD-KG--LLKVT-EEG-VTVL 150 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~-~~g~I~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~-~g--l~~~~-~~g-~~~l 150 (373)
..|++++++++|+||+.+ .+++|++++++|+...+....+.|. +|+++++|+|||++.. .+ +++++ ++| ++.+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~-gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVS-GLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEE-EEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCce-eEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 679999999999999877 7899999998887766656667899 9999999999999854 23 88888 677 6655
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-----------ecCCCC
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-----------LDSLFF 219 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-----------~~~~~~ 219 (373)
.... ....+++++..+++.+|+++.. .+.||++|+.+++.+.. ...+..
T Consensus 111 ~~~~---~~~~~~g~~~~~~~~~~v~d~~-----------------~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~ 170 (306)
T 2p4o_A 111 LTLP---DAIFLNGITPLSDTQYLTADSY-----------------RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPA 170 (306)
T ss_dssp EECT---TCSCEEEEEESSSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCS
T ss_pred EeCC---CccccCcccccCCCcEEEEECC-----------------CCeEEEEeCCCCcEeEEEECCccccccccCCCCc
Confidence 4432 1345678888888889999853 47999999876543221 134567
Q ss_pred cceEEEccCCCEEEEEeCCCCeEEEEEecC-CCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHH
Q 017317 220 ANGVALSKDEDYLVVCETFKFRCLKYWLKG-ESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKAT 298 (373)
Q Consensus 220 ~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~ 298 (373)
|+|+ ++|+++|||+++.+++|++|+.++ ...+..+.+... ..|+++++|++|++|++....
T Consensus 171 pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~--~~P~gi~vd~dG~l~va~~~~-------------- 232 (306)
T 2p4o_A 171 ANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ--TNIDDFAFDVEGNLYGATHIY-------------- 232 (306)
T ss_dssp EEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEES--CCCSSEEEBTTCCEEEECBTT--------------
T ss_pred CCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEecc--CCCCCeEECCCCCEEEEeCCC--------------
Confidence 8998 889999999999999999999875 333444444422 479999999999999998754
Q ss_pred HHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe----C-CEEEEeeCCC
Q 017317 299 KHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF----D-DHLYLGSLNT 362 (373)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~----~-g~L~vgs~~~ 362 (373)
+.|.+++++|+.......+.+ ...++++.+. + ++||+.+..+
T Consensus 233 --------------------~~V~~~~~~G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 233 --------------------NSVVRIAPDRSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp --------------------CCEEEECTTCCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred --------------------CeEEEECCCCCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCCC
Confidence 247889999987543222222 3457888774 2 6999998754
No 8
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.89 E-value=6.8e-21 Score=181.42 Aligned_cols=240 Identities=15% Similarity=0.149 Sum_probs=179.5
Q ss_pred CcCCcceEEEecC---CCEEEEecCCeEEEEEc-CCceEEeeeecCccccCeEECCCCcEEEEECC-----CcEEEEec-
Q 017317 75 ILNGPEDVCVDRN---GVLYTATRDGWIKRLHK-NGTWENWKLIGGDTLLGITTTQENEILVCDAD-----KGLLKVTE- 144 (373)
Q Consensus 75 ~~~~P~~ia~d~~---G~l~v~~~~g~I~~~~~-~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~-----~gl~~~~~- 144 (373)
.+..|.+|++|++ |+||+++..++|++++. +|+++.+......|. +|+++++|+|||++.. .+++.++.
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~-giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCA-DVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEE-EEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCcc-EEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 5788999999984 99999886689999995 777777766667799 9999999999999863 35777763
Q ss_pred CCc---EEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeE-EEeec--CC
Q 017317 145 EGV---TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET-SILLD--SL 217 (373)
Q Consensus 145 ~g~---~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-~~~~~--~~ 217 (373)
.+. ..+. .+..|+++++++ +|+|||++.. +++|+++|++++.. +.+.. ..
T Consensus 216 ~~~~~~~~~~------~~~~P~giavd~~~G~lyv~d~~-----------------~~~V~~~d~~~g~~~~~~~~~~~~ 272 (433)
T 4hw6_A 216 SGFTERLSLC------NARGAKTCAVHPQNGKIYYTRYH-----------------HAMISSYDPATGTLTEEEVMMDTK 272 (433)
T ss_dssp GTTCCEEEEE------ECSSBCCCEECTTTCCEEECBTT-----------------CSEEEEECTTTCCEEEEEEECSCC
T ss_pred CCeecccccc------ccCCCCEEEEeCCCCeEEEEECC-----------------CCEEEEEECCCCeEEEEEeccCCC
Confidence 332 1221 356789999999 8999999864 47899999987766 33322 23
Q ss_pred CCcceEEEccCCCEEEEEeCCCCeEEEEEecCC--CCcceeEEecC--C------------CCCCCceeE---------C
Q 017317 218 FFANGVALSKDEDYLVVCETFKFRCLKYWLKGE--SKEQTEIFVEN--L------------PGGPDNIKL---------A 272 (373)
Q Consensus 218 ~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~--~------------~g~p~~i~~---------d 272 (373)
..+.+++++++++.|||++..+++|++++.++. .......+... . ...|.++++ |
T Consensus 273 ~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd 352 (433)
T 4hw6_A 273 GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEE 352 (433)
T ss_dssp SSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSS
T ss_pred CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccC
Confidence 445689999999999999999999999987642 22222222211 1 124778999 9
Q ss_pred CCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCC--------CC-----
Q 017317 273 PDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDP--------NG----- 339 (373)
Q Consensus 273 ~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~--------~g----- 339 (373)
.+|+|||+.... +.|.+++++|++....... +|
T Consensus 353 ~~g~lyvaD~~n----------------------------------~~I~~~~~~G~v~t~~G~g~~~~~G~~dG~~~~~ 398 (433)
T 4hw6_A 353 DEYDFYFCDRDS----------------------------------HTVRVLTPEGRVTTYAGRGNSREWGYVDGELRSQ 398 (433)
T ss_dssp CCEEEEEEETTT----------------------------------TEEEEECTTSEEEEEECCCTTCSSCCBCEETTTT
T ss_pred CCCcEEEEECCC----------------------------------CEEEEECCCCCEEEEEeCCCCCccccCCCccccc
Confidence 999999998764 2578899999766554321 11
Q ss_pred ceecceeEEEEe--CCEEEEeeCCCCeEEEeeCCC
Q 017317 340 KVMSFVTSALEF--DDHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 340 ~~~~~~~~~~~~--~g~L~vgs~~~~~i~~~~l~~ 372 (373)
..++.+..+..+ +|+||++...+++|.++.+++
T Consensus 399 ~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e~ 433 (433)
T 4hw6_A 399 ALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPEE 433 (433)
T ss_dssp CBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEECC
T ss_pred cEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecCC
Confidence 135678888877 689999999999999998764
No 9
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.89 E-value=3.4e-20 Score=170.32 Aligned_cols=243 Identities=17% Similarity=0.206 Sum_probs=176.1
Q ss_pred ceeEeccCCcCCcceEEEecC-CCEE-EEecCCeEEEEEcCC-ceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe
Q 017317 67 SVTRLGEGILNGPEDVCVDRN-GVLY-TATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT 143 (373)
Q Consensus 67 ~~~~~~~g~~~~P~~ia~d~~-G~l~-v~~~~g~I~~~~~~g-~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~ 143 (373)
+++.+.+....-+|+.+++++ +.+| ++..+++|++++.++ +.+.+. ....+. +++++++|++|++.. .+|++++
T Consensus 39 ~~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~-~i~~~~dg~l~v~~~-~gl~~~d 115 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGS-ALAKISDSKQLIASD-DGLFLRD 115 (326)
T ss_dssp CCEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEE-EEEEEETTEEEEEET-TEEEEEE
T ss_pred ceEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcce-EEEEeCCCeEEEEEC-CCEEEEE
Confidence 455666655566899999984 6676 555788999999544 444432 345677 899999999999984 6899999
Q ss_pred -cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcc
Q 017317 144 -EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFAN 221 (373)
Q Consensus 144 -~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~ 221 (373)
.+| .+.+.....+.....+++++++++|++|+++.... .....++||+++ + ++.+.+......++
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~-----------~~~~~~~l~~~~-~-g~~~~~~~~~~~~~ 182 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK-----------AETGAGSIYHVA-K-GKVTKLFADISIPN 182 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT-----------CCTTCEEEEEEE-T-TEEEEEEEEESSEE
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc-----------CCCCceEEEEEe-C-CcEEEeeCCCcccC
Confidence 667 66554332223345688999999999999874310 012347899999 4 67666655566789
Q ss_pred eEEEccCCCEEEEEeCCCCeEEEEEec--CC-CCcceeEEec--CCCCCCCceeECCCCCEEEEEecCCCchhhhccCCh
Q 017317 222 GVALSKDEDYLVVCETFKFRCLKYWLK--GE-SKEQTEIFVE--NLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSK 296 (373)
Q Consensus 222 gi~~~~dg~~l~v~~~~~~~i~~~~~~--~~-~~~~~~~~~~--~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p 296 (373)
++++++|++.+|++++..++|++|+.+ +. .....+.+.. ...+.|+++++|++|++|+++...
T Consensus 183 ~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~------------ 250 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE------------ 250 (326)
T ss_dssp EEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT------------
T ss_pred CeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC------------
Confidence 999999999999999988999999975 22 2222233322 234679999999999999999753
Q ss_pred HHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-C--CEEEEeeCCCC
Q 017317 297 ATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-D--DHLYLGSLNTN 363 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~--g~L~vgs~~~~ 363 (373)
+.|.+++++|+.+..+..+. ..++.+.+. + ++||+++..+.
T Consensus 251 ----------------------~~v~~~d~~g~~~~~i~~~~----~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 251 ----------------------GAVDRYDTDGNHIARYEVPG----KQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp ----------------------TEEEEECTTCCEEEEEECSC----SBEEEEEEESTTSCEEEEEEBCTT
T ss_pred ----------------------CEEEEECCCCCEEEEEECCC----CCcEEEEEecCCCCEEEEEecCCC
Confidence 24899999999888887554 246777765 2 58999997763
No 10
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.88 E-value=3.6e-20 Score=166.36 Aligned_cols=237 Identities=14% Similarity=0.153 Sum_probs=173.8
Q ss_pred CCcCCcceEEEecCCCEEEEe-cCCeEEEEEcCCceEEeeee-------cCccccCeEE-CCCCcEEEEEC--CCcEEEE
Q 017317 74 GILNGPEDVCVDRNGVLYTAT-RDGWIKRLHKNGTWENWKLI-------GGDTLLGITT-TQENEILVCDA--DKGLLKV 142 (373)
Q Consensus 74 g~~~~P~~ia~d~~G~l~v~~-~~g~I~~~~~~g~~~~~~~~-------~~~p~~gl~~-d~~g~L~va~~--~~gl~~~ 142 (373)
+.+..|.+++++++|++|+++ .+++|.+++.+|+....... ...|. ++++ +++|+|||++. ...|.++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~-~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPN-RVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEE-EEEEETTTTEEEEEECGGGCEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCce-EEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 557889999999999999875 67899999977764332211 24678 9999 68999999985 4678888
Q ss_pred ecCC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee--cCCC
Q 017317 143 TEEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DSLF 218 (373)
Q Consensus 143 ~~~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~~~ 218 (373)
+.+| ...+. ......+++|+++++|++|+++.. .+.|+++|+++.....+. ..+.
T Consensus 106 d~~g~~~~~~~----~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~~~~~ 164 (286)
T 1q7f_A 106 NQYGQFVRKFG----ATILQHPRGVTVDNKGRIIVVECK-----------------VMRVIIFDQNGNVLHKFGCSKHLE 164 (286)
T ss_dssp CTTSCEEEEEC----TTTCSCEEEEEECTTSCEEEEETT-----------------TTEEEEECTTSCEEEEEECTTTCS
T ss_pred CCCCcEEEEec----CccCCCceEEEEeCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEeCCCCccC
Confidence 8656 33331 123356889999999999999854 468999998755544443 3456
Q ss_pred CcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC-CCCCCCceeECCCCCEEEEEecCCCchhhhccCChH
Q 017317 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN-LPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKA 297 (373)
Q Consensus 219 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~ 297 (373)
.|++++++++|+ +|+++..+++|.+|+.++.. ...+... ....|.++++|++|++|+++....
T Consensus 165 ~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~---~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~------------ 228 (286)
T 1q7f_A 165 FPNGVVVNDKQE-IFISDNRAHCVKVFNYEGQY---LRQIGGEGITNYPIGVGINSNGEILIADNHNN------------ 228 (286)
T ss_dssp SEEEEEECSSSE-EEEEEGGGTEEEEEETTCCE---EEEESCTTTSCSEEEEEECTTCCEEEEECSSS------------
T ss_pred CcEEEEECCCCC-EEEEECCCCEEEEEcCCCCE---EEEEccCCccCCCcEEEECCCCCEEEEeCCCC------------
Confidence 799999999987 99999888999999975532 2223211 124689999999999999986531
Q ss_pred HHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeEEEeeCCC
Q 017317 298 TKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~~ 372 (373)
+.|..++++|+.+..+..... ...+..+..+ +|+||+++. .+.|..+++..
T Consensus 229 ---------------------~~i~~~~~~g~~~~~~~~~~~--~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~~~ 280 (286)
T 1q7f_A 229 ---------------------FNLTIFTQDGQLISALESKVK--HAQCFDVALMDDGSVVLASK-DYRLYIYRYVQ 280 (286)
T ss_dssp ---------------------CEEEEECTTSCEEEEEEESSC--CSCEEEEEEETTTEEEEEET-TTEEEEEECSC
T ss_pred ---------------------EEEEEECCCCCEEEEEcccCC--CCcceeEEECCCCcEEEECC-CCeEEEEEccc
Confidence 147889999998888764332 2245566665 689999975 78898888653
No 11
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.88 E-value=4.9e-20 Score=169.08 Aligned_cols=248 Identities=20% Similarity=0.252 Sum_probs=177.0
Q ss_pred cCCcceEEEecCCCEEE-EecCCeEEEEEc-CCceEEee-eecCccccCeEECCCCcEEEEECCC-----cEEEEe-cCC
Q 017317 76 LNGPEDVCVDRNGVLYT-ATRDGWIKRLHK-NGTWENWK-LIGGDTLLGITTTQENEILVCDADK-----GLLKVT-EEG 146 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v-~~~~g~I~~~~~-~g~~~~~~-~~~~~p~~gl~~d~~g~L~va~~~~-----gl~~~~-~~g 146 (373)
...|++++++++|+||+ +..+++|++++. +++...+. .....+. +++++++|+||+++... +|++++ .++
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~ 122 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPA-AIKIHKDGRLFVCYLGDFKSTGGIFAATENGD 122 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEE-EEEECTTSCEEEEECTTSSSCCEEEEECTTSC
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcc-eEEECCCCcEEEEeCCCCCCCceEEEEeCCCC
Confidence 56799999999999996 557889999995 45655543 3346688 99999999999997654 799999 555
Q ss_pred -cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEE
Q 017317 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVAL 225 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~ 225 (373)
.+.+.... .....+++++++++|++|+++.... .....++|+++|+++++.+.+......++++++
T Consensus 123 ~~~~~~~~~--~~~~~~~~i~~d~~g~l~v~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~ 189 (333)
T 2dg1_A 123 NLQDIIEDL--STAYCIDDMVFDSKGGFYFTDFRGY-----------STNPLGGVYYVSPDFRTVTPIIQNISVANGIAL 189 (333)
T ss_dssp SCEEEECSS--SSCCCEEEEEECTTSCEEEEECCCB-----------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEE
T ss_pred EEEEEEccC--ccCCcccceEECCCCCEEEEecccc-----------ccCCCceEEEEeCCCCEEEEeecCCCcccceEE
Confidence 54332211 1234688999999999999975310 012347899999987777666555667899999
Q ss_pred ccCCCEEEEEeCCCCeEEEEEecC--CCCcce--eEEec-CCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHH
Q 017317 226 SKDEDYLVVCETFKFRCLKYWLKG--ESKEQT--EIFVE-NLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKH 300 (373)
Q Consensus 226 ~~dg~~l~v~~~~~~~i~~~~~~~--~~~~~~--~~~~~-~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~ 300 (373)
++||+.+|+++...++|++|+.+. ...... ..+.. .....|+++++|++|++|+++...
T Consensus 190 ~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~---------------- 253 (333)
T 2dg1_A 190 STDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQ---------------- 253 (333)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETT----------------
T ss_pred CCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCC----------------
Confidence 999999999998888999999853 221111 11111 111378999999999999998653
Q ss_pred HHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCc--eecceeEEEEe-C-CEEEEeeCCCC-----eEEEeeCC
Q 017317 301 LLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGK--VMSFVTSALEF-D-DHLYLGSLNTN-----FIGKLPLK 371 (373)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~--~~~~~~~~~~~-~-g~L~vgs~~~~-----~i~~~~l~ 371 (373)
+.|.+++++|+.+..+..+... .+..+..+... + ++||+++..++ .|.++++.
T Consensus 254 ------------------~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~~~ 315 (333)
T 2dg1_A 254 ------------------GRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVNGF 315 (333)
T ss_dssp ------------------TEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEECS
T ss_pred ------------------CEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEEEecc
Confidence 2478899999988888655320 12245666664 3 58999998743 67877764
No 12
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.88 E-value=2.1e-20 Score=166.15 Aligned_cols=232 Identities=18% Similarity=0.240 Sum_probs=168.0
Q ss_pred CcceEEEecCCCEEE-Ee-cCCeEEEEEcCCc-eEEeee-ecCccccCeEECCCCcEEEEECCCcEEEEecCC--cEEEe
Q 017317 78 GPEDVCVDRNGVLYT-AT-RDGWIKRLHKNGT-WENWKL-IGGDTLLGITTTQENEILVCDADKGLLKVTEEG--VTVLA 151 (373)
Q Consensus 78 ~P~~ia~d~~G~l~v-~~-~~g~I~~~~~~g~-~~~~~~-~~~~p~~gl~~d~~g~L~va~~~~gl~~~~~~g--~~~l~ 151 (373)
.|.+++++++|+||+ +. .+++|.+++.++. ...+.. ....|. +|+++++|+|||++..++|++++.++ ...+.
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQ-GLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCC-CEEECTTCCEEEEETTTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcc-eeEECCCCCEEEEcCCCEEEEEeCCCceEeeee
Confidence 899999999999999 84 6789999985443 222222 235688 99999999999998756788998544 33321
Q ss_pred eccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-ecCCCCcceEEEccCCC
Q 017317 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVALSKDED 230 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~~gi~~~~dg~ 230 (373)
......+.+|+++++|++|+++.. .+.|++++..+...... ......|++++++++|+
T Consensus 104 ----~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 162 (270)
T 1rwi_B 104 ----FDGLNYPEGLAVDTQGAVYVADRG-----------------NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN 162 (270)
T ss_dssp ----CCSCSSEEEEEECTTCCEEEEEGG-----------------GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC
T ss_pred ----cCCcCCCcceEECCCCCEEEEECC-----------------CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC
Confidence 122356889999999999999753 46899998765543332 23456799999999998
Q ss_pred EEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhh
Q 017317 231 YLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIK 310 (373)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 310 (373)
+|+++..+++|.+|+.++.... .........|.++++|++|++|+++...
T Consensus 163 -l~v~~~~~~~i~~~~~~~~~~~---~~~~~~~~~p~~i~~d~~g~l~v~~~~~-------------------------- 212 (270)
T 1rwi_B 163 -VYVTDTDNNRVVKLEAESNNQV---VLPFTDITAPWGIAVDEAGTVYVTEHNT-------------------------- 212 (270)
T ss_dssp -EEEEEGGGTEEEEECTTTCCEE---ECCCSSCCSEEEEEECTTCCEEEEETTT--------------------------
T ss_pred -EEEEECCCCEEEEEecCCCceE---eecccCCCCceEEEECCCCCEEEEECCC--------------------------
Confidence 9999988889999987653211 1111112568999999999999998653
Q ss_pred hccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeEEEeeCCC
Q 017317 311 LVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 311 ~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~~ 372 (373)
+.+.+++++++....... .+ +..+..+..+ +|+||+++..++.|.++++.+
T Consensus 213 --------~~v~~~~~~~~~~~~~~~-~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~ 264 (270)
T 1rwi_B 213 --------NQVVKLLAGSTTSTVLPF-TG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLE 264 (270)
T ss_dssp --------SCEEEECTTCSCCEECCC-CS--CSCEEEEEECTTCCEEEEEGGGTEEEEECCCG
T ss_pred --------CcEEEEcCCCCcceeecc-CC--CCCceeEEECCCCCEEEEECCCCEEEEEcCCC
Confidence 137889988876544321 22 3457777776 579999999999999999864
No 13
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.87 E-value=6.2e-19 Score=158.56 Aligned_cols=232 Identities=13% Similarity=0.203 Sum_probs=172.8
Q ss_pred cCCcceEEEecCCCEEEEe-cCCeEEEEEcCCceEEeeee--cCccccCeEECCCCcEEEEECC-CcEEEEecCC-cEEE
Q 017317 76 LNGPEDVCVDRNGVLYTAT-RDGWIKRLHKNGTWENWKLI--GGDTLLGITTTQENEILVCDAD-KGLLKVTEEG-VTVL 150 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~-~~g~I~~~~~~g~~~~~~~~--~~~p~~gl~~d~~g~L~va~~~-~gl~~~~~~g-~~~l 150 (373)
...|++|++|++|++|+++ .+++|.+++.++++..+... ...|. +++++++|++|+++.. ++|++++.+| .+.+
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~ 97 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVM-CLIVSSLGDIWFTENGANKIGKLSKKGGFTEY 97 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcce-eEEECCCCCEEEEecCCCeEEEECCCCCeEEe
Confidence 5789999999999999988 57899999976776654322 35688 9999999999999864 5688898447 5433
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee--cCCCCcceEEEccC
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DSLFFANGVALSKD 228 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~~~~~~gi~~~~d 228 (373)
.... ....+.+++++++|++|+++.. .+.|+++|++ ++...+. .....|++++++++
T Consensus 98 ~~~~---~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 98 PLPQ---PDSGPYGITEGLNGDIWFTQLN-----------------GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp ECSS---TTCCEEEEEECSTTCEEEEETT-----------------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred cCCC---CCCCCccceECCCCCEEEEccC-----------------CCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 2211 1256889999999999999753 3689999998 6555432 24567899999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeEEe-cCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcch
Q 017317 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFV-ENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPK 307 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~ 307 (373)
|+ +|+++...++|++|+.++ ....+. ......|.++++|++|++|+++...
T Consensus 157 g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~----------------------- 208 (300)
T 2qc5_A 157 NA-LWFTENQNNSIGRITNTG----KLEEYPLPTNAAAPVGITSGNDGALWFVEIMG----------------------- 208 (300)
T ss_dssp SS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEEEETTT-----------------------
T ss_pred CC-EEEEecCCCeEEEECCCC----cEEEeeCCCCCCCcceEEECCCCCEEEEccCC-----------------------
Confidence 98 999998888999998633 222222 1223468899999999999998654
Q ss_pred hhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeEEEeeCC
Q 017317 308 LIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 308 ~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~ 371 (373)
+.+.+++++|+.... ..+.+ ...+..+..+ +|+||+++...+.|.++++.
T Consensus 209 -----------~~i~~~~~~g~~~~~-~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 209 -----------NKIGRITTTGEISEY-DIPTP--NARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp -----------TEEEEECTTCCEEEE-ECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred -----------CEEEEEcCCCcEEEE-ECCCC--CCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 247889988776553 23322 2456777765 58999999988999999874
No 14
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.86 E-value=3.8e-19 Score=159.95 Aligned_cols=230 Identities=13% Similarity=0.176 Sum_probs=169.8
Q ss_pred cCCcceEEEecCCCEEEEec-CCeEEEEEcCCceEEeee--ecCccccCeEECCCCcEEEEEC-CCcEEEEecCC-cEEE
Q 017317 76 LNGPEDVCVDRNGVLYTATR-DGWIKRLHKNGTWENWKL--IGGDTLLGITTTQENEILVCDA-DKGLLKVTEEG-VTVL 150 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~~-~g~I~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~L~va~~-~~gl~~~~~~g-~~~l 150 (373)
...|.++++|++|++|+++. +++|++++.+|+...+.. ....|. +++++++|++|+++. ..++++++.+| ...+
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 139 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKKGGFTEYPLPQPDSGPY-GITEGLNGDIWFTQLNGDRIGKLTADGTIYEY 139 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECSTTCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCCCCeEEecCCCCCCCCc-cceECCCCCEEEEccCCCeEEEECCCCCEEEc
Confidence 46799999999999998875 688999997787765543 235688 999999999999986 35788898547 5433
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee--cCCCCcceEEEccC
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DSLFFANGVALSKD 228 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~~~~~~gi~~~~d 228 (373)
.. . .....+++++++++|++|+++.. .+.|+++|++ ++...+. .....|.+++++++
T Consensus 140 ~~--~-~~~~~~~~i~~d~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 198 (300)
T 2qc5_A 140 DL--P-NKGSYPAFITLGSDNALWFTENQ-----------------NNSIGRITNT-GKLEEYPLPTNAAAPVGITSGND 198 (300)
T ss_dssp EC--S-STTCCEEEEEECTTSSEEEEETT-----------------TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTT
T ss_pred cC--C-CCCCCceeEEECCCCCEEEEecC-----------------CCeEEEECCC-CcEEEeeCCCCCCCcceEEECCC
Confidence 21 1 12356889999999999999853 3689999984 5555432 33567899999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeEEe-cCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcch
Q 017317 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFV-ENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPK 307 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~ 307 (373)
|+ +|+++...++|.+|+.++ ....+. ......|.++++|++|++|+++...
T Consensus 199 g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~----------------------- 250 (300)
T 2qc5_A 199 GA-LWFVEIMGNKIGRITTTG----EISEYDIPTPNARPHAITAGKNSEIWFTEWGA----------------------- 250 (300)
T ss_dssp SS-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECSTTCEEEEETTT-----------------------
T ss_pred CC-EEEEccCCCEEEEEcCCC----cEEEEECCCCCCCceEEEECCCCCEEEeccCC-----------------------
Confidence 97 999998888999998633 222221 1223468899999999999998653
Q ss_pred hhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeEEEeeCC
Q 017317 308 LIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 308 ~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~ 371 (373)
+.+.+++++|+.. .+..+.+. ..+.++..+ +|+||+++. + .|.++++.
T Consensus 251 -----------~~i~~~~~~g~~~-~~~~~~~~--~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 251 -----------NQIGRITNDNTIQ-EYQLQTEN--AEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp -----------TEEEEECTTSCEE-EEECCSTT--CCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred -----------CeEEEECCCCcEE-EEECCccC--CccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 2488999987654 44444322 346667665 689999998 6 89999875
No 15
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.86 E-value=1e-18 Score=157.14 Aligned_cols=232 Identities=14% Similarity=0.237 Sum_probs=171.7
Q ss_pred cCCcceEEEecCCCEEEEec-CCeEEEEEcCCceEEeee--ecCccccCeEECCCCcEEEEECC-CcEEEEecCC-cEEE
Q 017317 76 LNGPEDVCVDRNGVLYTATR-DGWIKRLHKNGTWENWKL--IGGDTLLGITTTQENEILVCDAD-KGLLKVTEEG-VTVL 150 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~~-~g~I~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~L~va~~~-~gl~~~~~~g-~~~l 150 (373)
...|.++++|++|++|+++. +++|.+++.++++..+.. ....|. +++++++|++|+++.. .++++++.++ .+.+
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~ 92 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVM-CLTISSDGEVWFTENAANKIGRITKKGIIKEY 92 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEEEE
T ss_pred CCCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCcee-eEEECCCCCEEEeCCCCCeEEEECCCCcEEEE
Confidence 57899999999999999885 689999997677665542 245688 9999999999999864 5688998556 5444
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee--cCCCCcceEEEccC
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DSLFFANGVALSKD 228 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~~~~~~gi~~~~d 228 (373)
... .....+.+|+++++|++|+++.. .++|+++|+ +++...+. .....|++++++++
T Consensus 93 ~~~---~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 93 TLP---NPDSAPYGITEGPNGDIWFTEMN-----------------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSD 151 (299)
T ss_dssp ECS---STTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred eCC---CcCCCceeeEECCCCCEEEEecC-----------------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCC
Confidence 321 12346889999999999999753 368999998 45555432 23567899999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeEE-ecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcch
Q 017317 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIF-VENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPK 307 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~ 307 (373)
|+ +|+++...++|++++.++ ....+ .......|.++++|++|++|+++...
T Consensus 152 g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~----------------------- 203 (299)
T 2z2n_A 152 NA-LWFTENQNNAIGRITESG----DITEFKIPTPASGPVGITKGNDDALWFVEIIG----------------------- 203 (299)
T ss_dssp SC-EEEEETTTTEEEEECTTC----CEEEEECSSTTCCEEEEEECTTSSEEEEETTT-----------------------
T ss_pred CC-EEEEeCCCCEEEEEcCCC----cEEEeeCCCCCCcceeEEECCCCCEEEEccCC-----------------------
Confidence 97 999998888999998632 22222 21223468899999999999998643
Q ss_pred hhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeEEEeeCC
Q 017317 308 LIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 308 ~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~ 371 (373)
+.+.+++++|+... +..+.. ...+..+..+ +|+||+++...+.|.++++.
T Consensus 204 -----------~~i~~~~~~g~~~~-~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 204 -----------NKIGRITTSGEITE-FKIPTP--NARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp -----------TEEEEECTTCCEEE-EECSST--TCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred -----------ceEEEECCCCcEEE-EECCCC--CCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 24788998777543 433322 2456777775 58999999888999999864
No 16
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.86 E-value=1.2e-19 Score=172.78 Aligned_cols=240 Identities=13% Similarity=0.133 Sum_probs=177.3
Q ss_pred CcCCcceEEEec--CCCEEEEecCCeEEEEEcCC-ceEEeeeecCccccCeEECCCCc-EEEEECCC-----cEEEEecC
Q 017317 75 ILNGPEDVCVDR--NGVLYTATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTTQENE-ILVCDADK-----GLLKVTEE 145 (373)
Q Consensus 75 ~~~~P~~ia~d~--~G~l~v~~~~g~I~~~~~~g-~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~-----gl~~~~~~ 145 (373)
.+..|..|++|+ +|+||+.+..++|.+++.++ +++.+......|. +|+++++|+ |||++... .++.++.+
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~-~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVR-TICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEE-EEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcc-eEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 478999999995 69999888668999999655 5666655567799 999999998 99998632 35556644
Q ss_pred C-cE---EEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee--cCCC
Q 017317 146 G-VT---VLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DSLF 218 (373)
Q Consensus 146 g-~~---~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~~~ 218 (373)
| .. .+. .+..|+++++++ +|+|||++.. .++|++++++++....+. ....
T Consensus 214 g~~~~~~~l~------~~~~p~giavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~~~~~~~~~~~~ 270 (430)
T 3tc9_A 214 SGFKVITELT------KGQNCNGAETHPINGELYFNSWN-----------------AGQVFRYDFTTQETTPLFTIQDSG 270 (430)
T ss_dssp GTSCSEEEEE------ECSSCCCEEECTTTCCEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSS
T ss_pred Cceeeeeeec------cCCCceEEEEeCCCCEEEEEECC-----------------CCEEEEEECCCCcEEEEEEcCCCC
Confidence 4 32 222 245789999999 8999999864 479999999877663332 2345
Q ss_pred CcceEEEccCCCEEEEEeCCCCeEEEEEecCCC--CcceeEEecC--------------CCCCCC-ceeE--------CC
Q 017317 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGES--KEQTEIFVEN--------------LPGGPD-NIKL--------AP 273 (373)
Q Consensus 219 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~--~~~~~~~~~~--------------~~g~p~-~i~~--------d~ 273 (373)
.|++++++++|++|||++..+++|++++.++.. ......+... ....|. ++++ |+
T Consensus 271 ~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~ 350 (430)
T 3tc9_A 271 WEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSD 350 (430)
T ss_dssp CCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSC
T ss_pred cceeEEEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCC
Confidence 799999999999999999999999999877531 1111222211 012466 7777 57
Q ss_pred CCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCC--------CC-----c
Q 017317 274 DGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDP--------NG-----K 340 (373)
Q Consensus 274 dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~--------~g-----~ 340 (373)
+|+||++.... ..|.+++++|++....... +| .
T Consensus 351 ~g~lyvaD~~n----------------------------------~~I~~i~~~G~v~~~~g~g~~~~~G~~dG~~~~~~ 396 (430)
T 3tc9_A 351 EYDFYFCDREN----------------------------------HCIRILTPQGRVTTFAGRGSNGTSGYNDGDLRQEA 396 (430)
T ss_dssp CEEEEEEEGGG----------------------------------TEEEEECTTSEEEEEEECCTTSSSSCBCEETTTTC
T ss_pred CCeEEEEECCC----------------------------------cEEEEECCCCcEEEEEeCCCCCCCcccCCCchhhc
Confidence 79999998864 2578899999776655431 22 1
Q ss_pred eecceeEEEEe--CCEEEEeeCCCCeEEEeeCCC
Q 017317 341 VMSFVTSALEF--DDHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 341 ~~~~~~~~~~~--~g~L~vgs~~~~~i~~~~l~~ 372 (373)
.++.+..+..+ +++||++...+++|.++.+++
T Consensus 397 ~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e~ 430 (430)
T 3tc9_A 397 RFNHPEGIVYDEERECFFIGDRENRRIRKIGYEE 430 (430)
T ss_dssp BCSSEEEEEEETTTTEEEEEEGGGTEEEEEEECC
T ss_pred EeCCCcEEEEECCCCEEEEEECCCCeEEEEccCC
Confidence 35678888877 489999999999999998763
No 17
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.86 E-value=6.1e-19 Score=158.56 Aligned_cols=232 Identities=13% Similarity=0.195 Sum_probs=169.8
Q ss_pred cCCcceEEEecCCCEEEEec-CCeEEEEEcCCceEEeee--ecCccccCeEECCCCcEEEEECC-CcEEEEecCC-cEEE
Q 017317 76 LNGPEDVCVDRNGVLYTATR-DGWIKRLHKNGTWENWKL--IGGDTLLGITTTQENEILVCDAD-KGLLKVTEEG-VTVL 150 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~~-~g~I~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~L~va~~~-~gl~~~~~~g-~~~l 150 (373)
...|.++++|++|++|+++. +++|++++.+|+.+.+.. ....|. +++++++|+||+++.. .++++++.++ ...+
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~ 134 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPY-GITEGPNGDIWFTEMNGNRIGRITDDGKIREY 134 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEEEE
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCce-eeEECCCCCEEEEecCCceEEEECCCCCEEEe
Confidence 46799999999999998875 788999997777765542 245688 9999999999999754 5688888666 4443
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe--ecCCCCcceEEEccC
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL--LDSLFFANGVALSKD 228 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~--~~~~~~~~gi~~~~d 228 (373)
... .....+++++++++|++|+++.. .+.|+++|+ +++...+ ......|.+++++++
T Consensus 135 ~~~---~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~ 193 (299)
T 2z2n_A 135 ELP---NKGSYPSFITLGSDNALWFTENQ-----------------NNAIGRITE-SGDITEFKIPTPASGPVGITKGND 193 (299)
T ss_dssp ECS---STTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred cCC---CCCCCCceEEEcCCCCEEEEeCC-----------------CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCC
Confidence 221 12346889999999999999753 368999999 5666543 234567889999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeEEe-cCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcch
Q 017317 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFV-ENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPK 307 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~ 307 (373)
|+ +|+++...++|.+|+.++ . ...+. ......|.++++|++|++|+++...
T Consensus 194 g~-l~v~~~~~~~i~~~~~~g-~---~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~----------------------- 245 (299)
T 2z2n_A 194 DA-LWFVEIIGNKIGRITTSG-E---ITEFKIPTPNARPHAITAGAGIDLWFTEWGA----------------------- 245 (299)
T ss_dssp SS-EEEEETTTTEEEEECTTC-C---EEEEECSSTTCCEEEEEECSTTCEEEEETTT-----------------------
T ss_pred CC-EEEEccCCceEEEECCCC-c---EEEEECCCCCCCceeEEECCCCCEEEeccCC-----------------------
Confidence 88 999998888999998632 2 22232 1123468899999999999998543
Q ss_pred hhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCCC
Q 017317 308 LIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 308 ~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~~ 372 (373)
+.+.+++++|+ +..+..+.+. ..+..+...+|+||+++. .+.|.++++..
T Consensus 246 -----------~~i~~~d~~g~-~~~~~~~~~~--~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 246 -----------NKIGRLTSNNI-IEEYPIQIKS--AEPHGICFDGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp -----------TEEEEEETTTE-EEEEECSSSS--CCEEEEEECSSCEEEEET-TTEEEEEEEC-
T ss_pred -----------ceEEEECCCCc-eEEEeCCCCC--CccceEEecCCCEEEEec-CCcEEEEEcCc
Confidence 24788998775 4455433322 345666556689999986 67899998763
No 18
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.86 E-value=1.2e-18 Score=164.98 Aligned_cols=238 Identities=10% Similarity=0.096 Sum_probs=169.9
Q ss_pred CcCCcceEEEecCCCEEEEe-cCCeEEEEEcC-CceEEeeeecCccccCeEECCCCc-EEEEECCC--cEEEEe-cCC-c
Q 017317 75 ILNGPEDVCVDRNGVLYTAT-RDGWIKRLHKN-GTWENWKLIGGDTLLGITTTQENE-ILVCDADK--GLLKVT-EEG-V 147 (373)
Q Consensus 75 ~~~~P~~ia~d~~G~l~v~~-~~g~I~~~~~~-g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~--gl~~~~-~~g-~ 147 (373)
.+..|.+|++|++|+||+.+ .+++|.+++.+ ++...+......+. ++++++|+ ||+++... .+++++ ..+ .
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred ccCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 47889999999999999776 56899999965 56665544333333 88998885 78887643 688888 444 3
Q ss_pred -EEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe----ecCC--CC
Q 017317 148 -TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL----LDSL--FF 219 (373)
Q Consensus 148 -~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~----~~~~--~~ 219 (373)
..+.. ........++++++++ +|.||+++. .+.|+++|++++....+ ..+. ..
T Consensus 207 ~~~~g~-~~~~~~~~p~~iav~p~~g~lyv~d~------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 207 PTRIGQ-LGSTFSGKIGAVALDETEEWLYFVDS------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp EEEEEE-CCTTSCSCCCBCEECTTSSEEEEECT------------------TCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred eEEeee-ccchhcCCcEEEEEeCCCCeEEEEEC------------------CCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 23311 1111345789999999 789999764 37899999987776554 2221 22
Q ss_pred cc-eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCC--------------CCCCCceeECCCCCEEEEEe-c
Q 017317 220 AN-GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENL--------------PGGPDNIKLAPDGSFWIAIL-Q 283 (373)
Q Consensus 220 ~~-gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~--------------~g~p~~i~~d~dG~lwva~~-~ 283 (373)
|. ++++++++..||+++..+++|++|+.++. ...+.... ...|.++++|++|+||++.. .
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~ 343 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK 343 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecCCC----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC
Confidence 44 99999976779999999999999987653 22222111 23599999999999999987 5
Q ss_pred CCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCC------CC----ceecceeEEEEe-
Q 017317 284 LSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDP------NG----KVMSFVTSALEF- 351 (373)
Q Consensus 284 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~------~g----~~~~~~~~~~~~- 351 (373)
. ..|.+++ ++|++......+ +| ..+..+..+..+
T Consensus 344 ~----------------------------------~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~ 389 (409)
T 3hrp_A 344 G----------------------------------YCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG 389 (409)
T ss_dssp T----------------------------------CEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS
T ss_pred C----------------------------------CEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC
Confidence 4 2578888 777765444321 11 125678888876
Q ss_pred CCEEEEeeCCCCeEEEeeCC
Q 017317 352 DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 352 ~g~L~vgs~~~~~i~~~~l~ 371 (373)
+|+||++...+++|.++.++
T Consensus 390 ~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 390 EGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp SSEEEEEESTTCEEEEEEEC
T ss_pred CCCEEEEECCCCeEEEEEeC
Confidence 48999999999999999864
No 19
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.83 E-value=1.1e-18 Score=160.40 Aligned_cols=242 Identities=15% Similarity=0.160 Sum_probs=165.4
Q ss_pred CcCCcceEEEecCCCEEEEecCC-------------------------eEEEEEc-CCceEEeee--ecCccccCeEECC
Q 017317 75 ILNGPEDVCVDRNGVLYTATRDG-------------------------WIKRLHK-NGTWENWKL--IGGDTLLGITTTQ 126 (373)
Q Consensus 75 ~~~~P~~ia~d~~G~l~v~~~~g-------------------------~I~~~~~-~g~~~~~~~--~~~~p~~gl~~d~ 126 (373)
.+..|.+|++|++|++|++...+ .|++++. +|+...... ....|. ++++++
T Consensus 22 ~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~-gia~d~ 100 (329)
T 3fvz_A 22 LPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPH-GLSIDT 100 (329)
T ss_dssp CCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEE-EEEECT
T ss_pred ecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCce-EEEECC
Confidence 46789999999999999877544 6999995 477644322 134789 999999
Q ss_pred CCcEEEEECC-CcEEEEecCC-c---EEEeec-cC---CccccccceeEEcC-CCcEEEEeCCccccccccccccccccC
Q 017317 127 ENEILVCDAD-KGLLKVTEEG-V---TVLASH-VN---GSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKP 196 (373)
Q Consensus 127 ~g~L~va~~~-~gl~~~~~~g-~---~~l~~~-~~---~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~ 196 (373)
+|+|||++.. +.|.+++.+| . ..+... .. ...+..|++|++++ +|+|||+++. .
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~----------------~ 164 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGY----------------C 164 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECS----------------S
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCC----------------C
Confidence 9999999875 4577888555 3 222110 01 23455799999999 8999999852 2
Q ss_pred CceEEEEeCCCCeEEEee----------cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEec-CCCCcceeEEec-CCCC
Q 017317 197 HGKLLKYDPSLNETSILL----------DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLK-GESKEQTEIFVE-NLPG 264 (373)
Q Consensus 197 ~g~l~~~d~~~~~~~~~~----------~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~-~~~~~~~~~~~~-~~~g 264 (373)
+++|+++|+++.....+. ..+..|.++++++++..+||++..+++|.+|+.+ |.. ...+.. ....
T Consensus 165 ~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~---~~~~~~~~~~~ 241 (329)
T 3fvz_A 165 NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF---VREIKHASFGR 241 (329)
T ss_dssp CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE---EEEECCTTTTT
T ss_pred CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE---EEEEeccccCC
Confidence 478999997754444432 1245699999999966799999999999999976 321 112211 1112
Q ss_pred CCCceeECC------CCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCC
Q 017317 265 GPDNIKLAP------DGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDP 337 (373)
Q Consensus 265 ~p~~i~~d~------dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~ 337 (373)
.+.++++.+ +|++|++.... ..+..++ .+|+.+..+...
T Consensus 242 ~~~~~~~~pg~~~~~~g~~~v~~~~~----------------------------------~~v~~~~~~~g~~~~~~~~~ 287 (329)
T 3fvz_A 242 NVFAISYIPGFLFAVNGKPYFGDQEP----------------------------------VQGFVMNFSSGEIIDVFKPV 287 (329)
T ss_dssp CEEEEEEETTEEEEEECCCCTTCSCC----------------------------------CCEEEEETTTCCEEEEECCS
T ss_pred CcceeeecCCEEEEeCCCEEeccCCC----------------------------------cEEEEEEcCCCeEEEEEcCC
Confidence 334444444 55555443322 2356677 678888887532
Q ss_pred CCceecceeEEEEe-CCEEEEeeCCCCeEEEeeCC
Q 017317 338 NGKVMSFVTSALEF-DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 338 ~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~ 371 (373)
.+ .+..+..+..+ +|+||++....+.|.++++.
T Consensus 288 ~~-~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 288 RK-HFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp SS-CCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred CC-ccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 22 35678888876 57999999999999999875
No 20
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.83 E-value=1.8e-18 Score=159.84 Aligned_cols=242 Identities=14% Similarity=0.147 Sum_probs=165.7
Q ss_pred eeEeccCCcCCcceEEEecCCCEEEEec---CC--eEEEEEcCCceEEeee-------ecCccccCeEECCCCcEEEEEC
Q 017317 68 VTRLGEGILNGPEDVCVDRNGVLYTATR---DG--WIKRLHKNGTWENWKL-------IGGDTLLGITTTQENEILVCDA 135 (373)
Q Consensus 68 ~~~~~~g~~~~P~~ia~d~~G~l~v~~~---~g--~I~~~~~~g~~~~~~~-------~~~~p~~gl~~d~~g~L~va~~ 135 (373)
++.+.+.. ..|++|+++++|++|++.. ++ +|..++ +|+...+.. ....|. ++++|++|+|||++.
T Consensus 9 ~~~v~~~~-~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~-gv~~d~~g~L~v~D~ 85 (343)
T 2qe8_A 9 LEVVAELS-LAPGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVL-GIKSDGNGIVWMLDN 85 (343)
T ss_dssp CEEEEEES-SCEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEE-EEEECSSSEEEEEEC
T ss_pred eEEEEEcC-CCcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEee-EEEEcCCCcEEEEcC
Confidence 34444432 5899999999999998752 34 788888 776554421 124688 999999999999986
Q ss_pred C------CcEEEEe-cCC-c-EEEee-ccCCccccccceeEEcCC-CcEEEEeCCccccccccccccccccCCceEEEEe
Q 017317 136 D------KGLLKVT-EEG-V-TVLAS-HVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYD 204 (373)
Q Consensus 136 ~------~gl~~~~-~~g-~-~~l~~-~~~~~~~~~~~~l~~~~d-G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d 204 (373)
. ..|+++| .+| . +.+.. .....+...+++++++++ |.+|+++.+. ...++|+++|
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--------------~~~~~i~v~d 151 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--------------DDKAALIRVD 151 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--------------GGGCEEEEEE
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--------------CCCCeEEEEE
Confidence 4 5799999 667 3 33321 111223356899999974 7999998631 0135677777
Q ss_pred CCCCeEEEeecC------------------------------CCCcceEEEccCCCEEEEEeCCCCeEEEEEec---CCC
Q 017317 205 PSLNETSILLDS------------------------------LFFANGVALSKDEDYLVVCETFKFRCLKYWLK---GES 251 (373)
Q Consensus 205 ~~~~~~~~~~~~------------------------------~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~---~~~ 251 (373)
.++++......+ ...++|+++++||+.||+++...+++++++.. ...
T Consensus 152 ~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~ 231 (343)
T 2qe8_A 152 LQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQ 231 (343)
T ss_dssp TTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTT
T ss_pred CCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCC
Confidence 765554433211 12479999999999999999988899999853 111
Q ss_pred Ccc------eeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC
Q 017317 252 KEQ------TEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA 325 (373)
Q Consensus 252 ~~~------~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~ 325 (373)
... +.... ..+.|+++++|++|++|++.... +.|.+++
T Consensus 232 ~~~~~~~~~~~~~g--~~g~pdgia~d~~G~l~va~~~~----------------------------------~~V~~~d 275 (343)
T 2qe8_A 232 LTDAELGSKIERYS--EKPICDGISIDKDHNIYVGDLAH----------------------------------SAIGVIT 275 (343)
T ss_dssp CCHHHHHTTCEEEE--ECCSCSCEEECTTCCEEEEEGGG----------------------------------TEEEEEE
T ss_pred CChhhhhcceEecc--cCCCCceEEECCCCCEEEEccCC----------------------------------CeEEEEE
Confidence 111 11111 13479999999999999998764 2588999
Q ss_pred C-CCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeE
Q 017317 326 A-NGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFI 365 (373)
Q Consensus 326 ~-~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i 365 (373)
+ +|+......++. ...++++..+ +++||+.+...+++
T Consensus 276 ~~~G~~~~~~~~~~---~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 276 SADRAYKLLVTDEK---LSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp TTTTEEEEEEECGG---GSCEEEEEECTTSCEEEEECCGGGS
T ss_pred CCCCCEEEEEECCc---eecCCeeEECCCCcEEEEeCccccc
Confidence 8 887655555432 4568888875 58999998754433
No 21
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.82 E-value=8.3e-18 Score=155.93 Aligned_cols=262 Identities=16% Similarity=0.162 Sum_probs=171.3
Q ss_pred ceeEeccCCcCCcceEEEecCCCEEEEecCCeEEEEEcCCceEEeee------ecCccccCeEECCC----CcEEEEECC
Q 017317 67 SVTRLGEGILNGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKL------IGGDTLLGITTTQE----NEILVCDAD 136 (373)
Q Consensus 67 ~~~~~~~g~~~~P~~ia~d~~G~l~v~~~~g~I~~~~~~g~~~~~~~------~~~~p~~gl~~d~~----g~L~va~~~ 136 (373)
+++.++++ +..|++|+++++|+||++...|+|++++.+|+ +.+.. ....++ ||+++++ |.|||+...
T Consensus 20 ~~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~~d~~G~-~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lyv~~~~ 96 (354)
T 3a9g_A 20 KISEVASD-LEVPWSIAPLGGGRYLVTERPGRLVLISPSGK-KLVASFDVANVGEAGLL-GLALHPEFPKKSWVYLYASY 96 (354)
T ss_dssp EEEEEECS-CSCEEEEEEEETTEEEEEETTTEEEEECSSCE-EEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEE
T ss_pred EEEEEeCC-CCCCeEEEEcCCCeEEEEeCCCEEEEEeCCCc-eEeeccceeecCCCcee-eEEeCCCCCcCCEEEEEEec
Confidence 56677776 89999999999999999998899999987777 44432 235688 9999986 899998753
Q ss_pred --------CcEEEEe-cCC------cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEE
Q 017317 137 --------KGLLKVT-EEG------VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLL 201 (373)
Q Consensus 137 --------~gl~~~~-~~g------~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~ 201 (373)
..|.+++ ..+ .+.+....+....+.+++|++++||.|||++... +.....++ .....|+|+
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~--~~~~~~~d--~~~~~G~I~ 172 (354)
T 3a9g_A 97 FAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDA--ADPRLAQD--LSSLAGKIL 172 (354)
T ss_dssp ECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCT--TCGGGGTC--TTCCSSEEE
T ss_pred cCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCC--CCCccccC--CCCCCeEEE
Confidence 5688887 322 2233333333345678899999999999997542 11111111 123458999
Q ss_pred EEeCCCC--------eEEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEe--cCCCCcce------------eE-E
Q 017317 202 KYDPSLN--------ETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWL--KGESKEQT------------EI-F 258 (373)
Q Consensus 202 ~~d~~~~--------~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~--~~~~~~~~------------~~-~ 258 (373)
|+++++. ..+.+..++.+|+|++++++...||+++...++...++. .+...+.. .. +
T Consensus 173 ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 252 (354)
T 3a9g_A 173 RVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVI 252 (354)
T ss_dssp EECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred EEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEe
Confidence 9999854 346778889999999999943349999988765333321 22222110 00 1
Q ss_pred ec-CCCCCCCceeE-------CCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC--CCC
Q 017317 259 VE-NLPGGPDNIKL-------APDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA--ANG 328 (373)
Q Consensus 259 ~~-~~~g~p~~i~~-------d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~--~~g 328 (373)
.- .....|.++++ +.+|++|++...+. .|.+++ .+|
T Consensus 253 ~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~----------------------------------~v~~~~~~~~g 298 (354)
T 3a9g_A 253 DTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGS----------------------------------MLAAVNFGDNM 298 (354)
T ss_dssp ECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTT----------------------------------EEEEEEECGGG
T ss_pred ecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCC----------------------------------EEEEEEECCCC
Confidence 00 12235888888 57899999987542 244444 345
Q ss_pred cEE--EEEeCCCCceecceeEEEEe-CCEEEEeeCCCC----------eEEEeeCCC
Q 017317 329 IVI--RKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTN----------FIGKLPLKA 372 (373)
Q Consensus 329 ~~~--~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~----------~i~~~~l~~ 372 (373)
+.. ..+-. +. ...+..+... +|.||+.+...+ .|.|+...+
T Consensus 299 ~~~~~~~~~~--~~-~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 299 EVRKISTFFK--NV-FGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp CEEEEEEECT--TT-SCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred cccceeeecc--CC-CCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 443 22321 11 2346777766 689999997422 799987653
No 22
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.80 E-value=9.7e-18 Score=155.47 Aligned_cols=209 Identities=15% Similarity=0.157 Sum_probs=140.7
Q ss_pred ceeEeccCCcCCcceEEEecCCCEEEEecCCeEEEEEcCCceEEeee------ecCccccCeEECCC----CcEEEEECC
Q 017317 67 SVTRLGEGILNGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKL------IGGDTLLGITTTQE----NEILVCDAD 136 (373)
Q Consensus 67 ~~~~~~~g~~~~P~~ia~d~~G~l~v~~~~g~I~~~~~~g~~~~~~~------~~~~p~~gl~~d~~----g~L~va~~~ 136 (373)
+++.++++ +..|++|+++++|+||+++..|+|++++ +|+.+.+.. ....|+ ||+++++ +.|||++..
T Consensus 22 ~~~~va~~-l~~P~~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~-gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 22 RVEEVVGG-LEVPWALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLL-GLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp CEEEEECC-CSCEEEEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEEEE
T ss_pred EEEEEECC-CCCceEEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCce-eEEECCCCCCCCEEEEEEec
Confidence 56677776 8899999999999999999889999998 776554432 235789 9999987 789999753
Q ss_pred ------CcEEEEe-cCC-c---EEEeeccC--CccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEE
Q 017317 137 ------KGLLKVT-EEG-V---TVLASHVN--GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKY 203 (373)
Q Consensus 137 ------~gl~~~~-~~g-~---~~l~~~~~--~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 203 (373)
..|.+++ ..+ + +.+....+ ....+.+++|++++||.|||++... +.....++ .....|+|+|+
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~--~~~~~~~d--~~~~~g~I~ri 174 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEV--YERELAQD--LASLGGKILRL 174 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCT--TCGGGGGC--TTCSSSEEEEE
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCC--CCCccccC--CCCCceEEEEE
Confidence 5688888 433 2 23333333 2345678899999999999997542 11111111 12345899999
Q ss_pred eCCC-------------CeEEEeecCCCCcceEEEccCCCEEEEEeCCCCe--------EEEEEecCCCCcce-------
Q 017317 204 DPSL-------------NETSILLDSLFFANGVALSKDEDYLVVCETFKFR--------CLKYWLKGESKEQT------- 255 (373)
Q Consensus 204 d~~~-------------~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~--------i~~~~~~~~~~~~~------- 255 (373)
++++ ...+.+..++.+|.|++++++...||+++.+.++ |.++. .+...+..
T Consensus 175 ~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~-~G~nyGwp~~~g~~~ 253 (352)
T 2ism_A 175 TPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV-PGGNYGWPRVVGRGN 253 (352)
T ss_dssp CTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEEC-TTCBCCTTTCCSCCC
T ss_pred cCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec-cCCcCCCCcccCCCC
Confidence 9985 2445667788999999999944449999988776 44432 23222110
Q ss_pred ------eEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 256 ------EIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 256 ------~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
..+.-.....|.++++ .+|++|++...+
T Consensus 254 ~~~~~~p~~~~~~~~ap~G~~~-~~G~l~v~~~~~ 287 (352)
T 2ism_A 254 DPRYRDPLYFWPQGFPPGNLAF-FRGDLYVAGLRG 287 (352)
T ss_dssp CTTSCCCSEECTTCCCEEEEEE-ETTEEEEEETTT
T ss_pred CCCCcCCeEecCCCCCCcceEE-ECCEEEEEECCC
Confidence 0000011235788888 689999998754
No 23
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.78 E-value=3.6e-17 Score=167.69 Aligned_cols=228 Identities=12% Similarity=0.172 Sum_probs=166.8
Q ss_pred cceEEEecCCCEEEEecCCeEEEEEc-CCceEEeeee---------cCccccCeEECCCCc-EEEEECCCcEEEEe-cCC
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLI---------GGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG 146 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~~-~g~~~~~~~~---------~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g 146 (373)
..+++.|++|+||+|+.+++|.++++ .++++.+... ..... +++.|++|+ ||+++...||++++ .++
T Consensus 359 V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK-AVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE-EEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred eEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE-EEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 45788999999999999989999994 4566655321 12345 788899999 99999878999999 566
Q ss_pred -cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-----C--C
Q 017317 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-----L--F 218 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-----~--~ 218 (373)
.+.+...........+.+++.|++|+||+++. ++|+++|+++++++.+... + .
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-------------------SALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-------------------SCEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-------------------CceeEEeCCCCeEEEccccccccccCCc
Confidence 66554322223335678899999999999974 4799999998887765422 1 2
Q ss_pred CcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEec--CCCC----CCCceeECCCCCEEEEEecCCCchhhhc
Q 017317 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE--NLPG----GPDNIKLAPDGSFWIAILQLSSPGLEFV 292 (373)
Q Consensus 219 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~g----~p~~i~~d~dG~lwva~~~~~~~~~~~~ 292 (373)
....+..+++|+ +|++.. ++|++|+.++... .+.. ...+ ....++.|++|+||+++..+
T Consensus 499 ~i~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~----~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~G-------- 563 (795)
T 4a2l_A 499 QITTLFRDSHKR-LWIGGE--EGLSVFKQEGLDI----QKASILPVSNVTKLFTNCIYEASNGIIWVGTREG-------- 563 (795)
T ss_dssp CEEEEEECTTCC-EEEEES--SCEEEEEEETTEE----EECCCSCSCGGGGSCEEEEEECTTSCEEEEESSC--------
T ss_pred eEEEEEECCCCC-EEEEeC--CceEEEeCCCCeE----EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCCC--------
Confidence 234677888887 998875 5799998765432 2211 1112 23457889999999999865
Q ss_pred cCChHHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeEEEeeCC
Q 017317 293 HTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 293 ~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~ 371 (373)
+.+++++.+.+..+...+|...+.+.++.++ +|+||+++. +.|.++++.
T Consensus 564 ----------------------------l~~~d~~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t~--~Gl~~~~~~ 613 (795)
T 4a2l_A 564 ----------------------------FYCFNEKDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLSTN--RGISCFNPE 613 (795)
T ss_dssp ----------------------------EEEEETTTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEET--TEEEEEETT
T ss_pred ----------------------------ceeECCCCCcEEEeCCCCCCchhheEEEEECCCCCEEEEcC--CceEEEcCC
Confidence 7899988888888877777666677778776 689999995 559988865
No 24
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=2.4e-16 Score=150.40 Aligned_cols=243 Identities=14% Similarity=0.149 Sum_probs=172.7
Q ss_pred cCCcCCcceEEEec--CCCEEEEec-CCeEEEEEc-CCceEEeeeec----CccccCeEE-------CCCCc-EEEEECC
Q 017317 73 EGILNGPEDVCVDR--NGVLYTATR-DGWIKRLHK-NGTWENWKLIG----GDTLLGITT-------TQENE-ILVCDAD 136 (373)
Q Consensus 73 ~g~~~~P~~ia~d~--~G~l~v~~~-~g~I~~~~~-~g~~~~~~~~~----~~p~~gl~~-------d~~g~-L~va~~~ 136 (373)
++.+..|..|++|| +++||+... +++|.++|. ++.++.+.... .+|. +|++ +++|+ |||++..
T Consensus 135 ~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~-~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIR-SIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp CBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEE-EEEECCCBTTTBCTTCEEEEEECC
T ss_pred ccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCc-EEEEeecccccCCCCCEEEEEeCC
Confidence 34467899999997 589998774 477999994 45666654332 3588 9999 99997 9999875
Q ss_pred C-------cEEEEe--cCC-c------EEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCce
Q 017317 137 K-------GLLKVT--EEG-V------TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGK 199 (373)
Q Consensus 137 ~-------gl~~~~--~~g-~------~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~ 199 (373)
. .++.++ .+| + ..+. ....++++++++ +|.||+++.. .+.
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~------~~~~p~giavdp~~g~LYvtd~~-----------------~g~ 270 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIA------AYKQCNGATIHPINGELYFNSYE-----------------KGQ 270 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEE------EESCCCCEEECTTTCCEEEEETT-----------------TTE
T ss_pred CCCcccCceEEEEecCCCCceeecccceeec------cCCCceEEEEcCCCCeEEEEECC-----------------CCE
Confidence 4 266775 334 3 2332 235788999999 6799999864 578
Q ss_pred EEEEeCC-------CCeE------------EEe--ecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCC--ccee
Q 017317 200 LLKYDPS-------LNET------------SIL--LDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESK--EQTE 256 (373)
Q Consensus 200 l~~~d~~-------~~~~------------~~~--~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~--~~~~ 256 (373)
|+++|++ ++.. +.+ ......|.+++++++|+.||++++.+++|++++.++... ....
T Consensus 271 V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~ 350 (496)
T 3kya_A 271 VFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPY 350 (496)
T ss_dssp EEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCE
T ss_pred EEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccE
Confidence 9999987 5543 122 123356889999999999999999999999988765321 1112
Q ss_pred EEecC--C------------CCCCC-ceeEC-------CCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccC
Q 017317 257 IFVEN--L------------PGGPD-NIKLA-------PDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAP 314 (373)
Q Consensus 257 ~~~~~--~------------~g~p~-~i~~d-------~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 314 (373)
.+... . ...|. +++.| .+|+|||+....
T Consensus 351 ~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N------------------------------ 400 (496)
T 3kya_A 351 NFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLN------------------------------ 400 (496)
T ss_dssp EEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGG------------------------------
T ss_pred EecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCC------------------------------
Confidence 22211 1 12477 77887 789999999764
Q ss_pred CCccEEEEEECCCCcEEEEEeC--------------CCC-----ceecceeEEEEeC--CEEEEeeCCCCeEEEeeCCCC
Q 017317 315 LHKKAAVVNVAANGIVIRKFED--------------PNG-----KVMSFVTSALEFD--DHLYLGSLNTNFIGKLPLKAT 373 (373)
Q Consensus 315 ~~~~g~v~~~~~~g~~~~~~~~--------------~~g-----~~~~~~~~~~~~~--g~L~vgs~~~~~i~~~~l~~~ 373 (373)
..|.+++++|.+...... .+| ..++.+..+..+. |.|||+...+++|.++.+.++
T Consensus 401 ----~rIr~i~~~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 401 ----FCVRKVTPEGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp ----TEEEEECTTCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred ----CEEEEEeCCCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 257889999976554432 122 1367788888763 899999999999999998753
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.76 E-value=3.1e-16 Score=143.92 Aligned_cols=212 Identities=14% Similarity=0.107 Sum_probs=148.7
Q ss_pred cCCcceEEEecCCCEEEEe-cCCeEEEEE-cCCceEEeeeecC------ccccCeEECCCCcEEEEEC--CCcEEEEe-c
Q 017317 76 LNGPEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGG------DTLLGITTTQENEILVCDA--DKGLLKVT-E 144 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~-~~g~I~~~~-~~g~~~~~~~~~~------~p~~gl~~d~~g~L~va~~--~~gl~~~~-~ 144 (373)
...|+.++++++|++|+++ .++.|.++| .+++......... .|. +|++ .+++|||++. ...|..+| .
T Consensus 83 ~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~-~i~~-~~~~lyv~~~~~~~~v~viD~~ 160 (328)
T 3dsm_A 83 FTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE-QMVQ-YGKYVYVNCWSYQNRILKIDTE 160 (328)
T ss_dssp CSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC-CEEE-ETTEEEEEECTTCCEEEEEETT
T ss_pred CCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc-eEEE-ECCEEEEEcCCCCCEEEEEECC
Confidence 4789999998889999988 789999999 4555543333344 788 9999 5789999985 45688888 5
Q ss_pred CC-c-EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec--CCCCc
Q 017317 145 EG-V-TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--SLFFA 220 (373)
Q Consensus 145 ~g-~-~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--~~~~~ 220 (373)
++ . ..+.. + ..|++++++++|++|+++... +.. .. .....+.|+++|++++++..... ....|
T Consensus 161 t~~~~~~i~~---g---~~p~~i~~~~dG~l~v~~~~~-~~~-----~~-~~~~~~~v~~id~~t~~v~~~~~~~~g~~p 227 (328)
T 3dsm_A 161 TDKVVDELTI---G---IQPTSLVMDKYNKMWTITDGG-YEG-----SP-YGYEAPSLYRIDAETFTVEKQFKFKLGDWP 227 (328)
T ss_dssp TTEEEEEEEC---S---SCBCCCEECTTSEEEEEBCCB-CTT-----CS-SCBCCCEEEEEETTTTEEEEEEECCTTCCC
T ss_pred CCeEEEEEEc---C---CCccceEEcCCCCEEEEECCC-ccC-----Cc-cccCCceEEEEECCCCeEEEEEecCCCCCc
Confidence 66 3 22211 1 357899999999999997541 000 00 00113689999999887654332 23479
Q ss_pred ceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECC-CCCEEEEEecCCCchhhhccCChHHH
Q 017317 221 NGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAILQLSSPGLEFVHTSKATK 299 (373)
Q Consensus 221 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-dG~lwva~~~~~~~~~~~~~~~p~~~ 299 (373)
+++++++|++.+|+++. .|++++..+.+.... .+.......|+++++|+ +|++|++....
T Consensus 228 ~~la~~~d~~~lyv~~~---~v~~~d~~t~~~~~~-~~~~~~~~~p~gi~vdp~~g~lyva~~~~--------------- 288 (328)
T 3dsm_A 228 SEVQLNGTRDTLYWINN---DIWRMPVEADRVPVR-PFLEFRDTKYYGLTVNPNNGEVYVADAID--------------- 288 (328)
T ss_dssp EEEEECTTSCEEEEESS---SEEEEETTCSSCCSS-CSBCCCSSCEEEEEECTTTCCEEEEECTT---------------
T ss_pred eeEEEecCCCEEEEEcc---EEEEEECCCCceeee-eeecCCCCceEEEEEcCCCCeEEEEcccc---------------
Confidence 99999999999999975 799999765443211 12211135799999997 78999998321
Q ss_pred HHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeC
Q 017317 300 HLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFED 336 (373)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~ 336 (373)
-...+.|.+|+++|+.+..+..
T Consensus 289 ---------------y~~~~~V~v~d~~g~~~~~i~~ 310 (328)
T 3dsm_A 289 ---------------YQQQGIVYRYSPQGKLIDEFYV 310 (328)
T ss_dssp ---------------SSSEEEEEEECTTCCEEEEEEE
T ss_pred ---------------cccCCEEEEECCCCCEEEEEEe
Confidence 1113568999999999988854
No 26
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.76 E-value=2.9e-16 Score=145.34 Aligned_cols=190 Identities=14% Similarity=0.140 Sum_probs=141.1
Q ss_pred eEeccCCcCCcceEEEec-CCCEEEEe-cCCeEEEEEcCCc-eEEee-eecCccccCeEECC-CCcEEEEECCC-cEEEE
Q 017317 69 TRLGEGILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-WENWK-LIGGDTLLGITTTQ-ENEILVCDADK-GLLKV 142 (373)
Q Consensus 69 ~~~~~g~~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g~-~~~~~-~~~~~p~~gl~~d~-~g~L~va~~~~-gl~~~ 142 (373)
+.+..+ +..|.++++|+ ++.||+.+ .+++|++++.+|. .+.+. .....|. ||++|. .|+||+++... .|.++
T Consensus 66 ~~~~~~-~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~ly~~d~~~~~I~~~ 143 (349)
T 3v64_C 66 TLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVA 143 (349)
T ss_dssp EEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEE
T ss_pred EEeecC-CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc-EEEEecCCCeEEEEcCCCCeEEEE
Confidence 334444 67899999995 88999665 6789999997764 33332 2346788 999995 67899998754 57777
Q ss_pred ecCC--cEEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCC
Q 017317 143 TEEG--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLF 218 (373)
Q Consensus 143 ~~~g--~~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~ 218 (373)
+.+| .+.+.. ..+..|++|++|| +|.||+++.. ..++|++++.++...+.+. .++.
T Consensus 144 ~~dG~~~~~l~~----~~l~~P~~iavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~ 203 (349)
T 3v64_C 144 NLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLF 203 (349)
T ss_dssp ETTSCSCEEEEC----TTCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEESCCSSCS
T ss_pred cCCCCceEEEEe----CCCCCcceEEEecCcCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCC
Confidence 7556 444432 2345789999997 5789999864 1378999999866555543 5688
Q ss_pred CcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 219 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
.|+|++++++++.|||+++..++|.+++++|.. ...+.......|++++++ +|++|++.+..
T Consensus 204 ~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~~ 265 (349)
T 3v64_C 204 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWHT 265 (349)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETTT
T ss_pred CcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc---eEEEEeCCCCCceEEEEE-CCEEEEecCCC
Confidence 899999999888999999999999999988742 223333334689999995 67899998765
No 27
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.76 E-value=6.8e-16 Score=142.86 Aligned_cols=227 Identities=13% Similarity=0.133 Sum_probs=165.1
Q ss_pred ceEEEecCCCEEEEecCCeEEEEEcCC-ceEEeeeecCccccCeEEC-CCCcEEEEECC-CcEEEEecCC--cEEEeecc
Q 017317 80 EDVCVDRNGVLYTATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTT-QENEILVCDAD-KGLLKVTEEG--VTVLASHV 154 (373)
Q Consensus 80 ~~ia~d~~G~l~v~~~~g~I~~~~~~g-~~~~~~~~~~~p~~gl~~d-~~g~L~va~~~-~gl~~~~~~g--~~~l~~~~ 154 (373)
.+.+.++++.|+++.. ..|.+++.+| ..+.+......|. ++++| .++.||+++.. +.|++++.+| .+.+..
T Consensus 37 ~C~~~~~~~~ll~~~~-~~I~~i~~~g~~~~~~~~~~~~~~-~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-- 112 (349)
T 3v64_C 37 SCKALGPEPVLLFANR-IDIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-- 112 (349)
T ss_dssp CEEESSSCCEEEEECB-SCEEEECTTSCCEEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--
T ss_pred cccccccCceeEeecc-cceEEEeCCCCeeEEeecCCCceE-EEEEeccccEEEEEeccCCceEEEecCCCCceEEEe--
Confidence 3455556677777664 4599998766 4455555567789 99999 56789999865 4578888444 444432
Q ss_pred CCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcceEEEccCCCEE
Q 017317 155 NGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDEDYL 232 (373)
Q Consensus 155 ~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~gi~~~~dg~~l 232 (373)
.....|.+|++|+ +|+||+++.. .++|++++.++...+.+. ..+..|++++++|++..|
T Consensus 113 --~~~~~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~l 173 (349)
T 3v64_C 113 --TGLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTI 173 (349)
T ss_dssp --SSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEE
T ss_pred --CCCCCccEEEEecCCCeEEEEcCC-----------------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeE
Confidence 1234688999996 6799999864 468999998866555444 567889999999988889
Q ss_pred EEEeCCC-CeEEEEEecCCCCcceeEEecCCCCCCCceeECC-CCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhh
Q 017317 233 VVCETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIK 310 (373)
Q Consensus 233 ~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 310 (373)
||++... ++|++++++|... ..+.......|+++++|+ +|+||++....
T Consensus 174 y~td~~~~~~I~r~~~dG~~~---~~~~~~~~~~PnGla~d~~~~~lY~aD~~~-------------------------- 224 (349)
T 3v64_C 174 YWTDWGNTPRIEASSMDGSGR---RIIADTHLFWPNGLTIDYAGRRMYWVDAKH-------------------------- 224 (349)
T ss_dssp EEEECSSSCEEEEEETTSCSC---EESCCSSCSCEEEEEEETTTTEEEEEETTT--------------------------
T ss_pred EEeccCCCCEEEEEeCCCCCc---EEEEECCCCCcceEEEeCCCCEEEEEECCC--------------------------
Confidence 9999988 9999999887432 222222334799999995 66899998754
Q ss_pred hccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEee
Q 017317 311 LVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLP 369 (373)
Q Consensus 311 ~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~ 369 (373)
+.|.+++.+|+..+.+-... ...+.++...+++||+....++.|.+++
T Consensus 225 --------~~I~~~~~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 225 --------HVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp --------TEEEEEETTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEE
T ss_pred --------CEEEEEeCCCCceEEEEeCC---CCCceEEEEECCEEEEecCCCCeEEEEE
Confidence 24788888886544443222 3456777777899999999999999997
No 28
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.76 E-value=2.8e-16 Score=160.84 Aligned_cols=230 Identities=12% Similarity=0.143 Sum_probs=161.8
Q ss_pred cceEEEecCCCEEEEecCCeEEEEEc-CCceEEeeee----------cCccccCeEECCCCcEEEEECCCcEEEEec-CC
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLI----------GGDTLLGITTTQENEILVCDADKGLLKVTE-EG 146 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~~-~g~~~~~~~~----------~~~p~~gl~~d~~g~L~va~~~~gl~~~~~-~g 146 (373)
..+|+.|++|+||+|+.+++|.+++. .+.++.+... ..... +++.|++|+||+++...||.+++. ++
T Consensus 315 v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt~~~Gl~~~~~~~~ 393 (781)
T 3v9f_A 315 ARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVS-SVCDDGQGKLWIGTDGGGINVFENGKR 393 (781)
T ss_dssp EEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEE-EEEECTTSCEEEEEBSSCEEEEETTEE
T ss_pred EEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceE-EEEEcCCCCEEEEeCCCcEEEEECCCC
Confidence 45788999999999998899999984 3455554321 12345 788999999999987789999994 44
Q ss_pred -cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC---CCCcce
Q 017317 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS---LFFANG 222 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~---~~~~~g 222 (373)
.+.+. ...+.....+.+|+.|++|+||+++.. ++|+++|+++++++.+... ......
T Consensus 394 ~~~~~~-~~~~~~~~~v~~i~~d~~g~lWigt~~------------------~Gl~~~~~~~~~~~~~~~~~~~~~~v~~ 454 (781)
T 3v9f_A 394 VAIYNK-ENRELLSNSVLCSLKDSEGNLWFGTYL------------------GNISYYNTRLKKFQIIELEKNELLDVRV 454 (781)
T ss_dssp EEECC------CCCSBEEEEEECTTSCEEEEETT------------------EEEEEECSSSCEEEECCSTTTCCCCEEE
T ss_pred eEEEcc-CCCCCCCcceEEEEECCCCCEEEEecc------------------CCEEEEcCCCCcEEEeccCCCCCCeEEE
Confidence 33331 111223356788999999999999743 6899999988887765431 123345
Q ss_pred EEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCC-----CCCCCceeECCCCCEEEEEecCCCchhhhccCChH
Q 017317 223 VALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENL-----PGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKA 297 (373)
Q Consensus 223 i~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~ 297 (373)
+..+++|+ +|++.. .+|++|+..+.+.. .+.... ...+..++.|++|+||+++.+.
T Consensus 455 i~~d~~g~-lwigt~--~Gl~~~~~~~~~~~---~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~------------- 515 (781)
T 3v9f_A 455 FYEDKNKK-IWIGTH--AGVFVIDLASKKVI---HHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGG------------- 515 (781)
T ss_dssp EEECTTSE-EEEEET--TEEEEEESSSSSCC---EEECTTTSSCSCSCEEEEEECTTCCEEEEESSS-------------
T ss_pred EEECCCCC-EEEEEC--CceEEEeCCCCeEE---ecccCcccccccceeEEEEEcCCCCEEEEEcCC-------------
Confidence 66777775 888865 68999996543322 222111 1345568899999999999743
Q ss_pred HHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeE-EEeeCC
Q 017317 298 TKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFI-GKLPLK 371 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i-~~~~l~ 371 (373)
++++++++++.+..+....+...+.+..+.++ +|+||+|+. +.+ .+++..
T Consensus 516 ----------------------Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~Glv~~~d~~ 567 (781)
T 3v9f_A 516 ----------------------GVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--EGLVCFPSAR 567 (781)
T ss_dssp ----------------------CEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET--TEEEEESCTT
T ss_pred ----------------------CEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--CCceEEECCC
Confidence 27899998888888876666656677888775 689999997 447 777654
No 29
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.75 E-value=2.9e-16 Score=147.37 Aligned_cols=190 Identities=14% Similarity=0.135 Sum_probs=139.9
Q ss_pred eEeccCCcCCcceEEEec-CCCEEEEe-cCCeEEEEEcCCc-eEEee-eecCccccCeEECC-CCcEEEEECCC-cEEEE
Q 017317 69 TRLGEGILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-WENWK-LIGGDTLLGITTTQ-ENEILVCDADK-GLLKV 142 (373)
Q Consensus 69 ~~~~~g~~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g~-~~~~~-~~~~~p~~gl~~d~-~g~L~va~~~~-gl~~~ 142 (373)
..+..+ +..|.++++|+ ++.||+.+ .+++|++++.+|. .+.+. .....|. ||++|. .|+||+++... .|.++
T Consensus 109 ~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~lY~~d~~~~~I~~~ 186 (386)
T 3v65_B 109 TLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVA 186 (386)
T ss_dssp EEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC-CEEEETTTTEEEEEETTTTEEEEC
T ss_pred EEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc-EEEEEeCCCeEEEEcCCCCeEEEE
Confidence 344444 67899999995 78899665 7789999997764 33332 3345789 999995 67899998764 46666
Q ss_pred ecCC--cEEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-ecCCC
Q 017317 143 TEEG--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLF 218 (373)
Q Consensus 143 ~~~g--~~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~ 218 (373)
+.+| .+.+.. ..+..|++|++|| +|.||+++.. ..++|+++++++...+.+ ..++.
T Consensus 187 ~~dg~~~~~l~~----~~l~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~~~ 246 (386)
T 3v65_B 187 NLDGAHRKVLLW----QSLEKPRAIALHPMEGTIYWTDWG----------------NTPRIEASSMDGSGRRIIADTHLF 246 (386)
T ss_dssp BTTSCSCEEEEC----SSCSCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCS
T ss_pred eCCCCceEEeec----CCCCCCcEEEEEcCCCeEEEeccC----------------CCCEEEEEeCCCCCcEEEEECCCC
Confidence 6555 444432 2345789999997 5689999864 137899999986655544 35678
Q ss_pred CcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 219 FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 219 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
.|+||+++++++.|||+++..++|.+++++|.. ...+.......|++++++ +|++|++.+..
T Consensus 247 ~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~giav~-~~~ly~td~~~ 308 (386)
T 3v65_B 247 WPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH---RKAVISQGLPHPFAITVF-EDSLYWTDWHT 308 (386)
T ss_dssp CEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS---CEEEECSSCSSEEEEEEE-TTEEEEEETTT
T ss_pred CeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe---eEEEEECCCCCceEEEEE-CCEEEEeeCCC
Confidence 899999999888899999999999999987632 223333334589999995 56899998764
No 30
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.75 E-value=2.6e-16 Score=139.57 Aligned_cols=185 Identities=14% Similarity=0.218 Sum_probs=135.5
Q ss_pred CcCCcceEEEecCCCEEEEecCCeEEEEEcCCceE-Eeee-ecCccccCeEECCCCcEEEEECC-CcEEEEec-CCcEEE
Q 017317 75 ILNGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWE-NWKL-IGGDTLLGITTTQENEILVCDAD-KGLLKVTE-EGVTVL 150 (373)
Q Consensus 75 ~~~~P~~ia~d~~G~l~v~~~~g~I~~~~~~g~~~-~~~~-~~~~p~~gl~~d~~g~L~va~~~-~gl~~~~~-~g~~~l 150 (373)
.+..|.+|+++++|+||+++.+++|++++.++... .+.. ....|. +++++++|+||+++.. ..|++++. +.....
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPE-GLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV 143 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEE-EEEECTTCCEEEEEGGGTEEEEECTTCCSCEE
T ss_pred CcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCc-ceEECCCCCEEEEECCCCEEEEEECCCceeEe
Confidence 35679999999999999988788999999766433 2221 225688 9999999999999754 45888873 232222
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-ecCCCCcceEEEccCC
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVALSKDE 229 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~~gi~~~~dg 229 (373)
.. ......+++|+++++|++|+++.. .++|+++|++++..... ...+..|.+++++++|
T Consensus 144 ~~---~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g 203 (270)
T 1rwi_B 144 LP---FTGLNDPDGVAVDNSGNVYVTDTD-----------------NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG 203 (270)
T ss_dssp CC---CCSCCSCCCEEECTTCCEEEEEGG-----------------GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC
T ss_pred ec---cccCCCceeEEEeCCCCEEEEECC-----------------CCEEEEEecCCCceEeecccCCCCceEEEECCCC
Confidence 11 122356889999999999999853 36899999987665443 2345779999999999
Q ss_pred CEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 230 DYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
+ +|+++..+++|.+|+.++.... .........|.++++|++|++|++....
T Consensus 204 ~-l~v~~~~~~~v~~~~~~~~~~~---~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 204 T-VYVTEHNTNQVVKLLAGSTTST---VLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp C-EEEEETTTSCEEEECTTCSCCE---ECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred C-EEEEECCCCcEEEEcCCCCcce---eeccCCCCCceeEEECCCCCEEEEECCC
Confidence 5 9999998899999987653221 1111112468899999999999998754
No 31
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.75 E-value=5.9e-16 Score=141.36 Aligned_cols=184 Identities=11% Similarity=0.094 Sum_probs=135.1
Q ss_pred cCCcceEEEec-CCCEEEEe-cCCeEEEEEcCC----c-eEEee-eecCccccCeEECC-CCcEEEEECC-CcEEEEecC
Q 017317 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNG----T-WENWK-LIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEE 145 (373)
Q Consensus 76 ~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g----~-~~~~~-~~~~~p~~gl~~d~-~g~L~va~~~-~gl~~~~~~ 145 (373)
+..|+++++|+ ++.||+.+ .+++|++++.+| . .+.+. .....|. ||++|. +++||+++.. +.|.+++.+
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC-EEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 67899999997 67899666 678999999665 2 23322 2346788 999994 6789999865 457777755
Q ss_pred C--cEEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcc
Q 017317 146 G--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFAN 221 (373)
Q Consensus 146 g--~~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~ 221 (373)
| .+.+.. ..+..|++|++|| +|.||+++.. ..++|+++++++...+.+. ..+..|+
T Consensus 108 g~~~~~~~~----~~~~~P~~iavdp~~g~ly~~d~~----------------~~~~I~~~~~dG~~~~~~~~~~~~~P~ 167 (316)
T 1ijq_A 108 GVKRKTLFR----ENGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 167 (316)
T ss_dssp SSSEEEEEE----CTTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECSSCSCEE
T ss_pred CCceEEEEE----CCCCCcceEEeCCCCCEEEEEccC----------------CCCeEEEEcCCCCCeEEEEECCCCCce
Confidence 5 444433 1245789999997 6789999864 1368999998865555443 4678999
Q ss_pred eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC--CCCCCCceeECCCCCEEEEEecC
Q 017317 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 222 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
|++++++++.|||+++..++|.+++.+|.. .+.+... ....|.++++| +|++|++.+..
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~dg~~---~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~ 228 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVF-EDKVFWTDIIN 228 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEEECTTTTSSEEEEEEE-TTEEEEEETTT
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecCCCc---eEEEeecCCccCCcEEEEEE-CCEEEEEECCC
Confidence 999999988999999999999999988643 2333322 23579999997 47899998764
No 32
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.74 E-value=4.8e-16 Score=138.22 Aligned_cols=202 Identities=14% Similarity=0.112 Sum_probs=147.9
Q ss_pred cCCcceEEEec-CCCEEEEe-cCCeEEEEEcCCce-EEeee-ecCccccCeEECCC-CcEEEEECCC-cEEEEecCC--c
Q 017317 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTW-ENWKL-IGGDTLLGITTTQE-NEILVCDADK-GLLKVTEEG--V 147 (373)
Q Consensus 76 ~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g~~-~~~~~-~~~~p~~gl~~d~~-g~L~va~~~~-gl~~~~~~g--~ 147 (373)
...|+++++|+ ++.||+++ .+++|.+++.+|.. +.+.. ....|. +|++|++ ++||+++... .|.+++.+| .
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~-~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPE-GIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCcc-EEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 35689999998 68899776 57899999977643 33322 235799 9999974 6899998754 577777555 4
Q ss_pred EEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcceEEE
Q 017317 148 TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVAL 225 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~gi~~ 225 (373)
+.+.. ..+..|+++++++ +|+||+++.. ...+.|++++.++...+.+. ..+..|+|+++
T Consensus 114 ~~~~~----~~~~~P~~i~vd~~~g~lyv~~~~---------------~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~ 174 (267)
T 1npe_A 114 RVLFD----TGLVNPRGIVTDPVRGNLYWTDWN---------------RDNPKIETSHMDGTNRRILAQDNLGLPNGLTF 174 (267)
T ss_dssp EEEEC----SSCSSEEEEEEETTTTEEEEEECC---------------SSSCEEEEEETTSCCCEEEECTTCSCEEEEEE
T ss_pred EEEEE----CCCCCccEEEEeeCCCEEEEEECC---------------CCCcEEEEEecCCCCcEEEEECCCCCCcEEEE
Confidence 44432 1235789999999 5799999853 12468999998765544443 45778999999
Q ss_pred ccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhc
Q 017317 226 SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAF 305 (373)
Q Consensus 226 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~ 305 (373)
+++++.|||++...++|.+++.++. ....+.. ....|.+++.| +|++|++....
T Consensus 175 d~~~~~lyv~d~~~~~I~~~~~~g~---~~~~~~~-~~~~P~gi~~d-~~~lyva~~~~--------------------- 228 (267)
T 1npe_A 175 DAFSSQLCWVDAGTHRAECLNPAQP---GRRKVLE-GLQYPFAVTSY-GKNLYYTDWKT--------------------- 228 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTEE---EEEEEEE-CCCSEEEEEEE-TTEEEEEETTT---------------------
T ss_pred cCCCCEEEEEECCCCEEEEEecCCC---ceEEEec-CCCCceEEEEe-CCEEEEEECCC---------------------
Confidence 9998899999999999999997653 2222332 23579999998 68999998764
Q ss_pred chhhhhccCCCccEEEEEECCC-CcEEEEEeC
Q 017317 306 PKLIKLVAPLHKKAAVVNVAAN-GIVIRKFED 336 (373)
Q Consensus 306 ~~~~~~~~~~~~~g~v~~~~~~-g~~~~~~~~ 336 (373)
+.|.+++++ |+.+..+..
T Consensus 229 -------------~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 229 -------------NSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp -------------TEEEEEETTTTEEEEEECC
T ss_pred -------------CeEEEEeCCCCCceEEEcc
Confidence 247889975 788777753
No 33
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.74 E-value=2.8e-16 Score=160.80 Aligned_cols=228 Identities=13% Similarity=0.125 Sum_probs=162.2
Q ss_pred cceEEEecCCCEEEEecCCeEEEEEc-CCceEEeee---ecCccccCeEECCCCcEEEEECCCcEEEEe-cCC-cEEEee
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKL---IGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLAS 152 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~~-~g~~~~~~~---~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l~~ 152 (373)
..+++.|++|+||+|+.+++|+++++ +++++.+.. ...... .|+.|++|+||+++. .||++++ .++ .+.+..
T Consensus 409 v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~ 486 (781)
T 3v9f_A 409 VLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVR-VFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYD 486 (781)
T ss_dssp EEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEE-EEEECTTSEEEEEET-TEEEEEESSSSSCCEEEC
T ss_pred eEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEE-EEEECCCCCEEEEEC-CceEEEeCCCCeEEeccc
Confidence 45688899999999998889999994 466665542 123455 788999999999987 7999999 555 554432
Q ss_pred cc-CCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec--CCC--CcceEEEcc
Q 017317 153 HV-NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--SLF--FANGVALSK 227 (373)
Q Consensus 153 ~~-~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--~~~--~~~gi~~~~ 227 (373)
.. .......+.+|+.|++|+||+++.. ++|+++|+++++++.+.. ++. ....+..++
T Consensus 487 ~~~~~~~~~~i~~i~~d~~g~lWigt~~------------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~ 548 (781)
T 3v9f_A 487 TSNSQLLENFVRSIAQDSEGRFWIGTFG------------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSS 548 (781)
T ss_dssp TTTSSCSCSCEEEEEECTTCCEEEEESS------------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECT
T ss_pred CcccccccceeEEEEEcCCCCEEEEEcC------------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECC
Confidence 21 1122356788999999999999753 579999998887776543 222 234677788
Q ss_pred CCCEEEEEeCCCCeE-EEEEecCCCCcceeEEecCCCCCC----CceeECCCCCEEEEEecCCCchhhhccCChHHHHHH
Q 017317 228 DEDYLVVCETFKFRC-LKYWLKGESKEQTEIFVENLPGGP----DNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLL 302 (373)
Q Consensus 228 dg~~l~v~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~g~p----~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~ 302 (373)
+|+ +|++.. .++ ++|+.... .+..+.. ..++| .+++.|++|+||+++..+
T Consensus 549 ~g~-lWi~T~--~Glv~~~d~~~~---~~~~~~~-~~gl~~~~i~~i~~d~~g~lW~~t~~G------------------ 603 (781)
T 3v9f_A 549 KGQ-MWLATG--EGLVCFPSARNF---DYQVFQR-KEGLPNTHIRAISEDKNGNIWASTNTG------------------ 603 (781)
T ss_dssp TSC-EEEEET--TEEEEESCTTTC---CCEEECG-GGTCSCCCCCEEEECSSSCEEEECSSC------------------
T ss_pred CCC-EEEEEC--CCceEEECCCCC---cEEEccc-cCCCCCceEEEEEECCCCCEEEEcCCc------------------
Confidence 887 888865 577 89885443 3334431 22333 468899999999999765
Q ss_pred HhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecce--eEEEE-eCCEEEEeeCCCCeEEEeeCC
Q 017317 303 AAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFV--TSALE-FDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 303 ~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~--~~~~~-~~g~L~vgs~~~~~i~~~~l~ 371 (373)
+.+++++.+.+..|...+|...... .++.. .+|+||+|+..+ +.++++.
T Consensus 604 ------------------l~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G--l~~f~p~ 655 (781)
T 3v9f_A 604 ------------------ISCYITSKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSING--LCFFNPD 655 (781)
T ss_dssp ------------------EEEEETTTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEEETTE--EEEECSC
T ss_pred ------------------eEEEECCCCceEEecccCCccccccccCceEECCCCEEEEECCCc--eEEEChh
Confidence 7999999999999977777543322 23333 478999999865 8888764
No 34
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.74 E-value=1.4e-15 Score=142.67 Aligned_cols=228 Identities=13% Similarity=0.122 Sum_probs=165.8
Q ss_pred ceEEEecCCCEEEEecCCeEEEEEcCC-ceEEeeeecCccccCeEEC-CCCcEEEEECC-CcEEEEecCC--cEEEeecc
Q 017317 80 EDVCVDRNGVLYTATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTT-QENEILVCDAD-KGLLKVTEEG--VTVLASHV 154 (373)
Q Consensus 80 ~~ia~d~~G~l~v~~~~g~I~~~~~~g-~~~~~~~~~~~p~~gl~~d-~~g~L~va~~~-~gl~~~~~~g--~~~l~~~~ 154 (373)
.+.+.++++.|+++.. ..|.+++.++ ..+.+......|. ++++| .++.||+++.. +.|++++.+| .+.+..
T Consensus 80 ~C~~~~~~~~l~~~~~-~~I~~i~~~~~~~~~~~~~~~~~~-gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~-- 155 (386)
T 3v65_B 80 SCKALGPEPVLLFANR-IDIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS-- 155 (386)
T ss_dssp CEEECSSCCEEEEECB-SCEEEECTTSCCCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC--
T ss_pred eECCccccceeEeecC-ccceeeccCCCcEEEEecCCCccE-EEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe--
Confidence 3455556677777654 5699998655 4555555667899 99999 46789999865 4578888444 444322
Q ss_pred CCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-ecCCCCcceEEEccCCCEE
Q 017317 155 NGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVALSKDEDYL 232 (373)
Q Consensus 155 ~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~~gi~~~~dg~~l 232 (373)
.....|.+|++|+ +|+||+++.. .++|++++.++...+.+ ...+..|++++++|++..|
T Consensus 156 --~~~~~p~glavd~~~g~lY~~d~~-----------------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~l 216 (386)
T 3v65_B 156 --TGLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTI 216 (386)
T ss_dssp --SSCSCCCCEEEETTTTEEEEEETT-----------------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred --CCCCCccEEEEEeCCCeEEEEcCC-----------------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeE
Confidence 2234688999996 6799999874 46899999886654444 3567889999999988889
Q ss_pred EEEeCCC-CeEEEEEecCCCCcceeEEecCCCCCCCceeECC-CCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhh
Q 017317 233 VVCETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIK 310 (373)
Q Consensus 233 ~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 310 (373)
||++... ++|++++++|... ..+.......|+++++|+ +|+||++....
T Consensus 217 y~td~~~~~~I~r~~~dG~~~---~~~~~~~~~~PnGlavd~~~~~lY~aD~~~-------------------------- 267 (386)
T 3v65_B 217 YWTDWGNTPRIEASSMDGSGR---RIIADTHLFWPNGLTIDYAGRRMYWVDAKH-------------------------- 267 (386)
T ss_dssp EEEECSSSCEEEEEETTSCSC---EEEECSSCSCEEEEEEEGGGTEEEEEETTT--------------------------
T ss_pred EEeccCCCCEEEEEeCCCCCc---EEEEECCCCCeeeEEEeCCCCEEEEEECCC--------------------------
Confidence 9999988 8999999887422 233323334699999995 67899998654
Q ss_pred hccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeC
Q 017317 311 LVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPL 370 (373)
Q Consensus 311 ~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l 370 (373)
+.|.+++.+|+..+.+.... ...+.++...+++||+....++.|.+++.
T Consensus 268 --------~~I~~~d~dG~~~~~~~~~~---~~~P~giav~~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 268 --------HVIERANLDGSHRKAVISQG---LPHPFAITVFEDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp --------TEEEEECTTSCSCEEEECSS---CSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred --------CEEEEEeCCCCeeEEEEECC---CCCceEEEEECCEEEEeeCCCCeEEEEEC
Confidence 25788898886544443322 34567777778999999999999999973
No 35
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.74 E-value=2.4e-15 Score=133.69 Aligned_cols=219 Identities=12% Similarity=0.135 Sum_probs=155.3
Q ss_pred CEEEEecCCeEEEEEcCCceE-------EeeeecCccccCeEECC-CCcEEEEECCC-cEEEEecCC--cEEEeeccCCc
Q 017317 89 VLYTATRDGWIKRLHKNGTWE-------NWKLIGGDTLLGITTTQ-ENEILVCDADK-GLLKVTEEG--VTVLASHVNGS 157 (373)
Q Consensus 89 ~l~v~~~~g~I~~~~~~g~~~-------~~~~~~~~p~~gl~~d~-~g~L~va~~~~-gl~~~~~~g--~~~l~~~~~~~ 157 (373)
.||+++. +.|.+++.+|... .+......|. ++++|+ +++||+++... .|.+++.+| .+.+.. .
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~-gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~----~ 76 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVII-GLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIR----Q 76 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEE-EEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEEC----T
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEE-EEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEE----C
Confidence 4666654 4899998666421 1222235688 999997 56899998754 578888444 443322 2
Q ss_pred cccccceeEEcCC-CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcceEEEccCCCEEEEE
Q 017317 158 RINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDEDYLVVC 235 (373)
Q Consensus 158 ~~~~~~~l~~~~d-G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~gi~~~~dg~~l~v~ 235 (373)
.+..|++|+++++ |+||+++.. .++|++++.++...+.+. .++..|++++++++++.|||+
T Consensus 77 ~~~~p~~ia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~ 139 (267)
T 1npe_A 77 DLGSPEGIALDHLGRTIFWTDSQ-----------------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWT 139 (267)
T ss_dssp TCCCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEE
T ss_pred CCCCccEEEEEecCCeEEEEECC-----------------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEE
Confidence 2357899999985 689999864 468999998765444433 356789999999987789999
Q ss_pred eCC--CCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCC-CEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhc
Q 017317 236 ETF--KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG-SFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLV 312 (373)
Q Consensus 236 ~~~--~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG-~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 312 (373)
+.. .++|+++++++... ..+.......|.++++|++| +||++....
T Consensus 140 ~~~~~~~~I~~~~~dg~~~---~~~~~~~~~~P~gia~d~~~~~lyv~d~~~---------------------------- 188 (267)
T 1npe_A 140 DWNRDNPKIETSHMDGTNR---RILAQDNLGLPNGLTFDAFSSQLCWVDAGT---------------------------- 188 (267)
T ss_dssp ECCSSSCEEEEEETTSCCC---EEEECTTCSCEEEEEEETTTTEEEEEETTT----------------------------
T ss_pred ECCCCCcEEEEEecCCCCc---EEEEECCCCCCcEEEEcCCCCEEEEEECCC----------------------------
Confidence 986 57999999876432 22332223579999999965 799998764
Q ss_pred cCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCC
Q 017317 313 APLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 313 ~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~ 371 (373)
+.|.+++.+|.....+... ...+..+..++++||++...++.|.++++.
T Consensus 189 ------~~I~~~~~~g~~~~~~~~~----~~~P~gi~~d~~~lyva~~~~~~v~~~d~~ 237 (267)
T 1npe_A 189 ------HRAECLNPAQPGRRKVLEG----LQYPFAVTSYGKNLYYTDWKTNSVIAMDLA 237 (267)
T ss_dssp ------TEEEEEETTEEEEEEEEEC----CCSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ------CEEEEEecCCCceEEEecC----CCCceEEEEeCCEEEEEECCCCeEEEEeCC
Confidence 2478888887655544321 234566766789999999999999999876
No 36
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.74 E-value=3.8e-15 Score=136.25 Aligned_cols=212 Identities=18% Similarity=0.236 Sum_probs=141.3
Q ss_pred ccceeEeccCCcCCcceEEEecCCCEEEEec-CCeEEEEEc-CCceEEeee-------ecCccccCeEECC----CCcEE
Q 017317 65 IQSVTRLGEGILNGPEDVCVDRNGVLYTATR-DGWIKRLHK-NGTWENWKL-------IGGDTLLGITTTQ----ENEIL 131 (373)
Q Consensus 65 l~~~~~~~~g~~~~P~~ia~d~~G~l~v~~~-~g~I~~~~~-~g~~~~~~~-------~~~~p~~gl~~d~----~g~L~ 131 (373)
...++.++++ +..|++|++.++|+||++.. .|+|++++. +|+.+.+.. ..+.++ ||++++ +|.||
T Consensus 21 ~~~~~~va~g-L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gll-Gia~~Pdf~~~g~lY 98 (347)
T 3das_A 21 VKVLRTVATG-LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLL-GIALSPDYASDHMVY 98 (347)
T ss_dssp EEEEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEE-EEEECTTHHHHCEEE
T ss_pred CceeEEeecC-CCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCce-eeEeccccccCCEEE
Confidence 3467788887 89999999999999999997 899999984 455544321 234578 999997 48899
Q ss_pred EEE---CCCcEEEEe-cC-----C----cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCc
Q 017317 132 VCD---ADKGLLKVT-EE-----G----VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHG 198 (373)
Q Consensus 132 va~---~~~gl~~~~-~~-----g----~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g 198 (373)
++. ....|.++. .. . .+.+....+....+....|++++||.|||+.... +..+..++. ....|
T Consensus 99 v~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~--~~~~~~qd~--~~~~G 174 (347)
T 3das_A 99 AYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGES--GDTGLSQDR--KSLGG 174 (347)
T ss_dssp EEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCT--TCGGGTTCT--TCSTT
T ss_pred EEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCC--CCCccccCC--CCCCC
Confidence 973 235688886 32 1 3444443433445677889999999999996542 111111111 13468
Q ss_pred eEEEEeCCCC--------eEEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEe--cCCCCcceeEE--------e-
Q 017317 199 KLLKYDPSLN--------ETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWL--KGESKEQTEIF--------V- 259 (373)
Q Consensus 199 ~l~~~d~~~~--------~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~--~~~~~~~~~~~--------~- 259 (373)
.|+|+++++. ..+++..++.+|.|++++++|+ ||+++.+.+....++. .|...+..... .
T Consensus 175 ~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~ 253 (347)
T 3das_A 175 KILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHD 253 (347)
T ss_dssp CEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCC
T ss_pred EEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccC
Confidence 9999999865 3457788999999999999987 9999987643232222 33333221100 0
Q ss_pred ---cCCC--CCCCceeECCCCCEEEEEecC
Q 017317 260 ---ENLP--GGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 260 ---~~~~--g~p~~i~~d~dG~lwva~~~~ 284 (373)
.-.+ .-|.|+++. +|.+|++...+
T Consensus 254 P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~ 282 (347)
T 3das_A 254 PVAQWSTDEASPSGIAYA-EGSVWMAGLRG 282 (347)
T ss_dssp CSEEECTTTCCEEEEEEE-TTEEEEEESTT
T ss_pred CcEecCCCCCCCcceEEE-cCceeeccccC
Confidence 0001 246788885 68899998764
No 37
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.73 E-value=5.3e-16 Score=159.07 Aligned_cols=226 Identities=16% Similarity=0.224 Sum_probs=160.0
Q ss_pred cceEEEecCCC-EEEEecCCeEEEEEc-CCceEEeeee-----cCccccCeEECCCCcEEEEECCCcEEEEe-cCC-cEE
Q 017317 79 PEDVCVDRNGV-LYTATRDGWIKRLHK-NGTWENWKLI-----GGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTV 149 (373)
Q Consensus 79 P~~ia~d~~G~-l~v~~~~g~I~~~~~-~g~~~~~~~~-----~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~ 149 (373)
..+++.|++|+ ||+|+.+++|+++++ +++++.+... ..... +++.|++|+||+++. .||++++ .++ .+.
T Consensus 408 v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 408 IKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVY-AILPDGEGNLWLGTL-SALVRFNPEQRSFTT 485 (795)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEE-EEEECSSSCEEEEES-SCEEEEETTTTEEEE
T ss_pred EEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeE-EEEECCCCCEEEEec-CceeEEeCCCCeEEE
Confidence 45788899999 999999889999994 5666665421 23345 788999999999997 7999999 566 554
Q ss_pred Eeecc--CCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec-----CC--CCc
Q 017317 150 LASHV--NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-----SL--FFA 220 (373)
Q Consensus 150 l~~~~--~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-----~~--~~~ 220 (373)
+.... .+.....+.++..|++|+||+++. ++|+++|++++++ .+.. .+ ...
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------------------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i 545 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------------------EGLSVFKQEGLDI-QKASILPVSNVTKLFT 545 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------------------SCEEEEEEETTEE-EECCCSCSCGGGGSCE
T ss_pred ccccccccccCCceEEEEEECCCCCEEEEeC-------------------CceEEEeCCCCeE-EEecCCCCCCCCCCee
Confidence 43211 112234677899999999999974 4799999887766 3321 11 123
Q ss_pred ceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCc----eeECCCCCEEEEEecCCCchhhhccCCh
Q 017317 221 NGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDN----IKLAPDGSFWIAILQLSSPGLEFVHTSK 296 (373)
Q Consensus 221 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~----i~~d~dG~lwva~~~~~~~~~~~~~~~p 296 (373)
..+..+++|+ +|++... +|++|+... ..+..+. ...++|++ ++.|++|+||+++..+
T Consensus 546 ~~i~~d~~g~-lWigT~~--Gl~~~d~~~---~~~~~~~-~~~gl~~~~i~~i~~d~~g~lWi~t~~G------------ 606 (795)
T 4a2l_A 546 NCIYEASNGI-IWVGTRE--GFYCFNEKD---KQIKRYN-TTNGLPNNVVYGILEDSFGRLWLSTNRG------------ 606 (795)
T ss_dssp EEEEECTTSC-EEEEESS--CEEEEETTT---TEEEEEC-GGGTCSCSCEEEEEECTTSCEEEEETTE------------
T ss_pred EEEEECCCCC-EEEEeCC--CceeECCCC---CcEEEeC-CCCCCchhheEEEEECCCCCEEEEcCCc------------
Confidence 4677788887 8888653 799998543 2344443 23345554 7789999999999654
Q ss_pred HHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecce--eEEEE-eCCEEEEeeCCCCeEEEeeCC
Q 017317 297 ATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFV--TSALE-FDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~--~~~~~-~~g~L~vgs~~~~~i~~~~l~ 371 (373)
+.+++++.+.+..|...+|...+.. .++.. .+|+||+|+.++ +.++++.
T Consensus 607 ------------------------l~~~~~~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G--l~~~~p~ 658 (795)
T 4a2l_A 607 ------------------------ISCFNPETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGING--ITTFRPE 658 (795)
T ss_dssp ------------------------EEEEETTTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEETTE--EEEECGG
T ss_pred ------------------------eEEEcCCCCcEEEcCCcCCCccccCccCceeECCCCeEEEecCCc--eEEEcHH
Confidence 7899999888888877777544433 23343 468999999865 8887753
No 38
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.73 E-value=6.9e-16 Score=140.84 Aligned_cols=184 Identities=16% Similarity=0.123 Sum_probs=136.5
Q ss_pred cCCcceEEEec-CCCEEEEe-cCCeEEEEEcCCce---EEeeeecCccccCeEECC-CCcEEEEECCC-cEEEEecCC--
Q 017317 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTW---ENWKLIGGDTLLGITTTQ-ENEILVCDADK-GLLKVTEEG-- 146 (373)
Q Consensus 76 ~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g~~---~~~~~~~~~p~~gl~~d~-~g~L~va~~~~-gl~~~~~~g-- 146 (373)
+..|.++++|+ +|.||..+ .+++|++++.+|.. ..+......|. |+++|. .|+||+++... .|.+++.+|
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc-EEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 56688888987 78898655 77899999976642 23333456789 999995 77899998754 577777555
Q ss_pred cEEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-ecCCCCcceEE
Q 017317 147 VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVA 224 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~~gi~ 224 (373)
.+.+.. ..+..|++|++|+ +|.||+++.. ..++|+++++++...+.+ ..++..|+|++
T Consensus 113 ~~~l~~----~~~~~P~giavdp~~g~ly~td~~----------------~~~~I~r~~~dG~~~~~~~~~~l~~Pngla 172 (318)
T 3sov_A 113 RKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGLT 172 (318)
T ss_dssp CEEEEC----SSCSSEEEEEEEGGGTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred EEEEEe----CCCCCccEEEEeCCCCEEEEEecC----------------CCCEEEEEEcCCCCeEEEEECCCCCccEEE
Confidence 444432 2345789999997 5799999853 247899999986554444 45688999999
Q ss_pred EccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 225 LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
++++++.|||+++..++|.+++++|.. .+.+.......|+++++|. +++|++.+..
T Consensus 173 vd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~P~glav~~-~~lywtd~~~ 228 (318)
T 3sov_A 173 LDYEEQKLYWADAKLNFIHKSNLDGTN---RQAVVKGSLPHPFALTLFE-DILYWTDWST 228 (318)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSCCSCEEEEEEET-TEEEEEETTT
T ss_pred EeccCCEEEEEECCCCEEEEEcCCCCc---eEEEecCCCCCceEEEEeC-CEEEEEecCC
Confidence 999888899999999999999988742 2334433346899999985 4677777654
No 39
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.73 E-value=3.4e-16 Score=140.23 Aligned_cols=184 Identities=13% Similarity=0.189 Sum_probs=134.2
Q ss_pred CcCCcceEEE-ecCCCEEEEec--CCeEEEEEcCCceEEeee--ecCccccCeEECCCCcEEEEECC-CcEEEEecCC--
Q 017317 75 ILNGPEDVCV-DRNGVLYTATR--DGWIKRLHKNGTWENWKL--IGGDTLLGITTTQENEILVCDAD-KGLLKVTEEG-- 146 (373)
Q Consensus 75 ~~~~P~~ia~-d~~G~l~v~~~--~g~I~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~L~va~~~-~gl~~~~~~g-- 146 (373)
.+..|.++++ +++|+||+++. +++|.+++.+|+...... ....|. +++++++|++||++.. ..|++++.+|
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 153 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQYGQFVRKFGATILQHPR-GVTVDNKGRIIVVECKVMRVIIFDQNGNV 153 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEECTTSCEEEEECTTTCSCEE-EEEECTTSCEEEEETTTTEEEEECTTSCE
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEECCCCcEEEEecCccCCCce-EEEEeCCCCEEEEECCCCEEEEEcCCCCE
Confidence 3567999999 57999998874 789999998776543221 134688 9999999999999864 4588888656
Q ss_pred cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC--CCCcceEE
Q 017317 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVA 224 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~~gi~ 224 (373)
...+... .....|++|+++++|++|+++.. .++|+++|+++.....+... +..|.+++
T Consensus 154 ~~~~~~~---~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~ 213 (286)
T 1q7f_A 154 LHKFGCS---KHLEFPNGVVVNDKQEIFISDNR-----------------AHCVKVFNYEGQYLRQIGGEGITNYPIGVG 213 (286)
T ss_dssp EEEEECT---TTCSSEEEEEECSSSEEEEEEGG-----------------GTEEEEEETTCCEEEEESCTTTSCSEEEEE
T ss_pred EEEeCCC---CccCCcEEEEECCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEEccCCccCCCcEEE
Confidence 3333211 23356899999999999999853 46899999876554444322 46799999
Q ss_pred EccCCCEEEEEeCCCC-eEEEEEecCCCCcceeEEecC-CCCCCCceeECCCCCEEEEEec
Q 017317 225 LSKDEDYLVVCETFKF-RCLKYWLKGESKEQTEIFVEN-LPGGPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~-~i~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d~dG~lwva~~~ 283 (373)
++++|+ +|+++..++ +|.+|+.++.. ...+... ....|.+++++++|++|++...
T Consensus 214 ~d~~G~-l~v~~~~~~~~i~~~~~~g~~---~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~ 270 (286)
T 1q7f_A 214 INSNGE-ILIADNHNNFNLTIFTQDGQL---ISALESKVKHAQCFDVALMDDGSVVLASKD 270 (286)
T ss_dssp ECTTCC-EEEEECSSSCEEEEECTTSCE---EEEEEESSCCSCEEEEEEETTTEEEEEETT
T ss_pred ECCCCC-EEEEeCCCCEEEEEECCCCCE---EEEEcccCCCCcceeEEECCCCcEEEECCC
Confidence 999997 999998876 99999865432 2222222 1234778999999999999643
No 40
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.71 E-value=1e-14 Score=133.14 Aligned_cols=221 Identities=14% Similarity=0.151 Sum_probs=156.4
Q ss_pred EEEEecCCeEEEEEcCC-ceEEeeeecCccccCeEECC-CCcEEEEECC-CcEEEEe-cC----C-cEEEeeccCCcccc
Q 017317 90 LYTATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVT-EE----G-VTVLASHVNGSRIN 160 (373)
Q Consensus 90 l~v~~~~g~I~~~~~~g-~~~~~~~~~~~p~~gl~~d~-~g~L~va~~~-~gl~~~~-~~----g-~~~l~~~~~~~~~~ 160 (373)
|++++. ..|.+++.++ +.+.+......|. ++++|+ +++||+++.. +.|++++ .. . .+.+.. ..+.
T Consensus 4 ll~~~~-~~I~~i~~~~~~~~~~~~~~~~p~-g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~----~~~~ 77 (316)
T 1ijq_A 4 LFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----RDIQ 77 (316)
T ss_dssp EEEECB-SSEEEEETTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC----SSCS
T ss_pred EEEECC-CeEEEEECCCcceEehhcCCCceE-EEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEe----CCCC
Confidence 455554 4588888544 4444444567899 999996 5689999875 4588888 33 2 232221 2345
Q ss_pred ccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcceEEEccCCCEEEEEeCC
Q 017317 161 LADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDEDYLVVCETF 238 (373)
Q Consensus 161 ~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~gi~~~~dg~~l~v~~~~ 238 (373)
.|.+|++|+ +|+||+++.. .++|.+++.++...+.+. ..+..|++++++|++..|||++..
T Consensus 78 ~p~glavd~~~~~ly~~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~ 140 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWG 140 (316)
T ss_dssp CCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECS
T ss_pred CcCEEEEeecCCeEEEEECC-----------------CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccC
Confidence 688999996 6799999864 478999999866555544 467889999999988889999987
Q ss_pred C-CeEEEEEecCCCCcceeEEecCCCCCCCceeECC-CCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCC
Q 017317 239 K-FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLH 316 (373)
Q Consensus 239 ~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 316 (373)
. ++|++++++|.. ...+.......|+++++|+ +++||++....
T Consensus 141 ~~~~I~~~~~dG~~---~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~-------------------------------- 185 (316)
T 1ijq_A 141 TPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKL-------------------------------- 185 (316)
T ss_dssp SSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETTT--------------------------------
T ss_pred CCCeEEEEcCCCCC---eEEEEECCCCCceEEEEeccCCEEEEEECCC--------------------------------
Confidence 5 899999987743 2233322335799999996 56899998654
Q ss_pred ccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCC
Q 017317 317 KKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 317 ~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~ 371 (373)
+.|.+++.+|+..+.+....+. ...+.++...+++||+....++.|.+++..
T Consensus 186 --~~I~~~d~dg~~~~~~~~~~~~-~~~P~giav~~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 186 --HSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp --TEEEEEETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred --CeEEEEecCCCceEEEeecCCc-cCCcEEEEEECCEEEEEECCCCeEEEEeCC
Confidence 2478888888655554322111 345677777789999999999999999863
No 41
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.71 E-value=4.2e-16 Score=143.03 Aligned_cols=192 Identities=10% Similarity=0.137 Sum_probs=132.6
Q ss_pred ccCCcCCcceEEEecCCCEEEEe-cCCeEEEEEcCCce---EEee---------eecCccccCeEECC-CCcEEEEEC--
Q 017317 72 GEGILNGPEDVCVDRNGVLYTAT-RDGWIKRLHKNGTW---ENWK---------LIGGDTLLGITTTQ-ENEILVCDA-- 135 (373)
Q Consensus 72 ~~g~~~~P~~ia~d~~G~l~v~~-~~g~I~~~~~~g~~---~~~~---------~~~~~p~~gl~~d~-~g~L~va~~-- 135 (373)
..+.+..|.+|++|++|+||+++ .+++|.+++.+|+. ..+. .....|. ++++++ +|+|||++.
T Consensus 86 ~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~-~ia~~~~~g~lyv~d~~~ 164 (329)
T 3fvz_A 86 GKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT-DVAVEPSTGAVFVSDGYC 164 (329)
T ss_dssp CTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE-EEEECTTTCCEEEEECSS
T ss_pred CCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc-EEEEeCCCCeEEEEeCCC
Confidence 34557789999999999999776 57899999987762 2221 1123688 999998 899999994
Q ss_pred CCcEEEEecCC--cEEEeeccC-----CccccccceeEEcCC-CcEEEEeCCccccccccccccccccCCceEEEEeCCC
Q 017317 136 DKGLLKVTEEG--VTVLASHVN-----GSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL 207 (373)
Q Consensus 136 ~~gl~~~~~~g--~~~l~~~~~-----~~~~~~~~~l~~~~d-G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 207 (373)
.+.|.+++.+| ...+..... ...+..|++|+++++ |+|||++.. +++|.++|+++
T Consensus 165 ~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-----------------~~~I~~~~~~~ 227 (329)
T 3fvz_A 165 NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-----------------NGRIQCFKTDT 227 (329)
T ss_dssp CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTT
T ss_pred CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-----------------CCEEEEEECCC
Confidence 45688888666 333322211 124567999999998 899999864 57899999986
Q ss_pred CeEEEeec---CCCCcceEEEcc------CCCEEEEEeCCCCeEEEEEecCCCCcceeEEe--cCCCCCCCceeECCCCC
Q 017317 208 NETSILLD---SLFFANGVALSK------DEDYLVVCETFKFRCLKYWLKGESKEQTEIFV--ENLPGGPDNIKLAPDGS 276 (373)
Q Consensus 208 ~~~~~~~~---~~~~~~gi~~~~------dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~g~p~~i~~d~dG~ 276 (373)
++...... ....+.+++++| +|+ +|+++....++..++....+. ...+. ......|.++++|++|+
T Consensus 228 G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 228 KEFVREIKHASFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASEDGT 304 (329)
T ss_dssp CCEEEEECCTTTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTTSE
T ss_pred CcEEEEEeccccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCCCC
Confidence 65543321 122344455555 666 777777777899998653321 12221 12234699999999999
Q ss_pred EEEEEecC
Q 017317 277 FWIAILQL 284 (373)
Q Consensus 277 lwva~~~~ 284 (373)
+||+....
T Consensus 305 lyvad~~~ 312 (329)
T 3fvz_A 305 VYIGDAHT 312 (329)
T ss_dssp EEEEESSS
T ss_pred EEEEECCC
Confidence 99998754
No 42
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.70 E-value=4.8e-15 Score=139.66 Aligned_cols=184 Identities=11% Similarity=0.091 Sum_probs=134.5
Q ss_pred cCCcceEEEec-CCCEEEEe-cCCeEEEEEcCC-----ceEE-eeeecCccccCeEECC-CCcEEEEECCC-cEEEEecC
Q 017317 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNG-----TWEN-WKLIGGDTLLGITTTQ-ENEILVCDADK-GLLKVTEE 145 (373)
Q Consensus 76 ~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g-----~~~~-~~~~~~~p~~gl~~d~-~g~L~va~~~~-gl~~~~~~ 145 (373)
+..|.+|++|+ ++.||+.+ .+++|++++.+| ..+. +......|. ||++|. .++||+++... .|.+++.+
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc-cEEEEecCCceEEEECCCCeEEEEeCC
Confidence 67899999997 78899665 678999999665 2233 333456789 999996 77899998764 46666655
Q ss_pred C--cEEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-ecCCCCcc
Q 017317 146 G--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFAN 221 (373)
Q Consensus 146 g--~~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~~ 221 (373)
| .+.+.. ..+..|++|++|| +|.||+++.. ..++|++++.++...+.+ ..++..|+
T Consensus 190 g~~~~~l~~----~~~~~P~~iavdp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~~~~~~l~~P~ 249 (400)
T 3p5b_L 190 GVKRKTLFR----ENGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 249 (400)
T ss_dssp TCSEEEEEE----CSSCCEEEEEEETTTTEEEEEECS----------------SSCCEEEEETTSCSCEEEECSSCSCEE
T ss_pred CCceEEEEe----CCCCCcceEEEecccCeEEEEeCC----------------CCCEEEEEeCCCCccEEEEECCCCceE
Confidence 5 444433 1345689999998 5799999864 236899999986655544 45678999
Q ss_pred eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC--CCCCCCceeECCCCCEEEEEecC
Q 017317 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 222 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
||+++++++.|||+++..++|.+++++|... +.+... ....|.+++++. +++|++.+..
T Consensus 250 glavd~~~~~lY~aD~~~~~I~~~d~dG~~~---~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~ 310 (400)
T 3p5b_L 250 GITLDLLSGRLYWVDSKLHSISSIDVNGGNR---KTILEDEKRLAHPFSLAVFE-DKVFWTDIIN 310 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCCC---EEEEECSSTTSSEEEEEEET-TEEEEEESSS
T ss_pred EEEEEeCCCEEEEEECCCCEEEEEeCCCCcc---EEEEeCCCCCCCCEEEEEeC-CEEEEecCCC
Confidence 9999998889999999999999999887432 233322 235788999954 5788777654
No 43
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.67 E-value=2.4e-14 Score=130.58 Aligned_cols=222 Identities=12% Similarity=0.066 Sum_probs=158.0
Q ss_pred CCCEEEEecCCeEEEEEcCCc---eEEeeeecCccccCeEECC-CCcEEEEECCC-cEEEEecCC--c-EEEeeccCCcc
Q 017317 87 NGVLYTATRDGWIKRLHKNGT---WENWKLIGGDTLLGITTTQ-ENEILVCDADK-GLLKVTEEG--V-TVLASHVNGSR 158 (373)
Q Consensus 87 ~G~l~v~~~~g~I~~~~~~g~---~~~~~~~~~~p~~gl~~d~-~g~L~va~~~~-gl~~~~~~g--~-~~l~~~~~~~~ 158 (373)
...|+++. ...|.+++.++. .+........+. ++.++. ++.||++|... .|.+++.+| . +.+.. ..
T Consensus 4 ~p~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~~-~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~----~~ 77 (318)
T 3sov_A 4 APLLLYAN-RRDLRLVDATNGKENATIVVGGLEDAA-AVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVV----SG 77 (318)
T ss_dssp CCEEEEEC-EEEEEEEETTCTTSCCEEEEEEEEEEE-EEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEE----EC
T ss_pred ccEEEEEc-cCeEEEEECCCCceEEEEEecCCCccE-EEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEc----CC
Confidence 34566655 357888986553 333333345677 888885 57899998754 577887433 2 22222 12
Q ss_pred ccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcceEEEccCCCEEEEEe
Q 017317 159 INLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDEDYLVVCE 236 (373)
Q Consensus 159 ~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~gi~~~~dg~~l~v~~ 236 (373)
+..|.+|++|+ +|+||+++.. .++|.++++++...+.+. ..+..|+|+++++++..|||++
T Consensus 78 l~~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td 140 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDSE-----------------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTD 140 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEE
T ss_pred CCCccEEEEEcCCCeEEEEECC-----------------CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEe
Confidence 34688999996 6799999864 478999999866555544 6788899999999877899999
Q ss_pred CC-CCeEEEEEecCCCCcceeEEecCCCCCCCceeECC-CCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccC
Q 017317 237 TF-KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAP 314 (373)
Q Consensus 237 ~~-~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 314 (373)
.. ..+|++++++|... ..+....-..|+++++|+ +|+||++....
T Consensus 141 ~~~~~~I~r~~~dG~~~---~~~~~~~l~~Pnglavd~~~~~lY~aD~~~------------------------------ 187 (318)
T 3sov_A 141 WGEVPKIERAGMDGSSR---FIIINSEIYWPNGLTLDYEEQKLYWADAKL------------------------------ 187 (318)
T ss_dssp CSSSCEEEEEETTSCSC---EEEECSSCSCEEEEEEETTTTEEEEEETTT------------------------------
T ss_pred cCCCCEEEEEEcCCCCe---EEEEECCCCCccEEEEeccCCEEEEEECCC------------------------------
Confidence 75 68999999887432 233322335799999997 66899998654
Q ss_pred CCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCC
Q 017317 315 LHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 315 ~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~ 371 (373)
+.|.+++.+|+..+.+.... ...+.++...+++||+....+..|.+++..
T Consensus 188 ----~~I~~~d~dG~~~~~~~~~~---~~~P~glav~~~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 188 ----NFIHKSNLDGTNRQAVVKGS---LPHPFALTLFEDILYWTDWSTHSILACNKY 237 (318)
T ss_dssp ----TEEEEEETTSCSCEEEECSC---CSCEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred ----CEEEEEcCCCCceEEEecCC---CCCceEEEEeCCEEEEEecCCCeEEEEECC
Confidence 24788888886655554312 345677777788999999999999999874
No 44
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.67 E-value=1.4e-14 Score=143.78 Aligned_cols=185 Identities=14% Similarity=0.087 Sum_probs=143.0
Q ss_pred CCcCCcceEEEec-CCCEEEEe-cCCeEEEEEcCCc-eEEeee-ecCccccCeEECC-CCcEEEEECCC-cEEEEecCC-
Q 017317 74 GILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-WENWKL-IGGDTLLGITTTQ-ENEILVCDADK-GLLKVTEEG- 146 (373)
Q Consensus 74 g~~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g~-~~~~~~-~~~~p~~gl~~d~-~g~L~va~~~~-gl~~~~~~g- 146 (373)
..+..|.+|++|+ +|.||+++ .+++|++++.+|. .+.+.. ....|. ||++|. .++||+++... .|.+++.+|
T Consensus 34 ~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~-GlAvD~~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 34 TGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE-GMAVDWLGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred CCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc-eEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence 3467899999997 78999665 6799999997774 343333 335799 999994 56899998764 466666556
Q ss_pred -cEEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEE
Q 017317 147 -VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVA 224 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~ 224 (373)
.+.+.. ..+..|++|++|| +|.||++|.+ ..++|+++++++...+.+...+..|+|++
T Consensus 113 ~~~~l~~----~~l~~P~~iavdp~~G~lY~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~P~Gla 172 (628)
T 4a0p_A 113 HRQVLVW----KDLDSPRALALDPAEGFMYWTEWG----------------GKPKIDRAAMDGSERTTLVPNVGRANGLT 172 (628)
T ss_dssp TCEEEEC----SSCCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSCSSEEEEE
T ss_pred cEEEEEe----CCCCCcccEEEccCCCeEEEeCCC----------------CCCEEEEEeCCCCceEEEECCCCCcceEE
Confidence 455542 2345789999997 6899999864 24799999999877777778899999999
Q ss_pred EccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 225 LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
++++++.|||++...++|.+++++|... +.+... ...|.+++++. +++|++.+..
T Consensus 173 lD~~~~~LY~aD~~~~~I~~~d~dG~~~---~v~~~~-l~~P~glav~~-~~ly~tD~~~ 227 (628)
T 4a0p_A 173 IDYAKRRLYWTDLDTNLIESSNMLGLNR---EVIADD-LPHPFGLTQYQ-DYIYWTDWSR 227 (628)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSC---EEEEEC-CSCEEEEEEET-TEEEEEETTT
T ss_pred EccccCEEEEEECCCCEEEEEcCCCCce---EEeecc-CCCceEEEEEC-CEEEEecCCC
Confidence 9999889999999999999999987432 334333 34799999986 7899998754
No 45
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.67 E-value=4.2e-14 Score=133.19 Aligned_cols=223 Identities=13% Similarity=0.129 Sum_probs=159.6
Q ss_pred CCCEEEEecCCeEEEEEcCC-ceEEeeeecCccccCeEECC-CCcEEEEECCC-cEEEEecCC------cEEEeeccCCc
Q 017317 87 NGVLYTATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTTQ-ENEILVCDADK-GLLKVTEEG------VTVLASHVNGS 157 (373)
Q Consensus 87 ~G~l~v~~~~g~I~~~~~~g-~~~~~~~~~~~p~~gl~~d~-~g~L~va~~~~-gl~~~~~~g------~~~l~~~~~~~ 157 (373)
...|+++. ...|.+++.++ ..+.+......+. +|++|. ++.||++|... .|++++.+| .+.+.. .
T Consensus 83 ~~~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~-~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~----~ 156 (400)
T 3p5b_L 83 IAYLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS----R 156 (400)
T ss_dssp SCEEEEEE-TTEEEEECTTSCSCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEEC----S
T ss_pred cceeEEec-cceeEEEccCCcceeEeccccCcce-EEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEe----C
Confidence 34555554 46799998554 3555555567889 999995 67899998754 577777332 222222 2
Q ss_pred cccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcceEEEccCCCEEEEE
Q 017317 158 RINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDEDYLVVC 235 (373)
Q Consensus 158 ~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~gi~~~~dg~~l~v~ 235 (373)
....|.+|++|. .++||++|.. .++|.+++.++...+.+. ..+..|++|+++|.+..|||+
T Consensus 157 ~~~~p~glavD~~~~~lY~~d~~-----------------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 157 DIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWT 219 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETT-----------------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEE
T ss_pred CCCCcccEEEEecCCceEEEECC-----------------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEE
Confidence 345788999997 6899999864 478999999877655554 477889999999988889999
Q ss_pred eCCC-CeEEEEEecCCCCcceeEEecCCCCCCCceeECC-CCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhcc
Q 017317 236 ETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVA 313 (373)
Q Consensus 236 ~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 313 (373)
+.+. .+|++++++|... ..+.......|.+|++|+ +++||++....
T Consensus 220 d~~~~~~I~~~~~dG~~~---~~~~~~~l~~P~glavd~~~~~lY~aD~~~----------------------------- 267 (400)
T 3p5b_L 220 DWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLDLLSGRLYWVDSKL----------------------------- 267 (400)
T ss_dssp ECSSSCCEEEEETTSCSC---EEEECSSCSCEEEEEEETTTTEEEEEETTT-----------------------------
T ss_pred eCCCCCEEEEEeCCCCcc---EEEEECCCCceEEEEEEeCCCEEEEEECCC-----------------------------
Confidence 9764 7999999887432 223323335799999995 56899998653
Q ss_pred CCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeC
Q 017317 314 PLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPL 370 (373)
Q Consensus 314 ~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l 370 (373)
..|.+++.+|+..+.+....+. ...+.++...+++||+....++.|.+++.
T Consensus 268 -----~~I~~~d~dG~~~~~~~~~~~~-l~~P~gl~v~~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 268 -----HSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp -----TEEEEEETTSCCCEEEEECSST-TSSEEEEEEETTEEEEEESSSCSEEEEES
T ss_pred -----CEEEEEeCCCCccEEEEeCCCC-CCCCEEEEEeCCEEEEecCCCCeEEEEEc
Confidence 2478888888765555332222 35567777788999999999999999973
No 46
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.67 E-value=1.7e-13 Score=125.82 Aligned_cols=236 Identities=15% Similarity=0.121 Sum_probs=159.3
Q ss_pred CCcceEEEecCC-CEEEEec-------CCeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEECC-CcEEEEe-c
Q 017317 77 NGPEDVCVDRNG-VLYTATR-------DGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT-E 144 (373)
Q Consensus 77 ~~P~~ia~d~~G-~l~v~~~-------~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~-~gl~~~~-~ 144 (373)
.+|..++++++| .+|+++. ++.|..++ .+++..........+. +++++++|+ +|+++.. ..+..++ .
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPF-GATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCC-SEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcc-eEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 568899999976 5777763 46799999 4566544444566788 999999997 8888764 4577788 5
Q ss_pred CC-c-EEEeeccCC----ccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec-C
Q 017317 145 EG-V-TVLASHVNG----SRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-S 216 (373)
Q Consensus 145 ~g-~-~~l~~~~~~----~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~ 216 (373)
++ . ..+...... .....+.+++++++|+ +|+++.. ..+.|+.+|..+++...... .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------------~~~~i~~~d~~~~~~~~~~~~~ 183 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG----------------KESVIWVVDGGNIKLKTAIQNT 183 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES----------------SSCEEEEEETTTTEEEEEECCC
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC----------------CCceEEEEcCCCCceEEEecCC
Confidence 66 3 333221110 0111367899999985 8888632 24689999998887765554 4
Q ss_pred CCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEec---CCCCCCCceeECCCCC-EEEEEecCCCchhhhc
Q 017317 217 LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE---NLPGGPDNIKLAPDGS-FWIAILQLSSPGLEFV 292 (373)
Q Consensus 217 ~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~g~p~~i~~d~dG~-lwva~~~~~~~~~~~~ 292 (373)
...+.++++++||+.+|+++. ++.+..++....+.. ..+.. .....+.+++++++|+ +|++....
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~-~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-------- 252 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNA-DGELITIDTADNKIL--SRKKLLDDGKEHFFINISLDTARQRAFITDSKA-------- 252 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECT-TSEEEEEETTTTEEE--EEEECCCSSSCCCEEEEEEETTTTEEEEEESSS--------
T ss_pred CCccceEEECCCCCEEEEEcC-CCeEEEEECCCCeEE--EEEEcCCCCCCcccceEEECCCCCEEEEEeCCC--------
Confidence 456899999999998998875 678999986543221 11111 1223566789999997 77776542
Q ss_pred cCChHHHHHHHhcchhhhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeEEEEe--CCEEEEeeCCCCeEEEee
Q 017317 293 HTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTSALEF--DDHLYLGSLNTNFIGKLP 369 (373)
Q Consensus 293 ~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~vgs~~~~~i~~~~ 369 (373)
+.+..+|. +++.+..+..... ..+..+ +++||+++...+.|.+++
T Consensus 253 --------------------------~~v~~~d~~~~~~~~~~~~~~~------~~~~~s~dg~~l~v~~~~~~~v~~~d 300 (353)
T 3vgz_A 253 --------------------------AEVLVVDTRNGNILAKVAAPES------LAVLFNPARNEAYVTHRQAGKVSVID 300 (353)
T ss_dssp --------------------------SEEEEEETTTCCEEEEEECSSC------CCEEEETTTTEEEEEETTTTEEEEEE
T ss_pred --------------------------CEEEEEECCCCcEEEEEEcCCC------ceEEECCCCCEEEEEECCCCeEEEEE
Confidence 24677775 5777776654331 234443 346999998888999988
Q ss_pred CCC
Q 017317 370 LKA 372 (373)
Q Consensus 370 l~~ 372 (373)
+..
T Consensus 301 ~~~ 303 (353)
T 3vgz_A 301 AKS 303 (353)
T ss_dssp TTT
T ss_pred CCC
Confidence 753
No 47
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.67 E-value=1.1e-14 Score=134.88 Aligned_cols=168 Identities=14% Similarity=0.156 Sum_probs=116.5
Q ss_pred ceeEeccCCcCCcceEEEecCCC-EEEEecCCeEEEEEcCCceEE-ee-------eecCccccCeEECC----CCcEEEE
Q 017317 67 SVTRLGEGILNGPEDVCVDRNGV-LYTATRDGWIKRLHKNGTWEN-WK-------LIGGDTLLGITTTQ----ENEILVC 133 (373)
Q Consensus 67 ~~~~~~~g~~~~P~~ia~d~~G~-l~v~~~~g~I~~~~~~g~~~~-~~-------~~~~~p~~gl~~d~----~g~L~va 133 (373)
+++.++++ +..|++|+++++|+ ||++...|+|++++.+|+... +. ...+.++ +|++++ ++.||++
T Consensus 9 ~~~~va~~-l~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 9 NVEVLQDK-LDHPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLL-DVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp EEEEEEEE-ESSEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEE-EEEECTTHHHHCEEEEE
T ss_pred EEEEEECC-CCCcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCce-eEEECCCCCCCCEEEEE
Confidence 56666665 89999999999999 999998999999997775431 21 1124568 999998 5899998
Q ss_pred ECC--------CcEEEEe-c-C-C-c---EEEeeccCC--ccccccceeEEcCCCcEEEEeCCccccccccccccccccC
Q 017317 134 DAD--------KGLLKVT-E-E-G-V---TVLASHVNG--SRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKP 196 (373)
Q Consensus 134 ~~~--------~gl~~~~-~-~-g-~---~~l~~~~~~--~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~ 196 (373)
... ..|.+++ . + + + +.+....+. ...+.+.+|++++||.|||+...... ....++. ...
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~--~~~~q~~--~~~ 162 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQ--RPTAQDL--DKL 162 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTC--GGGGGCT--TSC
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCC--CCccCCC--CCC
Confidence 542 3577776 3 2 2 2 233333221 23456789999999999999754211 1111111 234
Q ss_pred CceEEEEeCCCC-------------eEEEeecCCCCcceEEEccCCCEEEEEeCCCC
Q 017317 197 HGKLLKYDPSLN-------------ETSILLDSLFFANGVALSKDEDYLVVCETFKF 240 (373)
Q Consensus 197 ~g~l~~~d~~~~-------------~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~ 240 (373)
.|+|+|+++++. ..+.+..++.+|.|++++++...||+++.+.+
T Consensus 163 ~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~ 219 (353)
T 2g8s_A 163 QGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPR 219 (353)
T ss_dssp TTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSB
T ss_pred CeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCC
Confidence 579999999864 34567778899999999995445999998754
No 48
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.66 E-value=2.2e-14 Score=128.81 Aligned_cols=189 Identities=13% Similarity=0.134 Sum_probs=127.8
Q ss_pred cCCcceEEEec-CCCEEEEe-cCCeEEEEEcC-CceEEeeeec----C----ccccCeEE---CCCCcEEEE-EC-----
Q 017317 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKN-GTWENWKLIG----G----DTLLGITT---TQENEILVC-DA----- 135 (373)
Q Consensus 76 ~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~-g~~~~~~~~~----~----~p~~gl~~---d~~g~L~va-~~----- 135 (373)
-..||++.+|+ +|++|+++ .+++|.+++++ +..+.+.... + .+. ||.+ |++|+|||+ +.
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~s-Gl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMS-GLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEE-EEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceee-EEEEeccCCCCcEEEEEccccccc
Confidence 35699999987 89999998 78999999976 4444442111 1 357 9999 789999985 41
Q ss_pred --------CCcEEEEe-c---CC-cEEEeec--cC-------CccccccceeEEcCCCcEEEEeCCcccccccccccccc
Q 017317 136 --------DKGLLKVT-E---EG-VTVLASH--VN-------GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLE 193 (373)
Q Consensus 136 --------~~gl~~~~-~---~g-~~~l~~~--~~-------~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~ 193 (373)
...++++| . ++ ......- .. +.....+++|++|++|++||+++.
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~-------------- 156 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL-------------- 156 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE--------------
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC--------------
Confidence 35588999 6 46 3333221 11 113346899999999999999764
Q ss_pred ccCC-ceEEEEeCCCCeEEEeec------CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEe-cC--CC
Q 017317 194 AKPH-GKLLKYDPSLNETSILLD------SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFV-EN--LP 263 (373)
Q Consensus 194 ~~~~-g~l~~~d~~~~~~~~~~~------~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~--~~ 263 (373)
. +.|+++++++........ ....++||++.|||+.|++.++ .++|++|++..+.......-. .. ..
T Consensus 157 ---~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~~v~~~~~G~~~~~ 232 (334)
T 2p9w_A 157 ---GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAWPEPVKINGDFGTL 232 (334)
T ss_dssp ---SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCCCEECEESSCCCCC
T ss_pred ---CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcceeecccccCCcccc
Confidence 3 689999999665443321 1234789999999999999998 889999998732110011110 10 12
Q ss_pred CCCCce-eECCCCCE-EEEEec
Q 017317 264 GGPDNI-KLAPDGSF-WIAILQ 283 (373)
Q Consensus 264 g~p~~i-~~d~dG~l-wva~~~ 283 (373)
..|++| ....+|++ +|+...
T Consensus 233 ~~~dgilp~~~~G~vllV~~~~ 254 (334)
T 2p9w_A 233 SGTEKIVTVPVGNESVLVGARA 254 (334)
T ss_dssp TTEEEEEEEEETTEEEEEEEET
T ss_pred cCcccccccccCCEEEEEEcCC
Confidence 357885 66778987 666543
No 49
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.66 E-value=5.8e-14 Score=128.72 Aligned_cols=234 Identities=9% Similarity=0.006 Sum_probs=158.2
Q ss_pred CCcceEEEecCCCEEEEe-cCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEEE-CCCcEEEEe-cCC-cE-EE
Q 017317 77 NGPEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCD-ADKGLLKVT-EEG-VT-VL 150 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~-~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~-~~~gl~~~~-~~g-~~-~l 150 (373)
..|++++++ ++++|++. .++.|.++| .+++..........|. +++++++|+|||++ ....|..+| .++ +. .+
T Consensus 44 ~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~-~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i 121 (328)
T 3dsm_A 44 DVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPR-YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI 121 (328)
T ss_dssp SCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEE-EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE
T ss_pred ccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCc-EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE
Confidence 347889987 68999776 468899999 4566533223457789 99998889999998 556789999 566 33 23
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCC
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDED 230 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~ 230 (373)
...........|.+|++ .++++|+++.+ ..+.|.++|+++++..........|+++++++||+
T Consensus 122 ~~g~~~~~~~~p~~i~~-~~~~lyv~~~~----------------~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~ 184 (328)
T 3dsm_A 122 ECPDMDMESGSTEQMVQ-YGKYVYVNCWS----------------YQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNK 184 (328)
T ss_dssp ECTTCCTTTCBCCCEEE-ETTEEEEEECT----------------TCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSE
T ss_pred EcCCccccCCCcceEEE-ECCEEEEEcCC----------------CCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCC
Confidence 21111112236788888 57899999742 13689999999888765555556799999999997
Q ss_pred EEEEEeCCC----------CeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEecCCCchhhhccCChHHH
Q 017317 231 YLVVCETFK----------FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQLSSPGLEFVHTSKATK 299 (373)
Q Consensus 231 ~l~v~~~~~----------~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~~~~~~~~~~~~~~p~~~ 299 (373)
+|++.... +.|++++....+.. ..+.-.....|.+++++++|+ +|++.. .
T Consensus 185 -l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~--~~~~~~~g~~p~~la~~~d~~~lyv~~~-~--------------- 245 (328)
T 3dsm_A 185 -MWTITDGGYEGSPYGYEAPSLYRIDAETFTVE--KQFKFKLGDWPSEVQLNGTRDTLYWINN-D--------------- 245 (328)
T ss_dssp -EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE--EEEECCTTCCCEEEEECTTSCEEEEESS-S---------------
T ss_pred -EEEEECCCccCCccccCCceEEEEECCCCeEE--EEEecCCCCCceeEEEecCCCEEEEEcc-E---------------
Confidence 88888765 78999996543211 122111123699999999775 777653 2
Q ss_pred HHHHhcchhhhhccCCCccEEEEEECCC-CcEEEEEeCCCCceecceeEEEEe--CCEEEEee----CCCCeEEEeeCC
Q 017317 300 HLLAAFPKLIKLVAPLHKKAAVVNVAAN-GIVIRKFEDPNGKVMSFVTSALEF--DDHLYLGS----LNTNFIGKLPLK 371 (373)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~v~~~~~~-g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~vgs----~~~~~i~~~~l~ 371 (373)
+..+|.+ ++....-..+.+ ...+..+..+ +++||+++ ..++.|.++++.
T Consensus 246 ---------------------v~~~d~~t~~~~~~~~~~~~--~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 246 ---------------------IWRMPVEADRVPVRPFLEFR--DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp ---------------------EEEEETTCSSCCSSCSBCCC--SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ---------------------EEEEECCCCceeeeeeecCC--CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 5677754 343210000111 2356777664 57999999 778889999876
No 50
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.66 E-value=3.7e-14 Score=143.70 Aligned_cols=228 Identities=14% Similarity=0.130 Sum_probs=161.4
Q ss_pred EEEecCCCEEEEecCCeEEEEEcCC-ceEEeeeecCccccCeEECC-CCcEEEEECCC-cEEEEecCC------cEEEee
Q 017317 82 VCVDRNGVLYTATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTTQ-ENEILVCDADK-GLLKVTEEG------VTVLAS 152 (373)
Q Consensus 82 ia~d~~G~l~v~~~~g~I~~~~~~g-~~~~~~~~~~~p~~gl~~d~-~g~L~va~~~~-gl~~~~~~g------~~~l~~ 152 (373)
.++++...|++... ..|.+++.++ ..+.+......+. +|+++. +++||+++... .|++++.+| .+.+..
T Consensus 390 ~~~~~~p~Ll~an~-~~Ir~i~l~~~~~~~l~~~~~~~~-gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~ 467 (791)
T 3m0c_C 390 KAVGSIAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVIS 467 (791)
T ss_dssp EETTSCCEEEEECB-SSEEEECTTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEEC
T ss_pred eecccccccccccc-cceeEeeccCCcceeeecCCCceE-EEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEe
Confidence 34444455666554 4578887443 4455555567788 999986 67899998764 477777332 222221
Q ss_pred ccCCccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcceEEEccCCC
Q 017317 153 HVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDED 230 (373)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~gi~~~~dg~ 230 (373)
..+..|.+|++|..+ +||++|.. .++|++++.++...+.+. ..+..|.+|++++.+.
T Consensus 468 ----~~l~~P~GLAvD~~~~~LY~tD~~-----------------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g 526 (791)
T 3m0c_C 468 ----RDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG 526 (791)
T ss_dssp ----SSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT
T ss_pred ----cCCCCcceeeeeecCCcEEEEecC-----------------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCC
Confidence 235678999999765 89999975 478999999876665554 5678899999999988
Q ss_pred EEEEEeCCC-CeEEEEEecCCCCcceeEEecCCCCCCCceeEC-CCCCEEEEEecCCCchhhhccCChHHHHHHHhcchh
Q 017317 231 YLVVCETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLA-PDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKL 308 (373)
Q Consensus 231 ~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d-~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 308 (373)
.|||++.+. .+|.+++++|.. ...+.......|.+|++| .+|+||++....
T Consensus 527 ~LYwtD~g~~~~I~~~~~dG~~---~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~------------------------ 579 (791)
T 3m0c_C 527 FMYWTDWGTPAKIKKGGLNGVD---IYSLVTENIQWPNGITLDLLSGRLYWVDSKL------------------------ 579 (791)
T ss_dssp EEEEEECSSSCEEEEEETTSCC---EEEEECSSCSCEEEEEEETTTTEEEEEETTT------------------------
T ss_pred CEEEecCCCCCeEEEEecCCCc---eEEEEeCCCCCceEEEEecCCCeEEEEeCCC------------------------
Confidence 899999876 899999988743 223333333579999999 567899998653
Q ss_pred hhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeC
Q 017317 309 IKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPL 370 (373)
Q Consensus 309 ~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l 370 (373)
..|.+++.+|+....+....+. +..+.++...+++||+.....+.|.+++.
T Consensus 580 ----------~~I~~~d~dG~~~~~v~~~~~~-l~~P~glav~~~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 580 ----------HSISSIDVNGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 630 (791)
T ss_dssp ----------TEEEEEETTSCSCEEEEECTTT-TSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ----------CcEEEEecCCCceEEEecCCCc-cCCCCEEEEeCCEEEEEECCCCEEEEEeC
Confidence 2478888888765555332222 44566777778899999999999999874
No 51
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.65 E-value=6.7e-15 Score=150.06 Aligned_cols=229 Identities=12% Similarity=0.121 Sum_probs=145.8
Q ss_pred cceEEEecCCCEEEEecCCeEEEEEcC-C---ceEEeeee-------cCccccCeEECCCCcEEEEECCCcEEEEe-cCC
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLHKN-G---TWENWKLI-------GGDTLLGITTTQENEILVCDADKGLLKVT-EEG 146 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~~~-g---~~~~~~~~-------~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g 146 (373)
-.+++.|++|+||+|+. +++++++.. + +++.+... ..... +|+.|++|+||+++. .||.+++ .++
T Consensus 326 v~~i~~D~~g~lWiGt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt~-~GL~~~~~~~~ 402 (758)
T 3ott_A 326 FYSLFRDSKGFYWFGGA-NGLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIR-HIYEDKEQQLWIATD-GSINRYDYATR 402 (758)
T ss_dssp EEEEEECTTCCEEEEET-TEEEEESCTTSSCCCCEEECTTCSSSCCSCSCEE-EEEECTTSCEEEEET-TEEEEEETTTT
T ss_pred EEEEEEcCCCCEEEeeC-CcceeecccccccceeEEeccCCcCCCCCCCceE-EEEECCCCCEEEEeC-CcHhhcCcCCC
Confidence 35688899999999995 579988733 2 23333210 12345 788899999999985 6999999 566
Q ss_pred -cEEEeecc-CC-ccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCC------CeEE---Ee-
Q 017317 147 -VTVLASHV-NG-SRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL------NETS---IL- 213 (373)
Q Consensus 147 -~~~l~~~~-~~-~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~------~~~~---~~- 213 (373)
.+.+.... .+ .....+.+|..|++|+||+++.. ++|+++|+++ +.+. .+
T Consensus 403 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 403 QFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCL------------------GGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp EEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESS------------------SCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred cEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECC------------------CceEEEccccccccCCcceecccccc
Confidence 55543211 11 12345678999999999999753 5799998653 1221 11
Q ss_pred -ecCCC--CcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEec-CCC--CCCCceeECCCCCEEEEEecCCCc
Q 017317 214 -LDSLF--FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE-NLP--GGPDNIKLAPDGSFWIAILQLSSP 287 (373)
Q Consensus 214 -~~~~~--~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~--g~p~~i~~d~dG~lwva~~~~~~~ 287 (373)
..++. ....+..+++|+ +|+......+|++|+... ..+..+.. .+. ..+..+..|++|+||+++..+
T Consensus 465 ~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d~~~---~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~G--- 537 (758)
T 3ott_A 465 VHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKINPRT---REVTKLFADELTGEKSPNYLLCDEDGLLWVGFHGG--- 537 (758)
T ss_dssp GGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEETTT---TEEEEECTTTSCGGGCEEEEEECTTSCEEEEETTE---
T ss_pred cccccccceeeeEEEcCCCC-EEEEccCCCCcEEEeCCC---CceEEecCCCcCCCcccceEEECCCCCEEEEecCc---
Confidence 11222 234577788887 888333346899998543 23333321 111 235568899999999998654
Q ss_pred hhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEE
Q 017317 288 GLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGK 367 (373)
Q Consensus 288 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~ 367 (373)
+.+++++.+.+..+. .++...+.+.++.+++|+||+++..+ |.+
T Consensus 538 ---------------------------------l~~~~~~~~~~~~~~-~~gl~~~~i~~i~~~~g~lWi~t~~G--l~~ 581 (758)
T 3ott_A 538 ---------------------------------VMRINPKDESQQSIS-FGSFSNNEILSMTCVKNSIWVSTTNG--LWI 581 (758)
T ss_dssp ---------------------------------EEEECC--CCCCBCC-CCC---CCEEEEEEETTEEEEEESSC--EEE
T ss_pred ---------------------------------eEEEecCCCceEEec-ccCCCccceEEEEECCCCEEEECCCC--eEE
Confidence 788887766555553 24554556777777788999999544 888
Q ss_pred eeCC
Q 017317 368 LPLK 371 (373)
Q Consensus 368 ~~l~ 371 (373)
+++.
T Consensus 582 ~~~~ 585 (758)
T 3ott_A 582 IDRK 585 (758)
T ss_dssp EETT
T ss_pred EcCC
Confidence 8765
No 52
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.65 E-value=3.1e-14 Score=134.62 Aligned_cols=185 Identities=17% Similarity=0.241 Sum_probs=129.0
Q ss_pred cCCcceEEEecCCC-EEEEecCC--eEEEEEcCCce--EEe----eeecCccccCeEECC-CCcEEEEECCCcEEEEe-c
Q 017317 76 LNGPEDVCVDRNGV-LYTATRDG--WIKRLHKNGTW--ENW----KLIGGDTLLGITTTQ-ENEILVCDADKGLLKVT-E 144 (373)
Q Consensus 76 ~~~P~~ia~d~~G~-l~v~~~~g--~I~~~~~~g~~--~~~----~~~~~~p~~gl~~d~-~g~L~va~~~~gl~~~~-~ 144 (373)
...|. ++++++|+ ||+++.++ .|++++.++.. ..+ ......|. ++++++ +|.||+++..+.|++++ .
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~-~iav~p~~g~lyv~d~~~~I~~~d~~ 248 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIG-AVALDETEEWLYFVDSNKNFGRFNVK 248 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCC-BCEECTTSSEEEEECTTCEEEEEETT
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcE-EEEEeCCCCeEEEEECCCcEEEEECC
Confidence 35577 99999775 67777544 89999954432 232 11346788 999998 78999988756699999 4
Q ss_pred CC-cEEEeec-cCCccccccc-eeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec-C---
Q 017317 145 EG-VTVLASH-VNGSRINLAD-DLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-S--- 216 (373)
Q Consensus 145 ~g-~~~l~~~-~~~~~~~~~~-~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~--- 216 (373)
++ ...+... ..+.....|. +|++++ +|+||+++.. +++|++++.++. ...+.. .
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----------------~~~I~~~~~~g~-~~~~~g~~~~~ 310 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----------------LSSVYKITPDGE-CEWFCGSATQK 310 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------TTEEEEECTTCC-EEEEEECTTCC
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------CCEEEEEecCCC-EEEEEeCCCCC
Confidence 55 4444221 1111112244 999999 5899999864 478999998754 443332 1
Q ss_pred -----------CCCcceEEEccCCCEEEEEeC-CCCeEEEEEecCCCCcceeEEecC--------------CCCCCCcee
Q 017317 217 -----------LFFANGVALSKDEDYLVVCET-FKFRCLKYWLKGESKEQTEIFVEN--------------LPGGPDNIK 270 (373)
Q Consensus 217 -----------~~~~~gi~~~~dg~~l~v~~~-~~~~i~~~~~~~~~~~~~~~~~~~--------------~~g~p~~i~ 270 (373)
+..|+|++++++|+ |||+++ .+++|.+++..... ...+... ....|.+++
T Consensus 311 g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~---v~~~~g~~~~~g~~~g~~~~~~~~~P~gia 386 (409)
T 3hrp_A 311 TVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGY---VSTVAGQVDVASQIDGTPLEATFNYPYDIC 386 (409)
T ss_dssp SCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTE---EEEEEECTTCBSCCCBSTTTCCBSSEEEEE
T ss_pred CcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCE---EEEEeCCCCCCCcCCCChhceEeCCceEEE
Confidence 56799999999998 999999 99999999953322 2222211 023699999
Q ss_pred ECCCCCEEEEEecC
Q 017317 271 LAPDGSFWIAILQL 284 (373)
Q Consensus 271 ~d~dG~lwva~~~~ 284 (373)
+|++|+|||+....
T Consensus 387 vd~~g~lyVad~~n 400 (409)
T 3hrp_A 387 YDGEGGYWIAEAWG 400 (409)
T ss_dssp ECSSSEEEEEESTT
T ss_pred EcCCCCEEEEECCC
Confidence 99999999998764
No 53
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.64 E-value=2.4e-13 Score=123.86 Aligned_cols=217 Identities=15% Similarity=0.171 Sum_probs=146.2
Q ss_pred EEEecCCCEEEEecCCeEEEEEcCCceEEeeeec-CccccCeEECCCCcEEEEECCCcEEEEecCC-cEEEeeccCCccc
Q 017317 82 VCVDRNGVLYTATRDGWIKRLHKNGTWENWKLIG-GDTLLGITTTQENEILVCDADKGLLKVTEEG-VTVLASHVNGSRI 159 (373)
Q Consensus 82 ia~d~~G~l~v~~~~g~I~~~~~~g~~~~~~~~~-~~p~~gl~~d~~g~L~va~~~~gl~~~~~~g-~~~l~~~~~~~~~ 159 (373)
.++. +|.||+++.+++|++++.+|+........ .... .++.+++|++|+++...+++.++.+| ...... .. .
T Consensus 103 ~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~-~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~-~~---~ 176 (330)
T 3hxj_A 103 FTIF-EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYA-TPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFK-TN---D 176 (330)
T ss_dssp EEEE-TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCS-CCEECTTSCEEEECTTSEEEEECTTSCEEEEEE-CS---S
T ss_pred ceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceee-eeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEe-cC---C
Confidence 3444 89999999999999999666543222222 2234 78888899999998778899999447 332222 11 2
Q ss_pred cccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCC
Q 017317 160 NLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFK 239 (373)
Q Consensus 160 ~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~ 239 (373)
.....++++++|.||+++ ++|+++|.++...............++++++|. +|++.. +
T Consensus 177 ~~~~~~~~d~~g~l~v~t--------------------~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~-~ 234 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS--------------------DKVYAINPDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSL-D 234 (330)
T ss_dssp CCCSCCEECTTCCEEEES--------------------SSEEEECTTSCEEEEECCSSCCCSCCEECTTSC-EEEEET-T
T ss_pred CceeeeEEcCCCEEEEEe--------------------CEEEEECCCCcEEEEEccCCcceeceEECCCCe-EEEEcC-C
Confidence 345678899999999984 479999954333323322334466788888886 888864 5
Q ss_pred CeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccE
Q 017317 240 FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKA 319 (373)
Q Consensus 240 ~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g 319 (373)
+++++|+.++. ....+. .....+..+.+|.+|+||+++..+
T Consensus 235 ~gl~~~~~~g~---~~~~~~-~~~~~~~~~~~~~~g~l~v~t~~g----------------------------------- 275 (330)
T 3hxj_A 235 GHLYAINPDGT---EKWRFK-TGKRIESSPVIGNTDTIYFGSYDG----------------------------------- 275 (330)
T ss_dssp TEEEEECTTSC---EEEEEE-CSSCCCSCCEECTTSCEEEECTTC-----------------------------------
T ss_pred CeEEEECCCCC---EeEEee-CCCCccccceEcCCCeEEEecCCC-----------------------------------
Confidence 68999974332 222222 222345668889999999998764
Q ss_pred EEEEECCCCcEEEEEeCCCCceecceeEEEE-eCCEEEEeeCCCCeEEEeeC
Q 017317 320 AVVNVAANGIVIRKFEDPNGKVMSFVTSALE-FDDHLYLGSLNTNFIGKLPL 370 (373)
Q Consensus 320 ~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~vgs~~~~~i~~~~l 370 (373)
.++++|++|+.+..+..+. ..+..+.. .+|+||+|+..+- +...+.
T Consensus 276 gl~~~d~~g~~~~~~~~~~----~~~~~~~~d~~g~l~~gt~~G~-~~~~~~ 322 (330)
T 3hxj_A 276 HLYAINPDGTEKWNFETGS----WIIATPVIDENGTIYFGTRNGK-FYALFN 322 (330)
T ss_dssp EEEEECTTSCEEEEEECSS----CCCSCCEECTTCCEEEECTTSC-EEEEEC
T ss_pred CEEEECCCCcEEEEEEcCC----ccccceEEcCCCEEEEEcCCCe-EEEEec
Confidence 4899999999888776543 23445555 5789999998663 544443
No 54
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.64 E-value=1e-14 Score=133.34 Aligned_cols=179 Identities=15% Similarity=0.130 Sum_probs=126.2
Q ss_pred CCcceEEEec-CCCEEEEecCCeEEEEEcC-CceEEeeee-----cCccccCeEECC-CCcEEEEECC------------
Q 017317 77 NGPEDVCVDR-NGVLYTATRDGWIKRLHKN-GTWENWKLI-----GGDTLLGITTTQ-ENEILVCDAD------------ 136 (373)
Q Consensus 77 ~~P~~ia~d~-~G~l~v~~~~g~I~~~~~~-g~~~~~~~~-----~~~p~~gl~~d~-~g~L~va~~~------------ 136 (373)
..|.+|++++ +|+||+++..++|++++.+ ++.+.+... ...|. ++++++ +|+|||++..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~-~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLY-AVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEE-EEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccc-eEEEecCCCEEEEECCcccccccccceeh
Confidence 4689999997 8999999877789999965 444444321 24578 999999 9999999854
Q ss_pred ------CcEEEEe-cCC-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCC
Q 017317 137 ------KGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL 207 (373)
Q Consensus 137 ------~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 207 (373)
.++++++ .++ .+.+.. .+..+++|+++++|+ |||++.. .++|++|+.++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~-----~~~~p~gia~~~dg~~lyv~d~~-----------------~~~I~~~~~~~ 216 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLK-----ELHVPGGAEVSADSSFVLVAEFL-----------------SHQIVKYWLEG 216 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEE-----EESCCCEEEECTTSSEEEEEEGG-----------------GTEEEEEESSS
T ss_pred cccCCCceEEEEeCCCCEEEEecc-----CCccCcceEECCCCCEEEEEeCC-----------------CCeEEEEECCC
Confidence 3588888 456 554432 235789999999985 9999864 46899999774
Q ss_pred ---CeEEEeecCCCCcceEEEccCCCEEEEEeCC----------CCeEEEEEecCCCCcceeEEecCC---CCCCCceeE
Q 017317 208 ---NETSILLDSLFFANGVALSKDEDYLVVCETF----------KFRCLKYWLKGESKEQTEIFVENL---PGGPDNIKL 271 (373)
Q Consensus 208 ---~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~----------~~~i~~~~~~~~~~~~~~~~~~~~---~g~p~~i~~ 271 (373)
+..+.+.. ...|.|++++++|+ +|+++.. .++|.+|+.++.. ...+.... ...|.+++.
T Consensus 217 ~~~~~~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~G~~---~~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 217 PKKGTAEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEFGNI---LEVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp TTTTCEEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTTSCE---EEEEECCTTTTTSCCCEEEE
T ss_pred CcCCccceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCCCCE---EEEEECCCCCccccceEEEE
Confidence 23444333 22399999999998 9999865 4678999865432 22232111 234666666
Q ss_pred CCCCCEEEEEecC
Q 017317 272 APDGSFWIAILQL 284 (373)
Q Consensus 272 d~dG~lwva~~~~ 284 (373)
.+|+|||++...
T Consensus 292 -~~g~L~v~~~~~ 303 (322)
T 2fp8_A 292 -HDGLLYIGTLFH 303 (322)
T ss_dssp -ETTEEEEECSSC
T ss_pred -eCCEEEEeecCC
Confidence 578999997643
No 55
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.64 E-value=1.7e-14 Score=143.04 Aligned_cols=185 Identities=17% Similarity=0.156 Sum_probs=133.9
Q ss_pred CcCCcceEEEec-CCCEEEEe-cCCeEEEEEcCCc--eEE-eeeecCccccCeEECC-CCcEEEEECCCc-EEEEecCC-
Q 017317 75 ILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT--WEN-WKLIGGDTLLGITTTQ-ENEILVCDADKG-LLKVTEEG- 146 (373)
Q Consensus 75 ~~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g~--~~~-~~~~~~~p~~gl~~d~-~g~L~va~~~~g-l~~~~~~g- 146 (373)
.+..|.+|++++ +|.||+++ .+++|.+++.+|. .+. +......|. ||++|. .++||+++...+ |.+++.+|
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~-GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC-eEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 378899999997 88899766 6789999997775 233 333346899 999997 568999987654 55566566
Q ss_pred -cEEEeeccCCccccccceeEEcCC-CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcceE
Q 017317 147 -VTVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGV 223 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~d-G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~gi 223 (373)
.+.+.. ..+..|++|++||. |.||++|.+ ..++|++.++++...+.+. ..+..|+|+
T Consensus 117 ~~~~l~~----~~l~~P~~Iavdp~~g~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~~~~P~Gl 176 (619)
T 3s94_A 117 LRKVLFW----QELDQPRAIALDPSSGFMYWTDWG----------------EVPKIERAGMDGSSRFIIINSEIYWPNGL 176 (619)
T ss_dssp SCEEEEC----SSCSCCCCEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSSEEEE
T ss_pred CEEEEEe----CCCCCCceEEEecCCCeEEEeccC----------------CCCEEEEEECCCCceEEEEeCCCCCCcEE
Confidence 455543 23567999999985 799999864 2468999999866555444 578899999
Q ss_pred EEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 224 ALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 224 ~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
+++++++.|||++...++|.+++++|... +.+.......|.+++++.+ ++|++.+..
T Consensus 177 ald~~~~~LY~aD~~~~~I~~~~~dG~~~---~~~~~~~~~~P~gi~~~~~-~ly~td~~~ 233 (619)
T 3s94_A 177 TLDYEEQKLYWADAKLNFIHKSNLDGTNR---QAVVKGSLPHPFALTLFED-ILYWTDWST 233 (619)
T ss_dssp EEETTTTEEEEEETTTCCEEEESSSCCEE---C---------CCCEEESSS-EEEEECTTT
T ss_pred EEEccCCEEEEEeCCCCeEEEecCCCCcc---EEEEeCCCCCceEEEEeCC-EEEEecCCC
Confidence 99998888999999999999999887422 2222222357999999877 899998764
No 56
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.64 E-value=2.6e-13 Score=124.78 Aligned_cols=241 Identities=16% Similarity=0.208 Sum_probs=152.9
Q ss_pred cCCcceEEEecCCCEEEEec---CCeEEEEE-cCCceEEee---eecCccccCeEECCCCc-EEEEECCCc-EEEEe--c
Q 017317 76 LNGPEDVCVDRNGVLYTATR---DGWIKRLH-KNGTWENWK---LIGGDTLLGITTTQENE-ILVCDADKG-LLKVT--E 144 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~~---~g~I~~~~-~~g~~~~~~---~~~~~p~~gl~~d~~g~-L~va~~~~g-l~~~~--~ 144 (373)
...|..++++++|+||+.+. ++.|..++ .+|+.+.+. .....|. +++++++|+ ||++....+ +..++ .
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~-~~a~spdg~~l~~~~~~~~~v~v~~~~~ 117 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPA-YVAVDEARQLVYSANYHKGTAEVMKIAA 117 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCS-EEEEETTTTEEEEEETTTTEEEEEEECT
T ss_pred cCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCE-EEEECCCCCEEEEEeCCCCEEEEEEeCC
Confidence 47799999999999997664 57898888 455544332 2456788 999999997 888874433 55565 3
Q ss_pred CC-cEEEeec-cCCc------cccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCC-CCeEEEe--
Q 017317 145 EG-VTVLASH-VNGS------RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS-LNETSIL-- 213 (373)
Q Consensus 145 ~g-~~~l~~~-~~~~------~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~~~~~~-- 213 (373)
+| .+.+... ..+. ....+..++++|||++|+++.. .+.|+.++.+ +++....
T Consensus 118 ~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----------------~~~v~~~~~~~~g~~~~~~~ 180 (347)
T 3hfq_A 118 DGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----------------SDKVYVYNVSDAGQLSEQSV 180 (347)
T ss_dssp TSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----------------TTEEEEEEECTTSCEEEEEE
T ss_pred CCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----------------CCEEEEEEECCCCcEEEeee
Confidence 55 4443321 1111 1224678999999999888753 3567666655 4544432
Q ss_pred --ecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCC--CCcceeEEecCCC------CCCCceeECCCCC-EEEEEe
Q 017317 214 --LDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE--SKEQTEIFVENLP------GGPDNIKLAPDGS-FWIAIL 282 (373)
Q Consensus 214 --~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~------g~p~~i~~d~dG~-lwva~~ 282 (373)
......|.+++|+|||+++|+++...+.+..|+++.. ......... ..+ ..|.++++++||+ ||++..
T Consensus 181 ~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 181 LTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVK-TIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEE-SSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred EEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeee-ecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 1223467889999999999999988889998887642 111111111 111 2366699999997 677765
Q ss_pred cCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECCCCcE--EEEEeCCCCceecceeEEEEe-C-CEEEEe
Q 017317 283 QLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIV--IRKFEDPNGKVMSFVTSALEF-D-DHLYLG 358 (373)
Q Consensus 283 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~--~~~~~~~~g~~~~~~~~~~~~-~-g~L~vg 358 (373)
... ...++.++.+|+. +..+... + ..+..+..+ + ..||++
T Consensus 260 ~~~--------------------------------~v~v~~~~~~g~~~~~~~~~~~-~---~~~~~~~~spdg~~l~v~ 303 (347)
T 3hfq_A 260 GYN--------------------------------TLAVFAVTADGHLTLIQQISTE-G---DFPRDFDLDPTEAFVVVV 303 (347)
T ss_dssp TTT--------------------------------EEEEEEECGGGCEEEEEEEECS-S---SCCCEEEECTTSSEEEEE
T ss_pred CCC--------------------------------EEEEEEECCCCcEEEeEEEecC-C---CCcCeEEECCCCCEEEEE
Confidence 321 1124444445533 3333321 1 235666665 3 469999
Q ss_pred eCCCCeEEEeeCC
Q 017317 359 SLNTNFIGKLPLK 371 (373)
Q Consensus 359 s~~~~~i~~~~l~ 371 (373)
+..++.|..++++
T Consensus 304 ~~~~~~v~v~~~d 316 (347)
T 3hfq_A 304 NQNTDNATLYARD 316 (347)
T ss_dssp ETTTTEEEEEEEC
T ss_pred EcCCCcEEEEEEe
Confidence 9888888888654
No 57
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.64 E-value=9e-14 Score=137.85 Aligned_cols=184 Identities=16% Similarity=0.135 Sum_probs=139.0
Q ss_pred cCCcceEEEec-CCCEEEEe-cCCeEEEEEcCCc-eEEee-eecCccccCeEECC-CCcEEEEECCCc-EEEEecCC--c
Q 017317 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-WENWK-LIGGDTLLGITTTQ-ENEILVCDADKG-LLKVTEEG--V 147 (373)
Q Consensus 76 ~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g~-~~~~~-~~~~~p~~gl~~d~-~g~L~va~~~~g-l~~~~~~g--~ 147 (373)
+..|.+|++|+ +|.||+++ ..++|++++.+|. .+.+. .....|. ||++|. .++||+++...+ |.+.+.+| .
T Consensus 348 l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~-GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~ 426 (619)
T 3s94_A 348 IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPD-GIAVDWVARNLYWTDTGTDRIEVTRLNGTMR 426 (619)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcC-ceEEecccCcEEEEeCCCCcEEEEeCCCCeE
Confidence 67789999997 78999766 6789999997773 33333 3346899 999994 678999997655 45555556 4
Q ss_pred EEEeeccCCccccccceeEEcCC-CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-ecCCCCcceEEE
Q 017317 148 TVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVAL 225 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~d-G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~~gi~~ 225 (373)
+.+.. ..+..|++|++||. |.||++|.+ ..++|++.+.++...+.+ ...+..|+|+++
T Consensus 427 ~~l~~----~~l~~P~~iavdp~~G~ly~tD~g----------------~~~~I~r~~~dG~~~~~l~~~~l~~P~Glal 486 (619)
T 3s94_A 427 KILIS----EDLEEPRAIVLDPMVGYMYWTDWG----------------EIPKIERAALDGSDRVVLVNTSLGWPNGLAL 486 (619)
T ss_dssp EEEEC----TTCCSEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred EEEEE----CCCCCeeeEEEEcCCCcEEEecCC----------------CCCEEEEEccCCCccEEEEeCCCCCCeeeEE
Confidence 45542 24568999999985 899999965 236899999886554444 346889999999
Q ss_pred ccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 226 SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 226 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
+++++.|||+++..++|.+++++|... +.+.......|.+++++.+ +||++.+..
T Consensus 487 D~~~~~LY~aD~~~~~I~~~~~dG~~~---~~~~~~~l~~P~glav~~~-~ly~tD~~~ 541 (619)
T 3s94_A 487 DYDEGKIYWGDAKTDKIEVMNTDGTGR---RVLVEDKIPHIFGFTLLGD-YVYWTDWQR 541 (619)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCC---EEEEECCCCSSCCEEEETT-EEEEECTTS
T ss_pred cccCCEEEEEECCCCEEEEEecCCCce---EEEeccCCCCcEEEEEECC-EEEEeecCC
Confidence 998888999999999999999887532 2232233457999999755 899998764
No 58
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.63 E-value=3.8e-14 Score=144.54 Aligned_cols=224 Identities=17% Similarity=0.223 Sum_probs=146.8
Q ss_pred cceEEEecCCCEEEEecCCeEEEEEc-CCceEEeeee-------cCccccCeEECCCCcEEEEECCCcEEEEe-cC----
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLI-------GGDTLLGITTTQENEILVCDADKGLLKVT-EE---- 145 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~~-~g~~~~~~~~-------~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~---- 145 (373)
..+++.|++|+||+|+ +++|.++++ +++++.+... ..... .|+.|++|+|||++...||++++ .+
T Consensus 375 v~~i~~d~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~ 452 (758)
T 3ott_A 375 IRHIYEDKEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTY-YIFEDTAGQLWISTCLGGIFVVDKHKLMQS 452 (758)
T ss_dssp EEEEEECTTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEE-EEEECTTSEEEEEESSSCEEEEEHHHHHHC
T ss_pred eEEEEECCCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEE-EEEEcCCCCEEEEECCCceEEEcccccccc
Confidence 4678899999999999 568999994 5566655321 12245 78889999999999778999998 32
Q ss_pred --C-cE--EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-C--
Q 017317 146 --G-VT--VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-L-- 217 (373)
Q Consensus 146 --g-~~--~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~-- 217 (373)
+ .. .......+.+...+.+|..|++|+||++.+. .++|+++|+++++++.+... +
T Consensus 453 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t-----------------~~Gl~~~d~~~~~~~~~~~~~~~~ 515 (758)
T 3ott_A 453 TSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYN-----------------NKGIDKINPRTREVTKLFADELTG 515 (758)
T ss_dssp CSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETT-----------------CSSEEEEETTTTEEEEECTTTSCG
T ss_pred CCcceecccccccccccccceeeeEEEcCCCCEEEEccC-----------------CCCcEEEeCCCCceEEecCCCcCC
Confidence 1 11 1111223333445788999999999992211 25799999998887765321 1
Q ss_pred -CCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCC----CceeECCCCCEEEEEecCCCchhhhc
Q 017317 218 -FFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGP----DNIKLAPDGSFWIAILQLSSPGLEFV 292 (373)
Q Consensus 218 -~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p----~~i~~d~dG~lwva~~~~~~~~~~~~ 292 (373)
..++.+..+.+|+ +|++.. +++.+|+........ +. ..++| .++..| +|+||+++..+
T Consensus 516 ~~~~~~i~~d~~g~-lWigt~--~Gl~~~~~~~~~~~~---~~--~~gl~~~~i~~i~~~-~g~lWi~t~~G-------- 578 (758)
T 3ott_A 516 EKSPNYLLCDEDGL-LWVGFH--GGVMRINPKDESQQS---IS--FGSFSNNEILSMTCV-KNSIWVSTTNG-------- 578 (758)
T ss_dssp GGCEEEEEECTTSC-EEEEET--TEEEEECC--CCCCB---CC--CCC---CCEEEEEEE-TTEEEEEESSC--------
T ss_pred CcccceEEECCCCC-EEEEec--CceEEEecCCCceEE---ec--ccCCCccceEEEEEC-CCCEEEECCCC--------
Confidence 2345677888887 898863 589999865443322 21 12333 335555 89999999766
Q ss_pred cCChHHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEE-eCCEEEEeeCCCCeEEEeeCC
Q 017317 293 HTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALE-FDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 293 ~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~vgs~~~~~i~~~~l~ 371 (373)
+.+++++...+..+..++.. +. ..+.. .+|+||+|+.++ +.++++.
T Consensus 579 ----------------------------l~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~G~l~fG~~~G--l~~f~p~ 625 (758)
T 3ott_A 579 ----------------------------LWIIDRKTMDARQQNMTNKR-FT--SLLFDPKEDCVYLGGADG--FGISHSN 625 (758)
T ss_dssp ----------------------------EEEEETTTCCEEEC--CCCC-CS--EEEEETTTTEEEEECBSE--EEEEEC-
T ss_pred ----------------------------eEEEcCCCceeEEecCCCCc-ee--eeEEECCCCcEEEecCCc--eEEEChh
Confidence 78999887777766544432 22 23333 379999999765 8887764
No 59
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.61 E-value=2e-13 Score=122.84 Aligned_cols=178 Identities=11% Similarity=0.182 Sum_probs=127.2
Q ss_pred cCCcceEEEecCCCEEEEec-CCeEEEEEc-CCceEEeeee-----cCccccCeEECCCCcEEEEEC-------------
Q 017317 76 LNGPEDVCVDRNGVLYTATR-DGWIKRLHK-NGTWENWKLI-----GGDTLLGITTTQENEILVCDA------------- 135 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~~-~g~I~~~~~-~g~~~~~~~~-----~~~p~~gl~~d~~g~L~va~~------------- 135 (373)
...|.+++++++|++|+++. +++|.+++. +|+.+.+... ...+. +++++++|++|+++.
T Consensus 68 ~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 68 SHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPN-DVCLAPDGSLWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp CSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCC-CEEECTTSCEEEEECSHHHHCGGGSSCC
T ss_pred CCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCC-CEEECCCCCEEEECCccccccccccccc
Confidence 45689999999999998875 589999995 7877655322 24577 899999999999753
Q ss_pred -----CCcEEEEecCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCC-CC
Q 017317 136 -----DKGLLKVTEEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS-LN 208 (373)
Q Consensus 136 -----~~gl~~~~~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~ 208 (373)
..+|++++.+| .+.+.. ....++++++++||++++++.. .+.|++++.+ ++
T Consensus 147 ~~~~~~~~l~~~~~~g~~~~~~~-----~~~~~~gi~~s~dg~~lv~~~~-----------------~~~i~~~~~~~~g 204 (296)
T 3e5z_A 147 EMELPGRWVFRLAPDGTLSAPIR-----DRVKPNGLAFLPSGNLLVSDTG-----------------DNATHRYCLNARG 204 (296)
T ss_dssp CCCSSSCEEEEECTTSCEEEEEC-----CCSSEEEEEECTTSCEEEEETT-----------------TTEEEEEEECSSS
T ss_pred cccCCCcEEEEECCCCCEEEeec-----CCCCCccEEECCCCCEEEEeCC-----------------CCeEEEEEECCCC
Confidence 24788998547 554432 2346789999999987777653 4689888865 34
Q ss_pred eE----EEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeE-CCCC-CEEEEEe
Q 017317 209 ET----SILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKL-APDG-SFWIAIL 282 (373)
Q Consensus 209 ~~----~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~-d~dG-~lwva~~ 282 (373)
+. +.+......|.+++++++|+ +|++. .++|.+|+.++.. ...+. ...+ |.++++ +++| +||+++.
T Consensus 205 ~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~g~~---~~~~~-~~~~-~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 205 ETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPDGDE---LGRVL-TPQT-TSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp CEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTTSCE---EEEEE-CSSC-CCEEEEESTTSCEEEEEET
T ss_pred cCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCCCCE---EEEEE-CCCC-ceeEEEECCCCCEEEEEcC
Confidence 44 22212345688999999998 99998 6789999865432 22232 2223 888988 4676 4999986
Q ss_pred cC
Q 017317 283 QL 284 (373)
Q Consensus 283 ~~ 284 (373)
.+
T Consensus 277 ~~ 278 (296)
T 3e5z_A 277 TE 278 (296)
T ss_dssp TE
T ss_pred Ce
Confidence 54
No 60
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.60 E-value=1.9e-13 Score=135.60 Aligned_cols=185 Identities=15% Similarity=0.128 Sum_probs=137.5
Q ss_pred cCCcceEEEec-CCCEEEEe-cCCeEEEEEcCCce--EEeee------ecCccccCeEECCC-CcEEEEECCCcEEEE-e
Q 017317 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGTW--ENWKL------IGGDTLLGITTTQE-NEILVCDADKGLLKV-T 143 (373)
Q Consensus 76 ~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g~~--~~~~~------~~~~p~~gl~~d~~-g~L~va~~~~gl~~~-~ 143 (373)
+..+..|++|+ ++.||+.+ .+++|++++.+|.. +.+.. ....|. ||++|.. ++||+++...+.+.+ +
T Consensus 339 ~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~-glAvD~~~~nLY~td~~~~~I~v~~ 417 (628)
T 4a0p_A 339 LRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPY-DLSIDIYSRYIYWTCEATNVINVTR 417 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEE-EEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcc-eEEeeccCCeEEEEcCCCCEEEEEE
Confidence 67788899997 78899665 67899999977743 33322 245799 9999976 579999877655444 4
Q ss_pred cCC--cEEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCC
Q 017317 144 EEG--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFF 219 (373)
Q Consensus 144 ~~g--~~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~ 219 (373)
.+| .+.+... .+..|++|+++| +|.||++|.+. ..++|++.++++...+.+. ..+..
T Consensus 418 ~~G~~~~~l~~~----~l~~Pr~iavdp~~g~ly~tD~g~---------------~~~~I~r~~~dG~~~~~l~~~~l~~ 478 (628)
T 4a0p_A 418 LDGRSVGVVLKG----EQDRPRAVVVNPEKGYMYFTNLQE---------------RSPKIERAALDGTEREVLFFSGLSK 478 (628)
T ss_dssp TTSCEEEEEEEC----TTCCEEEEEEETTTTEEEEEEEET---------------TEEEEEEEETTSCSCEEEECSSCSC
T ss_pred CCCCeEEEEEeC----CCCceeeEEEecCCCeEEEeecCC---------------CCCeEEEEeCCCCCcEEEEeccCCC
Confidence 567 3444331 345799999998 89999998641 1137999999866555544 46889
Q ss_pred cceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 220 ANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 220 ~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
|+|++++++++.|||++...++|.+++++|.. .+.+.......|.+++++. |+||++.+..
T Consensus 479 P~gla~D~~~~~LYw~D~~~~~I~~~~~dG~~---r~~~~~~~~~~P~glav~~-~~ly~tD~~~ 539 (628)
T 4a0p_A 479 PIALALDSRLGKLFWADSDLRRIESSDLSGAN---RIVLEDSNILQPVGLTVFE-NWLYWIDKQQ 539 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEEECSSCSCEEEEEEET-TEEEEEETTT
T ss_pred ccEEEEeCCCCEEEEEeCCCCEEEEEeCCCCc---eEEEEcCCCCCcEEEEEEC-CEEEEEECCC
Confidence 99999999988899999999999999998753 2334433345799999976 7999998764
No 61
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.60 E-value=2.7e-13 Score=137.38 Aligned_cols=189 Identities=11% Similarity=0.081 Sum_probs=135.3
Q ss_pred EeccCCcCCcceEEEec-CCCEEEEe-cCCeEEEEEcCCc-----eEEee-eecCccccCeEECCCC-cEEEEECCC-cE
Q 017317 70 RLGEGILNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNGT-----WENWK-LIGGDTLLGITTTQEN-EILVCDADK-GL 139 (373)
Q Consensus 70 ~~~~g~~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g~-----~~~~~-~~~~~p~~gl~~d~~g-~L~va~~~~-gl 139 (373)
.+..+ +..|.+|++|. +++||+.+ .+++|++++.+|. .+.+. .....|. ||++|..+ +||+++... .|
T Consensus 418 ~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~-GLAvD~~~~~LY~tD~~~~~I 495 (791)
T 3m0c_C 418 SLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTV 495 (791)
T ss_dssp EEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEE
T ss_pred eeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc-eeeeeecCCcEEEEecCCCeE
Confidence 34444 67899999997 78899766 6788999986652 23333 2457899 99999655 899998764 46
Q ss_pred EEEecCC--cEEEeeccCCccccccceeEEcCC-CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-c
Q 017317 140 LKVTEEG--VTVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-D 215 (373)
Q Consensus 140 ~~~~~~g--~~~l~~~~~~~~~~~~~~l~~~~d-G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~ 215 (373)
.+++.+| .+.+.. ..+..|++|++|+. |.||++|.+ ..++|++++.++...+.+. .
T Consensus 496 ~v~~ldG~~~~~l~~----~~l~~P~gIaVDp~~g~LYwtD~g----------------~~~~I~~~~~dG~~~~~lv~~ 555 (791)
T 3m0c_C 496 SVADTKGVKRKTLFR----ENGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTE 555 (791)
T ss_dssp EEEETTSSSEEEEEE----CTTCCEEEEEEETTTTEEEEEECS----------------SSCEEEEEETTSCCEEEEECS
T ss_pred EEEeCCCCeEEEEEe----CCCCCcceEEEecCCCCEEEecCC----------------CCCeEEEEecCCCceEEEEeC
Confidence 6666556 444433 23456899999985 799999864 2368999999876655544 5
Q ss_pred CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC--CCCCCCceeECCCCCEEEEEecC
Q 017317 216 SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 216 ~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
.+..|+||+++++++.|||++...++|.+++++|.... .+... ....|.+|+++ +++||++.+..
T Consensus 556 ~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~---~v~~~~~~l~~P~glav~-~~~lYwtD~~~ 622 (791)
T 3m0c_C 556 NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK---TILEDEKRLAHPFSLAVF-EDKVFWTDIIN 622 (791)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEEECTTTTSSEEEEEEE-TTEEEEEETTT
T ss_pred CCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE---EEecCCCccCCCCEEEEe-CCEEEEEECCC
Confidence 67899999999888889999999999999998875322 22222 12356677775 45899998764
No 62
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.59 E-value=1.2e-13 Score=131.24 Aligned_cols=184 Identities=11% Similarity=0.087 Sum_probs=127.6
Q ss_pred CcCCcceEEEecCCCEEEEecC-----CeEEEEEcCCceE--EeeeecCccccCeEECC-CCcEEEEECCC-cEEEEec-
Q 017317 75 ILNGPEDVCVDRNGVLYTATRD-----GWIKRLHKNGTWE--NWKLIGGDTLLGITTTQ-ENEILVCDADK-GLLKVTE- 144 (373)
Q Consensus 75 ~~~~P~~ia~d~~G~l~v~~~~-----g~I~~~~~~g~~~--~~~~~~~~p~~gl~~d~-~g~L~va~~~~-gl~~~~~- 144 (373)
.+..|.+|++|++|+||+++.. ..++.++.++.+. ........|. ++++++ +|+|||++... .|++++.
T Consensus 180 ~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~-giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 180 NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAK-TCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBC-CCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCC-EEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 4678999999999999988753 2467776544332 1222467899 999998 89999998654 4888984
Q ss_pred CC-c-EEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCC--CCeE---EEeec-
Q 017317 145 EG-V-TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS--LNET---SILLD- 215 (373)
Q Consensus 145 ~g-~-~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~--~~~~---~~~~~- 215 (373)
+| . +.+... .. ...+..|+++++|+ |||++.. +.+|++++.+ ++.. ..+..
T Consensus 259 ~g~~~~~~~~~-~~--~~~~~~ia~dpdG~~LYvad~~-----------------~~~I~~~~~d~~~~~~~~~~~~ag~ 318 (433)
T 4hw6_A 259 TGTLTEEEVMM-DT--KGSNFHIVWHPTGDWAYIIYNG-----------------KHCIYRVDYNRETGKLAVPYIVCGQ 318 (433)
T ss_dssp TCCEEEEEEEC-SC--CSSCEEEEECTTSSEEEEEETT-----------------TTEEEEEEBCTTTCCBCCCEEEEEC
T ss_pred CCeEEEEEecc-CC--CCCcccEEEeCCCCEEEEEeCC-----------------CCEEEEEeCCCCCcccCcEEEEEec
Confidence 57 5 444321 11 12345799999997 9999864 4688887754 3322 12221
Q ss_pred --------------CCCCcceEEE---------ccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC-----------
Q 017317 216 --------------SLFFANGVAL---------SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN----------- 261 (373)
Q Consensus 216 --------------~~~~~~gi~~---------~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~----------- 261 (373)
.+..|.|+++ +.+|+ |||+++.+++|.+++.+| ....+...
T Consensus 319 ~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~~I~~~~~~G----~v~t~~G~g~~~~~G~~dG 393 (433)
T 4hw6_A 319 HSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSHTVRVLTPEG----RVTTYAGRGNSREWGYVDG 393 (433)
T ss_dssp TTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTTEEEEECTTS----EEEEEECCCTTCSSCCBCE
T ss_pred CCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCCEEEEECCCC----CEEEEEeCCCCCccccCCC
Confidence 2567899999 77775 999999999999998544 22222211
Q ss_pred ------CCCCCCceeEC-CCCCEEEEEecC
Q 017317 262 ------LPGGPDNIKLA-PDGSFWIAILQL 284 (373)
Q Consensus 262 ------~~g~p~~i~~d-~dG~lwva~~~~ 284 (373)
....|.++++| ++|+|||+....
T Consensus 394 ~~~~~~~~~~P~giavd~~~g~lyVaD~~n 423 (433)
T 4hw6_A 394 ELRSQALFNHPTSIAYDMKRKCFYIGDCDN 423 (433)
T ss_dssp ETTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred ccccccEeCCCcEEEEECCCCEEEEEeCCC
Confidence 11358899999 899999998764
No 63
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.59 E-value=1.4e-13 Score=124.49 Aligned_cols=179 Identities=15% Similarity=0.169 Sum_probs=128.9
Q ss_pred CCcceEEEecC-CCEEEEecCCeEEEEEcCCceEEe-eee-----cCccccCeEECCCCcEEEEECC-------------
Q 017317 77 NGPEDVCVDRN-GVLYTATRDGWIKRLHKNGTWENW-KLI-----GGDTLLGITTTQENEILVCDAD------------- 136 (373)
Q Consensus 77 ~~P~~ia~d~~-G~l~v~~~~g~I~~~~~~g~~~~~-~~~-----~~~p~~gl~~d~~g~L~va~~~------------- 136 (373)
..|.+++++++ |+||+++..++|++++.+|+.+.+ ... ...+. +++++++|++|+++..
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~~~~~ 149 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCN-DCAFDYEGNLWITAPAGEVAPADYTRSMQ 149 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETTSCEEECCSBCTTSCBCBCCC-EEEECTTSCEEEEECBCBCTTSCCCBTTS
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCCCCEEEEEeccCCCccccCCc-CEEECCCCCEEEEecCccccccccccccc
Confidence 56899999998 999999877799999966877655 321 13477 9999999999999764
Q ss_pred ---CcEEEEecCC-cEEEeeccCCccccccceeEEc----CCC-cEEEEeCCccccccccccccccccCCceEEEEeCC-
Q 017317 137 ---KGLLKVTEEG-VTVLASHVNGSRINLADDLIAA----TDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS- 206 (373)
Q Consensus 137 ---~gl~~~~~~g-~~~l~~~~~~~~~~~~~~l~~~----~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~- 206 (373)
.++++++.++ .+.+... ...+++++++ ++| .+|+++.. .++|+++|.+
T Consensus 150 ~~~~~l~~~~~~g~~~~~~~~-----~~~~~~i~~~~~~d~dg~~l~v~~~~-----------------~~~i~~~~~~~ 207 (314)
T 1pjx_A 150 EKFGSIYCFTTDGQMIQVDTA-----FQFPNGIAVRHMNDGRPYQLIVAETP-----------------TKKLWSYDIKG 207 (314)
T ss_dssp SSCEEEEEECTTSCEEEEEEE-----ESSEEEEEEEECTTSCEEEEEEEETT-----------------TTEEEEEEEEE
T ss_pred CCCCeEEEECCCCCEEEeccC-----CCCcceEEEecccCCCCCEEEEEECC-----------------CCeEEEEECCC
Confidence 3688888447 5444321 2356789999 999 69999753 3689999864
Q ss_pred CCeEE---Eee--cC-C-CCcceEEEccCCCEEEEEeCCCCeEEEEEec-CCCCcceeEEecCCCCCCCceeECCCCC-E
Q 017317 207 LNETS---ILL--DS-L-FFANGVALSKDEDYLVVCETFKFRCLKYWLK-GESKEQTEIFVENLPGGPDNIKLAPDGS-F 277 (373)
Q Consensus 207 ~~~~~---~~~--~~-~-~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~g~p~~i~~d~dG~-l 277 (373)
+++.. .+. .. . ..|.+++++++|+ +|+++...++|.+|+.+ +... ..+. .....|.+++++++|+ |
T Consensus 208 ~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~~---~~~~-~~~~~~~~i~~~~dg~~l 282 (314)
T 1pjx_A 208 PAKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPK---MRIR-CPFEKPSNLHFKPQTKTI 282 (314)
T ss_dssp TTEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCS---EEEE-CSSSCEEEEEECTTSSEE
T ss_pred CCccccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcEe---EEEe-CCCCCceeEEECCCCCEE
Confidence 34321 111 11 1 5689999999997 99998778899999865 3221 1222 1125688899999998 9
Q ss_pred EEEEec
Q 017317 278 WIAILQ 283 (373)
Q Consensus 278 wva~~~ 283 (373)
|+++..
T Consensus 283 ~v~~~~ 288 (314)
T 1pjx_A 283 FVTEHE 288 (314)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 999865
No 64
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.59 E-value=6.1e-13 Score=127.05 Aligned_cols=171 Identities=15% Similarity=0.145 Sum_probs=119.8
Q ss_pred ceeEeccCCcCCcceEEEecCCCEEEEecCC-eEEEEEc-CCceEEeeee---------cCccccCeEECC----CCcEE
Q 017317 67 SVTRLGEGILNGPEDVCVDRNGVLYTATRDG-WIKRLHK-NGTWENWKLI---------GGDTLLGITTTQ----ENEIL 131 (373)
Q Consensus 67 ~~~~~~~g~~~~P~~ia~d~~G~l~v~~~~g-~I~~~~~-~g~~~~~~~~---------~~~p~~gl~~d~----~g~L~ 131 (373)
+++.++++ +..|++|+++++|+|||+...| +|++++. +|+.+.+... .+.++ ||++++ ++.||
T Consensus 18 ~~~~~a~~-l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gll-gia~~Pdf~~~g~lY 95 (454)
T 1cru_A 18 DKKVILSN-LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLL-GFAFHPDFKNNPYIY 95 (454)
T ss_dssp CEEEEECC-CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEE-EEEECTTTTTSCEEE
T ss_pred EEEEEECC-CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCcee-EEEECCCcCcCCEEE
Confidence 56777776 8999999999999999999775 7999984 5765544321 23467 999998 78899
Q ss_pred EEECC-------------CcEEEEe-cC--C----cEEEeeccCCccccccceeEEcCCCcEEEEeCCcccccccccc--
Q 017317 132 VCDAD-------------KGLLKVT-EE--G----VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGL-- 189 (373)
Q Consensus 132 va~~~-------------~gl~~~~-~~--g----~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~-- 189 (373)
|+... ..|++++ .. + .+.+....+....+....|++++||.|||+.........+..+
T Consensus 96 v~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~ 175 (454)
T 1cru_A 96 ISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLP 175 (454)
T ss_dssp EEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTSC
T ss_pred EEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCccccccc
Confidence 98642 3688887 32 2 2344443343445778999999999999997542111000000
Q ss_pred -------------ccccccCCceEEEEeCCCC-----------eEEEeecCCCCcceEEEccCCCEEEEEeCCCC
Q 017317 190 -------------DLLEAKPHGKLLKYDPSLN-----------ETSILLDSLFFANGVALSKDEDYLVVCETFKF 240 (373)
Q Consensus 190 -------------~~~~~~~~g~l~~~d~~~~-----------~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~ 240 (373)
........|.|+|+++++. ..+.+..++.+|.|++|+++|+ ||+++.+.+
T Consensus 176 ~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~-L~~~d~g~~ 249 (454)
T 1cru_A 176 NQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK-LLQSEQGPN 249 (454)
T ss_dssp CCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-EEEEEECSS
T ss_pred cccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-EEEEecCCC
Confidence 0001123589999999865 4567788999999999999877 999997654
No 65
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.58 E-value=9.9e-15 Score=146.90 Aligned_cols=184 Identities=11% Similarity=0.086 Sum_probs=131.3
Q ss_pred cCCcceEEEec-CCCEEEEe-cCCeEEEEEcCC-----ceEEee-eecCccccCeEEC-CCCcEEEEECC-CcEEEEecC
Q 017317 76 LNGPEDVCVDR-NGVLYTAT-RDGWIKRLHKNG-----TWENWK-LIGGDTLLGITTT-QENEILVCDAD-KGLLKVTEE 145 (373)
Q Consensus 76 ~~~P~~ia~d~-~G~l~v~~-~~g~I~~~~~~g-----~~~~~~-~~~~~p~~gl~~d-~~g~L~va~~~-~gl~~~~~~ 145 (373)
+..|.+|++++ ++.||+.+ .+++|++++.++ ..+.+. .....|. ||++| ..++||+++.. +.|.+++.+
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~-glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC-CEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc-eEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 57899999997 78899766 568999999665 222222 2235789 99999 56789999765 457777755
Q ss_pred C--cEEEeeccCCccccccceeEEcCC-CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-ecCCCCcc
Q 017317 146 G--VTVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFAN 221 (373)
Q Consensus 146 g--~~~l~~~~~~~~~~~~~~l~~~~d-G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~~ 221 (373)
| .+.+.. ..+..|++|++|++ |.||+++.. ..++|++++.++...+.+ ...+..|+
T Consensus 484 g~~~~~l~~----~~~~~P~giavDp~~g~ly~td~~----------------~~~~I~~~~~dG~~~~~l~~~~l~~Pn 543 (699)
T 1n7d_A 484 GVKRKTLFR----EQGSKPRAIVVDPVHGFMYWTDWG----------------TPAKIKKGGLNGVDIYSLVTENIQWPN 543 (699)
T ss_dssp SCCEEEECC----CSSCCCCCEECCSSSSCCEECCCS----------------SSCCEEBCCSSSCCCCEESCSSCSSCC
T ss_pred CCceEEEEe----CCCCCcceEEEccCCCcEEEcccC----------------CCCeEEEEeCCCCCeeEEEeCCCCCcc
Confidence 5 444432 22456899999985 689999854 236899998875544433 35688999
Q ss_pred eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEec--CCCCCCCceeECCCCCEEEEEecC
Q 017317 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE--NLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 222 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
||+++++++.|||+++..++|.+++++|.. ...+.. .....|.+|++|.+ +||++.+..
T Consensus 544 Glavd~~~~~LY~aD~~~~~I~~~d~dG~~---~~~~~~~~~~~~~P~glavd~~-~lywtd~~~ 604 (699)
T 1n7d_A 544 GITLDLLSGRLYWVDSKLHSISSIDVNGGN---RKTILEDEKRLAHPFSLAVFED-KVFWTDIIN 604 (699)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECSSSSC---CEEECCCSSSCSSCCCCEEETT-EEEEECSTT
T ss_pred EEEEeccCCEEEEEecCCCeEEEEccCCCc---eEEEEecCCcCCCceEeEEECC-EEEEEeCCC
Confidence 999999988899999999999999987632 223332 12357999999876 677777653
No 66
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.56 E-value=5.5e-13 Score=121.43 Aligned_cols=218 Identities=14% Similarity=0.185 Sum_probs=141.4
Q ss_pred ceEEEecCCCEEEEecCCeEEEEEcCCceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEecCC-cEEEeeccCCcc
Q 017317 80 EDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVTEEG-VTVLASHVNGSR 158 (373)
Q Consensus 80 ~~ia~d~~G~l~v~~~~g~I~~~~~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~~~g-~~~l~~~~~~~~ 158 (373)
.+++++++|.||+++.+ |++++++|+................+. +|.||++....++++++..| ...... ..
T Consensus 63 ~~~~~~~~g~l~v~t~~--l~~~d~~g~~~~~~~~~~~~~~~~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~-~~--- 135 (330)
T 3hxj_A 63 CRPSIGKDGTIYFGSDK--VYAINPDGTEKWRFDTKKAIVSDFTIF-EDILYVTSMDGHLYAINTDGTEKWRFK-TK--- 135 (330)
T ss_dssp ECCEETTTTEECCSSCE--EEEECCCGGGGGGSCC-----CCEEEE-TTEEEEECTTSEEEEECTTSCEEEEEE-CS---
T ss_pred cceEEecCCcEEEecCc--EEEECCCCcEEEEEECCCCcccCceEE-CCEEEEEecCCEEEEEcCCCCEEEEEc-CC---
Confidence 45678889999998866 999987664321111111111144454 78999998777899999447 332222 11
Q ss_pred ccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEE-EeecCCCCcceEEEccCCCEEEEEeC
Q 017317 159 INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-ILLDSLFFANGVALSKDEDYLVVCET 237 (373)
Q Consensus 159 ~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~~~~~~~~gi~~~~dg~~l~v~~~ 237 (373)
......++++++|.+|+++.. ++|+++|++ ++.. ...........+.+++++. +|++.
T Consensus 136 ~~~~~~~~~~~~g~l~vgt~~------------------~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t- 194 (330)
T 3hxj_A 136 KAIYATPIVSEDGTIYVGSND------------------NYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS- 194 (330)
T ss_dssp SCCCSCCEECTTSCEEEECTT------------------SEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES-
T ss_pred CceeeeeEEcCCCEEEEEcCC------------------CEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe-
Confidence 123456788999999998643 789999998 5443 2322233445677888887 88886
Q ss_pred CCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCc
Q 017317 238 FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHK 317 (373)
Q Consensus 238 ~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 317 (373)
+++++++.++. ....+. ........+++|++|++|+++..+
T Consensus 195 --~~l~~~d~~g~---~~~~~~-~~~~~~~~~~~~~~g~l~v~t~~~--------------------------------- 235 (330)
T 3hxj_A 195 --DKVYAINPDGT---EKWNFY-AGYWTVTRPAISEDGTIYVTSLDG--------------------------------- 235 (330)
T ss_dssp --SSEEEECTTSC---EEEEEC-CSSCCCSCCEECTTSCEEEEETTT---------------------------------
T ss_pred --CEEEEECCCCc---EEEEEc-cCCcceeceEECCCCeEEEEcCCC---------------------------------
Confidence 67999983332 111111 112346778899999999998754
Q ss_pred cEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeEEEeeCC
Q 017317 318 KAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 318 ~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~ 371 (373)
.+++++++|+.+..+....+. ...+..+ +++||+++.. ..|.+++..
T Consensus 236 --gl~~~~~~g~~~~~~~~~~~~----~~~~~~~~~g~l~v~t~~-ggl~~~d~~ 283 (330)
T 3hxj_A 236 --HLYAINPDGTEKWRFKTGKRI----ESSPVIGNTDTIYFGSYD-GHLYAINPD 283 (330)
T ss_dssp --EEEEECTTSCEEEEEECSSCC----CSCCEECTTSCEEEECTT-CEEEEECTT
T ss_pred --eEEEECCCCCEeEEeeCCCCc----cccceEcCCCeEEEecCC-CCEEEECCC
Confidence 478899999998877654332 2334444 7899999974 368888753
No 67
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.56 E-value=3.2e-13 Score=128.39 Aligned_cols=183 Identities=13% Similarity=0.152 Sum_probs=125.9
Q ss_pred cCCcceEEEecCCC-EEEEecC-----CeEEEEEcCCceE--EeeeecCccccCeEECC-CCcEEEEECC-CcEEEEecC
Q 017317 76 LNGPEDVCVDRNGV-LYTATRD-----GWIKRLHKNGTWE--NWKLIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEE 145 (373)
Q Consensus 76 ~~~P~~ia~d~~G~-l~v~~~~-----g~I~~~~~~g~~~--~~~~~~~~p~~gl~~d~-~g~L~va~~~-~gl~~~~~~ 145 (373)
+..|.+|++|++|+ ||+++.. ..++.++.+|.+. ........|. ++++++ +|.||+++.. +.|++++.+
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~-giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCN-GAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCC-CEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCce-EEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 67899999999888 9988752 2567777766543 2222357799 999999 8899999865 458888844
Q ss_pred -C-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCC--CeE---EEeec--
Q 017317 146 -G-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL--NET---SILLD-- 215 (373)
Q Consensus 146 -g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~--~~~---~~~~~-- 215 (373)
+ ...+... . ....|++|+++++|+ ||+++.. ..+|++++.+. +++ ..+..
T Consensus 257 ~~~~~~~~~~-~--~~~~P~gia~~pdG~~lyv~d~~-----------------~~~I~~~~~d~~~~~~~~~~~~ag~~ 316 (430)
T 3tc9_A 257 TQETTPLFTI-Q--DSGWEFHIQFHPSGNYAYIVVVN-----------------QHYILRSDYDWKTKRLTTPYIVCGQQ 316 (430)
T ss_dssp TTEEEEEEEC-S--SSSCCEEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTTTEECCCEEEEECT
T ss_pred CCcEEEEEEc-C--CCCcceeEEEcCCCCEEEEEECC-----------------CCEEEEEeCCcccccccceEEEeccC
Confidence 4 4333221 1 124688999999997 9999864 46888876552 222 12221
Q ss_pred -------------CCCCcc-eEEEc--------cCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC------------
Q 017317 216 -------------SLFFAN-GVALS--------KDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN------------ 261 (373)
Q Consensus 216 -------------~~~~~~-gi~~~--------~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~------------ 261 (373)
.+..|. |++++ ++|+ |||+++.+++|.+++.+| ....+...
T Consensus 317 g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~-lyvaD~~n~~I~~i~~~G----~v~~~~g~g~~~~~G~~dG~ 391 (430)
T 3tc9_A 317 GAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD-FYFCDRENHCIRILTPQG----RVTTFAGRGSNGTSGYNDGD 391 (430)
T ss_dssp TCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE-EEEEEGGGTEEEEECTTS----EEEEEEECCTTSSSSCBCEE
T ss_pred CCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe-EEEEECCCcEEEEECCCC----cEEEEEeCCCCCCCcccCCC
Confidence 255677 88885 4454 999999999999998443 22222211
Q ss_pred -----CCCCCCceeECC-CCCEEEEEecC
Q 017317 262 -----LPGGPDNIKLAP-DGSFWIAILQL 284 (373)
Q Consensus 262 -----~~g~p~~i~~d~-dG~lwva~~~~ 284 (373)
....|.++++|+ +|+|||+....
T Consensus 392 ~~~~~~~~~P~giavd~~~g~lyVaD~~n 420 (430)
T 3tc9_A 392 LRQEARFNHPEGIVYDEERECFFIGDREN 420 (430)
T ss_dssp TTTTCBCSSEEEEEEETTTTEEEEEEGGG
T ss_pred chhhcEeCCCcEEEEECCCCEEEEEECCC
Confidence 012699999998 68999998764
No 68
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.56 E-value=3.4e-13 Score=122.14 Aligned_cols=181 Identities=11% Similarity=0.085 Sum_probs=127.2
Q ss_pred CCcceEEEecCCCEEEEec-CCeEEEEEcCCceEEeeee-----cCccccCeEECCCCcEEEEEC---------------
Q 017317 77 NGPEDVCVDRNGVLYTATR-DGWIKRLHKNGTWENWKLI-----GGDTLLGITTTQENEILVCDA--------------- 135 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~-~g~I~~~~~~g~~~~~~~~-----~~~p~~gl~~d~~g~L~va~~--------------- 135 (373)
..|.++++|++|+||+++. +++|.+++.+|+++.+... ...|. +++++++|++|+++.
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~-~i~~d~dG~l~~td~~~g~~~~~~~~~~~~ 164 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPN-DLIVARDGAIWFTDPPFGLRKPSQGCPADP 164 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCC-CEEECTTSCEEEECCSGGGSCGGGSCCCCC
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCC-CEEECCCCCEEEeCcCCCcccccccccccc
Confidence 5688999999999999875 4789999987887665432 24577 899999999999752
Q ss_pred ---CCcEEEEe-cCC-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCe
Q 017317 136 ---DKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE 209 (373)
Q Consensus 136 ---~~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 209 (373)
..+|++++ .+| .+.+. ....++++++++||+ ||+++.... ....+.|++++.+++.
T Consensus 165 ~~~~~~v~~~d~~~g~~~~~~------~~~~p~gl~~spdg~~lyv~~~~~~------------~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 165 ELAHHSVYRLPPDGSPLQRMA------DLDHPNGLAFSPDEQTLYVSQTPEQ------------GHGSVEITAFAWRDGA 226 (305)
T ss_dssp SSSCEEEEEECSSSCCCEEEE------EESSEEEEEECTTSSEEEEEECCC---------------CCCEEEEEEEETTE
T ss_pred ccCCCeEEEEcCCCCcEEEEe------cCCCCcceEEcCCCCEEEEEecCCc------------CCCCCEEEEEEecCCC
Confidence 24689999 467 66553 234688999999996 999975310 0012578888865443
Q ss_pred E---EEee-cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCC-CEEEEEecC
Q 017317 210 T---SILL-DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG-SFWIAILQL 284 (373)
Q Consensus 210 ~---~~~~-~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG-~lwva~~~~ 284 (373)
. +.+. .....|.|++++++|+ +|++. .++|++|+.++... ..+. .+..+.+++++++| +||+++..+
T Consensus 227 l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~--~~gv~~~~~~g~~~---~~~~--~~~~~~~~~f~~d~~~L~it~~~~ 298 (305)
T 3dr2_A 227 LHDRRHFASVPDGLPDGFCVDRGGW-LWSSS--GTGVCVFDSDGQLL---GHIP--TPGTASNCTFDQAQQRLFITGGPC 298 (305)
T ss_dssp EEEEEEEECCSSSCCCSEEECTTSC-EEECC--SSEEEEECTTSCEE---EEEE--CSSCCCEEEECTTSCEEEEEETTE
T ss_pred ccCCeEEEECCCCCCCeEEECCCCC-EEEec--CCcEEEECCCCCEE---EEEE--CCCceeEEEEeCCCCEEEEEcCCe
Confidence 2 1221 1245689999999998 99886 45799998655322 2222 23358899998877 599998754
No 69
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.55 E-value=8.9e-12 Score=113.41 Aligned_cols=239 Identities=9% Similarity=0.055 Sum_probs=150.9
Q ss_pred cCCcceEEEecCCC-EEEEec-CCeEEEEE-cCCce-EEeeeecCccccC-eEECCCCcEEEEECCC----cEEEEe-cC
Q 017317 76 LNGPEDVCVDRNGV-LYTATR-DGWIKRLH-KNGTW-ENWKLIGGDTLLG-ITTTQENEILVCDADK----GLLKVT-EE 145 (373)
Q Consensus 76 ~~~P~~ia~d~~G~-l~v~~~-~g~I~~~~-~~g~~-~~~~~~~~~p~~g-l~~d~~g~L~va~~~~----gl~~~~-~~ 145 (373)
...| +++++++|+ +|++.. ++.|++++ .+++. .........+. . ++++++|+.+++.... .+..++ .+
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM-ADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC-CCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc-cceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 4556 999999887 887664 78999999 45554 44444456777 6 9999999744454333 577788 55
Q ss_pred C-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCC-ceEEEEeCCCCeE---EEeecCCCC
Q 017317 146 G-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPH-GKLLKYDPSLNET---SILLDSLFF 219 (373)
Q Consensus 146 g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~-g~l~~~d~~~~~~---~~~~~~~~~ 219 (373)
+ ...... . ...+++++++|||+ +|+++... .. -.+|.++.++... .........
T Consensus 118 ~~~~~~~~--~---~~~~~~~~~spdg~~l~~~~~~~---------------~~~i~~~~~~~~g~~~~~~~~~~~~~~~ 177 (331)
T 3u4y_A 118 NKFISTIP--I---PYDAVGIAISPNGNGLILIDRSS---------------ANTVRRFKIDADGVLFDTGQEFISGGTR 177 (331)
T ss_dssp TEEEEEEE--C---CTTEEEEEECTTSSCEEEEEETT---------------TTEEEEEEECTTCCEEEEEEEEECSSSS
T ss_pred CCeEEEEE--C---CCCccceEECCCCCEEEEEecCC---------------CceEEEEEECCCCcEeecCCccccCCCC
Confidence 6 322211 1 12468999999995 88886431 11 2355555432211 122233456
Q ss_pred cceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcc-eeEEecCCCCCCCceeECCCCC-EEEEEecCCCchhhhccCChH
Q 017317 220 ANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQ-TEIFVENLPGGPDNIKLAPDGS-FWIAILQLSSPGLEFVHTSKA 297 (373)
Q Consensus 220 ~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~g~p~~i~~d~dG~-lwva~~~~~~~~~~~~~~~p~ 297 (373)
|.+++++|||+++|++....+.|..|++...+... ...+. ....|.++++++||+ +|++....
T Consensus 178 ~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~~------------- 242 (331)
T 3u4y_A 178 PFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTEST------------- 242 (331)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSSE-------------
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcCC-------------
Confidence 89999999999999999888999999986543311 22222 235788999999998 67765432
Q ss_pred HHHHHHhcchhhhhccCCCccEEEEEECCC-CcE--EEEEeCC---CCceecceeEEEEe--CCEEEEeeCCCCeEEEee
Q 017317 298 TKHLLAAFPKLIKLVAPLHKKAAVVNVAAN-GIV--IRKFEDP---NGKVMSFVTSALEF--DDHLYLGSLNTNFIGKLP 369 (373)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-g~~--~~~~~~~---~g~~~~~~~~~~~~--~g~L~vgs~~~~~i~~~~ 369 (373)
+.+..+|.+ |+. +..+... ..........+... +.+||+++..++.|..++
T Consensus 243 ---------------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 243 ---------------------VDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFT 301 (331)
T ss_dssp ---------------------EEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ---------------------CEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence 346677855 554 3333221 11111112334544 357999999888999998
Q ss_pred CCC
Q 017317 370 LKA 372 (373)
Q Consensus 370 l~~ 372 (373)
+..
T Consensus 302 ~~~ 304 (331)
T 3u4y_A 302 ISG 304 (331)
T ss_dssp TTS
T ss_pred ecC
Confidence 764
No 70
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.54 E-value=3.6e-13 Score=121.54 Aligned_cols=180 Identities=8% Similarity=0.018 Sum_probs=126.2
Q ss_pred CCcceEEEecCCCEEEEecCCeEEEEEc-CCceEEeeee-----cCccccCeEECCCCcEEEEECC------------Cc
Q 017317 77 NGPEDVCVDRNGVLYTATRDGWIKRLHK-NGTWENWKLI-----GGDTLLGITTTQENEILVCDAD------------KG 138 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~g~I~~~~~-~g~~~~~~~~-----~~~p~~gl~~d~~g~L~va~~~------------~g 138 (373)
..|.+++++++|++|++. +.+|++++. +|+++.+... ..++. ++++|++|++|+++.. .+
T Consensus 54 ~~~~~i~~~~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~~ 131 (297)
T 3g4e_A 54 APVSSVALRQSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFN-DGKVDPAGRYFAGTMAEETAPAVLERHQGA 131 (297)
T ss_dssp SCEEEEEEBTTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEE-EEEECTTSCEEEEEEECCSBTTBCCTTCEE
T ss_pred CceEEEEECCCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCC-CEEECCCCCEEEecCCcccccccccCCCcE
Confidence 468899999999999987 568999994 5666655432 23467 8999999999998631 35
Q ss_pred EEEEecCC-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeC--CCCeEE---
Q 017317 139 LLKVTEEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDP--SLNETS--- 211 (373)
Q Consensus 139 l~~~~~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~--~~~~~~--- 211 (373)
|++++.+| ...+... ...++++++++||+ +|++++. .++|++++. .++...
T Consensus 132 l~~~d~~g~~~~~~~~-----~~~pngi~~spdg~~lyv~~~~-----------------~~~i~~~~~d~~~G~~~~~~ 189 (297)
T 3g4e_A 132 LYSLFPDHHVKKYFDQ-----VDISNGLDWSLDHKIFYYIDSL-----------------SYSVDAFDYDLQTGQISNRR 189 (297)
T ss_dssp EEEECTTSCEEEEEEE-----ESBEEEEEECTTSCEEEEEEGG-----------------GTEEEEEEECTTTCCEEEEE
T ss_pred EEEEECCCCEEEEeec-----cccccceEEcCCCCEEEEecCC-----------------CCcEEEEeccCCCCcccCcE
Confidence 88888656 5444322 34688999999995 8999864 367888864 455432
Q ss_pred Eee---cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeEC-CCC-CEEEEEecC
Q 017317 212 ILL---DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLA-PDG-SFWIAILQL 284 (373)
Q Consensus 212 ~~~---~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d-~dG-~lwva~~~~ 284 (373)
.+. .....|.|++++++|+ +|++....++|.+|+.+..+ ...........|.+++++ +++ .|||++...
T Consensus 190 ~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~---~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 190 SVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGK---RLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCC---EEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCce---EEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 222 1235689999999997 99999888899999865222 211221112457889996 666 599998753
No 71
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.53 E-value=1.8e-11 Score=112.05 Aligned_cols=218 Identities=12% Similarity=0.164 Sum_probs=146.3
Q ss_pred CCcceEEEecCCC-EEEEe-cCCeEEEEE-cCCceEEeeeec--C--------ccccCeEECCCCc-EEEEEC--CCcEE
Q 017317 77 NGPEDVCVDRNGV-LYTAT-RDGWIKRLH-KNGTWENWKLIG--G--------DTLLGITTTQENE-ILVCDA--DKGLL 140 (373)
Q Consensus 77 ~~P~~ia~d~~G~-l~v~~-~~g~I~~~~-~~g~~~~~~~~~--~--------~p~~gl~~d~~g~-L~va~~--~~gl~ 140 (373)
..|.+++++++|. +|++. .++.|..++ .+++........ . .|. +++++++|+ +|+++. ...|+
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR-ELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE-EEEEETTTTEEEEEEESSSCEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc-eEEECCCCCEEEEEecCCCceEE
Confidence 4589999999887 88766 468999999 456543222211 1 267 899999986 888863 34588
Q ss_pred EEe-cCC-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec--
Q 017317 141 KVT-EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-- 215 (373)
Q Consensus 141 ~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-- 215 (373)
.+| .++ ...... .. ...+.+++++++|+ +|+++. .+.|+.+|..+++......
T Consensus 168 ~~d~~~~~~~~~~~-~~---~~~~~~~~~s~dg~~l~~~~~------------------~~~i~~~d~~~~~~~~~~~~~ 225 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQ-NT---GKMSTGLALDSEGKRLYTTNA------------------DGELITIDTADNKILSRKKLL 225 (353)
T ss_dssp EEETTTTEEEEEEC-CC---CTTCCCCEEETTTTEEEEECT------------------TSEEEEEETTTTEEEEEEECC
T ss_pred EEcCCCCceEEEec-CC---CCccceEEECCCCCEEEEEcC------------------CCeEEEEECCCCeEEEEEEcC
Confidence 888 556 322211 01 12477899999985 777753 3789999998887654322
Q ss_pred ---CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEecCCCchhhh
Q 017317 216 ---SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQLSSPGLEF 291 (373)
Q Consensus 216 ---~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~~~~~~~~~~ 291 (373)
....+.++++++|++.+|+++...+.|+.|+....+. ...+. . +.+.+++++++|+ +|++....
T Consensus 226 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~--~-~~~~~~~~s~dg~~l~v~~~~~------- 293 (353)
T 3vgz_A 226 DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI--LAKVA--A-PESLAVLFNPARNEAYVTHRQA------- 293 (353)
T ss_dssp CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE--EEEEE--C-SSCCCEEEETTTTEEEEEETTT-------
T ss_pred CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE--EEEEE--c-CCCceEEECCCCCEEEEEECCC-------
Confidence 1334678999999999999998889999999754322 11221 1 2367899999997 78887543
Q ss_pred ccCChHHHHHHHhcchhhhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeEEEEe-C-CEEEEeeCC
Q 017317 292 VHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTSALEF-D-DHLYLGSLN 361 (373)
Q Consensus 292 ~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~vgs~~ 361 (373)
+.+..+|. +++.+..+.... .+..+... + +.||+++..
T Consensus 294 ---------------------------~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 294 ---------------------------GKVSVIDAKSYKVVKTFDTPT-----HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ---------------------------TEEEEEETTTTEEEEEEECCS-----EEEEEEECTTSCEEEEEEEC
T ss_pred ---------------------------CeEEEEECCCCeEEEEEecCC-----CCCeEEEcCCCCEEEEEEcc
Confidence 24677775 577776665432 35666665 3 469998865
No 72
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.53 E-value=2.4e-13 Score=136.84 Aligned_cols=226 Identities=13% Similarity=0.120 Sum_probs=155.6
Q ss_pred ecCCCEEEEecCCeEEEEEcCC-ceEEeeeecCccccCeEECC-CCcEEEEECC-CcEEEEecCC------cEEEeeccC
Q 017317 85 DRNGVLYTATRDGWIKRLHKNG-TWENWKLIGGDTLLGITTTQ-ENEILVCDAD-KGLLKVTEEG------VTVLASHVN 155 (373)
Q Consensus 85 d~~G~l~v~~~~g~I~~~~~~g-~~~~~~~~~~~p~~gl~~d~-~g~L~va~~~-~gl~~~~~~g------~~~l~~~~~ 155 (373)
++...|++... ..|.+++.++ +.+.+......|. +|++++ .+.||+++.. +.|++++.++ ...+.
T Consensus 375 ~~~~~ll~~~~-~~I~~id~~~~~~~~~~~~~~~p~-gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i---- 448 (699)
T 1n7d_A 375 GSIAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVI---- 448 (699)
T ss_dssp SSCCCBCCCCT-TC-CEECTTSCCEECCSCCCTTCC-CCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBC----
T ss_pred ccceeEEecCc-cceEEEeCCCCcceeeeccCcceE-EEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEE----
Confidence 33455665443 4688888544 4444445567899 999996 5689999765 4688887322 11111
Q ss_pred CccccccceeEEc-CCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcceEEEccCCCEEE
Q 017317 156 GSRINLADDLIAA-TDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDEDYLV 233 (373)
Q Consensus 156 ~~~~~~~~~l~~~-~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~gi~~~~dg~~l~ 233 (373)
...+..|.+|+++ ..|+||+++.. .++|+++++++...+.+. ..+..|++|++++++.+||
T Consensus 449 ~~~~~~P~glavD~~~g~LY~tD~~-----------------~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly 511 (699)
T 1n7d_A 449 SRDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMY 511 (699)
T ss_dssp CSCC--CCCEECCCSSSBCEECCTT-----------------TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCE
T ss_pred eCCCCCcceEEEEeeCCcEEEEecc-----------------CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEE
Confidence 1224468899999 46799999864 468999999876655554 4578899999999877899
Q ss_pred EEeCCC-CeEEEEEecCCCCcceeEEecCCCCCCCceeECCC-CCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhh
Q 017317 234 VCETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPD-GSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKL 311 (373)
Q Consensus 234 v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~d-G~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 311 (373)
|++... ++|++++++|... ..+.......|++|++|++ ++||++....
T Consensus 512 ~td~~~~~~I~~~~~dG~~~---~~l~~~~l~~PnGlavd~~~~~LY~aD~~~--------------------------- 561 (699)
T 1n7d_A 512 WTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLDLLSGRLYWVDSKL--------------------------- 561 (699)
T ss_dssp ECCCSSSCCEEBCCSSSCCC---CEESCSSCSSCCCEEECTTTCCEEEEETTT---------------------------
T ss_pred EcccCCCCeEEEEeCCCCCe---eEEEeCCCCCccEEEEeccCCEEEEEecCC---------------------------
Confidence 999765 7899998876432 2232222357999999975 6899998653
Q ss_pred ccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCC
Q 017317 312 VAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 312 ~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~ 371 (373)
..|.+++.+|...+.+....+ .+..+.++...+++||+....++.|.+++..
T Consensus 562 -------~~I~~~d~dG~~~~~~~~~~~-~~~~P~glavd~~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 562 -------HSISSIDVNGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp -------TEEEEECSSSSCCEEECCCSS-SCSSCCCCEEETTEEEEECSTTTCEEEEETT
T ss_pred -------CeEEEEccCCCceEEEEecCC-cCCCceEeEEECCEEEEEeCCCCeEEEEEcc
Confidence 247888888866555543222 2345666776778999999999999999753
No 73
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.53 E-value=1.5e-12 Score=124.27 Aligned_cols=183 Identities=13% Similarity=0.145 Sum_probs=126.1
Q ss_pred CcCCcceEEE-------ecCCC-EEEEecCC-------eEEEEE--cCCceE------EeeeecCccccCeEECC-CCcE
Q 017317 75 ILNGPEDVCV-------DRNGV-LYTATRDG-------WIKRLH--KNGTWE------NWKLIGGDTLLGITTTQ-ENEI 130 (373)
Q Consensus 75 ~~~~P~~ia~-------d~~G~-l~v~~~~g-------~I~~~~--~~g~~~------~~~~~~~~p~~gl~~d~-~g~L 130 (373)
.+..|..|++ +++|. ||+++..+ .|+.++ .+|.+. .+. ....|+ ++++++ ++.|
T Consensus 184 ~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~-giavdp~~g~L 261 (496)
T 3kya_A 184 PTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCN-GATIHPINGEL 261 (496)
T ss_dssp SCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCC-CEEECTTTCCE
T ss_pred ccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-cCCCce-EEEEcCCCCeE
Confidence 3567999999 99887 99888654 377886 334552 333 456789 999998 6789
Q ss_pred EEEECCCc-EEEEe-c-------CC-c-E-----------EEeeccCCccccccceeEEcCCCc-EEEEeCCcccccccc
Q 017317 131 LVCDADKG-LLKVT-E-------EG-V-T-----------VLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNW 187 (373)
Q Consensus 131 ~va~~~~g-l~~~~-~-------~g-~-~-----------~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~ 187 (373)
|+++...+ |++++ . ++ . + .+... . ....+..|+++++|+ |||+|..
T Consensus 262 Yvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~--~~~~p~~ia~~p~G~~lYvaD~~-------- 330 (496)
T 3kya_A 262 YFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-A--DPSWEFQIFIHPTGKYAYFGVIN-------- 330 (496)
T ss_dssp EEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-S--SSSCCEEEEECTTSSEEEEEETT--------
T ss_pred EEEECCCCEEEEEecccccccccCceeecccccccccccceeEec-C--CCCCceEEEEcCCCCEEEEEeCC--------
Confidence 99998766 89999 5 55 4 1 22211 1 123578999999997 8999975
Q ss_pred ccccccccCCceEEEEeCC--CCeE---EEeec---------------CCCCcc-eEEEc-------cCCCEEEEEeCCC
Q 017317 188 GLDLLEAKPHGKLLKYDPS--LNET---SILLD---------------SLFFAN-GVALS-------KDEDYLVVCETFK 239 (373)
Q Consensus 188 ~~~~~~~~~~g~l~~~d~~--~~~~---~~~~~---------------~~~~~~-gi~~~-------~dg~~l~v~~~~~ 239 (373)
+.+|++++.+ ++.+ ..++. .+..|. |++++ .+|+ |||+++.+
T Consensus 331 ---------~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~-lyVaD~~N 400 (496)
T 3kya_A 331 ---------NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYD-FYFVDRLN 400 (496)
T ss_dssp ---------TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEE-EEEEEGGG
T ss_pred ---------CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCe-EEEEECCC
Confidence 4689986543 3332 22221 245688 78886 4555 99999999
Q ss_pred CeEEEEEecCCCCcceeEEecC-----------------------CCCCCCceeECCC-CCEEEEEecC
Q 017317 240 FRCLKYWLKGESKEQTEIFVEN-----------------------LPGGPDNIKLAPD-GSFWIAILQL 284 (373)
Q Consensus 240 ~~i~~~~~~~~~~~~~~~~~~~-----------------------~~g~p~~i~~d~d-G~lwva~~~~ 284 (373)
++|.+++.+|. ...+... ....|.++++|++ |+|||+....
T Consensus 401 ~rIr~i~~~G~----v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N 465 (496)
T 3kya_A 401 FCVRKVTPEGI----VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVG 465 (496)
T ss_dssp TEEEEECTTCB----EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTT
T ss_pred CEEEEEeCCCC----EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCC
Confidence 99999985442 2222111 1125888999997 9999999765
No 74
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.52 E-value=3.8e-12 Score=116.23 Aligned_cols=181 Identities=14% Similarity=0.171 Sum_probs=125.4
Q ss_pred CCcceEEEecCCCEEEEecC-----CeEEEEEcCC-ceEEeee---ecCccccCeEECCCCcEEEEECC-------CcEE
Q 017317 77 NGPEDVCVDRNGVLYTATRD-----GWIKRLHKNG-TWENWKL---IGGDTLLGITTTQENEILVCDAD-------KGLL 140 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~-----g~I~~~~~~g-~~~~~~~---~~~~p~~gl~~d~~g~L~va~~~-------~gl~ 140 (373)
..|.+++++++|++|+++.. ++|++++.++ +.+.+.. ....+. +++++++|++|+++.. .+|+
T Consensus 87 ~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~l~ 165 (333)
T 2dg1_A 87 ANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCID-DMVFDSKGGFYFTDFRGYSTNPLGGVY 165 (333)
T ss_dssp SSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEE-EEEECTTSCEEEEECCCBTTBCCEEEE
T ss_pred CCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCccc-ceEECCCCCEEEEeccccccCCCceEE
Confidence 56899999999999988754 4899999554 4432221 234577 9999999999999763 4688
Q ss_pred EEe-cCC-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCC--CeEEEe--
Q 017317 141 KVT-EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL--NETSIL-- 213 (373)
Q Consensus 141 ~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~--~~~~~~-- 213 (373)
+++ ..+ .+.+... ...++++++++||+ +|+++.. .+.|+++|.++ .....+
T Consensus 166 ~~~~~~~~~~~~~~~-----~~~~~~i~~~~dg~~l~v~~~~-----------------~~~i~~~d~~~~g~~~~~~~~ 223 (333)
T 2dg1_A 166 YVSPDFRTVTPIIQN-----ISVANGIALSTDEKVLWVTETT-----------------ANRLHRIALEDDGVTIQPFGA 223 (333)
T ss_dssp EECTTSCCEEEEEEE-----ESSEEEEEECTTSSEEEEEEGG-----------------GTEEEEEEECTTSSSEEEEEE
T ss_pred EEeCCCCEEEEeecC-----CCcccceEECCCCCEEEEEeCC-----------------CCeEEEEEecCCCcCcccccc
Confidence 898 445 4444321 23578999999995 9998753 36888888742 222211
Q ss_pred -----ecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCC--C---CCCceeECCCC-CEEEEEe
Q 017317 214 -----LDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLP--G---GPDNIKLAPDG-SFWIAIL 282 (373)
Q Consensus 214 -----~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--g---~p~~i~~d~dG-~lwva~~ 282 (373)
..+...|.+++++++|+ +|+++..+++|.+|+.++. ....+..... + .|.++++++|| +||+++.
T Consensus 224 ~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~---~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 224 TIPYYFTGHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGY---PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEEEECCSSSEEEEEEEBTTCC-EEEEEETTTEEEEECTTSC---EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred eEEEecCCCCCCCceEECCCCC-EEEEEcCCCEEEEECCCCC---EEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 11224688999999998 9999877789999986442 2222321111 1 58899999887 7999987
Q ss_pred cC
Q 017317 283 QL 284 (373)
Q Consensus 283 ~~ 284 (373)
.+
T Consensus 300 ~g 301 (333)
T 2dg1_A 300 DI 301 (333)
T ss_dssp CG
T ss_pred cc
Confidence 64
No 75
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.51 E-value=2e-11 Score=108.96 Aligned_cols=216 Identities=14% Similarity=0.087 Sum_probs=148.0
Q ss_pred cCCCEEEEecCCeEEEEEc-CCceEEeeeec--CccccCeEECCCCcEEEEECCCcEEEEecCC-cEEEeeccCCccccc
Q 017317 86 RNGVLYTATRDGWIKRLHK-NGTWENWKLIG--GDTLLGITTTQENEILVCDADKGLLKVTEEG-VTVLASHVNGSRINL 161 (373)
Q Consensus 86 ~~G~l~v~~~~g~I~~~~~-~g~~~~~~~~~--~~p~~gl~~d~~g~L~va~~~~gl~~~~~~g-~~~l~~~~~~~~~~~ 161 (373)
|+..|++++.+++|+.+++ +|+........ ..++ ++++.++|+++++ ...+++.++++| ...-..... ...
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~-~~~~~pdG~ilvs-~~~~V~~~d~~G~~~W~~~~~~---~~~ 78 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECN-SVAATKAGEILFS-YSKGAKMITRDGRELWNIAAPA---GCE 78 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCC-EEEECTTSCEEEE-CBSEEEEECTTSCEEEEEECCT---TCE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCc-CeEECCCCCEEEe-CCCCEEEECCCCCEEEEEcCCC---Ccc
Confidence 3555567778899999996 88754332222 2577 8899999999995 457899999767 322222111 123
Q ss_pred cceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee--cC----CCCcceEEEccCCCEEEEE
Q 017317 162 ADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL--DS----LFFANGVALSKDEDYLVVC 235 (373)
Q Consensus 162 ~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~----~~~~~gi~~~~dg~~l~v~ 235 (373)
+.++.+.+||++++++.. ..++++.+|++++....+. .. ...+.+++++++|+ ++++
T Consensus 79 ~~~~~~~~dG~~lv~~~~----------------~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~ 141 (276)
T 3no2_A 79 MQTARILPDGNALVAWCG----------------HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVP 141 (276)
T ss_dssp EEEEEECTTSCEEEEEES----------------TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEE
T ss_pred ccccEECCCCCEEEEecC----------------CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEE
Confidence 456788899999998642 1468999998755443322 11 23467888999998 7788
Q ss_pred eCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCC
Q 017317 236 ETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPL 315 (373)
Q Consensus 236 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 315 (373)
...+++|..|+.+|+. ...+. .++.|.+....++|+++++....
T Consensus 142 ~~~~~~v~~~d~~G~~---~w~~~--~~~~~~~~~~~~~g~~~v~~~~~------------------------------- 185 (276)
T 3no2_A 142 LFATSEVREIAPNGQL---LNSVK--LSGTPFSSAFLDNGDCLVACGDA------------------------------- 185 (276)
T ss_dssp ETTTTEEEEECTTSCE---EEEEE--CSSCCCEEEECTTSCEEEECBTT-------------------------------
T ss_pred ecCCCEEEEECCCCCE---EEEEE--CCCCccceeEcCCCCEEEEeCCC-------------------------------
Confidence 8888999999976431 22222 23567788899999999987654
Q ss_pred CccEEEEEECCC-CcEEEEEeCC--CCceecceeEEEEe-CCEEEEeeCCC
Q 017317 316 HKKAAVVNVAAN-GIVIRKFEDP--NGKVMSFVTSALEF-DDHLYLGSLNT 362 (373)
Q Consensus 316 ~~~g~v~~~~~~-g~~~~~~~~~--~g~~~~~~~~~~~~-~g~L~vgs~~~ 362 (373)
+.++.+|++ |+.+..+... .+..+..++.+... +|++|++++.+
T Consensus 186 ---~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g 233 (276)
T 3no2_A 186 ---HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQG 233 (276)
T ss_dssp ---SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECT
T ss_pred ---CeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccC
Confidence 258999988 9999998643 23234556776654 68999999744
No 76
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.48 E-value=3.5e-11 Score=110.41 Aligned_cols=188 Identities=16% Similarity=0.141 Sum_probs=122.4
Q ss_pred cCCcceEEEecCCC-EEEEe-cCCeEEEEE--cCCceEEeeeec------------CccccCeEECCCCcEEEEECCCc-
Q 017317 76 LNGPEDVCVDRNGV-LYTAT-RDGWIKRLH--KNGTWENWKLIG------------GDTLLGITTTQENEILVCDADKG- 138 (373)
Q Consensus 76 ~~~P~~ia~d~~G~-l~v~~-~~g~I~~~~--~~g~~~~~~~~~------------~~p~~gl~~d~~g~L~va~~~~g- 138 (373)
...|..++++++|+ ||++. .++.|..++ .+|..+.+.... ..+. +++++++|++|+++...+
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~spdg~l~v~~~~~~~ 163 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH-YTDLTPDNRLAVIDLGSDK 163 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE-EEEECTTSCEEEEETTTTE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce-EEEECCCCcEEEEeCCCCE
Confidence 46799999999887 77777 668888887 455544332211 1356 799999999999876544
Q ss_pred EEEEe-c-CC-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCce--EEEEeCCCCeEEE
Q 017317 139 LLKVT-E-EG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGK--LLKYDPSLNETSI 212 (373)
Q Consensus 139 l~~~~-~-~g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~--l~~~d~~~~~~~~ 212 (373)
+..++ . +| ........ ......+..++++|||+ +|+++.. .+. +|.++..+++.+.
T Consensus 164 v~~~~~~~~g~~~~~~~~~-~~~g~~p~~~~~spdg~~l~v~~~~-----------------~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLT-MEAGFGPRHLVFSPDGQYAFLAGEL-----------------SSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp EEEEEECTTSCEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTTTEEEE
T ss_pred EEEEEECCCCcEEEeeeEE-cCCCCCCceEEECCCCCEEEEEeCC-----------------CCEEEEEEecCCCCceEE
Confidence 66676 4 56 44432211 11223577899999997 8887643 234 5555554566543
Q ss_pred eec--C-------CCCcceEEEccCCCEEEEEeCCCCeEEEEEecCC-CCcceeEEecCCCCCCCceeECCCCC-EEEEE
Q 017317 213 LLD--S-------LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE-SKEQTEIFVENLPGGPDNIKLAPDGS-FWIAI 281 (373)
Q Consensus 213 ~~~--~-------~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~ 281 (373)
... . ...+.+++|+|||++||+++...+.|..|+++.. .......+. .....|.++++++||+ ||++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS-TEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE-CSSSCCCEEEECTTSSEEEEEE
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe-cCCCCcCeEEECCCCCEEEEEE
Confidence 211 1 1346789999999999999988889999997632 111111111 1234689999999997 67776
Q ss_pred ec
Q 017317 282 LQ 283 (373)
Q Consensus 282 ~~ 283 (373)
..
T Consensus 305 ~~ 306 (347)
T 3hfq_A 305 QN 306 (347)
T ss_dssp TT
T ss_pred cC
Confidence 54
No 77
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.48 E-value=4.2e-11 Score=106.88 Aligned_cols=224 Identities=10% Similarity=0.054 Sum_probs=148.3
Q ss_pred CCcceEEEecCCCEEEEecCCeEEEEEcCCceEEeeeec--CccccCeEECCCCcEEEEECC--CcEEEEecCC--cEEE
Q 017317 77 NGPEDVCVDRNGVLYTATRDGWIKRLHKNGTWENWKLIG--GDTLLGITTTQENEILVCDAD--KGLLKVTEEG--VTVL 150 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~g~I~~~~~~g~~~~~~~~~--~~p~~gl~~d~~g~L~va~~~--~gl~~~~~~g--~~~l 150 (373)
..+.+++++++|++++ +.+++|+.++++|+........ .... +..+.++|++++++.. ..++.++++| +..+
T Consensus 37 ~~~~~~~~~pdG~ilv-s~~~~V~~~d~~G~~~W~~~~~~~~~~~-~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~ 114 (276)
T 3no2_A 37 WECNSVAATKAGEILF-SYSKGAKMITRDGRELWNIAAPAGCEMQ-TARILPDGNALVAWCGHPSTILEVNMKGEVLSKT 114 (276)
T ss_dssp CCCCEEEECTTSCEEE-ECBSEEEEECTTSCEEEEEECCTTCEEE-EEEECTTSCEEEEEESTTEEEEEECTTSCEEEEE
T ss_pred CCCcCeEECCCCCEEE-eCCCCEEEECCCCCEEEEEcCCCCcccc-ccEECCCCCEEEEecCCCCEEEEEeCCCCEEEEE
Confidence 4688999999999999 5678899999888643322222 2344 6778899999998654 4577778767 2222
Q ss_pred eeccC-CccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCC
Q 017317 151 ASHVN-GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDE 229 (373)
Q Consensus 151 ~~~~~-~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg 229 (373)
..... ..+...+..++++++|++++++.. .+.|+.+|++ ++..........|.++...++|
T Consensus 115 ~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----------------~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g 176 (276)
T 3no2_A 115 EFETGIERPHAQFRQINKNKKGNYLVPLFA-----------------TSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNG 176 (276)
T ss_dssp EECCSCSSGGGSCSCCEECTTSCEEEEETT-----------------TTEEEEECTT-SCEEEEEECSSCCCEEEECTTS
T ss_pred eccCCCCcccccccCceECCCCCEEEEecC-----------------CCEEEEECCC-CCEEEEEECCCCccceeEcCCC
Confidence 21111 112235667889999999998753 5789999998 5544333333567888999999
Q ss_pred CEEEEEeCCCCeEEEEEecCCCCcceeEEec-CCC----CCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHh
Q 017317 230 DYLVVCETFKFRCLKYWLKGESKEQTEIFVE-NLP----GGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAA 304 (373)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~----g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~ 304 (373)
+ +++++..+++|+.++.+..+. ...+.. ..+ ..|.++.+.++|+++++...+...--
T Consensus 177 ~-~~v~~~~~~~v~~~d~~tG~~--~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~--------------- 238 (276)
T 3no2_A 177 D-CLVACGDAHCFVQLNLESNRI--VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREA--------------- 238 (276)
T ss_dssp C-EEEECBTTSEEEEECTTTCCE--EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTG---------------
T ss_pred C-EEEEeCCCCeEEEEeCcCCcE--EEEecCCCCCCccccccccceEcCCCCEEEEeccCccccc---------------
Confidence 8 778877788999998762221 122221 111 23778889999999999875421000
Q ss_pred cchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEE
Q 017317 305 FPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSAL 349 (373)
Q Consensus 305 ~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~ 349 (373)
.....+.+++++++|+++..|.+... +..+++++
T Consensus 239 ---------~~~~~~~~~~~~~~g~~~W~~~~~~~--~~~~~~~~ 272 (276)
T 3no2_A 239 ---------GKGKHPQLVEIDSEGKVVWQLNDKVK--FGMISTIC 272 (276)
T ss_dssp ---------GGSCCCSEEEECTTSBEEEEECCTTT--SCCCCEEE
T ss_pred ---------cccCCceEEEECCCCCEEEEecCccc--ccceeeee
Confidence 00012358999999999999876432 45666654
No 78
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.47 E-value=1.8e-12 Score=119.44 Aligned_cols=187 Identities=12% Similarity=0.170 Sum_probs=127.9
Q ss_pred CCcCCcceEEEecCCCEEEEec------CCeEEEEEc-CCce-EEeeee------cCccccCeEECC-CCcEEEEEC---
Q 017317 74 GILNGPEDVCVDRNGVLYTATR------DGWIKRLHK-NGTW-ENWKLI------GGDTLLGITTTQ-ENEILVCDA--- 135 (373)
Q Consensus 74 g~~~~P~~ia~d~~G~l~v~~~------~g~I~~~~~-~g~~-~~~~~~------~~~p~~gl~~d~-~g~L~va~~--- 135 (373)
+.+..|.+|++|++|+||+.+. .++|++++. +|+. ..+... ...+. ++++++ +|.+|+++.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~-~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVN-DLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCC-EEEEETTTTEEEEEECCSG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccc-eEEEecCCCEEEEEcCccC
Confidence 3477899999999999997663 479999994 5763 333211 13467 999996 568999986
Q ss_pred -CCcEEEEe-cCC-cEEEeec------------cCCccc-------------cccceeEEcCCC-cEEEEeCCccccccc
Q 017317 136 -DKGLLKVT-EEG-VTVLASH------------VNGSRI-------------NLADDLIAATDG-SIYFSVASTKFGLHN 186 (373)
Q Consensus 136 -~~gl~~~~-~~g-~~~l~~~------------~~~~~~-------------~~~~~l~~~~dG-~l~v~~~~~~~~~~~ 186 (373)
..+|+.++ .+| ...+... ..+..+ ..+++|++++|| .||+++..
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~------- 215 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH------- 215 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS-------
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC-------
Confidence 36788888 556 3332211 011111 246899999999 59998764
Q ss_pred cccccccccCCceEEEEeCCC---Ce---------EEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEe-cCCCCc
Q 017317 187 WGLDLLEAKPHGKLLKYDPSL---NE---------TSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWL-KGESKE 253 (373)
Q Consensus 187 ~~~~~~~~~~~g~l~~~d~~~---~~---------~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~-~~~~~~ 253 (373)
...||+++.+. +. +.. ......|+|++++++|+ +|+++...++|.+|+. ++
T Consensus 216 ----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G---- 279 (343)
T 2qe8_A 216 ----------STSMYRIKSADLSNLQLTDAELGSKIER-YSEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADR---- 279 (343)
T ss_dssp ----------CSEEEEEEHHHHTCTTCCHHHHHTTCEE-EEECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTT----
T ss_pred ----------CCeEEEEEHHHhcCCCCChhhhhcceEe-cccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCC----
Confidence 24899987421 10 111 11234789999999997 9999999999999996 43
Q ss_pred ceeEEecC-CCCCCCceeECCCCCEEEEEecC
Q 017317 254 QTEIFVEN-LPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 254 ~~~~~~~~-~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
+...+... ....|.+++++++|++|+++...
T Consensus 280 ~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 280 AYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp EEEEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred CEEEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 23333322 13469999999999999998753
No 79
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.46 E-value=5.3e-11 Score=108.21 Aligned_cols=227 Identities=14% Similarity=0.099 Sum_probs=148.0
Q ss_pred cCCCEEEEe-cCCeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEEC-CCcEEEEe-cCC-c-EEEeeccCCcc
Q 017317 86 RNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDA-DKGLLKVT-EEG-V-TVLASHVNGSR 158 (373)
Q Consensus 86 ~~G~l~v~~-~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~-~~gl~~~~-~~g-~-~~l~~~~~~~~ 158 (373)
..+.+|+.. .++.|..++ .+|+..........+. +++++++|+ ||++.. ...++.++ .++ . ......
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~----- 81 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQE----- 81 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEE-----
T ss_pred CCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEeccc-----
Confidence 367778655 678999999 5566544444445566 899999997 888876 34688888 566 4 322221
Q ss_pred ccccce-eEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeC
Q 017317 159 INLADD-LIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237 (373)
Q Consensus 159 ~~~~~~-l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~ 237 (373)
...+.. ++++++|+..++... ....+.|+.+|.++++..........|++++++|||+++|+++.
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~--------------~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 147 (331)
T 3u4y_A 82 GQSSMADVDITPDDQFAVTVTG--------------LNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDR 147 (331)
T ss_dssp CSSCCCCEEECTTSSEEEECCC--------------SSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEE
T ss_pred CCCCccceEECCCCCEEEEecC--------------CCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEec
Confidence 123456 999999974444321 00112899999988876655555567899999999999999988
Q ss_pred CCCe-EEEEEecCCCC-cce-eEEecCCCCCCCceeECCCCC-EEEEEecCCCchhhhccCChHHHHHHHhcchhhhhcc
Q 017317 238 FKFR-CLKYWLKGESK-EQT-EIFVENLPGGPDNIKLAPDGS-FWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVA 313 (373)
Q Consensus 238 ~~~~-i~~~~~~~~~~-~~~-~~~~~~~~g~p~~i~~d~dG~-lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 313 (373)
..+. +..|+++.... ... .... .....|.+++++++|+ +|++....
T Consensus 148 ~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~----------------------------- 197 (331)
T 3u4y_A 148 SSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIG----------------------------- 197 (331)
T ss_dssp TTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTT-----------------------------
T ss_pred CCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCC-----------------------------
Confidence 7777 88888764321 111 1111 2234588899999997 78887543
Q ss_pred CCCccEEEEEECC-CCcE---EEEEeCCCCceecceeEEEEe-CC-EEEEeeCCCCeEEEeeCCC
Q 017317 314 PLHKKAAVVNVAA-NGIV---IRKFEDPNGKVMSFVTSALEF-DD-HLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 314 ~~~~~g~v~~~~~-~g~~---~~~~~~~~g~~~~~~~~~~~~-~g-~L~vgs~~~~~i~~~~l~~ 372 (373)
+.+..++. +++. +..+... ..+..+..+ +| .||+++...+.|..+++..
T Consensus 198 -----~~v~v~d~~~~~~~~~~~~~~~~-----~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~ 252 (331)
T 3u4y_A 198 -----NSIGILETQNPENITLLNAVGTN-----NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLS 252 (331)
T ss_dssp -----TEEEEEECSSTTSCEEEEEEECS-----SCCCCEEECTTSSEEEEECSSEEEEEEEETTT
T ss_pred -----CeEEEEECCCCcccceeeeccCC-----CCCceEEECCCCCEEEEEEcCCCEEEEEECCC
Confidence 13556664 4565 5555432 234555555 33 5888888778888887753
No 80
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.45 E-value=1.2e-10 Score=107.89 Aligned_cols=247 Identities=13% Similarity=0.072 Sum_probs=145.3
Q ss_pred cCCcceEEEecCCC-EEEEecCCeEEEEE-c-CCceEEeee--ecCccccCeEECCCCc-EEE--EE-------------
Q 017317 76 LNGPEDVCVDRNGV-LYTATRDGWIKRLH-K-NGTWENWKL--IGGDTLLGITTTQENE-ILV--CD------------- 134 (373)
Q Consensus 76 ~~~P~~ia~d~~G~-l~v~~~~g~I~~~~-~-~g~~~~~~~--~~~~p~~gl~~d~~g~-L~v--a~------------- 134 (373)
...|..++++++|+ ||+++.+ .|..++ . +|+...... ..+.|. +++++++|+ ||+ ++
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPR-ANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGG-GGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCc-cEEECCCCCEEEEEEecCCcceeccceeec
Confidence 45799999999987 7777766 888887 3 676543322 124578 899999998 343 32
Q ss_pred CCCcEEEEe--cCC-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCC-CCe
Q 017317 135 ADKGLLKVT--EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS-LNE 209 (373)
Q Consensus 135 ~~~gl~~~~--~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~~ 209 (373)
..+.+..++ .+| ...............+.+++++|||+ +|+++.. .+.|+.++.+ +++
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~-----------------~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT-----------------ANKLWTHRKLASGE 179 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTSC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC-----------------CCEEEEEEECCCCC
Confidence 222344444 355 32211111001124578999999996 7777643 3577777766 566
Q ss_pred EEEee--c---CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCC--CCcc-eeEEecCCC----C---------CCCc
Q 017317 210 TSILL--D---SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE--SKEQ-TEIFVENLP----G---------GPDN 268 (373)
Q Consensus 210 ~~~~~--~---~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~--~~~~-~~~~~~~~~----g---------~p~~ 268 (373)
...+. . ....|.+++|+|||+++|+++...+.+..|+++.. +... ...+. .++ + .|.+
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~ 258 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFP-LIPPGIPDRDPETGKGLYRAD 258 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEE-SSCTTCCCBCTTTSSBSEEEE
T ss_pred EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEE-cCCCCcCCccccccccccccc
Confidence 54321 1 14568899999999999999887788888876531 1110 11111 111 1 3667
Q ss_pred ee-ECCCCC-EEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEE---EeCCCCceec
Q 017317 269 IK-LAPDGS-FWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRK---FEDPNGKVMS 343 (373)
Q Consensus 269 i~-~d~dG~-lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~---~~~~~g~~~~ 343 (373)
++ +++||+ ||++....... ......++.++.+|+.... ....... .
T Consensus 259 i~~~spdG~~l~v~~~~~~~~---------------------------~~~~i~v~~~~~~g~~~~~~~~~~~~~~~--~ 309 (365)
T 1jof_A 259 VCALTFSGKYMFASSRANKFE---------------------------LQGYIAGFKLRDCGSIEKQLFLSPTPTSG--G 309 (365)
T ss_dssp EEEECTTSSEEEEEEEESSTT---------------------------SCCEEEEEEECTTSCEEEEEEEEECSSCC--T
T ss_pred EEEECCCCCEEEEECCCCCCC---------------------------CCCeEEEEEECCCCCEEEeeeeeecCCCC--c
Confidence 89 999996 67766543100 0001234555556775542 2211111 1
Q ss_pred ceeEEEE---eCCEEEEeeCCCCeEEEeeCC
Q 017317 344 FVTSALE---FDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 344 ~~~~~~~---~~g~L~vgs~~~~~i~~~~l~ 371 (373)
..-.+.. ++++||+++..++.|..++++
T Consensus 310 ~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 310 HSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp TCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred ccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 1112333 356899999888888887764
No 81
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.45 E-value=1.5e-11 Score=113.76 Aligned_cols=162 Identities=13% Similarity=0.109 Sum_probs=109.3
Q ss_pred ceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEecCC-cEEEeecc-CCccccccceeEEcCC----CcEEEEeCCc
Q 017317 107 TWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVTEEG-VTVLASHV-NGSRINLADDLIAATD----GSIYFSVAST 180 (373)
Q Consensus 107 ~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~~~g-~~~l~~~~-~~~~~~~~~~l~~~~d----G~l~v~~~~~ 180 (373)
+++.++.....|. +|+++++|+|||++..+.|++++ +| .+.+.... .......+.+|+++++ |.|||++...
T Consensus 22 ~~~~va~~l~~P~-~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 22 RVEEVVGGLEVPW-ALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CEEEEECCCSCEE-EEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEEECCCCCce-EEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 4556666667899 99999999999999877788887 56 54443211 1122457899999998 7999997531
Q ss_pred cccccccccccccccCCceEEEEeCCCCe---EEEeec-------CCCCcceEEEccCCCEEEEEeCC------------
Q 017317 181 KFGLHNWGLDLLEAKPHGKLLKYDPSLNE---TSILLD-------SLFFANGVALSKDEDYLVVCETF------------ 238 (373)
Q Consensus 181 ~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~-------~~~~~~gi~~~~dg~~l~v~~~~------------ 238 (373)
. .....+|++++.++++ .+.+.. ....++++++++||. ||++...
T Consensus 100 ~------------~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~ 166 (352)
T 2ism_A 100 E------------GGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLAS 166 (352)
T ss_dssp T------------TSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTC
T ss_pred C------------CCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCC
Confidence 0 0012578999876442 222222 235678999999996 9999632
Q ss_pred -CCeEEEEEecCCCC----------cceeEEecCCCCCCCceeECC-CCCEEEEEecC
Q 017317 239 -KFRCLKYWLKGESK----------EQTEIFVENLPGGPDNIKLAP-DGSFWIAILQL 284 (373)
Q Consensus 239 -~~~i~~~~~~~~~~----------~~~~~~~~~~~g~p~~i~~d~-dG~lwva~~~~ 284 (373)
..+|+|++.++.-. ...+++... ...|.++++|+ +|+||++..+.
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G-~rnp~g~a~d~~~g~l~v~d~g~ 223 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLG-HRNPQGLAWHPKTGELFSSEHGP 223 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEEC-CSEECCCEECTTTCCEEEEEECC
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEEEEc-CCCcccEEEECCCCCEEEEEcCC
Confidence 25899998765200 122344322 23589999999 89999999865
No 82
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.43 E-value=2.6e-11 Score=112.11 Aligned_cols=186 Identities=12% Similarity=0.089 Sum_probs=120.9
Q ss_pred cCCcceEEEecC----CCEEEEecC--------CeEEEEEcCCc------eEEeee-e----cCccccCeEECCCCcEEE
Q 017317 76 LNGPEDVCVDRN----GVLYTATRD--------GWIKRLHKNGT------WENWKL-I----GGDTLLGITTTQENEILV 132 (373)
Q Consensus 76 ~~~P~~ia~d~~----G~l~v~~~~--------g~I~~~~~~g~------~~~~~~-~----~~~p~~gl~~d~~g~L~v 132 (373)
..+|.+|+++++ |.||+.... ++|.+++.++. .+.+.. . ...+. +|++++||.||+
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~-~l~~~pDG~Lyv 150 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGG-RIRFGPDGMLYI 150 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCC-CEEECTTSCEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCc-eEEECCCCcEEE
Confidence 467999999986 999987642 68999985432 222211 1 12467 899999999999
Q ss_pred EECC--------------CcEEEEecCC-c---------EEEeeccCCccccccceeEEcC-CCcEEEEeCCcccccccc
Q 017317 133 CDAD--------------KGLLKVTEEG-V---------TVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNW 187 (373)
Q Consensus 133 a~~~--------------~gl~~~~~~g-~---------~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~ 187 (373)
+... ..|++++.+| + ++++ ..+..|++|++++ +|+||+++.....
T Consensus 151 t~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a-----~G~rnp~Gla~d~~~g~l~v~d~g~~~----- 220 (354)
T 3a9g_A 151 TTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWS-----YGHRNPQGIDWHRASGVMVATEHGPVG----- 220 (354)
T ss_dssp ECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEE-----ECCSCCCEEEECTTTCCEEEEECCSSS-----
T ss_pred EECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEE-----EccCCcceEEEeCCCCCEEEEecCCCC-----
Confidence 8532 2588888555 2 2222 1245689999999 7999999865211
Q ss_pred ccccccccCCceEEEEeCCC--------------CeEE--Eee-cCCCCcceEEEc-------cCCCEEEEEeCCCCeEE
Q 017317 188 GLDLLEAKPHGKLLKYDPSL--------------NETS--ILL-DSLFFANGVALS-------KDEDYLVVCETFKFRCL 243 (373)
Q Consensus 188 ~~~~~~~~~~g~l~~~d~~~--------------~~~~--~~~-~~~~~~~gi~~~-------~dg~~l~v~~~~~~~i~ 243 (373)
...|.++.+.. +... ... .....|.|+++. .+| .+|+++...++|.
T Consensus 221 ---------~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~ 290 (354)
T 3a9g_A 221 ---------HDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLA 290 (354)
T ss_dssp ---------CCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEE
T ss_pred ---------CcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEE
Confidence 11233332210 0000 011 223458899983 466 4999999999999
Q ss_pred EEEecCC-CCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 244 KYWLKGE-SKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 244 ~~~~~~~-~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
++++++. .....+.+.....+.|.++++++||.||+++.
T Consensus 291 ~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 291 AVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred EEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 9998753 22223344433356899999999999999986
No 83
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.41 E-value=1.4e-10 Score=101.47 Aligned_cols=195 Identities=15% Similarity=0.154 Sum_probs=130.1
Q ss_pred ccCCcCCcceEEEec-CCCEEE-EecCCeEEEEEcCCceEEeee--ecCccccCeEECCCCcEEEEECC-CcEEEEe--c
Q 017317 72 GEGILNGPEDVCVDR-NGVLYT-ATRDGWIKRLHKNGTWENWKL--IGGDTLLGITTTQENEILVCDAD-KGLLKVT--E 144 (373)
Q Consensus 72 ~~g~~~~P~~ia~d~-~G~l~v-~~~~g~I~~~~~~g~~~~~~~--~~~~p~~gl~~d~~g~L~va~~~-~gl~~~~--~ 144 (373)
..|-...+.++++++ ++.||+ .+.++.|++++.+|++..... ....+- ||+++.+|.+||++.. ++++.++ .
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~E-GIa~~~~g~~~vs~E~~~~l~~~~v~~ 100 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLE-TIEYIGDNQFVISDERDYAIYVISLTP 100 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEE-EEEECSTTEEEEEETTTTEEEEEEECT
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChH-HeEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 334446789999998 567994 668899999997787554332 235788 9999999999888643 4677766 3
Q ss_pred CC-cEEEeec-cC---CccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeC--CCCeEEEeec-
Q 017317 145 EG-VTVLASH-VN---GSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDP--SLNETSILLD- 215 (373)
Q Consensus 145 ~g-~~~l~~~-~~---~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~--~~~~~~~~~~- 215 (373)
++ +..+... .. ........+|++|+++ +||++... ....||.++. .+...+....
T Consensus 101 ~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~----------------~p~~i~~~~g~~~~~~l~i~~~~ 164 (255)
T 3qqz_A 101 NSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK----------------NPIEVYKVNGLLSSNELHISKDK 164 (255)
T ss_dssp TCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES----------------SSEEEEEEESTTCSSCCEEEECH
T ss_pred CCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc----------------CCceEEEEcccccCCceeeecch
Confidence 34 3322211 11 1223356799999987 89998643 2347888872 2222333211
Q ss_pred ------CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCC------CCCCCceeECCCCCEEEEEec
Q 017317 216 ------SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENL------PGGPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 216 ------~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~------~g~p~~i~~d~dG~lwva~~~ 283 (373)
....+.+++++|...++|+.....+.|..++.+|.. .......... .-.|.||++|++|+|||++-.
T Consensus 165 ~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~-~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~ 243 (255)
T 3qqz_A 165 ALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEV-IGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEP 243 (255)
T ss_dssp HHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCE-EEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETT
T ss_pred hhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCE-EEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCC
Confidence 244678999999999999999999999999977642 1111111111 125889999999999999755
Q ss_pred C
Q 017317 284 L 284 (373)
Q Consensus 284 ~ 284 (373)
.
T Consensus 244 n 244 (255)
T 3qqz_A 244 N 244 (255)
T ss_dssp T
T ss_pred c
Confidence 4
No 84
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.39 E-value=1.4e-09 Score=101.20 Aligned_cols=231 Identities=11% Similarity=0.123 Sum_probs=157.0
Q ss_pred CCcceEEEecCCC-EEEE-ecCCeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEECC-CcEEEEe-cCC-cEE
Q 017317 77 NGPEDVCVDRNGV-LYTA-TRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT-EEG-VTV 149 (373)
Q Consensus 77 ~~P~~ia~d~~G~-l~v~-~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~-~gl~~~~-~~g-~~~ 149 (373)
..|.++++.++|. ||++ ..++.|..++ .+++..........+. +++++++|+ ||++... +.|..++ .++ ...
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ-GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc-ceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 4588999999886 5554 4789999999 4666544444455777 999999996 7777654 5677788 566 322
Q ss_pred EeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccC
Q 017317 150 LASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKD 228 (373)
Q Consensus 150 l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~d 228 (373)
.... ...+.+++++++|+ +|++... .+.|+.+|..+++..........+..++++++
T Consensus 111 ~~~~-----~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~d 168 (391)
T 1l0q_A 111 TVKT-----GKSPLGLALSPDGKKLYVTNNG-----------------DKTVSVINTVTKAVINTVSVGRSPKGIAVTPD 168 (391)
T ss_dssp EEEC-----SSSEEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECCSSEEEEEECTT
T ss_pred EEeC-----CCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCcEEEEEecCCCcceEEECCC
Confidence 2221 12467899999996 7777643 47899999988877665555567889999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEecCCCchhhhccCChHHHHHHHhcch
Q 017317 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQLSSPGLEFVHTSKATKHLLAAFPK 307 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~ 307 (373)
++.+|++....+.|+.+++..... ...+ .....+.+++++++|+ +|++.....
T Consensus 169 g~~l~~~~~~~~~v~~~d~~~~~~--~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~---------------------- 222 (391)
T 1l0q_A 169 GTKVYVANFDSMSISVIDTVTNSV--IDTV--KVEAAPSGIAVNPEGTKAYVTNVDKY---------------------- 222 (391)
T ss_dssp SSEEEEEETTTTEEEEEETTTTEE--EEEE--ECSSEEEEEEECTTSSEEEEEEECSS----------------------
T ss_pred CCEEEEEeCCCCEEEEEECCCCeE--EEEE--ecCCCccceEECCCCCEEEEEecCcC----------------------
Confidence 999999988888999999764321 1111 1234567789999996 566653110
Q ss_pred hhhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeEEEEe--CCEEEEeeCCCCeEEEeeCC
Q 017317 308 LIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTSALEF--DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 308 ~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~vgs~~~~~i~~~~l~ 371 (373)
.+.+..+|. +++.+..+.... .+..+... +..||++....+.|..+++.
T Consensus 223 ----------~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 223 ----------FNTVSMIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp ----------CCEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ----------CCcEEEEECCCCeEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 124667774 466666665422 24555554 34788887777788888765
No 85
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.39 E-value=3.8e-11 Score=109.76 Aligned_cols=178 Identities=11% Similarity=0.073 Sum_probs=123.9
Q ss_pred CCcceEEEecCCCEEEEecCCeEEEEE-cCCceEEeeeec-----CccccCeEECCCCcEEEEECC-------CcEEEEe
Q 017317 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIG-----GDTLLGITTTQENEILVCDAD-------KGLLKVT 143 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~-----~~p~~gl~~d~~g~L~va~~~-------~gl~~~~ 143 (373)
..|.+++++++|++|+++. .+|++++ .+|+++.+.... ..+. ++++|++|++|+++.. .+|++++
T Consensus 90 ~~v~~i~~~~dg~l~v~~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 90 FMGSALAKISDSKQLIASD-DGLFLRDTATGVLTLHAELESDLPGNRSN-DGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp SCEEEEEEEETTEEEEEET-TEEEEEETTTCCEEEEECSSTTCTTEEEE-EEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred CcceEEEEeCCCeEEEEEC-CCEEEEECCCCcEEEEeeCCCCCCCCCCC-CEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 3578899999999999885 4699999 466766554321 2467 8999999999998642 4688888
Q ss_pred cCC-cEEEeeccCCccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCC--CC-eE---EEee-
Q 017317 144 EEG-VTVLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS--LN-ET---SILL- 214 (373)
Q Consensus 144 ~~g-~~~l~~~~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~--~~-~~---~~~~- 214 (373)
+| .+.+... ...++++++++|| .+|+++.. .+.|+++|.+ ++ +. +.+.
T Consensus 168 -~g~~~~~~~~-----~~~~~~i~~s~dg~~lyv~~~~-----------------~~~I~~~d~~~~~Gl~~~~~~~~~~ 224 (326)
T 2ghs_A 168 -KGKVTKLFAD-----ISIPNSICFSPDGTTGYFVDTK-----------------VNRLMRVPLDARTGLPTGKAEVFID 224 (326)
T ss_dssp -TTEEEEEEEE-----ESSEEEEEECTTSCEEEEEETT-----------------TCEEEEEEBCTTTCCBSSCCEEEEE
T ss_pred -CCcEEEeeCC-----CcccCCeEEcCCCCEEEEEECC-----------------CCEEEEEEcccccCCcccCceEEEE
Confidence 67 5544321 2357899999999 58998753 3689999864 45 31 1221
Q ss_pred --cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeEC-CCC-CEEEEEecC
Q 017317 215 --DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLA-PDG-SFWIAILQL 284 (373)
Q Consensus 215 --~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d-~dG-~lwva~~~~ 284 (373)
.....|.+++++++|+ +|++....++|.+|+.++.. ...+. .....|.+++++ +++ .||+++...
T Consensus 225 ~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~g~~---~~~i~-~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 225 STGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDTDGNH---IARYE-VPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp CTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECTTCCE---EEEEE-CSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECCCCCE---EEEEE-CCCCCcEEEEEecCCCCEEEEEecCC
Confidence 1235688999999997 99998777899999864421 22222 112247788887 676 589998754
No 86
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.39 E-value=4.4e-10 Score=102.18 Aligned_cols=186 Identities=13% Similarity=0.153 Sum_probs=118.8
Q ss_pred CCcceEEEecCCC-EEEEecC-CeEEEEEc---CCceEEeee--ecCccccCeEECCCCc-EEEEECCCc-EEEEe-cCC
Q 017317 77 NGPEDVCVDRNGV-LYTATRD-GWIKRLHK---NGTWENWKL--IGGDTLLGITTTQENE-ILVCDADKG-LLKVT-EEG 146 (373)
Q Consensus 77 ~~P~~ia~d~~G~-l~v~~~~-g~I~~~~~---~g~~~~~~~--~~~~p~~gl~~d~~g~-L~va~~~~g-l~~~~-~~g 146 (373)
..|.+++++++|+ ||++..+ +.|..++. +|+.+.... ..+.+. +++++++|+ ||++....+ +..++ .++
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT-HISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS-EEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCc-EEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 5689999999887 7777755 88888773 455443322 234778 999999997 778775444 66666 444
Q ss_pred -cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCC-CeEEEe------ecCC
Q 017317 147 -VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL-NETSIL------LDSL 217 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~~~~~~------~~~~ 217 (373)
.......... ...+.+++++++|+ +|+++.. .+.|+.+|..+ ++.... ....
T Consensus 117 ~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 177 (343)
T 1ri6_A 117 LPVGVVDVVEG--LDGCHSANISPDNRTLWVPALK-----------------QDRICLFTVSDDGHLVAQDPAEVTTVEG 177 (343)
T ss_dssp EEEEEEEEECC--CTTBCCCEECTTSSEEEEEEGG-----------------GTEEEEEEECTTSCEEEEEEEEEECSTT
T ss_pred ccccccccccC--CCCceEEEECCCCCEEEEecCC-----------------CCEEEEEEecCCCceeeecccccccCCC
Confidence 2222122221 13478899999995 7877632 36788887665 544321 1223
Q ss_pred CCcceEEEccCCCEEEEEeCCCCeEEEEEecCC--CCcceeEEecCCC-----CCCCceeECCCCC-EEEEEe
Q 017317 218 FFANGVALSKDEDYLVVCETFKFRCLKYWLKGE--SKEQTEIFVENLP-----GGPDNIKLAPDGS-FWIAIL 282 (373)
Q Consensus 218 ~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~-----g~p~~i~~d~dG~-lwva~~ 282 (373)
..|.+++++||++.+|++....+.+..|+++.. ............. ..+..++++++|+ +|++..
T Consensus 178 ~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~ 250 (343)
T 1ri6_A 178 AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDR 250 (343)
T ss_dssp CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEET
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEec
Confidence 467889999999999999888889999998532 2211222211111 1344689999996 555553
No 87
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.38 E-value=4.6e-11 Score=108.21 Aligned_cols=182 Identities=15% Similarity=0.123 Sum_probs=124.8
Q ss_pred CCcceEEEecCCCEEEEecC---CeEEEEE-cCCceEEeeee--cCccccCeEECCCCcEEEEEC-CCcEEEEe-cCC-c
Q 017317 77 NGPEDVCVDRNGVLYTATRD---GWIKRLH-KNGTWENWKLI--GGDTLLGITTTQENEILVCDA-DKGLLKVT-EEG-V 147 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~---g~I~~~~-~~g~~~~~~~~--~~~p~~gl~~d~~g~L~va~~-~~gl~~~~-~~g-~ 147 (373)
..|.+|+++++|+||+++.. .+|++++ .+|+++.+... ...+. |++...++.+|+++. ...|++++ ..+ .
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~-g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLN-GITPLSDTQYLTADSYRGAIWLIDVVQPSG 150 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEE-EEEESSSSEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccC-cccccCCCcEEEEECCCCeEEEEeCCCCcE
Confidence 46899999999999988732 3589988 67877665443 23456 888777788999985 45688888 444 3
Q ss_pred EEEe-ec-----cCCccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCC-Ce---EEEeecC
Q 017317 148 TVLA-SH-----VNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL-NE---TSILLDS 216 (373)
Q Consensus 148 ~~l~-~~-----~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~~---~~~~~~~ 216 (373)
++.. .. .....+..+++| ++|| .||+++.. .++|++|+.+. ++ .+.+. .
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~-----------------~~~I~~~~~~~~g~~~~~~~~~-~ 210 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTE-----------------KMLLLRIPVDSTDKPGEPEIFV-E 210 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETT-----------------TTEEEEEEBCTTSCBCCCEEEE-E
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCC-----------------CCEEEEEEeCCCCCCCccEEEe-c
Confidence 3321 11 111234567888 6666 79999864 47899998764 32 22222 2
Q ss_pred CCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEe-cCCC-CCCCceeEC---CCC-CEEEEEecC
Q 017317 217 LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFV-ENLP-GGPDNIKLA---PDG-SFWIAILQL 284 (373)
Q Consensus 217 ~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~-g~p~~i~~d---~dG-~lwva~~~~ 284 (373)
+..|.|++++++|+ +|+++..+++|.+|+.+|. ..... -..+ ..|.+++++ +|+ +|||++..+
T Consensus 211 ~~~P~gi~vd~dG~-l~va~~~~~~V~~~~~~G~----~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 211 QTNIDDFAFDVEGN-LYGATHIYNSVVRIAPDRS----TTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp SCCCSSEEEBTTCC-EEEECBTTCCEEEECTTCC----EEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECTT
T ss_pred cCCCCCeEECCCCC-EEEEeCCCCeEEEECCCCC----EEEEeecccccCCceEEEEecccCCCCEEEEECCCC
Confidence 36799999999997 9999998999999986542 21111 1122 468999998 675 699998764
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.38 E-value=1.4e-09 Score=100.37 Aligned_cols=239 Identities=15% Similarity=0.238 Sum_probs=144.3
Q ss_pred cCCcceEEEecCCC-EEEEecC----CeEEEEE--cC-CceEEeee---ecCccccCeEECCCC-cEEEEECCCc-EEEE
Q 017317 76 LNGPEDVCVDRNGV-LYTATRD----GWIKRLH--KN-GTWENWKL---IGGDTLLGITTTQEN-EILVCDADKG-LLKV 142 (373)
Q Consensus 76 ~~~P~~ia~d~~G~-l~v~~~~----g~I~~~~--~~-g~~~~~~~---~~~~p~~gl~~d~~g-~L~va~~~~g-l~~~ 142 (373)
...|..++++++|+ ||+++.+ +.|..++ .+ |+.+.+.. ....|. .+++ +| .||+++...+ +..+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~-~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC-YLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE-EEEE--CSSEEEEEETTTTEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE-EEEE--CCCEEEEEECCCCEEEEE
Confidence 57899999999887 7777653 6775554 43 65554432 235677 8888 45 5888875444 5556
Q ss_pred e-c-CC-cEEEee--ccCCc-------cccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceE--EEEeCCC
Q 017317 143 T-E-EG-VTVLAS--HVNGS-------RINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKL--LKYDPSL 207 (373)
Q Consensus 143 ~-~-~g-~~~l~~--~~~~~-------~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l--~~~d~~~ 207 (373)
+ . ++ ...+.. ...+. ....++.++++|||+ +|+++.. .+.+ |.++..+
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-----------------~~~v~v~~~~~~~ 188 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG-----------------TDQIHKFNINPNA 188 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTC
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-----------------CCEEEEEEEcCCC
Confidence 5 3 34 322111 01110 112357799999996 8888743 2444 4445544
Q ss_pred C----e-E-------EEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC--CCCCCCceeECC
Q 017317 208 N----E-T-------SILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDNIKLAP 273 (373)
Q Consensus 208 ~----~-~-------~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~ 273 (373)
+ + . .........|.+++|+|||+++|+++...+.|..|++++............ ....|.++++++
T Consensus 189 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~sp 268 (361)
T 3scy_A 189 NADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSP 268 (361)
T ss_dssp CTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECT
T ss_pred CcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECC
Confidence 3 2 1 122333456889999999999999998888999999874332222222111 112356899999
Q ss_pred CCC-EEEEEec-CCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC-CCCcE--EEEEeCCCCceecceeEE
Q 017317 274 DGS-FWIAILQ-LSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIV--IRKFEDPNGKVMSFVTSA 348 (373)
Q Consensus 274 dG~-lwva~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~--~~~~~~~~g~~~~~~~~~ 348 (373)
||+ ||++... .. ...++.++ .+|+. +..+.. + ..+..+
T Consensus 269 dg~~l~v~~~~~~~--------------------------------~i~v~~~~~~~g~~~~~~~~~~--g---~~~~~~ 311 (361)
T 3scy_A 269 DGKYLYASNRLKAD--------------------------------GVAIFKVDETNGTLTKVGYQLT--G---IHPRNF 311 (361)
T ss_dssp TSSEEEEEECSSSC--------------------------------EEEEEEECTTTCCEEEEEEEEC--S---SCCCEE
T ss_pred CCCEEEEECCCCCC--------------------------------EEEEEEEcCCCCcEEEeeEecC--C---CCCceE
Confidence 998 5666554 21 12355566 34553 333332 2 245566
Q ss_pred EEe-C-CEEEEeeCCCCeEEEeeCC
Q 017317 349 LEF-D-DHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 349 ~~~-~-g~L~vgs~~~~~i~~~~l~ 371 (373)
..+ + ..||+++..++.|..++++
T Consensus 312 ~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 312 IITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEECCCCCEEEEEEE
Confidence 665 3 4699999888888886554
No 89
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=99.37 E-value=8.5e-11 Score=112.08 Aligned_cols=167 Identities=16% Similarity=0.243 Sum_probs=110.8
Q ss_pred ceeEeccCCcCCcceEEEecCCC--EEEEecCCeEEEEEcCCce--EEeee-------e-----cCccccCeEECCC---
Q 017317 67 SVTRLGEGILNGPEDVCVDRNGV--LYTATRDGWIKRLHKNGTW--ENWKL-------I-----GGDTLLGITTTQE--- 127 (373)
Q Consensus 67 ~~~~~~~g~~~~P~~ia~d~~G~--l~v~~~~g~I~~~~~~g~~--~~~~~-------~-----~~~p~~gl~~d~~--- 127 (373)
.++.++++ |..|++|++.++|. |||+...|+|++++.+|.. +.+.. . .+.++ ||+++++
T Consensus 5 ~v~~va~g-L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gll-gia~~P~f~~ 82 (463)
T 2wg3_C 5 CIQEVVSG-LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLL-SLAFHPNYKK 82 (463)
T ss_dssp EEEEEEEE-ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEE-EEEECTTHHH
T ss_pred EEEEeccC-CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcce-eeEeCCCCcC
Confidence 45667776 89999999999884 9999999999999866542 11111 1 23467 8999975
Q ss_pred -CcEEEEECC-------------CcEEEEe-cC--------C-cEEEeeccCCccccccceeEEcCCCcEEEEeCCcccc
Q 017317 128 -NEILVCDAD-------------KGLLKVT-EE--------G-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFG 183 (373)
Q Consensus 128 -g~L~va~~~-------------~gl~~~~-~~--------g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~ 183 (373)
+.|||+... ..|.++. .. . .+++.........+....|+++|||.|||+.......
T Consensus 83 n~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~ 162 (463)
T 2wg3_C 83 NGKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMIT 162 (463)
T ss_dssp HCEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCC
T ss_pred CCEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCC
Confidence 789997321 2466665 21 1 2344432222344667789999999999997652110
Q ss_pred c--cccccccccccCCceEEEEeCCCC--------------------eEEEeecCCCCcceEEEccC-----CC-EEEEE
Q 017317 184 L--HNWGLDLLEAKPHGKLLKYDPSLN--------------------ETSILLDSLFFANGVALSKD-----ED-YLVVC 235 (373)
Q Consensus 184 ~--~~~~~~~~~~~~~g~l~~~d~~~~--------------------~~~~~~~~~~~~~gi~~~~d-----g~-~l~v~ 235 (373)
. ....++ .....|.|+|+|++++ +.++++.++++|.|++|+++ |+ ++|.+
T Consensus 163 ~~~~~~~q~--~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~ 240 (463)
T 2wg3_C 163 LDDMEEMDG--LSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCS 240 (463)
T ss_dssp HHHHHHCTT--CCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEE
T ss_pred CCccccccC--cCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEec
Confidence 0 000111 1234689999999863 34677889999999999997 33 56777
Q ss_pred eC
Q 017317 236 ET 237 (373)
Q Consensus 236 ~~ 237 (373)
+.
T Consensus 241 D~ 242 (463)
T 2wg3_C 241 DS 242 (463)
T ss_dssp CC
T ss_pred cc
Confidence 75
No 90
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.32 E-value=8.6e-10 Score=100.80 Aligned_cols=224 Identities=11% Similarity=0.131 Sum_probs=136.2
Q ss_pred eEEeeeecCccccCeEECCCCcEEEEEC-CCcEEEEe-cCC-cEEEeec--cCCccccccceeEEcCC----CcEEEEeC
Q 017317 108 WENWKLIGGDTLLGITTTQENEILVCDA-DKGLLKVT-EEG-VTVLASH--VNGSRINLADDLIAATD----GSIYFSVA 178 (373)
Q Consensus 108 ~~~~~~~~~~p~~gl~~d~~g~L~va~~-~~gl~~~~-~~g-~~~l~~~--~~~~~~~~~~~l~~~~d----G~l~v~~~ 178 (373)
++.++.....|. +|++.++|+|||++. .+.|++++ .+| .+.+... ........+.+|+++|| |.||++.+
T Consensus 24 ~~~va~gL~~P~-~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPW-GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCce-EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 345566677899 999999999999997 55688888 456 5444321 11223456889999984 89999743
Q ss_pred CccccccccccccccccCCceEEEEeCCCC--------eEEEeec-----CCCCcceEEEccCCCEEEEEeC--------
Q 017317 179 STKFGLHNWGLDLLEAKPHGKLLKYDPSLN--------ETSILLD-----SLFFANGVALSKDEDYLVVCET-------- 237 (373)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--------~~~~~~~-----~~~~~~gi~~~~dg~~l~v~~~-------- 237 (373)
. ....+|+|+..+.+ +.+.+.. ..++...|+|++||. |||+..
T Consensus 103 ~---------------~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~ 166 (347)
T 3das_A 103 S---------------ASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLS 166 (347)
T ss_dssp C---------------SSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGT
T ss_pred c---------------CCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccc
Confidence 2 12357888865431 1233322 234566799999996 999842
Q ss_pred -----CCCeEEEEEecCCC-----CcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcch
Q 017317 238 -----FKFRCLKYWLKGES-----KEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPK 307 (373)
Q Consensus 238 -----~~~~i~~~~~~~~~-----~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~ 307 (373)
...+|+|++.++.- ....+++... ...|.++++|++|+||++..+.... .+
T Consensus 167 qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G-~RNp~Gla~dp~G~L~~~d~g~~~~-de----------------- 227 (347)
T 3das_A 167 QDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYG-HRNVQGLAWDDKQRLFASEFGQDTW-DE----------------- 227 (347)
T ss_dssp TCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBC-CSBCCEEEECTTCCEEEEECCSSSC-EE-----------------
T ss_pred cCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeC-CCCcceEEECCCCCEEEEecCCCCC-ce-----------------
Confidence 35789999877631 1123455532 2358999999999999999865310 00
Q ss_pred hhhhccCCCccEEEEEEC---CCC--cEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCCC
Q 017317 308 LIKLVAPLHKKAAVVNVA---ANG--IVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 308 ~~~~~~~~~~~g~v~~~~---~~g--~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~~ 372 (373)
+..+.....+|.-.... ..+ ..+..+. +. ...++.+.+.+|.+|++.+.+.+|.++.+..
T Consensus 228 -ln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~-~~---~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~ 292 (347)
T 3das_A 228 -LNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWS-TD---EASPSGIAYAEGSVWMAGLRGERLWRIPLKG 292 (347)
T ss_dssp -EEEECTTCBCCTTTCCSSCCCTTCCCCSEEEC-TT---TCCEEEEEEETTEEEEEESTTCSEEEEEEET
T ss_pred -eeEEcCCCEecCCcccCCCCCccccCCcEecC-CC---CCCCcceEEEcCceeeccccCCEEEEEEecC
Confidence 00000011111000000 000 0111221 11 1246788888899999999999999998753
No 91
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.32 E-value=1.4e-09 Score=98.85 Aligned_cols=175 Identities=12% Similarity=0.095 Sum_probs=113.6
Q ss_pred CCCEEEE-ecCCeEEEEEc--CCceEEe--eeecCccccCeEECCCCc-EEEEECC-CcEEEEe-c--CC-cEEEeeccC
Q 017317 87 NGVLYTA-TRDGWIKRLHK--NGTWENW--KLIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT-E--EG-VTVLASHVN 155 (373)
Q Consensus 87 ~G~l~v~-~~~g~I~~~~~--~g~~~~~--~~~~~~p~~gl~~d~~g~-L~va~~~-~gl~~~~-~--~g-~~~l~~~~~ 155 (373)
+..+|++ ..++.|..++. +|+.+.. ......+. +++++++|+ ||++... ..+..++ . ++ .+.+.....
T Consensus 4 ~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 82 (343)
T 1ri6_A 4 KQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQ-PMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESAL 82 (343)
T ss_dssp EEEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCC-CEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEC
T ss_pred eEEEEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCc-eEEECCCCCEEEEeecCCCeEEEEEecCCCCceeecccccc
Confidence 3567776 46888988874 3544332 23345688 999999997 8888765 4566655 3 55 554433211
Q ss_pred CccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCe---EEEeecCCCCcceEEEccCCCE
Q 017317 156 GSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE---TSILLDSLFFANGVALSKDEDY 231 (373)
Q Consensus 156 ~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~~~~~~~gi~~~~dg~~ 231 (373)
. ..+..++++++|+ +|++... .+.|..+|.+.+. ..........+.++++++|++.
T Consensus 83 ~---~~~~~~~~s~dg~~l~~~~~~-----------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 142 (343)
T 1ri6_A 83 P---GSLTHISTDHQGQFVFVGSYN-----------------AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRT 142 (343)
T ss_dssp S---SCCSEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSE
T ss_pred C---CCCcEEEEcCCCCEEEEEecC-----------------CCeEEEEECCCCccccccccccCCCCceEEEECCCCCE
Confidence 1 2578999999996 7777642 3567777663232 2223344556889999999999
Q ss_pred EEEEeCCCCeEEEEEecC-CCCccee--EEecCCCCCCCceeECCCCC-EEEEEe
Q 017317 232 LVVCETFKFRCLKYWLKG-ESKEQTE--IFVENLPGGPDNIKLAPDGS-FWIAIL 282 (373)
Q Consensus 232 l~v~~~~~~~i~~~~~~~-~~~~~~~--~~~~~~~g~p~~i~~d~dG~-lwva~~ 282 (373)
+|+++...+.|..|++.. .+..... .........|.+++++++|+ +|++..
T Consensus 143 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~ 197 (343)
T 1ri6_A 143 LWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNE 197 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEET
T ss_pred EEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeC
Confidence 999987788999999865 3222211 22212234677899999997 667653
No 92
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.31 E-value=2.5e-10 Score=100.47 Aligned_cols=195 Identities=12% Similarity=0.123 Sum_probs=131.3
Q ss_pred ccccCeEECCCCcEEEEEC---CCcEEEEe-cCC-c-EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccc
Q 017317 117 DTLLGITTTQENEILVCDA---DKGLLKVT-EEG-V-TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLD 190 (373)
Q Consensus 117 ~p~~gl~~d~~g~L~va~~---~~gl~~~~-~~g-~-~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~ 190 (373)
.+. ||+++++|.||+++. ...|..+| .+| . ..+. .+. ..+..+++++ +++||+++..
T Consensus 22 f~~-Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~--l~~--~~fgeGi~~~-g~~lyv~t~~----------- 84 (266)
T 2iwa_A 22 FTQ-GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK--MDD--SYFGEGLTLL-NEKLYQVVWL----------- 84 (266)
T ss_dssp CEE-EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE--CCT--TCCEEEEEEE-TTEEEEEETT-----------
T ss_pred Ccc-cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe--cCC--CcceEEEEEe-CCEEEEEEec-----------
Confidence 467 999998899999974 24688888 677 3 3222 111 1234567776 4599999864
Q ss_pred cccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC--CCCCCCc
Q 017317 191 LLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDN 268 (373)
Q Consensus 191 ~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~ 268 (373)
.+.++.||+++.+...-.... .+.|..+++||+.+|+++ +.+.|+.+|....+....-..... ....|+.
T Consensus 85 ------~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 85 ------KNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp ------CSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred ------CCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 478999999887654433322 578888999999999998 678999998654322111111111 1124667
Q ss_pred eeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECC-CCcEEEEEeCCCC--------
Q 017317 269 IKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNG-------- 339 (373)
Q Consensus 269 i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g-------- 339 (373)
+.+. +|.+|++.+.. +.|..+|+ +|+++..+.-...
T Consensus 157 le~~-dg~lyvn~~~~----------------------------------~~V~vID~~tg~V~~~I~~~g~~~~~~~~~ 201 (266)
T 2iwa_A 157 LEYI-NGEVWANIWQT----------------------------------DCIARISAKDGTLLGWILLPNLRKKLIDEG 201 (266)
T ss_dssp EEEE-TTEEEEEETTS----------------------------------SEEEEEETTTCCEEEEEECHHHHHHHHHTT
T ss_pred EEEE-CCEEEEecCCC----------------------------------CeEEEEECCCCcEEEEEECCCccccccccc
Confidence 7776 78999988654 25788895 6888888754210
Q ss_pred -ceecceeEEEEe--CCEEEEeeCCCCeEEEeeCC
Q 017317 340 -KVMSFVTSALEF--DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 340 -~~~~~~~~~~~~--~g~L~vgs~~~~~i~~~~l~ 371 (373)
.....+.++..+ +++||+++-..+.|..+++.
T Consensus 202 ~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 202 FRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred ccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 001245677666 36999999999999999874
No 93
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.29 E-value=1.3e-09 Score=98.66 Aligned_cols=223 Identities=12% Similarity=0.012 Sum_probs=141.8
Q ss_pred CcceEEEecCC-CEEEEe-cCCeEEEEE-cCCceEEeeeecC------ccccCeEECCCC-cEEEEE------------C
Q 017317 78 GPEDVCVDRNG-VLYTAT-RDGWIKRLH-KNGTWENWKLIGG------DTLLGITTTQEN-EILVCD------------A 135 (373)
Q Consensus 78 ~P~~ia~d~~G-~l~v~~-~~g~I~~~~-~~g~~~~~~~~~~------~p~~gl~~d~~g-~L~va~------------~ 135 (373)
.|.+++++++| .+|+.. .++.|..++ .+++......... .+. +++++++| .||++. .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF-GAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT-CEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc-ceEECCCCCEEEEEeccccccccccccc
Confidence 48999999988 577655 568999999 4565443222222 678 99999999 578875 2
Q ss_pred CCcEEEEe-cCC-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE
Q 017317 136 DKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (373)
Q Consensus 136 ~~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 212 (373)
...+..++ .++ ....... + ..+.++++++||+ ||+++ +.|+.+|..+++...
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~--~---~~~~~~~~s~dg~~l~~~~--------------------~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA--P---RQITMLAWARDGSKLYGLG--------------------RDLHVMDPEAGTLVE 168 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC--C---SSCCCEEECTTSSCEEEES--------------------SSEEEEETTTTEEEE
T ss_pred CceEEEEECCCCcEEEEEeC--C---CCcceeEECCCCCEEEEeC--------------------CeEEEEECCCCcEee
Confidence 35688888 555 3222111 1 2467899999996 88872 469999998887654
Q ss_pred eecCCCCcceEEEccCCCEEEEEeCCCC-----------------------eEEEEEecCCCCcceeEEecCCCCCCCce
Q 017317 213 LLDSLFFANGVALSKDEDYLVVCETFKF-----------------------RCLKYWLKGESKEQTEIFVENLPGGPDNI 269 (373)
Q Consensus 213 ~~~~~~~~~gi~~~~dg~~l~v~~~~~~-----------------------~i~~~~~~~~~~~~~~~~~~~~~g~p~~i 269 (373)
.......+..+.+++|++.+|++....+ .|..++....+... ..+. .....|.++
T Consensus 169 ~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~-~~~~-~~~~~~~~~ 246 (337)
T 1pby_B 169 DKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM-REVR-IMDVFYFST 246 (337)
T ss_dssp EECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE-EEEE-ECSSCEEEE
T ss_pred eeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceE-eecC-CCCCceeeE
Confidence 4433332345588999988887765444 35677765433221 1111 223456779
Q ss_pred eECCCCC-EEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeE
Q 017317 270 KLAPDGS-FWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTS 347 (373)
Q Consensus 270 ~~d~dG~-lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~ 347 (373)
++++||+ +|++ .+ .+..+|. +++.+..+.... .+..
T Consensus 247 ~~s~dg~~l~~~--~~-----------------------------------~v~~~d~~~~~~~~~~~~~~-----~~~~ 284 (337)
T 1pby_B 247 AVNPAKTRAFGA--YN-----------------------------------VLESFDLEKNASIKRVPLPH-----SYYS 284 (337)
T ss_dssp EECTTSSEEEEE--ES-----------------------------------EEEEEETTTTEEEEEEECSS-----CCCE
T ss_pred EECCCCCEEEEe--CC-----------------------------------eEEEEECCCCcCcceecCCC-----ceee
Confidence 9999997 5655 22 3677775 456666654322 2455
Q ss_pred EEEe-C-CEEEEeeCCCCeEEEeeCC
Q 017317 348 ALEF-D-DHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 348 ~~~~-~-g~L~vgs~~~~~i~~~~l~ 371 (373)
+... + ..||+++. .+.|..+++.
T Consensus 285 ~~~s~dg~~l~~~~~-~~~i~v~d~~ 309 (337)
T 1pby_B 285 VNVSTDGSTVWLGGA-LGDLAAYDAE 309 (337)
T ss_dssp EEECTTSCEEEEESB-SSEEEEEETT
T ss_pred EEECCCCCEEEEEcC-CCcEEEEECc
Confidence 5554 3 46888754 5678888775
No 94
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.28 E-value=5.9e-09 Score=96.53 Aligned_cols=187 Identities=14% Similarity=0.078 Sum_probs=107.5
Q ss_pred CEEEEecC--CeEEEEE---cCCceEEeeee----cCccccCeEECCCCc-EEEEECCCcEEEEe-c-CC-cEEEeeccC
Q 017317 89 VLYTATRD--GWIKRLH---KNGTWENWKLI----GGDTLLGITTTQENE-ILVCDADKGLLKVT-E-EG-VTVLASHVN 155 (373)
Q Consensus 89 ~l~v~~~~--g~I~~~~---~~g~~~~~~~~----~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~-~g-~~~l~~~~~ 155 (373)
.+|+|+.. ++|+.+. .+|+.+.+... ...|. +++++++|+ ||+++.. .+..++ . +| ...+.....
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~-~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPIS-WMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCS-EEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCc-EEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeec
Confidence 57888853 5676654 35665544321 23678 999999997 7888765 677777 4 67 443322211
Q ss_pred CccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEE-Eee----cCCCCcceEEEccCC
Q 017317 156 GSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-ILL----DSLFFANGVALSKDE 229 (373)
Q Consensus 156 ~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~----~~~~~~~gi~~~~dg 229 (373)
+ ..+..++++|||+ +|+...... ....+............+|.++.+ ++.. .+. .....+++++++|||
T Consensus 82 ~---g~~~~~~~spdg~~l~~~~~~~~-~~~~~~~~~~~~~g~v~v~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~spdG 156 (365)
T 1jof_A 82 G---GHPRANDADTNTRAIFLLAAKQP-PYAVYANPFYKFAGYGNVFSVSET-GKLEKNVQNYEYQENTGIHGMVFDPTE 156 (365)
T ss_dssp C---SSGGGGCTTSCCEEEEEEECSST-TCCEEEEEESSSCCEEEEEEECTT-CCEEEEEEEEECCTTCCEEEEEECTTS
T ss_pred C---CCCccEEECCCCCEEEEEEecCC-cceeccceeecCCceEEEEccCCC-CcCcceEeeEEeCCCCcceEEEECCCC
Confidence 1 1266789999997 344322100 000000000000112345555544 3332 221 234578999999999
Q ss_pred CEEEEEeCCCCeEEEEEec-CCCCcceeEEecCC-CCCCCceeECCCCC-EEEEEe
Q 017317 230 DYLVVCETFKFRCLKYWLK-GESKEQTEIFVENL-PGGPDNIKLAPDGS-FWIAIL 282 (373)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~-~~~~~~~~~~~~~~-~g~p~~i~~d~dG~-lwva~~ 282 (373)
+++|+++...+.|..|+++ ..+......+.... ...|.++++++||+ +|++..
T Consensus 157 ~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 157 TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 9999999888899999986 33322111121111 34688999999996 677654
No 95
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.27 E-value=5.1e-09 Score=102.41 Aligned_cols=233 Identities=9% Similarity=-0.053 Sum_probs=149.7
Q ss_pred EEecCCCEEEEe-cCCeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEECCCcEEEEec--CCcEEEeeccCCc
Q 017317 83 CVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVTE--EGVTVLASHVNGS 157 (373)
Q Consensus 83 a~d~~G~l~v~~-~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~~--~g~~~l~~~~~~~ 157 (373)
+++++|.+|+.. .++.|..+| .+++..........++ +++++++|+ ||+++....|..+|. ...+.+.....+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~-~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g- 221 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVH-ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG- 221 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC-
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccc-eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC-
Confidence 477889999665 678899999 5565543333334478 999999995 888887766777774 222322221122
Q ss_pred cccccceeEEcC----CCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC------------CCCc
Q 017317 158 RINLADDLIAAT----DGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS------------LFFA 220 (373)
Q Consensus 158 ~~~~~~~l~~~~----dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~------------~~~~ 220 (373)
..+..++++| ||+ +|+++.. .+.|..+|..+++....... ...+
T Consensus 222 --~~p~~va~sp~~~~dg~~l~v~~~~-----------------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v 282 (543)
T 1nir_A 222 --IEARSVESSKFKGYEDRYTIAGAYW-----------------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV 282 (543)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEEE-----------------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE
T ss_pred --CCcceEEeCCCcCCCCCEEEEEEcc-----------------CCeEEEEeccccccceeecccCcccCccccccCCce
Confidence 3578999999 984 7887632 36788889887765443221 1135
Q ss_pred ceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCE-EEEEecCCCchhhhccCChHHH
Q 017317 221 NGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF-WIAILQLSSPGLEFVHTSKATK 299 (373)
Q Consensus 221 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~l-wva~~~~~~~~~~~~~~~p~~~ 299 (373)
.++.++++++.+|++....+.|..++....+....... .....|.+++++++|++ +++....
T Consensus 283 ~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~spdg~~l~va~~~~--------------- 345 (543)
T 1nir_A 283 AAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGWDSSHRYFMTAANNS--------------- 345 (543)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEECTTSCEEEEEEGGG---------------
T ss_pred EEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceECCCCCEEEEEecCC---------------
Confidence 68999999999999998889999999765432221122 12347889999999984 5555432
Q ss_pred HHHHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeC-CCCeEEEeeCCC
Q 017317 300 HLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSL-NTNFIGKLPLKA 372 (373)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~-~~~~i~~~~l~~ 372 (373)
+.+..+| .+|+.+..+......+......+... ++.+|+.+. ..+.|..++++.
T Consensus 346 -------------------~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 346 -------------------NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp -------------------TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred -------------------CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 1355577 46777777653221111112223222 378998874 567898888753
No 96
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.26 E-value=6.8e-09 Score=96.46 Aligned_cols=168 Identities=15% Similarity=0.210 Sum_probs=115.3
Q ss_pred CEEE-EecCCeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEE-CCCcEEEEe-cCC-cEEEeeccCCcccccc
Q 017317 89 VLYT-ATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCD-ADKGLLKVT-EEG-VTVLASHVNGSRINLA 162 (373)
Q Consensus 89 ~l~v-~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~-~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~ 162 (373)
.+|+ +..++.|..++ .+++..........+. +++++++|+ ||++. ..+.|..++ .++ ....... . ..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~-~----~~v 76 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPM-GAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPA-G----SSP 76 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC-S----SSE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcc-eEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEEC-C----CCc
Confidence 4564 55788999998 4555444333445677 999999997 56665 334577777 566 3222111 1 257
Q ss_pred ceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCCCe
Q 017317 163 DDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFR 241 (373)
Q Consensus 163 ~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~ 241 (373)
.+++++++|+ ||++... .+.|+.+|..+++..........+.+++++++++.+|++....+.
T Consensus 77 ~~~~~spdg~~l~~~~~~-----------------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 139 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMA-----------------SSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKT 139 (391)
T ss_dssp EEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTE
T ss_pred cceEECCCCCEEEEEECC-----------------CCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCE
Confidence 8999999996 7777542 478999999988776655555678899999999999999888899
Q ss_pred EEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEec
Q 017317 242 CLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQ 283 (373)
Q Consensus 242 i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~~ 283 (373)
|+.+++...+. ...+. ....+..++++++|+ +|++...
T Consensus 140 v~~~d~~~~~~--~~~~~--~~~~~~~~~~~~dg~~l~~~~~~ 178 (391)
T 1l0q_A 140 VSVINTVTKAV--INTVS--VGRSPKGIAVTPDGTKVYVANFD 178 (391)
T ss_dssp EEEEETTTTEE--EEEEE--CCSSEEEEEECTTSSEEEEEETT
T ss_pred EEEEECCCCcE--EEEEe--cCCCcceEEECCCCCEEEEEeCC
Confidence 99999754321 11221 234577889999996 5566543
No 97
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.23 E-value=1.5e-09 Score=95.36 Aligned_cols=153 Identities=12% Similarity=0.026 Sum_probs=107.0
Q ss_pred cCCcceEEEecCCCEEEEe-cCCeEEEEEc-CCceEEeeeecCccccCeEECCCC-cEEEEECCCcEEEEe-cCC--cEE
Q 017317 76 LNGPEDVCVDRNGVLYTAT-RDGWIKRLHK-NGTWENWKLIGGDTLLGITTTQEN-EILVCDADKGLLKVT-EEG--VTV 149 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~-~~g~I~~~~~-~g~~~~~~~~~~~p~~gl~~d~~g-~L~va~~~~gl~~~~-~~g--~~~ 149 (373)
-..+++++.+ +++||+.+ .++.+.++|. +++........ .+. |..+.+|| +||+++....+..+| .+. ...
T Consensus 65 ~~fgeGi~~~-g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~-g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~ 141 (266)
T 2iwa_A 65 SYFGEGLTLL-NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKD-GWGLATDGKILYGSDGTSILYEIDPHTFKLIKK 141 (266)
T ss_dssp TCCEEEEEEE-TTEEEEEETTCSEEEEEETTTTEEEEEEECC-SSS-CCEEEECSSSEEEECSSSEEEEECTTTCCEEEE
T ss_pred CcceEEEEEe-CCEEEEEEecCCEEEEEECCCCcEEEEEECC-CCC-eEEEEECCCEEEEECCCCeEEEEECCCCcEEEE
Confidence 3457788888 67999877 5789999994 44433222223 244 44444444 799998656688888 443 333
Q ss_pred EeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec--CC----------
Q 017317 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--SL---------- 217 (373)
Q Consensus 150 l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--~~---------- 217 (373)
+.....+.+...+|.+.+. +|.+|++... .+.|.++|+.++++..... ++
T Consensus 142 I~Vg~~~~p~~~~nele~~-dg~lyvn~~~-----------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 142 HNVKYNGHRVIRLNELEYI-NGEVWANIWQ-----------------TDCIARISAKDGTLLGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCT
T ss_pred EEECCCCcccccceeEEEE-CCEEEEecCC-----------------CCeEEEEECCCCcEEEEEECCCccccccccccc
Confidence 3322334455678888887 8999998753 4689999999998764332 11
Q ss_pred --CCcceEEEccCCCEEEEEeCCCCeEEEEEecC
Q 017317 218 --FFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 218 --~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
..|+||+++++++.+||+....+.++.+++..
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 36799999999999999999889999988653
No 98
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.23 E-value=7.5e-09 Score=97.56 Aligned_cols=250 Identities=14% Similarity=0.126 Sum_probs=158.7
Q ss_pred CcceEEEecCCCEEEE-ecCCeEEEEE-cCCceE-EeeeecCccccCeEECCCCc-EEEEEC-CCcEEEEe-cCC-cEEE
Q 017317 78 GPEDVCVDRNGVLYTA-TRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENE-ILVCDA-DKGLLKVT-EEG-VTVL 150 (373)
Q Consensus 78 ~P~~ia~d~~G~l~v~-~~~g~I~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~-L~va~~-~~gl~~~~-~~g-~~~l 150 (373)
...++++.++|.+|+. ..++.|..++ .+++.. .+......+. +++++++|+ +|++.. .+.+..++ .++ ....
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK-ILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE-EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee-EEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE
Confidence 3456888888998854 4779999999 444433 3332345667 899999886 556664 34577788 566 3221
Q ss_pred eeccCCccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCC
Q 017317 151 ASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDE 229 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg 229 (373)
.. . ...+.+++++++| .+|++...... + ....+.|+.+|..+++..........+.++++++++
T Consensus 250 ~~---~--~~~~~~~~~~~~g~~l~~~~~~~~~--------~--~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g 314 (433)
T 3bws_A 250 TD---K--IGLPRGLLLSKDGKELYIAQFSASN--------Q--ESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTE 314 (433)
T ss_dssp CC---C--CSEEEEEEECTTSSEEEEEEEESCT--------T--CSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSST
T ss_pred ec---C--CCCceEEEEcCCCCEEEEEECCCCc--------c--ccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCC
Confidence 11 1 1247889999999 46666432000 0 012478999998877665444333467889999999
Q ss_pred CEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEecCCCchhhhccCChHHHHHHHhcchh
Q 017317 230 DYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQLSSPGLEFVHTSKATKHLLAAFPKL 308 (373)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 308 (373)
+.+|++....+.+..|++...+. ...+. ....+..++++++|+ +|++..........+
T Consensus 315 ~~l~~~~~~~~~v~v~d~~~~~~--~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~----------------- 373 (433)
T 3bws_A 315 NKIYVSDMCCSKIEVYDLKEKKV--QKSIP--VFDKPNTIALSPDGKYLYVSCRGPNHPTEGY----------------- 373 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTTEE--EEEEE--CSSSEEEEEECTTSSEEEEEECCCCCTTTCT-----------------
T ss_pred CEEEEEecCCCEEEEEECCCCcE--EEEec--CCCCCCeEEEcCCCCEEEEEecCCCcccccc-----------------
Confidence 99999988899999999764321 11221 234577899999997 677765421000000
Q ss_pred hhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeEEEEe-C-CEEEEeeCCCCeEEEeeCCC
Q 017317 309 IKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTSALEF-D-DHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 309 ~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~vgs~~~~~i~~~~l~~ 372 (373)
+..+...|.+..+|. +++.+..+... ..+..+... + ..|++++.....|..+++.+
T Consensus 374 ---~~~g~~dg~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 374 ---LKKGLVLGKVYVIDTTTDTVKEFWEAG-----NQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp ---TSCCSSCCEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ---ccccccceEEEEEECCCCcEEEEecCC-----CCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 001334567888885 57777776542 246677665 3 47888887678898888764
No 99
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.19 E-value=4.7e-09 Score=91.34 Aligned_cols=148 Identities=19% Similarity=0.231 Sum_probs=105.2
Q ss_pred cceEEEecCCCEEEEe-cCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC--cEEEeec
Q 017317 79 PEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLASH 153 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~-~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g--~~~l~~~ 153 (373)
.++++.+ +++||+.+ .++.++++| .+.+...-....+... |++.| .+.||+++....|..+| .+. ...+.-.
T Consensus 89 geGit~~-g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~-glt~d-g~~L~~SdGs~~i~~iDp~T~~v~~~I~V~ 165 (262)
T 3nol_A 89 GEGISDW-KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW-GLTHN-DQYLIMSDGTPVLRFLDPESLTPVRTITVT 165 (262)
T ss_dssp EEEEEEE-TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC-CEEEC-SSCEEECCSSSEEEEECTTTCSEEEEEECE
T ss_pred eeEEEEe-CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce-EEecC-CCEEEEECCCCeEEEEcCCCCeEEEEEEec
Confidence 4778887 67999877 578899999 4555433333345667 88876 35899998666688888 444 3333323
Q ss_pred cCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-------------CCCc
Q 017317 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-------------LFFA 220 (373)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-------------~~~~ 220 (373)
..+.+...+|.+... +|+||+.... ...|.++|++++++....+- ...+
T Consensus 166 ~~g~~~~~lNELe~~-~G~lyan~w~-----------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vl 227 (262)
T 3nol_A 166 AHGEELPELNELEWV-DGEIFANVWQ-----------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVL 227 (262)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCE
T ss_pred cCCccccccceeEEE-CCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEECCcCccccccccCcCCce
Confidence 345566677888776 8999998764 36899999999987654321 2367
Q ss_pred ceEEEccCCCEEEEEeCCCCeEEEEEe
Q 017317 221 NGVALSKDEDYLVVCETFKFRCLKYWL 247 (373)
Q Consensus 221 ~gi~~~~dg~~l~v~~~~~~~i~~~~~ 247 (373)
||||++|+++.|||+.-.=.+++++.+
T Consensus 228 NGIA~dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 228 NGIAWDKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp EEEEEETTTTEEEEEETTCSEEEEEEE
T ss_pred EEEEEcCCCCEEEEECCCCCceEEEEE
Confidence 999999999999999865566776654
No 100
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.18 E-value=9.5e-09 Score=94.65 Aligned_cols=186 Identities=15% Similarity=0.152 Sum_probs=114.7
Q ss_pred CCcceEEEecCCCEEEEe-cCCeEEEEE--cCCceEEe----eee----------cCccccCeEECCCCc-EEEEECCC-
Q 017317 77 NGPEDVCVDRNGVLYTAT-RDGWIKRLH--KNGTWENW----KLI----------GGDTLLGITTTQENE-ILVCDADK- 137 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~-~~g~I~~~~--~~g~~~~~----~~~----------~~~p~~gl~~d~~g~-L~va~~~~- 137 (373)
..|..+++ .+..||++. .++.|..++ .++..... ... ...++ +++++++|+ ||+++...
T Consensus 100 ~~p~~~~~-dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~ 177 (361)
T 3scy_A 100 ADPCYLTT-NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLH-CVRITPDGKYLLADDLGTD 177 (361)
T ss_dssp SCEEEEEE-CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEE-EEEECTTSSEEEEEETTTT
T ss_pred CCcEEEEE-CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcce-EEEECCCCCEEEEEeCCCC
Confidence 56888888 345578776 567888887 34432211 111 11236 799999997 88887643
Q ss_pred cEEEEe-cCC-c----E-EE-e---eccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeC
Q 017317 138 GLLKVT-EEG-V----T-VL-A---SHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDP 205 (373)
Q Consensus 138 gl~~~~-~~g-~----~-~l-~---~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 205 (373)
.+..++ ... . + .. . ..........+..++++|||+ +|+++.. .+.|..++.
T Consensus 178 ~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----------------~~~v~v~~~ 240 (361)
T 3scy_A 178 QIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-----------------GGTVIAFRY 240 (361)
T ss_dssp EEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TCEEEEEEE
T ss_pred EEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----------------CCeEEEEEe
Confidence 355554 211 1 1 10 0 001111224578899999996 7888642 356777776
Q ss_pred CCCeEEEeec------CCCCcceEEEccCCCEEEEEeCC-CCeEEEEEecC--CCCcceeEEecCCCCCCCceeECCCCC
Q 017317 206 SLNETSILLD------SLFFANGVALSKDEDYLVVCETF-KFRCLKYWLKG--ESKEQTEIFVENLPGGPDNIKLAPDGS 276 (373)
Q Consensus 206 ~~~~~~~~~~------~~~~~~gi~~~~dg~~l~v~~~~-~~~i~~~~~~~--~~~~~~~~~~~~~~g~p~~i~~d~dG~ 276 (373)
++++.+.+.. ....+.+++|+|||++||+++.. .+.|..|+++. .+......+. . ...|.++++++||+
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~-~-g~~~~~~~~spdg~ 318 (361)
T 3scy_A 241 ADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQL-T-GIHPRNFIITPNGK 318 (361)
T ss_dssp ETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEE-C-SSCCCEEEECTTSC
T ss_pred cCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEec-C-CCCCceEEECCCCC
Confidence 6666543321 22446799999999999999988 78899998852 2222222222 2 34789999999997
Q ss_pred -EEEEEec
Q 017317 277 -FWIAILQ 283 (373)
Q Consensus 277 -lwva~~~ 283 (373)
||++...
T Consensus 319 ~l~~~~~~ 326 (361)
T 3scy_A 319 YLLVACRD 326 (361)
T ss_dssp EEEEEETT
T ss_pred EEEEEECC
Confidence 6766543
No 101
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.18 E-value=1.7e-09 Score=99.85 Aligned_cols=195 Identities=9% Similarity=0.128 Sum_probs=116.0
Q ss_pred CCcceEEEec----CCCEEEEec--------CCeEEEEEcC---Cc---eEEeee-ec------CccccCeEECCCCcEE
Q 017317 77 NGPEDVCVDR----NGVLYTATR--------DGWIKRLHKN---GT---WENWKL-IG------GDTLLGITTTQENEIL 131 (373)
Q Consensus 77 ~~P~~ia~d~----~G~l~v~~~--------~g~I~~~~~~---g~---~~~~~~-~~------~~p~~gl~~d~~g~L~ 131 (373)
.+|.+|++++ +|.||+... ..+|.+++.+ ++ .+.+.. .+ ..+. +|++++||.||
T Consensus 66 ~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~-~l~~~pdG~Ly 144 (353)
T 2g8s_A 66 GGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGG-RLVFDGKGYLF 144 (353)
T ss_dssp CSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCC-CEEECSSSEEE
T ss_pred CCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCc-cEEECCCCcEE
Confidence 5678999998 699998752 3478888732 22 222211 11 2366 89999999999
Q ss_pred EEECC--------------CcEEEEecCC-c--------------EEEeeccCCccccccceeEEcC-CCcEEEEeCCc-
Q 017317 132 VCDAD--------------KGLLKVTEEG-V--------------TVLASHVNGSRINLADDLIAAT-DGSIYFSVAST- 180 (373)
Q Consensus 132 va~~~--------------~gl~~~~~~g-~--------------~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~- 180 (373)
|+... ..|++++.+| + ++++ ..++.|.+|++++ +|+||+++...
T Consensus 145 v~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a-----~G~rnp~gl~~d~~~g~l~~~d~g~~ 219 (353)
T 2g8s_A 145 IALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWS-----YGIRNPQGMAMNPWSNALWLNEHGPR 219 (353)
T ss_dssp EEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEE-----ECCSEEEEEEEETTTTEEEEEEECSB
T ss_pred EEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEE-----EcCcCccceEEECCCCCEEEEecCCC
Confidence 99643 2588888544 2 1111 1345688999999 79999998642
Q ss_pred ------------cccccccccccccccCCceEEEEeC-----CCCeE--EEeecCCCCcceEEEcc-------CCCEEEE
Q 017317 181 ------------KFGLHNWGLDLLEAKPHGKLLKYDP-----SLNET--SILLDSLFFANGVALSK-------DEDYLVV 234 (373)
Q Consensus 181 ------------~~~~~~~~~~~~~~~~~g~l~~~d~-----~~~~~--~~~~~~~~~~~gi~~~~-------dg~~l~v 234 (373)
+||........ ...+. .+.. ..+.. .........|.|+++.. +| .+|+
T Consensus 220 ~~dei~~i~~G~nyGwp~~~~~~---~~~~~--~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g-~l~v 293 (353)
T 2g8s_A 220 GGDEINIPQKGKNYGWPLATWGI---NYSGF--KIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQ-KLFI 293 (353)
T ss_dssp SCEEEECCCTTCBCCTTTBCSSB---CTTSS--CCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTT-EEEE
T ss_pred CCcEEeEeccCCcCCCCCccCCC---CCCCC--ccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCC-cEEE
Confidence 12211100000 00000 0000 00000 00011223578888874 34 5999
Q ss_pred EeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEec
Q 017317 235 CETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 235 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~ 283 (373)
++...++|.++++++.+....+.+.....+.|.++++++||.||+++..
T Consensus 294 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~ 342 (353)
T 2g8s_A 294 GALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDE 342 (353)
T ss_dssp EETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECS
T ss_pred EEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeC
Confidence 9999999999998754322223343333468999999999999998753
No 102
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.18 E-value=1.2e-08 Score=99.73 Aligned_cols=237 Identities=13% Similarity=0.128 Sum_probs=146.7
Q ss_pred cceEEEecCCC-EEEEecCCeEEEEEc---CCceEEeeeecCccccCeEECC----CCc-EEEEEC-CCcEEEEe-cCC-
Q 017317 79 PEDVCVDRNGV-LYTATRDGWIKRLHK---NGTWENWKLIGGDTLLGITTTQ----ENE-ILVCDA-DKGLLKVT-EEG- 146 (373)
Q Consensus 79 P~~ia~d~~G~-l~v~~~~g~I~~~~~---~g~~~~~~~~~~~p~~gl~~d~----~g~-L~va~~-~~gl~~~~-~~g- 146 (373)
|.+++++++|+ ||+++.++.|..++. +++..........|. ++++++ +|+ ||+++. ...+..+| .++
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~-~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~ 259 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR-SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLE 259 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc-eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccc
Confidence 78899999775 778888899999996 344322223456788 999999 885 788864 35577777 555
Q ss_pred -cEEEeecc---CC---ccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE--eecC
Q 017317 147 -VTVLASHV---NG---SRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI--LLDS 216 (373)
Q Consensus 147 -~~~l~~~~---~~---~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~--~~~~ 216 (373)
++.+.... .+ .+...+.++++++++. +|++.. ..+.|+.+|..+.+... ....
T Consensus 260 ~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~-----------------~~g~i~vvd~~~~~~l~~~~i~~ 322 (543)
T 1nir_A 260 PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK-----------------ETGKVLLVNYKDIDNLTVTSIGA 322 (543)
T ss_dssp EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET-----------------TTTEEEEEECTTSSSCEEEEEEC
T ss_pred cceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC-----------------CCCeEEEEEecCCCcceeEEecc
Confidence 34332210 11 1122567889999874 556543 35789999987543211 2233
Q ss_pred CCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCC-Ccee-ECCC-CCEEEEEecCCCchhhhcc
Q 017317 217 LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGP-DNIK-LAPD-GSFWIAILQLSSPGLEFVH 293 (373)
Q Consensus 217 ~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p-~~i~-~d~d-G~lwva~~~~~~~~~~~~~ 293 (373)
...+.+++|+|||+++|++....+.|..+|....+.. ..+.....-.| .+.. .+++ |.+|++...+.
T Consensus 323 ~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~--~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d-------- 392 (543)
T 1nir_A 323 APFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS--ALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD-------- 392 (543)
T ss_dssp CSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEE--EEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS--------
T ss_pred CcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEE--EeeccCCCCCCCCCcccCCCCCccEEEeccCCC--------
Confidence 4678999999999999999888889999987643221 11111100022 2333 3566 67888765321
Q ss_pred CChHHHHHHHhcchhhhhccCCCccEEEEEEC--CC------CcEEEEEeCCCCceecceeEEEEe--CCEEEEeeC-C-
Q 017317 294 TSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA--AN------GIVIRKFEDPNGKVMSFVTSALEF--DDHLYLGSL-N- 361 (373)
Q Consensus 294 ~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~--~~------g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~vgs~-~- 361 (373)
+.|..++ +. .+.++.+..+.+ .+..+..+ +.+||+++. +
T Consensus 393 -------------------------~~V~v~d~~~~~~~~~~~~~v~~l~~~g~----~~~~v~~~pdg~~l~v~~~~~~ 443 (543)
T 1nir_A 393 -------------------------GSISLIGTDPKNHPQYAWKKVAELQGQGG----GSLFIKTHPKSSHLYVDTTFNP 443 (543)
T ss_dssp -------------------------SEEEEEECCTTTCTTTBTSEEEEEECSCS----CCCCEECCTTCCEEEECCTTCS
T ss_pred -------------------------ceEEEEEeCCCCCchhcCeEEEEEEcCCC----CceEEEcCCCCCcEEEecCCCC
Confidence 1234444 31 678888875432 23334444 358999873 2
Q ss_pred ----CCeEEEeeCCC
Q 017317 362 ----TNFIGKLPLKA 372 (373)
Q Consensus 362 ----~~~i~~~~l~~ 372 (373)
++.|..+++..
T Consensus 444 ~~~~~~~v~v~d~~~ 458 (543)
T 1nir_A 444 DARISQSVAVFDLKN 458 (543)
T ss_dssp SHHHHTCEEEEETTC
T ss_pred CcccCceEEEEECCC
Confidence 34899888763
No 103
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.16 E-value=2.3e-08 Score=94.19 Aligned_cols=229 Identities=15% Similarity=0.065 Sum_probs=148.0
Q ss_pred CCcceEEEecCCCEEEEe-cCCeEEEEE-cCCceEEeee------ecCccccCeEECCCCcEEEEECC-CcEEEEe-cCC
Q 017317 77 NGPEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKL------IGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG 146 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~-~~g~I~~~~-~~g~~~~~~~------~~~~p~~gl~~d~~g~L~va~~~-~gl~~~~-~~g 146 (373)
..|.++++++++.+|++. .++.|..++ .+|+...... ..+... ++++.++|++|++... +.+..++ .++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE-TISIPEHNELWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE-EEEEGGGTEEEEEEGGGTEEEEEETTTC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCcee-EEEEcCCCEEEEEECCCCEEEEEECCCc
Confidence 347789999988888765 567799999 4455443211 122345 7889889999887654 4577777 555
Q ss_pred --cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceE
Q 017317 147 --VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGV 223 (373)
Q Consensus 147 --~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi 223 (373)
...+.. ....+..++++++|. +|++... .+.|+.+|..+++..........+.++
T Consensus 202 ~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~-----------------~~~i~~~d~~~~~~~~~~~~~~~~~~~ 259 (433)
T 3bws_A 202 AYKATVDL-----TGKWSKILLYDPIRDLVYCSNWI-----------------SEDISVIDRKTKLEIRKTDKIGLPRGL 259 (433)
T ss_dssp CEEEEEEC-----SSSSEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTTTEEEEECCCCSEEEEE
T ss_pred eEEEEEcC-----CCCCeeEEEEcCCCCEEEEEecC-----------------CCcEEEEECCCCcEEEEecCCCCceEE
Confidence 333321 123577899999986 5566532 478999999888766555555568899
Q ss_pred EEccCCCEEEEEeC-------CCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEecCCCchhhhccCC
Q 017317 224 ALSKDEDYLVVCET-------FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQLSSPGLEFVHTS 295 (373)
Q Consensus 224 ~~~~dg~~l~v~~~-------~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~~~~~~~~~~~~~~ 295 (373)
+++++++.++++.. .++.|+.|++...+.. ... ...+.+.+++++++|+ +|++....
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~--~~~--~~~~~~~~~~~~~~g~~l~~~~~~~----------- 324 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLI--DTI--GPPGNKRHIVSGNTENKIYVSDMCC----------- 324 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEE--EEE--EEEECEEEEEECSSTTEEEEEETTT-----------
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEE--eec--cCCCCcceEEECCCCCEEEEEecCC-----------
Confidence 99999998888874 3457888987643211 111 1123577899999996 67765432
Q ss_pred hHHHHHHHhcchhhhhccCCCccEEEEEECCC-CcEEEEEeCCCCceecceeEEEEe-C-CEEEEeeCCCC---------
Q 017317 296 KATKHLLAAFPKLIKLVAPLHKKAAVVNVAAN-GIVIRKFEDPNGKVMSFVTSALEF-D-DHLYLGSLNTN--------- 363 (373)
Q Consensus 296 p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-g~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~vgs~~~~--------- 363 (373)
+.+..++.+ ++.+..+... ..+..+... + ..||+++...+
T Consensus 325 -----------------------~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 376 (433)
T 3bws_A 325 -----------------------SKIEVYDLKEKKVQKSIPVF-----DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKK 376 (433)
T ss_dssp -----------------------TEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEECCCCCTTTCTTSC
T ss_pred -----------------------CEEEEEECCCCcEEEEecCC-----CCCCeEEEcCCCCEEEEEecCCCccccccccc
Confidence 235666644 5556555422 235566655 2 36888876543
Q ss_pred -----eEEEeeCC
Q 017317 364 -----FIGKLPLK 371 (373)
Q Consensus 364 -----~i~~~~l~ 371 (373)
.|..+++.
T Consensus 377 g~~dg~v~~~d~~ 389 (433)
T 3bws_A 377 GLVLGKVYVIDTT 389 (433)
T ss_dssp CSSCCEEEEEETT
T ss_pred cccceEEEEEECC
Confidence 67777664
No 104
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.13 E-value=6.5e-09 Score=90.49 Aligned_cols=148 Identities=18% Similarity=0.243 Sum_probs=104.6
Q ss_pred CcceEEEecCCCEEEEe-cCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC--cEEEee
Q 017317 78 GPEDVCVDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLAS 152 (373)
Q Consensus 78 ~P~~ia~d~~G~l~v~~-~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g--~~~l~~ 152 (373)
..++++.+ +++||+.+ .++.++++| .+.+...-....+... |++.| .+.||+++....|..+| .+. ...+.-
T Consensus 97 FgeGit~~-g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw-GLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 97 FAEGLASD-GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW-GLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp CEEEEEEC-SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC-CEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ceeEEEEe-CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee-EEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 34778887 67999877 578899999 4554433223345567 88876 35899998766788888 454 333333
Q ss_pred ccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec--------------CCC
Q 017317 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--------------SLF 218 (373)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--------------~~~ 218 (373)
...+.+...+|.|... +|+||+.... ...|.++|++++++....+ ...
T Consensus 174 ~~~g~~v~~lNeLe~~-dG~lyanvw~-----------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~ 235 (268)
T 3nok_A 174 KLRGQPVELINELECA-NGVIYANIWH-----------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEA 235 (268)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETT-----------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTC
T ss_pred CCCCcccccccccEEe-CCEEEEEECC-----------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCcCC
Confidence 3355566677888876 8999998754 3689999999998765322 123
Q ss_pred CcceEEEccCCCEEEEEeCCCCeEEEEE
Q 017317 219 FANGVALSKDEDYLVVCETFKFRCLKYW 246 (373)
Q Consensus 219 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~ 246 (373)
.+||||++++++.|||+.-.=.+++++.
T Consensus 236 vlNGIA~dp~~~rlfVTGK~Wp~~~ev~ 263 (268)
T 3nok_A 236 VLNGIAVEPGSGRIFMTGKLWPRLFEVR 263 (268)
T ss_dssp CEEEEEECTTTCCEEEEETTCSEEEEEE
T ss_pred ceEEEEEcCCCCEEEEeCCCCCceEEEE
Confidence 6799999999999999976545666554
No 105
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.12 E-value=1.8e-08 Score=86.90 Aligned_cols=150 Identities=15% Similarity=0.122 Sum_probs=106.1
Q ss_pred CcceEEEecCCCEEEEe-cCCeEEEEEc-CCceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC--cEEEee
Q 017317 78 GPEDVCVDRNGVLYTAT-RDGWIKRLHK-NGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLAS 152 (373)
Q Consensus 78 ~P~~ia~d~~G~l~v~~-~~g~I~~~~~-~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g--~~~l~~ 152 (373)
..++++.+ +++||+.+ .++.++++|. +.+...-....+.+. |++.| .++||+++....|..+| .+. ...+..
T Consensus 66 fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw-glt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 66 FGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW-ALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp CEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC-EEEEC-SSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred ceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce-EEeeC-CCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 35778887 68999777 6788999994 454433223345567 77765 35899999777788888 444 333333
Q ss_pred ccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec--------------CCC
Q 017317 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--------------SLF 218 (373)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--------------~~~ 218 (373)
...+.+...+|.|... +|+||+.... ...|.++|+.++++....+ ...
T Consensus 143 ~~~g~~~~~lNeLe~~-~G~lyanvw~-----------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~ 204 (243)
T 3mbr_X 143 TAGGRPLDNLNELEWV-NGELLANVWL-----------------TSRIARIDPASGKVVAWIDLQALVPDADALTDSTND 204 (243)
T ss_dssp EETTEECCCEEEEEEE-TTEEEEEETT-----------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSS
T ss_pred ccCCcccccceeeEEe-CCEEEEEECC-----------------CCeEEEEECCCCCEEEEEECCcCccccccccCCcCC
Confidence 3455666677887765 8999988754 3589999999998765322 123
Q ss_pred CcceEEEccCCCEEEEEeCCCCeEEEEEec
Q 017317 219 FANGVALSKDEDYLVVCETFKFRCLKYWLK 248 (373)
Q Consensus 219 ~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~ 248 (373)
.+||||++++++.|||+.-.=.+++++.+.
T Consensus 205 vlNGIA~d~~~~~lfVTGK~wp~~~~v~~~ 234 (243)
T 3mbr_X 205 VLNGIAFDAEHDRLFVTGKRWPMLYEIRLT 234 (243)
T ss_dssp CEEEEEEETTTTEEEEEETTCSEEEEEEEC
T ss_pred ceEEEEEcCCCCEEEEECCCCCcEEEEEEe
Confidence 679999999999999997655667766543
No 106
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.12 E-value=4e-08 Score=89.39 Aligned_cols=192 Identities=15% Similarity=0.073 Sum_probs=106.8
Q ss_pred CcceEEEecCCC-EEEEe-cCCeEEEEEc-CCceEEeeeecC-------ccccCeEECCCCc-EEEEECC----------
Q 017317 78 GPEDVCVDRNGV-LYTAT-RDGWIKRLHK-NGTWENWKLIGG-------DTLLGITTTQENE-ILVCDAD---------- 136 (373)
Q Consensus 78 ~P~~ia~d~~G~-l~v~~-~~g~I~~~~~-~g~~~~~~~~~~-------~p~~gl~~d~~g~-L~va~~~---------- 136 (373)
.|.+++++++|+ +|+.. .++.|+.++. +++......... .+. +++++++|+ ||++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMY-SFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSS-CEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccccc-ceEECCCCCEEEEEccccccccccccc
Confidence 689999999886 77665 6789999994 455433222222 267 999999995 6776532
Q ss_pred --CcEEEEe-cCC-c-EEEeeccCCccccccceeEEcCCCcEEEEeCCcc-ccccccc-ccccc-cc-------------
Q 017317 137 --KGLLKVT-EEG-V-TVLASHVNGSRINLADDLIAATDGSIYFSVASTK-FGLHNWG-LDLLE-AK------------- 195 (373)
Q Consensus 137 --~gl~~~~-~~g-~-~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~-~~~~~~~-~~~~~-~~------------- 195 (373)
..+..++ .++ . +.+.. ... ...+.++++++||++|+++..-. +...... ...+. ..
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~-~~~--~~~~~~~~~s~dg~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRT-FPM--PRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEE-EEC--CSSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred CCCeEEEEECCCccccceeee-ccC--CCcccceeECCCCcEEEccCcEEEEeCCCCceeccccccccCCccccCcccee
Confidence 5677787 554 2 11111 111 12467888999999888532100 0000000 00000 00
Q ss_pred -------------------------------CCceEEEEeCCCCeEEEee--cCCCCcceEEEcc-CCCEEEEEeCCCCe
Q 017317 196 -------------------------------PHGKLLKYDPSLNETSILL--DSLFFANGVALSK-DEDYLVVCETFKFR 241 (373)
Q Consensus 196 -------------------------------~~g~l~~~d~~~~~~~~~~--~~~~~~~gi~~~~-dg~~l~v~~~~~~~ 241 (373)
....++.+|..+++...+. .....+.++++++ |++.+|++ .+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~---~~~ 276 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV---LNR 276 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE---ESE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE---cCe
Confidence 0001112333333332211 1122456788889 99988888 568
Q ss_pred EEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEE
Q 017317 242 CLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIA 280 (373)
Q Consensus 242 i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva 280 (373)
|++|++...+. ...+ .....|.+++++++|+ ||++
T Consensus 277 v~~~d~~~~~~--~~~~--~~~~~~~~~~~s~dg~~l~~~ 312 (349)
T 1jmx_B 277 LAKYDLKQRKL--IKAA--NLDHTYYCVAFDKKGDKLYLG 312 (349)
T ss_dssp EEEEETTTTEE--EEEE--ECSSCCCEEEECSSSSCEEEE
T ss_pred EEEEECccCeE--EEEE--cCCCCccceEECCCCCEEEEe
Confidence 99999754321 1122 1234588899999985 7775
No 107
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.09 E-value=1.1e-07 Score=83.00 Aligned_cols=198 Identities=12% Similarity=0.127 Sum_probs=126.6
Q ss_pred CccccCeEECCC-CcEEEE-ECCCcEEEEecCC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCcccccccccccc
Q 017317 116 GDTLLGITTTQE-NEILVC-DADKGLLKVTEEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDL 191 (373)
Q Consensus 116 ~~p~~gl~~d~~-g~L~va-~~~~gl~~~~~~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~ 191 (373)
..+. ||+++++ +.||++ +....|++++.+| .+.+. ..+ ...+.+|+++++|.+|+++..
T Consensus 27 ~~lS-Gla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~--l~g--~~D~EGIa~~~~g~~~vs~E~------------ 89 (255)
T 3qqz_A 27 NNIS-SLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIP--LDF--VKDLETIEYIGDNQFVISDER------------ 89 (255)
T ss_dssp SCEE-EEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEE--CSS--CSSEEEEEECSTTEEEEEETT------------
T ss_pred cCcc-eeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEe--cCC--CCChHHeEEeCCCEEEEEECC------------
Confidence 4566 9999975 469975 5555699999547 33331 122 245778999999999998643
Q ss_pred ccccCCceEEEEeCCC-CeE---EEeecCC------CCcceEEEccCCCEEEEEeCCCC-eEEEEEecCC-CCcceeEEe
Q 017317 192 LEAKPHGKLLKYDPSL-NET---SILLDSL------FFANGVALSKDEDYLVVCETFKF-RCLKYWLKGE-SKEQTEIFV 259 (373)
Q Consensus 192 ~~~~~~g~l~~~d~~~-~~~---~~~~~~~------~~~~gi~~~~dg~~l~v~~~~~~-~i~~~~~~~~-~~~~~~~~~ 259 (373)
.++++.++... +.. ....-.+ ....|++++++++.||++..... +|+.++ +- .........
T Consensus 90 -----~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~ 162 (255)
T 3qqz_A 90 -----DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISK 162 (255)
T ss_dssp -----TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEE
T ss_pred -----CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeec
Confidence 35666664322 221 1111111 12379999999988999876554 777776 31 111122211
Q ss_pred c-----C-CCCCCCceeECC-CCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEE
Q 017317 260 E-----N-LPGGPDNIKLAP-DGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIR 332 (373)
Q Consensus 260 ~-----~-~~g~p~~i~~d~-dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~ 332 (373)
. . .-.-+.++++|+ .|++|+....++ .++.+|.+|+++.
T Consensus 163 ~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~----------------------------------~L~~~d~~g~~~~ 208 (255)
T 3qqz_A 163 DKALQRQFTLDDVSGAEFNQQKNTLLVLSHESR----------------------------------ALQEVTLVGEVIG 208 (255)
T ss_dssp CHHHHHTCCSSCCCEEEEETTTTEEEEEETTTT----------------------------------EEEEECTTCCEEE
T ss_pred chhhccccccCCceeEEEcCCCCeEEEEECCCC----------------------------------eEEEEcCCCCEEE
Confidence 0 1 112368899987 567888876552 6899999999888
Q ss_pred EEeCCCCc-----eecceeEEEEe-CCEEEEeeCCCCeEEEeeCCC
Q 017317 333 KFEDPNGK-----VMSFVTSALEF-DDHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 333 ~~~~~~g~-----~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~~ 372 (373)
.+.-..|. .+....+++.+ +|+|||.+- .|.+++++-.+
T Consensus 209 ~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE-~n~~y~f~~~~ 253 (255)
T 3qqz_A 209 EMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE-PNRFYRFTPQS 253 (255)
T ss_dssp EEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET-TTEEEEEEC--
T ss_pred EEEcCCccCCcccccCCCCeeEECCCCCEEEEcC-CceEEEEEecC
Confidence 87665442 24567888877 589999984 68999987654
No 108
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.05 E-value=4.4e-08 Score=88.53 Aligned_cols=177 Identities=10% Similarity=0.036 Sum_probs=107.2
Q ss_pred EEEEecCCeEEEEE-cCCceEEeeeecC---ccccCeEECCCC-cEEEEECC-CcEEEEe-cCC-c-EEEeeccCCcccc
Q 017317 90 LYTATRDGWIKRLH-KNGTWENWKLIGG---DTLLGITTTQEN-EILVCDAD-KGLLKVT-EEG-V-TVLASHVNGSRIN 160 (373)
Q Consensus 90 l~v~~~~g~I~~~~-~~g~~~~~~~~~~---~p~~gl~~d~~g-~L~va~~~-~gl~~~~-~~g-~-~~l~~~~~~~~~~ 160 (373)
++++..++.|..++ .+++......... .|. +++++++| .+|++... ..|..++ .++ . ..+.....+....
T Consensus 4 ~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 4 ILAPARPDKLVVIDTEKMAVDKVITIADAGPTPM-VPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp EEEEETTTEEEEEETTTTEEEEEEECTTCTTCCC-CEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred EEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCcc-ceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 44666788999999 4555443333344 688 99999999 47887654 4578888 566 3 2232111111112
Q ss_pred ccceeEEcCCC-cEEEEeCCccccccccccccccc-cCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCC
Q 017317 161 LADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEA-KPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETF 238 (373)
Q Consensus 161 ~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~-~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~ 238 (373)
.+.++++++|| .+|+++....... .+. ...+.|+.+|.++++..........+.++++++||+.+|++
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~-------~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--- 152 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLEL-------THFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--- 152 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECS-------SCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE---
T ss_pred cccceEECCCCCEEEEEeccccccc-------ccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe---
Confidence 57789999999 6888752100000 000 02378999999887765544445668899999999989998
Q ss_pred CCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEE
Q 017317 239 KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAI 281 (373)
Q Consensus 239 ~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~ 281 (373)
++.|+.+++.+.+. ...+. ....+..+.++++|. +|++.
T Consensus 153 ~~~i~~~d~~~~~~--~~~~~--~~~~~~~~~~s~dg~~l~~~~ 192 (337)
T 1pby_B 153 GRDLHVMDPEAGTL--VEDKP--IQSWEAETYAQPDVLAVWNQH 192 (337)
T ss_dssp SSSEEEEETTTTEE--EEEEC--STTTTTTTBCCCBCCCCCCCC
T ss_pred CCeEEEEECCCCcE--eeeee--ccccCCCceeCCCccEEeeec
Confidence 35699998754321 11111 112123446677775 55543
No 109
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.04 E-value=1.5e-07 Score=92.32 Aligned_cols=187 Identities=14% Similarity=0.121 Sum_probs=117.9
Q ss_pred CCcceEEEecCCC-EEEEecCCeEEEEEc---CCceEEeeeecCccccCeEEC----CCCc-EEEEECC-CcEEEEe-cC
Q 017317 77 NGPEDVCVDRNGV-LYTATRDGWIKRLHK---NGTWENWKLIGGDTLLGITTT----QENE-ILVCDAD-KGLLKVT-EE 145 (373)
Q Consensus 77 ~~P~~ia~d~~G~-l~v~~~~g~I~~~~~---~g~~~~~~~~~~~p~~gl~~d----~~g~-L~va~~~-~gl~~~~-~~ 145 (373)
..|.+++++++|+ +|+++.++.|..+|. +++.......+..|. +++++ +||+ +||++.. ..+..+| .+
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~-~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t 275 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR-SIETSKMEGWEDKYAIAGAYWPPQYVIMDGET 275 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEETTEEEEEETTT
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc-eeEEccccCCCCCEEEEEEccCCeEEEEECCC
Confidence 4688999999875 788888999999995 444433333456788 99999 5884 8888654 4567777 44
Q ss_pred C--cEEEeecc---CC---ccccccceeEEcCCCcE-EEEeCCccccccccccccccccCCceEEEEeCCCCeEEE--ee
Q 017317 146 G--VTVLASHV---NG---SRINLADDLIAATDGSI-YFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI--LL 214 (373)
Q Consensus 146 g--~~~l~~~~---~~---~~~~~~~~l~~~~dG~l-~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~--~~ 214 (373)
. ++.+.... .+ .+...+.++...+++.. +++.. ..|.|+.+|..+.+... ..
T Consensus 276 ~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~-----------------~~g~v~~vd~~~~~~~~v~~i 338 (567)
T 1qks_A 276 LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK-----------------ETGKILLVDYTDLNNLKTTEI 338 (567)
T ss_dssp CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET-----------------TTTEEEEEETTCSSEEEEEEE
T ss_pred CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEec-----------------CCCeEEEEecCCCccceeeee
Confidence 4 33332211 11 01123456777777654 44432 35899999976543211 12
Q ss_pred cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEe-cCCCCCC-Ccee-ECCC-CCEEEEEec
Q 017317 215 DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFV-ENLPGGP-DNIK-LAPD-GSFWIAILQ 283 (373)
Q Consensus 215 ~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~g~p-~~i~-~d~d-G~lwva~~~ 283 (373)
....++.++.|++||+++|++....+.|..+|....+.... .-. ...+ .| .+.. ++++ |.+|++...
T Consensus 339 ~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~-i~vgg~~P-hpg~g~~~~~p~~g~v~~t~~~ 409 (567)
T 1qks_A 339 SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAI-EDTGGQTP-HPGRGANFVHPTFGPVWATSHM 409 (567)
T ss_dssp ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEE-EECSSSSB-CCTTCEEEEETTTEEEEEEEBS
T ss_pred eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEE-EeccCcCC-CCccceeeECCCCCcEEEeCCC
Confidence 33457889999999999999998899999999764332111 111 1111 22 3444 4676 679987653
No 110
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.04 E-value=7.1e-09 Score=98.85 Aligned_cols=170 Identities=15% Similarity=0.120 Sum_probs=107.7
Q ss_pred ceEEeeeecCccccCeEECCCCcEEEEECCCc-EEEEe-cCC-cEEEeeccCC----ccccccceeEEcC----CCcEEE
Q 017317 107 TWENWKLIGGDTLLGITTTQENEILVCDADKG-LLKVT-EEG-VTVLASHVNG----SRINLADDLIAAT----DGSIYF 175 (373)
Q Consensus 107 ~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~g-l~~~~-~~g-~~~l~~~~~~----~~~~~~~~l~~~~----dG~l~v 175 (373)
+++.++.....|. +|+++++|+|||++...+ |++++ .+| .+.+...... .....+.+|+++| +|.|||
T Consensus 18 ~~~~~a~~l~~P~-~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv 96 (454)
T 1cru_A 18 DKKVILSNLNKPH-ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYI 96 (454)
T ss_dssp CEEEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEE
T ss_pred EEEEEECCCCCce-EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEE
Confidence 4556666667899 999999999999998754 88888 457 5544332111 1234567999999 689999
Q ss_pred EeCCccccccccccccccccCCceEEEEeCCCC--e---EEEeec-----CCCCcceEEEccCCCEEEEEeCC-------
Q 017317 176 SVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--E---TSILLD-----SLFFANGVALSKDEDYLVVCETF------- 238 (373)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--~---~~~~~~-----~~~~~~gi~~~~dg~~l~v~~~~------- 238 (373)
+.+...-+.. . .......+|+|++.+.+ + .+.+.. ..+.+++|+|++||. ||++...
T Consensus 97 ~~s~~~~~~~----~-~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~Gd~~~~~~~ 170 (454)
T 1cru_A 97 SGTFKNPKST----D-KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIGDQGRNQLA 170 (454)
T ss_dssp EEEEECTTC-------CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEECCTTTTSGG
T ss_pred EEeccccCCC----c-cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEECCCCCCCcc
Confidence 9742000000 0 00001247888864321 2 223322 245678999999997 9998532
Q ss_pred -------------------------CCeEEEEEecCCCC-c-------ceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 239 -------------------------KFRCLKYWLKGESK-E-------QTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 239 -------------------------~~~i~~~~~~~~~~-~-------~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
..+|+|++.+|.-. . ..+++... ...|.++++|++|+||++..+.
T Consensus 171 ~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G-~RNp~gla~dp~G~L~~~d~g~ 248 (454)
T 1cru_A 171 YLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLG-HRNPQGLAFTPNGKLLQSEQGP 248 (454)
T ss_dssp GTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBC-CSEEEEEEECTTSCEEEEEECS
T ss_pred ccccccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEEC-CCCcceEEECCCCCEEEEecCC
Confidence 35799998765310 0 23445422 2358899999999999999864
No 111
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=99.01 E-value=4.8e-07 Score=83.29 Aligned_cols=229 Identities=10% Similarity=0.037 Sum_probs=145.6
Q ss_pred CCcceEEEe-cCCCEEEEec---C---CeEEEEEc---------CCce-EEeee--ec---CccccCeEECCCCcEEEEE
Q 017317 77 NGPEDVCVD-RNGVLYTATR---D---GWIKRLHK---------NGTW-ENWKL--IG---GDTLLGITTTQENEILVCD 134 (373)
Q Consensus 77 ~~P~~ia~d-~~G~l~v~~~---~---g~I~~~~~---------~g~~-~~~~~--~~---~~p~~gl~~d~~g~L~va~ 134 (373)
.-|.++++| .+|++|++.. . -.+..++. ++.. +.+.. .+ -.+. ++.+|+.|+|||.|
T Consensus 26 ~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~-~v~iD~~~rLWVLD 104 (381)
T 3q6k_A 26 MISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIY-QPVIDDCRRLWVVD 104 (381)
T ss_dssp CCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEE-EEEECTTCEEEEEE
T ss_pred cceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEee-EEEEcCCCcEEEEe
Confidence 348889995 7999999872 2 24455552 2244 55433 12 2345 88899999999998
Q ss_pred CCC----------------cEEEEe-c-C--C-cEEEe-eccCCccccccceeEEc-C-------CCcEEEEeCCccccc
Q 017317 135 ADK----------------GLLKVT-E-E--G-VTVLA-SHVNGSRINLADDLIAA-T-------DGSIYFSVASTKFGL 184 (373)
Q Consensus 135 ~~~----------------gl~~~~-~-~--g-~~~l~-~~~~~~~~~~~~~l~~~-~-------dG~l~v~~~~~~~~~ 184 (373)
.+. .|+.+| . + . ++.+. ....-.+..+.++|++| . ++.+|++|..
T Consensus 105 tG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~----- 179 (381)
T 3q6k_A 105 IGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL----- 179 (381)
T ss_dssp CSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT-----
T ss_pred CCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC-----
Confidence 641 267777 4 3 3 22221 11111223567899999 2 4579999974
Q ss_pred cccccccccccCCceEEEEeCCCCeEEEeecC-------------------CCCcceEEEccC----CCEEEEEeCCCCe
Q 017317 185 HNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-------------------LFFANGVALSKD----EDYLVVCETFKFR 241 (373)
Q Consensus 185 ~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-------------------~~~~~gi~~~~d----g~~l~v~~~~~~~ 241 (373)
..+|+.||..+++...+.+. .....||+++|+ ++.||+.-....+
T Consensus 180 ------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ 247 (381)
T 3q6k_A 180 ------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIK 247 (381)
T ss_dssp ------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSE
T ss_pred ------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCc
Confidence 35788888776665444321 013468999998 8899999988889
Q ss_pred EEEEEe---cCCC-CcceeEEecCCCCCCC--ceeEC-CCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccC
Q 017317 242 CLKYWL---KGES-KEQTEIFVENLPGGPD--NIKLA-PDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAP 314 (373)
Q Consensus 242 i~~~~~---~~~~-~~~~~~~~~~~~g~p~--~i~~d-~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 314 (373)
+++... ..+. ...++.+.+ .....+ ++++| .+|+||++....
T Consensus 248 ly~V~T~~L~~~~~~~~v~~~G~-kg~~s~~~~~~~D~~~G~ly~~~~~~------------------------------ 296 (381)
T 3q6k_A 248 VYSVNTKELKQKGGKLNPELLGN-RGKYNDAIALAYDPKTKVIFFAEANT------------------------------ 296 (381)
T ss_dssp EEEEEHHHHSSTTCCCCCEEEEE-CCTTCCEEEEEECTTTCEEEEEESSS------------------------------
T ss_pred EEEEEHHHhhCcchhhceEEeee-cCCCCCcceEEEeCCCCeEEEEeccC------------------------------
Confidence 998863 2222 233333332 211234 45776 899999998764
Q ss_pred CCccEEEEEECCCC------cEEEEEeCCCCceecceeEEEEe-CCEEEEeeCC
Q 017317 315 LHKKAAVVNVAANG------IVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLN 361 (373)
Q Consensus 315 ~~~~g~v~~~~~~g------~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~ 361 (373)
..|.++++++ ......+++ . +.++..+..+ +|+||+-+..
T Consensus 297 ----~aI~~w~~~~~~~~~~n~~~l~~d~-~--l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 297 ----KQVSCWNTQKMPLRMKNTDVVYTSS-R--FVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp ----SEEEEEETTSCSBCGGGEEEEEECT-T--CCSEEEEEECTTSCEEEEECS
T ss_pred ----CeEEEEeCCCCccccCceEEEEECC-C--ccccCeEEECCCCeEEEEECc
Confidence 2478888887 234445665 2 5688888875 6899998854
No 112
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.00 E-value=3.9e-07 Score=89.24 Aligned_cols=229 Identities=10% Similarity=-0.029 Sum_probs=143.5
Q ss_pred EecCCCEEEEe-cCCeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEECCCcEEEEe-c--CCcEEEeeccCCc
Q 017317 84 VDRNGVLYTAT-RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-E--EGVTVLASHVNGS 157 (373)
Q Consensus 84 ~d~~G~l~v~~-~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~--~g~~~l~~~~~~~ 157 (373)
.|+++.+|+.. .++.|..+| .+++..........|+ ++++++||+ +|+++....+..+| . ++ +.+.....|
T Consensus 163 ~d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~-~v~~SpDGr~lyv~~~dg~V~viD~~~~t~-~~v~~i~~G- 239 (567)
T 1qks_A 163 WDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVH-ISRLSASGRYLFVIGRDGKVNMIDLWMKEP-TTVAEIKIG- 239 (567)
T ss_dssp CCGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSCEEEEEETTSEEEEEETTSSSC-CEEEEEECC-
T ss_pred cCCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCcc-ceEECCCCCEEEEEcCCCeEEEEECCCCCC-cEeEEEecC-
Confidence 45566788766 678999999 4555544334456788 999999996 89988766788888 4 33 222222222
Q ss_pred cccccceeEEc----CCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC------------CCCc
Q 017317 158 RINLADDLIAA----TDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS------------LFFA 220 (373)
Q Consensus 158 ~~~~~~~l~~~----~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~------------~~~~ 220 (373)
..|..++++ ||| .+|+++.. .+.+..+|..+.+......- ....
T Consensus 240 --~~P~~ia~s~~~~pDGk~l~v~n~~-----------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rv 300 (567)
T 1qks_A 240 --SEARSIETSKMEGWEDKYAIAGAYW-----------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRV 300 (567)
T ss_dssp --SEEEEEEECCSTTCTTTEEEEEEEE-----------------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCE
T ss_pred --CCCceeEEccccCCCCCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEeccccccccccccCCCce
Confidence 357899999 699 58888643 46788899887765432211 0123
Q ss_pred ceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCE-EEEEecCCCchhhhccCChHHH
Q 017317 221 NGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF-WIAILQLSSPGLEFVHTSKATK 299 (373)
Q Consensus 221 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~l-wva~~~~~~~~~~~~~~~p~~~ 299 (373)
.++..++++..++++....+.|..++....+....... ....++.++.+|++|++ |++....
T Consensus 301 a~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i--~~~~~~~d~~~~pdgr~~~va~~~s--------------- 363 (567)
T 1qks_A 301 AAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI--SAERFLHDGGLDGSHRYFITAANAR--------------- 363 (567)
T ss_dssp EEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE--ECCSSEEEEEECTTSCEEEEEEGGG---------------
T ss_pred EEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee--eccccccCceECCCCCEEEEEeCCC---------------
Confidence 46788888887888877778999998654321111111 12336778899999985 5665443
Q ss_pred HHHHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeE--EEEe-CCEEEEee-CCCCeEEEeeCC
Q 017317 300 HLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTS--ALEF-DDHLYLGS-LNTNFIGKLPLK 371 (373)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~--~~~~-~g~L~vgs-~~~~~i~~~~l~ 371 (373)
+.+..+| .+++++..+.. .|..-+.... +... .+.+|+.+ +..+.|..++.+
T Consensus 364 -------------------n~V~ViD~~t~kl~~~i~v-gg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~ 420 (567)
T 1qks_A 364 -------------------NKLVVIDTKEGKLVAIEDT-GGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTD 420 (567)
T ss_dssp -------------------TEEEEEETTTTEEEEEEEC-SSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECC
T ss_pred -------------------CeEEEEECCCCcEEEEEec-cCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCC
Confidence 1356677 45666665543 0221111112 2222 36899866 455889998865
No 113
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.98 E-value=1.4e-07 Score=82.14 Aligned_cols=155 Identities=13% Similarity=0.106 Sum_probs=107.1
Q ss_pred cccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC--CCCcceEEEccCCCEEEEEeC
Q 017317 160 NLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVALSKDEDYLVVCET 237 (373)
Q Consensus 160 ~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~~gi~~~~dg~~l~v~~~ 237 (373)
.+..+|.++ +|.||++++. .....|.++|++++++.....- -.+..|+++ +++.||+++.
T Consensus 43 ~ftqGL~~~-~~~LyestG~---------------~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw 104 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGL---------------NGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTW 104 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEE---------------TTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEES
T ss_pred cccceEEEE-CCEEEEECCC---------------CCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEe
Confidence 356789998 7899999754 1234799999999987654332 233355555 5678999998
Q ss_pred CCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCc
Q 017317 238 FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHK 317 (373)
Q Consensus 238 ~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 317 (373)
.++.+++||.+..+ ....+. .++...+++.| .++||++....
T Consensus 105 ~~~~v~v~D~~t~~--~~~ti~--~~~eG~glt~d-g~~L~~SdGs~--------------------------------- 146 (262)
T 3nol_A 105 KNGLGFVWNIRNLR--QVRSFN--YDGEGWGLTHN-DQYLIMSDGTP--------------------------------- 146 (262)
T ss_dssp SSSEEEEEETTTCC--EEEEEE--CSSCCCCEEEC-SSCEEECCSSS---------------------------------
T ss_pred eCCEEEEEECccCc--EEEEEE--CCCCceEEecC-CCEEEEECCCC---------------------------------
Confidence 89999999965432 222332 23345667755 24788886422
Q ss_pred cEEEEEECCC-CcEEEEEeCC-CCceecceeEEEEeCCEEEEeeCCCCeEEEeeCCC
Q 017317 318 KAAVVNVAAN-GIVIRKFEDP-NGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 318 ~g~v~~~~~~-g~~~~~~~~~-~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~~ 372 (373)
.+..+|++ .+++..+... +|..+..+..+...+|+||+..+.++.|.++++..
T Consensus 147 --~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~t 201 (262)
T 3nol_A 147 --VLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVWQTNKIVRIDPET 201 (262)
T ss_dssp --EEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEETTSSEEEEECTTT
T ss_pred --eEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEccCCeEEEEECCC
Confidence 47889975 6777777653 34545555566667899999999999999999864
No 114
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.98 E-value=2.9e-06 Score=76.10 Aligned_cols=183 Identities=16% Similarity=0.164 Sum_probs=113.9
Q ss_pred CCcCCcceEEEecCCCEE-EEecCCeEEEEE-cCCceEEeee-ecCccccCeEECCCCcEEEE-ECCCcEEEEe-cCC--
Q 017317 74 GILNGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG-- 146 (373)
Q Consensus 74 g~~~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~g-- 146 (373)
|.-....++++.++|.+. +++.+|.|..++ .+++...... ...... .+++.++|+++++ ...+.+..++ .++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-DVAWSSDSNLLVSASDDKTLKIWDVSSGKC 99 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceE-EEEEcCCCCEEEEECCCCEEEEEECCCCcE
Confidence 434556789999988765 677889999998 4565443322 233445 8899999976654 4444466667 555
Q ss_pred cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcceEEE
Q 017317 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVAL 225 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~gi~~ 225 (373)
...+... ...+..+++.+++.+.++.+. .+.|..+|..+++....... ......+++
T Consensus 100 ~~~~~~~-----~~~v~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 100 LKTLKGH-----SNYVFCCNFNPQSNLIVSGSF-----------------DESVRIWDVKTGKCLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp EEEEECC-----SSCEEEEEECSSSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEEcCC-----CCCEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCEEEEEecCCCCcEEEEEE
Confidence 3333211 134678899999987776442 46788899877765443333 233467899
Q ss_pred ccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 226 SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 226 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
+++++.++.+ ..++.|..|++.... ....+..........++++++|++.++..
T Consensus 158 ~~~~~~l~~~-~~d~~i~~wd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 211 (312)
T 4ery_A 158 NRDGSLIVSS-SYDGLCRIWDTASGQ--CLKTLIDDDNPPVSFVKFSPNGKYILAAT 211 (312)
T ss_dssp CTTSSEEEEE-ETTSCEEEEETTTCC--EEEEECCSSCCCEEEEEECTTSSEEEEEE
T ss_pred cCCCCEEEEE-eCCCcEEEEECCCCc--eeeEEeccCCCceEEEEECCCCCEEEEEc
Confidence 9999955554 456678888865432 11222211112234578899998666544
No 115
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.97 E-value=1.7e-07 Score=88.15 Aligned_cols=236 Identities=13% Similarity=-0.025 Sum_probs=127.8
Q ss_pred CCEEEEecC-----CeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEEC----------CCcEEEEe-cCC--c
Q 017317 88 GVLYTATRD-----GWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDA----------DKGLLKVT-EEG--V 147 (373)
Q Consensus 88 G~l~v~~~~-----g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~----------~~gl~~~~-~~g--~ 147 (373)
.++|+.+.. +.|.++| .++++......+..| ++++++||+ |||++. .+.|..+| .++ .
T Consensus 85 ~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv 162 (426)
T 3c75_H 85 RRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPI 162 (426)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEE
T ss_pred CEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEE
Confidence 468987753 6899999 455544333344455 899999995 999973 23477788 555 3
Q ss_pred EEEeec-cCC-ccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC----CCCc
Q 017317 148 TVLASH-VNG-SRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS----LFFA 220 (373)
Q Consensus 148 ~~l~~~-~~~-~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~----~~~~ 220 (373)
..+... ... .....|..+++++|| .+||++.. ..+.|..+|..++++.....- ...|
T Consensus 163 ~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----------------~~~~VsVID~~t~kvv~~I~v~g~~~~~p 226 (426)
T 3c75_H 163 ADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----------------PAPAVGVVDLEGKTFDRMLDVPDCYHIFP 226 (426)
T ss_dssp EEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEEEEEE
T ss_pred EEEECCCccccccCCCcceEEEcCCCCEEEEEecC----------------CCCeEEEEECCCCeEEEEEEcCCceeecc
Confidence 333211 000 012468899999999 69998642 124555556555443221110 0011
Q ss_pred c-----------------------------------------eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEe
Q 017317 221 N-----------------------------------------GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFV 259 (373)
Q Consensus 221 ~-----------------------------------------gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~ 259 (373)
. .+.++++++.+|+... .+.++.++..+........+.
T Consensus 227 ~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~-~g~V~ViD~~~~~~~v~~~~~ 305 (426)
T 3c75_H 227 ASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTY-TGKIFQADLTAEGATFRAPIE 305 (426)
T ss_dssp EETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBT-TSEEEEEEECSSCEEECCCEE
T ss_pred CCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeC-CCcEEEEeccCCceEEeeeee
Confidence 1 1234555555555543 345666665432211000000
Q ss_pred ---c---CCCCCCCc---eeECCCC-CEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC-CCC
Q 017317 260 ---E---NLPGGPDN---IKLAPDG-SFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA-ANG 328 (373)
Q Consensus 260 ---~---~~~g~p~~---i~~d~dG-~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g 328 (373)
. .....|.+ ++++++| ++||+........ .....+.+..+| ...
T Consensus 306 ~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gt-------------------------hk~~s~~VsVID~~T~ 360 (426)
T 3c75_H 306 ALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWK-------------------------HKAASRFVVVLNAETG 360 (426)
T ss_dssp SSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTC-------------------------TTSCEEEEEEEETTTC
T ss_pred eccccccccccccCCceeeEEcCCCCEEEEEeccccccc-------------------------ccCCCCEEEEEECCCC
Confidence 0 00012333 7888876 5788864320000 001124577888 457
Q ss_pred cEEEEEeCCCCceecceeEEEEe--CC-EEEEeeCCCCeEEEeeCCC
Q 017317 329 IVIRKFEDPNGKVMSFVTSALEF--DD-HLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 329 ~~~~~~~~~~g~~~~~~~~~~~~--~g-~L~vgs~~~~~i~~~~l~~ 372 (373)
+++..+.... .+..+... +. .||+.+..++.|+++++..
T Consensus 361 kvv~~I~vg~-----~P~gia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 361 ERINKIELGH-----EIDSINVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp CEEEEEEEEE-----EECEEEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred eEEEEEECCC-----CcCeEEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 7887775322 24555554 34 6888888899999999763
No 116
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.97 E-value=1.4e-07 Score=85.79 Aligned_cols=158 Identities=11% Similarity=0.001 Sum_probs=93.8
Q ss_pred eEEEecCCCEEEE-ecCCeEEEEE-cCCceEEeeeecC--ccccCeEECCCCc-EEEEECC-CcEEEEe-cCC-cE-EEe
Q 017317 81 DVCVDRNGVLYTA-TRDGWIKRLH-KNGTWENWKLIGG--DTLLGITTTQENE-ILVCDAD-KGLLKVT-EEG-VT-VLA 151 (373)
Q Consensus 81 ~ia~d~~G~l~v~-~~~g~I~~~~-~~g~~~~~~~~~~--~p~~gl~~d~~g~-L~va~~~-~gl~~~~-~~g-~~-~l~ 151 (373)
++++.+++.+|+. ..++.|..++ .+++......... .+. +++++++|+ +|++... ..|..++ .++ .. .+.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPG-TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSC-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCc-eeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 3455668888854 4789999999 4555443333334 578 999999996 7887654 4577888 566 32 221
Q ss_pred ec-cCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEE---EeecCCCCcceEEEc
Q 017317 152 SH-VNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS---ILLDSLFFANGVALS 226 (373)
Q Consensus 152 ~~-~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~---~~~~~~~~~~gi~~~ 226 (373)
.. ..+.....+.++++++||+ +|++.......... .....+.|+.+|..+++.. ........+.+++++
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~------~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s 156 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH------YVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAA 156 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSC------EEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEEC
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccc------cccCCCeEEEEECCCccccceeeeccCCCcccceeEC
Confidence 11 0111123478999999995 67665210000000 0011368999998764321 112223356788899
Q ss_pred cCCCEEEEEeCCCCeEEEEEecC
Q 017317 227 KDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 227 ~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
+||+ +|++. ..|++++...
T Consensus 157 ~dg~-l~~~~---~~i~~~d~~~ 175 (349)
T 1jmx_B 157 DDGS-LYVAG---PDIYKMDVKT 175 (349)
T ss_dssp TTSC-EEEES---SSEEEECTTT
T ss_pred CCCc-EEEcc---CcEEEEeCCC
Confidence 9999 88863 2388887643
No 117
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.96 E-value=4e-07 Score=78.47 Aligned_cols=155 Identities=13% Similarity=0.133 Sum_probs=108.6
Q ss_pred cccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC--CCCcceEEEccCCCEEEEEeC
Q 017317 160 NLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVALSKDEDYLVVCET 237 (373)
Q Consensus 160 ~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~~gi~~~~dg~~l~v~~~ 237 (373)
.+..+|.++. +.||++++. .....|.++|++++++.....- ..+..|+++ +++.||+.+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~---------------~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~--~~~~ly~ltw 82 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGE---------------TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVA--WRDRLIQLTW 82 (243)
T ss_dssp CCEEEEEEET-TEEEEEECC---------------TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEES
T ss_pred cccccEEEEC-CEEEEECCC---------------CCCceEEEEECCCCCEEEEEeCCCCcceeEEEE--eCCEEEEEEe
Confidence 4667899985 899999764 1235899999999987654432 333455555 5678999999
Q ss_pred CCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCc
Q 017317 238 FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHK 317 (373)
Q Consensus 238 ~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 317 (373)
.++.+++||.+.. .....+. .++.+.+++.| .++||++....
T Consensus 83 ~~~~v~v~D~~tl--~~~~ti~--~~~~Gwglt~d-g~~L~vSdgs~--------------------------------- 124 (243)
T 3mbr_X 83 RNHEGFVYDLATL--TPRARFR--YPGEGWALTSD-DSHLYMSDGTA--------------------------------- 124 (243)
T ss_dssp SSSEEEEEETTTT--EEEEEEE--CSSCCCEEEEC-SSCEEEECSSS---------------------------------
T ss_pred eCCEEEEEECCcC--cEEEEEe--CCCCceEEeeC-CCEEEEECCCC---------------------------------
Confidence 8999999996432 2222332 23455677755 35799997432
Q ss_pred cEEEEEECCC-CcEEEEEeC-CCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCCC
Q 017317 318 KAAVVNVAAN-GIVIRKFED-PNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 318 ~g~v~~~~~~-g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~~ 372 (373)
.+..+|++ .+.+..+.. .++..+..+..+...+|+||+....+|.|.++++.+
T Consensus 125 --~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~t 179 (243)
T 3mbr_X 125 --VIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPAS 179 (243)
T ss_dssp --EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTT
T ss_pred --eEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCC
Confidence 47888965 567666654 244555566677777999999999999999999864
No 118
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.95 E-value=2.7e-06 Score=76.51 Aligned_cols=225 Identities=11% Similarity=0.017 Sum_probs=138.2
Q ss_pred CcceEEEecCCCEE-EEecCCeEEEEEc-CCceE---EeeeecCccccCeEECCCCcE-EEEECCCcEEEEe-cCC--cE
Q 017317 78 GPEDVCVDRNGVLY-TATRDGWIKRLHK-NGTWE---NWKLIGGDTLLGITTTQENEI-LVCDADKGLLKVT-EEG--VT 148 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~g~I~~~~~-~g~~~---~~~~~~~~p~~gl~~d~~g~L-~va~~~~gl~~~~-~~g--~~ 148 (373)
...++++.++|... ++..+|.|..++. +++.. .+........ .+++.+++++ +++...+.+..++ .++ ..
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 35678888888744 7778899999983 34321 2222233455 8899998865 4555555677788 555 23
Q ss_pred EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccC
Q 017317 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKD 228 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~d 228 (373)
.+.. ....+..+++.++|...++.+. .+.|..+|..+++.............++++++
T Consensus 178 ~~~~-----~~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~ 235 (337)
T 1gxr_A 178 QFQG-----HTDGASCIDISNDGTKLWTGGL-----------------DNTVRSWDLREGRQLQQHDFTSQIFSLGYCPT 235 (337)
T ss_dssp EECC-----CSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTTEEEEEEECSSCEEEEEECTT
T ss_pred eeec-----ccCceEEEEECCCCCEEEEEec-----------------CCcEEEEECCCCceEeeecCCCceEEEEECCC
Confidence 2211 1235678999999976655432 47899999887765544444445678999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchh
Q 017317 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKL 308 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 308 (373)
++.++++. .++.+..|++..... ..+. ...+....++++++|++.++....
T Consensus 236 ~~~l~~~~-~~~~i~~~~~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l~~~~~d------------------------ 286 (337)
T 1gxr_A 236 GEWLAVGM-ESSNVEVLHVNKPDK---YQLH-LHESCVLSLKFAYCGKWFVSTGKD------------------------ 286 (337)
T ss_dssp SSEEEEEE-TTSCEEEEETTSSCE---EEEC-CCSSCEEEEEECTTSSEEEEEETT------------------------
T ss_pred CCEEEEEc-CCCcEEEEECCCCCe---EEEc-CCccceeEEEECCCCCEEEEecCC------------------------
Confidence 99666665 456799998765432 1221 223446678899999866654432
Q ss_pred hhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEe-C-CEEEEeeCCCCeEEEeeC
Q 017317 309 IKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEF-D-DHLYLGSLNTNFIGKLPL 370 (373)
Q Consensus 309 ~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~vgs~~~~~i~~~~l 370 (373)
+.+..++ ..++.+..... . ..+..+... + ..|..++. ...|..+++
T Consensus 287 ----------g~i~~~~~~~~~~~~~~~~-~----~~v~~~~~s~~~~~l~~~~~-dg~i~iw~~ 335 (337)
T 1gxr_A 287 ----------NLLNAWRTPYGASIFQSKE-S----SSVLSCDISVDDKYIVTGSG-DKKATVYEV 335 (337)
T ss_dssp ----------SEEEEEETTTCCEEEEEEC-S----SCEEEEEECTTSCEEEEEET-TSCEEEEEE
T ss_pred ----------CcEEEEECCCCeEEEEecC-C----CcEEEEEECCCCCEEEEecC-CCeEEEEEE
Confidence 2456666 34555544332 1 246666665 3 35666664 444666554
No 119
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.94 E-value=2.5e-07 Score=87.03 Aligned_cols=206 Identities=13% Similarity=0.071 Sum_probs=116.1
Q ss_pred eeEeccCCcCCcceEEEecCCC-EEEEec----------CCeEEEEE-cCCceEEeeee--------cCccccCeEECCC
Q 017317 68 VTRLGEGILNGPEDVCVDRNGV-LYTATR----------DGWIKRLH-KNGTWENWKLI--------GGDTLLGITTTQE 127 (373)
Q Consensus 68 ~~~~~~g~~~~P~~ia~d~~G~-l~v~~~----------~g~I~~~~-~~g~~~~~~~~--------~~~p~~gl~~d~~ 127 (373)
+.++..| ..| .+++++||+ ||+++. ++.|.++| .+++....... ...|. ++++++|
T Consensus 112 v~~I~vG--~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~-~~~~spD 187 (426)
T 3c75_H 112 LGMTDGG--FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQW-MNALTPD 187 (426)
T ss_dssp EEEEEEC--SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GSEECTT
T ss_pred EEEEECC--CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcc-eEEEcCC
Confidence 3344445 458 999999764 888762 56799998 45554322222 24689 9999999
Q ss_pred C-cEEEEEC--CCcEEEEe-cCC--cEEEeeccCCccccccc----eeEEcCCCcEEEEeCCc-c--------cccccc-
Q 017317 128 N-EILVCDA--DKGLLKVT-EEG--VTVLASHVNGSRINLAD----DLIAATDGSIYFSVAST-K--------FGLHNW- 187 (373)
Q Consensus 128 g-~L~va~~--~~gl~~~~-~~g--~~~l~~~~~~~~~~~~~----~l~~~~dG~l~v~~~~~-~--------~~~~~~- 187 (373)
| .|||++. .+.+..+| .++ ...+.. .+.....+. -+++.+||++.+.+... + +.....
T Consensus 188 Gk~lyV~n~~~~~~VsVID~~t~kvv~~I~v--~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p 265 (426)
T 3c75_H 188 NKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV--PDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDEL 265 (426)
T ss_dssp SSEEEEEECSSSCEEEEEETTTTEEEEEEEC--CSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSC
T ss_pred CCEEEEEecCCCCeEEEEECCCCeEEEEEEc--CCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCc
Confidence 9 5999874 34588888 555 222221 111011122 25667788654333221 1 000000
Q ss_pred ----------ccccccccCCceEEEEeCCCCeEEEeec----------CCCCcce---EEEccCCCEEEEEeCC------
Q 017317 188 ----------GLDLLEAKPHGKLLKYDPSLNETSILLD----------SLFFANG---VALSKDEDYLVVCETF------ 238 (373)
Q Consensus 188 ----------~~~~~~~~~~g~l~~~d~~~~~~~~~~~----------~~~~~~g---i~~~~dg~~l~v~~~~------ 238 (373)
...+......+.|+.+|..++....... ....|.| +++++|++++||+...
T Consensus 266 ~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gth 345 (426)
T 3c75_H 266 LINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKH 345 (426)
T ss_dssp BCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCT
T ss_pred eeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccc
Confidence 0001111123567777765444332211 0112444 8999999999998642
Q ss_pred ---CCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEec
Q 017317 239 ---KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQ 283 (373)
Q Consensus 239 ---~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~~ 283 (373)
.+.|..+|....+.. ..+ ..+..|.++++++||+ +|+.++.
T Consensus 346 k~~s~~VsVID~~T~kvv--~~I--~vg~~P~gia~spDg~~~lyv~n~ 390 (426)
T 3c75_H 346 KAASRFVVVLNAETGERI--NKI--ELGHEIDSINVSQDAEPLLYALSA 390 (426)
T ss_dssp TSCEEEEEEEETTTCCEE--EEE--EEEEEECEEEECCSSSCEEEEEET
T ss_pred cCCCCEEEEEECCCCeEE--EEE--ECCCCcCeEEEccCCCEEEEEEcC
Confidence 347999996543321 111 1233699999999998 6666653
No 120
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.94 E-value=5.3e-08 Score=87.48 Aligned_cols=184 Identities=9% Similarity=0.049 Sum_probs=115.2
Q ss_pred CcceEEE---ecCCCEEEEec--------------CCeEEEEEcC----CceEEeeee--------------cCccccCe
Q 017317 78 GPEDVCV---DRNGVLYTATR--------------DGWIKRLHKN----GTWENWKLI--------------GGDTLLGI 122 (373)
Q Consensus 78 ~P~~ia~---d~~G~l~v~~~--------------~g~I~~~~~~----g~~~~~~~~--------------~~~p~~gl 122 (373)
.|.+|.+ |++|+||+... ...|+++|.+ ++....... ...++ ++
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~n-Dv 142 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVV-QS 142 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEE-EE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCc-ee
Confidence 4678999 78999997332 4679999954 655433321 12467 99
Q ss_pred EECCCCcEEEEEC-C-CcEEEEecCC--cEEEeecc-CCccccccceeEEcCCCcEEEEeCCccccccccccccccccCC
Q 017317 123 TTTQENEILVCDA-D-KGLLKVTEEG--VTVLASHV-NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPH 197 (373)
Q Consensus 123 ~~d~~g~L~va~~-~-~gl~~~~~~g--~~~l~~~~-~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~ 197 (373)
++|++|+.||++. . ..|++++++| ...+.... .......+++|++.|+|++++...+ .
T Consensus 143 avD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-----------------~ 205 (334)
T 2p9w_A 143 AQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-----------------P 205 (334)
T ss_dssp EECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-----------------S
T ss_pred EECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-----------------C
Confidence 9999999999654 3 4599999777 34333221 1223346889999999975554321 4
Q ss_pred ceEEEEeCCCCeE-EEeec------CCCCcceE-EEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCC--CCC
Q 017317 198 GKLLKYDPSLNET-SILLD------SLFFANGV-ALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPG--GPD 267 (373)
Q Consensus 198 g~l~~~d~~~~~~-~~~~~------~~~~~~gi-~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g--~p~ 267 (373)
|+|+++|..+... ..-.. .+..+.++ ....+|+.++|++..++.+.....++ -...+.... .++ .+.
T Consensus 206 g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~Dg--W~sa~~~g~-~~~~~~~~ 282 (334)
T 2p9w_A 206 RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDN--WKSANIKKT-KRSELQNS 282 (334)
T ss_dssp SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSST--TSEEEEEEE-ECGGGGSS
T ss_pred CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCC--cceeEEeee-ecCccccC
Confidence 8899999763222 01111 35567885 55668887799887665444444333 222222221 122 167
Q ss_pred ceeEC------CCCCEEEEEe
Q 017317 268 NIKLA------PDGSFWIAIL 282 (373)
Q Consensus 268 ~i~~d------~dG~lwva~~ 282 (373)
+++.+ .++++|+...
T Consensus 283 g~tt~t~~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 283 GFTAVADYYQGSEQGLYAVSA 303 (334)
T ss_dssp CEEEEEEEEETTEEEEEEEEC
T ss_pred ceeEEEEeccccCCeEEEEee
Confidence 77766 6789999874
No 121
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.92 E-value=2.5e-07 Score=86.58 Aligned_cols=189 Identities=13% Similarity=0.090 Sum_probs=112.4
Q ss_pred cCCcceEEEecCCCEEEEe-c------CCeEEEEEc-CCceEEeeeecCc----cccCeEECCCCcEEEEEC--------
Q 017317 76 LNGPEDVCVDRNGVLYTAT-R------DGWIKRLHK-NGTWENWKLIGGD----TLLGITTTQENEILVCDA-------- 135 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~-~------~g~I~~~~~-~g~~~~~~~~~~~----p~~gl~~d~~g~L~va~~-------- 135 (373)
...|..+...++| ||+.. . .|+|..+|. ++++......... +. .+.+.++++.+++..
T Consensus 137 ~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y-d~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 137 YSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY-DFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC-CEEEETTTTEEEECBCCCHHHHT
T ss_pred CCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc-eEEECCCCCEEEEccCcCccccc
Confidence 4579999999999 88754 2 278999994 4554332222222 33 466788888666542
Q ss_pred ------------CCcEEEEe-cCC--cEEEeeccCCccccccceeEE--cCCC-cEEEEeCCccccccccccccccccCC
Q 017317 136 ------------DKGLLKVT-EEG--VTVLASHVNGSRINLADDLIA--ATDG-SIYFSVASTKFGLHNWGLDLLEAKPH 197 (373)
Q Consensus 136 ------------~~gl~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~--~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~ 197 (373)
...|..++ .++ .+.+. .+.....|..|.+ +|+| .+|++..- .....+
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~---vg~~g~~P~~i~f~~~Pdg~~aYV~~e~------------~~~~Ls 279 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT---LGEENRMALELRPLHDPTKLMGFINMVV------------SLKDLS 279 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEE---SCTTEEEEEEEEECSSTTCCEEEEEEEE------------ETTTCC
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEe---cCCCCCccceeEeeECCCCCEEEEEEee------------eccCCC
Confidence 35677887 555 22222 1212234666666 8998 57887530 000012
Q ss_pred ceEEEEeCCCCeEEEee-----c-----C-----------CCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcc-e
Q 017317 198 GKLLKYDPSLNETSILL-----D-----S-----------LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQ-T 255 (373)
Q Consensus 198 g~l~~~d~~~~~~~~~~-----~-----~-----------~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~-~ 255 (373)
+.|+++..+.++.+... . . ...|.+|.+++||++|||++.+.+.|..|++......+ .
T Consensus 280 s~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv 359 (462)
T 2ece_A 280 SSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLT 359 (462)
T ss_dssp EEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEE
T ss_pred ceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE
Confidence 45544332234332111 0 0 24578999999999999999999999999986332111 1
Q ss_pred eEE-ec------------CCCCCCCceeECCCCC-EEEEE
Q 017317 256 EIF-VE------------NLPGGPDNIKLAPDGS-FWIAI 281 (373)
Q Consensus 256 ~~~-~~------------~~~g~p~~i~~d~dG~-lwva~ 281 (373)
... .. .+.+.|.++++++||+ ||++.
T Consensus 360 ~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 360 GKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 111 11 1123699999999996 66665
No 122
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.91 E-value=1.2e-05 Score=72.77 Aligned_cols=232 Identities=14% Similarity=0.072 Sum_probs=141.2
Q ss_pred CCcCCcceEEEecCCCEE-EEecCCeEEEEE-cCCce-EEeeeecCccccCeEECCCCcEEEEECC-CcEEEEe-cCC-c
Q 017317 74 GILNGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTW-ENWKLIGGDTLLGITTTQENEILVCDAD-KGLLKVT-EEG-V 147 (373)
Q Consensus 74 g~~~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~-~~~~~~~~~p~~gl~~d~~g~L~va~~~-~gl~~~~-~~g-~ 147 (373)
|.-..-.++++.+++.+. .++.++.|..++ .+++. ..+........ .+++.++|+.+++... +.+..++ +++ .
T Consensus 78 gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~g~~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 78 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW-TLAFSPDSQYLATGTHVGKVNIFGVESGKK 156 (321)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCC-CEEECTTSSEEEEECTTSEEEEEETTTCSE
T ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEE-EEEECCCCCEEEEEcCCCcEEEEEcCCCce
Confidence 333445667788877665 667899999999 45543 33333334456 8999999986665443 4456666 555 2
Q ss_pred EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCC-CCcceEEEc
Q 017317 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL-FFANGVALS 226 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~-~~~~gi~~~ 226 (373)
...... ....+..+++.|+|++.++.+. .+.|..+|..+++......+. .....++|+
T Consensus 157 ~~~~~~----~~~~v~~~~~spdg~~lasg~~-----------------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 215 (321)
T 3ow8_A 157 EYSLDT----RGKFILSIAYSPDGKYLASGAI-----------------DGIINIFDIATGKLLHTLEGHAMPIRSLTFS 215 (321)
T ss_dssp EEEEEC----SSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCCCEEEEC
T ss_pred eEEecC----CCceEEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCcEEEEEcccCCceeEEEEc
Confidence 221111 1134678999999987666432 477888998877755444433 335789999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcc
Q 017317 227 KDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFP 306 (373)
Q Consensus 227 ~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~ 306 (373)
|+++ ++++...++.|..|++..... ...+. .-.+....+++.++|.+.++....
T Consensus 216 pd~~-~l~s~s~dg~i~iwd~~~~~~--~~~~~-~h~~~v~~~~~sp~~~~l~s~s~D---------------------- 269 (321)
T 3ow8_A 216 PDSQ-LLVTASDDGYIKIYDVQHANL--AGTLS-GHASWVLNVAFCPDDTHFVSSSSD---------------------- 269 (321)
T ss_dssp TTSC-EEEEECTTSCEEEEETTTCCE--EEEEC-CCSSCEEEEEECTTSSEEEEEETT----------------------
T ss_pred CCCC-EEEEEcCCCeEEEEECCCcce--eEEEc-CCCCceEEEEECCCCCEEEEEeCC----------------------
Confidence 9998 555555677888888754321 11221 122335568889999876654432
Q ss_pred hhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEeC-C-EEEEeeCCCCeEEEeeC
Q 017317 307 KLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFD-D-HLYLGSLNTNFIGKLPL 370 (373)
Q Consensus 307 ~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~-g-~L~vgs~~~~~i~~~~l 370 (373)
+.+..+| .+++.+..+.... ..+..+.... + .|..++. ...|...+.
T Consensus 270 ------------~~v~iwd~~~~~~~~~~~~h~----~~v~~v~~s~~g~~l~s~~~-d~~i~vwd~ 319 (321)
T 3ow8_A 270 ------------KSVKVWDVGTRTCVHTFFDHQ----DQVWGVKYNGNGSKIVSVGD-DQEIHIYDC 319 (321)
T ss_dssp ------------SCEEEEETTTTEEEEEECCCS----SCEEEEEECTTSSEEEEEET-TCCEEEEEC
T ss_pred ------------CcEEEEeCCCCEEEEEEcCCC----CcEEEEEECCCCCEEEEEeC-CCeEEEEeC
Confidence 1255556 3567777775443 3467777763 3 4555554 444666654
No 123
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.90 E-value=1.6e-06 Score=84.63 Aligned_cols=217 Identities=15% Similarity=0.135 Sum_probs=136.3
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEEcCCceE-EeeeecCccccCeEECCCCcEEE-EECCCcEEEEecCC--cEEEe
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKNGTWE-NWKLIGGDTLLGITTTQENEILV-CDADKGLLKVTEEG--VTVLA 151 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~~~g~~~-~~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~~~g--~~~l~ 151 (373)
....++++.++|... ++..+|.|..++.+++.. .+........ ++++.++|+.++ +...+.+..++.++ .+.+.
T Consensus 345 ~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~ 423 (577)
T 2ymu_A 345 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 423 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEE-EEEECTTSSCEEEEETTSEEEEECTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEec
Confidence 345678899988766 677889898888776543 2322234456 899999997555 44444455566545 33332
Q ss_pred eccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCE
Q 017317 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDY 231 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~ 231 (373)
.. ...+.++++.||+.+.++.+. .+.|..+|..+.....+.........++|+||++.
T Consensus 424 ~~-----~~~v~~~~~s~d~~~l~~~~~-----------------d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~ 481 (577)
T 2ymu_A 424 GH-----SSSVWGVAFSPDDQTIASASD-----------------DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQT 481 (577)
T ss_dssp CC-----SSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCE
T ss_pred CC-----CCCeEEEEECCCCCEEEEEcC-----------------CCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCE
Confidence 21 124678999999987666432 46788888765544444433445578999999995
Q ss_pred EEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhh
Q 017317 232 LVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKL 311 (373)
Q Consensus 232 l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 311 (373)
|..+ ..+..|..++.++.. ...+. .-......++++++|++.++....
T Consensus 482 las~-~~d~~i~iw~~~~~~---~~~~~-~h~~~v~~l~~s~dg~~l~s~~~d--------------------------- 529 (577)
T 2ymu_A 482 IASA-SDDKTVKLWNRNGQL---LQTLT-GHSSSVRGVAFSPDGQTIASASDD--------------------------- 529 (577)
T ss_dssp EEEE-ETTSEEEEEETTSCE---EEEEE-CCSSCEEEEEECTTSSCEEEEETT---------------------------
T ss_pred EEEE-eCCCEEEEEcCCCCE---EEEEe-CCCCCEEEEEEcCCCCEEEEEECc---------------------------
Confidence 5544 456678888755431 22222 112335668899999866554332
Q ss_pred ccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-CCE-EEEee
Q 017317 312 VAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-DDH-LYLGS 359 (373)
Q Consensus 312 ~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~-L~vgs 359 (373)
+.|..+|.+|+.+..+.... ..++.+.+. +++ |.-++
T Consensus 530 -------g~v~lwd~~~~~~~~~~~h~----~~v~~~~fs~dg~~l~s~~ 568 (577)
T 2ymu_A 530 -------KTVKLWNRNGQLLQTLTGHS----SSVWGVAFSPDGQTIASAS 568 (577)
T ss_dssp -------SEEEEECTTSCEEEEEECCS----SCEEEEEECTTSSCEEEEE
T ss_pred -------CEEEEEeCCCCEEEEEcCCC----CCEEEEEEcCCCCEEEEEe
Confidence 24677788899888886544 347777776 344 44444
No 124
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.89 E-value=3.7e-06 Score=82.07 Aligned_cols=179 Identities=14% Similarity=0.177 Sum_probs=110.1
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEEcCCc-eEEeeeecCccccCeEECCCCcEEEEECCCc-EEEEecCC--cEEEe
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKNGT-WENWKLIGGDTLLGITTTQENEILVCDADKG-LLKVTEEG--VTVLA 151 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~~~g~-~~~~~~~~~~p~~gl~~d~~g~L~va~~~~g-l~~~~~~g--~~~l~ 151 (373)
....++++.++|... ++..++.|..++.+++ ...+........ ++++.++|+..++....+ +..++.++ ...+.
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~ 382 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVW-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 382 (577)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTCCEEEEEE
T ss_pred CCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEE-EEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEec
Confidence 345678888888766 5678888988886554 333333334456 889999998665433344 44455555 33332
Q ss_pred eccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCE
Q 017317 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDY 231 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~ 231 (373)
.. ...+.++++++||+..++.+. .+.|..+|........+.........++|+||++.
T Consensus 383 ~~-----~~~v~~~~~s~dg~~l~~~~~-----------------d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~ 440 (577)
T 2ymu_A 383 GH-----SSSVRGVAFSPDGQTIASASD-----------------DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQT 440 (577)
T ss_dssp CC-----SSCEEEEEECTTSSCEEEEET-----------------TSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred CC-----CCCeEEEEECCCCCEEEEEeC-----------------CCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCE
Confidence 11 134678999999976655332 36788888654444444333344568999999995
Q ss_pred EEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEec
Q 017317 232 LVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 232 l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~ 283 (373)
+..+ ..++.|..|+.++.. ...+. ........++++++|++.++...
T Consensus 441 l~~~-~~d~~v~~w~~~~~~---~~~~~-~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 441 IASA-SDDKTVKLWNRNGQL---LQTLT-GHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp EEEE-ETTSEEEEEETTSCE---EEEEE-CCSSCEEEEEECTTSCEEEEEET
T ss_pred EEEE-cCCCEEEEEECCCCE---EEEEc-CCCCCEEEEEEcCCCCEEEEEeC
Confidence 5554 456678888865431 22222 22234566889999987766543
No 125
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.88 E-value=5.2e-06 Score=76.72 Aligned_cols=238 Identities=14% Similarity=0.128 Sum_probs=131.6
Q ss_pred ccccceeEeccCCcC----CcceEEEecCCCEEEEecCCeEEEEE-cCCceEEeeeec----------CccccCeEECCC
Q 017317 63 SDIQSVTRLGEGILN----GPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIG----------GDTLLGITTTQE 127 (373)
Q Consensus 63 ~~l~~~~~~~~g~~~----~P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~----------~~p~~gl~~d~~ 127 (373)
..+..+++...+.-. .....+++ +|.||+++.++.|+.+| .+|+..-..... ......+.. .+
T Consensus 26 ~~~~~~W~~~~~~~~~~~~~~~~p~v~-~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~ 103 (376)
T 3q7m_A 26 FTPTTAWSTSVGSGIGNFYSNLHPALA-DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SG 103 (376)
T ss_dssp SCCEEEEEECCTTTTTTSCCCCCCEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ET
T ss_pred CcceEEeEEecCCCccccceeeccEEE-CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eC
Confidence 345555665544211 11123554 78999999999999999 467654222211 111113334 46
Q ss_pred CcEEEEECCCcEEEEe-cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeC
Q 017317 128 NEILVCDADKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDP 205 (373)
Q Consensus 128 g~L~va~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 205 (373)
+.+|+++....|+.+| .+| ...-.. ..+.. .....+ .+|.+|++.. .+.|+.+|.
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W~~~-~~~~~---~~~p~~-~~~~v~v~~~------------------~g~l~~~d~ 160 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAWQTK-VAGEA---LSRPVV-SDGLVLIHTS------------------NGQLQALNE 160 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEE-CSSCC---CSCCEE-ETTEEEEECT------------------TSEEEEEET
T ss_pred CEEEEEcCCCEEEEEECCCCCEEEEEe-CCCce---EcCCEE-ECCEEEEEcC------------------CCeEEEEEC
Confidence 8999998777899999 678 433222 12111 111222 3679999864 378999999
Q ss_pred CCCeEEEeecCCCC------cceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCC--------CCceeE
Q 017317 206 SLNETSILLDSLFF------ANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGG--------PDNIKL 271 (373)
Q Consensus 206 ~~~~~~~~~~~~~~------~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~--------p~~i~~ 271 (373)
.+++.......... ....++. + ..+|+. +.++.++.++....+........ ...+. ......
T Consensus 161 ~tG~~~W~~~~~~~~~~~~~~~~~~~~-~-~~v~~g-~~~g~l~~~d~~tG~~~w~~~~~-~~~~~~~~~~~~~~~~~p~ 236 (376)
T 3q7m_A 161 ADGAVKWTVNLDMPSLSLRGESAPTTA-F-GAAVVG-GDNGRVSAVLMEQGQMIWQQRIS-QATGSTEIDRLSDVDTTPV 236 (376)
T ss_dssp TTCCEEEEEECCC-----CCCCCCEEE-T-TEEEEC-CTTTEEEEEETTTCCEEEEEECC-C-----------CCCCCCE
T ss_pred CCCcEEEEEeCCCCceeecCCCCcEEE-C-CEEEEE-cCCCEEEEEECCCCcEEEEEecc-cCCCCcccccccccCCCcE
Confidence 88875533221111 1223333 3 346665 44668999986533221111100 00000 011112
Q ss_pred CCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeEEEE
Q 017317 272 APDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTSALE 350 (373)
Q Consensus 272 d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~ 350 (373)
..+|.+|+++..+ .+..+|+ +|+.+...... ....+..
T Consensus 237 ~~~~~v~~~~~~g-----------------------------------~l~~~d~~tG~~~w~~~~~------~~~~~~~ 275 (376)
T 3q7m_A 237 VVNGVVFALAYNG-----------------------------------NLTALDLRSGQIMWKRELG------SVNDFIV 275 (376)
T ss_dssp EETTEEEEECTTS-----------------------------------CEEEEETTTCCEEEEECCC------CEEEEEE
T ss_pred EECCEEEEEecCc-----------------------------------EEEEEECCCCcEEeeccCC------CCCCceE
Confidence 2468899987654 3788885 68877655421 2344555
Q ss_pred eCCEEEEeeCCCCeEEEeeCC
Q 017317 351 FDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 351 ~~g~L~vgs~~~~~i~~~~l~ 371 (373)
.+++||+++.. ..|..+++.
T Consensus 276 ~~~~l~~~~~~-g~l~~~d~~ 295 (376)
T 3q7m_A 276 DGNRIYLVDQN-DRVMALTID 295 (376)
T ss_dssp ETTEEEEEETT-CCEEEEETT
T ss_pred ECCEEEEEcCC-CeEEEEECC
Confidence 68999999974 458888765
No 126
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.88 E-value=5.9e-07 Score=83.13 Aligned_cols=215 Identities=11% Similarity=0.149 Sum_probs=125.6
Q ss_pred CCCEEEEecCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC-cEEEeeccCCcc--ccc
Q 017317 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLASHVNGSR--INL 161 (373)
Q Consensus 87 ~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l~~~~~~~~--~~~ 161 (373)
+|.+|+++.++.|+.++ .+|+..-.............+ .+|.+|++....+++.+| .+| ....... .... ...
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~-~~~~~~~~~ 180 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNL-DMPSLSLRG 180 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEEC-CC-----CC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeC-CCCceeecC
Confidence 89999999999999999 568754322222222213334 367999988767799999 678 4332221 1111 011
Q ss_pred cceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc-------------ceEEEccC
Q 017317 162 ADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA-------------NGVALSKD 228 (373)
Q Consensus 162 ~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~-------------~gi~~~~d 228 (373)
....+++ +|.+|++.. .+.|+.+|+.+++....... ..+ ....+ .
T Consensus 181 ~~~~~~~-~~~v~~g~~------------------~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~--~ 238 (376)
T 3q7m_A 181 ESAPTTA-FGAAVVGGD------------------NGRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVV--V 238 (376)
T ss_dssp CCCCEEE-TTEEEECCT------------------TTEEEEEETTTCCEEEEEEC-CC-----------CCCCCCEE--E
T ss_pred CCCcEEE-CCEEEEEcC------------------CCEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCCcEE--E
Confidence 1223333 678998753 37899999988876532221 111 11122 2
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchh
Q 017317 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKL 308 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 308 (373)
++.+|++. .++.++.++....+. .+..... ....+..+ ++++|+++..+
T Consensus 239 ~~~v~~~~-~~g~l~~~d~~tG~~----~w~~~~~-~~~~~~~~-~~~l~~~~~~g------------------------ 287 (376)
T 3q7m_A 239 NGVVFALA-YNGNLTALDLRSGQI----MWKRELG-SVNDFIVD-GNRIYLVDQND------------------------ 287 (376)
T ss_dssp TTEEEEEC-TTSCEEEEETTTCCE----EEEECCC-CEEEEEEE-TTEEEEEETTC------------------------
T ss_pred CCEEEEEe-cCcEEEEEECCCCcE----EeeccCC-CCCCceEE-CCEEEEEcCCC------------------------
Confidence 34577775 456899998653321 1221111 22334443 77899998754
Q ss_pred hhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCC
Q 017317 309 IKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 309 ~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~ 371 (373)
.++.+|+ +|+.........+ .........+++||+++.. ..|..++..
T Consensus 288 -----------~l~~~d~~tG~~~w~~~~~~~---~~~~~~~~~~~~l~v~~~~-g~l~~~d~~ 336 (376)
T 3q7m_A 288 -----------RVMALTIDGGVTLWTQSDLLH---RLLTSPVLYNGNLVVGDSE-GYLHWINVE 336 (376)
T ss_dssp -----------CEEEEETTTCCEEEEECTTTT---SCCCCCEEETTEEEEECTT-SEEEEEETT
T ss_pred -----------eEEEEECCCCcEEEeecccCC---CcccCCEEECCEEEEEeCC-CeEEEEECC
Confidence 3788884 6887766543222 1233444567899999974 358877765
No 127
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.86 E-value=1.5e-06 Score=76.44 Aligned_cols=172 Identities=10% Similarity=0.051 Sum_probs=101.3
Q ss_pred CCEEEEe---cCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cC-C-cEEEeeccCCcccc
Q 017317 88 GVLYTAT---RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EE-G-VTVLASHVNGSRIN 160 (373)
Q Consensus 88 G~l~v~~---~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~-g-~~~l~~~~~~~~~~ 160 (373)
|.+|.+. .++.|+.++ .+++...+........ +++++++|+.++......++.++ .+ + ...+... ....
T Consensus 10 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~ 85 (297)
T 2ojh_A 10 TRLSTGPGGSMRSSIEIFNIRTRKMRVVWQTPELFE-APNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTG---FATI 85 (297)
T ss_dssp --------CCCCEEEEEEETTTTEEEEEEEESSCCE-EEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCT---TCCC
T ss_pred eeEeecCCCCcceeEEEEeCCCCceeeeccCCcceE-eeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccc---cccc
Confidence 4455432 456788888 4555555544455667 89999999866554456788888 66 6 5443321 1223
Q ss_pred ccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCCC
Q 017317 161 LADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKF 240 (373)
Q Consensus 161 ~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~ 240 (373)
.+.++++.+||+.++.... .......||.++..+++...+... .....++++||++.++++.....
T Consensus 86 ~~~~~~~spdg~~l~~~~~-------------~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDK-------------VEFGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp BCSCCEECTTSSEEEEEEC-------------TTTSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETT
T ss_pred cccceEECCCCCEEEEEEe-------------CCCCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCC
Confidence 5678899999975444321 011346899999877765554332 33677899999998886655455
Q ss_pred e--EEEEEecCCCCcceeEEecCCCCCCCceeECCCCCE-EEEE
Q 017317 241 R--CLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF-WIAI 281 (373)
Q Consensus 241 ~--i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~l-wva~ 281 (373)
. |+.++..+.. ...+. .....+..++++++|+. +++.
T Consensus 152 ~~~l~~~~~~~~~---~~~~~-~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 152 VFDIYSMDIDSGV---ETRLT-HGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEEEEEEETTTCC---EEECC-CSSSCEEEEEECTTSSEEEEEE
T ss_pred ceEEEEEECCCCc---ceEcc-cCCCccccceECCCCCEEEEEe
Confidence 4 4444443322 22222 22334567888999974 4444
No 128
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.85 E-value=4.9e-07 Score=78.67 Aligned_cols=153 Identities=10% Similarity=0.042 Sum_probs=106.0
Q ss_pred cccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-ecCCCCcceEEEccCCCEEEEEeCC
Q 017317 160 NLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVALSKDEDYLVVCETF 238 (373)
Q Consensus 160 ~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~~gi~~~~dg~~l~v~~~~ 238 (373)
.+..+|.++ ++.||++++. .|.|.++|++++++... ...-.+..|+++ +++.||+++..
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~-----------------~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~--~g~~Ly~ltw~ 114 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGH-----------------QGTLRQLSLESAQPVWMERLGNIFAEGLAS--DGERLYQLTWT 114 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETT-----------------TTEEEECCSSCSSCSEEEECTTCCEEEEEE--CSSCEEEEESS
T ss_pred cccceEEEE-CCEEEEEcCC-----------------CCEEEEEECCCCcEEeEECCCCcceeEEEE--eCCEEEEEEcc
Confidence 355788887 5799999864 36799999998875432 333334456665 55679999988
Q ss_pred CCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCcc
Q 017317 239 KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKK 318 (373)
Q Consensus 239 ~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 318 (373)
++.+++||.+.. .....+. .++.+.+++.|. ++||++....
T Consensus 115 ~~~v~V~D~~Tl--~~~~ti~--~~~eGwGLt~Dg-~~L~vSdGs~---------------------------------- 155 (268)
T 3nok_A 115 EGLLFTWSGMPP--QRERTTR--YSGEGWGLCYWN-GKLVRSDGGT---------------------------------- 155 (268)
T ss_dssp SCEEEEEETTTT--EEEEEEE--CSSCCCCEEEET-TEEEEECSSS----------------------------------
T ss_pred CCEEEEEECCcC--cEEEEEe--CCCceeEEecCC-CEEEEECCCC----------------------------------
Confidence 999999996532 2222332 123456777652 3688886322
Q ss_pred EEEEEECCC-CcEEEEEeC-CCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCCC
Q 017317 319 AAVVNVAAN-GIVIRKFED-PNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 319 g~v~~~~~~-g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~~ 372 (373)
.+..+|++ .+++..+.. .++..+..+..+...+|+||+..+.++.|.++++..
T Consensus 156 -~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~T 210 (268)
T 3nok_A 156 -MLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIWHSSDVLEIDPAT 210 (268)
T ss_dssp -EEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTCSEEEEECTTT
T ss_pred -EEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEECCCCeEEEEeCCC
Confidence 47888965 577776654 244545566777777899999999999999999864
No 129
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.83 E-value=5.2e-06 Score=75.92 Aligned_cols=234 Identities=8% Similarity=-0.006 Sum_probs=134.8
Q ss_pred CcceEEEecCCCEE-EEecCCeEEEEE-cCCc---eEEeeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC-cEE
Q 017317 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGT---WENWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG-VTV 149 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~---~~~~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g-~~~ 149 (373)
...++++.++|.+. ++..++.|..++ .+++ ...+........ .+++.++|++++ +...+.+..++ .++ ...
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVT-GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEE-EEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCccc-EEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 35678899988766 666899999998 4443 223333334456 899999987555 45445577777 555 322
Q ss_pred EeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe----EEEeecC-CCCcceEE
Q 017317 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE----TSILLDS-LFFANGVA 224 (373)
Q Consensus 150 l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~----~~~~~~~-~~~~~gi~ 224 (373)
.... .+ ....+.++++.++|.+.++.+. .+.|..+|.++++ ....... ......++
T Consensus 89 ~~~~-~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~ 149 (372)
T 1k8k_C 89 TLVI-LR-INRAARCVRWAPNEKKFAVGSG-----------------SRVISICYFEQENDWWVCKHIKKPIRSTVLSLD 149 (372)
T ss_dssp EEEC-CC-CSSCEEEEEECTTSSEEEEEET-----------------TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEE
T ss_pred eEEe-ec-CCCceeEEEECCCCCEEEEEeC-----------------CCEEEEEEecCCCcceeeeeeecccCCCeeEEE
Confidence 2111 11 1235778999999976555432 2455554444333 1222222 33457899
Q ss_pred EccCCCEEEEEeCCCCeEEEEEecCCC---------------CcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchh
Q 017317 225 LSKDEDYLVVCETFKFRCLKYWLKGES---------------KEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGL 289 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~~i~~~~~~~~~---------------~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~ 289 (373)
++++++.++.+ ..++.|..|++.... .+..........+....++++++|++.++....
T Consensus 150 ~~~~~~~l~~~-~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d----- 223 (372)
T 1k8k_C 150 WHPNSVLLAAG-SCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHD----- 223 (372)
T ss_dssp ECTTSSEEEEE-ETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETT-----
T ss_pred EcCCCCEEEEE-cCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCC-----
Confidence 99999855555 456678888854211 111111111122345668888999755554322
Q ss_pred hhccCChHHHHHHHhcchhhhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeEEE
Q 017317 290 EFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFIGK 367 (373)
Q Consensus 290 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~ 367 (373)
+.+..+|. +++.+..+....+ .+..+... ++++.+++ ....|..
T Consensus 224 -----------------------------~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~-~d~~i~i 269 (372)
T 1k8k_C 224 -----------------------------STVCLADADKKMAVATLASETL----PLLAVTFITESSLVAAG-HDCFPVL 269 (372)
T ss_dssp -----------------------------TEEEEEEGGGTTEEEEEECSSC----CEEEEEEEETTEEEEEE-TTSSCEE
T ss_pred -----------------------------CEEEEEECCCCceeEEEccCCC----CeEEEEEecCCCEEEEE-eCCeEEE
Confidence 23566663 5777777765432 45666655 56665555 5566766
Q ss_pred eeCC
Q 017317 368 LPLK 371 (373)
Q Consensus 368 ~~l~ 371 (373)
+++.
T Consensus 270 ~~~~ 273 (372)
T 1k8k_C 270 FTYD 273 (372)
T ss_dssp EEEE
T ss_pred EEcc
Confidence 6654
No 130
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.82 E-value=1.5e-06 Score=81.28 Aligned_cols=190 Identities=11% Similarity=0.059 Sum_probs=114.7
Q ss_pred CCCEEEEe-cCCeEEEEEc---CCceEEe--e-------e-ecCccccCeEECCCCcEEEEECC-------CcEEEEe-c
Q 017317 87 NGVLYTAT-RDGWIKRLHK---NGTWENW--K-------L-IGGDTLLGITTTQENEILVCDAD-------KGLLKVT-E 144 (373)
Q Consensus 87 ~G~l~v~~-~~g~I~~~~~---~g~~~~~--~-------~-~~~~p~~gl~~d~~g~L~va~~~-------~gl~~~~-~ 144 (373)
...||+.. .+++|+.+|. ..+.+.. . . ...+|+ ++...++| +||+..+ ++++.+| .
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph-~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLH-TVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEE-EEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCccc-ceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 45677765 6789999992 2222221 1 1 123788 89999999 9986332 4688898 5
Q ss_pred CC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccc------cccccccccCCceEEEEeCCCCeEEEeecC
Q 017317 145 EG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHN------WGLDLLEAKPHGKLLKYDPSLNETSILLDS 216 (373)
Q Consensus 145 ~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~------~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~ 216 (373)
++ +..+. ....+.....++.+.+++++.++.. ||... ...++.. ....+|..||.++++......-
T Consensus 173 T~~v~~~~~--~~~~~~~~~Yd~~~~p~~~~mvsS~---wg~p~~~~~g~~~~~~~~-~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 173 SFEPLGKWE--IDRGDQYLAYDFWWNLPNEVLVSSE---WAVPNTIEDGLKLEHLKD-RYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp TCCEEEECC--SBCTTCCCCCCEEEETTTTEEEECB---CCCHHHHTTCCCTTTHHH-HSCCEEEEEETTTTEEEEEEES
T ss_pred CCeEEEEEc--cCCCCccccceEEECCCCCEEEEcc---CcCccccccccchhhhhh-ccCCEEEEEECCCCcEeeEEec
Confidence 44 22221 1222334566788899997666542 22111 1112222 4567899999887754432222
Q ss_pred ---CCCcceEEE--ccCCCEEEEEeC-----CCCeEEEEEecCCCCcceeEE-------ecCC----------CCCCCce
Q 017317 217 ---LFFANGVAL--SKDEDYLVVCET-----FKFRCLKYWLKGESKEQTEIF-------VENL----------PGGPDNI 269 (373)
Q Consensus 217 ---~~~~~gi~~--~~dg~~l~v~~~-----~~~~i~~~~~~~~~~~~~~~~-------~~~~----------~g~p~~i 269 (373)
...|..+.| +|++++.|++.. ..+.|.+|..++.......+. ...+ +..|.+|
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 235667766 999999999988 778888776654221111111 0011 3578899
Q ss_pred eECCCCC-EEEEEecC
Q 017317 270 KLAPDGS-FWIAILQL 284 (373)
Q Consensus 270 ~~d~dG~-lwva~~~~ 284 (373)
.+++||+ |||++++.
T Consensus 327 ~lS~DGrfLYVSnrg~ 342 (462)
T 2ece_A 327 DISLDDKFLYLSLWGI 342 (462)
T ss_dssp EECTTSCEEEEEETTT
T ss_pred EECCCCCEEEEEeCCC
Confidence 9999996 78887764
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.81 E-value=2.2e-06 Score=80.67 Aligned_cols=204 Identities=11% Similarity=0.057 Sum_probs=128.7
Q ss_pred CcceEEEecCCCEE-EEecC---CeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEEC-C--CcEEEEe-cCC-
Q 017317 78 GPEDVCVDRNGVLY-TATRD---GWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDA-D--KGLLKVT-EEG- 146 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~---g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~-~--~gl~~~~-~~g- 146 (373)
...++++.|+|+.. +++.+ ..|+.++ .+|+...+....+... .+++.+||+ |+++.. . ..|+.++ .++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~-~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG-APAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc-CEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 45678889988744 45444 4889998 5666655544445566 899999997 443432 2 2388888 666
Q ss_pred cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEE
Q 017317 147 VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVAL 225 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~ 225 (373)
...+... ......+++.|||+ |+++... .....||.+|.++++.+.+.........++|
T Consensus 259 ~~~l~~~-----~~~~~~~~~spdg~~l~~~s~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~ 318 (415)
T 2hqs_A 259 IRQVTDG-----RSNNTEPTWFPDSQNLAFTSDQ---------------AGRPQVYKVNINGGAPQRITWEGSQNQDADV 318 (415)
T ss_dssp EEECCCC-----SSCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEETTSSCCEECCCSSSEEEEEEE
T ss_pred EEeCcCC-----CCcccceEECCCCCEEEEEECC---------------CCCcEEEEEECCCCCEEEEecCCCcccCeEE
Confidence 5443221 12456789999996 6555421 1224799999988776654433344567899
Q ss_pred ccCCCEEEEEeCC--CCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCE-EEEEecCCCchhhhccCChHHHHHH
Q 017317 226 SKDEDYLVVCETF--KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF-WIAILQLSSPGLEFVHTSKATKHLL 302 (373)
Q Consensus 226 ~~dg~~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~l-wva~~~~~~~~~~~~~~~p~~~~~~ 302 (373)
+|||+.|+++... ...|+.+++.+... ..+.. ......++++++|+. +++.....
T Consensus 319 spdG~~l~~~~~~~g~~~i~~~d~~~~~~---~~l~~--~~~~~~~~~spdg~~l~~~s~~~~----------------- 376 (415)
T 2hqs_A 319 SSDGKFMVMVSSNGGQQHIAKQDLATGGV---QVLSS--TFLDETPSLAPNGTMVIYSSSQGM----------------- 376 (415)
T ss_dssp CTTSSEEEEEEECSSCEEEEEEETTTCCE---EECCC--SSSCEEEEECTTSSEEEEEEEETT-----------------
T ss_pred CCCCCEEEEEECcCCceEEEEEECCCCCE---EEecC--CCCcCCeEEcCCCCEEEEEEcCCC-----------------
Confidence 9999988887654 35788888765432 22221 124566889999984 44443321
Q ss_pred HhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCC
Q 017317 303 AAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNG 339 (373)
Q Consensus 303 ~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g 339 (373)
...+..++.+|+....+....+
T Consensus 377 ---------------~~~l~~~d~~g~~~~~l~~~~~ 398 (415)
T 2hqs_A 377 ---------------GSVLNLVSTDGRFKARLPATDG 398 (415)
T ss_dssp ---------------EEEEEEEETTSCCEEECCCSSS
T ss_pred ---------------ccEEEEEECCCCcEEEeeCCCC
Confidence 1347778888887777765544
No 132
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.80 E-value=2.7e-06 Score=85.42 Aligned_cols=199 Identities=11% Similarity=0.041 Sum_probs=113.0
Q ss_pred CCcceEEEecCCCEEEEecCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cC-----C-cE
Q 017317 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EE-----G-VT 148 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~-----g-~~ 148 (373)
..+.++++.+++.+.++ .++.|+.++ .+++............ .+++++||+..+......|+.++ .+ | ..
T Consensus 82 ~~v~~~~~spd~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~-~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 82 FPSFRTLDAGRGLVVLF-TQGGLVGFDMLARKVTYLFDTNEETA-SLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp CCCEEEEETTTTEEEEE-ETTEEEEEETTTTEEEEEECCTTCCT-TCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCE
T ss_pred cCceeEEECCCCeEEEE-ECCEEEEEECCCCceEEccCCccccc-CCcCCCCCCEEEEEECCeEEEEecCcccccCCCcE
Confidence 45778999999555554 458999999 4555544444445566 89999999754433446688888 66 7 44
Q ss_pred EEeeccCC----------ccccccceeEEcCCCc-EEEEeCCccccccccc----------------cccccccCCceEE
Q 017317 149 VLASHVNG----------SRINLADDLIAATDGS-IYFSVASTKFGLHNWG----------------LDLLEAKPHGKLL 201 (373)
Q Consensus 149 ~l~~~~~~----------~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~----------------~~~~~~~~~g~l~ 201 (373)
.+...... .....+.+++++|||+ |+++.... -+...+. ....+......|+
T Consensus 160 ~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~ 238 (706)
T 2z3z_A 160 AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ-SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVG 238 (706)
T ss_dssp ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC-TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEE
T ss_pred EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC-CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEE
Confidence 43221111 0011247889999996 44443110 0000000 0000112345799
Q ss_pred EEeCCCCeEEEeecC---CCCcceEEEccCCCEEEEEeCCC----CeEEEEEecCCCCcceeEEe-cCCCC---CCCcee
Q 017317 202 KYDPSLNETSILLDS---LFFANGVALSKDEDYLVVCETFK----FRCLKYWLKGESKEQTEIFV-ENLPG---GPDNIK 270 (373)
Q Consensus 202 ~~d~~~~~~~~~~~~---~~~~~gi~~~~dg~~l~v~~~~~----~~i~~~~~~~~~~~~~~~~~-~~~~g---~p~~i~ 270 (373)
.+|.++++...+... ......++|+|||+.++++...+ ..|+.++..+.. ...... ..... ....++
T Consensus 239 ~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--~~~~~~~~~~~~~~~~~~~~~ 316 (706)
T 2z3z_A 239 IYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--FVRTLFVETDKHYVEPLHPLT 316 (706)
T ss_dssp EEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC--EEEEEEEEECSSCCCCCSCCE
T ss_pred EEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc--eeeEEEEccCCCeECccCCce
Confidence 999988876655422 12345789999999888865433 367788865431 111111 11111 235678
Q ss_pred ECC--CCCEEEE
Q 017317 271 LAP--DGSFWIA 280 (373)
Q Consensus 271 ~d~--dG~lwva 280 (373)
+.+ ||++.++
T Consensus 317 ~sp~~dg~~l~~ 328 (706)
T 2z3z_A 317 FLPGSNNQFIWQ 328 (706)
T ss_dssp ECTTCSSEEEEE
T ss_pred eecCCCCEEEEE
Confidence 888 8875443
No 133
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.79 E-value=2.1e-05 Score=72.93 Aligned_cols=245 Identities=12% Similarity=0.025 Sum_probs=135.6
Q ss_pred eEeccCCcCCcceEEEecCC-CEEEEec----------CCeEEEEEc-CCceEEeeee--------cCccccCeEECCCC
Q 017317 69 TRLGEGILNGPEDVCVDRNG-VLYTATR----------DGWIKRLHK-NGTWENWKLI--------GGDTLLGITTTQEN 128 (373)
Q Consensus 69 ~~~~~g~~~~P~~ia~d~~G-~l~v~~~----------~g~I~~~~~-~g~~~~~~~~--------~~~p~~gl~~d~~g 128 (373)
..+..| ..| .+++++|| .+|+.+. ++.|.++|. +++....... ...|. ++++++||
T Consensus 61 ~~i~~g--~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG 136 (373)
T 2mad_H 61 GHVNGG--FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-MNANTPNN 136 (373)
T ss_pred EEecCC--CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc-ceEECCCC
Confidence 344445 468 99999977 4788752 467889984 4443221111 23578 99999999
Q ss_pred c-EEEEECC--CcEEEEecCCcEEEeeccCCccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEe
Q 017317 129 E-ILVCDAD--KGLLKVTEEGVTVLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYD 204 (373)
Q Consensus 129 ~-L~va~~~--~gl~~~~~~g~~~l~~~~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d 204 (373)
+ ||+++.. ..|..+| ...+.+....+ .+..+.+.++| +.|++.. ..|.+..+|
T Consensus 137 ~~l~v~n~~~~~~v~viD-~t~~~~~~~i~-----~~~~~~~~~~~~~~~~~~~-----------------~dg~~~~vd 193 (373)
T 2mad_H 137 ADLLFFQFAAGPAVGLVV-QGGSSDDQLLS-----SPTCYHIHPGAPSTFYLLC-----------------AQGGLAKTD 193 (373)
T ss_pred CEEEEEecCCCCeEEEEE-CCCCEEeEEcC-----CCceEEEEeCCCceEEEEc-----------------CCCCEEEEE
Confidence 5 8888642 4577787 43222211011 11123444555 5666643 247788888
Q ss_pred CCCCeEEEeec-----CCCCc--ceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEe--c----CCCCCCCc---
Q 017317 205 PSLNETSILLD-----SLFFA--NGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFV--E----NLPGGPDN--- 268 (373)
Q Consensus 205 ~~~~~~~~~~~-----~~~~~--~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--~----~~~g~p~~--- 268 (373)
. +++...... ....| ....++++++.+|+.. ..+.++.+++.+........+. . .....|.+
T Consensus 194 ~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~ 271 (373)
T 2mad_H 194 H-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQ 271 (373)
T ss_pred C-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEe
Confidence 7 555442111 11111 2234566666666665 4567888887543221111110 0 01124666
Q ss_pred eeECCCC-CEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECCC-CcEEEEEeCCCCceeccee
Q 017317 269 IKLAPDG-SFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAAN-GIVIRKFEDPNGKVMSFVT 346 (373)
Q Consensus 269 i~~d~dG-~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~-g~~~~~~~~~~g~~~~~~~ 346 (373)
+++++|| ++|++...+.... .....+.+..+|.+ ++++..+.... .+.
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~-------------------------~~~~~~~V~VID~~t~~vv~~i~~g~-----~p~ 321 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWK-------------------------LHAAAKEVTSVTGLVGQTSSQISLGH-----DVD 321 (373)
T ss_pred EEECCCCCEEEEEeccCCccc-------------------------ccCCCCeEEEEECCCCEEEEEEECCC-----CcC
Confidence 7889887 5899875321000 00012347778854 67777775432 244
Q ss_pred EEEEe--CC-EEEEeeCCCCeEEEeeCCC
Q 017317 347 SALEF--DD-HLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 347 ~~~~~--~g-~L~vgs~~~~~i~~~~l~~ 372 (373)
.+... +. .+|+++..++.|.++++..
T Consensus 322 ~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 322 AISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 55544 34 5777777789999998763
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.78 E-value=8.9e-06 Score=76.49 Aligned_cols=160 Identities=13% Similarity=0.093 Sum_probs=100.6
Q ss_pred CeEEEEEcCC-ceEEeeeecCccccCeEECCCCc-EEEEECC---CcEEEEe-cCC-cEEEeeccCCccccccceeEEcC
Q 017317 97 GWIKRLHKNG-TWENWKLIGGDTLLGITTTQENE-ILVCDAD---KGLLKVT-EEG-VTVLASHVNGSRINLADDLIAAT 169 (373)
Q Consensus 97 g~I~~~~~~g-~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~---~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~ 169 (373)
+.|+.++.+| ....+........ ++++.++|+ |..+... ..|+.++ .+| ...+... . ..+..+++.|
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~-~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~-~----~~~~~~~~sp 232 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLM-SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASF-P----RHNGAPAFSP 232 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECC-S----SCEEEEEECT
T ss_pred ceEEEEcCCCCCCEEEeCCCCcce-eeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecC-C----CcccCEEEcC
Confidence 6788888655 3444444445566 899999997 4444433 2578888 667 5444321 1 2467889999
Q ss_pred CCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCC--CeEEEEE
Q 017317 170 DGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFK--FRCLKYW 246 (373)
Q Consensus 170 dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~--~~i~~~~ 246 (373)
||+ |+++.+. .....|+.+|..+++...+.........++|+|||+.|+++.... ..|+.++
T Consensus 233 dg~~la~~~~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d 297 (415)
T 2hqs_A 233 DGSKLAFALSK---------------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVN 297 (415)
T ss_dssp TSSEEEEEECT---------------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCCEEEEEEec---------------CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEE
Confidence 996 6655432 123569999998887766544444456799999999888776432 3788888
Q ss_pred ecCCCCcceeEEecCCCCCCCceeECCCCCEEEEE
Q 017317 247 LKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (373)
Q Consensus 247 ~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~ 281 (373)
+.+... ..+. ........+++++||+..+..
T Consensus 298 ~~~~~~---~~l~-~~~~~~~~~~~spdG~~l~~~ 328 (415)
T 2hqs_A 298 INGGAP---QRIT-WEGSQNQDADVSSDGKFMVMV 328 (415)
T ss_dssp TTSSCC---EECC-CSSSEEEEEEECTTSSEEEEE
T ss_pred CCCCCE---EEEe-cCCCcccCeEECCCCCEEEEE
Confidence 765432 1111 112234457889999754443
No 135
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.75 E-value=8.3e-06 Score=74.71 Aligned_cols=228 Identities=10% Similarity=0.016 Sum_probs=135.2
Q ss_pred cceEEEecCCCEEEEecCCeEEEEE-cCCceE-Eee----eecCccccCeEECCCCcEEEE-ECCCcEEEEe-cCC--cE
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLH-KNGTWE-NWK----LIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VT 148 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~-~~~----~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~g--~~ 148 (373)
-.++++.+++.+.+++.+|.|..++ .+++.. ... ...+... .+++.++|+++++ ...+.|..++ .++ ..
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~-~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVS-TVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 4568888899999999999999998 444321 111 1123455 8999999986654 5445577777 666 33
Q ss_pred EEeeccCCccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec---CCCCcceEE
Q 017317 149 VLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD---SLFFANGVA 224 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~---~~~~~~gi~ 224 (373)
.+..+ ...+..+++.+++ .++++.+. .+.|..+|..+++...... .......++
T Consensus 164 ~~~~h-----~~~V~~~~~~~~~~~~l~s~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 164 SYRAH-----AAQVTCVAASPHKDSVFLSCSE-----------------DNRILLWDTRCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp EECCC-----SSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTSSSCEEECC----CCCEEEEE
T ss_pred EEcCc-----CCceEEEEecCCCCCceeeecc-----------------ccccccccccccceeeeeecceeeccceeee
Confidence 33211 2356789999988 57666432 4678888887665433221 123356789
Q ss_pred EccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEE-ecCCCchhhhccCChHHHHHH
Q 017317 225 LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAI-LQLSSPGLEFVHTSKATKHLL 302 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~-~~~~~~~~~~~~~~p~~~~~~ 302 (373)
+++++..++++...++.|..||+...+. ...+. .-......+++.++|. +.++. ..+
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~~~--~~~~~-~h~~~v~~v~fsp~g~~~lasgs~D~------------------ 280 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKSTSC--VLSSA-VHSQCVTGLVFSPHSVPFLASLSEDC------------------ 280 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC--C--CEEEE-CCSSCEEEEEECSSSSCCEEEEETTS------------------
T ss_pred ecCCCCcceEEeccCCcEEEEECCCCcE--EEEEc-CCCCCEEEEEEccCCCeEEEEEeCCC------------------
Confidence 9987665777766777888898764322 12222 1122345678888885 43332 223
Q ss_pred HhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-C-CEEEEeeCCCCeEEEeeCC
Q 017317 303 AAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-D-DHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 303 ~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~vgs~~~~~i~~~~l~ 371 (373)
.|..+|.+...+..+... ...+..+.+. + .+|..+.-....|...+++
T Consensus 281 -----------------~i~vwd~~~~~~~~~~~H----~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 281 -----------------SLAVLDSSLSELFRSQAH----RDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp -----------------CEEEECTTCCEEEEECCC----SSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred -----------------eEEEEECCCCcEEEEcCC----CCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 356667554444444332 2457777775 3 3455433233446666554
No 136
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.75 E-value=2e-05 Score=70.66 Aligned_cols=181 Identities=12% Similarity=0.040 Sum_probs=110.9
Q ss_pred CCcceEEEecCCCEEEEecCCeEEEEEc-CCc----eEEee--eecCccccCeEECCCCcEE-EEECCCcEEEEe-cCC-
Q 017317 77 NGPEDVCVDRNGVLYTATRDGWIKRLHK-NGT----WENWK--LIGGDTLLGITTTQENEIL-VCDADKGLLKVT-EEG- 146 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~g~I~~~~~-~g~----~~~~~--~~~~~p~~gl~~d~~g~L~-va~~~~gl~~~~-~~g- 146 (373)
....++++.++|.+.+...+|.|..++. .++ ...+. ....... .+++.++++++ ++...+.+..++ .++
T Consensus 52 ~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~~ 130 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIR-SCKLLPDGCTLIVGGEASTLSIWDLAAPT 130 (337)
T ss_dssp SCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEE-EEEECTTSSEEEEEESSSEEEEEECCCC-
T ss_pred CceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEE-EEEEcCCCCEEEEEcCCCcEEEEECCCCC
Confidence 4567899999888775444899999983 322 12221 1223455 88999999754 455545567777 444
Q ss_pred cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcceEEE
Q 017317 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVAL 225 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~gi~~ 225 (373)
....... .+ ....+..+++.++|...++.+. .+.|..+|..+++....... ......+++
T Consensus 131 ~~~~~~~-~~-~~~~i~~~~~~~~~~~l~~~~~-----------------dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~ 191 (337)
T 1gxr_A 131 PRIKAEL-TS-SAPACYALAISPDSKVCFSCCS-----------------DGNIAVWDLHNQTLVRQFQGHTDGASCIDI 191 (337)
T ss_dssp -EEEEEE-EC-SSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred cceeeec-cc-CCCceEEEEECCCCCEEEEEeC-----------------CCcEEEEeCCCCceeeeeecccCceEEEEE
Confidence 3222211 11 1234678899999976555332 47788999887765444332 344578999
Q ss_pred ccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 226 SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 226 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
+++++.++.+. .++.|..|++...+. ...+ ...+....++++++|++.++..
T Consensus 192 ~~~~~~l~~~~-~dg~i~~~d~~~~~~--~~~~--~~~~~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 192 SNDGTKLWTGG-LDNTVRSWDLREGRQ--LQQH--DFTSQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp CTTSSEEEEEE-TTSEEEEEETTTTEE--EEEE--ECSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCEEEEEe-cCCcEEEEECCCCce--Eeee--cCCCceEEEEECCCCCEEEEEc
Confidence 99998666554 567899998754321 1111 1234456788889997655543
No 137
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.74 E-value=6.2e-06 Score=76.32 Aligned_cols=239 Identities=17% Similarity=0.084 Sum_probs=128.3
Q ss_pred eEeccCCcCCcceEEEecCCC-EEEEec----------CCeEEEEE-cCCceEEeeee--------cCccccCeEECCCC
Q 017317 69 TRLGEGILNGPEDVCVDRNGV-LYTATR----------DGWIKRLH-KNGTWENWKLI--------GGDTLLGITTTQEN 128 (373)
Q Consensus 69 ~~~~~g~~~~P~~ia~d~~G~-l~v~~~----------~g~I~~~~-~~g~~~~~~~~--------~~~p~~gl~~d~~g 128 (373)
.++..| ..|. ++++++|+ +|+++. ++.|.++| .+++....... ...|. ++++++||
T Consensus 73 ~~I~vG--~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~-~~a~spDG 148 (386)
T 3sjl_D 73 GMIDGG--FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW-MTSLTPDG 148 (386)
T ss_dssp EEEEEC--SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GEEECTTS
T ss_pred EEEECC--CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCc-eEEEcCCC
Confidence 344445 4585 99999775 888762 45688998 44543322222 23688 99999999
Q ss_pred c-EEEEEC--CCcEEEEe-cCC--cEEEeeccCCccccccce----eEEcCCCcEEEEeCCccccccccccccccccCCc
Q 017317 129 E-ILVCDA--DKGLLKVT-EEG--VTVLASHVNGSRINLADD----LIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHG 198 (373)
Q Consensus 129 ~-L~va~~--~~gl~~~~-~~g--~~~l~~~~~~~~~~~~~~----l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g 198 (373)
+ |||++. .+.+..+| .++ ...+. .++.....|.+ ++..+||++
T Consensus 149 k~lyVan~~~~~~VsVID~~t~~vv~tI~--v~g~~~~~P~g~~~~~~~~~DG~~------------------------- 201 (386)
T 3sjl_D 149 KTLLFYQFSPAPAVGVVDLEGKAFKRMLD--VPDCYHIFPTAPDTFFMHCRDGSL------------------------- 201 (386)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEEE--CCSEEEEEEEETTEEEEEETTSCE-------------------------
T ss_pred CEEEEEEcCCCCeEEEEECCCCcEEEEEE--CCCcceeecCCCceeEEECCCCCE-------------------------
Confidence 5 899975 35577888 566 33331 11111111111 244455543
Q ss_pred eEEEEeCCC-CeEEE----eecCCCCc--ceEEEc-cCCCEEEEEeCCCCeEEEEEecCCCCcc---eeEEec------C
Q 017317 199 KLLKYDPSL-NETSI----LLDSLFFA--NGVALS-KDEDYLVVCETFKFRCLKYWLKGESKEQ---TEIFVE------N 261 (373)
Q Consensus 199 ~l~~~d~~~-~~~~~----~~~~~~~~--~gi~~~-~dg~~l~v~~~~~~~i~~~~~~~~~~~~---~~~~~~------~ 261 (373)
..++..+ +++.. .......+ +-.+|+ ++|+.+|++. .++++.++..+..... ...+.. .
T Consensus 202 --~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~--~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~ 277 (386)
T 3sjl_D 202 --AKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVEALTEAERADGW 277 (386)
T ss_dssp --EEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEESSCHHHHHTTE
T ss_pred --EEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeC--CCEEEEEECCCCcceeecceeccccccccccc
Confidence 3333322 22111 11110111 223554 6886555554 4689999986653211 111110 0
Q ss_pred CCCCCCceeECCCC-CEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECC-CCcEEEEEeCCCC
Q 017317 262 LPGGPDNIKLAPDG-SFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNG 339 (373)
Q Consensus 262 ~~g~p~~i~~d~dG-~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g 339 (373)
.++....+++++++ ++|++....... - .-.+...+..+|. .++++..+....
T Consensus 278 ~p~g~q~~a~~~~~~~lyV~~~~~~~~----~---------------------hk~~~~~V~viD~~t~kv~~~i~vg~- 331 (386)
T 3sjl_D 278 RPGGWQQVAYHRALDRIYLLVDQRDEW----R---------------------HKTASRFVVVLDAKTGERLAKFEMGH- 331 (386)
T ss_dssp EECSSSCEEEETTTTEEEEEEEECCTT----C---------------------TTSCEEEEEEEETTTCCEEEEEEEEE-
T ss_pred cCCCcceeeECCCCCeEEEEecccccc----c---------------------cCCCCCEEEEEECCCCeEEEEEECCC-
Confidence 11222337888777 589987532100 0 0112245788884 678888775422
Q ss_pred ceecceeEEEEe-CC--EEEEeeCCCCeEEEeeCCC
Q 017317 340 KVMSFVTSALEF-DD--HLYLGSLNTNFIGKLPLKA 372 (373)
Q Consensus 340 ~~~~~~~~~~~~-~g--~L~vgs~~~~~i~~~~l~~ 372 (373)
.+.++..+ ++ .||+++..++.|+.++...
T Consensus 332 ----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t 363 (386)
T 3sjl_D 332 ----EIDSINVSQDEKPLLYALSTGDKTLYIHDAES 363 (386)
T ss_dssp ----EECEEEECSSSSCEEEEEETTTTEEEEEETTT
T ss_pred ----CcceEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 24455554 33 5888888889999998753
No 138
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.74 E-value=7.1e-07 Score=82.21 Aligned_cols=182 Identities=15% Similarity=0.063 Sum_probs=105.3
Q ss_pred cceEEEecCCCEEEE-ec------CCeEEEEE-cCCceE-----EeeeecCccccCeEECCCCcEEEEECCCcEEEEe-c
Q 017317 79 PEDVCVDRNGVLYTA-TR------DGWIKRLH-KNGTWE-----NWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-E 144 (373)
Q Consensus 79 P~~ia~d~~G~l~v~-~~------~g~I~~~~-~~g~~~-----~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~ 144 (373)
-.++++.|||.+.+. +. ++.|..++ .++... .......... .+++.+++.++++...+.|..++ .
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~-~~~~s~d~~~l~~s~dg~v~lWd~~ 123 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVT-DVAWVSEKGILVASDSGAVELWEIL 123 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEE-EEEEETTTEEEEEETTSCEEEC---
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEE-EEEEcCCCCEEEEECCCEEEEeecc
Confidence 467899999998854 33 56777776 333211 1111223355 88999999988887665566666 4
Q ss_pred CC-cEE-EeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcc
Q 017317 145 EG-VTV-LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFAN 221 (373)
Q Consensus 145 ~g-~~~-l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~ 221 (373)
++ ... ......+ ....+.++++.|+|+..++.+. .+.|..+|..+++....... ....+
T Consensus 124 ~~~~~~~~~~~~~~-h~~~V~~v~~spdg~~l~sgs~-----------------dg~v~iwd~~~~~~~~~~~~h~~~v~ 185 (357)
T 4g56_B 124 EKESLLVNKFAKYE-HDDIVKTLSVFSDGTQAVSGGK-----------------DFSVKVWDLSQKAVLKSYNAHSSEVN 185 (357)
T ss_dssp -----CCCCEEECC-CSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred ccceeEEEeeccCC-CCCCEEEEEECCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEcCCCCCEE
Confidence 44 211 1111111 1235788999999987776432 46788889887776544433 33457
Q ss_pred eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCC-CEEEE
Q 017317 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG-SFWIA 280 (373)
Q Consensus 222 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG-~lwva 280 (373)
.++++++++.++++...++.|..+++...+........ .....+..+++.+++ ++.++
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~-~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC-ASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT-TCCSCEEEEEECTTSTTEEEE
T ss_pred EEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec-cccccccchhhhhcccceEEE
Confidence 89999998767777666778888886543221111111 112334557777765 44443
No 139
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.74 E-value=3.8e-05 Score=69.85 Aligned_cols=185 Identities=13% Similarity=0.078 Sum_probs=112.5
Q ss_pred cCCcCCcceEEEecCCCEE-EEecCCeEEEEE-cCCce-EEeeeecCccccCeEECCCCcEEEE-ECCCcEEEEe-cCC-
Q 017317 73 EGILNGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTW-ENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG- 146 (373)
Q Consensus 73 ~g~~~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~-~~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~g- 146 (373)
.|....-.++++.++|.+. +++.+|.|..++ .+++. ..+........ .+++.++|++.++ ...+.+..++ .++
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVM-TCAYAPSGNYVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEE-EEEECTTSSEEEEEETTCEEEEEETTTCS
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEE-EEEECCCCCEEEEEeCCCeEEEEECccCC
Confidence 3444556788999988766 677899999999 44543 23322233455 8889999986654 4434455555 332
Q ss_pred --cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcceE
Q 017317 147 --VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGV 223 (373)
Q Consensus 147 --~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~gi 223 (373)
.+... ...+. ...+..+.+.+++.+..+.. .+.|..+|..+++......+ ......+
T Consensus 131 ~~~~~~~-~~~~h-~~~v~~~~~~~~~~l~s~s~------------------d~~i~~wd~~~~~~~~~~~~h~~~v~~~ 190 (340)
T 1got_B 131 GNVRVSR-ELAGH-TGYLSCCRFLDDNQIVTSSG------------------DTTCALWDIETGQQTTTFTGHTGDVMSL 190 (340)
T ss_dssp BSCEEEE-EEECC-SSCEEEEEEEETTEEEEEET------------------TSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred CcceeEE-EecCC-CccEEEEEECCCCcEEEEEC------------------CCcEEEEECCCCcEEEEEcCCCCceEEE
Confidence 22221 11111 12456777777887655543 36788889887765544333 2345689
Q ss_pred EEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 224 ALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 224 ~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
+++|+++ ++++...++.|..|++.... ....+. ........+++.++|++.++..
T Consensus 191 ~~~~~~~-~l~sg~~d~~v~~wd~~~~~--~~~~~~-~h~~~v~~v~~~p~~~~l~s~s 245 (340)
T 1got_B 191 SLAPDTR-LFVSGACDASAKLWDVREGM--CRQTFT-GHESDINAICFFPNGNAFATGS 245 (340)
T ss_dssp EECTTSS-EEEEEETTSCEEEEETTTCS--EEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred EECCCCC-EEEEEeCCCcEEEEECCCCe--eEEEEc-CCcCCEEEEEEcCCCCEEEEEc
Confidence 9999998 55555567788888875432 112222 2223456688999998766554
No 140
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.73 E-value=2.2e-05 Score=71.29 Aligned_cols=247 Identities=13% Similarity=-0.008 Sum_probs=138.5
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEE-ECC-----CcEEEEe-cCC-
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVC-DAD-----KGLLKVT-EEG- 146 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va-~~~-----~gl~~~~-~~g- 146 (373)
....++++.++|..+ +++.+|.|..++ .+++............ .+++.++++.+++ ... +.+..++ ..+
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVK-RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeE-EEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 445678898877655 677899999999 5555443333445566 8999999976654 333 3455565 322
Q ss_pred -cEEEeecc--------CCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCC-CeEEEeec-
Q 017317 147 -VTVLASHV--------NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL-NETSILLD- 215 (373)
Q Consensus 147 -~~~l~~~~--------~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~~~~~~~~- 215 (373)
...+.... .......+..++++++|...++.. ..|.|..+|..+ ++......
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~dg~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGH-----------------KDGKISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEE-----------------TTSEEEEEETTTTTEEEEEEEC
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEc-----------------CCCEEEEEECCCCcEeEEEEec
Confidence 11111100 000112567888999997655532 247899999876 44333332
Q ss_pred CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCC
Q 017317 216 SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTS 295 (373)
Q Consensus 216 ~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~ 295 (373)
.......++++++++.++.+. .++.|..|++..... ...+. .......++++++|.+.+..............
T Consensus 217 ~~~~v~~~~~~~~~~~l~~~~-~d~~i~v~d~~~~~~--~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-- 289 (369)
T 3zwl_B 217 HEKSISDMQFSPDLTYFITSS-RDTNSFLVDVSTLQV--LKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTS-- 289 (369)
T ss_dssp CSSCEEEEEECTTSSEEEEEE-TTSEEEEEETTTCCE--EEEEE--CSSCEEEEEECSSSSEEEEEECCC----------
T ss_pred CCCceeEEEECCCCCEEEEec-CCceEEEEECCCCce--eeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEe--
Confidence 334457899999999666554 567888998764321 12222 22345568889999765554432111000000
Q ss_pred hHHHHHHHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEe-CC-EEEEeeCCCCeEEEeeCC
Q 017317 296 KATKHLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEF-DD-HLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 296 p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~vgs~~~~~i~~~~l~ 371 (373)
.......+..++ ..++.+..+.... ..++.+... ++ .|..++. ...|...++.
T Consensus 290 ------------------~~~~~~~i~~~d~~~~~~~~~~~~~~----~~v~~~~~s~~~~~l~s~~~-dg~v~iw~~~ 345 (369)
T 3zwl_B 290 ------------------ANEGKFEARFYHKIFEEEIGRVQGHF----GPLNTVAISPQGTSYASGGE-DGFIRLHHFE 345 (369)
T ss_dssp -----------------------CEEEEEETTTCCEEEEEECCS----SCEEEEEECTTSSEEEEEET-TSEEEEEEEC
T ss_pred ------------------cCCCcceeEEEecCCCcchhheeccc----CcEEEEEECCCCCEEEEEcC-CCeEEEEECc
Confidence 011111345555 4567777776544 346777765 34 4555554 4457666654
No 141
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.72 E-value=1.9e-06 Score=79.51 Aligned_cols=101 Identities=10% Similarity=0.108 Sum_probs=66.5
Q ss_pred eeEEcCCC-cEEEEeC-CccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCCCe
Q 017317 164 DLIAATDG-SIYFSVA-STKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFR 241 (373)
Q Consensus 164 ~l~~~~dG-~l~v~~~-~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~ 241 (373)
.+++++|| ++|++.. ....+. .......|+.+|..+++......... |.+++++|||++||+++. +.
T Consensus 258 ~~a~~~dg~~lyv~~~~~~~~~~--------~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~--~~ 326 (361)
T 2oiz_A 258 LVGLHRASGRMYVFMHPDGKEGT--------HKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG--GN 326 (361)
T ss_dssp CEEEETTTTEEEEEEESSCCTTC--------TTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS--SC
T ss_pred EEEEecCCCeEEEEEccCCCccc--------ccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC--Ce
Confidence 37888885 6888753 100000 00123589999999887665444444 999999999999999874 78
Q ss_pred EEEEEecCCCCcceeEEecCCCCCCCceeECCCCC
Q 017317 242 CLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS 276 (373)
Q Consensus 242 i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~ 276 (373)
|..||....++.....+ ......|.+++++++|+
T Consensus 327 v~v~D~~t~~l~~~~~i-~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 327 VNVYDISQPEPKLLRTI-EGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEECSSSSCEEEEEE-TTSCSSEEEEEECCCSC
T ss_pred EEEEECCCCcceeeEEe-ccCCCCcEEEEecCCCC
Confidence 99998654321222222 12345799999999985
No 142
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.71 E-value=1e-06 Score=85.30 Aligned_cols=192 Identities=10% Similarity=0.088 Sum_probs=114.0
Q ss_pred CCEEEEe-cCCeEEEEEc-CCceEEeeee--cCccccCeEE-C-CCC-cEEEEEC-----------------CCc-EEEE
Q 017317 88 GVLYTAT-RDGWIKRLHK-NGTWENWKLI--GGDTLLGITT-T-QEN-EILVCDA-----------------DKG-LLKV 142 (373)
Q Consensus 88 G~l~v~~-~~g~I~~~~~-~g~~~~~~~~--~~~p~~gl~~-d-~~g-~L~va~~-----------------~~g-l~~~ 142 (373)
..+|+.+ .+++|.++|. ..+...+... ...|+ |+++ . +++ .+|++.. +.+ +-.+
T Consensus 102 ~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~ph-g~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvI 180 (595)
T 1fwx_A 102 RFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIH-GLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAV 180 (595)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEE-EEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCc-ceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEE
Confidence 4588866 5788999994 3343332222 35689 9997 3 666 5777742 112 3334
Q ss_pred e-cCCcEEEeeccCCccccccceeEEcCCC-cEEEEeCCcccccc---------ccc--------cccc-cc--cCCceE
Q 017317 143 T-EEGVTVLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLH---------NWG--------LDLL-EA--KPHGKL 200 (373)
Q Consensus 143 ~-~~g~~~l~~~~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~---------~~~--------~~~~-~~--~~~g~l 200 (373)
| .+. ++...-.-+ ..+..+++++|| .+|+++..++.+.. ++. .... .+ ...+.|
T Consensus 181 D~~t~-~v~~qI~Vg---g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 181 DADKW-EVAWQVLVS---GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp ETTTT-EEEEEEEES---SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred ECCCC-eEEEEEEeC---CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 4 332 222221111 146788999998 57877755432211 000 0000 00 112458
Q ss_pred EEEeCCC--CeE-EEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCC------CCc-ceeEEec-CCCCCCCce
Q 017317 201 LKYDPSL--NET-SILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE------SKE-QTEIFVE-NLPGGPDNI 269 (373)
Q Consensus 201 ~~~d~~~--~~~-~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~------~~~-~~~~~~~-~~~g~p~~i 269 (373)
-.+|..+ ++. .........|.|+.++|||+++|+++...+.+..|+.... ++. ...+..+ .....|..+
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~ 336 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHT 336 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEE
T ss_pred EEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceE
Confidence 8899886 332 2233334689999999999999999999999999997632 111 1112222 233479999
Q ss_pred eECCCCCEEEEEecC
Q 017317 270 KLAPDGSFWIAILQL 284 (373)
Q Consensus 270 ~~d~dG~lwva~~~~ 284 (373)
++|++|++|++..-.
T Consensus 337 aF~~dG~aY~t~~ld 351 (595)
T 1fwx_A 337 AFDGRGNAYTSLFLD 351 (595)
T ss_dssp EECTTSEEEEEETTT
T ss_pred EECCCCeEEEEEecC
Confidence 999999989987643
No 143
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.70 E-value=4.1e-06 Score=76.74 Aligned_cols=181 Identities=12% Similarity=0.032 Sum_probs=105.8
Q ss_pred cceEEEecCCCEEEEecCC-------eEEEEEc--CC----ceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-c
Q 017317 79 PEDVCVDRNGVLYTATRDG-------WIKRLHK--NG----TWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-E 144 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g-------~I~~~~~--~g----~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~ 144 (373)
-+++++.+||.+.++..++ .+..++. .+ ............. .+++.+++.|.++...+.|..+| .
T Consensus 33 v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~d~~l~~~s~dg~v~lWd~~ 111 (344)
T 4gqb_B 33 LEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVA-DLTWVGERGILVASDSGAVELWELD 111 (344)
T ss_dssp EEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEE-EEEEETTTEEEEEETTSEEEEEEEC
T ss_pred EEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEE-EEEEeCCCeEEEEECCCEEEEEecc
Confidence 3578888999988765433 3333331 11 0111111122345 78898998888887665566677 5
Q ss_pred CC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcc
Q 017317 145 EG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFAN 221 (373)
Q Consensus 145 ~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~ 221 (373)
++ .........+ ....+.++++.++|+..++.+. .+.|..+|..+++......+ .....
T Consensus 112 ~~~~~~~~~~~~~~-H~~~V~~v~~spdg~~l~sgs~-----------------d~~i~iwd~~~~~~~~~~~~h~~~V~ 173 (344)
T 4gqb_B 112 ENETLIVSKFCKYE-HDDIVSTVSVLSSGTQAVSGSK-----------------DICIKVWDLAQQVVLSSYRAHAAQVT 173 (344)
T ss_dssp TTSSCEEEEEEEEC-CSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred CCCceeEeeccccC-CCCCEEEEEECCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEcCcCCceE
Confidence 55 3332211111 1235789999999987776543 46788889887776554443 23446
Q ss_pred eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCC-CCCCceeECCCC-CEEEE
Q 017317 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLP-GGPDNIKLAPDG-SFWIA 280 (373)
Q Consensus 222 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d~dG-~lwva 280 (373)
.+++++++..++++...++.|..+|+...+.. ..+..... ..+..+++.+++ ++.++
T Consensus 174 ~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~l~s 232 (344)
T 4gqb_B 174 CVAASPHKDSVFLSCSEDNRILLWDTRCPKPA--SQIGCSAPGYLPTSLAWHPQQSEVFVF 232 (344)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTSSSCE--EECC----CCCEEEEEECSSCTTEEEE
T ss_pred EEEecCCCCCceeeecccccccccccccccee--eeeecceeeccceeeeecCCCCcceEE
Confidence 78999998778887777788999987543211 11111111 234456777644 56554
No 144
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.70 E-value=1.7e-05 Score=73.07 Aligned_cols=89 Identities=11% Similarity=0.110 Sum_probs=54.0
Q ss_pred CCEEEEe------cCCeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEEC----------CCcEEEEe-cCC--
Q 017317 88 GVLYTAT------RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDA----------DKGLLKVT-EEG-- 146 (373)
Q Consensus 88 G~l~v~~------~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~----------~~gl~~~~-~~g-- 146 (373)
..+|+.+ .++.|+++| .+++..........| ++++++||+ ||+++. ...|..+| .++
T Consensus 16 ~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~ 93 (361)
T 2oiz_A 16 NRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTF 93 (361)
T ss_dssp GEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCE
T ss_pred CEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcE
Confidence 4677754 257899999 556554322222333 789999995 899863 12377788 454
Q ss_pred cEEEeeccC-CccccccceeEEcCCC-cEEEEeC
Q 017317 147 VTVLASHVN-GSRINLADDLIAATDG-SIYFSVA 178 (373)
Q Consensus 147 ~~~l~~~~~-~~~~~~~~~l~~~~dG-~l~v~~~ 178 (373)
...+..... ......|.++++++|| .||+++.
T Consensus 94 ~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~ 127 (361)
T 2oiz_A 94 EKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNA 127 (361)
T ss_dssp EEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEE
T ss_pred EEEEEcCccccccCCCcceEEECCCCCEEEEECC
Confidence 333321100 0012468899999999 5888863
No 145
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.70 E-value=3.6e-06 Score=85.03 Aligned_cols=137 Identities=12% Similarity=-0.006 Sum_probs=86.3
Q ss_pred CCcceEEEecCCC-EEEEec-CC-----eEEEEE-cCCceEEeeeec-C------------------------ccccCeE
Q 017317 77 NGPEDVCVDRNGV-LYTATR-DG-----WIKRLH-KNGTWENWKLIG-G------------------------DTLLGIT 123 (373)
Q Consensus 77 ~~P~~ia~d~~G~-l~v~~~-~g-----~I~~~~-~~g~~~~~~~~~-~------------------------~p~~gl~ 123 (373)
..+.++++.+||+ |+++.. ++ .|+.++ .+|+........ . ... +++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~ 115 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV-DYQ 115 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC-CCE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc-eeE
Confidence 3477889999987 445555 66 799998 455554433221 1 145 899
Q ss_pred ECCCCcE-EEEECCCcEEEEe-cCCc--EEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCc
Q 017317 124 TTQENEI-LVCDADKGLLKVT-EEGV--TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHG 198 (373)
Q Consensus 124 ~d~~g~L-~va~~~~gl~~~~-~~g~--~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g 198 (373)
+++||+. +++.. ..|+.++ .++. +.. .... ....+..+++.|||+ |.++. .+
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~--~l~~-~~~~~~~~~~SPDG~~la~~~-------------------~~ 172 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVR--QLTH-GEGFATDAKLSPKGGFVSFIR-------------------GR 172 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCC--BCCC-SSSCEEEEEECTTSSEEEEEE-------------------TT
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEE--Eccc-CCcccccccCCCCCCEEEEEe-------------------CC
Confidence 9999974 44443 5678887 4331 111 0111 112467889999997 44442 14
Q ss_pred eEEEEeCCCCeEEEeecCCCC-----------------cceEEEccCCCEEEEEeC
Q 017317 199 KLLKYDPSLNETSILLDSLFF-----------------ANGVALSKDEDYLVVCET 237 (373)
Q Consensus 199 ~l~~~d~~~~~~~~~~~~~~~-----------------~~gi~~~~dg~~l~v~~~ 237 (373)
.|+.+|.++++...+...... ..+++|+|||+.|+++..
T Consensus 173 ~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 173 NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 799999888776654332221 467999999998888753
No 146
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.70 E-value=1.2e-05 Score=73.29 Aligned_cols=219 Identities=12% Similarity=0.057 Sum_probs=133.0
Q ss_pred cceEEEecCCCEE-EEecCCeEEEEEc-CC--ceEE---eeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC--cE
Q 017317 79 PEDVCVDRNGVLY-TATRDGWIKRLHK-NG--TWEN---WKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VT 148 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~~g~I~~~~~-~g--~~~~---~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g--~~ 148 (373)
..++++.++|.+. ++..++.|..++. .+ .... +....+... .+.+.+++.+..+...+.+..++ .++ ..
T Consensus 100 v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~ 178 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS-CCRFLDDNQIVTSSGDTTCALWDIETGQQTT 178 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEE-EEEEEETTEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEE-EEEECCCCcEEEEECCCcEEEEECCCCcEEE
Confidence 4567788887766 6778888888883 22 1121 112223344 66777778887777766677788 666 22
Q ss_pred EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcceEEEcc
Q 017317 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVALSK 227 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~gi~~~~ 227 (373)
.+. + ....+..+++.++|.++++.+. .+.|..+|..+++......+ ....+.++|+|
T Consensus 179 ~~~----~-h~~~v~~~~~~~~~~~l~sg~~-----------------d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p 236 (340)
T 1got_B 179 TFT----G-HTGDVMSLSLAPDTRLFVSGAC-----------------DASAKLWDVREGMCRQTFTGHESDINAICFFP 236 (340)
T ss_dssp EEC----C-CSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCSEEEEECCCSSCEEEEEECT
T ss_pred EEc----C-CCCceEEEEECCCCCEEEEEeC-----------------CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcC
Confidence 221 1 1124678999999988777543 46788888877665443332 33457899999
Q ss_pred CCCEEEEEeCCCCeEEEEEecCCCCcceeEEec-CCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcc
Q 017317 228 DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE-NLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFP 306 (373)
Q Consensus 228 dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~ 306 (373)
+++.++ +...++.|..|++.... ....+.. ........++++++|++.++....
T Consensus 237 ~~~~l~-s~s~d~~v~iwd~~~~~--~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d---------------------- 291 (340)
T 1got_B 237 NGNAFA-TGSDDATCRLFDLRADQ--ELMTYSHDNIICGITSVSFSKSGRLLLAGYDD---------------------- 291 (340)
T ss_dssp TSSEEE-EEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETT----------------------
T ss_pred CCCEEE-EEcCCCcEEEEECCCCc--EEEEEccCCcccceEEEEECCCCCEEEEECCC----------------------
Confidence 998554 44556778888865421 1112211 111123457889999877665432
Q ss_pred hhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEeC-C-EEEEeeCC
Q 017317 307 KLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFD-D-HLYLGSLN 361 (373)
Q Consensus 307 ~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~-g-~L~vgs~~ 361 (373)
+.+..+| ..++.+..+.... ..++.+.+.. + .|.-|+..
T Consensus 292 ------------~~i~vwd~~~~~~~~~~~~h~----~~v~~~~~s~dg~~l~s~s~D 333 (340)
T 1got_B 292 ------------FNCNVWDALKADRAGVLAGHD----NRVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp ------------SEEEEEETTTCCEEEEEECCS----SCEEEEEECTTSSCEEEEETT
T ss_pred ------------CeEEEEEcccCcEeeEeecCC----CcEEEEEEcCCCCEEEEEcCC
Confidence 2356666 4577777776544 3467777763 3 45555543
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.70 E-value=4.7e-06 Score=73.16 Aligned_cols=180 Identities=12% Similarity=0.025 Sum_probs=110.2
Q ss_pred CCcceEEEecCCCEEEEecCCeEEEEEc-C-CceEEeeeec--CccccCeEECCCCcEEEE-EC----CCcEEEEe-cCC
Q 017317 77 NGPEDVCVDRNGVLYTATRDGWIKRLHK-N-GTWENWKLIG--GDTLLGITTTQENEILVC-DA----DKGLLKVT-EEG 146 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~g~I~~~~~-~-g~~~~~~~~~--~~p~~gl~~d~~g~L~va-~~----~~gl~~~~-~~g 146 (373)
....++++.++|..++...++.|+.++. + ++........ ..+. .+++.++|+.++. .. ...|+.++ .++
T Consensus 42 ~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~ 120 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNN-DHGISPDGALYAISDKVEFGKSAIYLLPSTGG 120 (297)
T ss_dssp SCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCS-CCEECTTSSEEEEEECTTTSSCEEEEEETTCC
T ss_pred cceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEecccccccccc-ceEECCCCCEEEEEEeCCCCcceEEEEECCCC
Confidence 4467889999998775556889999994 4 5544433222 3456 8999999975443 31 24577777 445
Q ss_pred -cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEE
Q 017317 147 -VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVA 224 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~ 224 (373)
.+.+... .....+++.+||+ |+++... ...-.||.++..+++...+.........++
T Consensus 121 ~~~~~~~~------~~~~~~~~spdg~~l~~~~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 179 (297)
T 2ojh_A 121 TPRLMTKN------LPSYWHGWSPDGKSFTYCGIR---------------DQVFDIYSMDIDSGVETRLTHGEGRNDGPD 179 (297)
T ss_dssp CCEECCSS------SSEEEEEECTTSSEEEEEEEE---------------TTEEEEEEEETTTCCEEECCCSSSCEEEEE
T ss_pred ceEEeecC------CCccceEECCCCCEEEEEECC---------------CCceEEEEEECCCCcceEcccCCCccccce
Confidence 4443221 1256788999996 5544321 112368888887777766555445567899
Q ss_pred EccCCCEEEEEeC--CCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEE-EEEe
Q 017317 225 LSKDEDYLVVCET--FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFW-IAIL 282 (373)
Q Consensus 225 ~~~dg~~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lw-va~~ 282 (373)
+++|++.++++.. ...+|+.++..+.. ...+. ........++++++|+.. ++..
T Consensus 180 ~s~dg~~l~~~~~~~~~~~i~~~~~~~~~---~~~~~-~~~~~~~~~~~s~dg~~l~~~~~ 236 (297)
T 2ojh_A 180 YSPDGRWIYFNSSRTGQMQIWRVRVDGSS---VERIT-DSAYGDWFPHPSPSGDKVVFVSY 236 (297)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTSSC---EEECC-CCSEEEEEEEECTTSSEEEEEEE
T ss_pred ECCCCCEEEEEecCCCCccEEEECCCCCC---cEEEe-cCCcccCCeEECCCCCEEEEEEc
Confidence 9999998887754 33456666544322 11221 111223457788999754 4443
No 148
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.69 E-value=1.3e-05 Score=74.35 Aligned_cols=231 Identities=10% Similarity=0.035 Sum_probs=136.8
Q ss_pred CcceEEEecCCCEE-EEecCCeEEEEEcCCceEE-eeeecCccccCeEECCCCc-EEEEECCCcEEEEe-cCC--cEEEe
Q 017317 78 GPEDVCVDRNGVLY-TATRDGWIKRLHKNGTWEN-WKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG--VTVLA 151 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~g~I~~~~~~g~~~~-~~~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g--~~~l~ 151 (373)
...++++.++|.++ ++..+|.|..++.+++... +........ .+++.++++ |+++...+.+..++ .++ ...+.
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIV-SVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEE-EEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEE-EEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 45678899888755 7778899999996665433 322234456 899999987 45556556677777 566 23222
Q ss_pred eccCC----------ccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec-CCCCc
Q 017317 152 SHVNG----------SRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SLFFA 220 (373)
Q Consensus 152 ~~~~~----------~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~~~~ 220 (373)
..... .....+..+.+.+++.++++.. .+.|..+|..+++...... .....
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~g~i~~~d~~~~~~~~~~~~~~~~i 250 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP------------------KGAIFVYQITEKTPTGKLIGHHGPI 250 (425)
T ss_dssp CC---------------CCCBSCCEEEETTEEEEECG------------------GGCEEEEETTCSSCSEEECCCSSCE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC------------------CCeEEEEEcCCCceeeeeccCCCce
Confidence 11100 0001166788888888766643 3788889887665433222 22344
Q ss_pred ceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHH
Q 017317 221 NGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKH 300 (373)
Q Consensus 221 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~ 300 (373)
..++++++++.++.+. .++.|..|++..... ...+. ........+++.++|.++.+...+
T Consensus 251 ~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~-~~~~~i~~~~~~~~~~l~~~~~d~---------------- 310 (425)
T 1r5m_A 251 SVLEFNDTNKLLLSAS-DDGTLRIWHGGNGNS--QNCFY-GHSQSIVSASWVGDDKVISCSMDG---------------- 310 (425)
T ss_dssp EEEEEETTTTEEEEEE-TTSCEEEECSSSBSC--SEEEC-CCSSCEEEEEEETTTEEEEEETTS----------------
T ss_pred EEEEECCCCCEEEEEc-CCCEEEEEECCCCcc--ceEec-CCCccEEEEEECCCCEEEEEeCCC----------------
Confidence 6799999999555554 566788888654321 12221 222345667888888333333333
Q ss_pred HHHhcchhhhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeEEEEe-C-CEEEEeeCCCCeEEEeeCC
Q 017317 301 LLAAFPKLIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTSALEF-D-DHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~vgs~~~~~i~~~~l~ 371 (373)
.+..++. +++.+..+....+ .+..+... + ..|..++. ...|..+++.
T Consensus 311 -------------------~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~~~~-dg~i~i~~~~ 360 (425)
T 1r5m_A 311 -------------------SVRLWSLKQNTLLALSIVDGV----PIFAGRISQDGQKYAVAFM-DGQVNVYDLK 360 (425)
T ss_dssp -------------------EEEEEETTTTEEEEEEECTTC----CEEEEEECTTSSEEEEEET-TSCEEEEECH
T ss_pred -------------------cEEEEECCCCcEeEecccCCc----cEEEEEEcCCCCEEEEEEC-CCeEEEEECC
Confidence 4666663 5666666654332 45666665 2 35666664 3457766653
No 149
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.66 E-value=1.3e-05 Score=73.83 Aligned_cols=186 Identities=10% Similarity=-0.023 Sum_probs=114.9
Q ss_pred cCCcceEEEecCC-C-EEEEecCCeEEEEEc-CCceEEeee---ecCccccCeEECC-CCcE-EEEECCCcEEEEe-cCC
Q 017317 76 LNGPEDVCVDRNG-V-LYTATRDGWIKRLHK-NGTWENWKL---IGGDTLLGITTTQ-ENEI-LVCDADKGLLKVT-EEG 146 (373)
Q Consensus 76 ~~~P~~ia~d~~G-~-l~v~~~~g~I~~~~~-~g~~~~~~~---~~~~p~~gl~~d~-~g~L-~va~~~~gl~~~~-~~g 146 (373)
-....++++.++| . |.+++.+|.|..++. +++...... ..+... ++++.+ ++++ +.+...+.+..++ .+.
T Consensus 73 ~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~~~ 151 (383)
T 3ei3_B 73 DRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAIT-GMKFNQFNTNQLFVSSIRGATTLRDFSGS 151 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEE-EEEEETTEEEEEEEEETTTEEEEEETTSC
T ss_pred CCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCcee-EEEeCCCCCCEEEEEeCCCEEEEEECCCC
Confidence 3456778899887 4 557888999999993 444333322 234455 889988 5554 4455545566677 444
Q ss_pred -cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEE
Q 017317 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVAL 225 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~ 225 (373)
...+.... + ....+..+++.++|.+.++.+. .+.|..+|..+.....+.........+++
T Consensus 152 ~~~~~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~h~~~v~~~~~ 212 (383)
T 3ei3_B 152 VIQVFAKTD-S-WDYWYCCVDVSVSRQMLATGDS-----------------TGRLLLLGLDGHEIFKEKLHKAKVTHAEF 212 (383)
T ss_dssp EEEEEECCC-C-SSCCEEEEEEETTTTEEEEEET-----------------TSEEEEEETTSCEEEEEECSSSCEEEEEE
T ss_pred ceEEEeccC-C-CCCCeEEEEECCCCCEEEEECC-----------------CCCEEEEECCCCEEEEeccCCCcEEEEEE
Confidence 44433211 1 1134678999999986665432 47888899865555554444455678999
Q ss_pred ccCCCEEEEEeCCCCeEEEEEecCCCC-cceeEEecCCCCCCCceeECC-CCCEEEEEe
Q 017317 226 SKDEDYLVVCETFKFRCLKYWLKGESK-EQTEIFVENLPGGPDNIKLAP-DGSFWIAIL 282 (373)
Q Consensus 226 ~~dg~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~g~p~~i~~d~-dG~lwva~~ 282 (373)
+++++.++++...++.|..|++...+. ....... ...+....+++++ +|++.++..
T Consensus 213 ~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~ 270 (383)
T 3ei3_B 213 NPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTD 270 (383)
T ss_dssp CSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEE
T ss_pred CCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEc
Confidence 999985555555677899999864221 1111111 1234456788888 887655543
No 150
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.65 E-value=2.7e-05 Score=73.74 Aligned_cols=178 Identities=13% Similarity=0.130 Sum_probs=106.1
Q ss_pred ceEEEecCCCEEEEecCCeEEEEE-cCCc---e-EEeeee----------------------------------------
Q 017317 80 EDVCVDRNGVLYTATRDGWIKRLH-KNGT---W-ENWKLI---------------------------------------- 114 (373)
Q Consensus 80 ~~ia~d~~G~l~v~~~~g~I~~~~-~~g~---~-~~~~~~---------------------------------------- 114 (373)
.++++.++|++.++..++.|..++ .+|+ . ..+...
T Consensus 8 ~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (450)
T 2vdu_B 8 QNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRT 87 (450)
T ss_dssp CEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC---------------------------------------
T ss_pred EEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcccccc
Confidence 467888899977777788999988 5665 1 111100
Q ss_pred --------------cCccccCeEECCCCcEE-EEE-CCCcEEEEe-c--CC--cEEEeeccCCccccccceeEEcCCCcE
Q 017317 115 --------------GGDTLLGITTTQENEIL-VCD-ADKGLLKVT-E--EG--VTVLASHVNGSRINLADDLIAATDGSI 173 (373)
Q Consensus 115 --------------~~~p~~gl~~d~~g~L~-va~-~~~gl~~~~-~--~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l 173 (373)
.+... +++++++|+.+ ++. ..+.+..++ . ++ ...+..... ...+.+++++++|..
T Consensus 88 ~~~~~~~~~~~~~~~~~v~-~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 88 AAKVPSPGLGAPPIYSYIR-NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCF---SKRPNAISIAEDDTT 163 (450)
T ss_dssp ------------CCCCCEE-EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEEC---SSCEEEEEECTTSSE
T ss_pred CccccCCCCCCCccCCceE-EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccC---CCCceEEEEcCCCCE
Confidence 00245 78899999864 443 334466666 5 55 344322111 135678999999965
Q ss_pred EEEeCCccccccccccccccccCCceEEEEeCCCCeEE-----EeecCCCCcceEEEccC---CCEEEEEeCCCCeEEEE
Q 017317 174 YFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-----ILLDSLFFANGVALSKD---EDYLVVCETFKFRCLKY 245 (373)
Q Consensus 174 ~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-----~~~~~~~~~~gi~~~~d---g~~l~v~~~~~~~i~~~ 245 (373)
.++.. ..|.++.++..+++.. .+.........++|+|+ ++.++.+ ..++.|..|
T Consensus 164 l~~~~-----------------~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~-~~d~~i~vw 225 (450)
T 2vdu_B 164 VIIAD-----------------KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITS-DRDEHIKIS 225 (450)
T ss_dssp EEEEE-----------------TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEE-ETTSCEEEE
T ss_pred EEEEe-----------------CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEE-cCCCcEEEE
Confidence 54432 2478888887655432 11222234567899999 7755544 456789999
Q ss_pred EecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 246 WLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
++..... ...+...-.+....+++. +|++.++..
T Consensus 226 d~~~~~~--~~~~~~~h~~~v~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 226 HYPQCFI--VDKWLFGHKHFVSSICCG-KDYLLLSAG 259 (450)
T ss_dssp EESCTTC--EEEECCCCSSCEEEEEEC-STTEEEEEE
T ss_pred ECCCCce--eeeeecCCCCceEEEEEC-CCCEEEEEe
Confidence 8764321 222221222345678888 888666544
No 151
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.65 E-value=0.0001 Score=66.88 Aligned_cols=185 Identities=15% Similarity=0.132 Sum_probs=108.9
Q ss_pred cCCcceEEEecCCCEE-EEecCCeEEEEE-cCCceEE-eeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC--cE
Q 017317 76 LNGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG--VT 148 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g--~~ 148 (373)
-....++++.++|.+. +++.+|.|..++ .+++... +....+... ++++.+++++++ +...+.+..++ .++ ..
T Consensus 32 ~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 32 ERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIW-SIDVDCFTKYCVTGSADYSIKLWDVSNGQCVA 110 (369)
T ss_dssp SSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 3556789999988755 677899999998 5555433 322334456 899999887555 45444577777 556 33
Q ss_pred EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe----E--------EEeec-
Q 017317 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE----T--------SILLD- 215 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~----~--------~~~~~- 215 (373)
.+. . ...+..+++.++|...++.... .....+.|..+|..++. . ..+..
T Consensus 111 ~~~--~----~~~v~~~~~~~~~~~l~~~~~~------------~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 172 (369)
T 3zwl_B 111 TWK--S----PVPVKRVEFSPCGNYFLAILDN------------VMKNPGSINIYEIERDSATHELTKVSEEPIHKIITH 172 (369)
T ss_dssp EEE--C----SSCEEEEEECTTSSEEEEEECC------------BTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECC
T ss_pred Eee--c----CCCeEEEEEccCCCEEEEecCC------------ccCCCCEEEEEEecCCccceeecccccceeeeccCC
Confidence 332 1 1346789999999766654320 00112456555543221 0 11111
Q ss_pred -CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 216 -SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 216 -~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
.......++++++++.++++. .++.|..|++.... .....+. ...+....++++++|++.++..
T Consensus 173 ~~~~~~~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~-~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 173 EGLDAATVAGWSTKGKYIIAGH-KDGKISKYDVSNNY-EYVDSID-LHEKSISDMQFSPDLTYFITSS 237 (369)
T ss_dssp TTCCCEEEEEECGGGCEEEEEE-TTSEEEEEETTTTT-EEEEEEE-CCSSCEEEEEECTTSSEEEEEE
T ss_pred cCccceeEEEEcCCCCEEEEEc-CCCEEEEEECCCCc-EeEEEEe-cCCCceeEEEECCCCCEEEEec
Confidence 112456789999999666654 56789999875421 1122222 2233456788899998655543
No 152
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.65 E-value=7.4e-06 Score=82.69 Aligned_cols=198 Identities=13% Similarity=0.054 Sum_probs=110.0
Q ss_pred cceEEEecCCCEEEEecCCeEEEEE-cCC---ceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC-cEEEee
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLH-KNG---TWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLAS 152 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~-~~g---~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l~~ 152 (373)
..++++.+||+..+...++.|+.++ .++ +...+........ .+++.+||+..+......|+.++ .++ ...+..
T Consensus 111 v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~-~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFAT-DAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp SCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEE-EEEECTTSSEEEEEETTEEEEEETTTTEEEECCC
T ss_pred cceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccc-cccCCCCCCEEEEEeCCcEEEEecCCCCEEEecc
Confidence 4678899999855433348999999 444 4444433334566 88999999844433345688888 566 444322
Q ss_pred ccCCc------------cccccceeEEcCCCc-EEEEeCCcccccccc----------------ccccccccCCceEEEE
Q 017317 153 HVNGS------------RINLADDLIAATDGS-IYFSVASTKFGLHNW----------------GLDLLEAKPHGKLLKY 203 (373)
Q Consensus 153 ~~~~~------------~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~----------------~~~~~~~~~~g~l~~~ 203 (373)
..... .+..+.+++++|||+ |+++..... ....+ .....+......|+.+
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~ 268 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDES-PVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVI 268 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECT-TSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEE
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCC-CCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEE
Confidence 11100 011246789999995 666532110 00000 0000001112378889
Q ss_pred eCCC-CeEEEeecC---CCCcceEEEccCCCEEEEEeC----CCCeEEEEEecCCCCcceeEEecCCCC---CCCceeEC
Q 017317 204 DPSL-NETSILLDS---LFFANGVALSKDEDYLVVCET----FKFRCLKYWLKGESKEQTEIFVENLPG---GPDNIKLA 272 (373)
Q Consensus 204 d~~~-~~~~~~~~~---~~~~~gi~~~~dg~~l~v~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~g---~p~~i~~d 272 (373)
|.++ ++...+... ......++| |||+.|+++.. ....|+.+++.+..... .+.....+ ....+++.
T Consensus 269 d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~--~~~~~~~~~~~~~~~~~~s 345 (741)
T 2ecf_A 269 SPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRV--LAHETSPTWVPLHNSLRFL 345 (741)
T ss_dssp CSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEE--EEEEECSSCCCCCSCCEEC
T ss_pred ECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEE--EEEcCCCCcCCcCCceEEC
Confidence 9887 766554321 233467899 99998887653 23467777765433221 11111111 23578889
Q ss_pred CCCCEEEEE
Q 017317 273 PDGSFWIAI 281 (373)
Q Consensus 273 ~dG~lwva~ 281 (373)
+||+++++.
T Consensus 346 pdg~~~~~~ 354 (741)
T 2ecf_A 346 DDGSILWSS 354 (741)
T ss_dssp TTSCEEEEE
T ss_pred CCCeEEEEe
Confidence 999855544
No 153
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.64 E-value=6.5e-05 Score=69.80 Aligned_cols=147 Identities=15% Similarity=0.128 Sum_probs=91.7
Q ss_pred cceEEEecCCCEE-EEecCCeEEEEE-cCCceEEeee-ecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC-cEEEee
Q 017317 79 PEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG-VTVLAS 152 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g-~~~l~~ 152 (373)
..++++.++|.+. ++..++.|..++ .+++...... ...... .+++.++|+.++ +...+.+..++ .++ ......
T Consensus 126 v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~ 204 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY-SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS 204 (393)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEE-EEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE
Confidence 3578888988766 677899999999 4444332222 233455 899999987554 45445566677 666 322211
Q ss_pred ccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec--------CCCCcceE
Q 017317 153 HVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD--------SLFFANGV 223 (373)
Q Consensus 153 ~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--------~~~~~~gi 223 (373)
. ...+..+++.+ +|++.++.+. .+.|..+|..+++...... .......+
T Consensus 205 ~-----~~~v~~~~~~~~~~~~l~~~s~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v 262 (393)
T 1erj_A 205 I-----EDGVTTVAVSPGDGKYIAAGSL-----------------DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSV 262 (393)
T ss_dssp C-----SSCEEEEEECSTTCCEEEEEET-----------------TSCEEEEETTTCCEEEEEC------CCCSSCEEEE
T ss_pred c-----CCCcEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEE
Confidence 1 12456788888 7877666432 4678888887665433221 11234679
Q ss_pred EEccCCCEEEEEeCCCCeEEEEEecC
Q 017317 224 ALSKDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 224 ~~~~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
+|+++++.++ +...++.|..|++..
T Consensus 263 ~~~~~g~~l~-s~s~d~~v~~wd~~~ 287 (393)
T 1erj_A 263 VFTRDGQSVV-SGSLDRSVKLWNLQN 287 (393)
T ss_dssp EECTTSSEEE-EEETTSEEEEEEC--
T ss_pred EECCCCCEEE-EEeCCCEEEEEECCC
Confidence 9999999554 445667888888753
No 154
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.64 E-value=0.00015 Score=64.74 Aligned_cols=150 Identities=17% Similarity=0.156 Sum_probs=97.0
Q ss_pred cCCcceEEEecCCCEE-EEecCCeEEEEE-cCCceE-EeeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC--cE
Q 017317 76 LNGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG--VT 148 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g--~~ 148 (373)
-....++++.++|++. ++..++.|..++ .+++.. .+........ .+++.+++++++ +...+.+..++ .++ ..
T Consensus 65 ~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~ 143 (312)
T 4ery_A 65 KLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLK 143 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEE
Confidence 3446778899988766 677899999998 445432 3332234455 888999887655 45555577777 555 33
Q ss_pred EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-c-CCCCcceEEEc
Q 017317 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-D-SLFFANGVALS 226 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~-~~~~~~gi~~~ 226 (373)
.+... ...+..+++.++|.+.++.+. .+.|..+|..+++..... . .......++++
T Consensus 144 ~~~~~-----~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~ 201 (312)
T 4ery_A 144 TLPAH-----SDPVSAVHFNRDGSLIVSSSY-----------------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFS 201 (312)
T ss_dssp EECCC-----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCSSCCCEEEEEEC
T ss_pred EecCC-----CCcEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCceeeEEeccCCCceEEEEEC
Confidence 33211 124678899999987666432 467888888766543322 2 22234568999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecC
Q 017317 227 KDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 227 ~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
++++.++.+ ..++.|..|++..
T Consensus 202 ~~~~~l~~~-~~d~~i~iwd~~~ 223 (312)
T 4ery_A 202 PNGKYILAA-TLDNTLKLWDYSK 223 (312)
T ss_dssp TTSSEEEEE-ETTTEEEEEETTT
T ss_pred CCCCEEEEE-cCCCeEEEEECCC
Confidence 999966555 4567888888754
No 155
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.63 E-value=2e-05 Score=73.47 Aligned_cols=173 Identities=13% Similarity=0.086 Sum_probs=103.8
Q ss_pred EEecCCCEE-EEecCCeEEEEEc-CCceEEee-eecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC--cEEEeeccC
Q 017317 83 CVDRNGVLY-TATRDGWIKRLHK-NGTWENWK-LIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG--VTVLASHVN 155 (373)
Q Consensus 83 a~d~~G~l~-v~~~~g~I~~~~~-~g~~~~~~-~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g--~~~l~~~~~ 155 (373)
++.++|.++ +++.+|.|..++. .++..... ...+... .+++.++|++++ +...+.+..++ .++ ...+...
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h-- 180 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEIT-KLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGH-- 180 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECC--
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccE-EEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCC--
Confidence 445677655 6778899999983 44433332 2234456 899999997554 45545577777 555 4444211
Q ss_pred CccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-------------------
Q 017317 156 GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS------------------- 216 (373)
Q Consensus 156 ~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~------------------- 216 (373)
...+.++++.++|...++.+. .+.|..+|..+++.......
T Consensus 181 ---~~~v~~~~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 240 (420)
T 3vl1_A 181 ---RATVTDIAIIDRGRNVLSASL-----------------DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDR 240 (420)
T ss_dssp ---SSCEEEEEEETTTTEEEEEET-----------------TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCS
T ss_pred ---CCcEEEEEEcCCCCEEEEEcC-----------------CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcc
Confidence 135778999999986665432 36788888776664433321
Q ss_pred ------CCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEE
Q 017317 217 ------LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAI 281 (373)
Q Consensus 217 ------~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~ 281 (373)
......++++++++.++.+ ..++.|..|++.... ....+..........++++++|. +.++.
T Consensus 241 ~~~~~~~~~v~~~~~s~~~~~l~~~-~~dg~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~l~~g 309 (420)
T 3vl1_A 241 QLHEISTSKKNNLEFGTYGKYVIAG-HVSGVITVHNVFSKE--QTIQLPSKFTCSCNSLTVDGNNANYIYAG 309 (420)
T ss_dssp SCGGGCCCCCCTTCSSCTTEEEEEE-ETTSCEEEEETTTCC--EEEEECCTTSSCEEEEEECSSCTTEEEEE
T ss_pred eeeecccCcccceEEcCCCCEEEEE-cCCCeEEEEECCCCc--eeEEcccccCCCceeEEEeCCCCCEEEEE
Confidence 1223456778999855555 456678899875432 11122211223456688899997 44443
No 156
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.63 E-value=5.4e-05 Score=67.68 Aligned_cols=150 Identities=9% Similarity=0.033 Sum_probs=94.8
Q ss_pred cCCcceEEEecCCCEE-EEecCCeEEEEE-cCCceE-EeeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC--cE
Q 017317 76 LNGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG--VT 148 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g--~~ 148 (373)
-..-.++++.|+|.+. ++..+|.|..++ .+++.. .+........ .+++.+++++.+ +...+.+..++ .++ ..
T Consensus 13 ~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~ 91 (304)
T 2ynn_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (304)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEE-EEEEeCCCCEEEEECCCCEEEEEECCCCcEEE
Confidence 3456789999988765 677899999999 444332 2222223334 778888887555 45445566677 566 33
Q ss_pred EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCC-eEEEeecC-CCCcceEEEc
Q 017317 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ETSILLDS-LFFANGVALS 226 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~~~~~-~~~~~gi~~~ 226 (373)
.+... ...+.++++.|++.+.++.+. .+.|..+|..++ .......+ ......++|+
T Consensus 92 ~~~~h-----~~~v~~~~~~~~~~~l~sgs~-----------------D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~ 149 (304)
T 2ynn_A 92 DFEAH-----PDYIRSIAVHPTKPYVLSGSD-----------------DLTVKLWNWENNWALEQTFEGHEHFVMCVAFN 149 (304)
T ss_dssp EEECC-----SSCEEEEEECSSSSEEEEEET-----------------TSCEEEEEGGGTTEEEEEECCCCSCEEEEEEC
T ss_pred EEeCC-----CCcEEEEEEcCCCCEEEEECC-----------------CCeEEEEECCCCcchhhhhcccCCcEEEEEEC
Confidence 33211 135788999999987776543 467777776554 33333332 3345789999
Q ss_pred c-CCCEEEEEeCCCCeEEEEEecC
Q 017317 227 K-DEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 227 ~-dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
| +++ ++++...++.|..|++..
T Consensus 150 p~~~~-~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 150 PKDPS-TFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp TTCTT-EEEEEETTSEEEEEETTC
T ss_pred CCCCC-EEEEEeCCCeEEEEECCC
Confidence 8 455 566666677888888753
No 157
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.62 E-value=1.2e-05 Score=74.73 Aligned_cols=237 Identities=12% Similarity=0.055 Sum_probs=137.1
Q ss_pred CcceEEEecCCCEE-EEecCCeEEEEEcCC------ceEEeeeecCccccCeEECCC-CcEEE-EECCCcEEEEe-cCCc
Q 017317 78 GPEDVCVDRNGVLY-TATRDGWIKRLHKNG------TWENWKLIGGDTLLGITTTQE-NEILV-CDADKGLLKVT-EEGV 147 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~g~I~~~~~~g------~~~~~~~~~~~p~~gl~~d~~-g~L~v-a~~~~gl~~~~-~~g~ 147 (373)
...++++.++|.++ ++..+|.|..++... ....+........ .+++.++ +++++ +...+.+..++ .++.
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK-TVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCC-EEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceE-EEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 35678888877654 677889999998332 1222222234455 8899987 66554 44444566666 3332
Q ss_pred ------EEEeeccCCccccccceeEEcCC-CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC----
Q 017317 148 ------TVLASHVNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS---- 216 (373)
Q Consensus 148 ------~~l~~~~~~~~~~~~~~l~~~~d-G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~---- 216 (373)
..............+.++++.++ +.++++.+. .+.|..+|..+++.......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----------------dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS-----------------SNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp SCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS-----------------SSCEEEEETTTTEEEEEECCCCCS
T ss_pred cccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC-----------------CCCEEEEECCCCCcceEEeccccc
Confidence 22111001112235778999998 577666442 47788999887765443332
Q ss_pred ---CCCcceEEEccCCCEEEEEeCCCC---eEEEEEecCCCCcceeEEecCCCCCCCceeECC-CCCEEEEEecCCCchh
Q 017317 217 ---LFFANGVALSKDEDYLVVCETFKF---RCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAILQLSSPGL 289 (373)
Q Consensus 217 ---~~~~~gi~~~~dg~~l~v~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~-dG~lwva~~~~~~~~~ 289 (373)
......++++|++..++++...++ .|..|++...... ...+..........+++++ +|++.++....
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d----- 284 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP-LQTLNQGHQKGILSLDWCHQDEHLLLSSGRD----- 284 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC-SBCCCSCCSSCEEEEEECSSCSSCEEEEESS-----
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC-cEEeecCccCceeEEEeCCCCCCeEEEEeCC-----
Confidence 234578999999854565555555 7888987643211 1111101123345678887 77655554322
Q ss_pred hhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEeC-C-EEEEeeCCCCeEE
Q 017317 290 EFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFD-D-HLYLGSLNTNFIG 366 (373)
Q Consensus 290 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~-g-~L~vgs~~~~~i~ 366 (373)
+.+..+| .+++.+..+....+ .+..+.... + ++++..-....|.
T Consensus 285 -----------------------------g~v~~wd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~d~~i~ 331 (416)
T 2pm9_A 285 -----------------------------NTVLLWNPESAEQLSQFPARGN----WCFKTKFAPEAPDLFACASFDNKIE 331 (416)
T ss_dssp -----------------------------SEEEEECSSSCCEEEEEECSSS----CCCCEEECTTCTTEEEECCSSSEEE
T ss_pred -----------------------------CCEEEeeCCCCccceeecCCCC----ceEEEEECCCCCCEEEEEecCCcEE
Confidence 2466677 45777777765442 466666653 3 4444444455677
Q ss_pred EeeCC
Q 017317 367 KLPLK 371 (373)
Q Consensus 367 ~~~l~ 371 (373)
.+++.
T Consensus 332 iw~~~ 336 (416)
T 2pm9_A 332 VQTLQ 336 (416)
T ss_dssp EEESC
T ss_pred EEEcc
Confidence 77765
No 158
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.62 E-value=2.7e-06 Score=77.94 Aligned_cols=183 Identities=19% Similarity=0.172 Sum_probs=108.9
Q ss_pred cccceeEEcCCCcEEEEeCCccc-cccccccccccccCCceEEEEeCCC--CeEEEe-ecC------CCCcceEEEcc--
Q 017317 160 NLADDLIAATDGSIYFSVASTKF-GLHNWGLDLLEAKPHGKLLKYDPSL--NETSIL-LDS------LFFANGVALSK-- 227 (373)
Q Consensus 160 ~~~~~l~~~~dG~l~v~~~~~~~-~~~~~~~~~~~~~~~g~l~~~d~~~--~~~~~~-~~~------~~~~~gi~~~~-- 227 (373)
..+.+|+++++|.+|++... .+ ++..+ .....|.|+++|+++ .+.+.+ ..+ ...|.|+.+.+
T Consensus 50 ~G~EDi~~~~~G~~~~s~~~-~~pg~~~~-----~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~ 123 (355)
T 3sre_A 50 NGSEDLEILPNGLAFISSGL-KYPGIMSF-----DPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDD 123 (355)
T ss_dssp SCCCEEEECTTSEEEEEECC-C----------------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECT
T ss_pred CCcceeEEcCCCeEEEEecc-ccCCCccc-----CCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECC
Confidence 46889999999999999732 11 11111 113468999999873 344433 222 24789999977
Q ss_pred CCC-EEEEEeCC--CCeEEEEEec--CCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHH
Q 017317 228 DED-YLVVCETF--KFRCLKYWLK--GESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLL 302 (373)
Q Consensus 228 dg~-~l~v~~~~--~~~i~~~~~~--~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~ 302 (373)
|++ +|||++.. +.++..|.++ +........+.......|+++++|++|++|+++..- ...|..+. .
T Consensus 124 dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~--------ftd~~~~~-~ 194 (355)
T 3sre_A 124 DNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY--------FIDPYLKS-W 194 (355)
T ss_dssp TCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS--------CSSHHHHH-H
T ss_pred CCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE--------eCCccccc-c
Confidence 343 69999876 4455555543 322222222222233478999999999999997531 01122221 1
Q ss_pred HhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEe-C-CEEEEeeCCCCeEEEeeCC
Q 017317 303 AAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEF-D-DHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 303 ~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~vgs~~~~~i~~~~l~ 371 (373)
.. . ...+.|.++++++. +...... + +..+.++..+ + .+||++......|.++++.
T Consensus 195 e~-------~-~~~~~g~vyr~d~~-~~~~~~~---~--l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 195 EM-------H-LGLAWSFVTYYSPN-DVRVVAE---G--FDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp HH-------H-TTCCCEEEEEECTT-CCEEEEE---E--ESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred hh-------h-ccCCccEEEEEECC-eEEEeec---C--CcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 10 0 13456889999984 4333222 1 3456667766 3 4899999999999999875
No 159
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=98.60 E-value=0.00029 Score=63.46 Aligned_cols=180 Identities=13% Similarity=0.062 Sum_probs=107.5
Q ss_pred cCCcceEEEecC----CC-EEEEecCCeEEEEE-cCCceEEe---eeecCccccCeEECCCCcEEEE-ECCCcEEEEe-c
Q 017317 76 LNGPEDVCVDRN----GV-LYTATRDGWIKRLH-KNGTWENW---KLIGGDTLLGITTTQENEILVC-DADKGLLKVT-E 144 (373)
Q Consensus 76 ~~~P~~ia~d~~----G~-l~v~~~~g~I~~~~-~~g~~~~~---~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~ 144 (373)
-..-.++++.++ +. |..|+.++.|..++ .+++.... ........ .+.+.+++.+.++ ...+.+..++ .
T Consensus 32 ~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~-~~~~~~~~~~l~s~s~D~~i~lWd~~ 110 (321)
T 3ow8_A 32 DDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVV-SVDISHTLPIAASSSLDAHIRLWDLE 110 (321)
T ss_dssp SSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETT
T ss_pred CCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEE-EEEECCCCCEEEEEeCCCcEEEEECC
Confidence 344566777653 33 55788899888888 34433221 11123345 7788888876654 4444566677 6
Q ss_pred CC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcc
Q 017317 145 EG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFAN 221 (373)
Q Consensus 145 ~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~ 221 (373)
++ ...+... ...+..+++.|+|...++.+. .+.+..+|..+++..... .......
T Consensus 111 ~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~g~~-----------------dg~v~i~~~~~~~~~~~~~~~~~~v~ 168 (321)
T 3ow8_A 111 NGKQIKSIDAG-----PVDAWTLAFSPDSQYLATGTH-----------------VGKVNIFGVESGKKEYSLDTRGKFIL 168 (321)
T ss_dssp TTEEEEEEECC-----TTCCCCEEECTTSSEEEEECT-----------------TSEEEEEETTTCSEEEEEECSSSCEE
T ss_pred CCCEEEEEeCC-----CccEEEEEECCCCCEEEEEcC-----------------CCcEEEEEcCCCceeEEecCCCceEE
Confidence 66 3333211 124567899999987766542 477888887766554332 3334457
Q ss_pred eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 222 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
.++++||++.+..+ ..++.|..|++...+ ....+. ........++++++|++.++..
T Consensus 169 ~~~~spdg~~lasg-~~dg~i~iwd~~~~~--~~~~~~-~h~~~v~~l~~spd~~~l~s~s 225 (321)
T 3ow8_A 169 SIAYSPDGKYLASG-AIDGIINIFDIATGK--LLHTLE-GHAMPIRSLTFSPDSQLLVTAS 225 (321)
T ss_dssp EEEECTTSSEEEEE-ETTSCEEEEETTTTE--EEEEEC-CCSSCCCEEEECTTSCEEEEEC
T ss_pred EEEECCCCCEEEEE-cCCCeEEEEECCCCc--EEEEEc-ccCCceeEEEEcCCCCEEEEEc
Confidence 89999999965555 456678888865432 111221 2223456788999998766544
No 160
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.60 E-value=1.8e-05 Score=73.30 Aligned_cols=203 Identities=14% Similarity=0.107 Sum_probs=109.5
Q ss_pred CCcceEEEecCCC-EEEEec--CCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEE-EEECCCcEEEEe-cC-C-cE
Q 017317 77 NGPEDVCVDRNGV-LYTATR--DGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEIL-VCDADKGLLKVT-EE-G-VT 148 (373)
Q Consensus 77 ~~P~~ia~d~~G~-l~v~~~--~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~-va~~~~gl~~~~-~~-g-~~ 148 (373)
..|+.+++++||+ +|+++. ++.|..+| .++++......++. . ++ +....+.| .....+.+..++ .+ + ..
T Consensus 137 ~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~-~-~~-~P~g~~~~~~~~~DG~~~~v~~~~~g~v~ 213 (386)
T 3sjl_D 137 TYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC-Y-HI-FPTAPDTFFMHCRDGSLAKVAFGTEGTPE 213 (386)
T ss_dssp CCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-E-EE-EEEETTEEEEEETTSCEEEEECCSSSCCE
T ss_pred CCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc-c-ee-ecCCCceeEEECCCCCEEEEECCCCCeEE
Confidence 3699999999875 788873 68899999 45554322222221 1 11 11111222 222223344444 22 3 31
Q ss_pred EEeec-cCCccccccceeEEc-CCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec----------C
Q 017317 149 VLASH-VNGSRINLADDLIAA-TDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD----------S 216 (373)
Q Consensus 149 ~l~~~-~~~~~~~~~~~l~~~-~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~----------~ 216 (373)
..... .........+...++ ++|++|+... .|.|+.+|..++..+.... .
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~------------------~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~ 275 (386)
T 3sjl_D 214 ITHTEVFHPEDEFLINHPAYSQKAGRLVWPTY------------------TGKIHQIDLSSGDAKFLPAVEALTEAERAD 275 (386)
T ss_dssp EEECCCCSCTTSCBCSCCEEETTTTEEEEEBT------------------TSEEEEEECTTSSCEECCCEESSCHHHHHT
T ss_pred EeecceeccccccccccceeEcCCCcEEEEeC------------------CCEEEEEECCCCcceeecceeccccccccc
Confidence 11110 110001111223554 7887655432 3789999987655433211 1
Q ss_pred CCCcce---EEEccCCCEEEEEeC---------CCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEec
Q 017317 217 LFFANG---VALSKDEDYLVVCET---------FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQ 283 (373)
Q Consensus 217 ~~~~~g---i~~~~dg~~l~v~~~---------~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~~ 283 (373)
...|.| ++++++++.+|++.. ..+.|..+|....+.... +. +...|.++++++||+ ++++++.
T Consensus 276 g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~--i~--vg~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 276 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK--FE--MGHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE--EE--EEEEECEEEECSSSSCEEEEEET
T ss_pred cccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE--EE--CCCCcceEEECCCCCeEEEEEcC
Confidence 122333 888999999999853 135799999765432221 11 123578999999996 5444433
Q ss_pred CCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCC
Q 017317 284 LSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDP 337 (373)
Q Consensus 284 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~ 337 (373)
.. +.+..+| ..++.+..+..+
T Consensus 352 ~~---------------------------------~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 352 GD---------------------------------KTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp TT---------------------------------TEEEEEETTTCCEEEEECCC
T ss_pred CC---------------------------------CeEEEEECCCCcEEEEecCC
Confidence 21 2467778 578888888654
No 161
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.59 E-value=1.3e-05 Score=73.61 Aligned_cols=176 Identities=11% Similarity=0.076 Sum_probs=104.4
Q ss_pred cceEEEecCCCEEEEecCCeEEEEE-cCCceEE---ee--eecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC--cE
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLH-KNGTWEN---WK--LIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG--VT 148 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~---~~--~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g--~~ 148 (373)
-.++++.+++.+.++..+|.|..++ .+++... +. ...+... .+++.++|++++ +...+.|..++ .++ ..
T Consensus 97 V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~-~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 97 VTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVK-TLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLK 175 (357)
T ss_dssp EEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 4678899999999999999998887 3333211 11 1123445 899999997655 45545577777 566 22
Q ss_pred EEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec---CCCCcceEE
Q 017317 149 VLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD---SLFFANGVA 224 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~---~~~~~~gi~ 224 (373)
.+.. ....++.+++.+++. ++++.+. .+.|..+|..+++...... .......++
T Consensus 176 ~~~~-----h~~~v~~v~~s~~~~~~~~s~~~-----------------dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 176 SYNA-----HSSEVNCVAACPGKDTIFLSCGE-----------------DGRILLWDTRKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp EECC-----CSSCEEEEEECTTCSSCEEEEET-----------------TSCEEECCTTSSSCBCBCCCTTCCSCEEEEE
T ss_pred EEcC-----CCCCEEEEEEccCCCceeeeecc-----------------CCceEEEECCCCceeeeeeeccccccccchh
Confidence 2211 123567889988874 5555432 4678888877665332221 122356789
Q ss_pred EccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEE
Q 017317 225 LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIA 280 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva 280 (373)
++|++..++++...++.|..|++...+. ...+. ........+++.++|.-+++
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~~~~--~~~~~-~~~~~v~~l~~sp~~~~~la 286 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKNPDS--AQTSA-VHSQNITGLAYSYHSSPFLA 286 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSCGGG--CEEEC-CCSSCEEEEEECSSSSCCEE
T ss_pred hhhcccceEEEeecccceeEEECCCCcE--eEEEe-ccceeEEEEEEcCCCCCEEE
Confidence 9998766777666677899998754322 12222 12223456788888853333
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.58 E-value=4.3e-06 Score=82.08 Aligned_cols=178 Identities=11% Similarity=0.032 Sum_probs=103.2
Q ss_pred ceEEEecCCCEEEEec---CC--eEEEEEc--CCceEEeeeecCccccCeEECCCC--cEEEEECCCcEEEEe-cCC-cE
Q 017317 80 EDVCVDRNGVLYTATR---DG--WIKRLHK--NGTWENWKLIGGDTLLGITTTQEN--EILVCDADKGLLKVT-EEG-VT 148 (373)
Q Consensus 80 ~~ia~d~~G~l~v~~~---~g--~I~~~~~--~g~~~~~~~~~~~p~~gl~~d~~g--~L~va~~~~gl~~~~-~~g-~~ 148 (373)
.++++.++..+|+++. +. .|+.++. +|....+... .... ..++.++| .+|++....++..++ .+| .+
T Consensus 68 ~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~l~~~-~~~~-~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~ 145 (582)
T 3o4h_A 68 LDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQRLEAV-KPMR-ILSGVDTGEAVVFTGATEDRVALYALDGGGLR 145 (582)
T ss_dssp CEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCEECTTS-CSBE-EEEEEECSSCEEEEEECSSCEEEEEEETTEEE
T ss_pred ccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccccccCC-CCce-eeeeCCCCCeEEEEecCCCCceEEEccCCcEE
Confidence 4455666634444443 22 5666765 6654433221 1222 23444444 466666556667777 667 55
Q ss_pred EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccC
Q 017317 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKD 228 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~d 228 (373)
.+.... . .+++++|||+.+++.+. .......|+++|.++++.+.+.........++|+||
T Consensus 146 ~l~~~~------~-~~~~~spDG~~la~~~~-------------~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpD 205 (582)
T 3o4h_A 146 ELARLP------G-FGFVSDIRGDLIAGLGF-------------FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPG 205 (582)
T ss_dssp EEEEES------S-CEEEEEEETTEEEEEEE-------------EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTT
T ss_pred EeecCC------C-ceEEECCCCCEEEEEEE-------------cCCCCeEEEEEcCCCCCceEeecCCCccccceECCC
Confidence 554321 1 68899999976554322 001124699999888887766544444578999999
Q ss_pred CCEEEEEeCCC-CeEEEEEecCCCCcceeEEecCCCCCCCcee--------ECCCCCEEEEEec
Q 017317 229 EDYLVVCETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIK--------LAPDGSFWIAILQ 283 (373)
Q Consensus 229 g~~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~--------~d~dG~lwva~~~ 283 (373)
|+.|+.++... ..|+++++++... . ........+.+++ +++||.++++...
T Consensus 206 G~~l~~~~~~~~~~i~~~d~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 206 MKVTAGLETAREARLVTVDPRDGSV---E-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp SCEEEEEECSSCEEEEEECTTTCCE---E-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred CCEEEEccCCCeeEEEEEcCCCCcE---E-EccCCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 99888555433 2788888765432 2 2212222234456 8999988777654
No 163
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.58 E-value=2.7e-05 Score=72.27 Aligned_cols=178 Identities=9% Similarity=0.026 Sum_probs=110.4
Q ss_pred CCcceEEEecCCCE-EEEecCCeEEEEE-cCCceEEeeeec-Cc---------------cccCeEECCCCcEEEEECCCc
Q 017317 77 NGPEDVCVDRNGVL-YTATRDGWIKRLH-KNGTWENWKLIG-GD---------------TLLGITTTQENEILVCDADKG 138 (373)
Q Consensus 77 ~~P~~ia~d~~G~l-~v~~~~g~I~~~~-~~g~~~~~~~~~-~~---------------p~~gl~~d~~g~L~va~~~~g 138 (373)
....++++.++|.. +++..+|.|..++ .+++........ .. .. .+.+.+++.++++...+.
T Consensus 150 ~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~ 228 (425)
T 1r5m_A 150 APIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGV-DVEWVDDDKFVIPGPKGA 228 (425)
T ss_dssp SCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBS-CCEEEETTEEEEECGGGC
T ss_pred ccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceee-EEEEcCCCEEEEEcCCCe
Confidence 44667888887764 4777889999998 445432221111 11 55 888888888888776666
Q ss_pred EEEEe-cCC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec
Q 017317 139 LLKVT-EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD 215 (373)
Q Consensus 139 l~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~ 215 (373)
+..++ .++ ...+.. ....+..+++.++|.++++.+. .+.|..+|..+++......
T Consensus 229 i~~~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~ 286 (425)
T 1r5m_A 229 IFVYQITEKTPTGKLIG-----HHGPISVLEFNDTNKLLLSASD-----------------DGTLRIWHGGNGNSQNCFY 286 (425)
T ss_dssp EEEEETTCSSCSEEECC-----CSSCEEEEEEETTTTEEEEEET-----------------TSCEEEECSSSBSCSEEEC
T ss_pred EEEEEcCCCceeeeecc-----CCCceEEEEECCCCCEEEEEcC-----------------CCEEEEEECCCCccceEec
Confidence 88888 555 333321 1134678999999976665432 4678888876654333222
Q ss_pred -CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 216 -SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 216 -~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
.......+++++++ ++++...++.|..|++.... ....+. ........++++++|++.++..
T Consensus 287 ~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 287 GHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNT--LLALSI-VDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp CCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTE--EEEEEE-CTTCCEEEEEECTTSSEEEEEE
T ss_pred CCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCc--EeEecc-cCCccEEEEEEcCCCCEEEEEE
Confidence 23345789999998 44444567789999875432 112222 2223456788899998665544
No 164
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.57 E-value=5.4e-05 Score=77.02 Aligned_cols=181 Identities=10% Similarity=0.066 Sum_probs=111.0
Q ss_pred cCCcceEEEecCCCEE-EEecCCeEEEEE-cCCceE-EeeeecCccccCeEECCCCcEE-EEECCCcEEEEe-cCC--cE
Q 017317 76 LNGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEIL-VCDADKGLLKVT-EEG--VT 148 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~L~-va~~~~gl~~~~-~~g--~~ 148 (373)
-....++++.|+|... ++..+|.|..++ .+|+.. .+....+... ++++.++|++. ++...+.+..++ .++ ..
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 3557889999988765 677889999999 555433 3332334456 89999999755 455545566777 666 33
Q ss_pred EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCC-eEEEeec-CCCCcceEEEc
Q 017317 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ETSILLD-SLFFANGVALS 226 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~~~~-~~~~~~gi~~~ 226 (373)
.+... ...+..+++.++|...++.+. .|.|..+|.+++ ....... .......++|+
T Consensus 92 ~~~~~-----~~~v~~~~~s~~~~~l~~~~~-----------------dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~ 149 (814)
T 3mkq_A 92 DFEAH-----PDYIRSIAVHPTKPYVLSGSD-----------------DLTVKLWNWENNWALEQTFEGHEHFVMCVAFN 149 (814)
T ss_dssp EEECC-----SSCEEEEEECSSSSEEEEEET-----------------TSEEEEEEGGGTSEEEEEEECCSSCEEEEEEE
T ss_pred EEecC-----CCCEEEEEEeCCCCEEEEEcC-----------------CCEEEEEECCCCceEEEEEcCCCCcEEEEEEE
Confidence 33211 135778999999975554322 367878886655 3333332 23345789999
Q ss_pred c-CCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECC--CCCEEEEEe
Q 017317 227 K-DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP--DGSFWIAIL 282 (373)
Q Consensus 227 ~-dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~--dG~lwva~~ 282 (373)
| +++ ++++...++.|..|++...... ..+..........+++.+ +|.+.++..
T Consensus 150 p~~~~-~l~~~~~dg~v~vwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 150 PKDPS-TFASGCLDRTVKVWSLGQSTPN--FTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp TTEEE-EEEEEETTSEEEEEETTCSSCS--EEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred cCCCC-EEEEEeCCCeEEEEECCCCcce--eEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 9 666 5555556678989987543221 122212223455677776 787655543
No 165
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.57 E-value=4.8e-05 Score=70.15 Aligned_cols=184 Identities=11% Similarity=0.002 Sum_probs=109.1
Q ss_pred CCcceEEEecC----C---CE-EEEecCCeEEEEE-cCCc------eEEeeee-----cCccccCeEEC----CCCcE-E
Q 017317 77 NGPEDVCVDRN----G---VL-YTATRDGWIKRLH-KNGT------WENWKLI-----GGDTLLGITTT----QENEI-L 131 (373)
Q Consensus 77 ~~P~~ia~d~~----G---~l-~v~~~~g~I~~~~-~~g~------~~~~~~~-----~~~p~~gl~~d----~~g~L-~ 131 (373)
....++++.++ | .+ +++..+|.|..++ ..++ ...+... ..... .+++. ++++. +
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~l 141 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW-ALKWGASNDRLLSHRL 141 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEE-EEEEECCC----CEEE
T ss_pred CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEE-EEEEeeccCCCCceEE
Confidence 34577888887 7 54 4677889998888 3333 3333332 24456 88998 88875 4
Q ss_pred -EEECCCcEEEEe-cC------C--cE-----EEee--ccCCccccccceeEEcCCCcEEEEeCCccccccccccccccc
Q 017317 132 -VCDADKGLLKVT-EE------G--VT-----VLAS--HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEA 194 (373)
Q Consensus 132 -va~~~~gl~~~~-~~------g--~~-----~l~~--~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~ 194 (373)
++...+.+..++ .. + .. .+.. .........+..+++.++| ++++.+
T Consensus 142 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~---------------- 204 (397)
T 1sq9_A 142 VATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF---------------- 204 (397)
T ss_dssp EEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC----------------
T ss_pred EEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe----------------
Confidence 455555577777 55 3 33 2211 0001122357889999999 555543
Q ss_pred cCCceEEEEeCCCCeEEEeecC-------CCCcceEEEccCCCEEEEEeCCC---CeEEEEEecCCCCcceeEEecC---
Q 017317 195 KPHGKLLKYDPSLNETSILLDS-------LFFANGVALSKDEDYLVVCETFK---FRCLKYWLKGESKEQTEIFVEN--- 261 (373)
Q Consensus 195 ~~~g~l~~~d~~~~~~~~~~~~-------~~~~~gi~~~~dg~~l~v~~~~~---~~i~~~~~~~~~~~~~~~~~~~--- 261 (373)
..+.|..+|..+++....... ......++++++++.++++. .+ +.|..|++...+ ....+...
T Consensus 205 -~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~-~d~~~g~i~i~d~~~~~--~~~~~~~~~~~ 280 (397)
T 1sq9_A 205 -NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH-DSNSFGCITLYETEFGE--RIGSLSVPTHS 280 (397)
T ss_dssp -TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE-EETTEEEEEEEETTTCC--EEEEECBC---
T ss_pred -CCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe-cCCCCceEEEEECCCCc--ccceeccCccc
Confidence 247899999887765544443 34557899999999666554 34 678888875432 12222210
Q ss_pred ---------CCCCCCceeECCCCCEEEEEe
Q 017317 262 ---------LPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 262 ---------~~g~p~~i~~d~dG~lwva~~ 282 (373)
.......++++++|++.++..
T Consensus 281 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 310 (397)
T 1sq9_A 281 SQASLGEFAHSSWVMSLSFNDSGETLCSAG 310 (397)
T ss_dssp -----CCBSBSSCEEEEEECSSSSEEEEEE
T ss_pred ccccccccccCCcEEEEEECCCCCEEEEEe
Confidence 123455688889998666544
No 166
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.56 E-value=2.1e-05 Score=73.20 Aligned_cols=183 Identities=10% Similarity=-0.012 Sum_probs=111.8
Q ss_pred CCcceEEEec-CCCEE-EEecCCeEEEEE-cCCc--------eEEeeeecCccccCeEECCCC-cEE-EEECCCcEEEEe
Q 017317 77 NGPEDVCVDR-NGVLY-TATRDGWIKRLH-KNGT--------WENWKLIGGDTLLGITTTQEN-EIL-VCDADKGLLKVT 143 (373)
Q Consensus 77 ~~P~~ia~d~-~G~l~-v~~~~g~I~~~~-~~g~--------~~~~~~~~~~p~~gl~~d~~g-~L~-va~~~~gl~~~~ 143 (373)
....++++.+ ++.++ +++.+|.|..++ .++. ...+........ .+++.++| +++ .+...+.+..++
T Consensus 82 ~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 82 APVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG-IVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE-EEEECSSBTTEEEEEETTSCEEEEE
T ss_pred CCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE-EEEECcCCCCEEEEEcCCCEEEEEE
Confidence 3456788988 77666 677899999998 3432 223332334456 89999997 454 455555677788
Q ss_pred -cCC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCC-
Q 017317 144 -EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLF- 218 (373)
Q Consensus 144 -~~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~- 218 (373)
.++ ...+.. .+ ....+.++++.++|.++++.+. .+.|..+|..+++..... ....
T Consensus 161 ~~~~~~~~~~~~--~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~ 220 (402)
T 2aq5_A 161 VGTGAAVLTLGP--DV-HPDTIYSVDWSRDGALICTSCR-----------------DKRVRVIEPRKGTVVAEKDRPHEG 220 (402)
T ss_dssp TTTTEEEEEECT--TT-CCSCEEEEEECTTSSCEEEEET-----------------TSEEEEEETTTTEEEEEEECSSCS
T ss_pred CCCCCccEEEec--CC-CCCceEEEEECCCCCEEEEEec-----------------CCcEEEEeCCCCceeeeeccCCCC
Confidence 666 222210 11 1235778999999976555432 478999998877655433 2222
Q ss_pred -CcceEEEccCCCEEEEEe--CCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEE
Q 017317 219 -FANGVALSKDEDYLVVCE--TFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (373)
Q Consensus 219 -~~~gi~~~~dg~~l~v~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~ 281 (373)
....++++++++.++++. ..++.|..|++...... ..............++++++|++.+.+
T Consensus 221 ~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 221 TRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEP-LSLQELDTSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp SSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSC-SEEEECCCCSSCEEEEEETTTTEEEEE
T ss_pred CcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCC-ceEEeccCCCceeEEEEcCCCCEEEEE
Confidence 357899999988444442 45678888887543221 111111122345667889999866443
No 167
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.56 E-value=0.00012 Score=68.46 Aligned_cols=149 Identities=12% Similarity=0.090 Sum_probs=96.8
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEE-cCCceE-EeeeecCccccCeEECCCCcEEEE-ECCCcEEEEe-cCC--cEE
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VTV 149 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~g--~~~ 149 (373)
....++++.+++.+. +++.+|.|..++ .+++.. .+........ .++++++|+++++ ...+.+..++ .++ ...
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~-~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~ 187 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ-DISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEE-EEEECTTSSEEEEEETTSCCCEEETTSSCEEEC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEE
Confidence 445678899987766 677899999999 555543 3322234456 8999999986654 4444566666 444 222
Q ss_pred EeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec-CCCCcceEEEccC
Q 017317 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SLFFANGVALSKD 228 (373)
Q Consensus 150 l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~~~~~gi~~~~d 228 (373)
+ .+ ....+..+++.|+|...++.+. .+.|..+|..+++...... .......+.++++
T Consensus 188 ~----~~-h~~~V~~v~~~p~~~~l~s~s~-----------------D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~ 245 (410)
T 1vyh_C 188 M----HG-HDHNVSSVSIMPNGDHIVSASR-----------------DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQD 245 (410)
T ss_dssp C----CC-CSSCEEEEEECSSSSEEEEEET-----------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred E----cC-CCCCEEEEEEeCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEeCCCccEEEEEECCC
Confidence 2 11 1235788999999987766442 4788888987776443332 2334567889999
Q ss_pred CCEEEEEeCCCCeEEEEEecC
Q 017317 229 EDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~ 249 (373)
++ ++++...++.|..|++..
T Consensus 246 g~-~l~s~s~D~~v~vwd~~~ 265 (410)
T 1vyh_C 246 GT-LIASCSNDQTVRVWVVAT 265 (410)
T ss_dssp SS-EEEEEETTSCEEEEETTT
T ss_pred CC-EEEEEcCCCeEEEEECCC
Confidence 98 455545567788888654
No 168
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.56 E-value=1e-05 Score=72.62 Aligned_cols=214 Identities=12% Similarity=0.138 Sum_probs=130.0
Q ss_pred cceEEEecCCCEEE-Eec-------------CCeEEEEEcCCce-EEeeeecCccccCeEECCCCcEEEEE----CCCcE
Q 017317 79 PEDVCVDRNGVLYT-ATR-------------DGWIKRLHKNGTW-ENWKLIGGDTLLGITTTQENEILVCD----ADKGL 139 (373)
Q Consensus 79 P~~ia~d~~G~l~v-~~~-------------~g~I~~~~~~g~~-~~~~~~~~~p~~gl~~d~~g~L~va~----~~~gl 139 (373)
+..+.++ ++.||. ... ...|++++.+|.. +.+... ... .++.+ .+.||.++ ....|
T Consensus 57 ~~~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~--~~~-~~s~~-g~~Iy~~~~~~~~~~~I 131 (302)
T 3s25_A 57 AMYINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD--PCI-YASLI-GNYIYYLHYDTQTATSL 131 (302)
T ss_dssp EEEEEEC-SSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS--CEE-EEEEE-TTEEEEEEESSSSCEEE
T ss_pred eeeEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC--Ccc-EEEEe-CCEEEEEeecCCCCceE
Confidence 3455555 567774 333 2478999977753 333221 111 23332 34688876 23468
Q ss_pred EEEecCC--cEEEeeccCCccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC
Q 017317 140 LKVTEEG--VTVLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS 216 (373)
Q Consensus 140 ~~~~~~g--~~~l~~~~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~ 216 (373)
++++.+| .+.+..... ++++++| .||+++.. ...|++.+.+++..+.+..+
T Consensus 132 y~~~~dGs~~~~lt~~~~---------~~~~~~g~~iy~t~~g-----------------~~~Iy~~~l~g~~~~~l~~~ 185 (302)
T 3s25_A 132 YRIRIDGEEKKKIKNHYL---------FTCNTSDRYFYYNNPK-----------------NGQLYRYDTASQSEALFYDC 185 (302)
T ss_dssp EEEETTSCCCEEEESSCC---------CCSEEETTEEEEECTT-----------------TCCEEEEETTTTEEEEEECS
T ss_pred EEEECCCCCeEEEeCCCc---------eEeeEECCEEEEEeCC-----------------CceEEEEECCCCCEEEEeCC
Confidence 8888444 555543211 2335555 79998642 35799999887776666443
Q ss_pred CCCcceEEEccCCCEEEEEeCCC-CeEEEEEecCCCCcceeEEecCCCCCCCceeECCCC-CEEEEEecCCCchhhhccC
Q 017317 217 LFFANGVALSKDEDYLVVCETFK-FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG-SFWIAILQLSSPGLEFVHT 294 (373)
Q Consensus 217 ~~~~~gi~~~~dg~~l~v~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG-~lwva~~~~~~~~~~~~~~ 294 (373)
+....++|+++.|||++... ..|++.+++|... .++... ..| .++++| .||.+.....
T Consensus 186 ---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~---~~Lt~~--~~~---~~~~~g~~Iy~~~~~~~--------- 245 (302)
T 3s25_A 186 ---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNP---VVLTEA--NIE---HYNVYGSLIFYQRGGDN--------- 245 (302)
T ss_dssp ---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCC---EECSCS--CEE---EEEEETTEEEEEECSSS---------
T ss_pred ---CccceeeecCCEEEEEEcCCCcEEEEEECCCCCe---EEEeCC--Ccc---eEEECCCEEEEEECCCC---------
Confidence 22345679999999998653 6899999887532 222211 112 255556 4655543321
Q ss_pred ChHHHHHHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCCCC
Q 017317 295 SKATKHLLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLKAT 373 (373)
Q Consensus 295 ~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~~~ 373 (373)
..|..++.+|...+.+...+ ...+...+++||........|.+++++++
T Consensus 246 ------------------------~~i~~~~~DG~~r~~l~~~~------~~~i~i~~d~Iy~td~~~~~i~~~~~dGs 294 (302)
T 3s25_A 246 ------------------------PALCVVKNDGTGFKELAKGE------FCNINVTSQYVYFTDFVSNKEYCTSTQNP 294 (302)
T ss_dssp ------------------------CEEEEEETTSCCCEEEEESC------EEEEEECSSEEEEEETTTCCEEEEESSSC
T ss_pred ------------------------cEEEEEECCCCccEEeeCCc------cceEEEeCCEEEEEECCCCeEEEEECCCC
Confidence 35788888887655554321 33566678999999998888999998753
No 169
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.56 E-value=1.2e-05 Score=74.20 Aligned_cols=186 Identities=11% Similarity=0.094 Sum_probs=110.7
Q ss_pred cceEEEecCCCEE-EEe--cCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC-cEEEee
Q 017317 79 PEDVCVDRNGVLY-TAT--RDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLAS 152 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~--~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l~~ 152 (373)
...+++.|||++. +++ .++.|..++ .+++........+... ++++.++|++++.....++..++ .++ ......
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceE-EEEEccCCceEEeccceeEEEEEeccCcceeeee
Confidence 4578999999865 555 568888888 4554433333345566 99999999987766667788887 555 222111
Q ss_pred ccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE-----eecCCCCcceEEEcc
Q 017317 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI-----LLDSLFFANGVALSK 227 (373)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~-----~~~~~~~~~gi~~~~ 227 (373)
..+ ....+..+++.|+|...++.+.. ......++.++........ +.........++|+|
T Consensus 215 -~~~-~~~~v~~v~fspdg~~l~~~s~d-------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Sp 279 (365)
T 4h5i_A 215 -DFD-KNWSLSKINFIADDTVLIAASLK-------------KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDM 279 (365)
T ss_dssp -CCC-TTEEEEEEEEEETTEEEEEEEES-------------SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECT
T ss_pred -cCC-CCCCEEEEEEcCCCCEEEEEecC-------------CcceeEEeecccccceecceeeeeecCCCCCeEeEEECC
Confidence 111 12346789999999876664320 0011245555544443321 222233346789999
Q ss_pred CCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEec
Q 017317 228 DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 228 dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~ 283 (373)
||+.|..+ ..++.|..|++...+ ....+...-.+....+++.+||++.++...
T Consensus 280 dg~~lasg-s~D~~V~iwd~~~~~--~~~~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 280 KGELAVLA-SNDNSIALVKLKDLS--MSKIFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp TSCEEEEE-ETTSCEEEEETTTTE--EEEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred CCCceEEE-cCCCEEEEEECCCCc--EEEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence 99955444 456778888865321 112222111234567899999998776543
No 170
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.55 E-value=6.3e-06 Score=76.09 Aligned_cols=203 Identities=12% Similarity=-0.054 Sum_probs=109.2
Q ss_pred eeEeccCCcCCcceEEEecCC-CEEEEe----------cCCeEEEEE-cCCceEEeeeec--------CccccCeEECCC
Q 017317 68 VTRLGEGILNGPEDVCVDRNG-VLYTAT----------RDGWIKRLH-KNGTWENWKLIG--------GDTLLGITTTQE 127 (373)
Q Consensus 68 ~~~~~~g~~~~P~~ia~d~~G-~l~v~~----------~~g~I~~~~-~~g~~~~~~~~~--------~~p~~gl~~d~~ 127 (373)
+.++..| ..| .++++++| .+|+++ .++.|.++| .+++.......+ ..|. ++++++|
T Consensus 59 ~~~i~vG--~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~-~ia~SpD 134 (368)
T 1mda_H 59 LGHSLGA--FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH-IIGNCAS 134 (368)
T ss_dssp EEEEEEC--TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT-SEEECTT
T ss_pred EEEEeCC--CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc-eEEEcCC
Confidence 3445555 458 89999966 688886 256799999 455543322222 4699 9999999
Q ss_pred C-cEEEEECC-Cc-EEE--Ee-cCCcEEEeeccCCccccccc----eeEEcCCCcEEEEeCCc------ccccc---cc-
Q 017317 128 N-EILVCDAD-KG-LLK--VT-EEGVTVLASHVNGSRINLAD----DLIAATDGSIYFSVAST------KFGLH---NW- 187 (373)
Q Consensus 128 g-~L~va~~~-~g-l~~--~~-~~g~~~l~~~~~~~~~~~~~----~l~~~~dG~l~v~~~~~------~~~~~---~~- 187 (373)
| .|||++.. .. +.. +| .+ ...+.. .+.....+. -++..+||++.+.+... +.... ..
T Consensus 135 Gk~lyVan~~~~~~v~V~~iD~~t-v~~i~v--~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~ 211 (368)
T 1mda_H 135 SACLLFFLFGSSAAAGLSVPGASD-DQLTKS--ASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQN 211 (368)
T ss_dssp SSCEEEEECSSSCEEEEEETTTEE-EEEEEC--SSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSC
T ss_pred CCEEEEEccCCCCeEEEEEEchhh-ceEEEC--CCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeee
Confidence 9 59999753 33 444 45 22 222211 110000111 13334555433333221 00000 00
Q ss_pred ----------ccccccccCCceEEEEeCCCCeEEEeec----------CCCCcce---EEEccCCCEEEEEeC---C---
Q 017317 188 ----------GLDLLEAKPHGKLLKYDPSLNETSILLD----------SLFFANG---VALSKDEDYLVVCET---F--- 238 (373)
Q Consensus 188 ----------~~~~~~~~~~g~l~~~d~~~~~~~~~~~----------~~~~~~g---i~~~~dg~~l~v~~~---~--- 238 (373)
......... +.++.+|..++..+.... ....|.| +++++|++++||+.. .
T Consensus 212 vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 212 CSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp BCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred CCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccc
Confidence 000011112 567778875433222111 1223555 899999999999864 3
Q ss_pred --CCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEe
Q 017317 239 --KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (373)
Q Consensus 239 --~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~ 282 (373)
.+.+..+|....+... .+ .....|.++++++||+ +|+++.
T Consensus 291 ~~~~~~~ViD~~t~~vv~--~i--~vg~~p~gi~~s~Dg~~l~va~~ 333 (368)
T 1mda_H 291 AAAENTSSVTASVGQTSG--PI--SNGHDSDAIIAAQDGASDNYANS 333 (368)
T ss_dssp SCEEEEEEEESSSCCEEE--CC--EEEEEECEEEECCSSSCEEEEEE
T ss_pred ccCCCEEEEECCCCeEEE--EE--ECCCCcceEEECCCCCEEEEEcc
Confidence 3467788865433211 11 1123699999999996 899987
No 171
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.53 E-value=0.00021 Score=66.36 Aligned_cols=180 Identities=12% Similarity=0.014 Sum_probs=109.0
Q ss_pred CCcceEEEecCCCEEEEecCCeEEEEE-cCCceEEeeeec-------------------CccccCeEECCCCcEEEE-EC
Q 017317 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIG-------------------GDTLLGITTTQENEILVC-DA 135 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~-------------------~~p~~gl~~d~~g~L~va-~~ 135 (373)
....++++.++|.+++...++.+..++ .+|+........ .... .+++.++|+++++ ..
T Consensus 65 ~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 65 SVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR-SVCFSPDGKFLATGAE 143 (393)
T ss_dssp SCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEE-EEEECTTSSEEEEEET
T ss_pred CEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEE-EEEECCCCCEEEEEcC
Confidence 345789999999987655567787777 455432211100 0134 7889999976554 54
Q ss_pred CCcEEEEe-cCC-c-EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE
Q 017317 136 DKGLLKVT-EEG-V-TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (373)
Q Consensus 136 ~~gl~~~~-~~g-~-~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 212 (373)
.+.|..++ .++ . ..+. + ....+.++++.++|...++.+. .+.|..+|..+++...
T Consensus 144 d~~i~iwd~~~~~~~~~~~----~-h~~~v~~~~~~p~~~~l~s~s~-----------------d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQ----G-HEQDIYSLDYFPSGDKLVSGSG-----------------DRTVRIWDLRTGQCSL 201 (393)
T ss_dssp TSCEEEEETTTTEEEEEEC----C-CSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCcEEEEEc----c-CCCCEEEEEEcCCCCEEEEecC-----------------CCcEEEEECCCCeeEE
Confidence 45566677 555 2 2221 1 1135778999999987666443 4788888988777654
Q ss_pred eecCCCCcceEEEcc-CCCEEEEEeCCCCeEEEEEecCCCCcceeEEe------cCCCCCCCceeECCCCCEEEEEe
Q 017317 213 LLDSLFFANGVALSK-DEDYLVVCETFKFRCLKYWLKGESKEQTEIFV------ENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 213 ~~~~~~~~~gi~~~~-dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
..........+++++ +++ ++++...++.|..|+...... ...+. ..-......++++++|++.++..
T Consensus 202 ~~~~~~~v~~~~~~~~~~~-~l~~~s~d~~v~iwd~~~~~~--~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 202 TLSIEDGVTTVAVSPGDGK-YIAAGSLDRAVRVWDSETGFL--VERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp EEECSSCEEEEEECSTTCC-EEEEEETTSCEEEEETTTCCE--EEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEcCCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCCcE--EEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 444334456788998 777 445545667788888654321 11110 01112345578899998666543
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.53 E-value=2.9e-05 Score=71.55 Aligned_cols=195 Identities=16% Similarity=0.194 Sum_probs=107.7
Q ss_pred EEEecCCC-EEEEec-CC--eEEEEEc-CCceEEeeeecCccccCeEECCCCc-EEEEECCCcEEEEe-cCC-cEEEeec
Q 017317 82 VCVDRNGV-LYTATR-DG--WIKRLHK-NGTWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG-VTVLASH 153 (373)
Q Consensus 82 ia~d~~G~-l~v~~~-~g--~I~~~~~-~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g-~~~l~~~ 153 (373)
.++.|||+ |++... +| .|+.++. .|+...+.........+.++.+||+ |+++.....++.++ .++ .+.+...
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 35677886 444443 45 4888884 4555444333332221678999996 66666556788899 666 5444332
Q ss_pred cCCccccccceeEEcCCCcEEEEeCCc--cccc-ccc--ccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEcc-
Q 017317 154 VNGSRINLADDLIAATDGSIYFSVAST--KFGL-HNW--GLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSK- 227 (373)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~l~v~~~~~--~~~~-~~~--~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~- 227 (373)
..+ .........++||++.++.... .+.. ..+ ............|+.+|.++++.+.+.........++++|
T Consensus 121 ~~~--~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 121 PAE--WVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPY 198 (388)
T ss_dssp CTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred hhh--cccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCC
Confidence 111 1111123457888776642110 0000 000 0011123344789999999888777665545567899999
Q ss_pred CCCEEEEEeCC-----CCeEEEEEecCCCCcceeEEecCCCC-CCCceeECCCCC-EEEEE
Q 017317 228 DEDYLVVCETF-----KFRCLKYWLKGESKEQTEIFVENLPG-GPDNIKLAPDGS-FWIAI 281 (373)
Q Consensus 228 dg~~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~~~~~~g-~p~~i~~d~dG~-lwva~ 281 (373)
||+.++++... ..+|+.++.++.... .+.....+ .....++++||+ |+...
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~---~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTNMR---KVKTHAEGESCTHEFWVPDGSALVYVS 256 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCCCE---ESCCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCceE---EeeeCCCCcccccceECCCCCEEEEEe
Confidence 99877666543 347888887654321 12111111 122457889996 53433
No 173
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.53 E-value=5.4e-05 Score=74.06 Aligned_cols=187 Identities=11% Similarity=0.013 Sum_probs=108.8
Q ss_pred CCcceEEEecCCCEEEEecCCeEEEEE-cCC----c-eEEeeeecCc-cccCeEECC--CCcEEE-EECCCcEEEEe-cC
Q 017317 77 NGPEDVCVDRNGVLYTATRDGWIKRLH-KNG----T-WENWKLIGGD-TLLGITTTQ--ENEILV-CDADKGLLKVT-EE 145 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~g~I~~~~-~~g----~-~~~~~~~~~~-p~~gl~~d~--~g~L~v-a~~~~gl~~~~-~~ 145 (373)
..+.+++++++|++.+...++.|..++ .++ + ...+...... .. .+++.+ +|++++ +...+.+..++ .+
T Consensus 19 ~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~-~~~~sp~~~~~~l~s~~~dg~v~vw~~~~ 97 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVT-TVKFSPIKGSQYLCSGDESGKVIVWGWTF 97 (615)
T ss_dssp TCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEE-EEEECSSTTCCEEEEEETTSEEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEE-EEEECcCCCCCEEEEecCCCEEEEEeCCC
Confidence 456789999999877544478899888 444 3 3333333344 56 899999 997555 45444455555 32
Q ss_pred C------cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCC
Q 017317 146 G------VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFF 219 (373)
Q Consensus 146 g------~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~ 219 (373)
+ .........+ ....+.++++.++|+..++.+.. ....+.|+.+|.. .....+......
T Consensus 98 ~~~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~-------------~~~~~~v~~~d~~-~~~~~~~~~~~~ 162 (615)
T 1pgu_A 98 DKESNSVEVNVKSEFQV-LAGPISDISWDFEGRRLCVVGEG-------------RDNFGVFISWDSG-NSLGEVSGHSQR 162 (615)
T ss_dssp EGGGTEEEEEEEEEEEC-CSSCEEEEEECTTSSEEEEEECC-------------SSCSEEEEETTTC-CEEEECCSCSSC
T ss_pred Ccccccccccccchhhc-ccccEEEEEEeCCCCEEEEeccC-------------CCCccEEEEEECC-CcceeeecCCcc
Confidence 2 1111111111 12357889999999766554320 1123678888732 333333333344
Q ss_pred cceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCC---CCCceeECCC-CCEEEEEe
Q 017317 220 ANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPG---GPDNIKLAPD-GSFWIAIL 282 (373)
Q Consensus 220 ~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g---~p~~i~~d~d-G~lwva~~ 282 (373)
...++|+++++.++++...++.|..|+....+ ....+. .... ....++++++ |++.++..
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~--~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~ 226 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFYQGPPFK--FSASDR-THHKQGSFVRDVEFSPDSGEFVITVG 226 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEEETTTBE--EEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEE
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc--eeeeec-ccCCCCceEEEEEECCCCCCEEEEEe
Confidence 57899999998566666667788888854321 111221 1122 3456788999 87655443
No 174
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.52 E-value=0.00034 Score=64.53 Aligned_cols=259 Identities=11% Similarity=0.043 Sum_probs=128.0
Q ss_pred CCcCCcceEEEecCCC-EEEEecCCeEEEEE-cCCceE-EeeeecCccccCeEECCCCcEEEEEC-CCcEEEEe-cC---
Q 017317 74 GILNGPEDVCVDRNGV-LYTATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVCDA-DKGLLKVT-EE--- 145 (373)
Q Consensus 74 g~~~~P~~ia~d~~G~-l~v~~~~g~I~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~L~va~~-~~gl~~~~-~~--- 145 (373)
|--..-.++++.++|. |..++.+|.|..++ .+++.. .+........ .+++.++|++.++.. ...+..++ .+
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~-~~~~s~~g~~las~~~d~~v~iw~~~~~~~ 142 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVM-ECAFAPNGQSVACGGLDSACSIFNLSSQAD 142 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCC-CCEECTTSSEEEECCSSSCCEEEECCCCSS
T ss_pred ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEE-EEEECCCCCEEEEeeCCCcEEEEECCCCcc
Confidence 4334567888988776 44778899999999 444432 2222233455 788888887665432 23344443 21
Q ss_pred --C-c---EEEeeccC---Ccccc--cccee-EEcCCCcEEEEeCCcc-----c------cccc----------cccccc
Q 017317 146 --G-V---TVLASHVN---GSRIN--LADDL-IAATDGSIYFSVASTK-----F------GLHN----------WGLDLL 192 (373)
Q Consensus 146 --g-~---~~l~~~~~---~~~~~--~~~~l-~~~~dG~l~v~~~~~~-----~------~~~~----------~~~~~~ 192 (373)
+ . ..+..+.. ...+. ...-+ .-..||.+.+=|.... + +-.. ....+.
T Consensus 143 ~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~ 222 (380)
T 3iz6_a 143 RDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFI 222 (380)
T ss_dssp CCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEE
T ss_pred ccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEE
Confidence 1 0 00100000 00000 00112 2234554433221100 0 0000 001122
Q ss_pred cccCCceEEEEeCC-CCe-EEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC------CCC
Q 017317 193 EAKPHGKLLKYDPS-LNE-TSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN------LPG 264 (373)
Q Consensus 193 ~~~~~g~l~~~d~~-~~~-~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~g 264 (373)
.+...+.|..+|.. +++ ...+.......+.++|+|+++ .+++...++.|..+++.... ....+... ...
T Consensus 223 sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~~--~~~~~~~~~~~~~~~~~ 299 (380)
T 3iz6_a 223 SGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTGH--QLQVYNREPDRNDNELP 299 (380)
T ss_dssp EEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTTE--EEEEECCCCSSSCCSSC
T ss_pred EEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCCc--EEEEecccccccccccC
Confidence 23345677777764 222 223322233457899999998 55666667788888875432 11222111 011
Q ss_pred CCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceec
Q 017317 265 GPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMS 343 (373)
Q Consensus 265 ~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~ 343 (373)
....++++++|++.++.... +.+..+| ..++.+..+......+..
T Consensus 300 ~v~~~~~s~~g~~l~~g~~d----------------------------------g~i~vwd~~~~~~~~~~~~~~~~h~~ 345 (380)
T 3iz6_a 300 IVTSVAFSISGRLLFAGYSN----------------------------------GDCYVWDTLLAEMVLNLGTLQNSHEG 345 (380)
T ss_dssp SCSEEEECSSSSEEEEECTT----------------------------------SCEEEEETTTCCEEEEECCSCSSCCC
T ss_pred ceEEEEECCCCCEEEEEECC----------------------------------CCEEEEECCCCceEEEEecccCCCCC
Confidence 24568899999877665432 2356666 356666666332222234
Q ss_pred ceeEEEEe-CC-EEEEeeCCCCeEEEeeCC
Q 017317 344 FVTSALEF-DD-HLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 344 ~~~~~~~~-~g-~L~vgs~~~~~i~~~~l~ 371 (373)
.++.+... ++ .|..|+. ...|...++.
T Consensus 346 ~v~~l~~s~dg~~l~sgs~-D~~i~iW~~~ 374 (380)
T 3iz6_a 346 RISCLGLSSDGSALCTGSW-DKNLKIWAFS 374 (380)
T ss_dssp CCCEEEECSSSSEEEEECT-TSCEEEEECC
T ss_pred ceEEEEECCCCCEEEEeeC-CCCEEEEecC
Confidence 57777776 34 4555554 3346666554
No 175
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.51 E-value=9.1e-05 Score=68.58 Aligned_cols=139 Identities=6% Similarity=-0.176 Sum_probs=86.2
Q ss_pred CCEEEEec--CC---eEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEEC----------CCcEEEEe-cCC--c
Q 017317 88 GVLYTATR--DG---WIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDA----------DKGLLKVT-EEG--V 147 (373)
Q Consensus 88 G~l~v~~~--~g---~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~----------~~gl~~~~-~~g--~ 147 (373)
..+|+.+. .+ .|.++| .+++...... .+... ++++++||+ |||++. .+.+..+| .+. .
T Consensus 33 ~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~-~g~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~ 110 (373)
T 2mad_H 33 RRSYINLPAHHSAIIQQWVLDAGSGSILGHVN-GGFLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPI 110 (373)
T ss_pred CEEEEeCCcccCCccEEEEEECCCCeEEEEec-CCCCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEE
Confidence 34777653 22 778888 4455432222 23445 899999995 899863 23466787 444 2
Q ss_pred EEEeeccCCc--cccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEE
Q 017317 148 TVLASHVNGS--RINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVA 224 (373)
Q Consensus 148 ~~l~~~~~~~--~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~ 224 (373)
..+....... ....|..++++||| .||+++.. ..+.|..+| ++++.... -...+..+.
T Consensus 111 ~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~----------------~~~~v~viD-~t~~~~~~--~i~~~~~~~ 171 (373)
T 2mad_H 111 ADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA----------------AGPAVGLVV-QGGSSDDQ--LLSSPTCYH 171 (373)
T ss_pred EEEECCCccccccCCCccceEECCCCCEEEEEecC----------------CCCeEEEEE-CCCCEEeE--EcCCCceEE
Confidence 2221110000 01357899999999 58988632 135799999 88765432 023445567
Q ss_pred EccCCCEEEEEeCCCCeEEEEEe
Q 017317 225 LSKDEDYLVVCETFKFRCLKYWL 247 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~~i~~~~~ 247 (373)
+.++++..|++.+..+++..++.
T Consensus 172 ~~~~~~~~~~~~~~dg~~~~vd~ 194 (373)
T 2mad_H 172 IHPGAPSTFYLLCAQGGLAKTDH 194 (373)
T ss_pred EEeCCCceEEEEcCCCCEEEEEC
Confidence 77888778888888888888876
No 176
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.50 E-value=0.00021 Score=66.45 Aligned_cols=177 Identities=8% Similarity=-0.001 Sum_probs=111.7
Q ss_pred CcceEEEecCCCEE-EEecCCeEEEEE-cCCce-EEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cC-C--cEEE
Q 017317 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTW-ENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EE-G--VTVL 150 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~-~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~-g--~~~l 150 (373)
...++++.++|.+. +++.+|.|..++ .+++. ..+........ .+.+++ ..|+.+...+.+..++ .. + ...+
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~ 213 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVG-CLSWNR-HVLSSGSRSGAIHHHDVRIANHQIGTL 213 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEEET-TEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceE-EEEECC-CEEEEEcCCCCEEEEecccCcceeeEE
Confidence 35678888877655 777899999998 44443 33332234445 777743 3455566555567777 42 3 2222
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCcceEEEccCC
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFANGVALSKDE 229 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~~gi~~~~dg 229 (373)
... ...+.++++.++|.+.++.+. .+.|..+|..+++..... ........++++|++
T Consensus 214 ~~~-----~~~v~~~~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~ 271 (401)
T 4aez_A 214 QGH-----SSEVCGLAWRSDGLQLASGGN-----------------DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQ 271 (401)
T ss_dssp ECC-----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTS
T ss_pred cCC-----CCCeeEEEEcCCCCEEEEEeC-----------------CCeEEEccCCCCCccEEecCCcceEEEEEECCCC
Confidence 211 135778999999987666432 467888998766554333 333456789999988
Q ss_pred CEEEEEeC--CCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 230 DYLVVCET--FKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 230 ~~l~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
..++++.. .++.|..|++..... ...+. .......+++.++|++.+++.
T Consensus 272 ~~ll~~~~gs~d~~i~i~d~~~~~~--~~~~~--~~~~v~~~~~s~~~~~l~~~~ 322 (401)
T 4aez_A 272 SNLLATGGGTMDKQIHFWNAATGAR--VNTVD--AGSQVTSLIWSPHSKEIMSTH 322 (401)
T ss_dssp TTEEEEECCTTTCEEEEEETTTCCE--EEEEE--CSSCEEEEEECSSSSEEEEEE
T ss_pred CCEEEEecCCCCCEEEEEECCCCCE--EEEEe--CCCcEEEEEECCCCCeEEEEe
Confidence 87888754 577888898754321 12221 223466788899998777754
No 177
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.50 E-value=4.8e-06 Score=76.89 Aligned_cols=88 Identities=3% Similarity=-0.217 Sum_probs=55.9
Q ss_pred CCEEEEec-CC----eEEEEE-cCCceEEeeeecCccccCeEECCCC-cEEEEEC----------CCcEEEEe-cCC--c
Q 017317 88 GVLYTATR-DG----WIKRLH-KNGTWENWKLIGGDTLLGITTTQEN-EILVCDA----------DKGLLKVT-EEG--V 147 (373)
Q Consensus 88 G~l~v~~~-~g----~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g-~L~va~~----------~~gl~~~~-~~g--~ 147 (373)
.++|+.+. .+ .|..+| .+++.......+..| ++++++|| .+||++. .+.|..+| .++ .
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv 109 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPI 109 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEE
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEE
Confidence 56887664 33 788898 445544333344555 79999999 5999973 23477788 555 3
Q ss_pred EEEeeccCCc---cccccceeEEcCCC-cEEEEeC
Q 017317 148 TVLASHVNGS---RINLADDLIAATDG-SIYFSVA 178 (373)
Q Consensus 148 ~~l~~~~~~~---~~~~~~~l~~~~dG-~l~v~~~ 178 (373)
..+... .+. ....|..++++||| .+||++.
T Consensus 110 ~~I~v~-~~~~~~~g~~P~~ia~SpDGk~lyVan~ 143 (368)
T 1mda_H 110 ADIELP-DAPRFSVGPRVHIIGNCASSACLLFFLF 143 (368)
T ss_dssp EEEEET-TSCSCCBSCCTTSEEECTTSSCEEEEEC
T ss_pred EEEECC-CccccccCCCcceEEEcCCCCEEEEEcc
Confidence 333211 011 12468899999999 6999864
No 178
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.49 E-value=4.5e-05 Score=68.44 Aligned_cols=213 Identities=13% Similarity=0.197 Sum_probs=126.9
Q ss_pred EEEecCCCEEEEe--cCCeEEEEEcCCc-eEEeeeecCccccCeEECCCCcEEEEECC--------------CcEEEEec
Q 017317 82 VCVDRNGVLYTAT--RDGWIKRLHKNGT-WENWKLIGGDTLLGITTTQENEILVCDAD--------------KGLLKVTE 144 (373)
Q Consensus 82 ia~d~~G~l~v~~--~~g~I~~~~~~g~-~~~~~~~~~~p~~gl~~d~~g~L~va~~~--------------~gl~~~~~ 144 (373)
++.+ ++.||+.. .+++|++++.+|. .+.+.. ..+. .|..+ ++.||.+... ..|++++.
T Consensus 21 ~~~~-g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~--~~~~-~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~ 95 (302)
T 3s25_A 21 FCES-DGEVFFSNTNDNGRLYAMNIDGSNIHKLSN--DTAM-YINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKR 95 (302)
T ss_dssp EEEE-TTEEEEEEGGGTTEEEEEETTSCSCEEEEE--EEEE-EEEEC-SSEEEEEEECC------CCSSCCSEEEEEEET
T ss_pred EEEe-CCEEEEEeCCCCceEEEEcCCCCCCEEccC--Ccee-eEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeC
Confidence 4444 88999765 4689999998874 343332 2234 55554 3457665332 35788884
Q ss_pred CC--cEEEeeccCCccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcc
Q 017317 145 EG--VTVLASHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFAN 221 (373)
Q Consensus 145 ~g--~~~l~~~~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~ 221 (373)
+| .+.+... . +.++.++| .||+++.+ ......|++++.++...+.+.....
T Consensus 96 dg~~~~~l~~~-~--------~~~~s~~g~~Iy~~~~~--------------~~~~~~Iy~~~~dGs~~~~lt~~~~--- 149 (302)
T 3s25_A 96 NGHGSTVLDPD-P--------CIYASLIGNYIYYLHYD--------------TQTATSLYRIRIDGEEKKKIKNHYL--- 149 (302)
T ss_dssp TSCCCEEEECS-C--------EEEEEEETTEEEEEEES--------------SSSCEEEEEEETTSCCCEEEESSCC---
T ss_pred CCCcceEeecC-C--------ccEEEEeCCEEEEEeec--------------CCCCceEEEEECCCCCeEEEeCCCc---
Confidence 44 4554321 1 12344444 79998710 0124689999998766666544322
Q ss_pred eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCC-CEEEEEecCCCchhhhccCChHHHH
Q 017317 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDG-SFWIAILQLSSPGLEFVHTSKATKH 300 (373)
Q Consensus 222 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG-~lwva~~~~~~~~~~~~~~~p~~~~ 300 (373)
.+++++++.|||++.+...|++.+++|.. .+.+... +....+.++| .||.+.+...
T Consensus 150 -~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~---~~~l~~~----~~~~~~~P~g~~iy~t~~~~~--------------- 206 (302)
T 3s25_A 150 -FTCNTSDRYFYYNNPKNGQLYRYDTASQS---EALFYDC----NCYKPVVLDDTNVYYMDVNRD--------------- 206 (302)
T ss_dssp -CCSEEETTEEEEECTTTCCEEEEETTTTE---EEEEECS----CEEEEEEEETTEEEEEEGGGT---------------
T ss_pred -eEeeEECCEEEEEeCCCceEEEEECCCCC---EEEEeCC----CccceeeecCCEEEEEEcCCC---------------
Confidence 45688999999999878899999987642 2222211 2233455545 5666655431
Q ss_pred HHHhcchhhhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEEeCCEEEEee-CCCCeEEEeeCCC
Q 017317 301 LLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGS-LNTNFIGKLPLKA 372 (373)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs-~~~~~i~~~~l~~ 372 (373)
..|.+.+.+|.....+.+.. ...+...+++||..+ ...+.|.+++++.
T Consensus 207 ------------------~~I~~~~ldG~~~~~Lt~~~------~~~~~~~g~~Iy~~~~~~~~~i~~~~~DG 255 (302)
T 3s25_A 207 ------------------NAIVHVNINNPNPVVLTEAN------IEHYNVYGSLIFYQRGGDNPALCVVKNDG 255 (302)
T ss_dssp ------------------TEEEEECSSSCCCEECSCSC------EEEEEEETTEEEEEECSSSCEEEEEETTS
T ss_pred ------------------cEEEEEECCCCCeEEEeCCC------cceEEECCCEEEEEECCCCcEEEEEECCC
Confidence 13677787777666654311 123555567787763 3457788877765
No 179
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.49 E-value=5.1e-05 Score=76.08 Aligned_cols=164 Identities=14% Similarity=0.119 Sum_probs=94.0
Q ss_pred CeEEEEEc-CCceEEeeee---cCccccCeEECCCCc-EEEEECCC-----cEEEEe-cCC--cEEEeeccCCccccccc
Q 017317 97 GWIKRLHK-NGTWENWKLI---GGDTLLGITTTQENE-ILVCDADK-----GLLKVT-EEG--VTVLASHVNGSRINLAD 163 (373)
Q Consensus 97 g~I~~~~~-~g~~~~~~~~---~~~p~~gl~~d~~g~-L~va~~~~-----gl~~~~-~~g--~~~l~~~~~~~~~~~~~ 163 (373)
..|+.++. +++....... ...+. .+++.+||+ |+++.... .++.++ .+| .+.+.............
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~ 313 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLT-NLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLH 313 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEE-EEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCS
T ss_pred eEEEEEECCCCceEeeccCCCCceeEe-eEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccC
Confidence 56788884 4444333211 12345 788999997 66543322 577788 555 33333221111111235
Q ss_pred eeEEcC--CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcce-EEEccCCCEEEEEeCCCC
Q 017317 164 DLIAAT--DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANG-VALSKDEDYLVVCETFKF 240 (373)
Q Consensus 164 ~l~~~~--dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~g-i~~~~dg~~l~v~~~~~~ 240 (373)
.+++.+ ||+++++... .....||.++.+++..+.+..+...... +++++||+.++++....+
T Consensus 314 ~~~~sp~~dg~~l~~~~~---------------~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 314 PLTFLPGSNNQFIWQSRR---------------DGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp CCEECTTCSSEEEEEECT---------------TSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred CceeecCCCCEEEEEEcc---------------CCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence 789999 9975544321 1235799999766666555433222334 789999999998876654
Q ss_pred ----eEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEE
Q 017317 241 ----RCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (373)
Q Consensus 241 ----~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~ 281 (373)
.|++++.++... ..+. . ......+++++||+.++..
T Consensus 379 ~~~~~l~~~d~~~~~~---~~l~-~-~~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 379 PLERHFYCIDIKGGKT---KDLT-P-ESGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp TTCBEEEEEETTCCCC---EESC-C-SSSEEEEEECTTSSEEEEE
T ss_pred CceEEEEEEEcCCCCc---eecc-C-CCceEEEEECCCCCEEEEE
Confidence 788887655321 2221 1 1224457788899865544
No 180
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.48 E-value=1.2e-05 Score=75.10 Aligned_cols=176 Identities=14% Similarity=0.098 Sum_probs=100.0
Q ss_pred EecCCCEEEEecCCeEEEEEc-C-C-ceEEee--eecCccccCeEECC--CCcEEEEECCC----cEEEEecCC--cEEE
Q 017317 84 VDRNGVLYTATRDGWIKRLHK-N-G-TWENWK--LIGGDTLLGITTTQ--ENEILVCDADK----GLLKVTEEG--VTVL 150 (373)
Q Consensus 84 ~d~~G~l~v~~~~g~I~~~~~-~-g-~~~~~~--~~~~~p~~gl~~d~--~g~L~va~~~~----gl~~~~~~g--~~~l 150 (373)
.|.+|.||+++..| +++++. + | .++... ....... +|++|+ ++.||++.... +|++.+..| .+.+
T Consensus 19 ~d~~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~-~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~ 96 (394)
T 3b7f_A 19 ESGPVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIH-HIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEA 96 (394)
T ss_dssp CCSCCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEE-EEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEEC
T ss_pred CCCCCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceE-EEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceEC
Confidence 45578999999765 777764 3 2 455432 1123456 899998 78999987544 688776544 4544
Q ss_pred eec--cCCc-------cccccceeEEcC---CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC--
Q 017317 151 ASH--VNGS-------RINLADDLIAAT---DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-- 216 (373)
Q Consensus 151 ~~~--~~~~-------~~~~~~~l~~~~---dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-- 216 (373)
... .... ....+.+|++++ .+.||++... ++|++.+..+...+.+...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~------------------ggl~~S~DgG~tW~~~~~~~~ 158 (394)
T 3b7f_A 97 TRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSP------------------QGLFRSTDHGASWEPVAGFND 158 (394)
T ss_dssp SBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEET------------------TEEEEESSTTSBCEECHHHHT
T ss_pred CccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecC------------------CcEEEEcCCCCCeEECcCccC
Confidence 321 1111 112345688885 5789997532 6899987665555554221
Q ss_pred ---------------CC--CcceEEEcc-CCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCC-----C-------CCC
Q 017317 217 ---------------LF--FANGVALSK-DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENL-----P-------GGP 266 (373)
Q Consensus 217 ---------------~~--~~~gi~~~~-dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----~-------g~p 266 (373)
.. ....|++++ +.+.+|++.. ...|++..-.|. +.+.+.... + ...
T Consensus 159 ~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~-~ggl~~s~DgG~---tW~~~~~~~~~~~~p~~~~~~g~~~ 234 (394)
T 3b7f_A 159 HPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMS-SGGVFESTDAGT---DWKPLNRGCAANFLPDPNVEFGHDP 234 (394)
T ss_dssp CTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEE-TBEEEEESSTTS---SCEECCTTCCCTTSSSSSSSSCBCE
T ss_pred CccccccccccccCCCCCCceeEEEECCCCCCEEEEEEC-CCCEEEECCCCC---CceECCCCccccccCCCccccCcce
Confidence 00 113577776 3455888753 345777642232 222221111 1 012
Q ss_pred CceeECCC--CCEEEEEec
Q 017317 267 DNIKLAPD--GSFWIAILQ 283 (373)
Q Consensus 267 ~~i~~d~d--G~lwva~~~ 283 (373)
..++++++ +.+|+++..
T Consensus 235 ~~i~~~~~~~~~l~vg~~~ 253 (394)
T 3b7f_A 235 HCVVQHPAAPDILYQQNHC 253 (394)
T ss_dssp EEEEECSSSTTEEEEEETT
T ss_pred eEEEECCCCCCEEEEEcCC
Confidence 34677776 789998754
No 181
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.47 E-value=7.8e-05 Score=70.55 Aligned_cols=152 Identities=8% Similarity=0.042 Sum_probs=93.8
Q ss_pred CcceEEEecCCCEE--EEecCCeEEEEE-c--CCceE-Eee--eecCccccCeEECCCCc-EEEEECCCcEEEEe-cCC-
Q 017317 78 GPEDVCVDRNGVLY--TATRDGWIKRLH-K--NGTWE-NWK--LIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG- 146 (373)
Q Consensus 78 ~P~~ia~d~~G~l~--v~~~~g~I~~~~-~--~g~~~-~~~--~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g- 146 (373)
...++++.++|..+ ++..+|.|..++ . +++.. .+. .....+. +++++++|+ |++++....++.++ .++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPN-AISIAEDDTTVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCce-EEEEcCCCCEEEEEeCCCcEEEEecCCcc
Confidence 46788999988763 566889999888 3 45433 222 2235566 899999996 55566545577777 444
Q ss_pred cEE-EeeccCCccccccceeEEcCC---CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEE-Eee-cCCCCc
Q 017317 147 VTV-LASHVNGSRINLADDLIAATD---GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-ILL-DSLFFA 220 (373)
Q Consensus 147 ~~~-l~~~~~~~~~~~~~~l~~~~d---G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~-~~~~~~ 220 (373)
... ......+ ....+.++++.++ |.+.++.+. .+.|..+|..+++.. .+. ......
T Consensus 183 ~~~~~~~~~~~-h~~~v~~~~~sp~~~~~~~l~s~~~-----------------d~~i~vwd~~~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 183 EEKFTQEPILG-HVSMLTDVHLIKDSDGHQFIITSDR-----------------DEHIKISHYPQCFIVDKWLFGHKHFV 244 (450)
T ss_dssp CSSCCCCCSEE-CSSCEEEEEEEECTTSCEEEEEEET-----------------TSCEEEEEESCTTCEEEECCCCSSCE
T ss_pred cccccceeeec-ccCceEEEEEcCCCCCCcEEEEEcC-----------------CCcEEEEECCCCceeeeeecCCCCce
Confidence 211 0001111 1235778999999 866665432 356777776655433 323 223445
Q ss_pred ceEEEccCCCEEEEEeCCCCeEEEEEecCC
Q 017317 221 NGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (373)
Q Consensus 221 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~ 250 (373)
..++|+ +++.++.+ ..++.|..|++...
T Consensus 245 ~~~~~s-d~~~l~s~-~~d~~v~vwd~~~~ 272 (450)
T 2vdu_B 245 SSICCG-KDYLLLSA-GGDDKIFAWDWKTG 272 (450)
T ss_dssp EEEEEC-STTEEEEE-ESSSEEEEEETTTC
T ss_pred EEEEEC-CCCEEEEE-eCCCeEEEEECCCC
Confidence 789999 99855555 46678888887643
No 182
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.47 E-value=6.9e-05 Score=70.54 Aligned_cols=185 Identities=11% Similarity=0.073 Sum_probs=111.3
Q ss_pred CCcceEEEecC-CCEE-EEecCCeEEEEEc-C----------Cc-eEEeeeecCccccCeEECCCCc-EEE-EECCCcEE
Q 017317 77 NGPEDVCVDRN-GVLY-TATRDGWIKRLHK-N----------GT-WENWKLIGGDTLLGITTTQENE-ILV-CDADKGLL 140 (373)
Q Consensus 77 ~~P~~ia~d~~-G~l~-v~~~~g~I~~~~~-~----------g~-~~~~~~~~~~p~~gl~~d~~g~-L~v-a~~~~gl~ 140 (373)
..+.++++.++ +.++ +++.+|.|..++. . .+ ...+........ ++++++++. +++ +...+.|.
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~l~s~~~dg~i~ 207 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGY-GLSWNPNLNGYLLSASDDHTIC 207 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCC-CEEECTTSTTEEEEECTTSCEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeE-EEEeCCCCCCeEEEEeCCCeEE
Confidence 45788999986 5454 6778899999982 2 11 222222334456 999998886 555 44444566
Q ss_pred EEe-cCC---cEEEe--eccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe----
Q 017317 141 KVT-EEG---VTVLA--SHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE---- 209 (373)
Q Consensus 141 ~~~-~~g---~~~l~--~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---- 209 (373)
.++ ..+ ...+. ....+ ....+.++++.+ ++.++++.+. .+.|..+|..++.
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~-----------------dg~i~i~d~~~~~~~~~ 269 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFTG-HTAVVEDVAWHLLHESLFGSVAD-----------------DQKLMIWDTRNNNTSKP 269 (430)
T ss_dssp EEETTSCCBGGGEEECSEEECC-CSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEETTCSCSSSC
T ss_pred EEeCCCCCCCCceeccceeecC-CCCCEeeeEEeCCCCCEEEEEeC-----------------CCeEEEEECCCCCCCcc
Confidence 777 442 11111 11111 123578899998 5677766543 4788888887552
Q ss_pred EEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEe
Q 017317 210 TSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (373)
Q Consensus 210 ~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~ 282 (373)
...+.......+.++|+++++.++++....+.|..|++..... ....+. ...+....+++.++|. ++++..
T Consensus 270 ~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~-~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 270 SHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKL-KLHSFE-SHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp SEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS-CSEEEE-CCSSCEEEEEECSSCTTEEEEEE
T ss_pred eeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCC-CeEEee-cCCCCEEEEEECCCCCCEEEEEe
Confidence 2223233345678999999987787777788899999764221 122222 1223456688889884 455443
No 183
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.47 E-value=0.00013 Score=68.26 Aligned_cols=226 Identities=12% Similarity=0.108 Sum_probs=132.8
Q ss_pred CcceEEEecCCCEE-EEecCCeEEEEEc-CCce-EEeeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC--cEEE
Q 017317 78 GPEDVCVDRNGVLY-TATRDGWIKRLHK-NGTW-ENWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG--VTVL 150 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~g~I~~~~~-~g~~-~~~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g--~~~l 150 (373)
...++++.++|.+. +++.++.|..++. .++. ..+........ .+++.++|+.++ +...+.+..++ .++ ...+
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~-~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS-SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 35678888888766 6778899999984 3332 22222233455 889999987555 45545566677 666 3333
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcceEEEccC-
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVALSKD- 228 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~gi~~~~d- 228 (373)
... ...+..+.+.++|.+.++.+. .+.|..+|..+++....... ......++|+|+
T Consensus 231 ~~h-----~~~v~~~~~~~~g~~l~s~s~-----------------D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 288 (410)
T 1vyh_C 231 TGH-----REWVRMVRPNQDGTLIASCSN-----------------DQTVRVWVVATKECKAELREHRHVVECISWAPES 288 (410)
T ss_dssp ECC-----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSC
T ss_pred eCC-----CccEEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCceeeEecCCCceEEEEEEcCcc
Confidence 211 124678889999988777543 46787888776665443322 233456778775
Q ss_pred -------------------CCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchh
Q 017317 229 -------------------EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGL 289 (373)
Q Consensus 229 -------------------g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~ 289 (373)
+. ++++...++.|..|++.... ....+. .-......++++++|++.++....
T Consensus 289 ~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~~--~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~D----- 359 (410)
T 1vyh_C 289 SYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTGM--CLMTLV-GHDNWVRGVLFHSGGKFILSCADD----- 359 (410)
T ss_dssp GGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSCEEEEETT-----
T ss_pred cccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCCc--eEEEEE-CCCCcEEEEEEcCCCCEEEEEeCC-----
Confidence 44 45555567788888865421 112222 122335568889999765554322
Q ss_pred hhccCChHHHHHHHhcchhhhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeEEEEeC-C-EEEEeeCCCCeEE
Q 017317 290 EFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTSALEFD-D-HLYLGSLNTNFIG 366 (373)
Q Consensus 290 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~~~-g-~L~vgs~~~~~i~ 366 (373)
+.+..+|. .++.+..+.... ..++.+.... + .|..|+. ...|.
T Consensus 360 -----------------------------~~i~vwd~~~~~~~~~~~~h~----~~v~~l~~~~~~~~l~sgs~-D~~i~ 405 (410)
T 1vyh_C 360 -----------------------------KTLRVWDYKNKRCMKTLNAHE----HFVTSLDFHKTAPYVVTGSV-DQTVK 405 (410)
T ss_dssp -----------------------------TEEEEECCTTSCCCEEEECCS----SCEEEEEECSSSSCEEEEET-TSEEE
T ss_pred -----------------------------CeEEEEECCCCceEEEEcCCC----CcEEEEEEcCCCCEEEEEeC-CCcEE
Confidence 23566663 456566665433 3477777764 3 4554554 33454
Q ss_pred Eee
Q 017317 367 KLP 369 (373)
Q Consensus 367 ~~~ 369 (373)
..+
T Consensus 406 vW~ 408 (410)
T 1vyh_C 406 VWE 408 (410)
T ss_dssp EEC
T ss_pred EEe
Confidence 443
No 184
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.47 E-value=1.5e-06 Score=83.38 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=56.2
Q ss_pred ccccccceeEEcCCCcEEE-EeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC--CCCcceEEEccCCCEEE
Q 017317 157 SRINLADDLIAATDGSIYF-SVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVALSKDEDYLV 233 (373)
Q Consensus 157 ~~~~~~~~l~~~~dG~l~v-~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~~gi~~~~dg~~l~ 233 (373)
..++.|++|++|++|+||| +|.+ ++.. ...+...+..||++++++++++.++.. ...++|++|+||++.||
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~--~~~~----g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLf 546 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGD--SSNA----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLF 546 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCC--CCCS----GGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEE
T ss_pred CccCCCCceEECCCCCEEEEeCCC--cCcc----ccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEE
Confidence 4678999999999999999 6654 2211 111222445899999998998887754 46789999999999999
Q ss_pred EEe
Q 017317 234 VCE 236 (373)
Q Consensus 234 v~~ 236 (373)
|+-
T Consensus 547 V~v 549 (592)
T 4a9v_A 547 VGI 549 (592)
T ss_dssp EEE
T ss_pred EEE
Confidence 984
No 185
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.46 E-value=0.00036 Score=62.74 Aligned_cols=183 Identities=14% Similarity=0.079 Sum_probs=106.1
Q ss_pred CCcCCcceEEEecCC-C-EEEEecCCeEEEEEcCC---c----eEEeeeecCccccCeEECCCCcEEEE-ECCCcEEEEe
Q 017317 74 GILNGPEDVCVDRNG-V-LYTATRDGWIKRLHKNG---T----WENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT 143 (373)
Q Consensus 74 g~~~~P~~ia~d~~G-~-l~v~~~~g~I~~~~~~g---~----~~~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~ 143 (373)
|--....++++.+++ + |..++.++.|..++..+ + ...+........ .+++.++|++.++ ...+.+..++
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~-~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ-DCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEE
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEE-EEEECCCCCEEEEEeCCCEEEEEE
Confidence 434445678888743 4 55788899998887321 1 112222223445 7889999976554 5445566677
Q ss_pred -cCC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc
Q 017317 144 -EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA 220 (373)
Q Consensus 144 -~~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ 220 (373)
.++ ...+... ...+.++++.++|.+.++.+. .+.|..+|..+.....+.......
T Consensus 94 ~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~s~s~-----------------D~~i~vwd~~~~~~~~~~~h~~~v 151 (319)
T 3frx_A 94 VATGETYQRFVGH-----KSDVMSVDIDKKASMIISGSR-----------------DKTIKVWTIKGQCLATLLGHNDWV 151 (319)
T ss_dssp TTTTEEEEEEECC-----SSCEEEEEECTTSCEEEEEET-----------------TSCEEEEETTSCEEEEECCCSSCE
T ss_pred CCCCCeeEEEccC-----CCcEEEEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCeEEEEeccCCcE
Confidence 666 3333211 134678999999987777543 366777777655444443333344
Q ss_pred ceEEEccCCC-----EEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 221 NGVALSKDED-----YLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 221 ~gi~~~~dg~-----~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
..+.+.|.+. .++++...++.|..+++.... ....+. .-......+++.++|++.++..
T Consensus 152 ~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~-~h~~~v~~~~~sp~g~~l~s~~ 215 (319)
T 3frx_A 152 SQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ--IEADFI-GHNSNINTLTASPDGTLIASAG 215 (319)
T ss_dssp EEEEECCC------CCEEEEEETTSCEEEEETTTTE--EEEEEC-CCCSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch--hheeec-CCCCcEEEEEEcCCCCEEEEEe
Confidence 5677776432 145555566778888865321 111221 1123345678899998766544
No 186
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.45 E-value=9.1e-05 Score=73.19 Aligned_cols=186 Identities=10% Similarity=0.015 Sum_probs=108.1
Q ss_pred CCcceEEEecCCCEEEEecCCeEEEEEc-CCce-EEeeeecCccccCeEECCCCcEEEE-ECCCcEEEEe-cCC-cEEEe
Q 017317 77 NGPEDVCVDRNGVLYTATRDGWIKRLHK-NGTW-ENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG-VTVLA 151 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~g~I~~~~~-~g~~-~~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~g-~~~l~ 151 (373)
..|..++++|+|+..+...++.|..++. +++. ..+........ .+++.++|++.++ ...+.+..+| .++ .....
T Consensus 19 g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~-~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~ 97 (611)
T 1nr0_A 19 GTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTT-VAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKT 97 (611)
T ss_dssp TCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEESSSTTCCEEE
T ss_pred CceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceE-EEEECCCCcEEEEEeCCCCEEEeECCCCcceeeE
Confidence 4578889999998775444668888883 4443 33333334456 8999999987664 4444455666 444 21111
Q ss_pred eccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCE
Q 017317 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDY 231 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~ 231 (373)
. ..+. ...+.+++++|||...++.+.. ....+.|+.+|.. .....+.......+.++|+|++..
T Consensus 98 ~-~~~~-~~~v~~v~fs~dg~~l~~~~~~-------------~~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~ 161 (611)
T 1nr0_A 98 T-IPVF-SGPVKDISWDSESKRIAAVGEG-------------RERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPF 161 (611)
T ss_dssp E-EECS-SSCEEEEEECTTSCEEEEEECC-------------SSCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSC
T ss_pred e-eccc-CCceEEEEECCCCCEEEEEECC-------------CCceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCe
Confidence 1 1111 1357899999999876654320 0112567777743 222222222234578999999886
Q ss_pred EEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 232 LVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 232 l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
++++...++.|..|+.... .....+. .-......+++.++|++.++..
T Consensus 162 ~l~s~s~D~~v~lwd~~~~--~~~~~l~-~H~~~V~~v~fspdg~~las~s 209 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEGPPF--KFKSTFG-EHTKFVHSVRYNPDGSLFASTG 209 (611)
T ss_dssp EEEEEETTSCEEEEETTTB--EEEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCC--eEeeeec-cccCceEEEEECCCCCEEEEEE
Confidence 6777667777888874321 1111221 1123455688999998766554
No 187
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.44 E-value=3.4e-05 Score=71.07 Aligned_cols=154 Identities=10% Similarity=-0.046 Sum_probs=90.2
Q ss_pred eEEEecCCC-EEEEecCCeEEEEE-cCCceEEeeeecCc-cc-cCeEECCCCcEEEEE----------------------
Q 017317 81 DVCVDRNGV-LYTATRDGWIKRLH-KNGTWENWKLIGGD-TL-LGITTTQENEILVCD---------------------- 134 (373)
Q Consensus 81 ~ia~d~~G~-l~v~~~~g~I~~~~-~~g~~~~~~~~~~~-p~-~gl~~d~~g~L~va~---------------------- 134 (373)
++++.++|+ |++...++.|+.++ ..|+.+.+...... .. ....++++|+++++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 467888886 55666677899999 44554433322221 11 023347888876642
Q ss_pred -CCCcEEEEe-cCC-cEEEeeccCCccccccceeEEcC-CCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCe
Q 017317 135 -ADKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAAT-DGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE 209 (373)
Q Consensus 135 -~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~-dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 209 (373)
....|+.++ .+| .+.+.... ....++.++| ||. |.+..... .......|+.+|.++++
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~~-----~~~~~~~~sp~dg~~l~~~~~~~------------~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQEN-----QWLGHPIYRPYDDSTVAFCHEGP------------HDLVDARMWLINEDGTN 227 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEES-----SCEEEEEEETTEEEEEEEEECSC------------TTTSSCSEEEEETTSCC
T ss_pred CCcceEEEEECCCCceEEeecCC-----ccccccEECCCCCCEEEEEEecC------------CCCCcceEEEEeCCCCc
Confidence 123578888 667 55554321 2356789999 985 44443210 00113579999988776
Q ss_pred EEEeecCCC--CcceEEEccCCCEEEE-EeCCCC---eEEEEEecCCC
Q 017317 210 TSILLDSLF--FANGVALSKDEDYLVV-CETFKF---RCLKYWLKGES 251 (373)
Q Consensus 210 ~~~~~~~~~--~~~gi~~~~dg~~l~v-~~~~~~---~i~~~~~~~~~ 251 (373)
.+.+..... .....+|+|||+.|++ +..... .|+++++.+.+
T Consensus 228 ~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 228 MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 666544321 2345789999997754 443222 38888876543
No 188
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=98.44 E-value=2.5e-06 Score=71.78 Aligned_cols=157 Identities=12% Similarity=0.026 Sum_probs=96.3
Q ss_pred cccceeEeccCCcCCcceEEEecCCCEEEEecCCeEEEEEc-CCce-------EEeeeec-CccccCeEECCCCcEEEEE
Q 017317 64 DIQSVTRLGEGILNGPEDVCVDRNGVLYTATRDGWIKRLHK-NGTW-------ENWKLIG-GDTLLGITTTQENEILVCD 134 (373)
Q Consensus 64 ~l~~~~~~~~g~~~~P~~ia~d~~G~l~v~~~~g~I~~~~~-~g~~-------~~~~~~~-~~p~~gl~~d~~g~L~va~ 134 (373)
.+.++.++..+.+.....++++|+|.||+. .+|.++++++ ++.- +.+-... ..-. .+.+|++|.||+..
T Consensus 28 ~~~~a~~iG~~gw~~~~~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~-a~~fD~~G~LYav~ 105 (236)
T 1tl2_A 28 WLARATLIGKGGWSNFKFLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQ-FLFFDPNGYLYAVS 105 (236)
T ss_dssp HHHHSEEEESSSCTTCSEEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCS-EEEECTTSCEEEEE
T ss_pred hhhhccccCccccccceeEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccce-EEEECCCCCEEEeC
Confidence 445677888766778899999999999976 8899999984 4221 2221111 1113 78899999999985
Q ss_pred CCCcEEEEe-c-CC-cEEEee--ccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe
Q 017317 135 ADKGLLKVT-E-EG-VTVLAS--HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE 209 (373)
Q Consensus 135 ~~~gl~~~~-~-~g-~~~l~~--~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 209 (373)
. ..|++++ + ++ ...+.. .+..........|.++|+|.||..+ . +.+++-.+-++.
T Consensus 106 d-G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-d------------------g~lyr~~~P~~~ 165 (236)
T 1tl2_A 106 K-DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-G------------------QQFYKALPPVSN 165 (236)
T ss_dssp T-TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-T------------------TEEEEECCCSST
T ss_pred C-CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-C------------------CcEEecCCCCCC
Confidence 4 6688998 3 33 322211 1111122345789999999999886 4 556654332111
Q ss_pred -------EEEee-cCCCCcceEEEccCCCEEEEEeCCCCeEEEE
Q 017317 210 -------TSILL-DSLFFANGVALSKDEDYLVVCETFKFRCLKY 245 (373)
Q Consensus 210 -------~~~~~-~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~ 245 (373)
.+.+. .+...-.-+.+++++. ||.++ +.++++.
T Consensus 166 ~~~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~--~g~~Y~~ 206 (236)
T 1tl2_A 166 QDNWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ--GGKFYED 206 (236)
T ss_dssp TCCHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE--TTEEEEE
T ss_pred CcccccccceeccCCcceEEEEEECCCCc-EEEEe--CCeEEec
Confidence 11111 1111122355888887 77776 5577765
No 189
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.43 E-value=0.00031 Score=64.63 Aligned_cols=243 Identities=13% Similarity=0.014 Sum_probs=133.8
Q ss_pred cCCcCCcceEEEecCCCEEEEecCCeEEEEE-cCCc-------eEEeeeecCccccCeEECCC----C---cEEE-EECC
Q 017317 73 EGILNGPEDVCVDRNGVLYTATRDGWIKRLH-KNGT-------WENWKLIGGDTLLGITTTQE----N---EILV-CDAD 136 (373)
Q Consensus 73 ~g~~~~P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~-------~~~~~~~~~~p~~gl~~d~~----g---~L~v-a~~~ 136 (373)
.+.-....++++++ ..|++++.+|.|..++ ..++ ...+........ .+++.++ | ++++ +...
T Consensus 13 ~~h~~~i~~~~~~~-~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~g~~~~~l~s~~~d 90 (397)
T 1sq9_A 13 KAHDADIFSVSACN-SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH-HVDVLQAIERDAFELCLVATTSFS 90 (397)
T ss_dssp SCSSSCEEEEEECS-SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEE-EEEEEEEEETTTEEEEEEEEEETT
T ss_pred hhhhcCeEEEEecC-CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEE-EEEEecccccCCccccEEEEEcCC
Confidence 34344567788887 6777888999999999 4444 333333334445 8888888 7 6554 4554
Q ss_pred CcEEEEe-cCC-c--EEEeeccCCcc----ccccceeEEc----CCCcE-EEEeCCccccccccccccccccCCceEEEE
Q 017317 137 KGLLKVT-EEG-V--TVLASHVNGSR----INLADDLIAA----TDGSI-YFSVASTKFGLHNWGLDLLEAKPHGKLLKY 203 (373)
Q Consensus 137 ~gl~~~~-~~g-~--~~l~~~~~~~~----~~~~~~l~~~----~dG~l-~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 203 (373)
+.|..++ .++ . ..+.....+.. ...+..+++. ++|.. +++.+. .+.|..+
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-----------------dg~i~iw 153 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV-----------------KGTTYIW 153 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET-----------------TSCEEEE
T ss_pred CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC-----------------CCcEEEE
Confidence 5566666 433 2 11111112111 2457889999 99976 555432 3566666
Q ss_pred eCCC------C-eEE-----Eee-------cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC---
Q 017317 204 DPSL------N-ETS-----ILL-------DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--- 261 (373)
Q Consensus 204 d~~~------~-~~~-----~~~-------~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--- 261 (373)
|..+ + ... .+. ........+++++++ ++++...++.|..|++...+ ....+. .
T Consensus 154 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~--~~~~~~-~~~~ 228 (397)
T 1sq9_A 154 KFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLR--PLYNFE-SQHS 228 (397)
T ss_dssp EEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTE--EEEEEE-CCC-
T ss_pred eCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCc--eeEEEe-cccc
Confidence 6543 2 111 221 123346789999999 45555567789999875421 122222 1
Q ss_pred C---CCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCC
Q 017317 262 L---PGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDP 337 (373)
Q Consensus 262 ~---~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~ 337 (373)
. ......++++++|++.++.... ...+.+..+| .+++.+..+..+
T Consensus 229 h~~~~~~i~~i~~~~~~~~l~~~~~d-------------------------------~~~g~i~i~d~~~~~~~~~~~~~ 277 (397)
T 1sq9_A 229 MINNSNSIRSVKFSPQGSLLAIAHDS-------------------------------NSFGCITLYETEFGERIGSLSVP 277 (397)
T ss_dssp --CCCCCEEEEEECSSTTEEEEEEEE-------------------------------TTEEEEEEEETTTCCEEEEECBC
T ss_pred ccccCCccceEEECCCCCEEEEEecC-------------------------------CCCceEEEEECCCCcccceeccC
Confidence 1 3345678889999865554321 0013466677 457777776541
Q ss_pred CC---------ceecceeEEEEe-C-CEEEEeeCCCCeEEEeeCC
Q 017317 338 NG---------KVMSFVTSALEF-D-DHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 338 ~g---------~~~~~~~~~~~~-~-g~L~vgs~~~~~i~~~~l~ 371 (373)
.. .+...+..+... + ..|..++. ...|..+++.
T Consensus 278 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-dg~i~iwd~~ 321 (397)
T 1sq9_A 278 THSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW-DGKLRFWDVK 321 (397)
T ss_dssp --------CCBSBSSCEEEEEECSSSSEEEEEET-TSEEEEEETT
T ss_pred cccccccccccccCCcEEEEEECCCCCEEEEEeC-CCeEEEEEcC
Confidence 00 012356677765 3 35555553 4457777764
No 190
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.43 E-value=6.8e-05 Score=68.97 Aligned_cols=189 Identities=11% Similarity=0.069 Sum_probs=120.0
Q ss_pred cCCcceEEEecCCCEEEEe-c---------------CCeEEEEE-cCC--ce-EEeeee------cCccccCeEEC-C--
Q 017317 76 LNGPEDVCVDRNGVLYTAT-R---------------DGWIKRLH-KNG--TW-ENWKLI------GGDTLLGITTT-Q-- 126 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~-~---------------~g~I~~~~-~~g--~~-~~~~~~------~~~p~~gl~~d-~-- 126 (373)
+.+...+.+|+.|+||+-+ . ..+|+.+| .++ +. +.+... ..... .|++| .
T Consensus 86 lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~-di~VD~~~~ 164 (381)
T 3q6k_A 86 LTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFG-GFAVDVANP 164 (381)
T ss_dssp SSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEE-EEEEEESCT
T ss_pred eEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccc-eEEEecccC
Confidence 7788899999999999633 1 12688888 444 43 333211 12345 78888 2
Q ss_pred -----CCcEEEEECC-CcEEEEe-cCC--cEEEeec----------cCCccc---cccceeEEcCC----C-cEEEEeCC
Q 017317 127 -----ENEILVCDAD-KGLLKVT-EEG--VTVLASH----------VNGSRI---NLADDLIAATD----G-SIYFSVAS 179 (373)
Q Consensus 127 -----~g~L~va~~~-~gl~~~~-~~g--~~~l~~~----------~~~~~~---~~~~~l~~~~d----G-~l~v~~~~ 179 (373)
++..||+|.. .||+.+| .+| .+++... ..|..+ ..+.+|+.+++ + .||+.-.+
T Consensus 165 ~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pls 244 (381)
T 3q6k_A 165 KGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGS 244 (381)
T ss_dssp TTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESS
T ss_pred CCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECC
Confidence 3568999864 6899999 777 4544211 122222 35678888886 4 68998654
Q ss_pred ccccccccccccccccCCceEEEEeCC-------CCeEEEeecCCCCcc--eEEEc-cCCCEEEEEeCCCCeEEEEEecC
Q 017317 180 TKFGLHNWGLDLLEAKPHGKLLKYDPS-------LNETSILLDSLFFAN--GVALS-KDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~g~l~~~d~~-------~~~~~~~~~~~~~~~--gi~~~-~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
+..+|++..+ ...++.+........ +++++ .+|. ||+++...+.|.+++.++
T Consensus 245 -----------------s~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~-ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 245 -----------------AIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKV-IFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp -----------------CSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCE-EEEEESSSSEEEEEETTS
T ss_pred -----------------CCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCe-EEEEeccCCeEEEEeCCC
Confidence 1356666421 133444444332334 56676 5664 999999999999999665
Q ss_pred -C-CCcceeEEec-CCCCCCCceeECCCCCEEEEEec
Q 017317 250 -E-SKEQTEIFVE-NLPGGPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 250 -~-~~~~~~~~~~-~~~g~p~~i~~d~dG~lwva~~~ 283 (373)
+ +......+.. ..-..|+++.+|.+|.||+.++.
T Consensus 307 ~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 307 MPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp CSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred CccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 2 1133444443 23347999999999999999865
No 191
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.43 E-value=0.00063 Score=68.10 Aligned_cols=184 Identities=13% Similarity=0.106 Sum_probs=112.1
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEE-cCCce-EEeeeecCccccCeEECCCCcEE-EEECCCcEEEEec-CC-cEEE
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTW-ENWKLIGGDTLLGITTTQENEIL-VCDADKGLLKVTE-EG-VTVL 150 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~-~~~~~~~~~p~~gl~~d~~g~L~-va~~~~gl~~~~~-~g-~~~l 150 (373)
....++++.++|.+. +++.+|.|..++ .+++. ..+........ +++++++|+.+ .+...+.|..++. .. ...+
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL-SVAFSLDNRQIVSASRDRTIKLWNTLGECKYTI 509 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEECCCCcceee
Confidence 445678899988766 677899999999 45543 23333334456 89999998654 4555555666663 33 2222
Q ss_pred eeccCCccccccceeEEcCCC--cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcceEEEcc
Q 017317 151 ASHVNGSRINLADDLIAATDG--SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVALSK 227 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG--~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~gi~~~~ 227 (373)
.....+ ....+..+++.+++ .+.++.+ ..+.|..+|..+++......+ ......+++++
T Consensus 510 ~~~~~~-h~~~v~~~~~~~~~~~~~l~s~s-----------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~sp 571 (694)
T 3dm0_A 510 SEGGEG-HRDWVSCVRFSPNTLQPTIVSAS-----------------WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSP 571 (694)
T ss_dssp CSSTTS-CSSCEEEEEECSCSSSCEEEEEE-----------------TTSCEEEEETTTCCEEEEECCCSSCEEEEEECT
T ss_pred ccCCCC-CCCcEEEEEEeCCCCcceEEEEe-----------------CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeC
Confidence 221111 12346788999886 3444433 246788888877665544333 33457899999
Q ss_pred CCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 228 DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 228 dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
+++ ++++...++.|..+++...+ ....-........++++++|.+.++....
T Consensus 572 dg~-~l~sg~~Dg~i~iwd~~~~~----~~~~~~~~~~v~~~~~sp~~~~l~~~~~~ 623 (694)
T 3dm0_A 572 DGS-LCASGGKDGVVLLWDLAEGK----KLYSLEANSVIHALCFSPNRYWLCAATEH 623 (694)
T ss_dssp TSS-EEEEEETTSBCEEEETTTTE----EEECCBCSSCEEEEEECSSSSEEEEEETT
T ss_pred CCC-EEEEEeCCCeEEEEECCCCc----eEEEecCCCcEEEEEEcCCCcEEEEEcCC
Confidence 998 45555566788888865431 11111122345668888998877766543
No 192
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.41 E-value=0.00021 Score=65.02 Aligned_cols=185 Identities=10% Similarity=-0.043 Sum_probs=109.9
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEE-cCCceEEe---eeecCccccCeEECCCCcEE-EEECCCcEEEEe-cCC--c
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENW---KLIGGDTLLGITTTQENEIL-VCDADKGLLKVT-EEG--V 147 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~~~---~~~~~~p~~gl~~d~~g~L~-va~~~~gl~~~~-~~g--~ 147 (373)
....++++.++|.++ +++.+|.|..++ .+++.... ........ .+++.++++++ ++...+.+..++ ..+ .
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR-CVRWAPNEKKFAVGSGSRVISICYFEQENDW 131 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEE-EEEECTTSSEEEEEETTSSEEEEEEETTTTE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCcee-EEEECCCCCEEEEEeCCCEEEEEEecCCCcc
Confidence 446778999888765 677889999998 45543222 12233455 88999988754 455545566666 443 2
Q ss_pred EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCC------------------CCe
Q 017317 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS------------------LNE 209 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~------------------~~~ 209 (373)
..... ........+..+++.++|.++++.+. .+.|..+|.. .++
T Consensus 132 ~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 193 (372)
T 1k8k_C 132 WVCKH-IKKPIRSTVLSLDWHPNSVLLAAGSC-----------------DFKCRIFSAYIKEVEERPAPTPWGSKMPFGE 193 (372)
T ss_dssp EEEEE-ECTTCCSCEEEEEECTTSSEEEEEET-----------------TSCEEEEECCCTTTSCCCCCBTTBSCCCTTC
T ss_pred eeeee-eecccCCCeeEEEEcCCCCEEEEEcC-----------------CCCEEEEEcccccccccccccccccccchhh
Confidence 22211 11111235788999999976665432 3667777732 233
Q ss_pred EE-EeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 210 TS-ILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 210 ~~-~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
.. .+.........++++++++.++.+. .++.|..|++...+ ....+. ........++++++|++.++...+
T Consensus 194 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~d~~i~i~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~d~ 265 (372)
T 1k8k_C 194 LMFESSSSCGWVHGVCFSANGSRVAWVS-HDSTVCLADADKKM--AVATLA-SETLPLLAVTFITESSLVAAGHDC 265 (372)
T ss_dssp EEEECCCCSSCEEEEEECSSSSEEEEEE-TTTEEEEEEGGGTT--EEEEEE-CSSCCEEEEEEEETTEEEEEETTS
T ss_pred heEecCCCCCeEEEEEECCCCCEEEEEe-CCCEEEEEECCCCc--eeEEEc-cCCCCeEEEEEecCCCEEEEEeCC
Confidence 32 2222233457899999998665554 56789999876432 122222 112234567888888876666444
No 193
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.41 E-value=4.8e-05 Score=70.81 Aligned_cols=148 Identities=9% Similarity=0.020 Sum_probs=89.9
Q ss_pred cceEEEecCCC-EEEEecCCeEEEEEcC-CceEEeeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC-cEEEeec
Q 017317 79 PEDVCVDRNGV-LYTATRDGWIKRLHKN-GTWENWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG-VTVLASH 153 (373)
Q Consensus 79 P~~ia~d~~G~-l~v~~~~g~I~~~~~~-g~~~~~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g-~~~l~~~ 153 (373)
..+++++++|. |+++..+|.|..++.. ++...... ........++.++|++++ +...+.+..++ .++ ......
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~- 136 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLK-RADYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ- 136 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSC-SCCEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT-
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEe-cCCceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc-
Confidence 45788888554 6688889999999833 22111111 112221335677887554 45545577777 555 322211
Q ss_pred cCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE-eecCCCCcceEEEccCCCEE
Q 017317 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI-LLDSLFFANGVALSKDEDYL 232 (373)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~-~~~~~~~~~gi~~~~dg~~l 232 (373)
+ ....+.++++.++|.+.++.+. .+.|..+|..+++... +.........++++++++.+
T Consensus 137 --~-h~~~v~~~~~~~~~~~l~s~s~-----------------d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 196 (420)
T 3vl1_A 137 --A-HVSEITKLKFFPSGEALISSSQ-----------------DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNV 196 (420)
T ss_dssp --S-SSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEE
T ss_pred --c-ccCccEEEEECCCCCEEEEEeC-----------------CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEE
Confidence 1 1235788999999986665432 4788888887665433 32233445789999999955
Q ss_pred EEEeCCCCeEEEEEecC
Q 017317 233 VVCETFKFRCLKYWLKG 249 (373)
Q Consensus 233 ~v~~~~~~~i~~~~~~~ 249 (373)
+.+ ..++.|..|++..
T Consensus 197 ~s~-~~d~~v~iwd~~~ 212 (420)
T 3vl1_A 197 LSA-SLDGTIRLWECGT 212 (420)
T ss_dssp EEE-ETTSCEEEEETTT
T ss_pred EEE-cCCCcEEEeECCC
Confidence 544 4566788888653
No 194
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.41 E-value=1.1e-05 Score=81.00 Aligned_cols=136 Identities=7% Similarity=-0.071 Sum_probs=84.6
Q ss_pred cceEEEecCCCEEEEecCCeEEEEE-cCCceEEeeeecC----ccccCeEECCCCcEE-EEECC---------CcEEEEe
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGG----DTLLGITTTQENEIL-VCDAD---------KGLLKVT 143 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~----~p~~gl~~d~~g~L~-va~~~---------~gl~~~~ 143 (373)
+.++++.++|.+++.+.+|.|+.++ .+|+......... ... ++++++||+.. .+... ..++.++
T Consensus 19 ~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~-~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d 97 (723)
T 1xfd_A 19 DPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAI-RYEISPDREYALFSYNVEPIYQHSYTGYYVLSK 97 (723)
T ss_dssp CCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCS-EEEECTTSSEEEEEESCCCCSSSCCCSEEEEEE
T ss_pred ccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccc-eEEECCCCCEEEEEecCccceeecceeeEEEEE
Confidence 5667777888865556778899888 4555444333222 255 78999999844 34321 3466777
Q ss_pred -cCC-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCC--
Q 017317 144 -EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLF-- 218 (373)
Q Consensus 144 -~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~-- 218 (373)
.++ .+.+... .+ ....+..++++|||+ |.++. .+.|+.+|.++++...+.....
T Consensus 98 ~~~~~~~~l~~~-~~-~~~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~g~~~~~~~~~~~~ 156 (723)
T 1xfd_A 98 IPHGDPQSLDPP-EV-SNAKLQYAGWGPKGQQLIFIF-------------------ENNIYYCAHVGKQAIRVVSTGKEG 156 (723)
T ss_dssp SSSCCCEECCCT-TC-CSCCCSBCCBCSSTTCEEEEE-------------------TTEEEEESSSSSCCEEEECCCBTT
T ss_pred CCCCceEeccCC-cc-ccccccccEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEecCCCCC
Confidence 566 5444321 11 112356789999995 54442 1479999988776555433211
Q ss_pred -----------------CcceEEEccCCCEEEEEe
Q 017317 219 -----------------FANGVALSKDEDYLVVCE 236 (373)
Q Consensus 219 -----------------~~~gi~~~~dg~~l~v~~ 236 (373)
...+++|+|||+.|+++.
T Consensus 157 ~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 157 VIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp TEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred ceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 125799999999888765
No 195
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.40 E-value=9.1e-05 Score=66.69 Aligned_cols=180 Identities=13% Similarity=0.018 Sum_probs=104.8
Q ss_pred CCcceEEEecCCCE-EEEecCCeEEEEE-cCCc----eEEeeeecCccccCeEECCCCc--EEEEECCCcEEEEec-CC-
Q 017317 77 NGPEDVCVDRNGVL-YTATRDGWIKRLH-KNGT----WENWKLIGGDTLLGITTTQENE--ILVCDADKGLLKVTE-EG- 146 (373)
Q Consensus 77 ~~P~~ia~d~~G~l-~v~~~~g~I~~~~-~~g~----~~~~~~~~~~p~~gl~~d~~g~--L~va~~~~gl~~~~~-~g- 146 (373)
....++++.++|.+ ++++.+|.|..++ ..++ ............ .+++.++++ |+++...+.|..++- ..
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL-CCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEE-EEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceE-EEEECCCCCcEEEEEcCCCeEEEEEeccCC
Confidence 44677888887765 4777899998888 4444 333333334556 889998888 555565555777764 44
Q ss_pred -cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCC---------CeEEEeecC
Q 017317 147 -VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL---------NETSILLDS 216 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~---------~~~~~~~~~ 216 (373)
...+... .....+..+++.+ +.++++.+. .+.|..+|..+ ++.......
T Consensus 91 ~~~~~~~~---~~~~~v~~l~~~~-~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 91 SFQALTNN---EANLGICRICKYG-DDKLIAASW-----------------DGLIEVIDPRNYGDGVIAVKNLNSNNTKV 149 (342)
T ss_dssp SEEECBSC---CCCSCEEEEEEET-TTEEEEEET-----------------TSEEEEECHHHHTTBCEEEEESCSSSSSS
T ss_pred ceEecccc---CCCCceEEEEeCC-CCEEEEEcC-----------------CCeEEEEcccccccccccccCCeeeEEee
Confidence 3222110 0123567889998 766655432 36777777543 221111112
Q ss_pred CCCcceEEEccCCCEEEEEeCCCCeEEEEEecC-CCCcceeEEecCCCCCCCceeECC-CCCEEEEEe
Q 017317 217 LFFANGVALSKDEDYLVVCETFKFRCLKYWLKG-ESKEQTEIFVENLPGGPDNIKLAP-DGSFWIAIL 282 (373)
Q Consensus 217 ~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~g~p~~i~~d~-dG~lwva~~ 282 (373)
......+++++++ ++++ +.++.|..|++.. ..... ..........+..+++.+ +|+++++..
T Consensus 150 ~~~v~~~~~~~~~--l~~~-~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 150 KNKIFTMDTNSSR--LIVG-MNNSQVQWFRLPLCEDDNG-TIEESGLKYQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp CCCEEEEEECSSE--EEEE-ESTTEEEEEESSCCTTCCC-EEEECSCSSCEEEEEECSGGGCEEEEEE
T ss_pred CCceEEEEecCCc--EEEE-eCCCeEEEEECCccccccc-eeeecCCCCceeEEEECCCCCCEEEEEe
Confidence 2334678888876 5555 4567899999765 32211 112212233456788888 887655544
No 196
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.39 E-value=0.00045 Score=67.44 Aligned_cols=230 Identities=11% Similarity=0.097 Sum_probs=134.5
Q ss_pred cceEEEec--CCCEE-EEecCCeEEEEEc-CC--------ceE-EeeeecCccccCeEECCCCcEEEEECCC----c-EE
Q 017317 79 PEDVCVDR--NGVLY-TATRDGWIKRLHK-NG--------TWE-NWKLIGGDTLLGITTTQENEILVCDADK----G-LL 140 (373)
Q Consensus 79 P~~ia~d~--~G~l~-v~~~~g~I~~~~~-~g--------~~~-~~~~~~~~p~~gl~~d~~g~L~va~~~~----g-l~ 140 (373)
..++++.+ +|.+. +++.+|.|..++. ++ +.. .+........ .+++.++|+.+++.... + ++
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~~~~~~~~v~ 145 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS-DISWDFEGRRLCVVGEGRDNFGVFI 145 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEECCSSCSEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEE-EEEEeCCCCEEEEeccCCCCccEEE
Confidence 67899999 88766 6778899988884 33 211 2222234455 89999999765543222 2 33
Q ss_pred EEecCC--cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCC
Q 017317 141 KVTEEG--VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL 217 (373)
Q Consensus 141 ~~~~~g--~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~ 217 (373)
.++ .+ ...+. + ....+..+++.++|. +.++.+ ..+.|..+|..+++........
T Consensus 146 ~~d-~~~~~~~~~----~-~~~~v~~~~~~~~~~~~l~~~~-----------------~d~~v~vwd~~~~~~~~~~~~~ 202 (615)
T 1pgu_A 146 SWD-SGNSLGEVS----G-HSQRINACHLKQSRPMRSMTVG-----------------DDGSVVFYQGPPFKFSASDRTH 202 (615)
T ss_dssp ETT-TCCEEEECC----S-CSSCEEEEEECSSSSCEEEEEE-----------------TTTEEEEEETTTBEEEEEECSS
T ss_pred EEE-CCCcceeee----c-CCccEEEEEECCCCCcEEEEEe-----------------CCCcEEEEeCCCcceeeeeccc
Confidence 333 33 22221 1 123577899999996 555433 2478888998776655444332
Q ss_pred C----CcceEEEccC-CCEEEEEeCCCCeEEEEEecCCCCcceeEEec---CCCCCCCceeECCCCCEEEEEecCCCchh
Q 017317 218 F----FANGVALSKD-EDYLVVCETFKFRCLKYWLKGESKEQTEIFVE---NLPGGPDNIKLAPDGSFWIAILQLSSPGL 289 (373)
Q Consensus 218 ~----~~~gi~~~~d-g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~g~p~~i~~d~dG~lwva~~~~~~~~~ 289 (373)
. ....++++++ ++.++.+. .++.|..|++...+ ....+.. ...+....+++. +|++.++....
T Consensus 203 ~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~~--~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d----- 273 (615)
T 1pgu_A 203 HKQGSFVRDVEFSPDSGEFVITVG-SDRKISCFDGKSGE--FLKYIEDDQEPVQGGIFALSWL-DSQKFATVGAD----- 273 (615)
T ss_dssp SCTTCCEEEEEECSTTCCEEEEEE-TTCCEEEEETTTCC--EEEECCBTTBCCCSCEEEEEES-SSSEEEEEETT-----
T ss_pred CCCCceEEEEEECCCCCCEEEEEe-CCCeEEEEECCCCC--EeEEecccccccCCceEEEEEc-CCCEEEEEcCC-----
Confidence 2 3568999999 88555554 46678888875432 1122211 122344567788 88766655432
Q ss_pred hhccCChHHHHHHHhcchhhhhccCCCccEEEEEECC-CCcEEEEEeCCCCceecceeEEEE-eCCEEEEeeCCCCeEEE
Q 017317 290 EFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAA-NGIVIRKFEDPNGKVMSFVTSALE-FDDHLYLGSLNTNFIGK 367 (373)
Q Consensus 290 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~vgs~~~~~i~~ 367 (373)
+.+..++. +++.+..+..........+..+.. .++.|..++.. ..|..
T Consensus 274 -----------------------------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~i~~ 323 (615)
T 1pgu_A 274 -----------------------------ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLD-GTLNF 323 (615)
T ss_dssp -----------------------------SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETT-SCEEE
T ss_pred -----------------------------CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECC-CCEEE
Confidence 23566664 477777776543222233444444 45677777754 34666
Q ss_pred eeCC
Q 017317 368 LPLK 371 (373)
Q Consensus 368 ~~l~ 371 (373)
+++.
T Consensus 324 ~d~~ 327 (615)
T 1pgu_A 324 YELG 327 (615)
T ss_dssp EETT
T ss_pred EECC
Confidence 6654
No 197
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.39 E-value=0.00039 Score=64.58 Aligned_cols=181 Identities=8% Similarity=-0.024 Sum_probs=112.9
Q ss_pred cceEEEecCCCEEEEecCCeEEEEEcC--Cc-eEEeeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC--cEEEe
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLHKN--GT-WENWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG--VTVLA 151 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~~~--g~-~~~~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g--~~~l~ 151 (373)
..+++++ +..+++++.+|.|..++.. +. ...+....+... ++++.++|++++ +...+.+..++ .++ ...+.
T Consensus 179 v~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~ 256 (401)
T 4aez_A 179 VGCLSWN-RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVC-GLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT 256 (401)
T ss_dssp EEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTCSSEEEEEC
T ss_pred eEEEEEC-CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCee-EEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEec
Confidence 3445564 3455578889999999833 22 233333344556 899999887554 45555677777 555 22221
Q ss_pred eccCCccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCC
Q 017317 152 SHVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDED 230 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~ 230 (373)
. ....+.++++.++| .++++.++ ...+.|..+|..+++.............++++++++
T Consensus 257 ~-----~~~~v~~~~~~p~~~~ll~~~~g---------------s~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 257 N-----HNAAVKAVAWCPWQSNLLATGGG---------------TMDKQIHFWNAATGARVNTVDAGSQVTSLIWSPHSK 316 (401)
T ss_dssp C-----CSSCCCEEEECTTSTTEEEEECC---------------TTTCEEEEEETTTCCEEEEEECSSCEEEEEECSSSS
T ss_pred C-----CcceEEEEEECCCCCCEEEEecC---------------CCCCEEEEEECCCCCEEEEEeCCCcEEEEEECCCCC
Confidence 1 12356789999987 56665431 124789999988776555444445568899999999
Q ss_pred EEEEEe-CCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 231 YLVVCE-TFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 231 ~l~v~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
.++++. ..++.|..|++..........+. ...+....++++++|.+.++..
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~-~h~~~v~~~~~s~dg~~l~s~~ 368 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIP-AHDTRVLYSALSPDGRILSTAA 368 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEE-CCSSCCCEEEECTTSSEEEEEC
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEec-CCCCCEEEEEECCCCCEEEEEe
Confidence 777764 35678888887653222221121 2234566788999998665543
No 198
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.39 E-value=5.7e-06 Score=76.06 Aligned_cols=149 Identities=5% Similarity=-0.041 Sum_probs=85.2
Q ss_pred cceEEEecCCCEE-EEecCCeEEEEE-cCCceEE---eeeecCccccCeEECCCCcEE-EEECCCcEEEEe-cCCc--EE
Q 017317 79 PEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWEN---WKLIGGDTLLGITTTQENEIL-VCDADKGLLKVT-EEGV--TV 149 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~~---~~~~~~~p~~gl~~d~~g~L~-va~~~~gl~~~~-~~g~--~~ 149 (373)
-.++++.++|.+. +++.++.|..++ .++..+. +....+... .+++.++|+++ .+...+.+..++ .++. ..
T Consensus 14 v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~ 92 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVT-CVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQ 92 (377)
T ss_dssp CSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEE-EEEECTTTCCEEEEETTSSEEEC------CCCC
T ss_pred EEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEE-EEEEeCCCCEEEEEeCCCeEEEEEcCCCCceee
Confidence 4678899988866 455788888888 3442222 222233455 88999988644 455545566666 4332 11
Q ss_pred EeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe----EEEeec-CCCCcceEE
Q 017317 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE----TSILLD-SLFFANGVA 224 (373)
Q Consensus 150 l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~----~~~~~~-~~~~~~gi~ 224 (373)
... ..+ ....+..+++.++|++.++.+. .+.|..+|.++++ ...+.. .......++
T Consensus 93 ~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~ 153 (377)
T 3dwl_C 93 TLV-LLR-LNRAATFVRWSPNEDKFAVGSG-----------------ARVISVCYFEQENDWWVSKHLKRPLRSTILSLD 153 (377)
T ss_dssp EEE-CCC-CSSCEEEEECCTTSSCCEEEES-----------------SSCEEECCC-----CCCCEEECSSCCSCEEEEE
T ss_pred eeE-ecc-cCCceEEEEECCCCCEEEEEec-----------------CCeEEEEEECCcccceeeeEeecccCCCeEEEE
Confidence 111 111 1235678899999975554332 3667777776554 233332 234457899
Q ss_pred EccCCCEEEEEeCCCCeEEEEEec
Q 017317 225 LSKDEDYLVVCETFKFRCLKYWLK 248 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~~i~~~~~~ 248 (373)
++++++.++.+ ..++.|..|++.
T Consensus 154 ~~~~~~~l~~~-~~d~~i~iwd~~ 176 (377)
T 3dwl_C 154 WHPNNVLLAAG-CADRKAYVLSAY 176 (377)
T ss_dssp ECTTSSEEEEE-ESSSCEEEEEEC
T ss_pred EcCCCCEEEEE-eCCCEEEEEEEE
Confidence 99999855554 456678888874
No 199
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.39 E-value=1.2e-05 Score=85.97 Aligned_cols=182 Identities=11% Similarity=0.050 Sum_probs=113.0
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC--cEEEe
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLA 151 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g--~~~l~ 151 (373)
....++++.++|... +++.+|.|..++ .+++............ .+++.+++.++.+...+.+..++ .++ ...+.
T Consensus 1004 ~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~-~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~ 1082 (1249)
T 3sfz_A 1004 KAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVK-DFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFT 1082 (1249)
T ss_dssp SCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEE-EEEECSSSEEEEEESSSEEEEEETTTTCCCEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEE-EEEEcCCCcEEEEECCCcEEEEECCCCceeEEEc
Confidence 445678999887654 677889999999 4554443333334455 78888888888887766677788 666 34332
Q ss_pred eccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcceEEEccCCC
Q 017317 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVALSKDED 230 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~gi~~~~dg~ 230 (373)
.. ...+.++++.++|...++.+. .+.|..+|..+++......+ ......++|++|++
T Consensus 1083 ~~-----~~~v~~~~~s~d~~~l~s~s~-----------------d~~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~ 1140 (1249)
T 3sfz_A 1083 CH-----QGTVLSCAISSDATKFSSTSA-----------------DKTAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGI 1140 (1249)
T ss_dssp CC-----SSCCCCEEECSSSSSCEEECC-----------------SSCCCEECSSSSSCSBCCCCCSSCEEEEEECSSSS
T ss_pred cc-----CCcEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCcceeeeeccCCCcEEEEEECCCCC
Confidence 21 124678999999976665432 35677777665543222222 22346789999999
Q ss_pred EEEEEeCCCCeEEEEEecCCCC-cceeEE-----ecCCCCCCCceeECCCCCEEEEEe
Q 017317 231 YLVVCETFKFRCLKYWLKGESK-EQTEIF-----VENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~~~~-~~~~~~-----~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
.+..+. .++.|..|++..... ...... .....+....+++++||.+.++..
T Consensus 1141 ~lat~~-~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l~s~~ 1197 (1249)
T 3sfz_A 1141 LLATGD-DNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTLVSAG 1197 (1249)
T ss_dssp EEEEEE-TTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCEEEES
T ss_pred EEEEEe-CCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEEEECC
Confidence 555554 566788888764322 111000 011223467789999998766553
No 200
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.38 E-value=0.0005 Score=60.73 Aligned_cols=229 Identities=13% Similarity=0.046 Sum_probs=124.4
Q ss_pred CCcCCcceEEEecCC-CEEEEecCCeEEEEE-cCCceEE-eeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC--
Q 017317 74 GILNGPEDVCVDRNG-VLYTATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG-- 146 (373)
Q Consensus 74 g~~~~P~~ia~d~~G-~l~v~~~~g~I~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g-- 146 (373)
+.-....++++ ++| .|.+++.+|.|..++ .+++... +........ .+++.+++++++ +...+.+..++ .+.
T Consensus 16 ~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 16 GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLN-SVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEE-EEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEE-EEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 33345667788 544 566788999999999 4444332 222334456 899999997555 45444455555 222
Q ss_pred cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEc
Q 017317 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALS 226 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~ 226 (373)
.+.+.. ..+ ....+..+.+ ++.+.++.+ ..+.|..+|.. .....+.........+++.
T Consensus 94 ~~~~~~-~~~-~~~~i~~~~~--~~~~l~~~~-----------------~d~~i~~~d~~-~~~~~~~~~~~~v~~~~~~ 151 (313)
T 3odt_A 94 EDPLYT-LIG-HQGNVCSLSF--QDGVVISGS-----------------WDKTAKVWKEG-SLVYNLQAHNASVWDAKVV 151 (313)
T ss_dssp SCC-CE-ECC-CSSCEEEEEE--ETTEEEEEE-----------------TTSEEEEEETT-EEEEEEECCSSCEEEEEEE
T ss_pred CCcccc-hhh-cccCEEEEEe--cCCEEEEEe-----------------CCCCEEEEcCC-cEEEecccCCCceeEEEEc
Confidence 111111 111 1124566777 454444432 24778888832 2233333333444567777
Q ss_pred c-CCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhc
Q 017317 227 K-DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAF 305 (373)
Q Consensus 227 ~-dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~ 305 (373)
+ +++.++.+ ..++.|..|+.. .....+..........+++.++|.+.++...+
T Consensus 152 ~~~~~~l~~~-~~d~~i~i~d~~----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg--------------------- 205 (313)
T 3odt_A 152 SFSENKFLTA-SADKTIKLWQND----KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDG--------------------- 205 (313)
T ss_dssp ETTTTEEEEE-ETTSCEEEEETT----EEEEEECSSCSSCEEEEEEEETTEEEEEETTS---------------------
T ss_pred cCCCCEEEEE-ECCCCEEEEecC----ceEEEEeccCcccEEEEEEcCCCeEEEccCCC---------------------
Confidence 7 77755555 456678888721 11222222133445667888888866655544
Q ss_pred chhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeEEEeeCC
Q 017317 306 PKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 306 ~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~ 371 (373)
.+..+| .+++.+..+....+ .++.+... +++|..++. ...|..+++.
T Consensus 206 --------------~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~l~~~~~-dg~v~iwd~~ 254 (313)
T 3odt_A 206 --------------LIKLVDMHTGDVLRTYEGHES----FVYCIKLLPNGDIVSCGE-DRTVRIWSKE 254 (313)
T ss_dssp --------------EEEEEETTTCCEEEEEECCSS----CEEEEEECTTSCEEEEET-TSEEEEECTT
T ss_pred --------------eEEEEECCchhhhhhhhcCCc----eEEEEEEecCCCEEEEec-CCEEEEEECC
Confidence 355566 34666666654332 35666665 345665554 3446665554
No 201
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.38 E-value=9.1e-06 Score=78.65 Aligned_cols=142 Identities=14% Similarity=0.072 Sum_probs=89.8
Q ss_pred eecCccccCeEECCCCc-EEEEECC-CcEEEEe-cCCc-----------EEEeeccCCccccccceeEEcCCCcEEEEeC
Q 017317 113 LIGGDTLLGITTTQENE-ILVCDAD-KGLLKVT-EEGV-----------TVLASHVNGSRINLADDLIAATDGSIYFSVA 178 (373)
Q Consensus 113 ~~~~~p~~gl~~d~~g~-L~va~~~-~gl~~~~-~~g~-----------~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~ 178 (373)
..+..|+ |+.+++||+ +||++.. ..+..++ .+.. .+...... ...|..+++++||++|++..
T Consensus 274 pvg~~Ph-Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v---G~gP~h~aF~~dG~aY~t~~ 349 (595)
T 1fwx_A 274 PIANNPH-GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL---GLGPLHTAFDGRGNAYTSLF 349 (595)
T ss_dssp EEESSCC-CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC---CSCEEEEEECTTSEEEEEET
T ss_pred ecCCCce-EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC---CCCcceEEECCCCeEEEEEe
Confidence 3456799 999999997 6777543 3466666 3210 12222222 24688999999999999864
Q ss_pred CccccccccccccccccCCceEEEEeCCC----------CeEEEeecCCCC------cceEEEccCCCEEEEEeCCC-Ce
Q 017317 179 STKFGLHNWGLDLLEAKPHGKLLKYDPSL----------NETSILLDSLFF------ANGVALSKDEDYLVVCETFK-FR 241 (373)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~~----------~~~~~~~~~~~~------~~gi~~~~dg~~l~v~~~~~-~~ 241 (373)
- .+.|.++|.++ .++....+.... ..|+++++||++||+++... +|
T Consensus 350 l-----------------dsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr 412 (595)
T 1fwx_A 350 L-----------------DSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDR 412 (595)
T ss_dssp T-----------------TTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTS
T ss_pred c-----------------CCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccc
Confidence 2 34666666543 222222222223 36788899999999999876 67
Q ss_pred E-----------EEEEecCCCCcceeEEecCCCCCCCceeECCCCCE
Q 017317 242 C-----------LKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF 277 (373)
Q Consensus 242 i-----------~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~l 277 (373)
+ ..|++++.+........ . ...|..+.+++...|
T Consensus 413 ~~~~gp~~~~~~ql~dis~~~m~lv~d~p-~-~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 413 FLNVGPLKPENDQLIDISGDKMVLVHDGP-T-FAEPHDAIAVHPSIL 457 (595)
T ss_dssp SCCCCSSCCEEEEEEECSSSSCEEEEEEE-E-SSCCCCEEEECTTTT
T ss_pred cccCCCCCCCcceEEEcCCCcEEEEEEEc-C-CCCCCceEEccHHHc
Confidence 7 78888776544332222 1 356888888776544
No 202
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.36 E-value=2.9e-05 Score=73.19 Aligned_cols=184 Identities=11% Similarity=0.037 Sum_probs=109.0
Q ss_pred cceEEEec-CCC-EEEEecCCeEEEEEc-CCceEEeee---ecCccccCeEECC-CCcEEE-EECCCcEEEEe-cCC-cE
Q 017317 79 PEDVCVDR-NGV-LYTATRDGWIKRLHK-NGTWENWKL---IGGDTLLGITTTQ-ENEILV-CDADKGLLKVT-EEG-VT 148 (373)
Q Consensus 79 P~~ia~d~-~G~-l~v~~~~g~I~~~~~-~g~~~~~~~---~~~~p~~gl~~d~-~g~L~v-a~~~~gl~~~~-~~g-~~ 148 (373)
-.+|++.| ++. |.+|+.+|.|..++. .++...... ..+... +|++.+ ++++++ +...+.|..+| +.+ .+
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~-~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSIT-GLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCC-EEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEE-EEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 56789987 555 558889999999983 333222221 223455 899986 566554 44444566677 555 44
Q ss_pred EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccC
Q 017317 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKD 228 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~d 228 (373)
.+..... .......++++++|.+.++.+. .|.|..+|.+++....+.........++|+|+
T Consensus 201 ~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~-----------------dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 201 VFASSDT--INIWFCSLDVSASSRMVVTGDN-----------------VGNVILLNMDGKELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp EEECCSS--CSCCCCCEEEETTTTEEEEECS-----------------SSBEEEEESSSCBCCCSBCCSSCEEEEEECTT
T ss_pred EEeccCC--CCccEEEEEECCCCCEEEEEeC-----------------CCcEeeeccCcceeEEEecccceEEeeeecCC
Confidence 4432211 1124567899999987766432 47788888775544333222334568999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
++.++++...++.|..|++..............-......++++++|++.++..
T Consensus 262 ~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 262 CDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp CSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEE
T ss_pred CceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEc
Confidence 887777766777888888754321111000001112234567888887665543
No 203
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.36 E-value=0.0001 Score=66.69 Aligned_cols=179 Identities=8% Similarity=-0.031 Sum_probs=102.8
Q ss_pred CcceEEEecC----CCEEEEecCCeEEEEE-cCCc--eEEeeeecCccccCe------EECCCCcEEE-EECCCcEEEEe
Q 017317 78 GPEDVCVDRN----GVLYTATRDGWIKRLH-KNGT--WENWKLIGGDTLLGI------TTTQENEILV-CDADKGLLKVT 143 (373)
Q Consensus 78 ~P~~ia~d~~----G~l~v~~~~g~I~~~~-~~g~--~~~~~~~~~~p~~gl------~~d~~g~L~v-a~~~~gl~~~~ 143 (373)
...++++.++ ..|+++..+|.|..++ .+++ ...+........ .+ ++.+++++++ +...+.+..++
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN-AIDGIGGLGIGEGAPEIVTGSRDGTVKVWD 145 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEE-EEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceE-EEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence 3466777776 4566788899999998 3333 333332223334 55 3467776544 45545577777
Q ss_pred -cCC---cEEEeeccCCccccccceeE----EcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec
Q 017317 144 -EEG---VTVLASHVNGSRINLADDLI----AATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD 215 (373)
Q Consensus 144 -~~g---~~~l~~~~~~~~~~~~~~l~----~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~ 215 (373)
.++ ...+.. ..+.....+..++ +.++|++.++... .+.|..+|..+++......
T Consensus 146 ~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~ 207 (357)
T 3i2n_A 146 PRQKDDPVANMEP-VQGENKRDCWTVAFGNAYNQEERVVCAGYD-----------------NGDIKLFDLRNMALRWETN 207 (357)
T ss_dssp TTSCSSCSEEECC-CTTSCCCCEEEEEEECCCC-CCCEEEEEET-----------------TSEEEEEETTTTEEEEEEE
T ss_pred CCCCCCcceeccc-cCCCCCCceEEEEEEeccCCCCCEEEEEcc-----------------CCeEEEEECccCceeeecC
Confidence 443 233321 1222223455666 5678876665432 4789999988877654444
Q ss_pred CCCCcceEEEcc---CCCEEEEEeCCCCeEEEEEecCCCC-cceeEE-ecCCCCCCCceeECCCCC
Q 017317 216 SLFFANGVALSK---DEDYLVVCETFKFRCLKYWLKGESK-EQTEIF-VENLPGGPDNIKLAPDGS 276 (373)
Q Consensus 216 ~~~~~~gi~~~~---dg~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~-~~~~~g~p~~i~~d~dG~ 276 (373)
.......++++| +++.++++ ..++.|..|++..... ...... ..........+++.++|.
T Consensus 208 ~~~~v~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 208 IKNGVCSLEFDRKDISMNKLVAT-SLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR 272 (357)
T ss_dssp CSSCEEEEEESCSSSSCCEEEEE-ESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE
T ss_pred CCCceEEEEcCCCCCCCCEEEEE-CCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC
Confidence 445567899999 88866665 4567888888754321 111110 001223455677888887
No 204
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.36 E-value=0.0013 Score=59.02 Aligned_cols=179 Identities=10% Similarity=0.100 Sum_probs=107.6
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEE-cCCce-EEeeeecCccccCeEECCCCcEEEE-ECCCcEEEEe-cCC-cEEE
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTW-ENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG-VTVL 150 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~-~~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~g-~~~l 150 (373)
..-.++++.++|... .++.++.|..++ .+++. ..+........ .+++++++.++++ ...+.+..++ ... ...+
T Consensus 66 ~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~ 144 (319)
T 3frx_A 66 HIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVM-SVDIDKKASMIISGSRDKTIKVWTIKGQCLATL 144 (319)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSCEEEEEETTSCEEEEETTSCEEEEE
T ss_pred ccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEE
Confidence 345567888888765 677899999999 55543 33333334456 8899999876554 5445566666 433 3333
Q ss_pred eeccCCccccccceeEEcCC------CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcceE
Q 017317 151 ASHVNGSRINLADDLIAATD------GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGV 223 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~d------G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~gi 223 (373)
... ...+..+.+.++ +.+.++.+ ..+.|..+|..+.+......+ ....+.+
T Consensus 145 ~~h-----~~~v~~~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~~wd~~~~~~~~~~~~h~~~v~~~ 202 (319)
T 3frx_A 145 LGH-----NDWVSQVRVVPNEKADDDSVTIISAG-----------------NDKMVKAWNLNQFQIEADFIGHNSNINTL 202 (319)
T ss_dssp CCC-----SSCEEEEEECCC------CCEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCCSCEEEE
T ss_pred ecc-----CCcEEEEEEccCCCCCCCccEEEEEe-----------------CCCEEEEEECCcchhheeecCCCCcEEEE
Confidence 211 123456666653 33444433 246788888876665443332 3345789
Q ss_pred EEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEec
Q 017317 224 ALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 224 ~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~ 283 (373)
+++|+++. +++...++.|..+++...+. ...+. .......+++.++|.+.++...
T Consensus 203 ~~sp~g~~-l~s~~~dg~i~iwd~~~~~~--~~~~~--~~~~v~~~~~sp~~~~la~~~~ 257 (319)
T 3frx_A 203 TASPDGTL-IASAGKDGEIMLWNLAAKKA--MYTLS--AQDEVFSLAFSPNRYWLAAATA 257 (319)
T ss_dssp EECTTSSE-EEEEETTCEEEEEETTTTEE--EEEEE--CCSCEEEEEECSSSSEEEEEET
T ss_pred EEcCCCCE-EEEEeCCCeEEEEECCCCcE--EEEec--CCCcEEEEEEcCCCCEEEEEcC
Confidence 99999994 44445567888888654321 11221 1233556889999987666543
No 205
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.36 E-value=0.00026 Score=64.46 Aligned_cols=182 Identities=9% Similarity=0.076 Sum_probs=105.3
Q ss_pred cceEEEecCCCEE-EEecCCeEEEEEc-CCceE--E-eee-ecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC-cEE
Q 017317 79 PEDVCVDRNGVLY-TATRDGWIKRLHK-NGTWE--N-WKL-IGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG-VTV 149 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~~g~I~~~~~-~g~~~--~-~~~-~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g-~~~ 149 (373)
-..+++.++|.+. ++..++.|..++. .++.. . ... ...... .+++.++|++++ +...+.+..++ ..+ .+.
T Consensus 19 v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~-~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~ 97 (345)
T 3fm0_A 19 CWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVR-KVAWSPCGNYLASASFDATTCIWKKNQDDFEC 97 (345)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEE-EEEECTTSSEEEEEETTSCEEEEEECCC-EEE
T ss_pred EEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEE-EEEECCCCCEEEEEECCCcEEEEEccCCCeEE
Confidence 4578999988766 6778899998883 34322 1 111 123345 899999997655 45445566666 444 333
Q ss_pred EeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe-EE---EeecCCCCcceEEE
Q 017317 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE-TS---ILLDSLFFANGVAL 225 (373)
Q Consensus 150 l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~-~~---~~~~~~~~~~gi~~ 225 (373)
+.. ..+. ...+.++++.|+|++.++.+. .+.|..+|..++. .+ .+.........+++
T Consensus 98 ~~~-~~~h-~~~v~~v~~sp~~~~l~s~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 98 VTT-LEGH-ENEVKSVAWAPSGNLLATCSR-----------------DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp EEE-ECCC-SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEE
T ss_pred EEE-ccCC-CCCceEEEEeCCCCEEEEEEC-----------------CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEE
Confidence 221 1221 235788999999987776543 3556666654332 11 12222233567899
Q ss_pred ccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 226 SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 226 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
+|+++.+..+ ..++.|..|+...........+. .-.+....++++++|++.++..
T Consensus 159 ~p~~~~l~s~-s~d~~i~~w~~~~~~~~~~~~~~-~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 159 HPSQELLASA-SYDDTVKLYREEEDDWVCCATLE-GHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp CSSSSCEEEE-ETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCCEEEEE-eCCCcEEEEEecCCCEEEEEEec-CCCCceEEEEECCCCCEEEEEe
Confidence 9999855444 45667888876543211111111 1123455688899998666543
No 206
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.35 E-value=0.00032 Score=64.11 Aligned_cols=218 Identities=13% Similarity=0.069 Sum_probs=126.8
Q ss_pred cceEEEecCCCEE-EEecCCeEEEEEcC-C-------ceEEeeeecCccccCeEECCCCc-EEEEECCCcEEEEe-cCC-
Q 017317 79 PEDVCVDRNGVLY-TATRDGWIKRLHKN-G-------TWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG- 146 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~~g~I~~~~~~-g-------~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g- 146 (373)
..++++.++|... ++..++.+..++.. + ....+....+... .+++.+++. |..+...+.+..++ .++
T Consensus 109 v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~t~s~D~~v~lwd~~~~~ 187 (354)
T 2pbi_B 109 VMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLS-ACSFTNSDMQILTASGDGTCALWDVESGQ 187 (354)
T ss_dssp CCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEE-EEEEeCCCCEEEEEeCCCcEEEEeCCCCe
Confidence 4568888888776 56678888887621 1 1122222233445 788888886 55556555566777 666
Q ss_pred -cEEEeeccCCccccccceeEEcC--CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcce
Q 017317 147 -VTVLASHVNGSRINLADDLIAAT--DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANG 222 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~--dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~g 222 (373)
...+... ...+..+++.+ +|++.++.+. .+.|..+|..+++....... ....+.
T Consensus 188 ~~~~~~~h-----~~~v~~~~~~~~~~g~~l~sgs~-----------------Dg~v~~wd~~~~~~~~~~~~h~~~v~~ 245 (354)
T 2pbi_B 188 LLQSFHGH-----GADVLCLDLAPSETGNTFVSGGC-----------------DKKAMVWDMRSGQCVQAFETHESDVNS 245 (354)
T ss_dssp EEEEEECC-----SSCEEEEEECCCSSCCEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEEEcCC-----CCCeEEEEEEeCCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEecCCCCCeEE
Confidence 3333211 12345666665 5666655432 47888999887765444333 334578
Q ss_pred EEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCC-CCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHH
Q 017317 223 VALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENL-PGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHL 301 (373)
Q Consensus 223 i~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~ 301 (373)
++++|+++.+ ++...++.|..|++.... ....+.... ......++++++|++.++....
T Consensus 246 v~~~p~~~~l-~s~s~D~~v~lwd~~~~~--~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d----------------- 305 (354)
T 2pbi_B 246 VRYYPSGDAF-ASGSDDATCRLYDLRADR--EVAIYSKESIIFGASSVDFSLSGRLLFAGYND----------------- 305 (354)
T ss_dssp EEECTTSSEE-EEEETTSCEEEEETTTTE--EEEEECCTTCCSCEEEEEECTTSSEEEEEETT-----------------
T ss_pred EEEeCCCCEE-EEEeCCCeEEEEECCCCc--EEEEEcCCCcccceeEEEEeCCCCEEEEEECC-----------------
Confidence 9999999854 444566778888875431 112222111 1123457788999876665432
Q ss_pred HHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEeC-C-EEEEeeC
Q 017317 302 LAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFD-D-HLYLGSL 360 (373)
Q Consensus 302 ~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~-g-~L~vgs~ 360 (373)
+.+..+| .+++.+..+.... ..++.+.+.. + .|..|+.
T Consensus 306 -----------------~~i~vwd~~~~~~~~~l~~h~----~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 306 -----------------YTINVWDVLKGSRVSILFGHE----NRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp -----------------SCEEEEETTTCSEEEEECCCS----SCEEEEEECTTSSCEEEEET
T ss_pred -----------------CcEEEEECCCCceEEEEECCC----CcEEEEEECCCCCEEEEEcC
Confidence 1255666 4677777665433 3577777763 4 4555554
No 207
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.34 E-value=8.6e-05 Score=68.99 Aligned_cols=183 Identities=12% Similarity=0.046 Sum_probs=113.2
Q ss_pred CCcceEEEecCC-C-EEEEecCCeEEEEE-cCCceEEee---eecCccccCeEECCCCcE-EEEECCCcEEEEe-cCC--
Q 017317 77 NGPEDVCVDRNG-V-LYTATRDGWIKRLH-KNGTWENWK---LIGGDTLLGITTTQENEI-LVCDADKGLLKVT-EEG-- 146 (373)
Q Consensus 77 ~~P~~ia~d~~G-~-l~v~~~~g~I~~~~-~~g~~~~~~---~~~~~p~~gl~~d~~g~L-~va~~~~gl~~~~-~~g-- 146 (373)
....++++.++| + |++++.+|.|..++ .+++..... ....... .+++.++|++ +++...+.+..++ .++
T Consensus 132 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 210 (402)
T 2aq5_A 132 KRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIY-SVDWSRDGALICTSCRDKRVRVIEPRKGTV 210 (402)
T ss_dssp SCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEE-EEEECTTSSCEEEEETTSEEEEEETTTTEE
T ss_pred CeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceE-EEEECCCCCEEEEEecCCcEEEEeCCCCce
Confidence 446678898876 4 45778899999999 455433222 1234456 8999999864 4555555577777 566
Q ss_pred cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeE---EEeecCCCCcceE
Q 017317 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET---SILLDSLFFANGV 223 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~---~~~~~~~~~~~gi 223 (373)
...+.. +.....+..+++.++|.++++... ....+.|..+|..+++. ............+
T Consensus 211 ~~~~~~---~~~~~~~~~~~~~~~~~~l~~g~~--------------~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 211 VAEKDR---PHEGTRPVHAVFVSEGKILTTGFS--------------RMSERQVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp EEEEEC---SSCSSSCCEEEECSTTEEEEEEEC--------------TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred eeeecc---CCCCCcceEEEEcCCCcEEEEecc--------------CCCCceEEEEcCccccCCceEEeccCCCceeEE
Confidence 222211 111223678899999987766410 01247888888775432 1112233446788
Q ss_pred EEccCCCEEEEEeCCCCeEEEEEecCCC--CcceeEEecCCCCCCCceeECCCCCEEE
Q 017317 224 ALSKDEDYLVVCETFKFRCLKYWLKGES--KEQTEIFVENLPGGPDNIKLAPDGSFWI 279 (373)
Q Consensus 224 ~~~~dg~~l~v~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~p~~i~~d~dG~lwv 279 (373)
+++++++.++++...++.|..|++.... ......+. ..+...++++.++|.+.+
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~--~~~~v~~~~~sp~~~~~~ 329 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFS--SKESQRGMGYMPKRGLEV 329 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEEC--CSSCCSEEEECCGGGSCG
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccc--cCCcccceEEecccccce
Confidence 9999999888888778889999987543 22222221 224567788887776543
No 208
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.34 E-value=0.001 Score=60.24 Aligned_cols=184 Identities=9% Similarity=0.087 Sum_probs=106.2
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEE-cCCce-EEeeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCCcEEEe
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTW-ENWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEGVTVLA 151 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~-~~~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g~~~l~ 151 (373)
..-.++++.+++.+. .++.++.|..++ .+++. ..+........ ++++.++|+..+ +...+.+..++ ........
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~ 155 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVY-SVAFSPDNRQILSAGAEREIKLWNILGECKFSS 155 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEE-EEEECSSTTEEEEEETTSCEEEEESSSCEEEEC
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEE-EEEECCCCCEEEEEcCCCEEEEEeccCCceeee
Confidence 345678888888765 677899999999 45543 33333334456 899999997554 45555566676 32222111
Q ss_pred eccCCccccccceeEEcCCC----------cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcc
Q 017317 152 SHVNGSRINLADDLIAATDG----------SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFAN 221 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG----------~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~ 221 (373)
.... .....+..+++.+++ .++++.+ ..+.|..+|........+........
T Consensus 156 ~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~h~~~v~ 217 (343)
T 2xzm_R 156 AEKE-NHSDWVSCVRYSPIMKSANKVQPFAPYFASVG-----------------WDGRLKVWNTNFQIRYTFKAHESNVN 217 (343)
T ss_dssp CTTT-SCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE-----------------TTSEEEEEETTTEEEEEEECCSSCEE
T ss_pred eccc-CCCceeeeeeeccccccccccCCCCCEEEEEc-----------------CCCEEEEEcCCCceeEEEcCccccce
Confidence 1111 112345677787776 3444332 24778888854322222322233457
Q ss_pred eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEec
Q 017317 222 GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 222 gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~ 283 (373)
.++|+|+|+.| ++...++.|..|++...... ...+. .......++++++|.+..+...
T Consensus 218 ~~~~s~~g~~l-~sgs~dg~v~iwd~~~~~~~-~~~~~--~~~~v~~v~~sp~~~~la~~~d 275 (343)
T 2xzm_R 218 HLSISPNGKYI-ATGGKDKKLLIWDILNLTYP-QREFD--AGSTINQIAFNPKLQWVAVGTD 275 (343)
T ss_dssp EEEECTTSSEE-EEEETTCEEEEEESSCCSSC-SEEEE--CSSCEEEEEECSSSCEEEEEES
T ss_pred EEEECCCCCEE-EEEcCCCeEEEEECCCCccc-ceeec--CCCcEEEEEECCCCCEEEEECC
Confidence 89999999955 44456678888887332211 11221 1123566888999887655444
No 209
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.33 E-value=0.00039 Score=63.24 Aligned_cols=185 Identities=17% Similarity=0.147 Sum_probs=105.8
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEEcC-CceEE---eeeecCccccCeEECCC--CcEE-EEECCCcEEEEe-cCC-
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKN-GTWEN---WKLIGGDTLLGITTTQE--NEIL-VCDADKGLLKVT-EEG- 146 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~~~-g~~~~---~~~~~~~p~~gl~~d~~--g~L~-va~~~~gl~~~~-~~g- 146 (373)
....++++.++|.+. ++..+|.|..++.+ +.... +....+... .+++.++ ++++ .+...+.+..++ .++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENGR 90 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSCEEEEEEETTE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEE-EEEeCCCCCCCEEEEeccCCEEEEEEcCCCc
Confidence 445778899988765 66788999988832 22222 222223445 8888755 6544 555555577777 555
Q ss_pred cEEEeeccCCccccccceeEEcCC--CcEEEEeCCccccccccccccccccCCceEEEEeCCCCe---EEEeecCCCCcc
Q 017317 147 VTVLASHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE---TSILLDSLFFAN 221 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~d--G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~~~~~~~ 221 (373)
...+... .+ ....+.++++.++ |.+.++.+. .+.|..+|..++. ...+........
T Consensus 91 ~~~~~~~-~~-~~~~v~~~~~~~~~~~~~l~~~~~-----------------d~~i~v~d~~~~~~~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 91 WSQIAVH-AV-HSASVNSVQWAPHEYGPLLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGVN 151 (379)
T ss_dssp EEEEEEE-CC-CSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEECCTTSCCCEEEEECCTTCEE
T ss_pred eeEeeee-cC-CCcceEEEEeCCCCCCCEEEEecC-----------------CCcEEEEecCCCCceeeEEecCCCCceE
Confidence 3333221 11 1235778999998 876655432 4678888876552 222223333456
Q ss_pred eEEEcc-------------CCCEEEEEeCCCCeEEEEEecCCCCcc-eeEEecCCCCCCCceeECCC---CCEEEEEe
Q 017317 222 GVALSK-------------DEDYLVVCETFKFRCLKYWLKGESKEQ-TEIFVENLPGGPDNIKLAPD---GSFWIAIL 282 (373)
Q Consensus 222 gi~~~~-------------dg~~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~g~p~~i~~d~d---G~lwva~~ 282 (373)
.++++| +++.++.+ ..++.|..|++....... .........+....++++++ |++.++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp EEEECCCC----------CTTCEEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEEcCccccccccccCCCCCCEEEEE-eCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 788998 67755544 456688889876433211 11111112234556888888 66555443
No 210
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.32 E-value=0.00065 Score=72.59 Aligned_cols=185 Identities=12% Similarity=0.065 Sum_probs=112.6
Q ss_pred cCCcceEEEecCCCEE-EEecCCeEEEEE-cCCce-EEeeeecCccccCeEECCCCcEEEE-ECCCcEEEEe-cCC--cE
Q 017317 76 LNGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTW-ENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VT 148 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~-~~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~g--~~ 148 (373)
...-.++++.++|.+. +++.+|.|..++ .+++. ..+....+... +++++++|++.++ ...+.+..++ .++ ..
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVL-CCAFSSDDSYIATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 3446678999988766 677889999999 45543 33333334556 8999999976554 4444577777 666 33
Q ss_pred EEeeccCCccccccceeEEcCCC--cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcceEEE
Q 017317 149 VLASHVNGSRINLADDLIAATDG--SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVAL 225 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG--~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~gi~~ 225 (373)
.+.. ....+..+++.+++ .+.++.+ ..+.|..+|..+++......+ ......+++
T Consensus 694 ~~~~-----~~~~v~~~~~~~~~~~~~l~sg~-----------------~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 751 (1249)
T 3sfz_A 694 TYDE-----HSEQVNCCHFTNKSNHLLLATGS-----------------NDFFLKLWDLNQKECRNTMFGHTNSVNHCRF 751 (1249)
T ss_dssp EEEC-----CSSCEEEEEECSSSSCCEEEEEE-----------------TTSCEEEEETTSSSEEEEECCCSSCEEEEEE
T ss_pred EEcC-----CCCcEEEEEEecCCCceEEEEEe-----------------CCCeEEEEECCCcchhheecCCCCCEEEEEE
Confidence 3321 12346788888854 4544433 246788888877765443332 334578999
Q ss_pred ccCCCEEEEEeCCCCeEEEEEecCCCCcceeEE----------ecCCCCCCCceeECCCCCEEEEEecC
Q 017317 226 SKDEDYLVVCETFKFRCLKYWLKGESKEQTEIF----------VENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 226 ~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~----------~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
+|+++.++. .+.++.|..|++........... ..........+++.++|...++...+
T Consensus 752 sp~~~~l~s-~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~ 819 (1249)
T 3sfz_A 752 SPDDELLAS-CSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN 819 (1249)
T ss_dssp CSSTTEEEE-EESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT
T ss_pred ecCCCEEEE-EECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC
Confidence 999995544 45567888888754321110000 00111234567888999877766543
No 211
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.30 E-value=0.0003 Score=71.44 Aligned_cols=179 Identities=11% Similarity=0.014 Sum_probs=108.6
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEE-cCCceE-EeeeecCccccCeEECCCCc-EEEEECCCcEEEEe-cCC--c-E
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG--V-T 148 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g--~-~ 148 (373)
....++++.++|... +++.+|.|..++ .+++.. .+....+... .+++.++|. |.++...+.+..++ .++ . .
T Consensus 56 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 56 TPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ 134 (814)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEE
T ss_pred CcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEE-EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEE
Confidence 345778899987755 777899999999 555543 3332344556 899999996 44555545566677 444 2 2
Q ss_pred EEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE-eecC-CCCcceEEE
Q 017317 149 VLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI-LLDS-LFFANGVAL 225 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~-~~~~-~~~~~gi~~ 225 (373)
.+... ...+..+++.| +|.++++.+. .+.|..+|..+++... +... ......+++
T Consensus 135 ~~~~~-----~~~v~~~~~~p~~~~~l~~~~~-----------------dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~ 192 (814)
T 3mkq_A 135 TFEGH-----EHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTPNFTLTTGQERGVNYVDY 192 (814)
T ss_dssp EEECC-----SSCEEEEEEETTEEEEEEEEET-----------------TSEEEEEETTCSSCSEEEECCCTTCCCEEEE
T ss_pred EEcCC-----CCcEEEEEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCcceeEEecCCCCCEEEEEE
Confidence 22111 13467889998 7766555432 4788888876554322 2222 245678899
Q ss_pred cc--CCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 226 SK--DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 226 ~~--dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
++ +++.++ +...++.|..|+..... ....+. ...+....+++.++|.+.++..
T Consensus 193 ~~~~~~~~l~-~~~~dg~i~~~d~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 193 YPLPDKPYMI-TASDDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGS 247 (814)
T ss_dssp CCSTTCCEEE-EECTTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEE
T ss_pred EECCCCCEEE-EEeCCCEEEEEECCCCc--EEEEEc-CCCCCEEEEEEcCCCCEEEEEe
Confidence 98 888444 44566788888865432 112222 1223345678888987555543
No 212
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.30 E-value=0.0008 Score=63.51 Aligned_cols=173 Identities=10% Similarity=0.039 Sum_probs=97.4
Q ss_pred eEEEecCCCEEEEecCCeEEEEE-cCCceEE-eeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC--cEEEeeccC
Q 017317 81 DVCVDRNGVLYTATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLASHVN 155 (373)
Q Consensus 81 ~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g--~~~l~~~~~ 155 (373)
++..+ ++.|.+++.+|.|..++ .+++... +....+... .+++.+++.|..+...+.+..++ .++ ...+...
T Consensus 127 ~~~~~-~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~-~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h-- 202 (464)
T 3v7d_B 127 CLQFE-DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVW-ALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGH-- 202 (464)
T ss_dssp EEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCC--
T ss_pred EEEEC-CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEE-EEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCC--
Confidence 45554 45666888999999999 5554332 222234455 88888888666777666677788 666 3332211
Q ss_pred CccccccceeEEc--CCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE---------------------
Q 017317 156 GSRINLADDLIAA--TDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI--------------------- 212 (373)
Q Consensus 156 ~~~~~~~~~l~~~--~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~--------------------- 212 (373)
...+..+++. +++.+.++.+. .+.|..+|..+++...
T Consensus 203 ---~~~v~~l~~~~~~~~~~l~s~s~-----------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (464)
T 3v7d_B 203 ---NSTVRCLDIVEYKNIKYIVTGSR-----------------DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYF 262 (464)
T ss_dssp ---SSCEEEEEEEESSSCEEEEEEET-----------------TSCEEEEECCCCCCC------CCSSEEESCGGGCTTE
T ss_pred ---CCccEEEEEecCCCCCEEEEEcC-----------------CCcEEEeeCCCCcccccccccCCcceEeeccCCCeEE
Confidence 1245666666 56665555432 3566666655443110
Q ss_pred --eecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 213 --LLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 213 --~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
... .....-.+++++++.++.+. .++.|..|++...+ ....+. ........++++++|++.++..
T Consensus 263 ~~~~~-~~~~~v~~~~~~~~~l~~~~-~d~~i~vwd~~~~~--~~~~~~-~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 263 VGVLR-GHMASVRTVSGHGNIVVSGS-YDNTLIVWDVAQMK--CLYILS-GHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp EEEEC-CCSSCEEEEEEETTEEEEEE-TTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEEETTTTEEEEEE
T ss_pred EEEcc-CccceEEEEcCCCCEEEEEe-CCCeEEEEECCCCc--EEEEec-CCCCCEEEEEEcCCCCEEEEEe
Confidence 011 11122345678888555554 56678888875321 112221 1223345678889987655543
No 213
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.30 E-value=0.00011 Score=66.01 Aligned_cols=181 Identities=10% Similarity=0.094 Sum_probs=105.0
Q ss_pred CCcceEEEecCCC--EEEEecCCeEEEEEc-CC-ceEEeee--ecCccccCeEECCCCc-EEEEECCCcEEEEe-cC--C
Q 017317 77 NGPEDVCVDRNGV--LYTATRDGWIKRLHK-NG-TWENWKL--IGGDTLLGITTTQENE-ILVCDADKGLLKVT-EE--G 146 (373)
Q Consensus 77 ~~P~~ia~d~~G~--l~v~~~~g~I~~~~~-~g-~~~~~~~--~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~--g 146 (373)
....++++.++|. |++++.+|.|..++. .. +...+.. ...... .+++.+ ++ |+.+...+.+..++ .+ +
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~-~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGIC-RICKYG-DDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEE-EEEEET-TTEEEEEETTSEEEEECHHHHTT
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceE-EEEeCC-CCEEEEEcCCCeEEEEccccccc
Confidence 4567788988887 668888999999985 44 4444433 334455 888888 65 44555555566666 33 1
Q ss_pred -c----EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCC-Ce--EEEee-cCC
Q 017317 147 -V----TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL-NE--TSILL-DSL 217 (373)
Q Consensus 147 -~----~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~~--~~~~~-~~~ 217 (373)
. ........ ....+.++++.+++ ++++.. .+.|..+|..+ +. ..... ...
T Consensus 135 ~~~~~~~~~~~~~~--~~~~v~~~~~~~~~-l~~~~~------------------d~~i~i~d~~~~~~~~~~~~~~~~~ 193 (342)
T 1yfq_A 135 GVIAVKNLNSNNTK--VKNKIFTMDTNSSR-LIVGMN------------------NSQVQWFRLPLCEDDNGTIEESGLK 193 (342)
T ss_dssp BCEEEEESCSSSSS--SCCCEEEEEECSSE-EEEEES------------------TTEEEEEESSCCTTCCCEEEECSCS
T ss_pred ccccccCCeeeEEe--eCCceEEEEecCCc-EEEEeC------------------CCeEEEEECCccccccceeeecCCC
Confidence 1 00000111 12346788888887 666543 36888888775 32 22222 223
Q ss_pred CCcceEEEcc-CCCEEEEEeCCCCeEEEEEecCC--C--CcceeEEecCC--------CCCCCceeECCCCCEEEEE
Q 017317 218 FFANGVALSK-DEDYLVVCETFKFRCLKYWLKGE--S--KEQTEIFVENL--------PGGPDNIKLAPDGSFWIAI 281 (373)
Q Consensus 218 ~~~~gi~~~~-dg~~l~v~~~~~~~i~~~~~~~~--~--~~~~~~~~~~~--------~g~p~~i~~d~dG~lwva~ 281 (373)
.....+++++ +++.++++. .++.+..++++.. . ......+.... .+....++++++|++.++.
T Consensus 194 ~~i~~i~~~~~~~~~l~~~~-~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 194 YQIRDVALLPKEQEGYACSS-IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEE-TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred CceeEEEECCCCCCEEEEEe-cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEe
Confidence 3457899999 998555554 5677888776543 1 11222222111 1134567888988754443
No 214
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.29 E-value=0.00082 Score=59.33 Aligned_cols=224 Identities=13% Similarity=0.071 Sum_probs=131.5
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEEc-CC---c-eEEeeeecCccccCeEECCCCcEEEEECCCcEEEEecCC--cE
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHK-NG---T-WENWKLIGGDTLLGITTTQENEILVCDADKGLLKVTEEG--VT 148 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~~-~g---~-~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~~~g--~~ 148 (373)
....++++.++|.+. ++..+|.|..++. +. + ...+........ .+.++ .+.|+++...+.+..++ .+ ..
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~-~~~l~~~~~d~~i~~~d-~~~~~~ 136 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVC-SLSFQ-DGVVISGSWDKTAKVWK-EGSLVY 136 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEE-EEEEE-TTEEEEEETTSEEEEEE-TTEEEE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEE-EEEec-CCEEEEEeCCCCEEEEc-CCcEEE
Confidence 445678898877765 6778898888872 21 2 222222233445 77774 33455566555555665 33 23
Q ss_pred EEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec-CCCCcceEEEc
Q 017317 149 VLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SLFFANGVALS 226 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~~~~~gi~~~ 226 (373)
.+... ...+..+.+.+ ++...++.+. .+.|..+|.. .....+.. .......++++
T Consensus 137 ~~~~~-----~~~v~~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~ 193 (313)
T 3odt_A 137 NLQAH-----NASVWDAKVVSFSENKFLTASA-----------------DKTIKLWQND-KVIKTFSGIHNDVVRHLAVV 193 (313)
T ss_dssp EEECC-----SSCEEEEEEEETTTTEEEEEET-----------------TSCEEEEETT-EEEEEECSSCSSCEEEEEEE
T ss_pred ecccC-----CCceeEEEEccCCCCEEEEEEC-----------------CCCEEEEecC-ceEEEEeccCcccEEEEEEc
Confidence 22211 12456677766 6765555332 4678888843 22222222 33445789999
Q ss_pred cCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcc
Q 017317 227 KDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFP 306 (373)
Q Consensus 227 ~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~ 306 (373)
+++. ++ +...++.|..|++...+ ....+. ...+....++++++|.+..+...+
T Consensus 194 ~~~~-~~-~~~~dg~i~i~d~~~~~--~~~~~~-~~~~~i~~~~~~~~~~l~~~~~dg---------------------- 246 (313)
T 3odt_A 194 DDGH-FI-SCSNDGLIKLVDMHTGD--VLRTYE-GHESFVYCIKLLPNGDIVSCGEDR---------------------- 246 (313)
T ss_dssp ETTE-EE-EEETTSEEEEEETTTCC--EEEEEE-CCSSCEEEEEECTTSCEEEEETTS----------------------
T ss_pred CCCe-EE-EccCCCeEEEEECCchh--hhhhhh-cCCceEEEEEEecCCCEEEEecCC----------------------
Confidence 9987 44 44456789999875432 122222 223345678899999877666554
Q ss_pred hhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEe-CCEEEEeeCCCCeEEEeeCC
Q 017317 307 KLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEF-DDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 307 ~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~vgs~~~~~i~~~~l~ 371 (373)
.+..+| .+++.+..+..+.+ .+..+... ++++..++. ...|..+++.
T Consensus 247 -------------~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~~-dg~i~iw~~~ 295 (313)
T 3odt_A 247 -------------TVRIWSKENGSLKQVITLPAI----SIWSVDCMSNGDIIVGSS-DNLVRIFSQE 295 (313)
T ss_dssp -------------EEEEECTTTCCEEEEEECSSS----CEEEEEECTTSCEEEEET-TSCEEEEESC
T ss_pred -------------EEEEEECCCCceeEEEeccCc----eEEEEEEccCCCEEEEeC-CCcEEEEeCC
Confidence 467777 56777777765543 46777765 456666665 4457777765
No 215
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.28 E-value=0.00067 Score=61.31 Aligned_cols=150 Identities=11% Similarity=0.032 Sum_probs=89.7
Q ss_pred cceEEEecC----CC-EEEEecCCeEEEEE-cCCceEE-eeeecCccccCeEECC-CCcEEE-EECCCcEEEEe-cCC-c
Q 017317 79 PEDVCVDRN----GV-LYTATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQ-ENEILV-CDADKGLLKVT-EEG-V 147 (373)
Q Consensus 79 P~~ia~d~~----G~-l~v~~~~g~I~~~~-~~g~~~~-~~~~~~~p~~gl~~d~-~g~L~v-a~~~~gl~~~~-~~g-~ 147 (373)
..++++.++ |. |+++..+|.|..++ .+++... +........ .+++.+ ++++++ +...+.|..++ .++ .
T Consensus 72 v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 150 (366)
T 3k26_A 72 FYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAIN-ELKFHPRDPNLLLSVSKDHALRLWNIQTDTL 150 (366)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEE-EEEECSSCTTEEEEEETTSCEEEEETTTTEE
T ss_pred EEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEE-EEEECCCCCCEEEEEeCCCeEEEEEeecCeE
Confidence 566778776 44 45788899999998 4455433 322334456 899998 777554 45555677778 666 2
Q ss_pred EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec------------
Q 017317 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD------------ 215 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~------------ 215 (373)
........+ ....+.++++.++|...++.+. .+.|..+|..+++......
T Consensus 151 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 212 (366)
T 3k26_A 151 VAIFGGVEG-HRDEVLSADYDLLGEKIMSCGM-----------------DHSLKLWRINSKRMMNAIKESYDYNPNKTNR 212 (366)
T ss_dssp EEEECSTTS-CSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESCSHHHHHHHHHHHTCCGGGCSS
T ss_pred EEEeccccc-ccCceeEEEECCCCCEEEEecC-----------------CCCEEEEECCCCccccccceeEEecCCCCcc
Confidence 222111111 1235788999999976665432 3677777776543211000
Q ss_pred -----------------CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCC
Q 017317 216 -----------------SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (373)
Q Consensus 216 -----------------~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~ 250 (373)
.......++++ ++ ++++...++.|..|++...
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~ 261 (366)
T 3k26_A 213 PFISQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKM 261 (366)
T ss_dssp CCCCEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESST
T ss_pred cccceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCc
Confidence 12223567777 55 5555566788999987643
No 216
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.28 E-value=0.00058 Score=63.91 Aligned_cols=186 Identities=10% Similarity=0.108 Sum_probs=106.0
Q ss_pred CcceEEEecCCCEE-EEecCCeEEEEE-cCCc------------eEEeeeec------------CccccCeEECCCC--c
Q 017317 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGT------------WENWKLIG------------GDTLLGITTTQEN--E 129 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~------------~~~~~~~~------------~~p~~gl~~d~~g--~ 129 (373)
...++++.++|.+. +|+.+|.|..++ .+++ ...+.... +... .+++.+++ .
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~-~l~~~~~~~~~ 108 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN-KIRWLPQKNAA 108 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCC-EEEECCCCSSS
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceE-EEEEcCCCCcc
Confidence 35678899988766 677899999998 3332 12222211 3345 88999887 4
Q ss_pred -EEEEECCCcEEEEe-cCC-cEEE-e-----------------------------------eccCCccccccceeEEcCC
Q 017317 130 -ILVCDADKGLLKVT-EEG-VTVL-A-----------------------------------SHVNGSRINLADDLIAATD 170 (373)
Q Consensus 130 -L~va~~~~gl~~~~-~~g-~~~l-~-----------------------------------~~~~~~~~~~~~~l~~~~d 170 (373)
|..+...+.+..++ .++ .... . ..........+.++++.++
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 44555545566565 332 1100 0 0000111235678999999
Q ss_pred CcEEEEeCCccccccccccccccccCCceEEEEeCCC-CeEEEee--------cCCCCcceEEEccCC-CEEEEEeCCCC
Q 017317 171 GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL-NETSILL--------DSLFFANGVALSKDE-DYLVVCETFKF 240 (373)
Q Consensus 171 G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~~~~~~~--------~~~~~~~gi~~~~dg-~~l~v~~~~~~ 240 (373)
|.++++. . .+.|..+|..+ ++..... ........++++|++ + ++++...++
T Consensus 189 ~~~l~s~-~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~s~~~dg 249 (447)
T 3dw8_B 189 YETYLSA-D-----------------DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN-TFVYSSSKG 249 (447)
T ss_dssp SSEEEEE-C-----------------SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT-EEEEEETTS
T ss_pred CCEEEEe-C-----------------CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc-EEEEEeCCC
Confidence 9877764 2 37788888763 2222211 112235679999998 6 555555677
Q ss_pred eEEEEEecCCCCc--ceeEEecCCC-----------CCCCceeECCCCCEEEEEec
Q 017317 241 RCLKYWLKGESKE--QTEIFVENLP-----------GGPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 241 ~i~~~~~~~~~~~--~~~~~~~~~~-----------g~p~~i~~d~dG~lwva~~~ 283 (373)
.|..|++...... ....+..... +....++++++|++.++...
T Consensus 250 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~ 305 (447)
T 3dw8_B 250 TIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY 305 (447)
T ss_dssp CEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES
T ss_pred eEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC
Confidence 8999997654321 1222321111 13456888999987776544
No 217
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.27 E-value=0.0015 Score=58.15 Aligned_cols=231 Identities=10% Similarity=-0.036 Sum_probs=128.6
Q ss_pred cceEEEecCCCEE-EEecCCeEEEEE-cCCce-EEeeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCCcEEEeec
Q 017317 79 PEDVCVDRNGVLY-TATRDGWIKRLH-KNGTW-ENWKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEGVTVLASH 153 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~-~~~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g~~~l~~~ 153 (373)
-.++++.++|++. +++.++.|..++ .+++. ..+........ .+++.+++.+++ +...+.+..++ .++..... .
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~-~ 135 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ-T 135 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEEGGGTTEEEE-E
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEE-EEEEcCCCCEEEEECCCCeEEEEECCCCcchhh-h
Confidence 3567777877655 778899999999 45543 33333344556 899999997655 45445567777 54411111 1
Q ss_pred cCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEE-EeecC-CCCcceEEEcc--C
Q 017317 154 VNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-ILLDS-LFFANGVALSK--D 228 (373)
Q Consensus 154 ~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~~~-~~~~~gi~~~~--d 228 (373)
..+ ....+..+++.| ++.+.++.+. .+.|..+|..++... .+... ....+.+.+++ +
T Consensus 136 ~~~-h~~~v~~v~~~p~~~~~l~sgs~-----------------D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 197 (304)
T 2ynn_A 136 FEG-HEHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPD 197 (304)
T ss_dssp ECC-CCSCEEEEEECTTCTTEEEEEET-----------------TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTT
T ss_pred hcc-cCCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCC
Confidence 111 123577899998 5676666432 467878886544322 12222 12234566665 6
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchh
Q 017317 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKL 308 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 308 (373)
++ ++++...++.|..+++.... ....+. .-......+++.+++.+.++....
T Consensus 198 ~~-~l~s~s~D~~i~iWd~~~~~--~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~D------------------------ 249 (304)
T 2ynn_A 198 KP-YMITASDDLTIKIWDYQTKS--CVATLE-GHMSNVSFAVFHPTLPIIISGSED------------------------ 249 (304)
T ss_dssp CC-EEEEEETTSEEEEEETTTTE--EEEEEE-CCSSCEEEEEECSSSSEEEEEETT------------------------
T ss_pred CC-EEEEEcCCCeEEEEeCCCCc--cceeeC-CCCCCEEEEEECCCCCEEEEEcCC------------------------
Confidence 66 45555567788888865431 112222 111233456788898866654432
Q ss_pred hhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEe-C-CEEEEeeCCCCeEEEeeCC
Q 017317 309 IKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEF-D-DHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 309 ~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~vgs~~~~~i~~~~l~ 371 (373)
+.+..+| ..++....+.... ..+..+... + +..|+.+-..+.+..+.+.
T Consensus 250 ----------g~i~iWd~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 250 ----------GTLKIWNSSTYKVEKTLNVGL----ERSWCIATHPTGRKNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp ----------SCEEEEETTTCCEEEEECCSS----SSEEEEEECTTCGGGCEEEEETTEEEEEECC
T ss_pred ----------CeEEEEECCCCceeeeccCCC----ccEEEEEECCCCCceEEEEecCCceEEEEec
Confidence 1355566 3567777765433 234555543 2 3333434346667776665
No 218
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.26 E-value=6.9e-05 Score=69.82 Aligned_cols=181 Identities=13% Similarity=0.129 Sum_probs=106.4
Q ss_pred CcceEEEec--CCCEEEEecCC----eEEEEEcCC-ceEEeeeec--------------CccccCeEECC---CCcEEEE
Q 017317 78 GPEDVCVDR--NGVLYTATRDG----WIKRLHKNG-TWENWKLIG--------------GDTLLGITTTQ---ENEILVC 133 (373)
Q Consensus 78 ~P~~ia~d~--~G~l~v~~~~g----~I~~~~~~g-~~~~~~~~~--------------~~p~~gl~~d~---~g~L~va 133 (373)
...+|++|+ .+.||+++..| +|++.+..| .++.+.... .... +|++++ .+.||++
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVF-WLTPGHASEPGTWYAG 134 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEE-EEEECCTTSTTCEEEE
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCccccccccccccee-EEEeCCCCCCCEEEEE
Confidence 357899998 89999998777 888876444 344433210 1233 577874 6789998
Q ss_pred ECCCcEEEEecCC--cEEEeecc--C------------CccccccceeEEcC--CCcEEEEeCCcccccccccccccccc
Q 017317 134 DADKGLLKVTEEG--VTVLASHV--N------------GSRINLADDLIAAT--DGSIYFSVASTKFGLHNWGLDLLEAK 195 (373)
Q Consensus 134 ~~~~gl~~~~~~g--~~~l~~~~--~------------~~~~~~~~~l~~~~--dG~l~v~~~~~~~~~~~~~~~~~~~~ 195 (373)
....+|++.+..| .+.+.... + +.....+..|++++ .+.||++...
T Consensus 135 ~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~---------------- 198 (394)
T 3b7f_A 135 TSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS---------------- 198 (394)
T ss_dssp EETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET----------------
T ss_pred ecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC----------------
Confidence 7667888887545 45442210 0 11122356788987 3689998643
Q ss_pred CCceEEEEeCCCCeEEEeecCC-------------CCcceEEEccC-CCEEEEEeCCCCeEEEEEecCCCCcceeEEecC
Q 017317 196 PHGKLLKYDPSLNETSILLDSL-------------FFANGVALSKD-EDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN 261 (373)
Q Consensus 196 ~~g~l~~~d~~~~~~~~~~~~~-------------~~~~gi~~~~d-g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~ 261 (373)
++|++.+..++..+.+.... .....++++++ .+.+|+.. ...|++.+-.+. +.+.+...
T Consensus 199 --ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~--~~gl~~s~D~G~---tW~~~~~~ 271 (394)
T 3b7f_A 199 --GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN--HCGIYRMDRREG---VWKRIGDA 271 (394)
T ss_dssp --BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE--TTEEEEEETTTT---EEECGGGG
T ss_pred --CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc--CCeEEEeCCCCC---cceECCCC
Confidence 57888876655565543221 11345778875 35688875 356888763332 12222111
Q ss_pred CCC----CCCceeEC--CCCCEEEEEe
Q 017317 262 LPG----GPDNIKLA--PDGSFWIAIL 282 (373)
Q Consensus 262 ~~g----~p~~i~~d--~dG~lwva~~ 282 (373)
++. +...+++| ..+.+|+++.
T Consensus 272 l~~~~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 272 MPREVGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp SCTTTCSCEEEEEECSSCTTCEEEEEC
T ss_pred CCCCCccceEEEEECCCCCCEEEEEec
Confidence 221 11236666 4578999974
No 219
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.25 E-value=0.00015 Score=72.04 Aligned_cols=178 Identities=11% Similarity=-0.020 Sum_probs=99.9
Q ss_pred cCCC--EEEEe-cCCeEEEEEcC----CceEEeeee-----cCccccCeEECCCCc-EEEEECC----------CcEEEE
Q 017317 86 RNGV--LYTAT-RDGWIKRLHKN----GTWENWKLI-----GGDTLLGITTTQENE-ILVCDAD----------KGLLKV 142 (373)
Q Consensus 86 ~~G~--l~v~~-~~g~I~~~~~~----g~~~~~~~~-----~~~p~~gl~~d~~g~-L~va~~~----------~gl~~~ 142 (373)
|||+ |++.. .+..|+.++.+ ++...+... ..... ++++++||+ |+.+... ..|+.+
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~-~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~ 166 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWA-DPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAV 166 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEE-EEEEETTTTEEEEEEEEECSSSTTCEEEEEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCcccc-CcEECCCCCEEEEEEecccCCCCCCceeEEEEE
Confidence 6665 34443 46789998865 555544331 23445 788999996 4444322 257778
Q ss_pred e-cC------C-cEEEe-eccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCC-CC---
Q 017317 143 T-EE------G-VTVLA-SHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS-LN--- 208 (373)
Q Consensus 143 ~-~~------g-~~~l~-~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~--- 208 (373)
+ .+ + .+.+. .. ......++++|||+ |+++..... + ..-....|+.+|.+ ++
T Consensus 167 ~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~SpDG~~la~~~~~~~-~---------~~~~~~~i~~~d~~~~g~~~ 231 (662)
T 3azo_A 167 PLDGSAAADRSAVRELSDDA-----HRFVTGPRLSPDGRQAVWLAWDHP-R---------MPWEGTELKTARVTEDGRFA 231 (662)
T ss_dssp ETTSTTTTCGGGSEESSCSC-----SSEECCCEECTTSSEEEEEEECTT-C---------CTTTCEEEEEEEECTTSCEE
T ss_pred ECCCCccccCCceeEEEecC-----CCcccCceECCCCCEEEEEECCCC-C---------CCCCCcEEEEEEECCCCccc
Confidence 8 55 6 55443 21 12455778999995 555542200 0 00012478989887 46
Q ss_pred eEEEeecC-CCCcceEEEccCCCEEEEEeCCCC--eEEEEEecCCCCcceeEEecCCC------CC--CCceeECCCCCE
Q 017317 209 ETSILLDS-LFFANGVALSKDEDYLVVCETFKF--RCLKYWLKGESKEQTEIFVENLP------GG--PDNIKLAPDGSF 277 (373)
Q Consensus 209 ~~~~~~~~-~~~~~gi~~~~dg~~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~------g~--p~~i~~d~dG~l 277 (373)
+.+.+... ......++|+|||+ ++++....+ .|++++.++.+. ........ .. ...+++.++|++
T Consensus 232 ~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~~---~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~ 307 (662)
T 3azo_A 232 DTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGAA---TQLCRREEEFAGPLWTPGMRWFAPLANGLI 307 (662)
T ss_dssp EEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCCE---EESSCCSSBSSCCCCSTTCCSEEECTTSCE
T ss_pred ccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCce---eecccccccccCccccccCceEeEeCCCEE
Confidence 44444443 34567789999999 666554444 788887643321 11111100 01 235677778887
Q ss_pred EEEEec
Q 017317 278 WIAILQ 283 (373)
Q Consensus 278 wva~~~ 283 (373)
++....
T Consensus 308 ~~~~~~ 313 (662)
T 3azo_A 308 AVVHGK 313 (662)
T ss_dssp EEEEBS
T ss_pred EEEEEc
Confidence 766543
No 220
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.23 E-value=0.0025 Score=58.41 Aligned_cols=150 Identities=10% Similarity=-0.025 Sum_probs=89.5
Q ss_pred CCcceEEEec-CCC-EEEEecCCeEEEEE-cCCceEEeeeecCccccCeEECC---CCc-EEEEECCCcEEEEe-cCC--
Q 017317 77 NGPEDVCVDR-NGV-LYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQ---ENE-ILVCDADKGLLKVT-EEG-- 146 (373)
Q Consensus 77 ~~P~~ia~d~-~G~-l~v~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~---~g~-L~va~~~~gl~~~~-~~g-- 146 (373)
....++++.+ ++. +.+++.+|.|..++ ..++............ .+.+.+ ++. ++++...+.+..++ .++
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVY-SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEECSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCcee-eeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 3456788887 554 55777899999999 4444433333334444 666665 333 44555555677787 555
Q ss_pred cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCe--EEEee---------
Q 017317 147 VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE--TSILL--------- 214 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~--~~~~~--------- 214 (373)
...+.. ....+..+++.++|. ++++.+. .|.|..+|..++. ...+.
T Consensus 179 ~~~~~~-----~~~~v~~~~~~~~~~~ll~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 179 SHILQG-----HRQEILAVSWSPRYDYILATASA-----------------DSRVKLWDVRRASGCLITLDQHNGKKSQA 236 (408)
T ss_dssp CEEECC-----CCSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred eeeecC-----CCCcEEEEEECCCCCcEEEEEcC-----------------CCcEEEEECCCCCccccccccccccccee
Confidence 333321 113467899999986 5555332 3677778765443 11110
Q ss_pred ------cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCC
Q 017317 215 ------DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (373)
Q Consensus 215 ------~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~ 250 (373)
........++++++++.++.+. .++.|..|++...
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~vwd~~~~ 277 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGLHLLTVG-TDNRMRLWNSSNG 277 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEETTTC
T ss_pred eccccccccCceeEEEEcCCCCEEEEec-CCCeEEEEECCCC
Confidence 1112245789999999666654 4567889987643
No 221
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.22 E-value=0.0019 Score=63.64 Aligned_cols=179 Identities=13% Similarity=0.131 Sum_probs=106.1
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEEc-CCce--E-EeeeecCccccCeEECCCCcEEEEECCC----c-EEEEecCC
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHK-NGTW--E-NWKLIGGDTLLGITTTQENEILVCDADK----G-LLKVTEEG 146 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~~-~g~~--~-~~~~~~~~p~~gl~~d~~g~L~va~~~~----g-l~~~~~~g 146 (373)
..-.++++.|+|.+. .++.+|.|..++. +++. . .+....+... .++++++|+..++.... + +..++ .+
T Consensus 60 ~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~-~v~fs~dg~~l~~~~~~~~~~~~v~~wd-~~ 137 (611)
T 1nr0_A 60 HQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVK-DISWDSESKRIAAVGEGRERFGHVFLFD-TG 137 (611)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEE-EEEECTTSCEEEEEECCSSCSEEEEETT-TC
T ss_pred CceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceE-EEEECCCCCEEEEEECCCCceeEEEEee-CC
Confidence 345678999999876 6778999999984 3322 1 2222234456 89999999866543221 2 33333 33
Q ss_pred --cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcce
Q 017317 147 --VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANG 222 (373)
Q Consensus 147 --~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~g 222 (373)
...+ .+ ....++.+++.|++. ..++.+ ..+.|..+|..+++......+ ......
T Consensus 138 ~~~~~l----~g-h~~~v~~v~f~p~~~~~l~s~s-----------------~D~~v~lwd~~~~~~~~~l~~H~~~V~~ 195 (611)
T 1nr0_A 138 TSNGNL----TG-QARAMNSVDFKPSRPFRIISGS-----------------DDNTVAIFEGPPFKFKSTFGEHTKFVHS 195 (611)
T ss_dssp CBCBCC----CC-CSSCEEEEEECSSSSCEEEEEE-----------------TTSCEEEEETTTBEEEEEECCCSSCEEE
T ss_pred CCccee----cC-CCCCceEEEECCCCCeEEEEEe-----------------CCCeEEEEECCCCeEeeeeccccCceEE
Confidence 2211 11 123578899999986 344433 246777788766654433333 234578
Q ss_pred EEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEec------CCCCCCCceeECCCCCEEEEEe
Q 017317 223 VALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVE------NLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 223 i~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~g~p~~i~~d~dG~lwva~~ 282 (373)
++|+|||+ ++++...++.|..++....+. ...+.. .-.+....++++++|++.++..
T Consensus 196 v~fspdg~-~las~s~D~~i~lwd~~~g~~--~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 196 VRYNPDGS-LFASTGGDGTIVLYNGVDGTK--TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEETTTCCE--EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred EEECCCCC-EEEEEECCCcEEEEECCCCcE--eeeeccccccccccCCCEEEEEECCCCCEEEEEe
Confidence 99999998 555555677788888643221 111111 1122345678899998766554
No 222
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.19 E-value=0.00088 Score=64.79 Aligned_cols=182 Identities=12% Similarity=0.010 Sum_probs=101.3
Q ss_pred CCcceEEEecCCCEEEEe-cCCeE------------------EEEEcCCceEEee------------eecCccccCeEEC
Q 017317 77 NGPEDVCVDRNGVLYTAT-RDGWI------------------KRLHKNGTWENWK------------LIGGDTLLGITTT 125 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~-~~g~I------------------~~~~~~g~~~~~~------------~~~~~p~~gl~~d 125 (373)
.+-.++++.|||.+++.. .++.| +.+.++|....+. ....... ++++.
T Consensus 16 ~~v~sv~~SpDG~~iASas~D~TV~d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~-~vawS 94 (588)
T 2j04_A 16 DWKNNLTWARDGTLYLTTFPDISIGQPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPR-VCKPS 94 (588)
T ss_dssp SSSCCEEECTTSCEEEECSSSEEEEEECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEE-EEEEC
T ss_pred ccEEEEEECCCCCEEEEEcCCceeecccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEE-EEEEC
Confidence 346789999999999654 55655 2333444211110 0012245 88899
Q ss_pred CCCcEE-EEECCCcEEEEecCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEE
Q 017317 126 QENEIL-VCDADKGLLKVTEEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKY 203 (373)
Q Consensus 126 ~~g~L~-va~~~~gl~~~~~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 203 (373)
++|... +++..+.+..++.++ ...+. .........+.++++.|||++.++.+ ..|.|..+
T Consensus 95 PdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs-----------------~DGtVkIW 156 (588)
T 2j04_A 95 PIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN-----------------EDGELQFF 156 (588)
T ss_dssp SSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE-----------------TTSEEEEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEc-----------------CCCEEEEE
Confidence 999755 455555566666444 33332 11111123577999999996544432 24788888
Q ss_pred eCCCCeE--------EEeecC----CCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcc-eeEEecCCCCCCCcee
Q 017317 204 DPSLNET--------SILLDS----LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQ-TEIFVENLPGGPDNIK 270 (373)
Q Consensus 204 d~~~~~~--------~~~~~~----~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~g~p~~i~ 270 (373)
|..++.. ..+... ......++|+||| + ++...++.++.+++++..... ...+...-......++
T Consensus 157 d~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--L-aass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 157 SIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--L-VAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp ECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--E-EEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred ECCCCccccccceeeeeeecccccccccEEEEEEcCCc--E-EEEeCCCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 8776642 332111 2345789999998 4 444457788888887654321 1122111113456677
Q ss_pred ECCCCCEEEEEe
Q 017317 271 LAPDGSFWIAIL 282 (373)
Q Consensus 271 ~d~dG~lwva~~ 282 (373)
+. |+..+++.
T Consensus 234 Fs--g~~LASa~ 243 (588)
T 2j04_A 234 IV--DYKVVLTC 243 (588)
T ss_dssp EE--TTEEEEEC
T ss_pred EE--CCEEEEEe
Confidence 75 55555543
No 223
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.18 E-value=0.0037 Score=56.97 Aligned_cols=183 Identities=8% Similarity=0.009 Sum_probs=109.0
Q ss_pred cCCcCCcceEEEecCCCEE-EEecCCeEEEEE-cCCceE-EeeeecCccccCeEECCCCcEEEEECCCcE-EEEe-cCC-
Q 017317 73 EGILNGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE-NWKLIGGDTLLGITTTQENEILVCDADKGL-LKVT-EEG- 146 (373)
Q Consensus 73 ~g~~~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~-~~~~~~~~p~~gl~~d~~g~L~va~~~~gl-~~~~-~~g- 146 (373)
.|.-..-.++++.++|... +++.+|.|..++ ..++.. .+........ .+++.++|.++++....+. ..++ ..+
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~-~~~~sp~g~~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVM-ACAYAPSGCAIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC-EEEECTTSSEEEEESTTSEEEEEECCCCT
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEE-EEEECCCCCEEEEeeCCCCEEEEEEeccc
Confidence 3444556789999988755 677899999998 444433 2222334456 8899999987776544443 3343 211
Q ss_pred -------cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CC
Q 017317 147 -------VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LF 218 (373)
Q Consensus 147 -------~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~ 218 (373)
...+.. ....+..+.+.+++...++.+. .+.|..+|..+++......+ ..
T Consensus 140 ~~~~~~~~~~~~~-----h~~~v~~~~~~~~~~~l~t~s~-----------------D~~v~lwd~~~~~~~~~~~~h~~ 197 (354)
T 2pbi_B 140 NENMAAKKKSVAM-----HTNYLSACSFTNSDMQILTASG-----------------DGTCALWDVESGQLLQSFHGHGA 197 (354)
T ss_dssp TCCSGGGCEEEEE-----CSSCEEEEEECSSSSEEEEEET-----------------TSEEEEEETTTCCEEEEEECCSS
T ss_pred cccccccceeeec-----cCCcEEEEEEeCCCCEEEEEeC-----------------CCcEEEEeCCCCeEEEEEcCCCC
Confidence 111111 1234678889999876555432 47888889887765443332 22
Q ss_pred CcceEEEcc--CCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 219 FANGVALSK--DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 219 ~~~gi~~~~--dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
....+++++ +++ ++++...++.|..|++...+. ...+. .-......+++.++|++.++..
T Consensus 198 ~v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~~~--~~~~~-~h~~~v~~v~~~p~~~~l~s~s 259 (354)
T 2pbi_B 198 DVLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSGQC--VQAFE-THESDVNSVRYYPSGDAFASGS 259 (354)
T ss_dssp CEEEEEECCCSSCC-EEEEEETTSCEEEEETTTCCE--EEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred CeEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCCcE--EEEec-CCCCCeEEEEEeCCCCEEEEEe
Confidence 335667766 466 455555667899998754321 12221 1223355678889998666544
No 224
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.18 E-value=0.00011 Score=67.64 Aligned_cols=151 Identities=16% Similarity=0.164 Sum_probs=94.5
Q ss_pred cceEEEecCCCEEEEecCCeEEEEE-cCCceEEee--eecC-ccccCeEECCCCcEEEE-ECCC--c--EEEEe-cCC-c
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWK--LIGG-DTLLGITTTQENEILVC-DADK--G--LLKVT-EEG-V 147 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~--~~~~-~p~~gl~~d~~g~L~va-~~~~--g--l~~~~-~~g-~ 147 (373)
..++++.|+|.+.+...++.+.+++ .+++..... .... ... .+++.++|..+++ .... + +..++ ..+ .
T Consensus 179 V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~ 257 (365)
T 4h5i_A 179 VKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLS-KINFIADDTVLIAASLKKGKGIVLTKISIKSGNT 257 (365)
T ss_dssp CCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEE-EEEEEETTEEEEEEEESSSCCEEEEEEEEETTEE
T ss_pred eEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEE-EEEEcCCCCEEEEEecCCcceeEEeeccccccee
Confidence 5679999999988666667787777 555433221 1112 234 7889999976654 3222 2 34444 344 2
Q ss_pred EEEee-ccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE-eecCC-CCcceEE
Q 017317 148 TVLAS-HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI-LLDSL-FFANGVA 224 (373)
Q Consensus 148 ~~l~~-~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~-~~~~~-~~~~gi~ 224 (373)
..... ...+ ....+.++++.|||++.++.+. .+.|..+|..+++... +..+. .....++
T Consensus 258 ~~~~~~~~~~-~~~~V~~~~~Spdg~~lasgs~-----------------D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~ 319 (365)
T 4h5i_A 258 SVLRSKQVTN-RFKGITSMDVDMKGELAVLASN-----------------DNSIALVKLKDLSMSKIFKQAHSFAITEVT 319 (365)
T ss_dssp EEEEEEEEES-SCSCEEEEEECTTSCEEEEEET-----------------TSCEEEEETTTTEEEEEETTSSSSCEEEEE
T ss_pred cceeeeeecC-CCCCeEeEEECCCCCceEEEcC-----------------CCEEEEEECCCCcEEEEecCcccCCEEEEE
Confidence 22211 1111 1235788999999987766432 4678889988777543 33332 3357899
Q ss_pred EccCCCEEEEEeCCCCeEEEEEecC
Q 017317 225 LSKDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
|+|||+ ++++.+.++.|..+++..
T Consensus 320 fSpdg~-~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 320 ISPDST-YVASVSAANTIHIIKLPL 343 (365)
T ss_dssp ECTTSC-EEEEEETTSEEEEEECCT
T ss_pred ECCCCC-EEEEEeCCCeEEEEEcCC
Confidence 999999 566666788888888753
No 225
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.15 E-value=5.2e-05 Score=74.29 Aligned_cols=170 Identities=14% Similarity=0.127 Sum_probs=101.4
Q ss_pred cceEEEecCC--CEEEEecCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEE-ECC----CcEEEEe-cCC-cE
Q 017317 79 PEDVCVDRNG--VLYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVC-DAD----KGLLKVT-EEG-VT 148 (373)
Q Consensus 79 P~~ia~d~~G--~l~v~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va-~~~----~gl~~~~-~~g-~~ 148 (373)
....++.++| .+|+....+.+..++ .+|+.+.+..... . .+++++||+.++. ... ..|+.++ .+| .+
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~-~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~ 188 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--F-GFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR 188 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--C-EEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE
T ss_pred ceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--c-eEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce
Confidence 3344555554 466655556666777 4565555544333 5 8889999986653 221 3478888 667 66
Q ss_pred EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCC-CCcceEE---
Q 017317 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL-FFANGVA--- 224 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~-~~~~gi~--- 224 (373)
.+... . .....+++.|||+..++... .....|+++|.++++.+ ..... .....++
T Consensus 189 ~l~~~-~----~~~~~~~~SpDG~~l~~~~~---------------~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 189 VFDSG-E----GSFSSASISPGMKVTAGLET---------------AREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp EECCS-S----CEEEEEEECTTSCEEEEEEC---------------SSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred EeecC-C----CccccceECCCCCEEEEccC---------------CCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 55322 1 23478899999975443211 11237999999988877 43332 2234455
Q ss_pred -----EccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 225 -----LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 225 -----~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
|+||| .++++...++.+..|.+ |. ... ...+....++++ +|++++...
T Consensus 248 ~~~~~~spdg-~~~~~~~~~g~~~l~~~-g~----~~~---~~~~~v~~~~~s-dg~~l~~~s 300 (582)
T 3o4h_A 248 ITWLGYLPDG-RLAVVARREGRSAVFID-GE----RVE---APQGNHGRVVLW-RGKLVTSHT 300 (582)
T ss_dssp EEEEEECTTS-CEEEEEEETTEEEEEET-TE----EEC---CCSSEEEEEEEE-TTEEEEEEE
T ss_pred ccceeEcCCC-cEEEEEEcCCcEEEEEE-CC----eec---cCCCceEEEEec-CCEEEEEEc
Confidence 99999 47777766777777876 32 111 112334457777 887665543
No 226
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.15 E-value=0.00035 Score=69.40 Aligned_cols=197 Identities=14% Similarity=0.029 Sum_probs=106.1
Q ss_pred CcceEEEecCCCEEEEe---cCCe--EEEEEcCCceEEeeeecCcccc---------CeEEC--CCCcE--EEEEC-CCc
Q 017317 78 GPEDVCVDRNGVLYTAT---RDGW--IKRLHKNGTWENWKLIGGDTLL---------GITTT--QENEI--LVCDA-DKG 138 (373)
Q Consensus 78 ~P~~ia~d~~G~l~v~~---~~g~--I~~~~~~g~~~~~~~~~~~p~~---------gl~~d--~~g~L--~va~~-~~g 138 (373)
...++++++++..|+.. .++. |+....+|+.+.+.... .... ..++. +||+. +++.. ...
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~ 103 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAP-WNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQR 103 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTT-CCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCC
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCC-ccccccccccCCccceeeeecCCCeEEEEEECCCCe
Confidence 34566777666666544 2333 34433445444432211 1110 23233 77854 44432 346
Q ss_pred EEEEe-c--C-C-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCC-----
Q 017317 139 LLKVT-E--E-G-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL----- 207 (373)
Q Consensus 139 l~~~~-~--~-g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~----- 207 (373)
|+.++ . . + .+.+.............+++++|||+ |+++..... ..........|+++|.++
T Consensus 104 l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 104 LYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFT--------GEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp EEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEEC--------SSSTTCEEEEEEEEETTSTTTTC
T ss_pred EEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEeccc--------CCCCCCceeEEEEEECCCCcccc
Confidence 88888 4 3 6 55553311100112456789999996 555432100 000001225799999987
Q ss_pred -CeEEEee-cCCCCcceEEEccCCCEEEEEeCCC-------CeEEEEEecC-CCCcceeEEecCCCCCCCceeECCCCCE
Q 017317 208 -NETSILL-DSLFFANGVALSKDEDYLVVCETFK-------FRCLKYWLKG-ESKEQTEIFVENLPGGPDNIKLAPDGSF 277 (373)
Q Consensus 208 -~~~~~~~-~~~~~~~gi~~~~dg~~l~v~~~~~-------~~i~~~~~~~-~~~~~~~~~~~~~~g~p~~i~~d~dG~l 277 (373)
++.+.+. ........++++|||+.|+++.... ..|+.+++++ ........+..........++.++||++
T Consensus 176 ~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 176 RSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred CCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 6666665 4445567789999999888776432 4789999873 3222333333222234556778899997
Q ss_pred EEEEec
Q 017317 278 WIAILQ 283 (373)
Q Consensus 278 wva~~~ 283 (373)
++....
T Consensus 256 ~~~~~~ 261 (662)
T 3azo_A 256 IVATDR 261 (662)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 766543
No 227
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.14 E-value=0.00069 Score=67.93 Aligned_cols=199 Identities=7% Similarity=-0.039 Sum_probs=103.9
Q ss_pred CcceEEEecCCCEE-EEec---------CCeEEEEE-cCCceEEeeeecC---ccccCeEECCCCcEEEEECCCcEEEEe
Q 017317 78 GPEDVCVDRNGVLY-TATR---------DGWIKRLH-KNGTWENWKLIGG---DTLLGITTTQENEILVCDADKGLLKVT 143 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~---------~g~I~~~~-~~g~~~~~~~~~~---~p~~gl~~d~~g~L~va~~~~gl~~~~ 143 (373)
...++++.|||+.. ++.. .+.|+.++ .+|+.+.+....+ ... .+++.+||+..+......|+.++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~ 140 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ-YAGWGPKGQQLIFIFENNIYYCA 140 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS-BCCBCSSTTCEEEEETTEEEEES
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc-ccEECCCCCEEEEEECCeEEEEE
Confidence 36789999999854 4443 26788888 4455443332222 245 78899999644332335688888
Q ss_pred -cCC-cEEEeec-cCCc-------------cccccceeEEcCCCc-EEEEeCCccccccccc------------cc----
Q 017317 144 -EEG-VTVLASH-VNGS-------------RINLADDLIAATDGS-IYFSVASTKFGLHNWG------------LD---- 190 (373)
Q Consensus 144 -~~g-~~~l~~~-~~~~-------------~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~------------~~---- 190 (373)
.+| ...+... ..+. -+....++++.|||+ |.++.... -....+. ..
T Consensus 141 ~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (723)
T 1xfd_A 141 HVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND-SRVPIMELPTYTGSIYPTVKPYHYP 219 (723)
T ss_dssp SSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC-TTSCEEEECCCSSSSSCCCEEEECC
T ss_pred CCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC-CccceEEeeccCCcCCCcceeccCC
Confidence 566 4444322 1110 011236789999996 54443210 0000000 00
Q ss_pred -cccccCCceEEEEeCCCCeE-EEeecC------CCCcceEEEccCCCEEEEE-eCC--CCeEEEEEecCCCCcceeEEe
Q 017317 191 -LLEAKPHGKLLKYDPSLNET-SILLDS------LFFANGVALSKDEDYLVVC-ETF--KFRCLKYWLKGESKEQTEIFV 259 (373)
Q Consensus 191 -~~~~~~~g~l~~~d~~~~~~-~~~~~~------~~~~~gi~~~~dg~~l~v~-~~~--~~~i~~~~~~~~~~~~~~~~~ 259 (373)
.........|+.+|..+++. ..+... ......++|+|||+.++.. +.. ...|+.+++.+.+... ...
T Consensus 220 ~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~--~~~ 297 (723)
T 1xfd_A 220 KAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTK--KHE 297 (723)
T ss_dssp BTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEE--EEE
T ss_pred CCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceE--EEE
Confidence 00001123788999887763 333221 1223468999999866444 322 2357777765543221 111
Q ss_pred cCCCCC----CCceeECCCCC-EEEE
Q 017317 260 ENLPGG----PDNIKLAPDGS-FWIA 280 (373)
Q Consensus 260 ~~~~g~----p~~i~~d~dG~-lwva 280 (373)
....+. +..+++++||+ |+++
T Consensus 298 ~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 298 DESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp EECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred eccCCEEeccCCCceEcCCCCeEEEE
Confidence 111122 24678899997 5443
No 228
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.14 E-value=0.00086 Score=67.14 Aligned_cols=180 Identities=11% Similarity=0.049 Sum_probs=106.8
Q ss_pred CCcceEEEecC-CCEE-EEecCCeEEEEEcC-C-c----e-EEeeeecCccccCeEECCCCcEEEE-ECCCcEEEEe-cC
Q 017317 77 NGPEDVCVDRN-GVLY-TATRDGWIKRLHKN-G-T----W-ENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EE 145 (373)
Q Consensus 77 ~~P~~ia~d~~-G~l~-v~~~~g~I~~~~~~-g-~----~-~~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~ 145 (373)
..-.+|++.++ +.++ +++.++.|..++.+ + . . ..+........ .+++.++|++.++ ...+.|..++ .+
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~-~v~~s~~g~~l~sgs~Dg~v~vwd~~~ 461 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVE-DVVLSSDGQFALSGSWDGELRLWDLAA 461 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEE-EEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 34566777764 3444 77889999998832 1 1 1 12222233455 8899999986654 4444566677 56
Q ss_pred C--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC----CCC
Q 017317 146 G--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS----LFF 219 (373)
Q Consensus 146 g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~----~~~ 219 (373)
+ ...+..+ ...+.++++.++|+..++.+. .+.|..+|..+.....+... ...
T Consensus 462 ~~~~~~~~~h-----~~~v~~~~~s~~~~~l~s~s~-----------------D~~i~iwd~~~~~~~~~~~~~~~h~~~ 519 (694)
T 3dm0_A 462 GVSTRRFVGH-----TKDVLSVAFSLDNRQIVSASR-----------------DRTIKLWNTLGECKYTISEGGEGHRDW 519 (694)
T ss_dssp TEEEEEEECC-----SSCEEEEEECTTSSCEEEEET-----------------TSCEEEECTTSCEEEEECSSTTSCSSC
T ss_pred CcceeEEeCC-----CCCEEEEEEeCCCCEEEEEeC-----------------CCEEEEEECCCCcceeeccCCCCCCCc
Confidence 6 3333211 124678999999976666442 36777777654433333221 122
Q ss_pred cceEEEccCCC-EEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 220 ANGVALSKDED-YLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 220 ~~gi~~~~dg~-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
...+++++++. .++++...++.|..+++...+. ...+. ...+....++++++|++.++..
T Consensus 520 v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~--~~~~~-~h~~~v~~v~~spdg~~l~sg~ 580 (694)
T 3dm0_A 520 VSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKL--RSTLA-GHTGYVSTVAVSPDGSLCASGG 580 (694)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTCCE--EEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred EEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcE--EEEEc-CCCCCEEEEEEeCCCCEEEEEe
Confidence 46788999863 3566666677888888764321 11221 2223456688999998766654
No 229
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.13 E-value=0.00079 Score=60.03 Aligned_cols=181 Identities=18% Similarity=0.133 Sum_probs=97.2
Q ss_pred cCCcCCcceEEEecCCCEE-EEecCCeEEEEEcC-Cc--eEE---eeeecCccccCeEECC--CCcEEE-EECCCcEEEE
Q 017317 73 EGILNGPEDVCVDRNGVLY-TATRDGWIKRLHKN-GT--WEN---WKLIGGDTLLGITTTQ--ENEILV-CDADKGLLKV 142 (373)
Q Consensus 73 ~g~~~~P~~ia~d~~G~l~-v~~~~g~I~~~~~~-g~--~~~---~~~~~~~p~~gl~~d~--~g~L~v-a~~~~gl~~~ 142 (373)
.|.-....++++.++|.+. +++.+|.|..++.. +. .+. +........ .+++.+ ++++++ +...+.+..+
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~d~~~l~s~~~dg~v~vw 86 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIV-AIDWASPEYGRIIASASYDKTVKLW 86 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEE-EEEECCGGGCSEEEEEETTSCEEEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEE-EEEEcCCCCCCEEEEEcCCCeEEEE
Confidence 3434556788999988755 67789999999832 21 122 222234455 889987 476554 5554556666
Q ss_pred e-cCC-c-------EEEeeccCCccccccceeEEcCC--CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEE
Q 017317 143 T-EEG-V-------TVLASHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (373)
Q Consensus 143 ~-~~g-~-------~~l~~~~~~~~~~~~~~l~~~~d--G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 211 (373)
+ ..+ . +.+.. ..+ ....+.++++.++ |.+.++.+. .+.|..+|..+++..
T Consensus 87 d~~~~~~~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~~~l~~~~~-----------------dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 87 EEDPDQEECSGRRWNKLCT-LND-SKGSLYSVKFAPAHLGLKLACLGN-----------------DGILRLYDALEPSDL 147 (351)
T ss_dssp EECTTSCTTSSCSEEEEEE-ECC-CSSCEEEEEECCGGGCSEEEEEET-----------------TCEEEEEECSSTTCT
T ss_pred ecCCCcccccccCcceeee-ecc-cCCceeEEEEcCCCCCcEEEEecC-----------------CCcEEEecCCChHHh
Confidence 6 443 1 22222 111 1235778999998 876655432 467888886654311
Q ss_pred E------ee--------cCCCCcceEEEccC---CCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCC
Q 017317 212 I------LL--------DSLFFANGVALSKD---EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPD 274 (373)
Q Consensus 212 ~------~~--------~~~~~~~gi~~~~d---g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~d 274 (373)
. .. ........++++|+ ++.++++. .++.+..++...........+. ...+....+++.++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 148 RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSA-LEQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPS 225 (351)
T ss_dssp TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEE-TTEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCC
T ss_pred ccccccccccccccccCCcccceeEEEeccCCCCCcEEEEec-CCCcEEEEccCCCceeeeeecC-CCCcceeEEEECCC
Confidence 0 00 11223457889887 77555554 3444433332222111111111 11233456778888
Q ss_pred C
Q 017317 275 G 275 (373)
Q Consensus 275 G 275 (373)
|
T Consensus 226 ~ 226 (351)
T 3f3f_A 226 I 226 (351)
T ss_dssp S
T ss_pred C
Confidence 7
No 230
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.12 E-value=0.0023 Score=62.63 Aligned_cols=41 Identities=20% Similarity=0.409 Sum_probs=27.2
Q ss_pred EEEEEC-CCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCC
Q 017317 320 AVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNT 362 (373)
Q Consensus 320 ~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~ 362 (373)
.+..+| .+|+.+..+....+.. ..+. +...+|++|++...+
T Consensus 486 ~l~a~D~~tG~~lw~~~~~~~~~-~~p~-~~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 486 YLKALDNKDGKELWNFKMPSGGI-GSPM-TYSFKGKQYIGSMYG 527 (571)
T ss_dssp EEEEEETTTCCEEEEEECSSCCC-SCCE-EEEETTEEEEEEEEC
T ss_pred eEEEEECCCCCEEEEEeCCCCcE-eeeE-EEEECCEEEEEEECC
Confidence 578888 5799998887665431 2122 223689999988654
No 231
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.11 E-value=0.00046 Score=69.75 Aligned_cols=169 Identities=8% Similarity=-0.035 Sum_probs=88.3
Q ss_pred eEEEecCCCEE-EEecC---------CeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC-c
Q 017317 81 DVCVDRNGVLY-TATRD---------GWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-V 147 (373)
Q Consensus 81 ~ia~d~~G~l~-v~~~~---------g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~ 147 (373)
++++.|||+.. +++.+ +.++.++ .+|+.+.+....+... ..++.|||+..+......|+.++ .+| .
T Consensus 66 ~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~~~~~~~ 144 (740)
T 4a5s_A 66 DYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQ-WVTWSPVGHKLAYVWNNDIYVKIEPNLPS 144 (740)
T ss_dssp EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEE-EEEECSSTTCEEEEETTEEEEESSTTSCC
T ss_pred ceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcce-eeEECCCCCEEEEEECCeEEEEECCCCce
Confidence 37788988743 44432 5677888 4555444333334455 77899999633332345688888 556 5
Q ss_pred EEEeec-cCCcc-------------ccccceeEEcCCCc-EEEEeCCcccccccccc-------------------cccc
Q 017317 148 TVLASH-VNGSR-------------INLADDLIAATDGS-IYFSVASTKFGLHNWGL-------------------DLLE 193 (373)
Q Consensus 148 ~~l~~~-~~~~~-------------~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~-------------------~~~~ 193 (373)
..+... ..+.. +....++++.|||+ |.++.... -....+.. ...+
T Consensus 145 ~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~-~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 145 YRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFND-TEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp EECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEEC-TTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred EEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcc-cCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 444321 11100 12234588999996 54442110 00000000 0001
Q ss_pred ccCCceEEEEeCCC---C---eEEEeec------CCCCcceEEEccCCCEEEE-EeCCC--CeEEEEEecCCC
Q 017317 194 AKPHGKLLKYDPSL---N---ETSILLD------SLFFANGVALSKDEDYLVV-CETFK--FRCLKYWLKGES 251 (373)
Q Consensus 194 ~~~~g~l~~~d~~~---~---~~~~~~~------~~~~~~gi~~~~dg~~l~v-~~~~~--~~i~~~~~~~~~ 251 (373)
......|+.+|.++ + +...+.. .......++|+|||+.++. ..... ..|+.+++++.+
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 12233688899887 6 4444432 1222346789999984333 33322 257788876543
No 232
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.11 E-value=0.0019 Score=58.29 Aligned_cols=158 Identities=9% Similarity=0.058 Sum_probs=98.2
Q ss_pred eeEeccCCcCCcceEEEecC---C--CEEEEecCCeEEEEE-cCCc-eEEeeee-----cCccccCeEECCC----CcE-
Q 017317 68 VTRLGEGILNGPEDVCVDRN---G--VLYTATRDGWIKRLH-KNGT-WENWKLI-----GGDTLLGITTTQE----NEI- 130 (373)
Q Consensus 68 ~~~~~~g~~~~P~~ia~d~~---G--~l~v~~~~g~I~~~~-~~g~-~~~~~~~-----~~~p~~gl~~d~~----g~L- 130 (373)
...+.++.-....++++.|+ + .++++..++.|..++ .+++ ...+... ..... .+++.++ |.+
T Consensus 10 ~~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~l 88 (366)
T 3k26_A 10 VNSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFY-TCAWTYDSNTSHPLL 88 (366)
T ss_dssp EEEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEE-EEEEEECTTTCCEEE
T ss_pred EEEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEE-EEEeccCCCCCCCEE
Confidence 33455554455678888862 3 366777788898888 3333 2222211 13345 7888777 544
Q ss_pred EEEECCCcEEEEe-cCC--cEEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCC
Q 017317 131 LVCDADKGLLKVT-EEG--VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS 206 (373)
Q Consensus 131 ~va~~~~gl~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 206 (373)
+++...+.|..++ .++ ...+.. ....+.++++.+ ++.+.++.+. .+.|..+|..
T Consensus 89 ~~~~~dg~i~v~d~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~~l~s~~~-----------------dg~i~iwd~~ 146 (366)
T 3k26_A 89 AVAGSRGIIRIINPITMQCIKHYVG-----HGNAINELKFHPRDPNLLLSVSK-----------------DHALRLWNIQ 146 (366)
T ss_dssp EEEETTCEEEEECTTTCCEEEEEES-----CCSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETT
T ss_pred EEecCCCEEEEEEchhceEeeeecC-----CCCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEEEee
Confidence 4455544566677 555 333321 123578899999 8877666432 4788889988
Q ss_pred CCeEEEee----cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecC
Q 017317 207 LNETSILL----DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 207 ~~~~~~~~----~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
+++..... ........++++++++.++.+. .++.|..|++..
T Consensus 147 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~i~d~~~ 192 (366)
T 3k26_A 147 TDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCG-MDHSLKLWRINS 192 (366)
T ss_dssp TTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEE-TTSCEEEEESCS
T ss_pred cCeEEEEecccccccCceeEEEECCCCCEEEEec-CCCCEEEEECCC
Confidence 77655544 2233457899999999665554 466888888753
No 233
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.11 E-value=0.00023 Score=65.39 Aligned_cols=187 Identities=14% Similarity=0.086 Sum_probs=97.2
Q ss_pred cceEEEecCCCE-E-EEec--CCeEEEEEc-CCceEEeeeecCccccCeEECCCCc-EEEEECCCcEEEEe-cCC-cEEE
Q 017317 79 PEDVCVDRNGVL-Y-TATR--DGWIKRLHK-NGTWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG-VTVL 150 (373)
Q Consensus 79 P~~ia~d~~G~l-~-v~~~--~g~I~~~~~-~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g-~~~l 150 (373)
+.++++.++|+. . +... ...|+.++. .++...+.........++.+.+||+ |+.+.....++.++ .++ .+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 455677788864 3 3333 246888884 4444444332333331478899996 54554445688888 556 5444
Q ss_pred eeccCCccccccceeE----------------EcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe
Q 017317 151 ASHVNGSRINLADDLI----------------AATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL 213 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~----------------~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~ 213 (373)
.....+. ...-..|+ +.|+|+ +.+.. .........|+.+|.++++.+.+
T Consensus 118 ~~~~~~~-~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~-------------~~~~~~~~~l~~~d~~~g~~~~~ 183 (396)
T 3c5m_A 118 YTVDEEW-KGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAE-------------FYHTNPTCRLIKVDIETGELEVI 183 (396)
T ss_dssp EECCTTE-EEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHH-------------HHHTCCCEEEEEEETTTCCEEEE
T ss_pred Eeccccc-CCCCCEEEeccCCccccccccccccCCCCcceeeee-------------eccCCCcceEEEEECCCCcEEee
Confidence 3311110 00000111 112221 00000 00012346799999988877766
Q ss_pred ecCCCCcceEEEcc-CCCEEEEEeCCC-----CeEEEEEecCCCCcceeEEecCC-CCCCCceeECCCCC-EEEEEe
Q 017317 214 LDSLFFANGVALSK-DEDYLVVCETFK-----FRCLKYWLKGESKEQTEIFVENL-PGGPDNIKLAPDGS-FWIAIL 282 (373)
Q Consensus 214 ~~~~~~~~gi~~~~-dg~~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~-~g~p~~i~~d~dG~-lwva~~ 282 (373)
.........+.++| |++.++++.... .+|+.++.++... ....... ...+..+++++||+ |+++..
T Consensus 184 ~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~~spdg~~l~~~~~ 257 (396)
T 3c5m_A 184 HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNV---RKIKEHAEGESCTHEFWIPDGSAMAYVSY 257 (396)
T ss_dssp EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCC---EESSCCCTTEEEEEEEECTTSSCEEEEEE
T ss_pred ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCce---eEeeccCCCccccceEECCCCCEEEEEec
Confidence 55444556789999 787666654332 4788888765432 1111111 11234467889996 555544
No 234
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.0052 Score=55.48 Aligned_cols=142 Identities=12% Similarity=0.071 Sum_probs=85.8
Q ss_pred ccccCeEECC--CCcEEE-EECCCcEEEEe-cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCcccccccccccc
Q 017317 117 DTLLGITTTQ--ENEILV-CDADKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDL 191 (373)
Q Consensus 117 ~p~~gl~~d~--~g~L~v-a~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~ 191 (373)
... .+++++ ++++++ +...+.+..++ .++ ....... .....+..+++.|+|.+.++.+.
T Consensus 127 ~v~-~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---~~~~~i~~~~~~pdg~~lasg~~------------ 190 (343)
T 3lrv_A 127 EII-YMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA---KSDVEYSSGVLHKDSLLLALYSP------------ 190 (343)
T ss_dssp CEE-EEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC---CSSCCCCEEEECTTSCEEEEECT------------
T ss_pred CEE-EEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec---CCCCceEEEEECCCCCEEEEEcC------------
Confidence 345 888988 888766 45555677777 666 3222111 11224778999999988776432
Q ss_pred ccccCCceEEEEeCCCCeEE--Eeec-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCC-cceeEEecCCCCCC-
Q 017317 192 LEAKPHGKLLKYDPSLNETS--ILLD-SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESK-EQTEIFVENLPGGP- 266 (373)
Q Consensus 192 ~~~~~~g~l~~~d~~~~~~~--~~~~-~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~g~p- 266 (373)
.+.|..+|..+++.. .+.. .......++|+|+++.|..+. .+.|..|++..... .....+. ....+
T Consensus 191 -----dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~--~~~v~iwd~~~~~~~~~~~~~~--~~~~~~ 261 (343)
T 3lrv_A 191 -----DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC--DQTVVCFDLRKDVGTLAYPTYT--IPEFKT 261 (343)
T ss_dssp -----TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE--SSBEEEEETTSSTTCBSSCCCB--C-----
T ss_pred -----CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe--CCeEEEEEcCCCCcceeecccc--cccccc
Confidence 478888888776543 3322 234457899999999777666 33888898764322 1111111 01122
Q ss_pred --CceeECCCCCEEEEEec
Q 017317 267 --DNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 267 --~~i~~d~dG~lwva~~~ 283 (373)
..++++++|++.++...
T Consensus 262 ~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 262 GTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp CCEEEEECTTSSEEEEEET
T ss_pred cceEEEECCCCCEEEEecC
Confidence 23899999987776543
No 235
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.10 E-value=0.00079 Score=70.83 Aligned_cols=142 Identities=15% Similarity=0.113 Sum_probs=84.5
Q ss_pred EEEecCCC-EEEEecCCeEE-EEEc-CCceEEeeeecCccccCeEECCCCcE-EEEECCCcEEEEe-cCC-cEEEeeccC
Q 017317 82 VCVDRNGV-LYTATRDGWIK-RLHK-NGTWENWKLIGGDTLLGITTTQENEI-LVCDADKGLLKVT-EEG-VTVLASHVN 155 (373)
Q Consensus 82 ia~d~~G~-l~v~~~~g~I~-~~~~-~g~~~~~~~~~~~p~~gl~~d~~g~L-~va~~~~gl~~~~-~~g-~~~l~~~~~ 155 (373)
+++. +|. |++.+.++.|+ .++. .++...+........ .+++++||+. +++.....++.++ .+| ...+.....
T Consensus 343 ~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~-~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~ 420 (1045)
T 1k32_A 343 RGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVF-AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE 420 (1045)
T ss_dssp ECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS
T ss_pred eeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCcccee-eeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC
Confidence 4444 443 34444456777 7774 344444432234456 8899999974 4555555688888 677 554432211
Q ss_pred CccccccceeEEcCCCcEEEEeCCcc-ccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEE
Q 017317 156 GSRINLADDLIAATDGSIYFSVASTK-FGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVV 234 (373)
Q Consensus 156 ~~~~~~~~~l~~~~dG~l~v~~~~~~-~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v 234 (373)
..+..++++|||+..+...... +. ......+.|+.+|.++++...+.........++|++||+.|++
T Consensus 421 ----~~v~~~~~SpDG~~la~~~~~~~~~--------~~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~ 488 (1045)
T 1k32_A 421 ----AMITDFTISDNSRFIAYGFPLKHGE--------TDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYY 488 (1045)
T ss_dssp ----SCCCCEEECTTSCEEEEEEEECSST--------TCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEE
T ss_pred ----CCccceEECCCCCeEEEEecCcccc--------ccCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEE
Confidence 2356889999997443322100 00 0001235799999988876655554455667899999998888
Q ss_pred EeC
Q 017317 235 CET 237 (373)
Q Consensus 235 ~~~ 237 (373)
...
T Consensus 489 ~s~ 491 (1045)
T 1k32_A 489 LSY 491 (1045)
T ss_dssp EES
T ss_pred Eec
Confidence 764
No 236
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.09 E-value=0.0039 Score=61.01 Aligned_cols=63 Identities=11% Similarity=0.124 Sum_probs=40.9
Q ss_pred EEEecCCCEEEEecCCeEEEEE-cCCceEEeeeecC-----ccccCeEECCCCcEEEEEC------CCcEEEEe-cCC
Q 017317 82 VCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGG-----DTLLGITTTQENEILVCDA------DKGLLKVT-EEG 146 (373)
Q Consensus 82 ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~-----~p~~gl~~d~~g~L~va~~------~~gl~~~~-~~g 146 (373)
++++ +|+||+++.++.|+.+| .+|+..-...... .......+. +|.+|++.. ...++.+| .+|
T Consensus 111 ~~~~-~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 111 LAYG-AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTG 186 (571)
T ss_dssp CEEE-TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTC
T ss_pred cEEE-CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCC
Confidence 4665 78999999999999999 5786543222221 111022332 678998865 34688899 678
No 237
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.06 E-value=0.0031 Score=63.30 Aligned_cols=187 Identities=10% Similarity=0.082 Sum_probs=101.4
Q ss_pred ceEEEecCCCEE-EEe-cCC----eEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEECCCc-------------
Q 017317 80 EDVCVDRNGVLY-TAT-RDG----WIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDADKG------------- 138 (373)
Q Consensus 80 ~~ia~d~~G~l~-v~~-~~g----~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~g------------- 138 (373)
.++++.|||+.. ++. .+| .|+.++ .+|+............ ++++.+||+ |+++.....
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~-~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFS-CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSC-CEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccc-eEEEEeCCCEEEEEEECCccccccccccccCC
Confidence 356788888754 333 333 788888 4555443222122245 799999996 665543333
Q ss_pred ---EEEEe-cCC-c--EEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCC---
Q 017317 139 ---LLKVT-EEG-V--TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL--- 207 (373)
Q Consensus 139 ---l~~~~-~~g-~--~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~--- 207 (373)
|++++ .++ . ..+..... . .....++.+++||+ |+++.... ......|+.+|.++
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~-~-~~~~~~~~~SpDg~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPD-E-PKWMGGAELSDDGRYVLLSIREG-------------CDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTT-C-TTCEEEEEECTTSCEEEEEEECS-------------SSSCCEEEEEEGGGSSS
T ss_pred CCEEEEEECCCCcccceEEeccCC-C-CeEEEEEEEcCCCCEEEEEEEcc-------------CCCccEEEEEECccccc
Confidence 77777 444 2 23322211 1 12345788999996 55543210 01135788888765
Q ss_pred ---C--eEEEeecCCCCcceEEEccCCCEEEEEeCC---CCeEEEEEecCCCCcceeEEecCCC-CCCCceeECCCCCEE
Q 017317 208 ---N--ETSILLDSLFFANGVALSKDEDYLVVCETF---KFRCLKYWLKGESKEQTEIFVENLP-GGPDNIKLAPDGSFW 278 (373)
Q Consensus 208 ---~--~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d~dG~lw 278 (373)
+ ..+.+..... .....+++||+.+|+.... +.+|+++++++......+.+..... ....+++...++.++
T Consensus 272 ~~~~~~~~~~l~~~~~-~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 272 GITGILKWVKLIDNFE-GEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLV 350 (710)
T ss_dssp SSCSSCCCEEEECSSS-SCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEE
T ss_pred ccCCccceEEeeCCCC-cEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEE
Confidence 3 3444433322 2233588999988887653 3479999876543222233332222 123345555566666
Q ss_pred EEEec
Q 017317 279 IAILQ 283 (373)
Q Consensus 279 va~~~ 283 (373)
+....
T Consensus 351 ~~~~~ 355 (710)
T 2xdw_A 351 LCYLH 355 (710)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66543
No 238
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.05 E-value=0.0016 Score=60.84 Aligned_cols=157 Identities=8% Similarity=0.033 Sum_probs=93.8
Q ss_pred CCcCCcceEEEecCCCEEEEecCCeEEEEEcC--CceEE-e-------eeecCccccCeEECCCC-cEEE-EECCCcEEE
Q 017317 74 GILNGPEDVCVDRNGVLYTATRDGWIKRLHKN--GTWEN-W-------KLIGGDTLLGITTTQEN-EILV-CDADKGLLK 141 (373)
Q Consensus 74 g~~~~P~~ia~d~~G~l~v~~~~g~I~~~~~~--g~~~~-~-------~~~~~~p~~gl~~d~~g-~L~v-a~~~~gl~~ 141 (373)
+.-....++++.++|.+++...++.|..++.. ++... + ........ .++++++| ++++ +...+.|..
T Consensus 175 ~h~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 175 AHTYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVIT-AAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CCSSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEE-EEEECSSCTTEEEEEETTSCEEE
T ss_pred CCCcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceE-EEEECCCCCcEEEEEeCCCeEEE
Confidence 33445678999999888754478999999844 22211 1 11223355 88999998 6554 455455777
Q ss_pred Ee-cCC-c-----EEEeeccCCcc-------ccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCC
Q 017317 142 VT-EEG-V-----TVLASHVNGSR-------INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL 207 (373)
Q Consensus 142 ~~-~~g-~-----~~l~~~~~~~~-------~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 207 (373)
++ .++ . ..+........ ...+..+++.++|.+.++.+ . +.|..+|..+
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-----------------~-~~v~iwd~~~ 315 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD-----------------Y-LSVKVWDLNM 315 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE-----------------S-SEEEEEETTC
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee-----------------C-CeEEEEeCCC
Confidence 77 555 3 22221110000 01577899999998777643 2 6788888764
Q ss_pred -CeEEEeecCCCC----------------cceEEEccCCCEEEEEeCCCCeEEEEEecCC
Q 017317 208 -NETSILLDSLFF----------------ANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (373)
Q Consensus 208 -~~~~~~~~~~~~----------------~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~ 250 (373)
++.......... ...++|+++++.| ++...++.|..|++...
T Consensus 316 ~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l-~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 316 ENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVV-MTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp CSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEE-EEECSTTEEEEEETTTC
T ss_pred CccccceeeccccccccccccccccccccceEEEECCCCCEE-EEeccCCEEEEEEcCCC
Confidence 332211111111 1138999999955 66667788999987654
No 239
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.003 Score=58.92 Aligned_cols=162 Identities=12% Similarity=0.101 Sum_probs=93.5
Q ss_pred eEeccCCcCCcceEEEec-CCCEE-EEecCCeEEEEEc-C---Cc-e--EEeeeecCccccCeEECCCCcEEE-EECCCc
Q 017317 69 TRLGEGILNGPEDVCVDR-NGVLY-TATRDGWIKRLHK-N---GT-W--ENWKLIGGDTLLGITTTQENEILV-CDADKG 138 (373)
Q Consensus 69 ~~~~~g~~~~P~~ia~d~-~G~l~-v~~~~g~I~~~~~-~---g~-~--~~~~~~~~~p~~gl~~d~~g~L~v-a~~~~g 138 (373)
..+.++.-....++++.+ +|.++ +++.+|.|..++. + +. . .......+... .+++.+++++++ +...+.
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~dg~ 134 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVT-QITMIPNFDAFAVSSKDGQ 134 (437)
T ss_dssp EEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEE-EEEECTTSSEEEEEETTSE
T ss_pred eeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEE-EEEEeCCCCEEEEEeCCCE
Confidence 344344445678899999 88766 6778999999982 2 32 1 11112234456 899999887554 454444
Q ss_pred EEEEe-c---CC-c-EEEeec----cCCc---cccccceeE--EcCCCcEEEEeCCccccccccccccccccCCceEEEE
Q 017317 139 LLKVT-E---EG-V-TVLASH----VNGS---RINLADDLI--AATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKY 203 (373)
Q Consensus 139 l~~~~-~---~g-~-~~l~~~----~~~~---~~~~~~~l~--~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 203 (373)
+..++ . ++ . ...... ..-. ....+..+. ..+++.+.++.+ ..+.|..+
T Consensus 135 i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------------~d~~i~iw 197 (437)
T 3gre_A 135 IIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALT-----------------NLSRVIIF 197 (437)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEE-----------------TTSEEEEE
T ss_pred EEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEe-----------------CCCeEEEE
Confidence 55554 2 34 2 211100 0000 111233343 446776655543 24789999
Q ss_pred eCCCCeEEEeecC---CCCcceEEEccCCCEEEEEeCCCCeEEEEEecC
Q 017317 204 DPSLNETSILLDS---LFFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 204 d~~~~~~~~~~~~---~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
|..+++....... ......++++++++.++.+ ..++.|..|++..
T Consensus 198 d~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~-~~dg~i~iwd~~~ 245 (437)
T 3gre_A 198 DIRTLERLQIIENSPRHGAVSSICIDEECCVLILG-TTRGIIDIWDIRF 245 (437)
T ss_dssp ETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEE-ETTSCEEEEETTT
T ss_pred eCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEE-cCCCeEEEEEcCC
Confidence 9887765443332 3456789999999855555 4566788888754
No 240
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.03 E-value=0.0017 Score=59.64 Aligned_cols=150 Identities=12% Similarity=0.049 Sum_probs=90.1
Q ss_pred CCcceEEEec-CCCEE-EEecCCeEEEEEc-CCceEE-ee-------------eecCccccCeEECC-CCc-EEEEECCC
Q 017317 77 NGPEDVCVDR-NGVLY-TATRDGWIKRLHK-NGTWEN-WK-------------LIGGDTLLGITTTQ-ENE-ILVCDADK 137 (373)
Q Consensus 77 ~~P~~ia~d~-~G~l~-v~~~~g~I~~~~~-~g~~~~-~~-------------~~~~~p~~gl~~d~-~g~-L~va~~~~ 137 (373)
....++++.+ +|.+. +++.+|.|..++. +++... +. ....... .+++.+ +++ |+.+...+
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~~~d~ 122 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVE-TVQWYPHDTGMFTSSSFDK 122 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEE-EEEECTTCTTCEEEEETTS
T ss_pred CcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEE-EEEEccCCCcEEEEEeCCC
Confidence 4457788988 77766 6778999999983 332111 10 0223345 888888 554 44455445
Q ss_pred cEEEEe-cCC-cEEEeeccCCccccccceeEEcC---CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE
Q 017317 138 GLLKVT-EEG-VTVLASHVNGSRINLADDLIAAT---DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (373)
Q Consensus 138 gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~---dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 212 (373)
.+..++ .++ ....... . ..+..+.+.+ ++.+.++.. ..+.|..+|..+++...
T Consensus 123 ~i~iwd~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNF-E----ETVYSHHMSPVSTKHCLVAVGT-----------------RGPKVQLCDLKSGSCSH 180 (408)
T ss_dssp EEEEEETTTTEEEEEEEC-S----SCEEEEEECSSCSSCCEEEEEE-----------------SSSSEEEEESSSSCCCE
T ss_pred eEEEeeCCCCccceeccC-C----CceeeeEeecCCCCCcEEEEEc-----------------CCCeEEEEeCCCcceee
Confidence 567777 555 3222221 1 2345666665 344555432 24678888877665433
Q ss_pred eec-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecC
Q 017317 213 LLD-SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 213 ~~~-~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
... .......++++++++.++++...++.|..|++..
T Consensus 181 ~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~ 218 (408)
T 4a11_B 181 ILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRR 218 (408)
T ss_dssp EECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTC
T ss_pred eecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCC
Confidence 333 2334568999999987666666677899998754
No 241
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.02 E-value=0.00067 Score=64.44 Aligned_cols=164 Identities=12% Similarity=0.120 Sum_probs=93.4
Q ss_pred eEEeeeecCccccCeEECCCCc--EEEEECCCcEEEEecCC-c--EEEeec---c-CC---ccccccceeEEcCC----C
Q 017317 108 WENWKLIGGDTLLGITTTQENE--ILVCDADKGLLKVTEEG-V--TVLASH---V-NG---SRINLADDLIAATD----G 171 (373)
Q Consensus 108 ~~~~~~~~~~p~~gl~~d~~g~--L~va~~~~gl~~~~~~g-~--~~l~~~---~-~~---~~~~~~~~l~~~~d----G 171 (373)
++.++.....|. +|++.++|. |||++....|+.++.+| . +.+... . .+ .....+.+|+++|+ |
T Consensus 6 v~~va~gL~~P~-~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~ 84 (463)
T 2wg3_C 6 IQEVVSGLRQPV-GALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG 84 (463)
T ss_dssp EEEEEEEESSEE-EEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC
T ss_pred EEEeccCCCCce-EEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC
Confidence 456666678899 999999985 99999866677776444 2 122111 1 11 11245678999985 8
Q ss_pred cEEEEeCCccccccccccccccccCCceEEEEeCCCC--------eEEEeec-----CCCCcceEEEccCCCEEEEEeCC
Q 017317 172 SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--------ETSILLD-----SLFFANGVALSKDEDYLVVCETF 238 (373)
Q Consensus 172 ~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--------~~~~~~~-----~~~~~~gi~~~~dg~~l~v~~~~ 238 (373)
.|||+-+...-+... . ......+|.|+....+ ..+++.. ...+...|+|+|||. |||+...
T Consensus 85 ~lYv~yt~~~~~~~~---~--~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 85 KLYVSYTTNQERWAI---G--PHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp EEEEEEEECCCSSCS---S--SSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred EEEEEEeCCCCCccc---C--CcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 999984320000000 0 0000135666653211 1222221 233445799999996 9997432
Q ss_pred -----------------CCeEEEEEecCCC------C-----------cceeEEecCCCCCCCceeECCC-----CCEEE
Q 017317 239 -----------------KFRCLKYWLKGES------K-----------EQTEIFVENLPGGPDNIKLAPD-----GSFWI 279 (373)
Q Consensus 239 -----------------~~~i~~~~~~~~~------~-----------~~~~~~~~~~~g~p~~i~~d~d-----G~lwv 279 (373)
..+|+|++.++.. . ...++|... ...|-++++|++ |+||+
T Consensus 159 ~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G-~RNp~gla~dp~tg~~~G~l~~ 237 (463)
T 2wg3_C 159 GMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHG-LHDPGRCAVDRHPTDININLTI 237 (463)
T ss_dssp TTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEEC-CSSCCBEEEESSCSSTTCSEEE
T ss_pred CCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEEC-CCCcceEEECCCCCCcccceEE
Confidence 3479999987731 0 022445422 235889999987 66554
No 242
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.00 E-value=7.2e-05 Score=68.60 Aligned_cols=186 Identities=8% Similarity=-0.081 Sum_probs=100.7
Q ss_pred CcceEEEecCCC-EEEEecCCeEEEEE-cCCc----eEEeeeecCccccCeEECCCCc-EEEEECCCcEEEEe-cCC-c-
Q 017317 78 GPEDVCVDRNGV-LYTATRDGWIKRLH-KNGT----WENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG-V- 147 (373)
Q Consensus 78 ~P~~ia~d~~G~-l~v~~~~g~I~~~~-~~g~----~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g-~- 147 (373)
...++++.++|. |.+++.++.|..++ .+++ ...+........ .+++.++|+ |+.+...+.+..++ ..+ .
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 135 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAAT-FVRWSPNEDKFAVGSGARVISVCYFEQENDW 135 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEE-EEECCTTSSCCEEEESSSCEEECCC-----C
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceE-EEEECCCCCEEEEEecCCeEEEEEECCcccc
Confidence 356788888776 44777889999888 3333 222222234455 888998886 44555545566666 433 1
Q ss_pred EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCC------------------e
Q 017317 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN------------------E 209 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~------------------~ 209 (373)
... ....+.....+.++++.++|.+.++.+. .+.|..+|...+ +
T Consensus 136 ~~~-~~~~~~h~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 197 (377)
T 3dwl_C 136 WVS-KHLKRPLRSTILSLDWHPNNVLLAAGCA-----------------DRKAYVLSAYVRDVDAKPEASVWGSRLPFNT 197 (377)
T ss_dssp CCC-EEECSSCCSCEEEEEECTTSSEEEEEES-----------------SSCEEEEEECCSSCC-CCCSCSSCSCCCEEE
T ss_pred eee-eEeecccCCCeEEEEEcCCCCEEEEEeC-----------------CCEEEEEEEEecccCCCccccccccccchhh
Confidence 111 1111112245788999999986665432 355666664321 1
Q ss_pred EEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcc--eeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 210 TSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQ--TEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 210 ~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
.............++|+|+++.++.+ ..++.|..|++....... ...+. ........+++.++|++.++....
T Consensus 198 ~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 198 VCAEYPSGGWVHAVGFSPSGNALAYA-GHDSSVTIAYPSAPEQPPRALITVK-LSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp EEECCCCSSSEEEEEECTTSSCEEEE-ETTTEEC-CEECSTTSCEEECCCEE-CSSSCEEEEEEEETTEEEEEESSS
T ss_pred hhhcccCCceEEEEEECCCCCEEEEE-eCCCcEEEEECCCCCCcceeeEeec-CCCCceEEEEEcCCCCEEEEEcCC
Confidence 11111222234678999999955555 456788888876543210 11111 112234567888888877665443
No 243
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.003 Score=56.88 Aligned_cols=152 Identities=10% Similarity=0.033 Sum_probs=86.8
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEEcCC--------ce-EEeeeecCccccCeEECCCCcEEEE-ECCCcEEEEe-c
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKNG--------TW-ENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-E 144 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~~~g--------~~-~~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~ 144 (373)
..-.++++.++|.+. +++.++.|..++... +. ..+........ ++++.++|+++++ ...+.+..++ .
T Consensus 59 ~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 59 KAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVK-GVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEE-EEEECTTSCEEEEEETTSCEEEEECC
T ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEE-EEEECCCCCEEEEEeCCCEEEEEecc
Confidence 345678999988866 677889998887421 11 11112223455 8999999976554 5445566676 3
Q ss_pred C-C--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEE--EeecC-CC
Q 017317 145 E-G--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS--ILLDS-LF 218 (373)
Q Consensus 145 ~-g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~--~~~~~-~~ 218 (373)
. + .+.+.. ..+ ....+..+++.|+|.+.++.+. .+.|..+|..++..+ ....+ ..
T Consensus 138 ~~~~~~~~~~~-~~~-h~~~v~~v~~~p~~~~l~s~s~-----------------D~~i~iW~~~~~~~~~~~~~~~h~~ 198 (330)
T 2hes_X 138 ESGEEYECISV-LQE-HSQDVKHVIWHPSEALLASSSY-----------------DDTVRIWKDYDDDWECVAVLNGHEG 198 (330)
T ss_dssp TTCCCCEEEEE-ECC-CSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEEEETTEEEEEEEECCCSS
T ss_pred CCCCCeEEEEE-ecc-CCCceEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCCeeEEEEccCCCC
Confidence 2 2 232221 111 1235778999999987777543 345555554434222 22222 23
Q ss_pred CcceEEEccC--CCEEEEEeCCCCeEEEEEecC
Q 017317 219 FANGVALSKD--EDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 219 ~~~gi~~~~d--g~~l~v~~~~~~~i~~~~~~~ 249 (373)
....++|+++ +. .+++...++.|..+++.+
T Consensus 199 ~v~~~~~~~~~~~~-~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 199 TVWSSDFDKTEGVF-RLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp CEEEEEECCSSSSC-EEEEEETTSCEEEEEEEE
T ss_pred cEEEEEecCCCCee-EEEEEeCCCeEEEEEecC
Confidence 3467889998 44 445555566777777643
No 244
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.99 E-value=0.00066 Score=62.29 Aligned_cols=179 Identities=11% Similarity=-0.007 Sum_probs=101.9
Q ss_pred cceEEEecCCCEE-EEecCCeEEEEEcCCce-EEeeeecCccccCeEECCCCc-EEE-EECCCcEEEEe-cCC---cEEE
Q 017317 79 PEDVCVDRNGVLY-TATRDGWIKRLHKNGTW-ENWKLIGGDTLLGITTTQENE-ILV-CDADKGLLKVT-EEG---VTVL 150 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~~g~I~~~~~~g~~-~~~~~~~~~p~~gl~~d~~g~-L~v-a~~~~gl~~~~-~~g---~~~l 150 (373)
..++++.++|... +++.++.|..++.+++. ..+........ .+++.+++. +++ +...+.+..++ .++ ...+
T Consensus 166 v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 244 (383)
T 3ei3_B 166 YCCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVT-HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYI 244 (383)
T ss_dssp EEEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEECSSSCEE-EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEE
T ss_pred eEEEEECCCCCEEEEECCCCCEEEEECCCCEEEEeccCCCcEE-EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceE
Confidence 4567788877655 67788999999865543 33333344556 899999997 554 45445566677 441 1111
Q ss_pred eeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEE-EeecC------CCCcc-
Q 017317 151 ASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-ILLDS------LFFAN- 221 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~~~------~~~~~- 221 (373)
.... ....+..+++++ +|.+.++.+. .+.|..+|..+++.. .+... ...+.
T Consensus 245 ~~~~---~~~~v~~~~~s~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (383)
T 3ei3_B 245 AEMP---HEKPVNAAYFNPTDSTKLLTTDQ-----------------RNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIK 304 (383)
T ss_dssp EEEE---CSSCEEEEEECTTTSCEEEEEES-----------------SSEEEEEETTBTTSCSEEEECCBCCCTTSCCCC
T ss_pred EEec---CCCceEEEEEcCCCCCEEEEEcC-----------------CCcEEEEECCCCccccccccccccccccccceE
Confidence 1111 123577899999 9976665432 467888887654321 11100 01111
Q ss_pred ----------eEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC-CCCCCCceeECCCCCEEEEEec
Q 017317 222 ----------GVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN-LPGGPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 222 ----------gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d~dG~lwva~~~ 283 (373)
.+++++|++. +...++.|..|++...+. ...+... ..+....++++++|++.++..+
T Consensus 305 ~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~--~~~l~~~~~~~~~~~~~~s~~g~~l~s~sd 372 (383)
T 3ei3_B 305 ATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGL--VHQLRDPNAAGIISLNKFSPTGDVLASGMG 372 (383)
T ss_dssp CEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCE--EEEECBTTBCSCCCEEEECTTSSEEEEEET
T ss_pred EeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCce--eeeecCCCCCceEEEEEEecCccEEEEecC
Confidence 1445555552 334567788888754321 2222211 1234555689999987766643
No 245
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.98 E-value=0.0057 Score=61.12 Aligned_cols=38 Identities=18% Similarity=0.178 Sum_probs=24.9
Q ss_pred EEEEEC-CCCcEEEEEeCCCCceecceeEEEEeCCEEEEee
Q 017317 320 AVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGS 359 (373)
Q Consensus 320 ~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs 359 (373)
.+..+| .+|+++..+..+.+.....+ .. ..+|+.|+..
T Consensus 499 ~l~a~D~~tG~~lw~~~~~~~~~~~p~-~y-~~~G~~~v~~ 537 (677)
T 1kb0_A 499 RLVAYHAATGEKLWEAPTGTGVVAAPS-TY-MVDGRQYVSV 537 (677)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSCCE-EE-EETTEEEEEE
T ss_pred cEEEEECCCCceeeeeeCCCCcccCCE-EE-EeCCEEEEEE
Confidence 578888 57999999987665422222 22 3578888764
No 246
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.97 E-value=0.00064 Score=70.36 Aligned_cols=180 Identities=12% Similarity=0.028 Sum_probs=109.4
Q ss_pred cCCcceEEEecCCCEE-EEecCCeEEEEEcCCc-eEEeeeecCccccCeEECCCCc-EEEEECCCcEEEEe-cCC--cEE
Q 017317 76 LNGPEDVCVDRNGVLY-TATRDGWIKRLHKNGT-WENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG--VTV 149 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~-v~~~~g~I~~~~~~g~-~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g--~~~ 149 (373)
-....+++++++|.+. +|+.+|.|..++..+. ............ .+++.+ |+ |..+...+.+..++ .++ ...
T Consensus 17 ~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~-~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~ 94 (902)
T 2oaj_A 17 SSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIK-EMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTT 94 (902)
T ss_dssp SSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEE-EEEEET-TTEEEEEETTCEEEEEETTTCSEEEE
T ss_pred CCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEE-EEEEcC-CCEEEEEECcCeEEEEECCCCcEEEE
Confidence 3457889999998876 7788999999985433 222212223345 889988 77 55566656677777 566 333
Q ss_pred EeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-----------c-CC
Q 017317 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-----------D-SL 217 (373)
Q Consensus 150 l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-----------~-~~ 217 (373)
+. .. ..+..++++|+|...++.+ ..|.|..+|.++++...+. . ..
T Consensus 95 ~~--~~----~~V~~v~~sp~g~~l~sgs-----------------~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 95 VF--VP----GKITSIDTDASLDWMLIGL-----------------QNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp EE--CS----SCEEEEECCTTCSEEEEEE-----------------TTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC
T ss_pred Ec--CC----CCEEEEEECCCCCEEEEEc-----------------CCCcEEEEECCCCccccceeccccccccccccCC
Confidence 32 11 2477899999997555432 2478888888877643211 0 11
Q ss_pred CCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC-C----------------CCCCCceeECCCCCEEEE
Q 017317 218 FFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN-L----------------PGGPDNIKLAPDGSFWIA 280 (373)
Q Consensus 218 ~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~----------------~g~p~~i~~d~dG~lwva 280 (373)
.....++|+|++..++++...++.+ .+++...+. ...+... . ......+++.++|++.++
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~las 228 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI--KQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIIT 228 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE--EEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce--EEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEE
Confidence 2346899999754455566667777 888754321 1122111 0 022455788899986666
Q ss_pred Eec
Q 017317 281 ILQ 283 (373)
Q Consensus 281 ~~~ 283 (373)
...
T Consensus 229 gs~ 231 (902)
T 2oaj_A 229 IHE 231 (902)
T ss_dssp EET
T ss_pred EEC
Confidence 543
No 247
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.97 E-value=0.0084 Score=53.40 Aligned_cols=183 Identities=11% Similarity=0.005 Sum_probs=103.4
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEEcCC-ceEEee-eecCccccCeEECCCCcE-EEEECCCcEEEEe-cCCcEEEe
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLHKNG-TWENWK-LIGGDTLLGITTTQENEI-LVCDADKGLLKVT-EEGVTVLA 151 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~~~g-~~~~~~-~~~~~p~~gl~~d~~g~L-~va~~~~gl~~~~-~~g~~~l~ 151 (373)
....++++.++|.+. ++..++.|..++... ...... ....... ...+.+++.. +.+...+.+..++ ........
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~ 165 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVL-SVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV 165 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCcee-EEEEeecCccceeecCCCeEEEEEeCCCceEEE
Confidence 446778899988765 677889998888433 222222 2223334 5566677754 4455544555566 33322211
Q ss_pred eccCCccccccceeEEcCCC--cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCC-CCcceEEEccC
Q 017317 152 SHVNGSRINLADDLIAATDG--SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL-FFANGVALSKD 228 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG--~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~-~~~~gi~~~~d 228 (373)
. ..+ ....+..+++.+++ .+.++.+ ..+.|..+|..+++......+. .....++++|+
T Consensus 166 ~-~~~-~~~~v~~~~~~~~~~~~~~~s~~-----------------~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~ 226 (340)
T 4aow_A 166 Q-DES-HSEWVSCVRFSPNSSNPIIVSCG-----------------WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPD 226 (340)
T ss_dssp C-SSS-CSSCEEEEEECSCSSSCEEEEEE-----------------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT
T ss_pred E-ecc-ccCcccceEEccCCCCcEEEEEc-----------------CCCEEEEEECCCCceeeEecCCCCcEEEEEECCC
Confidence 1 111 12245566776654 4555533 2367888888877655444332 23467999999
Q ss_pred CCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 229 EDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 229 g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
++.++ +...++.|..|++.... ....+. .......+++.+++.+.++...+
T Consensus 227 ~~~l~-s~s~Dg~i~iwd~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~~~~d~ 277 (340)
T 4aow_A 227 GSLCA-SGGKDGQAMLWDLNEGK--HLYTLD--GGDIINALCFSPNRYWLCAATGP 277 (340)
T ss_dssp SSEEE-EEETTCEEEEEETTTTE--EEEEEE--CSSCEEEEEECSSSSEEEEEETT
T ss_pred CCEEE-EEeCCCeEEEEEeccCc--eeeeec--CCceEEeeecCCCCceeeccCCC
Confidence 99554 44456788888865432 112221 12234556777888877776554
No 248
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.96 E-value=0.0094 Score=53.74 Aligned_cols=182 Identities=15% Similarity=0.167 Sum_probs=99.1
Q ss_pred CcceEEEecCCCEEEEecCCeEEEEEcCC-ceEEeeee---cCccccCeEECCCCcEEEEECCCcEEEEecCC--cEEEe
Q 017317 78 GPEDVCVDRNGVLYTATRDGWIKRLHKNG-TWENWKLI---GGDTLLGITTTQENEILVCDADKGLLKVTEEG--VTVLA 151 (373)
Q Consensus 78 ~P~~ia~d~~G~l~v~~~~g~I~~~~~~g-~~~~~~~~---~~~p~~gl~~d~~g~L~va~~~~gl~~~~~~g--~~~l~ 151 (373)
...+|++..++.+|+....|.|++-...| .++..... ...+..++++++ +++|++....++++-...| .+.+.
T Consensus 37 ~~~~v~~~~~~~~~~~G~~g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~~ 115 (327)
T 2xbg_A 37 TILDMSFIDRHHGWLVGVNATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NEGWIVGEPPIMLHTTDGGQSWSQIP 115 (327)
T ss_dssp CEEEEEESSSSCEEEEETTTEEEEESSTTSSCEECCCCCSCCCCEEEEEEEET-TEEEEEEETTEEEEESSTTSSCEECC
T ss_pred cEEEEEECCCCcEEEEcCCCeEEEeCCCCCCCeECCCCCCCCCccEEEEEecC-CeEEEEECCCeEEEECCCCCCceECc
Confidence 45667776678889766677777654334 34443221 122222788875 7888875444455543444 44432
Q ss_pred eccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCC-CCcceEEEccCCC
Q 017317 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL-FFANGVALSKDED 230 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~-~~~~gi~~~~dg~ 230 (373)
... ..+ ..+..|++.+++++|++.. .|.|++-+-.+...+.+.... ....+++++++++
T Consensus 116 ~~~-~~~-~~~~~i~~~~~~~~~~~~~------------------~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~ 175 (327)
T 2xbg_A 116 LDP-KLP-GSPRLIKALGNGSAEMITN------------------VGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGE 175 (327)
T ss_dssp CCT-TCS-SCEEEEEEEETTEEEEEET------------------TCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSC
T ss_pred ccc-CCC-CCeEEEEEECCCCEEEEeC------------------CccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCc
Confidence 211 011 1245677777888888753 256777654444555543322 2235678888887
Q ss_pred EEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 231 YLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
+|+... ...+++-+-.+.. ...............++++++|++|++...+
T Consensus 176 -~~~~g~-~G~~~~S~d~gG~--tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G 225 (327)
T 2xbg_A 176 -YVAVSS-RGSFYSTWEPGQT--AWEPHNRTTSRRLHNMGFTPDGRLWMIVNGG 225 (327)
T ss_dssp -EEEEET-TSSEEEEECTTCS--SCEEEECCSSSCEEEEEECTTSCEEEEETTT
T ss_pred -EEEEEC-CCcEEEEeCCCCC--ceeECCCCCCCccceeEECCCCCEEEEeCCc
Confidence 454443 3456665422111 1122211122234457778899999887654
No 249
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.95 E-value=0.0026 Score=57.23 Aligned_cols=184 Identities=11% Similarity=0.033 Sum_probs=101.1
Q ss_pred EeccCCcCCcceEEEecCCCEE--EEec---CCeEEEEE-cCCceEEee--eecCccccCeEECCC---Cc-EEEEECCC
Q 017317 70 RLGEGILNGPEDVCVDRNGVLY--TATR---DGWIKRLH-KNGTWENWK--LIGGDTLLGITTTQE---NE-ILVCDADK 137 (373)
Q Consensus 70 ~~~~g~~~~P~~ia~d~~G~l~--v~~~---~g~I~~~~-~~g~~~~~~--~~~~~p~~gl~~d~~---g~-L~va~~~~ 137 (373)
.+..+.-....++++.++|..+ +++. +|.|..++ .+++..... ....... .+++.++ |+ |+++...+
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIK-CGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEE-EEECTTCCTTTCCEEEEETTS
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEE-EEEEcCCCCCCceEEEecCCC
Confidence 3333434557789999988544 3434 78898888 445443222 2233455 8889887 44 55666555
Q ss_pred cEEEEe-cCC---cEEEeeccCCcccccccee------EEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCC
Q 017317 138 GLLKVT-EEG---VTVLASHVNGSRINLADDL------IAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSL 207 (373)
Q Consensus 138 gl~~~~-~~g---~~~l~~~~~~~~~~~~~~l------~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 207 (373)
.+..++ .++ ...+... ...+..+ ++.++|...++.+. .+.|..+|..+
T Consensus 91 ~i~iwd~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~s~~~~~l~~~~~-----------------d~~i~vwd~~~ 148 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVYSVKGH-----KEIINAIDGIGGLGIGEGAPEIVTGSR-----------------DGTVKVWDPRQ 148 (357)
T ss_dssp CEEEECTTSCSSCSEEECCC-----SSCEEEEEEESGGGCC-CCCEEEEEET-----------------TSCEEEECTTS
T ss_pred eEEEEeCCCCCccEEEEEec-----ccceEEEeeccccccCCCccEEEEEeC-----------------CCeEEEEeCCC
Confidence 677777 443 2222211 1234455 45678876665432 46788888776
Q ss_pred Ce--EEEeecCC----CCcceEE----EccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECC---C
Q 017317 208 NE--TSILLDSL----FFANGVA----LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAP---D 274 (373)
Q Consensus 208 ~~--~~~~~~~~----~~~~gi~----~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~---d 274 (373)
++ ...+.... .....++ ++++++.++.+ ..++.|..|++..... .... ........+++++ +
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~-~~d~~i~i~d~~~~~~---~~~~-~~~~~v~~~~~~~~~~~ 223 (357)
T 3i2n_A 149 KDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAG-YDNGDIKLFDLRNMAL---RWET-NIKNGVCSLEFDRKDIS 223 (357)
T ss_dssp CSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEE-ETTSEEEEEETTTTEE---EEEE-ECSSCEEEEEESCSSSS
T ss_pred CCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEE-ccCCeEEEEECccCce---eeec-CCCCceEEEEcCCCCCC
Confidence 54 22221111 1223444 67899855555 4567899998765432 1111 2234456688887 7
Q ss_pred CCEEEEE
Q 017317 275 GSFWIAI 281 (373)
Q Consensus 275 G~lwva~ 281 (373)
|++.++.
T Consensus 224 ~~~l~~~ 230 (357)
T 3i2n_A 224 MNKLVAT 230 (357)
T ss_dssp CCEEEEE
T ss_pred CCEEEEE
Confidence 7755544
No 250
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.93 E-value=0.011 Score=53.34 Aligned_cols=178 Identities=10% Similarity=0.023 Sum_probs=101.0
Q ss_pred CCcceEEE-----ec-CCCEE-EEecCCeEEEEEcC-Cc-------e-EEeeeecCccccCeEECCCCcEEEE-ECCCcE
Q 017317 77 NGPEDVCV-----DR-NGVLY-TATRDGWIKRLHKN-GT-------W-ENWKLIGGDTLLGITTTQENEILVC-DADKGL 139 (373)
Q Consensus 77 ~~P~~ia~-----d~-~G~l~-v~~~~g~I~~~~~~-g~-------~-~~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl 139 (373)
..-.++++ .+ +|.+. .++.++.|..++.. ++ . ..+........ .+++.+++.+.++ ...+.+
T Consensus 22 ~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~-~~~~~~~~~~l~s~s~D~~v 100 (343)
T 2xzm_R 22 DWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVS-DLALSQENCFAISSSWDKTL 100 (343)
T ss_dssp SCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEE-EEEECSSTTEEEEEETTSEE
T ss_pred hhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceE-EEEECCCCCEEEEEcCCCcE
Confidence 33456776 44 66655 67788999888832 11 1 11111223345 8899999986654 444456
Q ss_pred EEEe-cCC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec-
Q 017317 140 LKVT-EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD- 215 (373)
Q Consensus 140 ~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~- 215 (373)
..++ .++ ...+... ...+.++++.|+|+..++.+. .+.|..+|..+........
T Consensus 101 ~lwd~~~~~~~~~~~~h-----~~~v~~v~~sp~~~~l~s~~~-----------------d~~i~~wd~~~~~~~~~~~~ 158 (343)
T 2xzm_R 101 RLWDLRTGTTYKRFVGH-----QSEVYSVAFSPDNRQILSAGA-----------------EREIKLWNILGECKFSSAEK 158 (343)
T ss_dssp EEEETTSSCEEEEEECC-----CSCEEEEEECSSTTEEEEEET-----------------TSCEEEEESSSCEEEECCTT
T ss_pred EEEECCCCcEEEEEcCC-----CCcEEEEEECCCCCEEEEEcC-----------------CCEEEEEeccCCceeeeecc
Confidence 6667 566 3333211 135778999999987666432 3667777766433322221
Q ss_pred --CCCCcceEEEccCC----------CEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 216 --SLFFANGVALSKDE----------DYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 216 --~~~~~~gi~~~~dg----------~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
.......++++|++ . ++++...++.|..|+... .....+. ...+....++++++|++.++..
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~---~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAP-YFASVGWDGRLKVWNTNF---QIRYTFK-AHESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCC-EEEEEETTSEEEEEETTT---EEEEEEE-CCSSCEEEEEECTTSSEEEEEE
T ss_pred cCCCceeeeeeeccccccccccCCCCC-EEEEEcCCCEEEEEcCCC---ceeEEEc-CccccceEEEECCCCCEEEEEc
Confidence 11223567888876 4 455555677888887322 1111222 2223455688899998665543
No 251
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.93 E-value=0.0017 Score=58.76 Aligned_cols=172 Identities=11% Similarity=0.011 Sum_probs=96.1
Q ss_pred CCEEEEecCCeEEEEE-cCCceEEeeeecCccccCeEECC-------CCcEEEEECCCcEEEEe-cCC--cEEEeeccCC
Q 017317 88 GVLYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQ-------ENEILVCDADKGLLKVT-EEG--VTVLASHVNG 156 (373)
Q Consensus 88 G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~-------~g~L~va~~~~gl~~~~-~~g--~~~l~~~~~~ 156 (373)
..+..|..+|.|..++ .+++...... ..... .+.+.+ |+.+.+-+....+..++ ..+ .+.+.. +
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~-~~~~~~~~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~---~ 123 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITTIT-TPNPR-TGGEHPAIISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV---D 123 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEEEE-EECCC-TTCCCCSEEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC---C
T ss_pred CEEEEECCCCcEEEEECCCCcEEEEEe-cCCce-eeeeCCceEEecCCCeEEEEEccCceEEeecCCcceeEEeec---C
Confidence 3455788999999999 4554322111 12223 433333 34444433333333334 233 111111 1
Q ss_pred ccccccceeEEcC--CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC--CCCcceEEEccCCCEE
Q 017317 157 SRINLADDLIAAT--DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVALSKDEDYL 232 (373)
Q Consensus 157 ~~~~~~~~l~~~~--dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~~gi~~~~dg~~l 232 (373)
....+..+++.+ +|.++++.+. .+.|..+|..+++....... ......++++||++ +
T Consensus 124 -~~~~v~~~~~~~~~~~~~l~s~s~-----------------dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~ 184 (343)
T 3lrv_A 124 -SANEIIYMYGHNEVNTEYFIWADN-----------------RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-L 184 (343)
T ss_dssp -CSSCEEEEECCC---CCEEEEEET-----------------TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-E
T ss_pred -CCCCEEEEEcCCCCCCCEEEEEeC-----------------CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-E
Confidence 112467889999 8988776542 47788888887766443322 22467899999998 5
Q ss_pred EEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecC
Q 017317 233 VVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 233 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
+++...++.|..|++....... ..+...-.+....++++++|++.++...+
T Consensus 185 lasg~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~l~fs~~g~~l~s~~~~ 235 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSSPDQAS-SRFPVDEEAKIKEVKFADNGYWMVVECDQ 235 (343)
T ss_dssp EEEECTTSCEEEEESSCTTSCC-EECCCCTTSCEEEEEECTTSSEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCCCc-cEEeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 5555567789999976543220 12221112345678899999877666544
No 252
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.92 E-value=0.0056 Score=55.24 Aligned_cols=226 Identities=10% Similarity=0.026 Sum_probs=121.3
Q ss_pred ceEEEecCCCEEEEecCCeEEEEEcCC-ceEEeeee---cCccccCeEECCCCcEEEEECCCcEEEEecCC--cEEEeec
Q 017317 80 EDVCVDRNGVLYTATRDGWIKRLHKNG-TWENWKLI---GGDTLLGITTTQENEILVCDADKGLLKVTEEG--VTVLASH 153 (373)
Q Consensus 80 ~~ia~d~~G~l~v~~~~g~I~~~~~~g-~~~~~~~~---~~~p~~gl~~d~~g~L~va~~~~gl~~~~~~g--~~~l~~~ 153 (373)
.+|++++ +.+|+....|.|++-...| .++..... ++.+. +|++..++++|++....++++-...| .+.+...
T Consensus 83 ~~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~~~ 160 (327)
T 2xbg_A 83 NSVSFQG-NEGWIVGEPPIMLHTTDGGQSWSQIPLDPKLPGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQALVQE 160 (327)
T ss_dssp EEEEEET-TEEEEEEETTEEEEESSTTSSCEECCCCTTCSSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEEEEECS
T ss_pred EEEEecC-CeEEEEECCCeEEEECCCCCCceECccccCCCCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCEEeecC
Confidence 4577775 7889766678787754334 34443321 23456 77776778899887655566655445 4444322
Q ss_pred cCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCC-CCeEEEeecC-CCCcceEEEccCCCE
Q 017317 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPS-LNETSILLDS-LFFANGVALSKDEDY 231 (373)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~~~~~~~~~-~~~~~gi~~~~dg~~ 231 (373)
.. ....+++++++|.+|+... .|.+++-+.. +...+.+... ......++++++++
T Consensus 161 ~~----~~~~~~~~~~~~~~~~~g~------------------~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~- 217 (327)
T 2xbg_A 161 AI----GVMRNLNRSPSGEYVAVSS------------------RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR- 217 (327)
T ss_dssp CC----CCEEEEEECTTSCEEEEET------------------TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-
T ss_pred CC----cceEEEEEcCCCcEEEEEC------------------CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-
Confidence 11 2456788889998887653 2677776533 2333433221 12335677888887
Q ss_pred EEEEeCCCCeEEEEEecCCCCcceeEEecC-CCC--CCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchh
Q 017317 232 LVVCETFKFRCLKYWLKGESKEQTEIFVEN-LPG--GPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKL 308 (373)
Q Consensus 232 l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~g--~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 308 (373)
+|++.. ...+++...++. ......... ++. ....+++++++.+|++...+
T Consensus 218 ~~~~~~-~G~~~~s~~D~G--~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g------------------------ 270 (327)
T 2xbg_A 218 LWMIVN-GGKIAFSDPDNS--ENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAG------------------------ 270 (327)
T ss_dssp EEEEET-TTEEEEEETTEE--EEECCCBCTTSSCCSCEEEEEESSSSCEEEEESTT------------------------
T ss_pred EEEEeC-CceEEEecCCCC--CeeEeccCCcccCCcceEEEEecCCCEEEEEeCCC------------------------
Confidence 676654 344554422211 011111100 111 11235567788999987654
Q ss_pred hhhccCCCccEEEEEECCCCcEEEEEeCCCCceecceeEEEE-eCCEEEEeeCCCCeEEEeeC
Q 017317 309 IKLVAPLHKKAAVVNVAANGIVIRKFEDPNGKVMSFVTSALE-FDDHLYLGSLNTNFIGKLPL 370 (373)
Q Consensus 309 ~~~~~~~~~~g~v~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~vgs~~~~~i~~~~l 370 (373)
.+++-...|+....+....+.. ..+..+.. .++++|+.+..+ .|.+++-
T Consensus 271 -----------~i~~S~DgG~tW~~~~~~~~~~-~~~~~v~~~~~~~~~~~G~~G-~i~~~~~ 320 (327)
T 2xbg_A 271 -----------ALLCSQDGGQTWQQDVDVKKVP-SNFYKILFFSPDQGFILGQKG-ILLRYVT 320 (327)
T ss_dssp -----------CEEEESSTTSSCEECGGGTTSS-SCCCEEEEEETTEEEEECSTT-EEEEECC
T ss_pred -----------eEEEeCCCCcccEEcCccCCCC-CCeEEEEEECCCceEEEcCCc-eEEEEcC
Confidence 1333334466655544221111 12334443 467888888755 5766653
No 253
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=97.92 E-value=0.0017 Score=59.75 Aligned_cols=152 Identities=13% Similarity=0.167 Sum_probs=95.8
Q ss_pred cceEEEec-CCCEE-EEecCCeEEEEEc--CCc-eEEeeeecCccccCeEECCCCcEEEEE-CCCcEEEEe-cCC--cEE
Q 017317 79 PEDVCVDR-NGVLY-TATRDGWIKRLHK--NGT-WENWKLIGGDTLLGITTTQENEILVCD-ADKGLLKVT-EEG--VTV 149 (373)
Q Consensus 79 P~~ia~d~-~G~l~-v~~~~g~I~~~~~--~g~-~~~~~~~~~~p~~gl~~d~~g~L~va~-~~~gl~~~~-~~g--~~~ 149 (373)
..++++.+ ++.++ .++.++.|..+|. .++ ...+....+... .+++.++|+.+++. ..+.+..+| .++ ...
T Consensus 208 v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 208 VLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDIN-SVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp EEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCC-EEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeE-EEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 34456655 66655 6778999999983 222 333333344556 89999999866654 334566677 666 333
Q ss_pred EeeccC--CccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec-----CCCCcce
Q 017317 150 LASHVN--GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-----SLFFANG 222 (373)
Q Consensus 150 l~~~~~--~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-----~~~~~~g 222 (373)
+..... ......+..+++.++|.+.++.+. .|.|+.+|..+++...... .......
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~-----------------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 349 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISGRLLFAGYS-----------------NGDCYVWDTLLAEMVLNLGTLQNSHEGRISC 349 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSSSEEEEECT-----------------TSCEEEEETTTCCEEEEECCSCSSCCCCCCE
T ss_pred ecccccccccccCceEEEEECCCCCEEEEEEC-----------------CCCEEEEECCCCceEEEEecccCCCCCceEE
Confidence 322111 111234678999999988777543 4789999987665443221 1223467
Q ss_pred EEEccCCCEEEEEeCCCCeEEEEEecC
Q 017317 223 VALSKDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 223 i~~~~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
++++|||+ .+++...++.|..+++.+
T Consensus 350 l~~s~dg~-~l~sgs~D~~i~iW~~~~ 375 (380)
T 3iz6_a 350 LGLSSDGS-ALCTGSWDKNLKIWAFSG 375 (380)
T ss_dssp EEECSSSS-EEEEECTTSCEEEEECCS
T ss_pred EEECCCCC-EEEEeeCCCCEEEEecCC
Confidence 99999999 555666677888887665
No 254
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.91 E-value=0.0025 Score=57.48 Aligned_cols=99 Identities=11% Similarity=0.062 Sum_probs=60.3
Q ss_pred cCCcCCcceEEEecC---CC-EEEEecCCeEEEEEc-C-Cce--EEeeeecCccccCeEECCCCcEE-EEECCCcEEEEe
Q 017317 73 EGILNGPEDVCVDRN---GV-LYTATRDGWIKRLHK-N-GTW--ENWKLIGGDTLLGITTTQENEIL-VCDADKGLLKVT 143 (373)
Q Consensus 73 ~g~~~~P~~ia~d~~---G~-l~v~~~~g~I~~~~~-~-g~~--~~~~~~~~~p~~gl~~d~~g~L~-va~~~~gl~~~~ 143 (373)
.+.-..-.++++.++ |. |.+++.+|.|..++. + +.. ..+....+... .+++.++++++ .+...+.+..++
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL-DVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEE-EEEECcCCCEEEEEcCCCcEEEEE
Confidence 333455678999987 45 447788999999983 3 433 22333344556 89999999755 455545566677
Q ss_pred -cCC-cEEEeeccCCccccccceeEE--cCCCcEEEEe
Q 017317 144 -EEG-VTVLASHVNGSRINLADDLIA--ATDGSIYFSV 177 (373)
Q Consensus 144 -~~g-~~~l~~~~~~~~~~~~~~l~~--~~dG~l~v~~ 177 (373)
.++ ...+... ...+..+++ .++|.++++.
T Consensus 115 ~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~l~~~ 147 (368)
T 3mmy_A 115 LSSNQAIQIAQH-----DAPVKTIHWIKAPNYSCVMTG 147 (368)
T ss_dssp TTTTEEEEEEEC-----SSCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCceeeccc-----cCceEEEEEEeCCCCCEEEEc
Confidence 556 3332221 124567777 7788655543
No 255
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.89 E-value=0.0013 Score=59.70 Aligned_cols=145 Identities=8% Similarity=0.034 Sum_probs=79.4
Q ss_pred ccccCeEECCCCcEEEE-ECCCcEEEEe-cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCcccccccccccccc
Q 017317 117 DTLLGITTTQENEILVC-DADKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLE 193 (373)
Q Consensus 117 ~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~ 193 (373)
... .+++.++|++.++ ...+.|..++ .++ .........+ ....+..+++.|+|++.++.+.
T Consensus 18 ~v~-~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~-h~~~v~~~~~sp~g~~l~s~s~-------------- 81 (345)
T 3fm0_A 18 RCW-FLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEG-HQRTVRKVAWSPCGNYLASASF-------------- 81 (345)
T ss_dssp CEE-EEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSS-CSSCEEEEEECTTSSEEEEEET--------------
T ss_pred cEE-EEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccc-cCCcEEEEEECCCCCEEEEEEC--------------
Confidence 345 7899999986654 4444566666 444 2211111111 1235788999999987766432
Q ss_pred ccCCceEEEEeCCCCeEE--EeecC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCcee
Q 017317 194 AKPHGKLLKYDPSLNETS--ILLDS-LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIK 270 (373)
Q Consensus 194 ~~~~g~l~~~d~~~~~~~--~~~~~-~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~ 270 (373)
.+.+..+|..++..+ ....+ ......++|+|+++.|+ +...++.|..+++..............-......++
T Consensus 82 ---D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~-s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 82 ---DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLA-TCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp ---TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEE-EEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEE
T ss_pred ---CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEE-EEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEE
Confidence 244555554434322 22222 23457899999999544 444567788888764322111111111122345577
Q ss_pred ECCCCCEEEEE
Q 017317 271 LAPDGSFWIAI 281 (373)
Q Consensus 271 ~d~dG~lwva~ 281 (373)
+.++|++.++.
T Consensus 158 ~~p~~~~l~s~ 168 (345)
T 3fm0_A 158 WHPSQELLASA 168 (345)
T ss_dssp ECSSSSCEEEE
T ss_pred ECCCCCEEEEE
Confidence 88888755443
No 256
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.89 E-value=0.00094 Score=67.66 Aligned_cols=185 Identities=17% Similarity=0.155 Sum_probs=104.8
Q ss_pred CCcceEEEecCCC-EEEEecCCeEEEEEcC-CceEE---eeeecCccccCeEECCC--CcEE-EEECCCcEEEEe-cCC-
Q 017317 77 NGPEDVCVDRNGV-LYTATRDGWIKRLHKN-GTWEN---WKLIGGDTLLGITTTQE--NEIL-VCDADKGLLKVT-EEG- 146 (373)
Q Consensus 77 ~~P~~ia~d~~G~-l~v~~~~g~I~~~~~~-g~~~~---~~~~~~~p~~gl~~d~~--g~L~-va~~~~gl~~~~-~~g- 146 (373)
....++++.++|. |.+++.+|.|..++.. +.... +....+... ++++.++ ++++ .+...+.|..++ .++
T Consensus 10 ~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~-~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~ 88 (753)
T 3jro_A 10 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENGR 88 (753)
T ss_dssp CCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEE-EEEECCTTSCSEEEEEETTSCEEEEEEETTE
T ss_pred ceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceE-EEEecCCCCCCEEEEEeCCCeEEEEECCCCc
Confidence 3456677777776 5577789999999832 32222 222223445 8888766 7654 455545577777 555
Q ss_pred cEEEeeccCCccccccceeEEcCC--CcEEEEeCCccccccccccccccccCCceEEEEeCCCCe---EEEeecCCCCcc
Q 017317 147 VTVLASHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE---TSILLDSLFFAN 221 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~d--G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~~~~~~~ 221 (373)
...+... .+ ....+..+++.++ |.+.++.+. .|.|..+|..++. ............
T Consensus 89 ~~~~~~~-~~-h~~~V~~v~~sp~~~~~~l~sgs~-----------------dg~I~vwdl~~~~~~~~~~~~~~~~~v~ 149 (753)
T 3jro_A 89 WSQIAVH-AV-HSASVNSVQWAPHEYGPLLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGVN 149 (753)
T ss_dssp EEEEEEE-CC-CSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEECCSSSCCCCEEEECCSSCEE
T ss_pred ccccccc-cC-CCCCeEEEEECCCCCCCEEEEEeC-----------------CCcEEEEEeecCCCcceeEeecCCCceE
Confidence 3333221 11 1235778999998 876665432 4778888876552 222222233456
Q ss_pred eEEEcc-------------CCCEEEEEeCCCCeEEEEEecCCCCc-ceeEEecCCCCCCCceeECCC---CCEEEEEe
Q 017317 222 GVALSK-------------DEDYLVVCETFKFRCLKYWLKGESKE-QTEIFVENLPGGPDNIKLAPD---GSFWIAIL 282 (373)
Q Consensus 222 gi~~~~-------------dg~~l~v~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~g~p~~i~~d~d---G~lwva~~ 282 (373)
.++++| +++.++.+ ..++.|..|++...... ........-.+....+++.++ |++.++..
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sg-s~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTG-GADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEE-ETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEecCcccccccccccCCCCCEEEEE-ECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 788888 47745444 45677888887653221 111111112234556788888 66555543
No 257
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.88 E-value=0.015 Score=57.03 Aligned_cols=42 Identities=17% Similarity=0.207 Sum_probs=27.1
Q ss_pred cEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCC
Q 017317 318 KAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLN 361 (373)
Q Consensus 318 ~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~ 361 (373)
.+.+..+| .+|+.+..+..+.+.....++ . ..+|++|++...
T Consensus 493 dg~l~A~D~~tG~~lW~~~l~~g~~~~P~~-y-~~~G~qyv~~~~ 535 (599)
T 1w6s_A 493 DGYLKARDSDTGDLLWKFKIPSGAIGYPMT-Y-THKGTQYVAIYY 535 (599)
T ss_dssp TSEEEEEETTTCCEEEEEECSSCCCSCCEE-E-EETTEEEEEEEE
T ss_pred CCeEEEEECCCCCEEEEeeCCCCcEeccEE-E-EeCCEEEEEEEc
Confidence 34678888 569999888776654322222 1 357888886543
No 258
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.003 Score=57.22 Aligned_cols=185 Identities=11% Similarity=0.115 Sum_probs=101.7
Q ss_pred CcceEEEecC--CCE-EEEecCCeEEEEE-cCCceEEe---eeecCccccCeEECCC--CcEE-EEECCCcEEEEe-cCC
Q 017317 78 GPEDVCVDRN--GVL-YTATRDGWIKRLH-KNGTWENW---KLIGGDTLLGITTTQE--NEIL-VCDADKGLLKVT-EEG 146 (373)
Q Consensus 78 ~P~~ia~d~~--G~l-~v~~~~g~I~~~~-~~g~~~~~---~~~~~~p~~gl~~d~~--g~L~-va~~~~gl~~~~-~~g 146 (373)
...++++.++ +.+ ++++.+|.|..++ .+++.... ........ .+++.++ +.++ ++...+.+..++ .++
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceE-EEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 3466777644 554 4777899999998 45542222 22233455 8899888 7654 555555566677 433
Q ss_pred --cEEEeeccCCccccccceeEEcC-------------CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe--
Q 017317 147 --VTVLASHVNGSRINLADDLIAAT-------------DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE-- 209 (373)
Q Consensus 147 --~~~l~~~~~~~~~~~~~~l~~~~-------------dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~-- 209 (373)
........ ....+..+++.+ ++.+.++.+. .+.|..+|..+++
T Consensus 136 ~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 136 GTTSPIIIDA---HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------DNLVKIWKYNSDAQT 195 (379)
T ss_dssp SCCCEEEEEC---CTTCEEEEEECCCC----------CTTCEEEEEET-----------------TSCEEEEEEETTTTE
T ss_pred CceeeEEecC---CCCceEEEEEcCccccccccccCCCCCCEEEEEeC-----------------CCeEEEEEecCCCcc
Confidence 22211111 112467888888 5766555432 3566666654332
Q ss_pred EEE--eec-CCCCcceEEEccC---CCEEEEEeCCCCeEEEEEecCCCCcceeEEecC--CCCCCCceeECCCCCEEE-E
Q 017317 210 TSI--LLD-SLFFANGVALSKD---EDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDNIKLAPDGSFWI-A 280 (373)
Q Consensus 210 ~~~--~~~-~~~~~~gi~~~~d---g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~dG~lwv-a 280 (373)
... ... .......++++|+ ++ ++++...++.|..|++.............. .......++++++|++.+ +
T Consensus 196 ~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 274 (379)
T 3jrp_A 196 YVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 274 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred eeeEEEEecccCcEeEEEECCCCCCCC-eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEe
Confidence 111 112 2234568999999 66 455555667788888765322111122111 223345577888887544 4
Q ss_pred EecC
Q 017317 281 ILQL 284 (373)
Q Consensus 281 ~~~~ 284 (373)
...+
T Consensus 275 ~~dg 278 (379)
T 3jrp_A 275 GGDN 278 (379)
T ss_dssp ESSS
T ss_pred cCCC
Confidence 4444
No 259
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=97.87 E-value=0.018 Score=53.98 Aligned_cols=152 Identities=13% Similarity=0.117 Sum_probs=87.0
Q ss_pred cCCcceEEEecCCCEEEEecCCeEEEEE-cCCceEE-eeeecCccccCeEEC--CCCc-EEEEECCCcEEEEe-cCC--c
Q 017317 76 LNGPEDVCVDRNGVLYTATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTT--QENE-ILVCDADKGLLKVT-EEG--V 147 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~-~~~~~~~p~~gl~~d--~~g~-L~va~~~~gl~~~~-~~g--~ 147 (373)
-....++++.+++.+.+++.+|.|..++ .+++... +........ .+++. +++. ++.+...+.+..++ .++ .
T Consensus 162 ~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 162 DGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR-CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp SSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEEESSSCEEEEEEETTSCEEEEECCCCCCC
T ss_pred CcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccE-EEEEecCCCCCEEEEEcCCCcEEEeeCCCCccc
Confidence 3446678888888777888999999999 4554332 222233344 66665 4655 44555555566677 443 2
Q ss_pred EEEee-------------------ccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCC
Q 017317 148 TVLAS-------------------HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN 208 (373)
Q Consensus 148 ~~l~~-------------------~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 208 (373)
..... ...+ +...-..+.++|.+.++.+ ..+.|..+|..++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~l~~~~-----------------~d~~i~vwd~~~~ 300 (464)
T 3v7d_B 241 PDHGEEHDYPLVFHTPEENPYFVGVLRG---HMASVRTVSGHGNIVVSGS-----------------YDNTLIVWDVAQM 300 (464)
T ss_dssp ------CCSSEEESCGGGCTTEEEEECC---CSSCEEEEEEETTEEEEEE-----------------TTSCEEEEETTTT
T ss_pred ccccccCCcceEeeccCCCeEEEEEccC---ccceEEEEcCCCCEEEEEe-----------------CCCeEEEEECCCC
Confidence 11100 0000 0111123345565444432 2478888998777
Q ss_pred eEEEeecC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEecC
Q 017317 209 ETSILLDS-LFFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 209 ~~~~~~~~-~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
+......+ ......++++++++.++.+ ..++.|..|++..
T Consensus 301 ~~~~~~~~~~~~v~~~~~~~~~~~l~sg-~~dg~i~vwd~~~ 341 (464)
T 3v7d_B 301 KCLYILSGHTDRIYSTIYDHERKRCISA-SMDTTIRIWDLEN 341 (464)
T ss_dssp EEEEEECCCSSCEEEEEEETTTTEEEEE-ETTSCEEEEETTT
T ss_pred cEEEEecCCCCCEEEEEEcCCCCEEEEE-eCCCcEEEEECCC
Confidence 65443332 3345678999999965555 4566788898753
No 260
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.84 E-value=0.0011 Score=61.18 Aligned_cols=152 Identities=11% Similarity=0.081 Sum_probs=96.5
Q ss_pred CCcceEEEecC-CCEE-EEecCCeEEEEE-cCCceEEeeee-------cCccccCeEECCCC-cEEE-EECCC---cEEE
Q 017317 77 NGPEDVCVDRN-GVLY-TATRDGWIKRLH-KNGTWENWKLI-------GGDTLLGITTTQEN-EILV-CDADK---GLLK 141 (373)
Q Consensus 77 ~~P~~ia~d~~-G~l~-v~~~~g~I~~~~-~~g~~~~~~~~-------~~~p~~gl~~d~~g-~L~v-a~~~~---gl~~ 141 (373)
....++++.++ +.++ ++..+|.|..++ ..++....... ..... .+++.++| .+++ +.... .+..
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~d~~~~~i~~ 244 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLS-VVEWHPKNSTRVATATGSDNDPSILI 244 (416)
T ss_dssp CCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEE-EEEECSSCTTEEEEEECCSSSCCCCE
T ss_pred CCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceE-EEEECCCCCCEEEEEECCCCCceEEE
Confidence 34567899887 5655 667889999999 44443222222 23355 89999987 4444 44433 5777
Q ss_pred Ee-cCC---cEEEeeccCCccccccceeEEcC-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec-
Q 017317 142 VT-EEG---VTVLASHVNGSRINLADDLIAAT-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD- 215 (373)
Q Consensus 142 ~~-~~g---~~~l~~~~~~~~~~~~~~l~~~~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~- 215 (373)
++ .++ ...+. .+ ....+..+++.+ +|.++++.+. .+.|..+|..+++......
T Consensus 245 ~d~~~~~~~~~~~~---~~-~~~~v~~~~~s~~~~~~l~s~~~-----------------dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 245 WDLRNANTPLQTLN---QG-HQKGILSLDWCHQDEHLLLSSGR-----------------DNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp EETTSTTSCSBCCC---SC-CSSCEEEEEECSSCSSCEEEEES-----------------SSEEEEECSSSCCEEEEEEC
T ss_pred EeCCCCCCCcEEee---cC-ccCceeEEEeCCCCCCeEEEEeC-----------------CCCEEEeeCCCCccceeecC
Confidence 77 443 22221 01 123567899998 7876665432 4788889987766443332
Q ss_pred CCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCC
Q 017317 216 SLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (373)
Q Consensus 216 ~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~ 250 (373)
.......++|+|++..++++...++.|..|++...
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~ 338 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNL 338 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCC
T ss_pred CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCC
Confidence 23445789999999447777777888999987643
No 261
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.84 E-value=0.00048 Score=72.45 Aligned_cols=177 Identities=7% Similarity=-0.010 Sum_probs=108.3
Q ss_pred CcceEEEe-cCCCEEEEecCCeEEEEEc-CCceEEeeeecC-ccccCeEECCCCc-EEEEECCCcEE-EEe-cCC-cEEE
Q 017317 78 GPEDVCVD-RNGVLYTATRDGWIKRLHK-NGTWENWKLIGG-DTLLGITTTQENE-ILVCDADKGLL-KVT-EEG-VTVL 150 (373)
Q Consensus 78 ~P~~ia~d-~~G~l~v~~~~g~I~~~~~-~g~~~~~~~~~~-~p~~gl~~d~~g~-L~va~~~~gl~-~~~-~~g-~~~l 150 (373)
...++++. ++|...+...++.|+.++. .++...+....+ ... .+++. +|+ |+.+.....++ .++ ..+ .+.+
T Consensus 297 ~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l 374 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYV-RRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKF 374 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEECSCCSCEEEE-EECSS-SEEEEEEEETTEEEEEEEETTTCCEEEC
T ss_pred ccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEEccCCCcceEE-eeeEc-CCCeEEEEECCCceEEEEECCCCCceEe
Confidence 36789999 9887443333788988884 444444333333 445 67777 775 55544445677 677 445 4443
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCC-CCcceEEEccCC
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL-FFANGVALSKDE 229 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~-~~~~gi~~~~dg 229 (373)
. . ....+..++++|||+..+.... .+.|+.+|.++++...+.... .....++|+|||
T Consensus 375 ~-~----~~~~~~~~~~SpDG~~la~~~~-----------------~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG 432 (1045)
T 1k32_A 375 E-E----NLGNVFAMGVDRNGKFAVVAND-----------------RFEIMTVDLETGKPTVIERSREAMITDFTISDNS 432 (1045)
T ss_dssp C-C----CCCSEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTCCEEEEEECSSSCCCCEEECTTS
T ss_pred c-C----CccceeeeEECCCCCEEEEECC-----------------CCeEEEEECCCCceEEeccCCCCCccceEECCCC
Confidence 2 1 1134678899999964443221 368999999888877665333 334789999999
Q ss_pred CEEEEEeCCC---------CeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEe
Q 017317 230 DYLVVCETFK---------FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAIL 282 (373)
Q Consensus 230 ~~l~v~~~~~---------~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~ 282 (373)
+++.++.... ..|+.+++.+.+ ...+. ........+++++||+ |++++.
T Consensus 433 ~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~~l~-~~~~~~~~~~~spdG~~l~~~s~ 491 (1045)
T 1k32_A 433 RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IFAAT-TENSHDYAPAFDADSKNLYYLSY 491 (1045)
T ss_dssp CEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EEECS-CSSSBEEEEEECTTSCEEEEEES
T ss_pred CeEEEEecCccccccCCCCCeEEEEECCCCc---EEEee-CCCcccCCceEcCCCCEEEEEec
Confidence 9887765422 478888876532 22221 1112234577899997 555554
No 262
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.83 E-value=0.00025 Score=71.19 Aligned_cols=129 Identities=9% Similarity=-0.036 Sum_probs=81.3
Q ss_pred ceEEEecCCCEEEEecCCeEEEEE-cCCceEEeeeecC----ccccCeEECCCCcEE-EEEC---------CCcEEEEe-
Q 017317 80 EDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGG----DTLLGITTTQENEIL-VCDA---------DKGLLKVT- 143 (373)
Q Consensus 80 ~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~----~p~~gl~~d~~g~L~-va~~---------~~gl~~~~- 143 (373)
.++.+.++|.++....++.|+.++ .+|+.+.+..... ... .+++.+||+.. ++.. ...++.++
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~ 97 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNAS-NYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDL 97 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCS-EEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcccccccccee-eEEECCCCCeEEEEecCceeEEeecceEEEEEEC
Confidence 356777788766666788999999 4555544433221 145 78899999743 3332 13466677
Q ss_pred cCC-c---EEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCC-
Q 017317 144 EEG-V---TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL- 217 (373)
Q Consensus 144 ~~g-~---~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~- 217 (373)
.+| . ..+ . ..+..+++.|||+ |.++. .+.|+.++..+++...+....
T Consensus 98 ~~g~~~~~~~l----~----~~~~~~~~SPDG~~la~~~-------------------~~~i~~~~~~~g~~~~l~~~~~ 150 (719)
T 1z68_A 98 SNGEFVRGNEL----P----RPIQYLCWSPVGSKLAYVY-------------------QNNIYLKQRPGDPPFQITFNGR 150 (719)
T ss_dssp TTTEECCSSCC----C----SSBCCEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCCCCB
T ss_pred CCCccccceec----C----cccccceECCCCCEEEEEE-------------------CCeEEEEeCCCCCcEEEecCCC
Confidence 555 3 222 1 2356789999995 54442 257888988777655443111
Q ss_pred ------------------CCcceEEEccCCCEEEEEe
Q 017317 218 ------------------FFANGVALSKDEDYLVVCE 236 (373)
Q Consensus 218 ------------------~~~~gi~~~~dg~~l~v~~ 236 (373)
....+++|+|||+.|+++.
T Consensus 151 ~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 151 ENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp TTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred cCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 1124799999999888765
No 263
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.81 E-value=0.002 Score=60.43 Aligned_cols=184 Identities=10% Similarity=0.007 Sum_probs=111.5
Q ss_pred CCcceEEEecCCC--EEEEecCCeEEEEEcCC-c--------eEEeeeecCccccCeEECC-CCcEEEE-ECCCcEEEEe
Q 017317 77 NGPEDVCVDRNGV--LYTATRDGWIKRLHKNG-T--------WENWKLIGGDTLLGITTTQ-ENEILVC-DADKGLLKVT 143 (373)
Q Consensus 77 ~~P~~ia~d~~G~--l~v~~~~g~I~~~~~~g-~--------~~~~~~~~~~p~~gl~~d~-~g~L~va-~~~~gl~~~~ 143 (373)
....++++.+++. |.++..+|.|..++... . ...+........ .+++.+ ++.++++ ...+.|..++
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~s~~~dg~i~i~d 260 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVE-DVAWHLLHESLFGSVADDQKLMIWD 260 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEE-EEEECSSCTTEEEEEETTSEEEEEE
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEe-eeEEeCCCCCEEEEEeCCCeEEEEE
Confidence 3467899988665 55778899999999322 1 112222233456 889988 5566654 4444566677
Q ss_pred -cCC-----cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCC-e-EEEee
Q 017317 144 -EEG-----VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-E-TSILL 214 (373)
Q Consensus 144 -~~g-----~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~-~~~~~ 214 (373)
.++ ...+.. ....++.+++.++|. ++++.+. .|.|..+|..+. + ...+.
T Consensus 261 ~~~~~~~~~~~~~~~-----~~~~v~~i~~~p~~~~~l~tg~~-----------------dg~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 261 TRNNNTSKPSHTVDA-----HTAEVNCLSFNPYSEFILATGSA-----------------DKTVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp TTCSCSSSCSEEEEC-----CSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEETTCTTSCSEEEE
T ss_pred CCCCCCCcceeEeec-----CCCCeEEEEeCCCCCCEEEEEeC-----------------CCeEEEEeCCCCCCCeEEee
Confidence 432 222211 123578999999985 6665432 477888887652 2 23333
Q ss_pred cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcc----------eeEEe-cCCCCCCCceeECCCCC-EEEEEe
Q 017317 215 DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQ----------TEIFV-ENLPGGPDNIKLAPDGS-FWIAIL 282 (373)
Q Consensus 215 ~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~----------~~~~~-~~~~g~p~~i~~d~dG~-lwva~~ 282 (373)
........++|+|+++.++++....+.|..|++....... ...+. ......+..++++++|. +.++..
T Consensus 319 ~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s 398 (430)
T 2xyi_A 319 SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS 398 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE
T ss_pred cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE
Confidence 3334457899999998788888778889999976421100 11111 11123467788999998 665554
Q ss_pred c
Q 017317 283 Q 283 (373)
Q Consensus 283 ~ 283 (373)
.
T Consensus 399 ~ 399 (430)
T 2xyi_A 399 E 399 (430)
T ss_dssp T
T ss_pred C
Confidence 3
No 264
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.80 E-value=0.0007 Score=56.95 Aligned_cols=141 Identities=11% Similarity=0.009 Sum_probs=80.4
Q ss_pred ccccCeEECCCCcEEEEECCCcEEEEe-cCC-cEEE---eeccCCccccccceeEEcCCCcEEEEeCCcccccccccccc
Q 017317 117 DTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVL---ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDL 191 (373)
Q Consensus 117 ~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l---~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~ 191 (373)
+.. .|+++++|.||+. ....|++.+ .++ -+.. ...+.....+.-.++.+|++|.||+..
T Consensus 42 ~~~-~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~-------------- 105 (236)
T 1tl2_A 42 NFK-FLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS-------------- 105 (236)
T ss_dssp TCS-EEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE--------------
T ss_pred cce-eEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeC--------------
Confidence 345 7999999999998 445689988 452 1111 111111122234688999999999983
Q ss_pred ccccCCceEEEEeCCCCe-E------EEeec-CCCCcceEEEccCCCEEEEEeCCCCeEEEEEec-CCCCc---ceeEEe
Q 017317 192 LEAKPHGKLLKYDPSLNE-T------SILLD-SLFFANGVALSKDEDYLVVCETFKFRCLKYWLK-GESKE---QTEIFV 259 (373)
Q Consensus 192 ~~~~~~g~l~~~d~~~~~-~------~~~~~-~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~-~~~~~---~~~~~~ 259 (373)
+|.|||+++-+.. - ..+.. +-..-.-|.++|+|. ||.+. +.++++-... +.... ....+.
T Consensus 106 -----dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g 177 (236)
T 1tl2_A 106 -----KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH--GQQFYKALPPVSNQDNWLARATKIG 177 (236)
T ss_dssp -----TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE--TTEEEEECCCSSTTCCHHHHCEEEE
T ss_pred -----CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe--CCcEEecCCCCCCCcccccccceec
Confidence 2799999974321 1 11111 222336788999998 89887 4567663321 11111 111111
Q ss_pred cCCCCCCCceeECCCCCEEEEE
Q 017317 260 ENLPGGPDNIKLAPDGSFWIAI 281 (373)
Q Consensus 260 ~~~~g~p~~i~~d~dG~lwva~ 281 (373)
...-..-.-+.++++|+||...
T Consensus 178 ~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 178 QGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp SSSGGGEEEEEECTTSCEEEEE
T ss_pred cCCcceEEEEEECCCCcEEEEe
Confidence 0000011115588999999988
No 265
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.80 E-value=0.0047 Score=61.70 Aligned_cols=111 Identities=12% Similarity=0.168 Sum_probs=66.0
Q ss_pred CCCEEEEecCCeEEEEE-cCCceEEeeeecC------------ccccCeEECCCCcEEEEECCCcEEEEe-cCC-cEEEe
Q 017317 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIGG------------DTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLA 151 (373)
Q Consensus 87 ~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~------------~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l~ 151 (373)
+|.||+++.++.|+.+| .+|+..-...... ... +++++ +++||+++....|+.+| .+| ...-.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~a~~-~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNR-GVALW-KGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCC-CCEEE-TTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCC-CceEE-CCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 79999999889999999 5776432211111 113 56664 67899998777799999 788 43322
Q ss_pred ecc-CCcc-ccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE
Q 017317 152 SHV-NGSR-INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (373)
Q Consensus 152 ~~~-~~~~-~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 212 (373)
... .... ........+. +|.+|++....++ ...+.|+.+|..+++...
T Consensus 155 ~~~~~~~~~~~~~~~p~v~-~~~v~v~~~~~~~------------~~~g~v~a~D~~tG~~~W 204 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVF-KGKVIIGNGGAEY------------GVRGYITAYDAETGERKW 204 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEE-TTEEEECCBCTTT------------CCBCEEEEEETTTCCEEE
T ss_pred cCCcCcCcCcccccCcEEE-CCEEEEEeccccc------------CCCCEEEEEECCCCcEEE
Confidence 211 1000 0111122232 6789998653111 124789999988887553
No 266
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.79 E-value=0.0032 Score=56.99 Aligned_cols=179 Identities=12% Similarity=0.128 Sum_probs=97.1
Q ss_pred ecCCCEEEEe-cCCeEEEEEcCCceEEeeeecCccccCeEECC----CC----cEEEEECC---CcE--EEEe-cCC-cE
Q 017317 85 DRNGVLYTAT-RDGWIKRLHKNGTWENWKLIGGDTLLGITTTQ----EN----EILVCDAD---KGL--LKVT-EEG-VT 148 (373)
Q Consensus 85 d~~G~l~v~~-~~g~I~~~~~~g~~~~~~~~~~~p~~gl~~d~----~g----~L~va~~~---~gl--~~~~-~~g-~~ 148 (373)
|+...+++++ ..++++.++.+|+...... .++++ ++.+.+ .| .+++++.. +.| +.++ .++ ++
T Consensus 37 dp~~s~ii~t~k~~gL~Vydl~G~~l~~~~-~g~~n-nVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~ 114 (355)
T 3amr_A 37 TPQNSKLITTNKKSGLVVYSLDGKMLHSYN-TGKLN-NVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQ 114 (355)
T ss_dssp CGGGCEEEEEETTTEEEEEETTSCEEEEEC-CSCEE-EEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEE
T ss_pred CCCccEEEEEcCCCCEEEEcCCCcEEEEcc-CCCcc-cEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCcee
Confidence 3455566665 5678999998887655432 25555 554432 12 23555654 334 4445 344 44
Q ss_pred EEeec--cCCccccccceeEE--cCC-Cc--EEEEeCCccccccccccccccccCCceEEEEeC---CCCeEE----Eee
Q 017317 149 VLASH--VNGSRINLADDLIA--ATD-GS--IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDP---SLNETS----ILL 214 (373)
Q Consensus 149 ~l~~~--~~~~~~~~~~~l~~--~~d-G~--l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~---~~~~~~----~~~ 214 (373)
.+... ..+.....+.+|+. +++ |. +|+++. .|.+..|+. ..++.. .-+
T Consensus 115 ~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k------------------~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 115 SMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK------------------EGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp ECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS------------------SSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred eccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC------------------CCeEEEEEEEeCCCCcccceEEEEe
Confidence 44221 00122356788887 764 54 555543 255554332 223221 112
Q ss_pred cCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEE--e--cCCCCCCCceeE--CCCCC-EEEEEecC
Q 017317 215 DSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIF--V--ENLPGGPDNIKL--APDGS-FWIAILQL 284 (373)
Q Consensus 215 ~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~--~--~~~~g~p~~i~~--d~dG~-lwva~~~~ 284 (373)
.....+.|++.++....||+++.. .+|++|+.+.....+.... . ..+..-+.||++ .++|+ +++++..+
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred cCCCCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 334578899999988889999986 5799999653321111111 1 122234678887 45554 55555443
No 267
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.79 E-value=0.025 Score=52.90 Aligned_cols=136 Identities=13% Similarity=0.050 Sum_probs=70.5
Q ss_pred CceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC--CCCCCCceeECCC
Q 017317 197 HGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN--LPGGPDNIKLAPD 274 (373)
Q Consensus 197 ~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~g~p~~i~~d~d 274 (373)
.+.|..+|..+++......... ..-.++..+++.++ +...++.|..|++...+ ....+... ..+....+++ +
T Consensus 298 d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~~~l~-~~~~dg~i~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~--~ 371 (445)
T 2ovr_B 298 DTSIRVWDVETGNCIHTLTGHQ-SLTSGMELKDNILV-SGNADSTVKIWDIKTGQ--CLQTLQGPNKHQSAVTCLQF--N 371 (445)
T ss_dssp TSCEEEEETTTCCEEEEECCCC-SCEEEEEEETTEEE-EEETTSCEEEEETTTCC--EEEEECSTTSCSSCEEEEEE--C
T ss_pred CCeEEEEECCCCCEEEEEcCCc-ccEEEEEEeCCEEE-EEeCCCeEEEEECCCCc--EEEEEccCCCCCCCEEEEEE--C
Confidence 4678888887766543333221 12233445666444 44456788889875432 12222210 1122333455 3
Q ss_pred CCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCC-CCceecceeEEEEeC
Q 017317 275 GSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDP-NGKVMSFVTSALEFD 352 (373)
Q Consensus 275 G~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~-~g~~~~~~~~~~~~~ 352 (373)
+++.++.... +.+..++ .+|+.+..+... .+.....+..+...+
T Consensus 372 ~~~l~s~~~d----------------------------------g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 417 (445)
T 2ovr_B 372 KNFVITSSDD----------------------------------GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASN 417 (445)
T ss_dssp SSEEEEEETT----------------------------------SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECS
T ss_pred CCEEEEEeCC----------------------------------CeEEEEECCCCceeeeeeccccCCCCceEEEEEecC
Confidence 5554443322 2466677 567877777321 122234577777775
Q ss_pred CE--EEEeeCCCC---eEEEeeCCC
Q 017317 353 DH--LYLGSLNTN---FIGKLPLKA 372 (373)
Q Consensus 353 g~--L~vgs~~~~---~i~~~~l~~ 372 (373)
+. |..|+..+. +|..+++..
T Consensus 418 ~~~~la~~~~dg~~~~~l~v~df~~ 442 (445)
T 2ovr_B 418 TKLVCAVGSRNGTEETKLLVLDFDV 442 (445)
T ss_dssp SEEEEEEECSSSSSCCEEEEEECCC
T ss_pred CEEEEEEcccCCCCccEEEEEECCC
Confidence 43 445554443 588887764
No 268
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.77 E-value=0.0001 Score=68.16 Aligned_cols=140 Identities=16% Similarity=0.163 Sum_probs=60.6
Q ss_pred EEecCCCEEEEecCCeEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEE-ECCCcEEEEe-cCC-cE-EEeeccCCc
Q 017317 83 CVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVC-DADKGLLKVT-EEG-VT-VLASHVNGS 157 (373)
Q Consensus 83 a~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~g-~~-~l~~~~~~~ 157 (373)
+++ ++.+|+++.+|.|+.+| .+|+....... +... +..+..+|.+|++ ...+.++.+| .+| .. .........
T Consensus 6 ~v~-~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~-s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~ 82 (369)
T 2hz6_A 6 TLP-ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVL-QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPEL 82 (369)
T ss_dssp --C-TTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSC-CCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHH
T ss_pred eee-CCEEEEEcCCCEEEEEECCCCCEEEEecC-CCce-ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccc
Confidence 554 78999999999999999 67865432222 3333 3333356777776 3445688888 567 32 221110000
Q ss_pred cccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeC
Q 017317 158 RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCET 237 (373)
Q Consensus 158 ~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~ 237 (373)
. ....++..++.+|++.. .+.|+.+|.++|+...... ......++++++.+|++.
T Consensus 83 -~--~~sp~~~~~~~v~~g~~------------------dg~v~a~D~~tG~~~w~~~---~~~~~~~~p~~~~v~~~~- 137 (369)
T 2hz6_A 83 -V--QASPCRSSDGILYMGKK------------------QDIWYVIDLLTGEKQQTLS---SAFADSLSPSTSLLYLGR- 137 (369)
T ss_dssp -H--TTCSCC-----CCCCEE------------------EEEEEEECCC-------------------------EEEEE-
T ss_pred -c--ccCceEecCCEEEEEeC------------------CCEEEEEECCCCcEEEEec---CCCcccccccCCEEEEEe-
Confidence 0 01112223567777643 3689999998887543221 112244556777677764
Q ss_pred CCCeEEEEEecCC
Q 017317 238 FKFRCLKYWLKGE 250 (373)
Q Consensus 238 ~~~~i~~~~~~~~ 250 (373)
.++.|+.++....
T Consensus 138 ~dg~v~a~d~~tG 150 (369)
T 2hz6_A 138 TEYTITMYDTKTR 150 (369)
T ss_dssp EEEEEECCCSSSS
T ss_pred cCCEEEEEECCCC
Confidence 3457888886543
No 269
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.77 E-value=0.019 Score=51.06 Aligned_cols=185 Identities=11% Similarity=0.031 Sum_probs=100.2
Q ss_pred cCCcCCcceEEEecC-CCEE-EEecCCeEEEEEc-CCc------eEEeeeecCccccCeEECCCCcEEEE-ECCCcEEEE
Q 017317 73 EGILNGPEDVCVDRN-GVLY-TATRDGWIKRLHK-NGT------WENWKLIGGDTLLGITTTQENEILVC-DADKGLLKV 142 (373)
Q Consensus 73 ~g~~~~P~~ia~d~~-G~l~-v~~~~g~I~~~~~-~g~------~~~~~~~~~~p~~gl~~d~~g~L~va-~~~~gl~~~ 142 (373)
.|--..-.+|++.|+ +++. .++.++.|..++. .++ ...+........ .+++.++|++.++ .....+..+
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~-~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS-DVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEE-EEEECCCCCEEEEEcccccceEE
Confidence 344455678999985 5655 6778999998882 221 111111223455 8899999986554 444445555
Q ss_pred e-cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cC-CC
Q 017317 143 T-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DS-LF 218 (373)
Q Consensus 143 ~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~-~~ 218 (373)
+ ..+ ........ ......+.+.+++...++.+. .+.+..+|.......... .. ..
T Consensus 114 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~s~s~-----------------d~~~~~~d~~~~~~~~~~~~~~~~ 172 (340)
T 4aow_A 114 DLTTGTTTRRFVGH----TKDVLSVAFSSDNRQIVSGSR-----------------DKTIKLWNTLGVCKYTVQDESHSE 172 (340)
T ss_dssp ETTTTEEEEEEECC----SSCEEEEEECTTSSCEEEEET-----------------TSCEEEECTTSCEEEEECSSSCSS
T ss_pred eecccceeeeecCC----CCceeEEEEeecCccceeecC-----------------CCeEEEEEeCCCceEEEEeccccC
Confidence 5 333 22221111 123445567777765555332 356777776544333221 11 22
Q ss_pred CcceEEEccCCCE-EEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 219 FANGVALSKDEDY-LVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 219 ~~~gi~~~~dg~~-l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
....+++++++.. ++++...+..|..+++.... ....+. .-.+....++++++|++.++..
T Consensus 173 ~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~--~~~~~~-~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 173 WVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCK--LKTNHI-GHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp CEEEEEECSCSSSCEEEEEETTSCEEEEETTTTE--EEEEEC-CCSSCEEEEEECTTSSEEEEEE
T ss_pred cccceEEccCCCCcEEEEEcCCCEEEEEECCCCc--eeeEec-CCCCcEEEEEECCCCCEEEEEe
Confidence 3356777776543 45555556678888765432 111221 2223345678899998766543
No 270
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.74 E-value=0.0039 Score=56.10 Aligned_cols=201 Identities=11% Similarity=-0.010 Sum_probs=103.2
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEE-cCCceEEeeeecCccccCeEE--CCCCcEE-EEECCCcEEEEe-cCC--cE
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLIGGDTLLGITT--TQENEIL-VCDADKGLLKVT-EEG--VT 148 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~--d~~g~L~-va~~~~gl~~~~-~~g--~~ 148 (373)
....++++.++|... +++.+|.|..++ .+++............ .+++ +++++++ .+...+.+..++ .++ ..
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 165 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK-TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM 165 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEEEECSSCEEEEEEETTSEEEEECSSCSSCSE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE-EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEE
Confidence 345678888887654 777899999999 4555444433344556 8888 8888744 455545567777 555 33
Q ss_pred EEeeccCC--ccccccceeEEcCCCcEEEEeCCcccc------------ccc---------cccccccccCCceEEEEeC
Q 017317 149 VLASHVNG--SRINLADDLIAATDGSIYFSVASTKFG------------LHN---------WGLDLLEAKPHGKLLKYDP 205 (373)
Q Consensus 149 ~l~~~~~~--~~~~~~~~l~~~~dG~l~v~~~~~~~~------------~~~---------~~~~~~~~~~~g~l~~~d~ 205 (373)
.+...... .......-+....++.+.+-+...... ... ....+..+...+.|..+|.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~ 245 (368)
T 3mmy_A 166 VLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYI 245 (368)
T ss_dssp EEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEES
T ss_pred EEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEec
Confidence 33211000 000011112222334333322211000 000 0000333444566777776
Q ss_pred CCCeE----EEeecCCC------------CcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCce
Q 017317 206 SLNET----SILLDSLF------------FANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNI 269 (373)
Q Consensus 206 ~~~~~----~~~~~~~~------------~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i 269 (373)
+.... ..+..... ....++++|+++.++.+. .++.|..|++.... ....+. ...+....+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~-~dg~i~iwd~~~~~--~~~~~~-~~~~~v~~~ 321 (368)
T 3mmy_A 246 NPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG-SDGRFSFWDKDART--KLKTSE-QLDQPISAC 321 (368)
T ss_dssp SCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE-TTSCEEEEETTTTE--EEEECC-CCSSCEEEE
T ss_pred CCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc-cCCeEEEEECCCCc--EEEEec-CCCCCceEE
Confidence 54421 11111111 356799999998665554 56778889875421 111111 222345678
Q ss_pred eECCCCCEEEEEe
Q 017317 270 KLAPDGSFWIAIL 282 (373)
Q Consensus 270 ~~d~dG~lwva~~ 282 (373)
+++++|.+.++..
T Consensus 322 ~~s~~g~~l~~~s 334 (368)
T 3mmy_A 322 CFNHNGNIFAYAS 334 (368)
T ss_dssp EECTTSSCEEEEE
T ss_pred EECCCCCeEEEEe
Confidence 8999997655543
No 271
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.71 E-value=0.0055 Score=55.14 Aligned_cols=146 Identities=8% Similarity=0.011 Sum_probs=83.7
Q ss_pred CcceEEEecCCC-EEEEe-cC--C--eEEEEEc-CCceEEeeeecCccccCeEECCCCc-EEEEEC--------------
Q 017317 78 GPEDVCVDRNGV-LYTAT-RD--G--WIKRLHK-NGTWENWKLIGGDTLLGITTTQENE-ILVCDA-------------- 135 (373)
Q Consensus 78 ~P~~ia~d~~G~-l~v~~-~~--g--~I~~~~~-~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~-------------- 135 (373)
...++++.|+|+ |.+.. .. + .|+.++. .|+...+..... .. ++++.+||+ |+++..
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~-~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IR-SLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EE-EEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-cc-ceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 345678888886 43333 22 3 4888884 455444433333 56 889999996 554431
Q ss_pred -------------CCcEEEEe-cCC-c-EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCce
Q 017317 136 -------------DKGLLKVT-EEG-V-TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGK 199 (373)
Q Consensus 136 -------------~~gl~~~~-~~g-~-~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~ 199 (373)
...|+.++ .+| . +.+.. + .+..+++.+|| ++++.....- .. .......
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-----~--~~~~~~~spdg-~~~~~~~~~~-------~~-~~~~~~~ 201 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-----P--RFSSGIWHRDK-IVVNVPHREI-------IP-QYFKFWD 201 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-----E--TTCEEEEETTE-EEEEEECCCS-------SC-CSSCCEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-----C--CcccccCCCCe-EEEEEecccc-------cc-ccccccc
Confidence 13477777 566 4 55432 1 35678899999 7665422000 00 0001357
Q ss_pred EEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCC-------CCeEEEEE
Q 017317 200 LLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETF-------KFRCLKYW 246 (373)
Q Consensus 200 l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~-------~~~i~~~~ 246 (373)
||.+| +++.+.+... . . -..++|||+.++++... ...|+.++
T Consensus 202 l~~~d--~~~~~~l~~~-~-~-~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 250 (347)
T 2gop_A 202 IYIWE--DGKEEKMFEK-V-S-FYAVDSDGERILLYGKPEKKYMSEHNKLYIYD 250 (347)
T ss_dssp EEEEE--TTEEEEEEEE-E-S-EEEEEECSSCEEEEECCSSSCCCSSCEEEEEC
T ss_pred EEEeC--CCceEEeccC-c-c-eeeECCCCCEEEEEEccccCCccccceEEEEC
Confidence 99999 5666655443 2 1 22348999988776543 24787777
No 272
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.69 E-value=0.0033 Score=60.83 Aligned_cols=149 Identities=7% Similarity=-0.026 Sum_probs=91.6
Q ss_pred cceEEEecCCCEEEEecCCeEEEEEc-CCc-e-EEeeeecCccccCe--EECCCC-cEEEE-ECCCcEEEEe-cCC--cE
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLHK-NGT-W-ENWKLIGGDTLLGI--TTTQEN-EILVC-DADKGLLKVT-EEG--VT 148 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~~-~g~-~-~~~~~~~~~p~~gl--~~d~~g-~L~va-~~~~gl~~~~-~~g--~~ 148 (373)
..++++.+++.|.+|+.+|.|..++. ++. . ..+........ ++ ++.++| .++++ ...+.+..+| .++ ..
T Consensus 269 v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~-sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~ 347 (524)
T 2j04_B 269 ITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL-SVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTK 347 (524)
T ss_dssp EEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE-EEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHC
T ss_pred EEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEeecccccEE-EEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccc
Confidence 45677777778889999999999994 342 2 22222233345 77 456777 66554 4444456666 555 33
Q ss_pred EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeE-EEeecCCCCcceEEEcc
Q 017317 149 VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET-SILLDSLFFANGVALSK 227 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-~~~~~~~~~~~gi~~~~ 227 (373)
.+.....+ ..+..+++.|+|..+++.+. .+.|..+|..++.. ..+.........++|+|
T Consensus 348 ~~~~~~~~---~~v~~v~fsp~~~~l~s~~~-----------------d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp 407 (524)
T 2j04_B 348 TTVSRFRG---SNLVPVVYCPQIYSYIYSDG-----------------ASSLRAVPSRAAFAVHPLVSRETTITAIGVSR 407 (524)
T ss_dssp EEEEECSC---CSCCCEEEETTTTEEEEECS-----------------SSEEEEEETTCTTCCEEEEECSSCEEEEECCS
T ss_pred cccccccc---CcccceEeCCCcCeEEEeCC-----------------CCcEEEEECcccccceeeecCCCceEEEEeCC
Confidence 33222111 12568899999988776543 35677778766543 33333334567899999
Q ss_pred CCCEEEEEeCCCCeEEEEEecC
Q 017317 228 DEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 228 dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
+|+. +++...++.|..++...
T Consensus 408 ~g~~-l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 408 LHPM-VLAGSADGSLIITNAAR 428 (524)
T ss_dssp SCCB-CEEEETTTEEECCBSCS
T ss_pred CCCe-EEEEECCCEEEEEechH
Confidence 9984 45555677788777544
No 273
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.68 E-value=0.0065 Score=54.98 Aligned_cols=133 Identities=16% Similarity=0.177 Sum_probs=82.4
Q ss_pred eEEEEeCCCCeEEEee-------cCCCCcceEEE--ccC-CC-EEEEEeCCCCeEEEEEecCCC---Cc--ceeEEecCC
Q 017317 199 KLLKYDPSLNETSILL-------DSLFFANGVAL--SKD-ED-YLVVCETFKFRCLKYWLKGES---KE--QTEIFVENL 262 (373)
Q Consensus 199 ~l~~~d~~~~~~~~~~-------~~~~~~~gi~~--~~d-g~-~l~v~~~~~~~i~~~~~~~~~---~~--~~~~~~~~~ 262 (373)
.+|.+|++++....+. ..+..|.|+++ +++ ++ ++|+++. ..++..|.+.... .. ..+.+ .+
T Consensus 102 ~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k-~G~~~q~~l~~~~~g~~~~~lVR~f--~l 178 (355)
T 3amr_A 102 EIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGK-EGEFEQYELKADKNGYISGKKVRAF--KM 178 (355)
T ss_dssp EEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECS-SSEEEEEEEEECTTSCEEEEEEEEE--EC
T ss_pred EEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECC-CCeEEEEEEEeCCCCcccceEEEEe--cC
Confidence 4566688887776652 33477899999 664 43 4666665 4788888774221 11 11222 34
Q ss_pred CCCCCceeECC-CCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECCC------CcEEEEEe
Q 017317 263 PGGPDNIKLAP-DGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAAN------GIVIRKFE 335 (373)
Q Consensus 263 ~g~p~~i~~d~-dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~~------g~~~~~~~ 335 (373)
++-|.+++.|+ .|+||++.... .|.+|+.+ ++.+..+.
T Consensus 179 gsq~EgcvvDd~~g~Lyv~eEd~-----------------------------------GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 179 NSQTEGMAADDEYGRLYIAEEDE-----------------------------------AIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEETTT-----------------------------------EEEEEECSTTSCSCCEEEEEBS
T ss_pred CCCcceEEEcCCCCeEEEecccc-----------------------------------eEEEEeCCcCCCCCceEEEEec
Confidence 56788899885 67899998764 36777733 33443332
Q ss_pred CCCCceecceeEEEE--e-C--CEEEEeeCCCCeEEEeeCC
Q 017317 336 DPNGKVMSFVTSALE--F-D--DHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 336 ~~~g~~~~~~~~~~~--~-~--g~L~vgs~~~~~i~~~~l~ 371 (373)
.+.....+..+.. . + ++|++++.+.+...+|+..
T Consensus 224 --~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 224 --GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp --SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred --CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 2221223555543 2 1 4799999888899988875
No 274
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.66 E-value=0.011 Score=59.19 Aligned_cols=183 Identities=11% Similarity=0.104 Sum_probs=96.8
Q ss_pred ceEEEecCCCEEE--Eec----CCeEEEEE-cCCceEEeeeecCc-cccCeEECCCCc-EEEEECCCc------------
Q 017317 80 EDVCVDRNGVLYT--ATR----DGWIKRLH-KNGTWENWKLIGGD-TLLGITTTQENE-ILVCDADKG------------ 138 (373)
Q Consensus 80 ~~ia~d~~G~l~v--~~~----~g~I~~~~-~~g~~~~~~~~~~~-p~~gl~~d~~g~-L~va~~~~g------------ 138 (373)
.++++.|||+..+ .+. ...|+.++ .+|+.......... .. ++++.+||+ |+.+.....
T Consensus 124 ~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~-~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~ 202 (695)
T 2bkl_A 124 GTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYA-TPKWTPDSKGFYYEWLPTDPSIKVDERPGYT 202 (695)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTC-CCEECTTSSEEEEEECCCCTTSCGGGGGGGC
T ss_pred EEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccccc-ceEEecCCCEEEEEEecCCCCCccccCCCCC
Confidence 4567888888653 222 24688888 44543301111111 25 889999997 444443222
Q ss_pred -EEEEe-cCC-c--EEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE
Q 017317 139 -LLKVT-EEG-V--TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (373)
Q Consensus 139 -l~~~~-~~g-~--~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 212 (373)
|++++ .++ . +.+... .+. .....++.+++||+ |.++... ......||.++..+++.+.
T Consensus 203 ~v~~~~l~t~~~~~~lv~~~-~~~-~~~~~~~~~SpDG~~l~~~~~~--------------~~~~~~l~~~~~~~~~~~~ 266 (695)
T 2bkl_A 203 TIRYHTLGTEPSKDTVVHER-TGD-PTTFLQSDLSRDGKYLFVYILR--------------GWSENDVYWKRPGEKDFRL 266 (695)
T ss_dssp EEEEEETTSCGGGCEEEECC-CCC-TTCEEEEEECTTSCCEEEEEEE--------------TTTEEEEEEECTTCSSCEE
T ss_pred EEEEEECCCCchhceEEEec-CCC-CEEEEEEEECCCCCEEEEEEeC--------------CCCceEEEEEcCCCCceEE
Confidence 78877 445 2 233222 111 12345788999995 5554321 0023478888876666665
Q ss_pred eecCCCCcceEEEccCCCEEEEEeC---CCCeEEEEEecCCCCcceeEEecCC-CCCCCceeECCCCCEEEEEe
Q 017317 213 LLDSLFFANGVALSKDEDYLVVCET---FKFRCLKYWLKGESKEQTEIFVENL-PGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 213 ~~~~~~~~~gi~~~~dg~~l~v~~~---~~~~i~~~~~~~~~~~~~~~~~~~~-~g~p~~i~~d~dG~lwva~~ 282 (373)
+...........+ ++|+ +|+... .+.+|+++++++........+.... .....+++++ ++.+++...
T Consensus 267 l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 267 LVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp EEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred eecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 5544333333433 7887 777654 3578999987654322223333221 1123345555 566666544
No 275
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.63 E-value=0.043 Score=53.69 Aligned_cols=40 Identities=28% Similarity=0.314 Sum_probs=26.7
Q ss_pred EEEEEEC-CCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeC
Q 017317 319 AAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSL 360 (373)
Q Consensus 319 g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~ 360 (373)
+.+..+| .+|+.+..+..+.+.....++ . ..+|++|++..
T Consensus 507 g~l~A~D~~tG~~lW~~~~~~g~~a~P~~-y-~~~G~qYv~~~ 547 (582)
T 1flg_A 507 GYFKAFDAKSGKELWKFQTGSGIVSPPIT-W-EQDGEQYLGVT 547 (582)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEE-E-EETTEEEEEEE
T ss_pred CcEEEEECCCCCEEEEecCCCCcccCceE-E-EECCEEEEEEE
Confidence 3578898 579999998877654222222 1 36889888854
No 276
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.63 E-value=0.024 Score=56.72 Aligned_cols=177 Identities=11% Similarity=0.054 Sum_probs=90.8
Q ss_pred ceEEEecCCCEE--EEecC----CeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEECCC-------------c
Q 017317 80 EDVCVDRNGVLY--TATRD----GWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDADK-------------G 138 (373)
Q Consensus 80 ~~ia~d~~G~l~--v~~~~----g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~-------------g 138 (373)
.++++.|||+.. ..+.. ..|+.++ .+|+............ ++++. ||+ |+++.... .
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~-~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFS-GISWL-GNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESC-CCEEE-TTTEEEEEESSCCC-------CCCCE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceec-cEEEe-CCCEEEEEEecCcccccccccCCCcE
Confidence 345778888744 33322 3577777 4565433211111124 67787 775 66654331 2
Q ss_pred EEEEe-cCC---cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCC--eEE
Q 017317 139 LLKVT-EEG---VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--ETS 211 (373)
Q Consensus 139 l~~~~-~~g---~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--~~~ 211 (373)
|++++ .++ .+.+.......+ ....++.+++||+ |+++... ......||.+|.+++ ..+
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~-~~~~~~~~SpDg~~l~~~~~~--------------~~~~~~i~~~d~~~~~~~~~ 274 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQH-HRYVGATVTEDDRFLLISAAN--------------STSGNRLYVKDLSQENAPLL 274 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGC-CSEEEEEECTTSCEEEEEEES--------------SSSCCEEEEEETTSTTCCCE
T ss_pred EEEEECCCCcccceEEEecCCCCC-eEEEEEEEcCCCCEEEEEEcc--------------CCCCcEEEEEECCCCCCceE
Confidence 66666 333 133322111001 1234678899996 5555332 112247899987654 444
Q ss_pred EeecCCCCcceEEEccCCCEEEEEeCC---CCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCE
Q 017317 212 ILLDSLFFANGVALSKDEDYLVVCETF---KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSF 277 (373)
Q Consensus 212 ~~~~~~~~~~gi~~~~dg~~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~l 277 (373)
.+...... .--.++++|+.+|+.... +.+|+++++++......+.+....... +.++.+|+.
T Consensus 275 ~l~~~~~~-~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~---~~~s~~g~~ 339 (693)
T 3iuj_A 275 TVQGDLDA-DVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQV---LTVHSGSGY 339 (693)
T ss_dssp EEECSSSS-CEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSC---EEEEEETTE
T ss_pred EEeCCCCc-eEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCE---EEEEEECCE
Confidence 44433222 112267788878877543 368999998765443334444322222 245555653
No 277
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.61 E-value=0.0025 Score=63.83 Aligned_cols=162 Identities=6% Similarity=-0.020 Sum_probs=85.2
Q ss_pred cceEEEecCCCEE-EEec---------CCeEEEEEc-CCce---EEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-
Q 017317 79 PEDVCVDRNGVLY-TATR---------DGWIKRLHK-NGTW---ENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT- 143 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~---------~g~I~~~~~-~g~~---~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~- 143 (373)
..++++.|||+.. ++.. ++.|+.++. +|+. ..+ ..... .+++.+||+..+......|+.++
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~-~~~~SPDG~~la~~~~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQ-YLCWSPVGSKLAYVYQNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBC-CEEECSSTTCEEEEETTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Ccccc-cceECCCCCEEEEEECCeEEEEeC
Confidence 5678999999854 4443 478888884 4444 222 23456 88999999744333345688888
Q ss_pred cCC-cEEEeecc-CC-----cc--------ccccceeEEcCCCc-EEEEeCCccccccccc-----------------cc
Q 017317 144 EEG-VTVLASHV-NG-----SR--------INLADDLIAATDGS-IYFSVASTKFGLHNWG-----------------LD 190 (373)
Q Consensus 144 ~~g-~~~l~~~~-~~-----~~--------~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~-----------------~~ 190 (373)
.+| ...+.... .. .+ +....++++.|||+ |.++.... -....+. ..
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~-~~~~~~~~~~~~~~~~~~~~~~~yp~ 216 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND-TDIPVIAYSYYGDEQYPRTINIPYPK 216 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC-TTSCEEEEEECCSSSSCEEEEEECCB
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC-CCCceEEeeccCCCCCccceeecCCC
Confidence 566 44432111 00 00 01224789999996 44432110 0000000 00
Q ss_pred cccccCCceEEEEeCCCCeEE---Eee------cCCCCcceEEEccCCCEEEEE--eCCC--CeEEEEE
Q 017317 191 LLEAKPHGKLLKYDPSLNETS---ILL------DSLFFANGVALSKDEDYLVVC--ETFK--FRCLKYW 246 (373)
Q Consensus 191 ~~~~~~~g~l~~~d~~~~~~~---~~~------~~~~~~~gi~~~~dg~~l~v~--~~~~--~~i~~~~ 246 (373)
.........|+.+|.++++.. .+. ........++|+||++ ++++ +... ..|+.++
T Consensus 217 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 217 AGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp TTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEE
T ss_pred CCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEc
Confidence 001112337888888766531 221 1112235789999976 5554 2222 3477777
No 278
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.59 E-value=0.0095 Score=55.76 Aligned_cols=148 Identities=11% Similarity=0.053 Sum_probs=86.1
Q ss_pred CcceEEEec-CCC-EEEEecCCeEEEEEcCCc-eEEeeeec---CccccCeEECCCCcEEEE-ECCCcEEEEecCC--cE
Q 017317 78 GPEDVCVDR-NGV-LYTATRDGWIKRLHKNGT-WENWKLIG---GDTLLGITTTQENEILVC-DADKGLLKVTEEG--VT 148 (373)
Q Consensus 78 ~P~~ia~d~-~G~-l~v~~~~g~I~~~~~~g~-~~~~~~~~---~~p~~gl~~d~~g~L~va-~~~~gl~~~~~~g--~~ 148 (373)
.-.+|++.| ++. |+.++.+|.|..+|..+. ...+.... .... .++++++|.++++ ...+.|..++.++ +.
T Consensus 166 ~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~ 244 (435)
T 4e54_B 166 SITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFC-SLDVSASSRMVVTGDNVGNVILLNMDGKELW 244 (435)
T ss_dssp CCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCC-CEEEETTTTEEEEECSSSBEEEEESSSCBCC
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEE-EEEECCCCCEEEEEeCCCcEeeeccCcceeE
Confidence 356788986 565 557778999999995443 33332211 1234 7889999986665 4434466666333 22
Q ss_pred EEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEE-Eee--cC-CCCcceE
Q 017317 149 VLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-ILL--DS-LFFANGV 223 (373)
Q Consensus 149 ~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~--~~-~~~~~gi 223 (373)
.+. + ....+.++++.|++. +.++.+. .+.|..+|..+.+.. .+. .+ ......+
T Consensus 245 ~~~----~-h~~~v~~v~~~p~~~~~~~s~s~-----------------d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~ 302 (435)
T 4e54_B 245 NLR----M-HKKKVTHVALNPCCDWFLATASV-----------------DQTVKIWDLRQVRGKASFLYSLPHRHPVNAA 302 (435)
T ss_dssp CSB----C-CSSCEEEEEECTTCSSEEEEEET-----------------TSBCCEEETTTCCSSSCCSBCCBCSSCEEEC
T ss_pred EEe----c-ccceEEeeeecCCCceEEEEecC-----------------cceeeEEecccccccceEEEeeeccccccce
Confidence 221 1 113577899999885 5444322 355666665543211 111 11 1223578
Q ss_pred EEccCCCEEEEEeCCCCeEEEEEecC
Q 017317 224 ALSKDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 224 ~~~~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
+|+|||+.|+.+ ..++.|..|++..
T Consensus 303 ~~spdg~~l~s~-~~D~~i~iwd~~~ 327 (435)
T 4e54_B 303 CFSPDGARLLTT-DQKSEIRVYSASQ 327 (435)
T ss_dssp CBCTTSSEEEEE-ESSSCEEEEESSS
T ss_pred eECCCCCeeEEE-cCCCEEEEEECCC
Confidence 899999955544 4567788888754
No 279
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.55 E-value=0.053 Score=54.20 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=27.0
Q ss_pred EEEEEEC-CCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeC
Q 017317 319 AAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSL 360 (373)
Q Consensus 319 g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~ 360 (373)
+.+..+| .+|+.+..+..+.+.....++. ..+|+.|++..
T Consensus 496 g~l~a~D~~tG~~lw~~~~~~~~~~~p~ty--~~~G~qyv~~~ 536 (689)
T 1yiq_A 496 GRVIAYAADTGEKLWEQPAASGVMAAPVTY--SVDGEQYVTFM 536 (689)
T ss_dssp SEEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEEE
T ss_pred CcEEEEECCCCccceeeeCCCCcccCceEE--EECCEEEEEEE
Confidence 3588898 5699999888776543222222 46889998865
No 280
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.55 E-value=0.026 Score=50.29 Aligned_cols=150 Identities=14% Similarity=0.087 Sum_probs=84.3
Q ss_pred CcceEEEecCCCEE-EEecCCeEEEEE-cCCceE---EeeeecCccccCeEECC--CCc-EEEEECCCcEEEEe-cCC-c
Q 017317 78 GPEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWE---NWKLIGGDTLLGITTTQ--ENE-ILVCDADKGLLKVT-EEG-V 147 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~---~~~~~~~~p~~gl~~d~--~g~-L~va~~~~gl~~~~-~~g-~ 147 (373)
.-.+++++++|++. +++.++.|..++ .+++.. .+....+... .+++.+ +|+ |..+...+.+..++ +++ .
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~-~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVW-QVAWAHPMYGNILASCSYDRKVIIWREENGTW 93 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEE-EEEECCGGGSSCEEEEETTSCEEEECCSSSCC
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEE-EEEeCCCCCCCEEEEEECCCEEEEEECCCCcc
Confidence 34678898888765 677899999988 444322 2222233455 788864 355 55556556677777 555 3
Q ss_pred EEEeeccCCccccccceeEEcCC--CcEEEEeCCccccccccccccccccCCceEEEEeCCCC-eEEEe--ecC-CCCcc
Q 017317 148 TVLASHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ETSIL--LDS-LFFAN 221 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~d--G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~~--~~~-~~~~~ 221 (373)
+.... ..+. ...++++++.|+ |.+.++.+. .+.|..+|..++ ..... ... ....+
T Consensus 94 ~~~~~-~~~h-~~~V~~v~~~p~~~g~~lasgs~-----------------D~~i~lwd~~~~~~~~~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 94 EKSHE-HAGH-DSSVNSVCWAPHDYGLILACGSS-----------------DGAISLLTYTGEGQWEVKKINNAHTIGCN 154 (316)
T ss_dssp CEEEE-ECCC-SSCCCEEEECCTTTCSCEEEECS-----------------SSCEEEEEECSSSCEEECCBTTSSSSCBC
T ss_pred eEEEE-ccCC-CCceEEEEECCCCCCcEEEEEcC-----------------CCCEEEEecCCCCCcceeeeeccccCCcc
Confidence 32221 1111 135788999987 665555432 355665655433 22211 111 12235
Q ss_pred eEEEccCC-----------------CEEEEEeCCCCeEEEEEec
Q 017317 222 GVALSKDE-----------------DYLVVCETFKFRCLKYWLK 248 (373)
Q Consensus 222 gi~~~~dg-----------------~~l~v~~~~~~~i~~~~~~ 248 (373)
.++++|+. + ++++...++.|..+++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~ 197 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEE 197 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEEC
T ss_pred eEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeC
Confidence 67777762 3 45555556677777764
No 281
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.54 E-value=0.03 Score=56.38 Aligned_cols=184 Identities=10% Similarity=0.074 Sum_probs=95.2
Q ss_pred ceEEEecCCCEE-EE-ecCC----eEEEEE-cCCceEEeeeecCccccCeEECCCCcEEEEECCC--------------c
Q 017317 80 EDVCVDRNGVLY-TA-TRDG----WIKRLH-KNGTWENWKLIGGDTLLGITTTQENEILVCDADK--------------G 138 (373)
Q Consensus 80 ~~ia~d~~G~l~-v~-~~~g----~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~--------------g 138 (373)
.++++.|||+.. ++ +.+| .|+.++ .+|+............ ++++.+|..|+++.... .
T Consensus 166 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~-~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (741)
T 1yr2_A 166 DAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFS-GLAWLGNDALLYSRFAEPKEGQAFQALNYNQT 244 (741)
T ss_dssp EEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESC-CCEESTTSEEEEEECCCC--------CCCCCE
T ss_pred EeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceec-cEEEECCCEEEEEEecCcccccccccCCCCCE
Confidence 346778888754 32 3333 488888 4555433211111224 78898884466654322 2
Q ss_pred EEEEe-cCC-c--EEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCC--e-E
Q 017317 139 LLKVT-EEG-V--TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--E-T 210 (373)
Q Consensus 139 l~~~~-~~g-~--~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--~-~ 210 (373)
|++++ .++ . ..+... .+.+ ....++.+++||+ |.++.... ......|+.+|.+++ + .
T Consensus 245 v~~~~lgt~~~~~~lv~~~-~~~~-~~~~~~~~SpDG~~l~~~~~~~-------------~~~~~~l~~~d~~~~~~~~~ 309 (741)
T 1yr2_A 245 VWLHRLGTPQSADQPVFAT-PELP-KRGHGASVSSDGRWVVITSSEG-------------TDPVNTVHVARVTNGKIGPV 309 (741)
T ss_dssp EEEEETTSCGGGCEEEECC-TTCT-TCEEEEEECTTSCEEEEEEECT-------------TCSCCEEEEEEEETTEECCC
T ss_pred EEEEECCCCchhCEEEecc-CCCC-eEEEEEEECCCCCEEEEEEEcc-------------CCCcceEEEEECCCCCCccc
Confidence 66666 444 2 233222 1111 1345778999995 55543210 012357888887766 4 4
Q ss_pred EEeecCCCCcceEEEccCCCEEEEEeCC---CCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 211 SILLDSLFFANGVALSKDEDYLVVCETF---KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 211 ~~~~~~~~~~~gi~~~~dg~~l~v~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
+.+.......... +++||+.+|+.... +.+|+++++++.. .....+.........++..+ ++.+++...
T Consensus 310 ~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~ 381 (741)
T 1yr2_A 310 TALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST-PRFDTVVPESKDNLESVGIA-GNRLFASYI 381 (741)
T ss_dssp EEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE-BTEEEEEEE
T ss_pred EEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE-CCEEEEEEE
Confidence 5544333222223 45899988887642 4579999876532 23333332222222344554 455555543
No 282
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.54 E-value=0.057 Score=50.40 Aligned_cols=221 Identities=14% Similarity=0.082 Sum_probs=116.6
Q ss_pred cceEEEecCCCEEEEecCCeEEEEE-cCCceEE-eeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC--cEEEeec
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG--VTVLASH 153 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g--~~~l~~~ 153 (373)
..+++++ ++.+++++.+|.|..++ .+++... +........ .+.++ ++.++++...+.+..++ .++ ...+...
T Consensus 162 v~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~-~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~ 238 (445)
T 2ovr_B 162 VWSSQMR-DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVR-CMHLH-EKRVVSGSRDATLRVWDIETGQCLHVLMGH 238 (445)
T ss_dssp EEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEE-TTEEEEEETTSEEEEEESSSCCEEEEEECC
T ss_pred EEEEEec-CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEE-EEEec-CCEEEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 3445555 44566777888888888 4444322 222223344 66675 33566666655567777 555 3333211
Q ss_pred cCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCC-CCcceEEEccCCCEE
Q 017317 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL-FFANGVALSKDEDYL 232 (373)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~-~~~~gi~~~~dg~~l 232 (373)
...+..+.+ +|..+++.+ ..+.|..+|..+++........ .....+++ +++.+
T Consensus 239 -----~~~v~~~~~--~~~~l~~~~-----------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l 292 (445)
T 2ovr_B 239 -----VAAVRCVQY--DGRRVVSGA-----------------YDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHV 292 (445)
T ss_dssp -----SSCEEEEEE--CSSCEEEEE-----------------TTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEE
T ss_pred -----cccEEEEEE--CCCEEEEEc-----------------CCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEE
Confidence 123455666 554444332 2467888887766544333322 22334555 77755
Q ss_pred EEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEE-ecCCCchhhhccCChHHHHHHHhcchhhhh
Q 017317 233 VVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI-LQLSSPGLEFVHTSKATKHLLAAFPKLIKL 311 (373)
Q Consensus 233 ~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 311 (373)
+.+. .++.|..|++...+. ...+. ........+.. +|++.++. ..+
T Consensus 293 ~~~~-~d~~i~i~d~~~~~~--~~~~~-~~~~~v~~~~~--~~~~l~~~~~dg--------------------------- 339 (445)
T 2ovr_B 293 VSGS-LDTSIRVWDVETGNC--IHTLT-GHQSLTSGMEL--KDNILVSGNADS--------------------------- 339 (445)
T ss_dssp EEEE-TTSCEEEEETTTCCE--EEEEC-CCCSCEEEEEE--ETTEEEEEETTS---------------------------
T ss_pred EEEe-CCCeEEEEECCCCCE--EEEEc-CCcccEEEEEE--eCCEEEEEeCCC---------------------------
Confidence 5554 567788898754321 11221 11122233443 45544443 333
Q ss_pred ccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeCC
Q 017317 312 VAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 312 ~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l~ 371 (373)
.+..+| .+++.+..+..+... ...++.+..+++.|..|+. ...|..+++.
T Consensus 340 --------~i~vwd~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~l~s~~~-dg~v~iwd~~ 390 (445)
T 2ovr_B 340 --------TVKIWDIKTGQCLQTLQGPNKH-QSAVTCLQFNKNFVITSSD-DGTVKLWDLK 390 (445)
T ss_dssp --------CEEEEETTTCCEEEEECSTTSC-SSCEEEEEECSSEEEEEET-TSEEEEEETT
T ss_pred --------eEEEEECCCCcEEEEEccCCCC-CCCEEEEEECCCEEEEEeC-CCeEEEEECC
Confidence 355666 367777777653322 3456777766666766664 3457666654
No 283
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.022 Score=51.11 Aligned_cols=142 Identities=9% Similarity=0.060 Sum_probs=74.6
Q ss_pred CeEECCCCcEEEEECCCcEEEEe-cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCc
Q 017317 121 GITTTQENEILVCDADKGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHG 198 (373)
Q Consensus 121 gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g 198 (373)
.+.++++ .|..+...+.+..++ ..+ .+.+.....+.....+.++++.|+|.+.++.+. .+
T Consensus 19 ~~~~s~~-~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~-----------------D~ 80 (330)
T 2hes_X 19 SFDFSQG-ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSF-----------------DS 80 (330)
T ss_dssp EEEEETT-EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEET-----------------TS
T ss_pred eeccCCC-EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeC-----------------CC
Confidence 6777665 444455545566666 444 333221111112235788999999987766542 35
Q ss_pred eEEEEeCCCC-------eEEEeecC-CCCcceEEEccCCCEEEEEeCCCCeEEEEEecCC-CCcc-eeEEecCCCCCCCc
Q 017317 199 KLLKYDPSLN-------ETSILLDS-LFFANGVALSKDEDYLVVCETFKFRCLKYWLKGE-SKEQ-TEIFVENLPGGPDN 268 (373)
Q Consensus 199 ~l~~~d~~~~-------~~~~~~~~-~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~-~~~~-~~~~~~~~~g~p~~ 268 (373)
.|..+|.... +......+ ......++|+|+++.|. +...++.|..+++... .... ...+. .-......
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~la-s~s~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~ 158 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLA-TCSRDKSVWIWETDESGEEYECISVLQ-EHSQDVKH 158 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEE-EEETTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEE-EEeCCCEEEEEeccCCCCCeEEEEEec-cCCCceEE
Confidence 5666665321 11111222 23346799999998544 4445677888887421 1111 11221 11223456
Q ss_pred eeECCCCCEEEEEe
Q 017317 269 IKLAPDGSFWIAIL 282 (373)
Q Consensus 269 i~~d~dG~lwva~~ 282 (373)
+++.++|++.++..
T Consensus 159 v~~~p~~~~l~s~s 172 (330)
T 2hes_X 159 VIWHPSEALLASSS 172 (330)
T ss_dssp EEECSSSSEEEEEE
T ss_pred EEECCCCCEEEEEc
Confidence 77888888666544
No 284
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.52 E-value=0.058 Score=50.00 Aligned_cols=226 Identities=11% Similarity=-0.021 Sum_probs=121.5
Q ss_pred cceEEEecCCCEE-EEecCCeEEEEE-cCCceEE-eeeecCccccCeEECCCCcEEE-EECCCcEEEEe-cCC---cEEE
Q 017317 79 PEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILV-CDADKGLLKVT-EEG---VTVL 150 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g---~~~l 150 (373)
-.+|++.++|... +|+.+|.|..++ .+++... +........ .+.. ++.+.+ +.....+..++ ... ...+
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~-~~s~--~~~~l~sgs~d~~i~~~d~~~~~~~~~~~ 226 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG-SLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATL 226 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE-EEee--CCCEEEEEeCCCceeEeeecccceeeEEe
Confidence 4678899988766 788999999998 4454322 222223334 5555 455444 45444455555 332 2222
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeE-----EEeecCCCCcceEEE
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET-----SILLDSLFFANGVAL 225 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-----~~~~~~~~~~~gi~~ 225 (373)
... ...+..+.+.++|...++... .+.+..++..+++. ............+++
T Consensus 227 ~~h-----~~~~~~~~~~~~g~~l~s~~~-----------------D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 284 (420)
T 4gga_A 227 SGH-----SQEVCGLRWAPDGRHLASGGN-----------------DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 284 (420)
T ss_dssp ECC-----SSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEE
T ss_pred ccc-----ccceeeeeecCCCCeeeeeec-----------------cccceEEeeccccccceeeeeecccCCceeeeee
Confidence 111 124567788889987666432 35666666654431 111122223456888
Q ss_pred ccCCCEEEEEe--CCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHH
Q 017317 226 SKDEDYLVVCE--TFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLA 303 (373)
Q Consensus 226 ~~dg~~l~v~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~ 303 (373)
++++..++++. +.++.|..|++..... ...+. .......+...++++..++..+..
T Consensus 285 ~p~~~~~la~~~gs~D~~I~iwd~~t~~~--~~~~~--~~~~v~~~~~~~~~~~lv~~sg~~------------------ 342 (420)
T 4gga_A 285 CPWQSNVLATGGGTSDRHIRIWNVCSGAC--LSAVD--AHSQVCSILWSPHYKELISGHGFA------------------ 342 (420)
T ss_dssp CTTCTTEEEEEECTTTCEEEEEETTTTEE--EEEEE--CSSCEEEEEEETTTTEEEEEECTT------------------
T ss_pred CCCcccEEEEEeecCCCEEEEEeCCcccc--ceeec--cccceeeeeecCCCCeEEEEEecC------------------
Confidence 88776566543 3456677777653321 11111 122345566778887666554321
Q ss_pred hcchhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEe-CC-EEEEeeCCCCeEEEeeC
Q 017317 304 AFPKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEF-DD-HLYLGSLNTNFIGKLPL 370 (373)
Q Consensus 304 ~~~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~vgs~~~~~i~~~~l 370 (373)
.+.|..+| ++++.+..+.... ..++.+... +| .|.-|+. ...|..-++
T Consensus 343 --------------d~~I~iwd~~~~~~v~~l~gH~----~~V~~l~~spdg~~l~S~s~-D~tvriWdv 393 (420)
T 4gga_A 343 --------------QNQLVIWKYPTMAKVAELKGHT----SRVLSLTMSPDGATVASAAA-DETLRLWRC 393 (420)
T ss_dssp --------------TCCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSCEEEEET-TTEEEEECC
T ss_pred --------------CCEEEEEECCCCcEEEEEcCCC----CCEEEEEEcCCCCEEEEEec-CCeEEEEEC
Confidence 12355566 5678888776443 347777776 34 3444443 233444443
No 285
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.44 E-value=0.048 Score=54.28 Aligned_cols=41 Identities=20% Similarity=0.304 Sum_probs=26.3
Q ss_pred EEEEEC-CCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCC
Q 017317 320 AVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNT 362 (373)
Q Consensus 320 ~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~ 362 (373)
.+..+| .+|+.+..+..+.+.....++. ..+|++|++..++
T Consensus 480 ~l~a~d~~tG~~l~~~~~~~~~~~~p~~~--~~~G~~yva~~~G 521 (668)
T 1kv9_A 480 QMHAYSADKGEALWQFEAQSGIVAAPMTF--ELAGRQYVAIMAG 521 (668)
T ss_dssp EEEEEETTTCCEEEEEECSSCCCSCCEEE--EETTEEEEEEEEC
T ss_pred cchhhhhhcChhheEecCCCCcccCceEE--EECCEEEEEEEec
Confidence 578888 4699998887765532222222 4578888876543
No 286
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.43 E-value=0.029 Score=49.39 Aligned_cols=183 Identities=12% Similarity=0.119 Sum_probs=95.4
Q ss_pred cceEEEec--CCCEE-EEecCCeEEEEE-cCCceE---EeeeecCccccCeEECCC--CcEE-EEECCCcEEEEe-cCC-
Q 017317 79 PEDVCVDR--NGVLY-TATRDGWIKRLH-KNGTWE---NWKLIGGDTLLGITTTQE--NEIL-VCDADKGLLKVT-EEG- 146 (373)
Q Consensus 79 P~~ia~d~--~G~l~-v~~~~g~I~~~~-~~g~~~---~~~~~~~~p~~gl~~d~~--g~L~-va~~~~gl~~~~-~~g- 146 (373)
-.++++.+ +|.+. .++.++.|..++ .+++.. .+........ .+++.++ |.++ .+...+.+..++ .++
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee-EEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 45677753 36554 777899999998 344322 2222223445 7888876 6544 455544455566 433
Q ss_pred -cEEEeeccCCccccccceeEEcCC-------------CcEEEEeCCccccccccccccccccCCceEEEEeCCCCe---
Q 017317 147 -VTVLASHVNGSRINLADDLIAATD-------------GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE--- 209 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~d-------------G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~--- 209 (373)
..... ..+ ....++.+++.|+ ++++++.+. .+.|..+|..+++
T Consensus 135 ~~~~~~--~~~-h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~-----------------D~~v~lwd~~~~~~~~ 194 (297)
T 2pm7_B 135 TTSPII--IDA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------DNLVKIWKYNSDAQTY 194 (297)
T ss_dssp CBCCEE--EEC-CSSCEEEEEECCCC------------CCEEEEEET-----------------TSCEEEEEEETTTTEE
T ss_pred ceeeee--eec-ccCccceEeecCCcccccccCCCCCCcceEEEEcC-----------------CCcEEEEEEcCCCceE
Confidence 21111 011 1124567777776 344444322 3445555443332
Q ss_pred -EEEeecC-CCCcceEEEccCC--CEEEEEeCCCCeEEEEEecCCCCcceeEEe--cCCCCCCCceeECCCCCEEEEEe
Q 017317 210 -TSILLDS-LFFANGVALSKDE--DYLVVCETFKFRCLKYWLKGESKEQTEIFV--ENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 210 -~~~~~~~-~~~~~gi~~~~dg--~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
......+ ......++|+|++ ..++++...++.|..+++............ .........++++++|++.++..
T Consensus 195 ~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 195 VLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp EEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 1111222 2345789999986 346666666778888887643211111111 11122344577889998666543
No 287
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.41 E-value=0.012 Score=60.94 Aligned_cols=150 Identities=8% Similarity=-0.009 Sum_probs=92.7
Q ss_pred cceEEEecCCC-EEEEecCCeEEEEE-cCCceEEeeeecCccccCeEECCCCc-EEEEECCCcEEEEe-cCC-cEEEee-
Q 017317 79 PEDVCVDRNGV-LYTATRDGWIKRLH-KNGTWENWKLIGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG-VTVLAS- 152 (373)
Q Consensus 79 P~~ia~d~~G~-l~v~~~~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g-~~~l~~- 152 (373)
-.++++.+ |. |..++.++.|..++ .+++........+... .++++++|+ |+++...+.+..++ +++ ...+..
T Consensus 61 V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~-~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~ 138 (902)
T 2oaj_A 61 IKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVFVPGKIT-SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLD 138 (902)
T ss_dssp EEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEECSSCEE-EEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEEC
T ss_pred EEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEcCCCCEE-EEEECCCCCEEEEEcCCCcEEEEECCCCccccceec
Confidence 46788888 66 66778899999999 4454322222334556 889999996 55566656677777 555 322211
Q ss_pred ------ccCCccccccceeEEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCC--------
Q 017317 153 ------HVNGSRINLADDLIAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL-------- 217 (373)
Q Consensus 153 ------~~~~~~~~~~~~l~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~-------- 217 (373)
.........+.++++.|++ .+.++.+ ..+.| .+|..+++........
T Consensus 139 ~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~-----------------~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~ 200 (902)
T 2oaj_A 139 NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISY-----------------EYVTL-TYSLVENEIKQSFIYELPPFAPGG 200 (902)
T ss_dssp CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEEC-----------------SSCEE-EEETTTTEEEEEECCCBCTTCCCS
T ss_pred cccccccccccCCCCeEEEEEccCCCCEEEEEe-----------------CCCcE-EEECCCCceEEEEecccCCcCCCc
Confidence 0011112357899999964 4444332 24677 8888777654333221
Q ss_pred -----------CCcceEEEccCCCEEEEEeCCCCeEEEEEecC
Q 017317 218 -----------FFANGVALSKDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 218 -----------~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
.....++|+|||+.+ ++...++.|..|++..
T Consensus 201 ~~~~~~~~~h~~~V~~v~fspdg~~l-asgs~Dg~i~lWd~~~ 242 (902)
T 2oaj_A 201 DFSEKTNEKRTPKVIQSLYHPNSLHI-ITIHEDNSLVFWDANS 242 (902)
T ss_dssp TTCCCTTSCBCCCEEEEEECTTSSEE-EEEETTCCEEEEETTT
T ss_pred ccccccccccCCCeEEEEEcCCCCEE-EEEECCCeEEEEECCC
Confidence 235679999999844 4445567788888753
No 288
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=97.39 E-value=0.024 Score=52.68 Aligned_cols=150 Identities=11% Similarity=0.061 Sum_probs=86.1
Q ss_pred CcceEEEecCCCEE-EEecCCeEEEEEc----CCceEEeee-------------ecCccccCeE--ECCCCcEE-EEECC
Q 017317 78 GPEDVCVDRNGVLY-TATRDGWIKRLHK----NGTWENWKL-------------IGGDTLLGIT--TTQENEIL-VCDAD 136 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~g~I~~~~~----~g~~~~~~~-------------~~~~p~~gl~--~d~~g~L~-va~~~ 136 (373)
...++++.+++..+ +++.+|.|..++. .++...... ...... .+. +.+++.++ .+...
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d 191 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAV-RMRAFVNEEKSLLVALTNL 191 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEE-EEEEEECSSCEEEEEEETT
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCce-EEEEEEcCCCCEEEEEeCC
Confidence 35678888877655 7778899888873 443322111 111122 333 44667654 45555
Q ss_pred CcEEEEe-cCC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe
Q 017317 137 KGLLKVT-EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL 213 (373)
Q Consensus 137 ~gl~~~~-~~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~ 213 (373)
+.|..+| .++ ...+... .....+.+++++++|.+.++.+. .|.|..+|..+++....
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~---~h~~~v~~~~~s~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~ 251 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENS---PRHGAVSSICIDEECCVLILGTT-----------------RGIIDIWDIRFNVLIRS 251 (437)
T ss_dssp SEEEEEETTTCCEEEEEECC---GGGCCEEEEEECTTSCEEEEEET-----------------TSCEEEEETTTTEEEEE
T ss_pred CeEEEEeCCCCeeeEEEccC---CCCCceEEEEECCCCCEEEEEcC-----------------CCeEEEEEcCCccEEEE
Confidence 5577777 555 3333221 01235789999999987666432 47788888877665433
Q ss_pred e--cCCCCcceEEEc----cCCCEEEEEeCCCCeEEEEEecC
Q 017317 214 L--DSLFFANGVALS----KDEDYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 214 ~--~~~~~~~gi~~~----~dg~~l~v~~~~~~~i~~~~~~~ 249 (373)
. ........++++ ++++ ++++...++.|..|++..
T Consensus 252 ~~~~~~~~v~~~~~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 252 WSFGDHAPITHVEVCQFYGKNSV-IVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp EBCTTCEEEEEEEECTTTCTTEE-EEEEESTTEEEEEEETTT
T ss_pred EecCCCCceEEEEeccccCCCcc-EEEEEcCCCcEEEEEcCC
Confidence 2 222233566444 4565 555555666788888753
No 289
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.38 E-value=0.022 Score=51.95 Aligned_cols=137 Identities=12% Similarity=0.052 Sum_probs=78.6
Q ss_pred CCeEEEEE-cCCceEEeeeecCccccCeEECC-CCc-EEEEECC------CcEEEEe-cCC-cEEEeeccCCccccccce
Q 017317 96 DGWIKRLH-KNGTWENWKLIGGDTLLGITTTQ-ENE-ILVCDAD------KGLLKVT-EEG-VTVLASHVNGSRINLADD 164 (373)
Q Consensus 96 ~g~I~~~~-~~g~~~~~~~~~~~p~~gl~~d~-~g~-L~va~~~------~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~ 164 (373)
...|+.++ ..|+.+.+........ .+.+.+ +|. |+++... ..|+.++ ..+ .+.+... .+...+..
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~~~~~-~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~---~~~~~~~~ 242 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDTAWLG-HPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEH---AEGESCTH 242 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEESSCEE-EEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCC---CTTEEEEE
T ss_pred cceEEEEECCCCcEEeeccCCcccc-cceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeecc---CCCccccc
Confidence 34678888 4555555444334455 678888 665 5444322 2578888 444 4444321 11123566
Q ss_pred eEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEcc-CCCEEEEEeC-----
Q 017317 165 LIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSK-DEDYLVVCET----- 237 (373)
Q Consensus 165 l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~-dg~~l~v~~~----- 237 (373)
+++.|||+ |+++... .+...+.|+.+|..+++.+.+... ...+ +++++ ||+.++.+..
T Consensus 243 ~~~spdg~~l~~~~~~-------------~~~~~~~l~~~d~~~g~~~~l~~~-~~~~-~~~s~~dg~~l~~~~~~~p~~ 307 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYF-------------KGQTDRVIYKANPETLENEEVMVM-PPCS-HLMSNFDGSLMVGDGCDAPVD 307 (396)
T ss_dssp EEECTTSSCEEEEEEE-------------TTTCCEEEEEECTTTCCEEEEEEC-CSEE-EEEECSSSSEEEEEECCC---
T ss_pred eEECCCCCEEEEEecC-------------CCCccceEEEEECCCCCeEEeeeC-CCCC-CCccCCCCceEEEecCCccee
Confidence 79999996 6555321 011124599999988876654321 1122 88999 9995555431
Q ss_pred ----------CCCeEEEEEecCCC
Q 017317 238 ----------FKFRCLKYWLKGES 251 (373)
Q Consensus 238 ----------~~~~i~~~~~~~~~ 251 (373)
....|+++++.+..
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp -------CCCCCCEEEEEETTTTB
T ss_pred eccccccccCCCCcEEEEecccCc
Confidence 34678888876543
No 290
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.37 E-value=0.015 Score=58.82 Aligned_cols=182 Identities=12% Similarity=0.132 Sum_probs=99.6
Q ss_pred CcceEEEecC--CCEE-EEecCCeEEEEE-cCCceEEe---eeecCccccCeEECCC--CcEE-EEECCCcEEEEe-cCC
Q 017317 78 GPEDVCVDRN--GVLY-TATRDGWIKRLH-KNGTWENW---KLIGGDTLLGITTTQE--NEIL-VCDADKGLLKVT-EEG 146 (373)
Q Consensus 78 ~P~~ia~d~~--G~l~-v~~~~g~I~~~~-~~g~~~~~---~~~~~~p~~gl~~d~~--g~L~-va~~~~gl~~~~-~~g 146 (373)
...++++.++ |... +++.+|.|..++ .+++.... ........ .+++.++ |+++ ++...+.+..++ .++
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~-~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeE-EEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 3566788765 6554 778899999998 44542222 22233445 8899887 7654 455545566666 433
Q ss_pred --cEEEeeccCCccccccceeEEcC-------------CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe--
Q 017317 147 --VTVLASHVNGSRINLADDLIAAT-------------DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE-- 209 (373)
Q Consensus 147 --~~~l~~~~~~~~~~~~~~l~~~~-------------dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~-- 209 (373)
...... .+ ....+..+++.| +|.+.++.+. .|.|..+|..++.
T Consensus 134 ~~~~~~~~--~~-~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-----------------dg~I~iwd~~~~~~~ 193 (753)
T 3jro_A 134 GTTSPIII--DA-HAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------DNLVKIWKYNSDAQT 193 (753)
T ss_dssp SCCCCEEE--EC-CSSCEEEEEECCCC---------CGGGCCEEEEET-----------------TSCEEEEEEETTTTE
T ss_pred CCcceeEe--ec-CCCceEEEEecCcccccccccccCCCCCEEEEEEC-----------------CCeEEEEeccCCccc
Confidence 111111 11 112466788887 4654444322 3566666654332
Q ss_pred --EEEeec-CCCCcceEEEccC---CCEEEEEeCCCCeEEEEEecCCCCcceeEEec--CCCCCCCceeECCCCCEEEEE
Q 017317 210 --TSILLD-SLFFANGVALSKD---EDYLVVCETFKFRCLKYWLKGESKEQTEIFVE--NLPGGPDNIKLAPDGSFWIAI 281 (373)
Q Consensus 210 --~~~~~~-~~~~~~gi~~~~d---g~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~g~p~~i~~d~dG~lwva~ 281 (373)
...... .......++++|+ ++ ++++...++.|..|++............. ...+....++++++|++.++.
T Consensus 194 ~~~~~~~~~h~~~V~~l~~sp~~~~~~-~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 194 YVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp EEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred ceeeeeecCCCCcEEEEEeccCCCCCC-EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 111122 2234568999999 66 55555566788889876532111111110 122345667888888754443
No 291
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.35 E-value=0.0032 Score=60.91 Aligned_cols=135 Identities=14% Similarity=0.036 Sum_probs=85.9
Q ss_pred cceEEEecCCCEE-EEecCCeEEEEEc-CCce--------EEeeee----cCccccCeEECCCCcEEEEECCCcEEEEe-
Q 017317 79 PEDVCVDRNGVLY-TATRDGWIKRLHK-NGTW--------ENWKLI----GGDTLLGITTTQENEILVCDADKGLLKVT- 143 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~~g~I~~~~~-~g~~--------~~~~~~----~~~p~~gl~~d~~g~L~va~~~~gl~~~~- 143 (373)
-.++++.|+|++. +|+.+|.|..++. ++.. ..+... ..... .+++.++| +.++..++.+..++
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~-sVawSPdg-Laass~D~tVrlWd~ 209 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT-HIVWYEDV-LVAALSNNSVFSMTV 209 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE-EEEEETTE-EEEEETTCCEEEECC
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE-EEEEcCCc-EEEEeCCCeEEEEEC
Confidence 5679999977655 7889999999993 3431 232111 13456 89999999 76777777788888
Q ss_pred cCC-cE-EEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee-cCCCCc
Q 017317 144 EEG-VT-VLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL-DSLFFA 220 (373)
Q Consensus 144 ~~g-~~-~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ 220 (373)
.++ .. ....-..+ ....+.++++. |...++.+ .+.|..+|..+++..... ......
T Consensus 210 ~~~~~~~~~~tL~~~-h~~~V~svaFs--g~~LASa~------------------~~tIkLWd~~~~~~~~~~~gh~~~V 268 (588)
T 2j04_A 210 SASSHQPVSRMIQNA-SRRKITDLKIV--DYKVVLTC------------------PGYVHKIDLKNYSISSLKTGSLENF 268 (588)
T ss_dssp CSSSSCCCEEEEECC-CSSCCCCEEEE--TTEEEEEC------------------SSEEEEEETTTTEEEEEECSCCSCC
T ss_pred CCCccccceeeeccc-ccCcEEEEEEE--CCEEEEEe------------------CCeEEEEECCCCeEEEEEcCCCceE
Confidence 444 32 11110011 11357788887 45544433 268999998877775544 334456
Q ss_pred ceEEE--ccCCCEEEEEe
Q 017317 221 NGVAL--SKDEDYLVVCE 236 (373)
Q Consensus 221 ~gi~~--~~dg~~l~v~~ 236 (373)
.++++ ++|+..+.++.
T Consensus 269 ~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 269 HIIPLNHEKESTILLMSN 286 (588)
T ss_dssp CEEEETTCSSCEEEEECS
T ss_pred EEEEeeeCCCCCEEEEEc
Confidence 78999 99997555554
No 292
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.35 E-value=0.023 Score=56.68 Aligned_cols=111 Identities=13% Similarity=0.166 Sum_probs=65.6
Q ss_pred CCCEEEEecCCeEEEEE-cCCceEEeeeecC-----------c-cccCeEECCCCcEEEEECCCcEEEEe-cCC-cEEEe
Q 017317 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIGG-----------D-TLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLA 151 (373)
Q Consensus 87 ~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~-----------~-p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l~ 151 (373)
+|.||+++.++.|+.+| .+|+..-...... . .. +++++ ++++|++.....|+.+| .+| ...-.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNR-GVALW-GDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCC-CCEEE-BTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCcc-ceEEE-CCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 79999999999999999 6776432211110 0 12 45664 67899998767799999 788 43322
Q ss_pred eccCCc-cccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE
Q 017317 152 SHVNGS-RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (373)
Q Consensus 152 ~~~~~~-~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 212 (373)
...... .........+. +|.+|++.....+ ...|.|+.+|..+++...
T Consensus 144 ~~~~~~~~~~~~~~P~v~-~~~v~vg~~~~~~------------~~~g~v~a~D~~tG~~~W 192 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVV-KGKVIIGNGGAEY------------GVRGFVSAYDADTGKLAW 192 (668)
T ss_dssp ECSCTTSSCBCCSCCEEE-TTEEEECCBCTTT------------CCBCEEEEEETTTCCEEE
T ss_pred ccCCCCCcceecCCCEEE-CCEEEEeCCCCCc------------CCCCEEEEEECCCCcEEE
Confidence 211100 01111111222 6789987643111 124789999988887653
No 293
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.32 E-value=0.0081 Score=60.59 Aligned_cols=131 Identities=6% Similarity=-0.060 Sum_probs=75.9
Q ss_pred eEEEecCCCEEEEecCCeEEEEE-cCCceEEeeeecC-ccc----cCeEECCCCcE-EEEECC---------CcEEEEe-
Q 017317 81 DVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLIGG-DTL----LGITTTQENEI-LVCDAD---------KGLLKVT- 143 (373)
Q Consensus 81 ~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~-~p~----~gl~~d~~g~L-~va~~~---------~gl~~~~- 143 (373)
++...++|.+++.. +|.|+.++ .+|+.+.+..... ... .++.+++||+. .++... ..++.++
T Consensus 21 ~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 21 SLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp CEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred ccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Confidence 56777888766554 88999999 4555444322111 111 02677999974 333221 2345677
Q ss_pred cCC-cEEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec-CC---
Q 017317 144 EEG-VTVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD-SL--- 217 (373)
Q Consensus 144 ~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~--- 217 (373)
.+| .+.+... . ......++.|||+ |.++. .+.|+.++..+++...+.. +.
T Consensus 100 ~~~~~~~l~~~-~----~~~~~~~~SPdG~~la~~~-------------------~~~i~~~~~~~~~~~~lt~~g~~~~ 155 (740)
T 4a5s_A 100 NKRQLITEERI-P----NNTQWVTWSPVGHKLAYVW-------------------NNDIYVKIEPNLPSYRITWTGKEDI 155 (740)
T ss_dssp TTTEECCSSCC-C----TTEEEEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCSCCBTTT
T ss_pred CCCcEEEcccC-C----CcceeeEECCCCCEEEEEE-------------------CCeEEEEECCCCceEEEcCCCCccc
Confidence 556 4333211 1 1355778999995 55442 2478888877766554321 11
Q ss_pred ---------------CCcceEEEccCCCEEEEEe
Q 017317 218 ---------------FFANGVALSKDEDYLVVCE 236 (373)
Q Consensus 218 ---------------~~~~gi~~~~dg~~l~v~~ 236 (373)
....+++|||||+.|.+..
T Consensus 156 ~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 156 IYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp EEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred eecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 1223588999999887763
No 294
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.32 E-value=0.075 Score=46.83 Aligned_cols=113 Identities=12% Similarity=-0.036 Sum_probs=66.1
Q ss_pred ccccCeEECCCCcEEE-EECCCcEEEEe-cCC---cEEEeeccCCccccccceeEEcC--CCcEEEEeCCcccccccccc
Q 017317 117 DTLLGITTTQENEILV-CDADKGLLKVT-EEG---VTVLASHVNGSRINLADDLIAAT--DGSIYFSVASTKFGLHNWGL 189 (373)
Q Consensus 117 ~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g---~~~l~~~~~~~~~~~~~~l~~~~--dG~l~v~~~~~~~~~~~~~~ 189 (373)
... .++++++|++++ +...+.+..++ .++ .+.+.. ..+ ....+.++++.+ ||.+.++.+.
T Consensus 13 ~v~-~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~~-~~~~v~~~~~~~~~d~~~l~s~~~---------- 79 (351)
T 3f3f_A 13 LVH-DVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDS-WRA-HDSSIVAIDWASPEYGRIIASASY---------- 79 (351)
T ss_dssp CEE-EEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEE-EEC-CSSCEEEEEECCGGGCSEEEEEET----------
T ss_pred cee-EEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecce-ecc-CCCcEEEEEEcCCCCCCEEEEEcC----------
Confidence 345 889999997554 44444466666 433 233221 111 123577889988 5876666432
Q ss_pred ccccccCCceEEEEeCCCCe----------EEEeecCCCCcceEEEccC--CCEEEEEeCCCCeEEEEEecCC
Q 017317 190 DLLEAKPHGKLLKYDPSLNE----------TSILLDSLFFANGVALSKD--EDYLVVCETFKFRCLKYWLKGE 250 (373)
Q Consensus 190 ~~~~~~~~g~l~~~d~~~~~----------~~~~~~~~~~~~gi~~~~d--g~~l~v~~~~~~~i~~~~~~~~ 250 (373)
.+.|..+|..+++ ...+.........++++++ ++.++.+ ..++.|..|++...
T Consensus 80 -------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~-~~dg~v~iwd~~~~ 144 (351)
T 3f3f_A 80 -------DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACL-GNDGILRLYDALEP 144 (351)
T ss_dssp -------TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEE-ETTCEEEEEECSST
T ss_pred -------CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEe-cCCCcEEEecCCCh
Confidence 3566666655442 2222222344578999999 8855554 45678999987644
No 295
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.30 E-value=0.041 Score=55.06 Aligned_cols=104 Identities=10% Similarity=-0.026 Sum_probs=60.8
Q ss_pred cceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCC-
Q 017317 162 ADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFK- 239 (373)
Q Consensus 162 ~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~- 239 (373)
..++++.|||+ |.++... .+.....|+.+|.++++............+++|+|||+.++++....
T Consensus 127 ~~~~~~SPDg~~la~~~~~-------------~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~ 193 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSA-------------SGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQ 193 (710)
T ss_dssp EEEEEECTTSSEEEEEEEE-------------TTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCC
T ss_pred EEEEEECCCCCEEEEEEcC-------------CCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCc
Confidence 45788999996 4444221 01112379999998887654221111246799999999898876432
Q ss_pred --------------CeEEEEEecCCCCcceeEEecC-CCCCCCceeECCCCCEE
Q 017317 240 --------------FRCLKYWLKGESKEQTEIFVEN-LPGGPDNIKLAPDGSFW 278 (373)
Q Consensus 240 --------------~~i~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d~dG~lw 278 (373)
..|+++++.+.......++... .+....++.+++||+..
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l 247 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYV 247 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEE
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEE
Confidence 3488888755432222222211 12233467889999743
No 296
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.30 E-value=0.11 Score=48.29 Aligned_cols=145 Identities=13% Similarity=0.070 Sum_probs=79.6
Q ss_pred cceEEEecCCCEEEEecCCeEEEEE-cCCceEE-eeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC-cEEEeecc
Q 017317 79 PEDVCVDRNGVLYTATRDGWIKRLH-KNGTWEN-WKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLASHV 154 (373)
Q Consensus 79 P~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~-~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l~~~~ 154 (373)
..+++++ +..|++++.+|.|..++ .+++... +........ .++++ ++.++.+...+.+..++ .++ ........
T Consensus 176 v~~l~~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 252 (435)
T 1p22_A 176 VLCLQYD-ERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL-HLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRRVL 252 (435)
T ss_dssp EEEEECC-SSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE-EEECC-TTEEEEEETTSCEEEEECSSSSCCEEEEEE
T ss_pred EEEEEEC-CCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEE-EEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeeeEe
Confidence 3445553 34455788899999999 4554332 222233344 77775 34666666666677777 544 21111111
Q ss_pred CCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC-CCCcceEEEccCCCEEE
Q 017317 155 NGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS-LFFANGVALSKDEDYLV 233 (373)
Q Consensus 155 ~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~~gi~~~~dg~~l~ 233 (373)
.+. ...+..+.+ +|...++.+ ..+.|..+|..+++....... ......+++ +++ ++
T Consensus 253 ~~~-~~~v~~~~~--~~~~l~s~~-----------------~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~-~l 309 (435)
T 1p22_A 253 VGH-RAAVNVVDF--DDKYIVSAS-----------------GDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDR-LV 309 (435)
T ss_dssp CCC-SSCEEEEEE--ETTEEEEEE-----------------TTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETT-EE
T ss_pred cCC-CCcEEEEEe--CCCEEEEEe-----------------CCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCC-EE
Confidence 111 123556666 555444432 247888999887765443332 222334555 556 44
Q ss_pred EEeCCCCeEEEEEecC
Q 017317 234 VCETFKFRCLKYWLKG 249 (373)
Q Consensus 234 v~~~~~~~i~~~~~~~ 249 (373)
++...++.|..|++..
T Consensus 310 ~~g~~dg~i~iwd~~~ 325 (435)
T 1p22_A 310 VSGSSDNTIRLWDIEC 325 (435)
T ss_dssp EEEETTSCEEEEETTT
T ss_pred EEEeCCCeEEEEECCC
Confidence 4445567899998754
No 297
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.30 E-value=0.12 Score=50.61 Aligned_cols=111 Identities=16% Similarity=0.123 Sum_probs=64.8
Q ss_pred CCCEEEEec-CCeEEEEEc--CCceEEeeeecC------------ccccCeEEC-CCCc----EEEEECCCcEEEEe-cC
Q 017317 87 NGVLYTATR-DGWIKRLHK--NGTWENWKLIGG------------DTLLGITTT-QENE----ILVCDADKGLLKVT-EE 145 (373)
Q Consensus 87 ~G~l~v~~~-~g~I~~~~~--~g~~~~~~~~~~------------~p~~gl~~d-~~g~----L~va~~~~gl~~~~-~~ 145 (373)
+|.||+++. ++.|+.+|. +|+..-...... ... ++++. .++. ||+++....|+.+| .+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~-g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNR-GLAYWPGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCC-CCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCcccccccccccccc-ceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence 789999998 899999996 676432211111 113 56763 2566 99998767799999 78
Q ss_pred C-cEEEeeccCCcc-c-cccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE
Q 017317 146 G-VTVLASHVNGSR-I-NLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (373)
Q Consensus 146 g-~~~l~~~~~~~~-~-~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 212 (373)
| ...-.. ..... . .....-.+. +|.+|++....++ ...|.|+.+|.++++...
T Consensus 141 G~~~W~~~-~~~~~~~~~~~ssP~v~-~g~V~vg~~g~e~------------g~~g~v~A~D~~TG~~~W 196 (599)
T 1w6s_A 141 GETVWKVE-NSDIKVGSTLTIAPYVV-KDKVIIGSSGAEL------------GVRGYLTAYDVKTGEQVW 196 (599)
T ss_dssp CCEEEEEE-CCCGGGTCBCCSCCEEE-TTEEEECCBCGGG------------TCCCEEEEEETTTCCEEE
T ss_pred CCEEEeec-CCCCCccceeecCCEEE-CCEEEEEeccccc------------CCCCeEEEEECCCCcEEE
Confidence 8 432221 11100 0 011111222 6789887643111 124789999988887543
No 298
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.26 E-value=0.1 Score=47.20 Aligned_cols=223 Identities=10% Similarity=0.004 Sum_probs=114.2
Q ss_pred CCcceEEEecCCCEEEEecCCeEEEEEcC-CceEEeeeecCccccCeEECCCCcEE-EE-ECCCcEEEEe-cCC--cEEE
Q 017317 77 NGPEDVCVDRNGVLYTATRDGWIKRLHKN-GTWENWKLIGGDTLLGITTTQENEIL-VC-DADKGLLKVT-EEG--VTVL 150 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~v~~~~g~I~~~~~~-g~~~~~~~~~~~p~~gl~~d~~g~L~-va-~~~~gl~~~~-~~g--~~~l 150 (373)
..-.++++.++|.+++...+.++..++.+ ++.. ......... .+.+..++++. ++ ...+.+..+| .++ ...+
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~ 97 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHI-MSQEMRHLS-KVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRI 97 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSSEEEEEEETTEEEE-EEEECSCCC-EEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCEEEEEecCCccee-eeeecCCeE-EEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEE
Confidence 34578999999998854444567777733 2222 111112222 44555555544 33 3233566677 566 2222
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCC-eE-EEeecCCCCcce-EEEcc
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ET-SILLDSLFFANG-VALSK 227 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~-~~~~~~~~~~~g-i~~~~ 227 (373)
. .. ..+.++.+.+++.+ ++. .+.+..+|..++ +. ..+.. +.+ .++++
T Consensus 98 ~--~~----~~v~~v~~~~~~~~-~~~-------------------~~~i~i~d~~~~~~~~~~~~~----~~~~~~~s~ 147 (355)
T 3vu4_A 98 K--VD----APVKDLFLSREFIV-VSY-------------------GDVISVFKFGNPWKRITDDIR----FGGVCEFSN 147 (355)
T ss_dssp E--CS----SCEEEEEECSSEEE-EEE-------------------TTEEEEEESSTTCCBSSCCEE----EEEEEEEET
T ss_pred E--CC----CceEEEEEcCCEEE-EEE-------------------cCEEEEEECCCCceeeEEecc----CCceEEEEc
Confidence 1 11 24567777766433 332 146777776654 21 11111 333 34555
Q ss_pred CCCEEEEE-eCCCCeEEEEEecCCCCc-------------c-eeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhc
Q 017317 228 DEDYLVVC-ETFKFRCLKYWLKGESKE-------------Q-TEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFV 292 (373)
Q Consensus 228 dg~~l~v~-~~~~~~i~~~~~~~~~~~-------------~-~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~ 292 (373)
+.+.++ ....+.|..+++...... . ...+. .-.+....++++++|++.++....
T Consensus 148 --~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~h~~~v~~~~~s~~g~~l~s~s~d-------- 216 (355)
T 3vu4_A 148 --GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-AHTNPIKMVRLNRKSDMVATCSQD-------- 216 (355)
T ss_dssp --TEEEEEESSCTTCEEEEECCC------------------CCEEEC-CCSSCEEEEEECTTSSEEEEEETT--------
T ss_pred --cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-ccCCceEEEEECCCCCEEEEEeCC--------
Confidence 445555 456677888887643200 0 11221 112345668899999877665432
Q ss_pred cCChHHHHHHHhcchhhhhccCCCccEE-EEEEC-CCCcEEEEEeCCCCceecceeEEEEeC-CE-EEEeeCCCCeEEEe
Q 017317 293 HTSKATKHLLAAFPKLIKLVAPLHKKAA-VVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFD-DH-LYLGSLNTNFIGKL 368 (373)
Q Consensus 293 ~~~p~~~~~~~~~~~~~~~~~~~~~~g~-v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~-L~vgs~~~~~i~~~ 368 (373)
+. +..+| .+++.+..+.. |.+...+..+.+.. ++ |..++ ....|...
T Consensus 217 --------------------------~~~v~iwd~~~~~~~~~~~~--g~h~~~v~~~~~s~~~~~l~s~s-~d~~v~iw 267 (355)
T 3vu4_A 217 --------------------------GTIIRVFKTEDGVLVREFRR--GLDRADVVDMKWSTDGSKLAVVS-DKWTLHVF 267 (355)
T ss_dssp --------------------------CSEEEEEETTTCCEEEEEEC--TTCCSCEEEEEECTTSCEEEEEE-TTCEEEEE
T ss_pred --------------------------CCEEEEEECCCCcEEEEEEc--CCCCCcEEEEEECCCCCEEEEEE-CCCEEEEE
Confidence 22 44555 35777777752 11123567777663 43 44444 34456666
Q ss_pred eCC
Q 017317 369 PLK 371 (373)
Q Consensus 369 ~l~ 371 (373)
++.
T Consensus 268 ~~~ 270 (355)
T 3vu4_A 268 EIF 270 (355)
T ss_dssp ESS
T ss_pred Ecc
Confidence 654
No 299
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.23 E-value=0.048 Score=48.48 Aligned_cols=183 Identities=11% Similarity=0.041 Sum_probs=93.5
Q ss_pred CcceEEEec--CC-CEEEEecCCeEEEEE-cCCceE---EeeeecCccccCeEECCC--CcEEE-EECCCcEEEEe-cCC
Q 017317 78 GPEDVCVDR--NG-VLYTATRDGWIKRLH-KNGTWE---NWKLIGGDTLLGITTTQE--NEILV-CDADKGLLKVT-EEG 146 (373)
Q Consensus 78 ~P~~ia~d~--~G-~l~v~~~~g~I~~~~-~~g~~~---~~~~~~~~p~~gl~~d~~--g~L~v-a~~~~gl~~~~-~~g 146 (373)
.-.++++.+ +| .|..++.++.|..++ .+++.. .+........ ++++.++ |.+++ +...+.+..++ ..+
T Consensus 59 ~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~g~~lasgs~D~~i~lwd~~~~ 137 (316)
T 3bg1_A 59 PVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN-SVCWAPHDYGLILACGSSDGAISLLTYTGE 137 (316)
T ss_dssp CEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC-EEEECCTTTCSCEEEECSSSCEEEEEECSS
T ss_pred cEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE-EEEECCCCCCcEEEEEcCCCCEEEEecCCC
Confidence 345677753 34 455788899999998 444322 2222233455 8899876 65444 44444455566 333
Q ss_pred -cEEEeeccCCccccccceeEEcCCC-----------------cEEEEeCCccccccccccccccccCCceEEEEeCCCC
Q 017317 147 -VTVLASHVNGSRINLADDLIAATDG-----------------SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN 208 (373)
Q Consensus 147 -~~~l~~~~~~~~~~~~~~l~~~~dG-----------------~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 208 (373)
.........+ ....++.+++.|++ .++++. ...+.|..+|..+.
T Consensus 138 ~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg-----------------s~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 138 GQWEVKKINNA-HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG-----------------GCDNLIKLWKEEED 199 (316)
T ss_dssp SCEEECCBTTS-SSSCBCCCEECCCCCC------CCSCCCCCCCBEECC-----------------BTTSBCCEEEECTT
T ss_pred CCcceeeeecc-ccCCcceEEEccccCCccccccccccCccccceEEEe-----------------cCCCeEEEEEeCCC
Confidence 2111111111 11245667777763 233322 12344444444322
Q ss_pred -eEEE--eecC-CCCcceEEEccCC----CEEEEEeCCCCeEEEEEecCCCCcc--eeEEecCCCCCCCceeECCCCCEE
Q 017317 209 -ETSI--LLDS-LFFANGVALSKDE----DYLVVCETFKFRCLKYWLKGESKEQ--TEIFVENLPGGPDNIKLAPDGSFW 278 (373)
Q Consensus 209 -~~~~--~~~~-~~~~~gi~~~~dg----~~l~v~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~g~p~~i~~d~dG~lw 278 (373)
+... ...+ ......++|+|++ + ++++...++.|..+++....... ...+. ...+....+++.++|++.
T Consensus 200 ~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~-~las~s~D~~v~iw~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~g~~l 277 (316)
T 3bg1_A 200 GQWKEEQKLEAHSDWVRDVAWAPSIGLPTS-TIASCSQDGRVFIWTCDDASSNTWSPKLLH-KFNDVVWHVSWSITANIL 277 (316)
T ss_dssp SCEEEEECCBCCSSCEEEEECCCCSSCSCC-EEEEEETTCEEEEEECSSTTCCCCBCCEEE-ECSSCEEEEEECTTTCCE
T ss_pred CccceeeecccCCCceEEEEecCCCCCCCc-eEEEEcCCCeEEEEEccCccccchhhhhhh-cCCCcEEEEEEcCCCCEE
Confidence 2221 1222 2234678999986 4 56666667788888875421111 11111 122344567888888765
Q ss_pred EEE
Q 017317 279 IAI 281 (373)
Q Consensus 279 va~ 281 (373)
++.
T Consensus 278 as~ 280 (316)
T 3bg1_A 278 AVS 280 (316)
T ss_dssp EEE
T ss_pred EEE
Confidence 544
No 300
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.23 E-value=0.13 Score=47.73 Aligned_cols=210 Identities=13% Similarity=0.094 Sum_probs=110.1
Q ss_pred cCCC-EEEEecCCeEEEEE-cCCceEEeee-ecCccccCeEECCCCc-EEEEECCCcEEEEe-cCC--cEEEeeccCCcc
Q 017317 86 RNGV-LYTATRDGWIKRLH-KNGTWENWKL-IGGDTLLGITTTQENE-ILVCDADKGLLKVT-EEG--VTVLASHVNGSR 158 (373)
Q Consensus 86 ~~G~-l~v~~~~g~I~~~~-~~g~~~~~~~-~~~~p~~gl~~d~~g~-L~va~~~~gl~~~~-~~g--~~~l~~~~~~~~ 158 (373)
.+|. +.+|+.+|.|..++ .+++...... ..+... .+.+ +++ |+++...+.+..++ .++ ...+...
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h----- 212 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHH----- 212 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEE-EEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCC-----
T ss_pred ECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEE-EEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCC-----
Confidence 3444 55788999999999 4554433222 223344 6776 454 55566555677777 666 3333211
Q ss_pred ccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEE---EeecC-CCCcceEEEccCCCEEEE
Q 017317 159 INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS---ILLDS-LFFANGVALSKDEDYLVV 234 (373)
Q Consensus 159 ~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~---~~~~~-~~~~~gi~~~~dg~~l~v 234 (373)
...+.++++++ +.++.+.. .+.|..+|..+++.. ....+ ......+++ +++.++.
T Consensus 213 ~~~v~~l~~~~-~~l~s~s~------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s 271 (435)
T 1p22_A 213 CEAVLHLRFNN-GMMVTCSK------------------DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVS 271 (435)
T ss_dssp CSCEEEEECCT-TEEEEEET------------------TSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEE
T ss_pred CCcEEEEEEcC-CEEEEeeC------------------CCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEE
Confidence 12355666642 33333332 367777887655422 11221 222344555 6775555
Q ss_pred EeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEE-EecCCCchhhhccCChHHHHHHHhcchhhhhcc
Q 017317 235 CETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIA-ILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVA 313 (373)
Q Consensus 235 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva-~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 313 (373)
+ ..++.|..|++..... ...+. ........+.. +|++.++ ...+
T Consensus 272 ~-~~dg~i~vwd~~~~~~--~~~~~-~~~~~v~~~~~--~~~~l~~g~~dg----------------------------- 316 (435)
T 1p22_A 272 A-SGDRTIKVWNTSTCEF--VRTLN-GHKRGIACLQY--RDRLVVSGSSDN----------------------------- 316 (435)
T ss_dssp E-ETTSEEEEEETTTCCE--EEEEE-CCSSCEEEEEE--ETTEEEEEETTS-----------------------------
T ss_pred E-eCCCeEEEEECCcCcE--EEEEc-CCCCcEEEEEe--CCCEEEEEeCCC-----------------------------
Confidence 5 4567888888754321 12222 11122233444 4554444 3333
Q ss_pred CCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEeCCEEEEeeCCCCeEEEeeC
Q 017317 314 PLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEFDDHLYLGSLNTNFIGKLPL 370 (373)
Q Consensus 314 ~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~vgs~~~~~i~~~~l 370 (373)
.+..+| .+++.+..+.... ..+..+..++..|..|+..+ .|..+++
T Consensus 317 ------~i~iwd~~~~~~~~~~~~h~----~~v~~~~~~~~~l~sg~~dg-~i~vwd~ 363 (435)
T 1p22_A 317 ------TIRLWDIECGACLRVLEGHE----ELVRCIRFDNKRIVSGAYDG-KIKVWDL 363 (435)
T ss_dssp ------CEEEEETTTCCEEEEECCCS----SCEEEEECCSSEEEEEETTS-CEEEEEH
T ss_pred ------eEEEEECCCCCEEEEEeCCc----CcEEEEEecCCEEEEEeCCC-cEEEEEC
Confidence 356666 3477777775433 34666666556777777544 4666554
No 301
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.15 E-value=0.007 Score=58.92 Aligned_cols=73 Identities=18% Similarity=0.201 Sum_probs=51.3
Q ss_pred cccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC--CCCcceEEEccCCCEEEEE
Q 017317 158 RINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVALSKDEDYLVVC 235 (373)
Q Consensus 158 ~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~~gi~~~~dg~~l~v~ 235 (373)
.+..|..|+++++|+|||++.+..... .....-.+..++.+++.+++...++.. .....|++|+||+++|||.
T Consensus 474 ~f~~PDNL~fd~~G~LwI~eDg~~~~~-----~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 474 MFNSPDGLGFDKAGRLWILTDGDSSNA-----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCCCEEEEEECTTCCEEEEECCCCCCS-----GGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CccCCcceEECCCCCEEEEecCCCccc-----ccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 466788999999999999865321100 011112345789999998988877654 3445799999999988876
No 302
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.08 E-value=0.13 Score=44.93 Aligned_cols=229 Identities=11% Similarity=-0.028 Sum_probs=116.2
Q ss_pred cceEEEecCCCEE-EEecCCeEEEEE-cCCceEEeeee-cCccccCeEECCCCcEEEEECCCcEEE-Ee-cCC-cEEEee
Q 017317 79 PEDVCVDRNGVLY-TATRDGWIKRLH-KNGTWENWKLI-GGDTLLGITTTQENEILVCDADKGLLK-VT-EEG-VTVLAS 152 (373)
Q Consensus 79 P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~~~~~~~~-~~~p~~gl~~d~~g~L~va~~~~gl~~-~~-~~g-~~~l~~ 152 (373)
-.++++.++|+.. +|+.+|.|..++ .+++....... ..... .+. .++.+.++....+..+ ++ ..+ ......
T Consensus 70 V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~-~~~--~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~ 146 (318)
T 4ggc_A 70 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG-SLS--WNSYILSSGSRSGHIHHHDVRVAEHHVATL 146 (318)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEE--EETTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEE-Eee--cCCCEEEEEecCCceEeeecCCCceeEEEE
Confidence 4578899988766 678899999998 45543322221 12222 333 3455444333344444 44 333 221111
Q ss_pred ccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEE-----EeecCCCCcceEEEcc
Q 017317 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS-----ILLDSLFFANGVALSK 227 (373)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-----~~~~~~~~~~gi~~~~ 227 (373)
. + .......+.+.++|+..++... .+.|..+|..+++.. ...........+++.+
T Consensus 147 ~--~-~~~~~~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 206 (318)
T 4ggc_A 147 S--G-HSQEVCGLRWAPDGRHLASGGN-----------------DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCP 206 (318)
T ss_dssp E--C-CSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECT
T ss_pred c--C-ccCceEEEEEcCCCCEEEEEec-----------------CcceeEEECCCCcccccceeeecccCCceEEEEecC
Confidence 1 1 1124567788888877666432 366777776654321 1111112234567777
Q ss_pred CCCEEEE-Ee-CCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhc
Q 017317 228 DEDYLVV-CE-TFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAF 305 (373)
Q Consensus 228 dg~~l~v-~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~ 305 (373)
++..++. +. .....|..++...... ..... .......+++.+++...++..+..
T Consensus 207 ~~~~~~~~~~~~~~~~i~lwd~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~~~~sg~~-------------------- 262 (318)
T 4ggc_A 207 WQSNVLATGGGTSDRHIRIWNVCSGAC--LSAVD--AHSQVCSILWSPHYKELISGHGFA-------------------- 262 (318)
T ss_dssp TSTTEEEEEECTTTCEEEEEETTTCCE--EEEEE--CSSCEEEEEEETTTTEEEEEECTT--------------------
T ss_pred CCCcEEEEEecCCCCEEEEEecccccc--ccccc--ceeeeeeeeecccccceEEEEEcC--------------------
Confidence 6654543 33 3334555555433221 11111 112234456677776555433211
Q ss_pred chhhhhccCCCccEEEEEEC-CCCcEEEEEeCCCCceecceeEEEEe-CC-EEEEeeCCCCeEEEeeCC
Q 017317 306 PKLIKLVAPLHKKAAVVNVA-ANGIVIRKFEDPNGKVMSFVTSALEF-DD-HLYLGSLNTNFIGKLPLK 371 (373)
Q Consensus 306 ~~~~~~~~~~~~~g~v~~~~-~~g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~vgs~~~~~i~~~~l~ 371 (373)
.+.+..+| .+++.+..+.... ..++.+.+. ++ .|.-|+. ...|..-++.
T Consensus 263 ------------d~~i~iwd~~~~~~~~~l~gH~----~~V~~l~~spdg~~l~S~s~-D~~v~iWd~~ 314 (318)
T 4ggc_A 263 ------------QNQLVIWKYPTMAKVAELKGHT----SRVLSLTMSPDGATVASAAA-DETLRLWRCF 314 (318)
T ss_dssp ------------TCCEEEEETTTCCEEEEECCCS----SCEEEEEECTTSSCEEEEET-TTEEEEECCS
T ss_pred ------------CCEEEEEECCCCcEEEEEcCCC----CCEEEEEEcCCCCEEEEEec-CCeEEEEECC
Confidence 12356666 5688888886543 357888876 34 4544443 3346555553
No 303
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.07 E-value=0.034 Score=50.43 Aligned_cols=134 Identities=14% Similarity=0.069 Sum_probs=76.1
Q ss_pred EecCCeEEEEE-cCCc-----------------eEEeeeecCccccCeEECCCCcEEEE-ECCCc-EEEEe-cCC--cEE
Q 017317 93 ATRDGWIKRLH-KNGT-----------------WENWKLIGGDTLLGITTTQENEILVC-DADKG-LLKVT-EEG--VTV 149 (373)
Q Consensus 93 ~~~~g~I~~~~-~~g~-----------------~~~~~~~~~~p~~gl~~d~~g~L~va-~~~~g-l~~~~-~~g--~~~ 149 (373)
|..+|.|..++ .+++ ...+....+... .++++++|++.++ ...+. +..+| .++ ...
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~-~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIK-MVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEE-EEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceE-EEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 35677888887 3332 223332334456 8999999986655 44444 66677 666 333
Q ss_pred EeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe---EEEeec-----------
Q 017317 150 LASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE---TSILLD----------- 215 (373)
Q Consensus 150 l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~----------- 215 (373)
+.. +.....+.+++++|+|.+.++.+. .+.|..+|..... ...+..
T Consensus 234 ~~~---g~h~~~v~~~~~s~~~~~l~s~s~-----------------d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (355)
T 3vu4_A 234 FRR---GLDRADVVDMKWSTDGSKLAVVSD-----------------KWTLHVFEIFNDQDNKRHALKGWINMKYFQSEW 293 (355)
T ss_dssp EEC---TTCCSCEEEEEECTTSCEEEEEET-----------------TCEEEEEESSCCSCCCSEETTTTEECCCCCCSS
T ss_pred EEc---CCCCCcEEEEEECCCCCEEEEEEC-----------------CCEEEEEEccCCCCcccccccceeecccccccc
Confidence 321 111235789999999987776543 3566666654321 111000
Q ss_pred ---------C-CCCcceEEEccCCCEEEEEeCCCCeEEEEEec
Q 017317 216 ---------S-LFFANGVALSKDEDYLVVCETFKFRCLKYWLK 248 (373)
Q Consensus 216 ---------~-~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~ 248 (373)
. ......+++++|++.+++. ..++.+..|++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~-~~dg~~~~~~~~ 335 (355)
T 3vu4_A 294 SLCNFKLSVDKHVRGCKIAWISESSLVVVW-PHTRMIETFKVV 335 (355)
T ss_dssp CSEEEECCCCTTCCCCEEEESSSSEEEEEE-TTTTEEEEEEEE
T ss_pred ceeEEEeccCCCCCceEEEEeCCCCEEEEE-eCCCeEEEEEEE
Confidence 0 0011457899999855555 456778888764
No 304
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.05 E-value=0.054 Score=48.42 Aligned_cols=100 Identities=18% Similarity=0.135 Sum_probs=62.5
Q ss_pred cceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCC--
Q 017317 162 ADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETF-- 238 (373)
Q Consensus 162 ~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~-- 238 (373)
...+.+.|||+ |+++... .......||.++.++++...+..... ...++|+|||+.|+++...
T Consensus 61 ~~~~~~SpDg~~la~~~~~-------------~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~ 126 (347)
T 2gop_A 61 ATMPRISPDGKKIAFMRAN-------------EEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRR 126 (347)
T ss_dssp CEEEEECTTSSEEEEEEEE-------------TTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCC
T ss_pred CCCeEECCCCCEEEEEEec-------------cCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCC
Confidence 45779999995 5554321 00122469999988887665543333 6789999999988887532
Q ss_pred ------------------------CCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEE
Q 017317 239 ------------------------KFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (373)
Q Consensus 239 ------------------------~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~ 281 (373)
...|+++++.+... ...+.. + ....++.++|| +.++.
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~--~~~l~~--~-~~~~~~~spdg-~~~~~ 187 (347)
T 2gop_A 127 EDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV--IEEFEK--P-RFSSGIWHRDK-IVVNV 187 (347)
T ss_dssp C---------CCCC---------CEEEEEEEETTTTEE--EEEEEE--E-TTCEEEEETTE-EEEEE
T ss_pred CcCCcEEEcccceeecCcccccCccceEEEEECCCCeE--EeeecC--C-CcccccCCCCe-EEEEE
Confidence 24678888755322 022222 2 45677888999 65554
No 305
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=97.01 E-value=0.0083 Score=57.66 Aligned_cols=124 Identities=15% Similarity=0.243 Sum_probs=77.1
Q ss_pred ccccccceeEEcC-CCcEEEEeCCccc-ccc---ccccccccccCCceEEEEeCCCC-------eEEEee-c--------
Q 017317 157 SRINLADDLIAAT-DGSIYFSVASTKF-GLH---NWGLDLLEAKPHGKLLKYDPSLN-------ETSILL-D-------- 215 (373)
Q Consensus 157 ~~~~~~~~l~~~~-dG~l~v~~~~~~~-~~~---~~~~~~~~~~~~g~l~~~d~~~~-------~~~~~~-~-------- 215 (373)
.++..|.+++++| +|.+|++-++..- +.. ............|.|+++..+.+ +++.++ .
T Consensus 381 T~mdRpEdi~v~p~~g~vY~alTnn~~rg~~~~~~~~~Npr~~n~~G~I~r~~e~~~d~~a~~f~W~i~l~~G~p~~~~~ 460 (592)
T 4a9v_A 381 TRMDRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAG 460 (592)
T ss_dssp CCEECEEEEEECTTTCCEEEEECCBTTTTSTTSCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTT
T ss_pred ccccCccceeEcCCCCEEEEEEeCCCCCCCcCccccCCCCccCCCCCeEEEEeeCCCCcccceeeEEEEEEccCCccccc
Confidence 4566789999998 6899999654211 100 01111222345689999975432 123321 0
Q ss_pred -------------CCCCcceEEEccCCCEEEE-EeCC-----------CCeEEEEEecCCCCcceeEEecCC-CCCCCce
Q 017317 216 -------------SLFFANGVALSKDEDYLVV-CETF-----------KFRCLKYWLKGESKEQTEIFVENL-PGGPDNI 269 (373)
Q Consensus 216 -------------~~~~~~gi~~~~dg~~l~v-~~~~-----------~~~i~~~~~~~~~~~~~~~~~~~~-~g~p~~i 269 (373)
.+..|+.++++++|+ ||+ ++.. ++.+++++.. .+....+.... ...|.|+
T Consensus 461 ~~~~g~~~~~~~~~fnsPDnL~fd~~G~-LWf~TD~~~~~~g~~~~~gnn~v~~~dp~---tGel~~fl~~P~~aEpnGi 536 (592)
T 4a9v_A 461 TPKGGSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPA---TGEIRRFMVGPIGCEVTGI 536 (592)
T ss_dssp SGGGCCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTCCSCEEEEECTT---TCCEEEEEECCTTCEEEEE
T ss_pred ccccCccCccccCccCCCCceEECCCCC-EEEEeCCCcCccccccccCCceEEEEeCC---CCeEEEEEeCCCCccccCC
Confidence 256789999999998 999 5432 3478887643 34455555322 2358999
Q ss_pred eECCCCC-EEEEEecC
Q 017317 270 KLAPDGS-FWIAILQL 284 (373)
Q Consensus 270 ~~d~dG~-lwva~~~~ 284 (373)
++++|++ |||+....
T Consensus 537 afSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 537 SFSPDQKTLFVGIQHP 552 (592)
T ss_dssp EECTTSSEEEEEEEST
T ss_pred EECCCCCEEEEEEeCC
Confidence 9999995 88887654
No 306
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.01 E-value=0.21 Score=46.10 Aligned_cols=142 Identities=13% Similarity=0.007 Sum_probs=83.0
Q ss_pred eEEEecCCCEEEEecCCeEEEEE-cCCceEEeeee--c-CccccCeEECCCCcEEE-EECCCcEEEEe-cCC--cEEEee
Q 017317 81 DVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLI--G-GDTLLGITTTQENEILV-CDADKGLLKVT-EEG--VTVLAS 152 (373)
Q Consensus 81 ~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~--~-~~p~~gl~~d~~g~L~v-a~~~~gl~~~~-~~g--~~~l~~ 152 (373)
.|+..+++.|-+|. ++.|+.++ .+|+....... . .... ++++.++|++++ +...+.+..++ .++ +..+.
T Consensus 110 ~l~wS~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~-sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~- 186 (420)
T 4gga_A 110 LVDWSSGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT- 186 (420)
T ss_dssp CEEECTTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-
T ss_pred eEEECCCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEE-EEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEe-
Confidence 46666655444654 78999999 66765543322 2 2345 899999997554 55555577777 666 22221
Q ss_pred ccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe--EEEeecCCCCcceEEEccCCC
Q 017317 153 HVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE--TSILLDSLFFANGVALSKDED 230 (373)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~--~~~~~~~~~~~~gi~~~~dg~ 230 (373)
+.. ..+..+ ..++.+.++.+ ..+.+..+|..... ...+........++.++++++
T Consensus 187 ---~h~-~~v~~~--s~~~~~l~sgs-----------------~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 187 ---SHS-ARVGSL--SWNSYILSSGS-----------------RSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR 243 (420)
T ss_dssp ---CCS-SCEEEE--EEETTEEEEEE-----------------TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred ---CCC-CceEEE--eeCCCEEEEEe-----------------CCCceeEeeecccceeeEEecccccceeeeeecCCCC
Confidence 111 123333 44566655543 24667777755432 223333344567889999998
Q ss_pred EEEEEeCCCCeEEEEEecC
Q 017317 231 YLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 231 ~l~v~~~~~~~i~~~~~~~ 249 (373)
.+... ..++.+..++...
T Consensus 244 ~l~s~-~~D~~v~i~~~~~ 261 (420)
T 4gga_A 244 HLASG-GNDNLVNVWPSAP 261 (420)
T ss_dssp EEEEE-ETTSCEEEEESSC
T ss_pred eeeee-eccccceEEeecc
Confidence 55444 4566788887653
No 307
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.94 E-value=0.2 Score=48.91 Aligned_cols=112 Identities=16% Similarity=0.210 Sum_probs=62.5
Q ss_pred CCCEEEEecCCeEEEEE-cCCceEEeeeecCc----------cccCeEECCCCcEEEEECCCcEEEEe-cCC-cEEEeec
Q 017317 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIGGD----------TLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLASH 153 (373)
Q Consensus 87 ~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~~~----------p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l~~~ 153 (373)
+|.||+++..++|+.+| .+|+..-....... .. +++++ ++++|+++....|+.+| .+| ...-...
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~-g~a~~-~~~v~~~t~dg~l~AlD~~TG~~~W~~~~ 145 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNR-GAAIY-GDKVFFGTLDASVVALNKNTGKVVWKKKF 145 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCC-CCEEE-TTEEEEEETTTEEEEEESSSCCEEEEEEC
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCC-ccEEE-CCEEEEEeCCCEEEEEECCCCCEEeeecC
Confidence 79999998766799999 57764322111111 13 55653 67899998777899999 788 4332221
Q ss_pred cC---CccccccceeEEc-CCC--cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE
Q 017317 154 VN---GSRINLADDLIAA-TDG--SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (373)
Q Consensus 154 ~~---~~~~~~~~~l~~~-~dG--~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 212 (373)
.. +......-.+.-+ .+| .+|++....+ ....+.|+.+|..+++...
T Consensus 146 ~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e------------~~~~g~v~alD~~tG~~~W 198 (582)
T 1flg_A 146 ADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDE------------FGVVGRLFARDPDTGEEIW 198 (582)
T ss_dssp SCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGG------------GCCBCEEEEECTTTCCEEE
T ss_pred CCCCcCcccccCCEEeCCCcCCcEEEEEeccccc------------cCCCCEEEEEECCCCCEEe
Confidence 11 0011111112211 123 6777653211 1124788999988877543
No 308
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.89 E-value=0.2 Score=43.88 Aligned_cols=176 Identities=15% Similarity=0.112 Sum_probs=96.2
Q ss_pred CcceEEEecCCCEE-EEecCCeEEEEEcCC---c-eEEeeeecCccccCeEECC--CCcEEE-EECCCcEEEEe-cCC-c
Q 017317 78 GPEDVCVDRNGVLY-TATRDGWIKRLHKNG---T-WENWKLIGGDTLLGITTTQ--ENEILV-CDADKGLLKVT-EEG-V 147 (373)
Q Consensus 78 ~P~~ia~d~~G~l~-v~~~~g~I~~~~~~g---~-~~~~~~~~~~p~~gl~~d~--~g~L~v-a~~~~gl~~~~-~~g-~ 147 (373)
.-.+++++++|+.. ++..++.|..++.++ + ...+....+... .+++.+ +|++++ +...+.+..++ .++ .
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~-~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVMIWKEENGRW 89 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTTEEEEEEBSSSCB
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeE-EEEecCCCcCCEEEEEcCCCEEEEEEcCCCce
Confidence 34678899988766 677899999998432 2 222322233445 788864 366554 45545566666 554 2
Q ss_pred EEEeeccCCccccccceeEEcCC--CcEEEEeCCccccccccccccccccCCceEEEEeCCCCe---EEEeecCCCCcce
Q 017317 148 TVLASHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE---TSILLDSLFFANG 222 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~d--G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~~~~~~~g 222 (373)
..+.. ..+ ....++++++.|+ |.+.++.+. .+.|..+|..++. ...+.......+.
T Consensus 90 ~~~~~-~~~-h~~~v~~v~~~p~~~g~~l~s~s~-----------------d~~v~~wd~~~~~~~~~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 90 SQIAV-HAV-HSASVNSVQWAPHEYGPMLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGVNS 150 (297)
T ss_dssp CCCEE-ECC-CSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEEBCSSSCBCCEEEECCSSCEEE
T ss_pred EEEEE-eec-CCCceeEEEeCcCCCCcEEEEEEC-----------------CCcEEEEEecCCCceeeeeeecccCccce
Confidence 22211 111 1235778999887 766555432 3667777765432 1222222233466
Q ss_pred EEEccC-------------CCEEEEEeCCCCeEEEEEecCCCCcc-e-eEEecCCCCCCCceeECCCC
Q 017317 223 VALSKD-------------EDYLVVCETFKFRCLKYWLKGESKEQ-T-EIFVENLPGGPDNIKLAPDG 275 (373)
Q Consensus 223 i~~~~d-------------g~~l~v~~~~~~~i~~~~~~~~~~~~-~-~~~~~~~~g~p~~i~~d~dG 275 (373)
++|+|+ ++ ++++...++.|..+++....... . ..+. .-......+++++++
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~ 216 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTV 216 (297)
T ss_dssp EEECCCC------------CC-EEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCC
T ss_pred EeecCCcccccccCCCCCCcc-eEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCC
Confidence 788886 34 55555566778888876432111 1 1111 112234567788875
No 309
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=96.87 E-value=0.15 Score=50.72 Aligned_cols=108 Identities=18% Similarity=0.058 Sum_probs=61.5
Q ss_pred ccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc--ceEEEccCCCEEEEEeC
Q 017317 161 LADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA--NGVALSKDEDYLVVCET 237 (373)
Q Consensus 161 ~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~--~gi~~~~dg~~l~v~~~ 237 (373)
...++++.|||+ |.++... .+.....|+.+|.++++... ...+... .+++|++||+.++.+..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~-------------~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~ 187 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKP-------------NAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWL 187 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEE-------------TTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEEC
T ss_pred EEEEEEECCCCCEEEEEECC-------------CCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEe
Confidence 356788999996 4333211 11223579999998877530 1112222 68999999998888764
Q ss_pred C------------CCeEEEEEecCCCCcceeEEecC-CCCCCCceeECCCCC-EEEEEe
Q 017317 238 F------------KFRCLKYWLKGESKEQTEIFVEN-LPGGPDNIKLAPDGS-FWIAIL 282 (373)
Q Consensus 238 ~------------~~~i~~~~~~~~~~~~~~~~~~~-~~g~p~~i~~d~dG~-lwva~~ 282 (373)
. ...|+++++.+.......++... .+....++.+++||+ |.++..
T Consensus 188 d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~ 246 (695)
T 2bkl_A 188 PTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYIL 246 (695)
T ss_dssp CCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEE
T ss_pred cCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEe
Confidence 2 23488888765432222222211 112233577899996 444443
No 310
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.022 Score=54.96 Aligned_cols=176 Identities=9% Similarity=-0.058 Sum_probs=100.2
Q ss_pred cceEEEecC------CCEE-EEecCCeEEEEEc-CCceE------------EeeeecCccccCeEECCCCcEEEEECCCc
Q 017317 79 PEDVCVDRN------GVLY-TATRDGWIKRLHK-NGTWE------------NWKLIGGDTLLGITTTQENEILVCDADKG 138 (373)
Q Consensus 79 P~~ia~d~~------G~l~-v~~~~g~I~~~~~-~g~~~------------~~~~~~~~p~~gl~~d~~g~L~va~~~~g 138 (373)
..++++.|+ +.+. .++.+|.|..++. .+... .+........ ++++.+++.|..+...+.
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~-sv~~s~~~~lasgs~Dgt 288 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLIT-TFDFLSPTTVVCGFKNGF 288 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEE-EEEESSSSEEEEEETTSE
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEE-EEEecCCCeEEEEeCCCE
Confidence 456777764 3454 5778899988883 33211 1111123345 788877777777776566
Q ss_pred EEEEe-cCC-c--EEEeeccCCcccccccee--EEcCCC-cEEEEeCCccccccccccccccccCCceEEEEeCCCCeEE
Q 017317 139 LLKVT-EEG-V--TVLASHVNGSRINLADDL--IAATDG-SIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (373)
Q Consensus 139 l~~~~-~~g-~--~~l~~~~~~~~~~~~~~l--~~~~dG-~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 211 (373)
|..+| .++ . ..+... ...+.+| ++.++| .+.++.+. .+.|..+|..+++..
T Consensus 289 V~lWD~~~~~~~~~~~~~H-----~~~V~sv~~~~s~~g~~~laS~S~-----------------D~tvklWD~~~~~~~ 346 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQVH-----DSYILSVSTAYSDFEDTVVSTVAV-----------------DGYFYIFNPKDIATT 346 (524)
T ss_dssp EEEEETTBCSSCSEEEECS-----SSCEEEEEEECCTTSCCEEEEEET-----------------TSEEEEECGGGHHHH
T ss_pred EEEEECCCCCCceEEeecc-----cccEEEEEEEcCCCCCeEEEEecc-----------------CCeEEEEECCCCCcc
Confidence 66777 544 2 222111 1246777 456777 77776543 467777886544321
Q ss_pred -EeecCC--CCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEE
Q 017317 212 -ILLDSL--FFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAI 281 (373)
Q Consensus 212 -~~~~~~--~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~ 281 (373)
.+.... .....++|+|+++ .+++....+.|..+++..... ...+.. -.+....+++.++|.+.++.
T Consensus 347 ~~~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~~~--~~~l~g-H~~~V~sva~Sp~g~~l~Sg 415 (524)
T 2j04_B 347 KTTVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAAFA--VHPLVS-RETTITAIGVSRLHPMVLAG 415 (524)
T ss_dssp CEEEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCTTC--CEEEEE-CSSCEEEEECCSSCCBCEEE
T ss_pred cccccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECccccc--ceeeec-CCCceEEEEeCCCCCeEEEE
Confidence 111111 1246799999998 466666667788887654321 112221 12345567888888765543
No 311
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.81 E-value=0.042 Score=51.59 Aligned_cols=151 Identities=15% Similarity=0.152 Sum_probs=85.3
Q ss_pred CcceEEEecCCCEEE-----EecCCeEEEEE-cCC-----ce----EEeee---ecCccccCeEECCC-CcEEE-EECCC
Q 017317 78 GPEDVCVDRNGVLYT-----ATRDGWIKRLH-KNG-----TW----ENWKL---IGGDTLLGITTTQE-NEILV-CDADK 137 (373)
Q Consensus 78 ~P~~ia~d~~G~l~v-----~~~~g~I~~~~-~~g-----~~----~~~~~---~~~~p~~gl~~d~~-g~L~v-a~~~~ 137 (373)
...++++.++|...+ ++.++.|..++ .++ +. ..+.. ...... ++++.++ +++++ +...+
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI-DMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE-EEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceE-EEEECCCCCCEEEEEECCC
Confidence 467899999887664 33577888888 221 11 11111 123456 8999987 66655 55555
Q ss_pred cEEEEe-cCCcEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC
Q 017317 138 GLLKVT-EEGVTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS 216 (373)
Q Consensus 138 gl~~~~-~~g~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~ 216 (373)
.+..+| .++....... + ....+.++++.++|...++.+ ..|.|..+|.+......+...
T Consensus 173 ~v~iwD~~~~~~~~~~~--~-~~~~v~~v~wspdg~~lasgs-----------------~dg~v~iwd~~~~~~~~~~~~ 232 (434)
T 2oit_A 173 SIAVLQVTETVKVCATL--P-STVAVTSVCWSPKGKQLAVGK-----------------QNGTVVQYLPTLQEKKVIPCP 232 (434)
T ss_dssp CEEEEEESSSEEEEEEE--C-GGGCEEEEEECTTSSCEEEEE-----------------TTSCEEEECTTCCEEEEECCC
T ss_pred eEEEEEcCCCcceeecc--C-CCCceeEEEEcCCCCEEEEEc-----------------CCCcEEEEccCCcccccccCC
Confidence 677777 5552111111 1 123578899999996544432 247888899873323222211
Q ss_pred CC-------CcceEEEccCCCEEEEEeCCC------CeEEEEEecC
Q 017317 217 LF-------FANGVALSKDEDYLVVCETFK------FRCLKYWLKG 249 (373)
Q Consensus 217 ~~-------~~~gi~~~~dg~~l~v~~~~~------~~i~~~~~~~ 249 (373)
.. ....+++++++.++....... ..+..|++..
T Consensus 233 ~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~ 278 (434)
T 2oit_A 233 PFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPK 278 (434)
T ss_dssp TTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCC
T ss_pred cccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEecc
Confidence 11 235678888876554444333 2366677653
No 312
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.76 E-value=0.1 Score=52.20 Aligned_cols=86 Identities=16% Similarity=0.144 Sum_probs=50.0
Q ss_pred CceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC
Q 017317 197 HGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS 276 (373)
Q Consensus 197 ~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~ 276 (373)
.|.|..+|+.+++............+-.+...+..+|++ +.++.++.||.+..+. ...+.........-+.+..+|+
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g-t~dg~l~a~D~~tG~~--lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEG-SADGRVIAYAADTGEK--LWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEE-CTTSEEEEEETTTCCE--EEEEECSSCCCSCCEEEEETTE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEE-CCCCcEEEEECCCCcc--ceeeeCCCCcccCceEEEECCE
Confidence 378999999999865432221112333566666656665 5678899999754322 1122111111122255567999
Q ss_pred EEEEEecCC
Q 017317 277 FWIAILQLS 285 (373)
Q Consensus 277 lwva~~~~~ 285 (373)
.||+...+.
T Consensus 531 qyv~~~~G~ 539 (689)
T 1yiq_A 531 QYVTFMAGW 539 (689)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 999987653
No 313
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.71 E-value=0.28 Score=48.88 Aligned_cols=105 Identities=12% Similarity=0.091 Sum_probs=59.7
Q ss_pred ccceeEEcCCCc-E-EEEeCCccccccccccccccccCCceEEEEeCCCCeEEEe-ecCCCCcceEEEccCCCEEEEEeC
Q 017317 161 LADDLIAATDGS-I-YFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSIL-LDSLFFANGVALSKDEDYLVVCET 237 (373)
Q Consensus 161 ~~~~l~~~~dG~-l-~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~~gi~~~~dg~~l~v~~~ 237 (373)
...++.+.|||+ | |..+.+ +.....|+.+|.++++.... ... ....+++|+ |++.++++..
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~--------------G~~~~~i~v~dl~tg~~~~~~~~~-~k~~~~~Ws-Dg~~l~y~~~ 193 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLA--------------GSDWREIHLMDVESKQPLETPLKD-VKFSGISWL-GNEGFFYSSY 193 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECS--------------SCCEEEEEEEETTTCSEEEEEEEE-EESCCCEEE-TTTEEEEEES
T ss_pred EEEEEEECCCCCEEEEEEecC--------------CCceEEEEEEECCCCCCCccccCC-ceeccEEEe-CCCEEEEEEe
Confidence 456778999996 3 333322 11224688999988875432 111 113578999 9998888764
Q ss_pred C------------CCeEEEEEecCCCCcceeEEecCC--CCCCCceeECCCCCE-EEEE
Q 017317 238 F------------KFRCLKYWLKGESKEQTEIFVENL--PGGPDNIKLAPDGSF-WIAI 281 (373)
Q Consensus 238 ~------------~~~i~~~~~~~~~~~~~~~~~~~~--~g~p~~i~~d~dG~l-wva~ 281 (373)
. ...|+++++.........++.... +..-.++..++||+. .+..
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~ 252 (693)
T 3iuj_A 194 DKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISA 252 (693)
T ss_dssp SCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEE
T ss_pred cCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEE
Confidence 4 245888876543322222332111 112234678899974 4443
No 314
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=96.60 E-value=0.21 Score=50.21 Aligned_cols=107 Identities=15% Similarity=0.092 Sum_probs=58.9
Q ss_pred ccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCC
Q 017317 161 LADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFK 239 (373)
Q Consensus 161 ~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~ 239 (373)
...++.+.|||+ |.++... .+.....|+.+|.++++............+++|+|| +.++++....
T Consensus 164 ~~~~~~~SPDG~~la~~~~~-------------~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~ 229 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQD-------------GGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAE 229 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEE-------------TTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCC
T ss_pred EEEeEEECCCCCEEEEEEcC-------------CCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecC
Confidence 355788999996 4333211 011124699999988876432111111257899999 8888876432
Q ss_pred -------------CeEEEEEecCCCCcceeEEecCC-CCCCCceeECCCCC-EEEEE
Q 017317 240 -------------FRCLKYWLKGESKEQTEIFVENL-PGGPDNIKLAPDGS-FWIAI 281 (373)
Q Consensus 240 -------------~~i~~~~~~~~~~~~~~~~~~~~-~g~p~~i~~d~dG~-lwva~ 281 (373)
..|+++++.+.......++.... +....++.+++||+ |.++.
T Consensus 230 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~ 286 (741)
T 1yr2_A 230 PKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITS 286 (741)
T ss_dssp C--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEE
T ss_pred cccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEE
Confidence 34777776543222222222111 11234567899997 44444
No 315
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.42 E-value=0.49 Score=43.30 Aligned_cols=185 Identities=10% Similarity=0.005 Sum_probs=90.2
Q ss_pred cceEEEec--------CCCEE-EEecCCeEEEEE-cCCc-eEEeeeecCccccCeEECCCCc--EEEEECCCcEEEEe-c
Q 017317 79 PEDVCVDR--------NGVLY-TATRDGWIKRLH-KNGT-WENWKLIGGDTLLGITTTQENE--ILVCDADKGLLKVT-E 144 (373)
Q Consensus 79 P~~ia~d~--------~G~l~-v~~~~g~I~~~~-~~g~-~~~~~~~~~~p~~gl~~d~~g~--L~va~~~~gl~~~~-~ 144 (373)
-.++++.| +|++. .+..++.|..+| .++. ............ ++++.+++. |..+...+.+..+| .
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~-~v~~~p~~~~~l~~~~~d~~v~~wd~~ 217 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGI-SVQFRPSNPNQLIVGERNGNIRIFDWT 217 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEE-EEEEETTEEEEEEEEETTSEEEEEETT
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcE-EEEECCCCCceEEecCCCCEEEEEECC
Confidence 45577764 56666 566889999998 3443 333333344556 899998873 44455544456666 4
Q ss_pred CC-c-EEEeeccC--------------------CccccccceeEEc-CCCcEEEEeCCccccccccccccccccCCceEE
Q 017317 145 EG-V-TVLASHVN--------------------GSRINLADDLIAA-TDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLL 201 (373)
Q Consensus 145 ~g-~-~~l~~~~~--------------------~~~~~~~~~l~~~-~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~ 201 (373)
.+ . ........ ......+..+.+. +||...++.+. .+.+.
T Consensus 218 t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~-----------------d~~i~ 280 (393)
T 4gq1_A 218 LNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCK-----------------SGAWL 280 (393)
T ss_dssp CCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECT-----------------TSEEE
T ss_pred CCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeC-----------------CCCEE
Confidence 44 1 11100000 0011123445544 67765555332 34555
Q ss_pred EEeCCCCeEEEee-------------------cCCCCcceEEEcc-CCCEEEEEeCCCCeEEEEEecCCCCcceeEEecC
Q 017317 202 KYDPSLNETSILL-------------------DSLFFANGVALSK-DEDYLVVCETFKFRCLKYWLKGESKEQTEIFVEN 261 (373)
Q Consensus 202 ~~d~~~~~~~~~~-------------------~~~~~~~gi~~~~-dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~ 261 (373)
.+|..+++..... .......+..+++ .++.+.++...++.|..++........ ... .
T Consensus 281 vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~--~~~-~ 357 (393)
T 4gq1_A 281 RWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNS--IPI-Q 357 (393)
T ss_dssp EEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCE--EEE-E
T ss_pred EEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEE--Eec-C
Confidence 5554433211100 0011122334444 344455566667788888876433221 122 1
Q ss_pred CCCCCCceeECCCCCEEEEEecC
Q 017317 262 LPGGPDNIKLAPDGSFWIAILQL 284 (373)
Q Consensus 262 ~~g~p~~i~~d~dG~lwva~~~~ 284 (373)
...-...+++++||+++++...+
T Consensus 358 ~~~~V~svafspdG~~LA~as~~ 380 (393)
T 4gq1_A 358 LGMPIVDFCWHQDGSHLAIATEG 380 (393)
T ss_dssp CSSCEEEEEECTTSSEEEEEESS
T ss_pred CCCcEEEEEEcCCCCEEEEEeCC
Confidence 12235678999999977665443
No 316
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=96.41 E-value=0.055 Score=50.77 Aligned_cols=104 Identities=9% Similarity=-0.061 Sum_probs=58.7
Q ss_pred ccceeEEcCCCcEEE----EeCCccccccccccccccccCCceEEEEeCCCC-----eE------EEeec-CCCCcceEE
Q 017317 161 LADDLIAATDGSIYF----SVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-----ET------SILLD-SLFFANGVA 224 (373)
Q Consensus 161 ~~~~l~~~~dG~l~v----~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-----~~------~~~~~-~~~~~~gi~ 224 (373)
.+.+++++++|+..+ +.+ ..+.|..+|..+. +. ..... .......++
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs-----------------~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~ 156 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSE-----------------YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMK 156 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETT-----------------TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEE
T ss_pred cccEEEEcCCCCEEEEEEeccC-----------------CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEE
Confidence 477899999997555 322 2356666664322 00 11111 123457899
Q ss_pred EccCCCEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEEecC
Q 017317 225 LSKDEDYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAILQL 284 (373)
Q Consensus 225 ~~~dg~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~~~~ 284 (373)
|+|+...++++...++.|..+++.... ...... ........++.+++|+ |.++...+
T Consensus 157 ~~p~~~~~las~s~Dg~v~iwD~~~~~--~~~~~~-~~~~~v~~v~wspdg~~lasgs~dg 214 (434)
T 2oit_A 157 WNPTVPSMVAVCLADGSIAVLQVTETV--KVCATL-PSTVAVTSVCWSPKGKQLAVGKQNG 214 (434)
T ss_dssp ECSSCTTEEEEEETTSCEEEEEESSSE--EEEEEE-CGGGCEEEEEECTTSSCEEEEETTS
T ss_pred ECCCCCCEEEEEECCCeEEEEEcCCCc--ceeecc-CCCCceeEEEEcCCCCEEEEEcCCC
Confidence 999843366666667789999876531 111111 1122456788899996 45555444
No 317
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.31 E-value=0.59 Score=42.23 Aligned_cols=50 Identities=16% Similarity=0.109 Sum_probs=33.7
Q ss_pred CceEEEEeCCCCeEEEeecCC-CCcc-eEEEccCCCEEEEEeCCCCeEEEEEe
Q 017317 197 HGKLLKYDPSLNETSILLDSL-FFAN-GVALSKDEDYLVVCETFKFRCLKYWL 247 (373)
Q Consensus 197 ~g~l~~~d~~~~~~~~~~~~~-~~~~-gi~~~~dg~~l~v~~~~~~~i~~~~~ 247 (373)
.+.|..+|..+++......+. .... .++|+|||+ ++++...++.|..++.
T Consensus 304 DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 304 SGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEEEE
T ss_pred CCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEecC
Confidence 467888898888765544432 2233 489999999 4555566777877763
No 318
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.28 E-value=0.081 Score=51.47 Aligned_cols=118 Identities=19% Similarity=0.218 Sum_probs=70.7
Q ss_pred CCcceEEEccCCCEEEEEeCCC---------------------CeEEEEEecCCCC--c--ceeEEec------------
Q 017317 218 FFANGVALSKDEDYLVVCETFK---------------------FRCLKYWLKGESK--E--QTEIFVE------------ 260 (373)
Q Consensus 218 ~~~~gi~~~~dg~~l~v~~~~~---------------------~~i~~~~~~~~~~--~--~~~~~~~------------ 260 (373)
..|.+++++|....+|++.+++ +.|++|..++... . ..+.+..
T Consensus 384 ~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred eccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccc
Confidence 3467899997544599987743 3688887653221 1 1122210
Q ss_pred ---------CCCCCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCCCccEEEEEECC-CCcE
Q 017317 261 ---------NLPGGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPLHKKAAVVNVAA-NGIV 330 (373)
Q Consensus 261 ---------~~~g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~g~v~~~~~-~g~~ 330 (373)
+.-..||||++|++|+|||++-++.+...++. ......++.+++ .|++
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~G~LwI~eDg~~~~~~~~~----------------------~~gnn~~~~~~~~~g~~ 521 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKAGRLWILTDGDSSNAGDFA----------------------GMGNNQMLCADPATGEI 521 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCCEEEEECCCCCCSGGGT----------------------TTCSCEEEEECTTTCCE
T ss_pred ccccccCCCCCccCCcceEECCCCCEEEEecCCCccccccc----------------------ccccceEEEEeCCCCeE
Confidence 01236999999999999999876422111110 111123555664 4777
Q ss_pred EEEEeCCCCceecceeEEEEeC--CEEEEeeC
Q 017317 331 IRKFEDPNGKVMSFVTSALEFD--DHLYLGSL 360 (373)
Q Consensus 331 ~~~~~~~~g~~~~~~~~~~~~~--g~L~vgs~ 360 (373)
.+.+..|.| ..++.+++.+ .+||+.-.
T Consensus 522 ~rf~~~P~g---aE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 522 RRFMVGPIG---CEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEEECCTT---CEEEEEEECTTSSEEEEEEE
T ss_pred EEEEeCCCC---ccCcCeeECCCCCEEEEEEE
Confidence 777777765 3677887763 47887643
No 319
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=96.15 E-value=1.3 Score=44.77 Aligned_cols=148 Identities=11% Similarity=0.077 Sum_probs=81.6
Q ss_pred CcceEEEec--CCCEEEEecCCeEEEEEcCCc-eEEeeeec-------CccccCeEECCC--CcEEEEECC------CcE
Q 017317 78 GPEDVCVDR--NGVLYTATRDGWIKRLHKNGT-WENWKLIG-------GDTLLGITTTQE--NEILVCDAD------KGL 139 (373)
Q Consensus 78 ~P~~ia~d~--~G~l~v~~~~g~I~~~~~~g~-~~~~~~~~-------~~p~~gl~~d~~--g~L~va~~~------~gl 139 (373)
...+|++++ .+.+|+++..++|++-+..|+ ++.+.... .... +|++++. +.+|++... .+|
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~-~ia~dp~~~~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTE-SIALDPNNPDRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEE-EEEEETTEEEEEEEEECSCTTSSCCEE
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCcee-EEEECCCCCCEEEEEeCccCCCcccEE
Confidence 356688887 478999998889998875553 55443211 1244 7888864 468998643 345
Q ss_pred EEEecCC--cEEEeeccC--C-ccc-cccceeEEcCC--CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEE
Q 017317 140 LKVTEEG--VTVLASHVN--G-SRI-NLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETS 211 (373)
Q Consensus 140 ~~~~~~g--~~~l~~~~~--~-~~~-~~~~~l~~~~d--G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 211 (373)
++-+..| .+.+..... + .+. .....|++++. +.+|++.. .+.||+=+-.+...+
T Consensus 95 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~------------------~~gl~~S~DgG~TW~ 156 (789)
T 1sqj_A 95 YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTR------------------TEGIWKSSDRAKTWT 156 (789)
T ss_dssp EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECS------------------SSCEEEESSTTSSCE
T ss_pred EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEec------------------cCCEEEECCCCcccC
Confidence 5544445 444432111 0 011 12346888874 47888642 246776554334444
Q ss_pred EeecCC------CCcceEEEcc-CCCEEEEEeCCCCeEEE
Q 017317 212 ILLDSL------FFANGVALSK-DEDYLVVCETFKFRCLK 244 (373)
Q Consensus 212 ~~~~~~------~~~~gi~~~~-dg~~l~v~~~~~~~i~~ 244 (373)
.+.... .....++++| +.+.+|++......|++
T Consensus 157 ~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~v~~ 196 (789)
T 1sqj_A 157 NVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAPQGMYV 196 (789)
T ss_dssp EETTSCCCCSTTTCEEEEEECTTSTTCEEEEESSTTCEEE
T ss_pred CCccCccccCCCCCeEEEEECCCCCCEEEEEEcCCCeEEE
Confidence 433210 1123466776 44568887643245554
No 320
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=95.56 E-value=2.3 Score=42.85 Aligned_cols=147 Identities=14% Similarity=0.056 Sum_probs=79.6
Q ss_pred CcceEEEec--CCCEEEEecCCeEEEEEcCCc-eEEeeeec------------CccccCeEECC--CCcEEEEEC-----
Q 017317 78 GPEDVCVDR--NGVLYTATRDGWIKRLHKNGT-WENWKLIG------------GDTLLGITTTQ--ENEILVCDA----- 135 (373)
Q Consensus 78 ~P~~ia~d~--~G~l~v~~~~g~I~~~~~~g~-~~~~~~~~------------~~p~~gl~~d~--~g~L~va~~----- 135 (373)
.-.+|+++| .+.+|++...|+|++-+..|+ ++.+.... .... .|++++ .+.+|++..
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~-~ia~dp~~~~~~~~~~g~~~~~ 100 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTE-SIALDPHNPDRLYLAQGDYVQW 100 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEE-EEECCTTCTTCEEEEECSCTTT
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCccccccee-EEEECCCCCCEEEEEecccccC
Confidence 456788887 357899998888988875553 44433211 1234 677886 357999764
Q ss_pred --CCcEEEEecCC--cEEEeeccC-C-c-ccc-ccceeEEcCC--CcEEEEeCCccccccccccccccccCCceEEEEeC
Q 017317 136 --DKGLLKVTEEG--VTVLASHVN-G-S-RIN-LADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDP 205 (373)
Q Consensus 136 --~~gl~~~~~~g--~~~l~~~~~-~-~-~~~-~~~~l~~~~d--G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 205 (373)
..+|++-...| .+.+..... + . ... ....|++++. +.+|++.. .+.||+=+-
T Consensus 101 ~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~------------------~~~l~~S~D 162 (763)
T 3a0f_A 101 DPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR------------------TQGLWRSTD 162 (763)
T ss_dssp CSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS------------------SSCEEEESS
T ss_pred CCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC------------------CCcEEEECC
Confidence 24455544445 555432111 0 0 001 1136888864 67888742 246776543
Q ss_pred CCCeEEEeecCCC-------CcceEEEccC-CCEEEEEeCCCCeEEE
Q 017317 206 SLNETSILLDSLF-------FANGVALSKD-EDYLVVCETFKFRCLK 244 (373)
Q Consensus 206 ~~~~~~~~~~~~~-------~~~gi~~~~d-g~~l~v~~~~~~~i~~ 244 (373)
.+...+.+. .+. ....++++|. .+.+|++......|++
T Consensus 163 gG~TW~~~~-~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g~v~~ 208 (763)
T 3a0f_A 163 RAQTWSRMN-QLPDSSTYGIGIISVIFDPKNVGTAYVASHAVGGLWV 208 (763)
T ss_dssp TTSSCEECT-TSCCCSCTTTCEEEEEECSSSTTCEEEEESSTTCEEE
T ss_pred CCcCccccc-cCcccCCCccceEEEEECCCCCCEEEEEEeCCCeEEE
Confidence 333444432 111 1234667764 3458887654323444
No 321
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=95.37 E-value=1.5 Score=39.58 Aligned_cols=185 Identities=10% Similarity=-0.029 Sum_probs=86.8
Q ss_pred CCCEEEEe---cCCeEEEEE--cCCceEEe-eeecCccccCeEECC---CCcEEEEEC-CCcEEEEe-cCC--cEEEeec
Q 017317 87 NGVLYTAT---RDGWIKRLH--KNGTWENW-KLIGGDTLLGITTTQ---ENEILVCDA-DKGLLKVT-EEG--VTVLASH 153 (373)
Q Consensus 87 ~G~l~v~~---~~g~I~~~~--~~g~~~~~-~~~~~~p~~gl~~d~---~g~L~va~~-~~gl~~~~-~~g--~~~l~~~ 153 (373)
+|++.... .++.|..++ ++|+...- ........ .+++.+ ++.++++.. ++.|..+| ++| +..+...
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~-~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~ 222 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEET-ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHID 222 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSC-EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCcee-eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCC
Confidence 45555443 366666666 55653221 11112222 344444 668887644 44455667 677 4444321
Q ss_pred cCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec----CCCCcceEEEccCC
Q 017317 154 VNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD----SLFFANGVALSKDE 229 (373)
Q Consensus 154 ~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~----~~~~~~gi~~~~dg 229 (373)
......+..+++.|+|.+.++.+.. . ....+..+...+.+..+|+++++...... ......-+..+.++
T Consensus 223 --~~~v~~v~~vafSpdG~~lvs~s~~-~----~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg 295 (356)
T 2w18_A 223 --DSYQASVCHKAYSEMGLLFIVLSHP-C----AKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKD 295 (356)
T ss_dssp --C---CCCEEEEEEETTEEEEEEC-----------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEET
T ss_pred --CcceeeeEEEEECCCCCEEEEeccC-C----CcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCC
Confidence 1112345677899999877653320 0 00123334455677778988876543210 00100111222223
Q ss_pred CEEEEEeCCCCeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCCEEEEEe
Q 017317 230 DYLVVCETFKFRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGSFWIAIL 282 (373)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~lwva~~ 282 (373)
. +.++...++.|..+|+...+. ...+.......-..+++.+||.+.++..
T Consensus 296 ~-~lASgS~DgTIkIWDl~tGk~--l~tL~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 296 H-CAAAILTSGTIAIWDLLLGQC--TALLPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp T-EEEEEETTSCEEEEETTTCSE--EEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred C-EEEEEcCCCcEEEEECCCCcE--EEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence 3 455655667788888754321 1122211111122378999998766543
No 322
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=95.03 E-value=1.5 Score=37.82 Aligned_cols=143 Identities=14% Similarity=0.016 Sum_probs=80.1
Q ss_pred ceEEEecCCCEEEEecCCeEEEEE-cCCceEEeeee---cCccccCeEECCCCcEEEE-ECCCcEEEEe-cCC--cEEEe
Q 017317 80 EDVCVDRNGVLYTATRDGWIKRLH-KNGTWENWKLI---GGDTLLGITTTQENEILVC-DADKGLLKVT-EEG--VTVLA 151 (373)
Q Consensus 80 ~~ia~d~~G~l~v~~~~g~I~~~~-~~g~~~~~~~~---~~~p~~gl~~d~~g~L~va-~~~~gl~~~~-~~g--~~~l~ 151 (373)
..|+..+++.|-+| .++.|..+| .+|+....... ..... .+++.++|++.++ ...+.+..++ +++ ...+.
T Consensus 29 ~~l~WS~~~~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~-~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~ 106 (318)
T 4ggc_A 29 NLVDWSSGNVLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMT 106 (318)
T ss_dssp BCEEECTTSEEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eEEEECCCCEEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEE-EEEECCCCCEEEEEECCCcEEEeecCCceeEEEec
Confidence 34777777644354 478999999 56765433221 22345 8899999986654 4444466666 566 22221
Q ss_pred eccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCe--EEEeecCCCCcceEEEccCC
Q 017317 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE--TSILLDSLFFANGVALSKDE 229 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~--~~~~~~~~~~~~gi~~~~dg 229 (373)
. +......+..++.+.++.+. .+.+..++..+.. ...+.........+++++++
T Consensus 107 ~-------h~~~~~~~~~~~~~l~s~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 107 S-------HSARVGSLSWNSYILSSGSR-----------------SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp C-------CSSCEEEEEEETTEEEEEET-----------------TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred C-------ccceEEEeecCCCEEEEEec-----------------CCceEeeecCCCceeEEEEcCccCceEEEEEcCCC
Confidence 1 11122334445555554332 3455555544332 22233334445678889999
Q ss_pred CEEEEEeCCCCeEEEEEecC
Q 017317 230 DYLVVCETFKFRCLKYWLKG 249 (373)
Q Consensus 230 ~~l~v~~~~~~~i~~~~~~~ 249 (373)
+.++ +...++.|..+++..
T Consensus 163 ~~l~-s~~~d~~i~iwd~~~ 181 (318)
T 4ggc_A 163 RHLA-SGGNDNLVNVWPSAP 181 (318)
T ss_dssp SEEE-EEETTSCEEEEESSC
T ss_pred CEEE-EEecCcceeEEECCC
Confidence 8554 444567788888754
No 323
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=94.92 E-value=3.5 Score=41.32 Aligned_cols=99 Identities=14% Similarity=0.191 Sum_probs=59.3
Q ss_pred CcceEEEecC--CCEEEEecCCeEEEEEcCC-ceEEeeeecC-------ccccCeEECC--CCcEEEEEC---------C
Q 017317 78 GPEDVCVDRN--GVLYTATRDGWIKRLHKNG-TWENWKLIGG-------DTLLGITTTQ--ENEILVCDA---------D 136 (373)
Q Consensus 78 ~P~~ia~d~~--G~l~v~~~~g~I~~~~~~g-~~~~~~~~~~-------~p~~gl~~d~--~g~L~va~~---------~ 136 (373)
....|++++. +.+|+++..|+|++.+..| .++.+....+ ... .|++|+ .+.+|++.. .
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~-~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVE-SIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEE-EEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcc-eEEeCCCCCCEEEEEecccccccccCC
Confidence 4567899874 7899999888999988555 3554432111 234 788886 347999863 1
Q ss_pred CcEEEEecCC--cEEEeeccC-Cc--c-ccccceeEEcCC--CcEEEEe
Q 017317 137 KGLLKVTEEG--VTVLASHVN-GS--R-INLADDLIAATD--GSIYFSV 177 (373)
Q Consensus 137 ~gl~~~~~~g--~~~l~~~~~-~~--~-~~~~~~l~~~~d--G~l~v~~ 177 (373)
.+|++-...| .+.+..... +. + ......|+++|. +.+|++.
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 3465554445 454432111 10 1 112357899875 4788875
No 324
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=94.57 E-value=0.026 Score=51.75 Aligned_cols=59 Identities=12% Similarity=-0.007 Sum_probs=33.8
Q ss_pred CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEec
Q 017317 170 DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLK 248 (373)
Q Consensus 170 dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~ 248 (373)
++.+|+++.. +.|+.+|..+++....... .......+..+++ +|++.+.++.|+.++..
T Consensus 9 ~~~v~~gs~d------------------g~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~ 67 (369)
T 2hz6_A 9 ETLLFVSTLD------------------GSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSK 67 (369)
T ss_dssp TTEEEEEETT------------------SEEEEEETTTCCEEEEEEC-CCSCCCC-----C-CEEECTTTCCEEEC---
T ss_pred CCEEEEEcCC------------------CEEEEEECCCCCEEEEecC-CCceecceEcCCC-EEEEeCCCCEEEEEECC
Confidence 5788888643 7899999888876543322 2222223344555 77776677789999874
No 325
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.53 E-value=3.7 Score=40.38 Aligned_cols=122 Identities=11% Similarity=0.069 Sum_probs=61.7
Q ss_pred EEEecCCCEEE-Ee-cCCeEEEEEc-CCceEEeeeec-CccccCeEECCCCcEEEEECC-------CcEEEEe-cCC-cE
Q 017317 82 VCVDRNGVLYT-AT-RDGWIKRLHK-NGTWENWKLIG-GDTLLGITTTQENEILVCDAD-------KGLLKVT-EEG-VT 148 (373)
Q Consensus 82 ia~d~~G~l~v-~~-~~g~I~~~~~-~g~~~~~~~~~-~~p~~gl~~d~~g~L~va~~~-------~gl~~~~-~~g-~~ 148 (373)
+++..+|.||+ |. ....+.++|+ .++++...... .+-..+.+.-++|++||.... ..+.++| .++ .+
T Consensus 248 ~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 248 ISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred ccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 55667899995 43 3457899994 45565543222 222114455568999986431 2467788 455 55
Q ss_pred EEeeccCCcccccc-ceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEE
Q 017317 149 VLASHVNGSRINLA-DDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSI 212 (373)
Q Consensus 149 ~l~~~~~~~~~~~~-~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 212 (373)
.+... ...++... ...++..++.+|+..... ..++.......+++||+.++....
T Consensus 328 ~~~~~-~~~p~~~~~~~~~~~~~~~iyv~Gg~~--------g~~~~~~~~~~v~~yd~~~~~w~~ 383 (656)
T 1k3i_A 328 SLPNA-KVNPMLTADKQGLYRSDNHAWLFGWKK--------GSVFQAGPSTAMNWYYTSGSGDVK 383 (656)
T ss_dssp EETTS-CSGGGCCCCTTGGGTTTCSCCEEECGG--------GCEEECCSSSEEEEEECSTTCEEE
T ss_pred eCCCc-cccccccccccceeecCCceEEEECCC--------CcEEEecCccceeeeecCCcceee
Confidence 54210 00111100 011222466776654320 011111123578899998776443
No 326
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=94.16 E-value=3.2 Score=37.68 Aligned_cols=133 Identities=11% Similarity=-0.006 Sum_probs=70.3
Q ss_pred EEecCCeEEEEE-cCCceEEee---e---ecCccccCeEECC--------CCcEEEE-ECCCcEEEEe-cCC--cEEEee
Q 017317 92 TATRDGWIKRLH-KNGTWENWK---L---IGGDTLLGITTTQ--------ENEILVC-DADKGLLKVT-EEG--VTVLAS 152 (373)
Q Consensus 92 v~~~~g~I~~~~-~~g~~~~~~---~---~~~~p~~gl~~d~--------~g~L~va-~~~~gl~~~~-~~g--~~~l~~ 152 (373)
.+..++.|..++ ..++..... . ..+... .+++.+ +|++++. ..++.+..+| .++ ...+..
T Consensus 106 s~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~-~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~ 184 (393)
T 4gq1_A 106 CVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVN-DIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYP 184 (393)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEE-EEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEE
T ss_pred EEeCCCcEEEEECCCCccceeeeecccCCCCCceE-EEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecC
Confidence 566788888887 344332211 1 123345 777764 6777665 3445566666 554 222222
Q ss_pred ccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec----------------
Q 017317 153 HVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD---------------- 215 (373)
Q Consensus 153 ~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~---------------- 215 (373)
. ...+..+++.|++. +.++.+ ..+.|..+|..+++......
T Consensus 185 ~-----~~~v~~v~~~p~~~~~l~~~~-----------------~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~ 242 (393)
T 4gq1_A 185 L-----SSPGISVQFRPSNPNQLIVGE-----------------RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTL 242 (393)
T ss_dssp C-----SSCEEEEEEETTEEEEEEEEE-----------------TTSEEEEEETTCCC----------CSCCCSEEEESG
T ss_pred C-----CCCcEEEEECCCCCceEEecC-----------------CCCEEEEEECCCCcccccccccCCcccceEEecccc
Confidence 1 12456889999874 444432 24667777766554221100
Q ss_pred ----------CCCCcceEEEc-cCCCEEEEEeCCCCeEEEEEec
Q 017317 216 ----------SLFFANGVALS-KDEDYLVVCETFKFRCLKYWLK 248 (373)
Q Consensus 216 ----------~~~~~~gi~~~-~dg~~l~v~~~~~~~i~~~~~~ 248 (373)
.......+.++ +|++ .+++...++.+..+++.
T Consensus 243 ~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~ 285 (393)
T 4gq1_A 243 PLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLF 285 (393)
T ss_dssp GGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-
T ss_pred cceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECc
Confidence 00112345665 7888 45555667788888865
No 327
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=93.94 E-value=1.7 Score=43.65 Aligned_cols=106 Identities=14% Similarity=0.054 Sum_probs=59.1
Q ss_pred ccceeEEc-CCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCC-eEEEeecCCC-CcceEEEccCCCEEEEEe
Q 017317 161 LADDLIAA-TDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN-ETSILLDSLF-FANGVALSKDEDYLVVCE 236 (373)
Q Consensus 161 ~~~~l~~~-~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~~~~~~~-~~~gi~~~~dg~~l~v~~ 236 (373)
...+..++ |||+ |.++... .+.....|+.+|.+++ +. +...+. ...+++|++||+.|+++.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~-------------~G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDM-------------SGNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEES-------------SSSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeC-------------CCCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEE
Confidence 34567899 9996 5444321 0112235999998887 52 111111 135789999998888775
Q ss_pred CCC----CeEEEEEecCCCCcceeEEecCCCCCCCceeECCCCC-EEEEE
Q 017317 237 TFK----FRCLKYWLKGESKEQTEIFVENLPGGPDNIKLAPDGS-FWIAI 281 (373)
Q Consensus 237 ~~~----~~i~~~~~~~~~~~~~~~~~~~~~g~p~~i~~d~dG~-lwva~ 281 (373)
... ..|+++++.+.......++......+-.++..++||+ |.+..
T Consensus 240 ~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~ 289 (751)
T 2xe4_A 240 KDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGS 289 (751)
T ss_dssp ECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEE
T ss_pred ECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEe
Confidence 421 3688887765432222333322122333456789997 44444
No 328
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=92.82 E-value=0.59 Score=42.10 Aligned_cols=109 Identities=16% Similarity=0.195 Sum_probs=58.6
Q ss_pred CCCEEEEecCCeEEEEE-cCCceEEeeeec--CccccCeE---ECCCCcEEEEE--CCCcEEEEe-cCC-cEEEeec---
Q 017317 87 NGVLYTATRDGWIKRLH-KNGTWENWKLIG--GDTLLGIT---TTQENEILVCD--ADKGLLKVT-EEG-VTVLASH--- 153 (373)
Q Consensus 87 ~G~l~v~~~~g~I~~~~-~~g~~~~~~~~~--~~p~~gl~---~d~~g~L~va~--~~~gl~~~~-~~g-~~~l~~~--- 153 (373)
+|.+|+++.+|.|+.++ .+|+..-..... ..+. +.. ...+|.+|+.. ..+.|+.++ .+| .+.-...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~-~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLI-EIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSE-ECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcE-EecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 57899999999999999 677643322221 1111 110 01245666663 345577777 566 3321111
Q ss_pred cCCccccccceeEE------cCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee
Q 017317 154 VNGSRINLADDLIA------ATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL 214 (373)
Q Consensus 154 ~~~~~~~~~~~l~~------~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 214 (373)
....+...-....+ ..+|.+|++.. .|+++.+|..+|+.....
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~------------------~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSM------------------RTIMYTINMLNGEIISAF 137 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEE------------------EEEEEEEETTTCCEEEEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEec------------------CCEEEEEECCCCcEEEEE
Confidence 01111111111122 25778898864 378999999988876543
No 329
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=91.56 E-value=7.2 Score=39.07 Aligned_cols=147 Identities=13% Similarity=0.058 Sum_probs=76.8
Q ss_pred ceEEEe-cCCCEE--EEecCC----eEEEEEc-CC-ceEEeeeecCccccCeEECCCCc-EEEEECC-----CcEEEEe-
Q 017317 80 EDVCVD-RNGVLY--TATRDG----WIKRLHK-NG-TWENWKLIGGDTLLGITTTQENE-ILVCDAD-----KGLLKVT- 143 (373)
Q Consensus 80 ~~ia~d-~~G~l~--v~~~~g----~I~~~~~-~g-~~~~~~~~~~~p~~gl~~d~~g~-L~va~~~-----~gl~~~~- 143 (373)
.+..+. |||+.. +.+.+| .|+.++. +| +... ........ ++++.+||+ |+..... ..|++.+
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~~~~~~-~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKVSGTNG-EIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCEEEECS-CCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred eeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccccCcee-eEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 446778 888743 333333 4888884 44 3110 00011234 788999984 5544321 2466666
Q ss_pred cCC-c--EEEeeccCCccccccceeEEcCCCc-EEEEeCCccccccccccccccccCCceEEEEeCCCC--eE--EEeec
Q 017317 144 EEG-V--TVLASHVNGSRINLADDLIAATDGS-IYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLN--ET--SILLD 215 (373)
Q Consensus 144 ~~g-~--~~l~~~~~~~~~~~~~~l~~~~dG~-l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--~~--~~~~~ 215 (373)
.++ . ..+..... . .+..++.+++||+ |+++... .....||.+|.+++ +. +.+..
T Consensus 255 gt~~~~~~lv~~~~~-~--~~~~~~~~SpDg~~l~~~~~~---------------~~~~~l~~~d~~~~~~~~~~~~l~~ 316 (751)
T 2xe4_A 255 GKLQSEDVCLYEEHN-P--LFSAFMYKAADTNTLCIGSQS---------------PETAEVHLLDLRKGNAHNTLEIVRP 316 (751)
T ss_dssp TSCGGGCEEEEECCC-T--TCEEEEEECTTSSEEEEEEEC---------------SSCEEEEEEESSSCTTCCCEEESSC
T ss_pred CCCchhcEEEEecCC-C--ceEEEEEECCCCCEEEEEecC---------------CCCceEEEEECCCCCCCceeEEeec
Confidence 444 2 23322211 1 1234678899995 5555422 12357899988764 33 44433
Q ss_pred CCCCcceEEEccC---CCEEEEEeCC----CCeEEEEEecC
Q 017317 216 SLFFANGVALSKD---EDYLVVCETF----KFRCLKYWLKG 249 (373)
Q Consensus 216 ~~~~~~gi~~~~d---g~~l~v~~~~----~~~i~~~~~~~ 249 (373)
.. .+..++++ |+.+|+.... +.+|+++++++
T Consensus 317 ~~---~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 317 RE---KGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CC---TTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CC---CCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 22 23333344 7767766432 45888888754
No 330
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=90.25 E-value=15 Score=36.58 Aligned_cols=118 Identities=11% Similarity=0.087 Sum_probs=66.5
Q ss_pred ccccCeEECCC--CcEEEEECCCcEEEEecCC--cEEEeeccCCc--cccccceeEEcCC--CcEEEEeCCccccccccc
Q 017317 117 DTLLGITTTQE--NEILVCDADKGLLKVTEEG--VTVLASHVNGS--RINLADDLIAATD--GSIYFSVASTKFGLHNWG 188 (373)
Q Consensus 117 ~p~~gl~~d~~--g~L~va~~~~gl~~~~~~g--~~~l~~~~~~~--~~~~~~~l~~~~d--G~l~v~~~~~~~~~~~~~ 188 (373)
+.. +|++++. +.+|++....+|++.+..| .+.+....... ....+.+|++||. +.+|++...... .+
T Consensus 24 ~i~-~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~---~~- 98 (737)
T 2cn3_A 24 FMP-GIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTN---DW- 98 (737)
T ss_dssp CCC-EEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSS---SS-
T ss_pred eee-EEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccccc---cc-
Confidence 667 8999865 6799987667899887555 55543311100 1234678999983 589998642100 00
Q ss_pred cccccccCCceEEEEeCCCCeEEEeecCCC---------CcceEEEccC-CCEEEEEeCCCCeEEE
Q 017317 189 LDLLEAKPHGKLLKYDPSLNETSILLDSLF---------FANGVALSKD-EDYLVVCETFKFRCLK 244 (373)
Q Consensus 189 ~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~---------~~~gi~~~~d-g~~l~v~~~~~~~i~~ 244 (373)
....++|++=.-.++..+.+..... ....++++|. .+.+|+.......|++
T Consensus 99 -----~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~gl~~ 159 (737)
T 2cn3_A 99 -----LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGNGLWR 159 (737)
T ss_dssp -----SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTCCEEE
T ss_pred -----ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCCcEEE
Confidence 0013567776544444554432211 1257889875 3557776422245654
No 331
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=89.65 E-value=5.7 Score=39.02 Aligned_cols=111 Identities=13% Similarity=-0.002 Sum_probs=64.7
Q ss_pred CeEECC-CCcEEEEECC------------CcEEEEe-cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCcccccc
Q 017317 121 GITTTQ-ENEILVCDAD------------KGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLH 185 (373)
Q Consensus 121 gl~~d~-~g~L~va~~~------------~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~ 185 (373)
+.++.+ +|+||+.... ..+..+| .++ .+.+.... ........++++..+|.||+..+.
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~-~~~~~~~~~~~~~~~g~lyv~GG~------ 262 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTV-TKHDMFCPGISMDGNGQIVVTGGN------ 262 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEE-CSCCCSSCEEEECTTSCEEEECSS------
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccC-CCCCCccccccCCCCCCEEEeCCC------
Confidence 556655 8899986321 1256677 455 43332211 111123345677789999998643
Q ss_pred ccccccccccCCceEEEEeCCCCeEEEeecC--CCCcceEEEccCCCEEEEEeC-CC-----CeEEEEEecC
Q 017317 186 NWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LFFANGVALSKDEDYLVVCET-FK-----FRCLKYWLKG 249 (373)
Q Consensus 186 ~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~~gi~~~~dg~~l~v~~~-~~-----~~i~~~~~~~ 249 (373)
....+++||+.+++.+.+..- -+.-...++.++++ +|+... .. +.+.+||...
T Consensus 263 ----------~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~-iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 263 ----------DAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGR-VFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp ----------STTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSC-EEEECCCCCSSSCCCCEEEEETTT
T ss_pred ----------CCCceEEecCcCCceeECCCCCccccccceEEecCCe-EEEEeCcccCCcccccceEeCCCC
Confidence 123699999998887765321 11224566667887 777754 22 4688888643
No 332
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=87.71 E-value=13 Score=32.11 Aligned_cols=143 Identities=13% Similarity=0.027 Sum_probs=73.6
Q ss_pred CCEE-EEec--CCeEEEEE-cCCceEEeeeecC-ccccCeEECCCCcEEEEEC-----CCcEEEEe-cCC-cEEEeeccC
Q 017317 88 GVLY-TATR--DGWIKRLH-KNGTWENWKLIGG-DTLLGITTTQENEILVCDA-----DKGLLKVT-EEG-VTVLASHVN 155 (373)
Q Consensus 88 G~l~-v~~~--~g~I~~~~-~~g~~~~~~~~~~-~p~~gl~~d~~g~L~va~~-----~~gl~~~~-~~g-~~~l~~~~~ 155 (373)
+.|| +|.. ...+.++| ..++++.....+. +...+++. -++.||+... ...+.++| .++ .+.+... +
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~-p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP-P 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC-S
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC-C
Confidence 4556 4432 45688888 4455665543222 11102333 3678888632 13477888 555 5555332 1
Q ss_pred CccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc---ceEEEccCCCEE
Q 017317 156 GSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVALSKDEDYL 232 (373)
Q Consensus 156 ~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~---~gi~~~~dg~~l 232 (373)
... .-..++ .-++.||+..+... .......+++||+.+++.+.+.. ...+ ...+. -++ .+
T Consensus 90 ~~r--~~~~~~-~~~~~iyv~GG~~~-----------~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~i 152 (306)
T 3ii7_A 90 TPR--DSLAAC-AAEGKIYTSGGSEV-----------GNSALYLFECYDTRTESWHTKPS-MLTQRCSHGMVE-ANG-LI 152 (306)
T ss_dssp SCC--BSCEEE-EETTEEEEECCBBT-----------TBSCCCCEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETT-EE
T ss_pred ccc--cceeEE-EECCEEEEECCCCC-----------CCcEeeeEEEEeCCCCceEeCCC-CcCCcceeEEEE-ECC-EE
Confidence 111 111222 23788998754210 11223579999999888876532 2222 22222 244 48
Q ss_pred EEEeCC---------CCeEEEEEecC
Q 017317 233 VVCETF---------KFRCLKYWLKG 249 (373)
Q Consensus 233 ~v~~~~---------~~~i~~~~~~~ 249 (373)
|+.... .+.+++|+...
T Consensus 153 yv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 153 YVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp EEECCEESCTTTCEECCCEEEEETTT
T ss_pred EEECCCCCCCCcccccceEEEeCCCC
Confidence 886531 35588888654
No 333
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=87.48 E-value=26 Score=35.32 Aligned_cols=115 Identities=9% Similarity=0.049 Sum_probs=64.5
Q ss_pred CccccCeEECCC--CcEEEEECCCcEEEEecCC--cEEEeeccCCc--cccccceeEEcCC--CcEEEEeCCcccccccc
Q 017317 116 GDTLLGITTTQE--NEILVCDADKGLLKVTEEG--VTVLASHVNGS--RINLADDLIAATD--GSIYFSVASTKFGLHNW 187 (373)
Q Consensus 116 ~~p~~gl~~d~~--g~L~va~~~~gl~~~~~~g--~~~l~~~~~~~--~~~~~~~l~~~~d--G~l~v~~~~~~~~~~~~ 187 (373)
++.. +|++++. +.+|++....+|++-+..| .+.+....... ....+.+|++++. +.+|++.....
T Consensus 15 g~i~-~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~------ 87 (789)
T 1sqj_A 15 GYIT-GIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYV------ 87 (789)
T ss_dssp SCEE-EEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCT------
T ss_pred CcEE-EEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccC------
Confidence 4566 8888864 5799988767888877555 45443211100 1235678999974 47898753200
Q ss_pred ccccccccCCceEEEEeCCCCeEEEeecCCC---------CcceEEEccC-CCEEEEEeCCCCeEEE
Q 017317 188 GLDLLEAKPHGKLLKYDPSLNETSILLDSLF---------FANGVALSKD-EDYLVVCETFKFRCLK 244 (373)
Q Consensus 188 ~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~---------~~~gi~~~~d-g~~l~v~~~~~~~i~~ 244 (373)
....+.|++=+-.+...+.+...+. ....++++|. .+.+|+.. ....|++
T Consensus 88 ------~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~-~~~gl~~ 147 (789)
T 1sqj_A 88 ------GDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT-RTEGIWK 147 (789)
T ss_dssp ------TSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC-SSSCEEE
T ss_pred ------CCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe-ccCCEEE
Confidence 0001567776544445555432211 1246888874 34566654 3345654
No 334
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=86.78 E-value=11 Score=37.94 Aligned_cols=151 Identities=14% Similarity=0.014 Sum_probs=77.0
Q ss_pred ceEEEec--CCCEEEEecCCeEEEEEcCC-ceEEeeee-c---CccccCeEEC--CCCcEEEEECCCcEEEEecCC--cE
Q 017317 80 EDVCVDR--NGVLYTATRDGWIKRLHKNG-TWENWKLI-G---GDTLLGITTT--QENEILVCDADKGLLKVTEEG--VT 148 (373)
Q Consensus 80 ~~ia~d~--~G~l~v~~~~g~I~~~~~~g-~~~~~~~~-~---~~p~~gl~~d--~~g~L~va~~~~gl~~~~~~g--~~ 148 (373)
..+++|+ .+.+|+++ ++.|++-...| .++.+... + .... -|.+. .++.||++....+|++-+..| .+
T Consensus 591 ~~i~~d~~~~~~~y~g~-~g~v~~S~DgG~tW~~~~~~lp~~~~~~~-~i~~~~~~~~~l~~~~~~~~l~~S~D~G~tW~ 668 (763)
T 3a0f_A 591 TGIAADRVQANTFYVYV-EGDFFVSTDGGKSYTKKGNGLPCCWTYTG-TPVTSNLRAGELWVSVKGVGIYHSTDFGNTFT 668 (763)
T ss_dssp SCEEECSSSTTCEEEEE-TTEEEEESSTTSBCEEECBTSCCSSCCCE-EEEECSSSTTCEEEEETTTEEEEESSTTSBCE
T ss_pred ceEEEeccCCCEEEEEc-CCCEEEEeCCCcCccccccCCCcccCccc-cEEECCCCCCcEEEEcCCCeEEEEcCCCCCce
Confidence 3677876 56788884 67777654333 34444221 1 1122 15555 367899998766777766555 55
Q ss_pred EEeeccCCcccc--ccceeEEc-C-CCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeec---CCCCcc
Q 017317 149 VLASHVNGSRIN--LADDLIAA-T-DGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLD---SLFFAN 221 (373)
Q Consensus 149 ~l~~~~~~~~~~--~~~~l~~~-~-dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~---~~~~~~ 221 (373)
.+.. ....... .-..++.. + ...||+.... +....++||+-+-.+...+.+.. .+..+.
T Consensus 669 ~~~~-~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~-------------~~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~ 734 (763)
T 3a0f_A 669 ALAG-SGSSLNPAVFSIGAPQTPNATETLFLWGIP-------------SASQPEGLYMSTDNGGLWTRLNDDAHNYGGAT 734 (763)
T ss_dssp ECTT-BTTTBEEEEEEEECCSSTTSSCEEEEEEEC-------------STTSCSEEEEESSTTSCCEECSCTTCCTBCEE
T ss_pred EccC-CCcccccceeEEeeecCCCCCceEEEEEEc-------------ccCCCcEEEEeCCCCCCcEeccCccccCCCcc
Confidence 5431 1111000 00011222 2 2468876400 00123678887755555666542 233333
Q ss_pred eEEEccCC-CEEEEEeCCCCeEEEEEe
Q 017317 222 GVALSKDE-DYLVVCETFKFRCLKYWL 247 (373)
Q Consensus 222 gi~~~~dg-~~l~v~~~~~~~i~~~~~ 247 (373)
.|++++.. ..||++..+ .+|+.-++
T Consensus 735 ~i~~~p~~~~~v~~~T~G-rGi~~g~~ 760 (763)
T 3a0f_A 735 VISGDPRIYGRVYIGMNG-RGIICAQA 760 (763)
T ss_dssp EEEECTTSTTEEEEEEBS-SCEEEEES
T ss_pred eEEeCCCCCCEEEEeCCC-CeEEEEec
Confidence 57777743 347777544 45665443
No 335
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.90 E-value=17 Score=31.59 Aligned_cols=208 Identities=13% Similarity=-0.009 Sum_probs=99.4
Q ss_pred CeEEEEEc-CCceEEeeeec---CccccCeEECCCCcEEEEECC--------C----cEEEEe-cCC-cEEEeeccCCcc
Q 017317 97 GWIKRLHK-NGTWENWKLIG---GDTLLGITTTQENEILVCDAD--------K----GLLKVT-EEG-VTVLASHVNGSR 158 (373)
Q Consensus 97 g~I~~~~~-~g~~~~~~~~~---~~p~~gl~~d~~g~L~va~~~--------~----gl~~~~-~~g-~~~l~~~~~~~~ 158 (373)
..+..+|+ .+++.. ...+ .+...+++. .++.||+.... . .++++| .++ .+.+... +...
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r 89 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVT-KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL-PSPR 89 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEEC-TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB-SSCE
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEE-ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCC-Ccch
Confidence 46888884 445543 2211 122213333 46788875321 0 166777 455 5444321 1111
Q ss_pred ccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc---ceEEEccCCCEEEEE
Q 017317 159 INLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVALSKDEDYLVVC 235 (373)
Q Consensus 159 ~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~---~gi~~~~dg~~l~v~ 235 (373)
.-..++. -++.||+..+.... ........+++||+.+++.+.+.. ...+ ...+. -++ .+|+.
T Consensus 90 --~~~~~~~-~~~~lyv~GG~~~~---------~~~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~ 154 (315)
T 4asc_A 90 --CLFGLGE-ALNSIYVVGGREIK---------DGERCLDSVMCYDRLSFKWGESDP-LPYVVYGHTVLS-HMD-LVYVI 154 (315)
T ss_dssp --ESCEEEE-ETTEEEEECCEESS---------TTCCBCCCEEEEETTTTEEEECCC-CSSCCBSCEEEE-ETT-EEEEE
T ss_pred --hceeEEE-ECCEEEEEeCCcCC---------CCCcccceEEEECCCCCcEeECCC-CCCcccceeEEE-ECC-EEEEE
Confidence 1112222 37789987542000 001233579999999888876543 2222 22332 344 48887
Q ss_pred eCC------CCeEEEEEecCCCCcceeEEecCCC-CCCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchh
Q 017317 236 ETF------KFRCLKYWLKGESKEQTEIFVENLP-GGPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKL 308 (373)
Q Consensus 236 ~~~------~~~i~~~~~~~~~~~~~~~~~~~~~-g~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 308 (373)
... .+.+++|+.... +..... ..+ .+-..-+..-+|+||+......
T Consensus 155 GG~~~~~~~~~~~~~yd~~~~---~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~----------------------- 207 (315)
T 4asc_A 155 GGKGSDRKCLNKMCVYDPKKF---EWKELA-PMQTARSLFGATVHDGRIIVAAGVTD----------------------- 207 (315)
T ss_dssp CCBCTTSCBCCCEEEEETTTT---EEEECC-CCSSCCBSCEEEEETTEEEEEEEECS-----------------------
T ss_pred eCCCCCCcccceEEEEeCCCC---eEEECC-CCCCchhceEEEEECCEEEEEeccCC-----------------------
Confidence 543 246888886532 222211 221 1111122223678887643221
Q ss_pred hhhccCCCccEEEEEECCCCcEEEEEeC-CCCceecceeEEEEeCCEEEEe
Q 017317 309 IKLVAPLHKKAAVVNVAANGIVIRKFED-PNGKVMSFVTSALEFDDHLYLG 358 (373)
Q Consensus 309 ~~~~~~~~~~g~v~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~vg 358 (373)
......+..||++.+....+.. +..+ ....+...+++||+-
T Consensus 208 ------~~~~~~~~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~l~v~ 249 (315)
T 4asc_A 208 ------TGLTSSAEVYSITDNKWAPFEAFPQER---SSLSLVSLVGTLYAI 249 (315)
T ss_dssp ------SSEEEEEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEE
T ss_pred ------CCccceEEEEECCCCeEEECCCCCCcc---cceeEEEECCEEEEE
Confidence 1112347888987776666643 2222 122333446777763
No 336
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=84.63 E-value=33 Score=33.91 Aligned_cols=148 Identities=10% Similarity=0.070 Sum_probs=82.5
Q ss_pred cCCCEEE-Eec----CCeEEEEE-cCCceEEee-e------ecCccccCeEECC-CCcEEEEECC-------CcEEEEe-
Q 017317 86 RNGVLYT-ATR----DGWIKRLH-KNGTWENWK-L------IGGDTLLGITTTQ-ENEILVCDAD-------KGLLKVT- 143 (373)
Q Consensus 86 ~~G~l~v-~~~----~g~I~~~~-~~g~~~~~~-~------~~~~p~~gl~~d~-~g~L~va~~~-------~gl~~~~- 143 (373)
-++.||+ |.. ...+++++ .+++++... . ...+...+++... +|.|||.... ..++++|
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 4788885 432 24578888 456676665 2 1122111344433 7889986321 2477888
Q ss_pred cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC--CC--
Q 017317 144 EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS--LF-- 218 (373)
Q Consensus 144 ~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~-- 218 (373)
.+. .+.+..... ...-...+.-.+|.||+..+.. ..+.+++||+.+++++.+... ..
T Consensus 476 ~t~~W~~~~~~p~---~R~~h~~~~~~~~~iyv~GG~~---------------~~~~v~~yd~~t~~W~~~~~~g~~p~~ 537 (695)
T 2zwa_A 476 KTREWSMIKSLSH---TRFRHSACSLPDGNVLILGGVT---------------EGPAMLLYNVTEEIFKDVTPKDEFFQN 537 (695)
T ss_dssp TTTEEEECCCCSB---CCBSCEEEECTTSCEEEECCBC---------------SSCSEEEEETTTTEEEECCCSSGGGGS
T ss_pred CCCcEEECCCCCC---CcccceEEEEcCCEEEEECCCC---------------CCCCEEEEECCCCceEEccCCCCCCCc
Confidence 555 555432111 1122233443488999975421 111699999999988876532 11
Q ss_pred --CcceEEEccCCCEEEEEeCC-------CCeEEEEEecCCC
Q 017317 219 --FANGVALSKDEDYLVVCETF-------KFRCLKYWLKGES 251 (373)
Q Consensus 219 --~~~gi~~~~dg~~l~v~~~~-------~~~i~~~~~~~~~ 251 (373)
....+++..+.+.+|+.... .+.+++|+.....
T Consensus 538 r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 538 SLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 12235556553558887532 2568999976543
No 337
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=84.62 E-value=18 Score=30.96 Aligned_cols=143 Identities=18% Similarity=0.206 Sum_probs=75.6
Q ss_pred CCCEEE-Eec-----CCeEEEEE-cCCc---eEEeeeecC-ccccCeEECCCCcEEEEEC------CCcEEEEe-cCC-c
Q 017317 87 NGVLYT-ATR-----DGWIKRLH-KNGT---WENWKLIGG-DTLLGITTTQENEILVCDA------DKGLLKVT-EEG-V 147 (373)
Q Consensus 87 ~G~l~v-~~~-----~g~I~~~~-~~g~---~~~~~~~~~-~p~~gl~~d~~g~L~va~~------~~gl~~~~-~~g-~ 147 (373)
++.||+ |.. ...+++++ .+++ ++.....+. +...+++. -+++||+... ...+.++| .+. .
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 678884 432 24688898 4455 665543221 21102333 3678998632 12477888 555 5
Q ss_pred EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc---ceEE
Q 017317 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVA 224 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~---~gi~ 224 (373)
+.+...... . .-..++. -++.||+..+... ......+++||+.+++.+.+.. ...+ ...+
T Consensus 141 ~~~~~~p~~--r-~~~~~~~-~~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~ 203 (301)
T 2vpj_A 141 SMLGDMQTA--R-EGAGLVV-ASGVIYCLGGYDG------------LNILNSVEKYDPHTGHWTNVTP-MATKRSGAGVA 203 (301)
T ss_dssp EEEEECSSC--C-BSCEEEE-ETTEEEEECCBCS------------SCBCCCEEEEETTTTEEEEECC-CSSCCBSCEEE
T ss_pred EECCCCCCC--c-ccceEEE-ECCEEEEECCCCC------------CcccceEEEEeCCCCcEEeCCC-CCcccccceEE
Confidence 555432111 1 1112222 3788998754210 0123579999999888877632 2222 1222
Q ss_pred EccCCCEEEEEeCC-----CCeEEEEEecC
Q 017317 225 LSKDEDYLVVCETF-----KFRCLKYWLKG 249 (373)
Q Consensus 225 ~~~dg~~l~v~~~~-----~~~i~~~~~~~ 249 (373)
.. + +.+|+.... .+.+++|+...
T Consensus 204 ~~-~-~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 204 LL-N-DHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp EE-T-TEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EE-C-CEEEEEeCCCCCcccceEEEEeCCC
Confidence 22 3 358877532 24688898654
No 338
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=83.71 E-value=26 Score=31.95 Aligned_cols=128 Identities=9% Similarity=0.122 Sum_probs=75.2
Q ss_pred cCCcceEEEecCCCEEEEecCCeEEEEEcCC--ceEEeeeecCccccCeEECCCCcEEEEECCCcEEEEe-cCC-cEEEe
Q 017317 76 LNGPEDVCVDRNGVLYTATRDGWIKRLHKNG--TWENWKLIGGDTLLGITTTQENEILVCDADKGLLKVT-EEG-VTVLA 151 (373)
Q Consensus 76 ~~~P~~ia~d~~G~l~v~~~~g~I~~~~~~g--~~~~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~-~~g-~~~l~ 151 (373)
+..+..|++ .+..|+++ .++.|..++... +............ .+..-+. ++.++...+.|+.++ .++ ...+.
T Consensus 87 lp~V~~l~f-d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~-~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~~~ 162 (388)
T 1xip_A 87 IPDVIFVCF-HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVF-QLKNVNN-TLVILNSVNDLSALDLRTKSTKQLA 162 (388)
T ss_dssp CTTEEEEEE-ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEE-EEEECSS-EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCeeEEEE-CCCEEEEE-cCCcEEEEEchhhhccCccceeeccee-eEEecCC-CEEEEECCCCEEEEEccCCcccccc
Confidence 344788899 45667777 778999998321 1111111112223 4444332 366676666677777 555 43321
Q ss_pred eccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeE--E-Ee------ec---CCCC
Q 017317 152 SHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNET--S-IL------LD---SLFF 219 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~--~-~~------~~---~~~~ 219 (373)
..+.++++.++| +.++.. +|.+..|++++++. . .+ .+ ....
T Consensus 163 --------~~Vs~v~WSpkG-~~vg~~------------------dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~ 215 (388)
T 1xip_A 163 --------QNVTSFDVTNSQ-LAVLLK------------------DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYS 215 (388)
T ss_dssp --------ESEEEEEECSSE-EEEEET------------------TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSE
T ss_pred --------CCceEEEEcCCc-eEEEEc------------------CCcEEEEcCCCccccccceecCCcccccccCCCee
Confidence 246789999999 555543 36677778877764 2 23 11 2244
Q ss_pred cceEEEccCCCEEEE
Q 017317 220 ANGVALSKDEDYLVV 234 (373)
Q Consensus 220 ~~gi~~~~dg~~l~v 234 (373)
...|.|.+++.++.+
T Consensus 216 V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 216 PLSVTILSPQDFLAV 230 (388)
T ss_dssp EEEEEESSSSEEEEE
T ss_pred EEEEEEecCCeEEEE
Confidence 567888888875554
No 339
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=82.83 E-value=23 Score=30.63 Aligned_cols=143 Identities=17% Similarity=0.176 Sum_probs=72.2
Q ss_pred CCCEEE-Ee----cCCeEEEEEc-CCceEEeeeecC-ccccCeEECCCCcEEEEECC----------CcEEEEe-cCC-c
Q 017317 87 NGVLYT-AT----RDGWIKRLHK-NGTWENWKLIGG-DTLLGITTTQENEILVCDAD----------KGLLKVT-EEG-V 147 (373)
Q Consensus 87 ~G~l~v-~~----~~g~I~~~~~-~g~~~~~~~~~~-~p~~gl~~d~~g~L~va~~~----------~gl~~~~-~~g-~ 147 (373)
++.||+ |. ....+.++++ .++++.....+. +...+++. -++.||+.... ..++++| .+. .
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W 102 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW 102 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeE
Confidence 456663 32 1245788883 455655432221 11103333 36788886321 2477788 455 5
Q ss_pred EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc---ceEE
Q 017317 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVA 224 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~---~gi~ 224 (373)
+.+..... + ..-..++. -+|.||+..+.. .......+++||+.+++.+.+.. +..+ ...+
T Consensus 103 ~~~~~~p~--~-r~~~~~~~-~~~~iyv~GG~~------------~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~ 165 (308)
T 1zgk_A 103 SPCAPMSV--P-RNRIGVGV-IDGHIYAVGGSH------------GCIHHNSVERYEPERDEWHLVAP-MLTRRIGVGVA 165 (308)
T ss_dssp EECCCCSS--C-CBTCEEEE-ETTEEEEECCEE------------TTEECCCEEEEETTTTEEEECCC-CSSCCBSCEEE
T ss_pred eECCCCCc--C-ccccEEEE-ECCEEEEEcCCC------------CCcccccEEEECCCCCeEeECCC-CCccccceEEE
Confidence 54432111 1 11112222 378899874321 01123469999999888877543 2221 2233
Q ss_pred EccCCCEEEEEeCC-----CCeEEEEEecC
Q 017317 225 LSKDEDYLVVCETF-----KFRCLKYWLKG 249 (373)
Q Consensus 225 ~~~dg~~l~v~~~~-----~~~i~~~~~~~ 249 (373)
.. + +.+|+.... .+.+++|+...
T Consensus 166 ~~-~-~~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 166 VL-N-RLLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp EE-T-TEEEEECCBCSSCBCCCEEEEETTT
T ss_pred EE-C-CEEEEEeCCCCCCcCceEEEEeCCC
Confidence 32 3 358887432 24688888654
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=82.44 E-value=4.1 Score=39.15 Aligned_cols=85 Identities=15% Similarity=0.164 Sum_probs=58.2
Q ss_pred eEEEEeCCC-----CeEEEeecCCCCcceEEEccCCCEEEEEeCCCCeEEEEEecC------CCC-cc-eeEEecC-CCC
Q 017317 199 KLLKYDPSL-----NETSILLDSLFFANGVALSKDEDYLVVCETFKFRCLKYWLKG------ESK-EQ-TEIFVEN-LPG 264 (373)
Q Consensus 199 ~l~~~d~~~-----~~~~~~~~~~~~~~gi~~~~dg~~l~v~~~~~~~i~~~~~~~------~~~-~~-~~~~~~~-~~g 264 (373)
++-.+|... .....+...-..|+|+.++|||++++++.-....+..|+.+- .+. .. .....+. +.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 466777754 123344455678999999999999999999999999998651 111 11 1112222 223
Q ss_pred CCCceeECCCCCEEEEEec
Q 017317 265 GPDNIKLAPDGSFWIAILQ 283 (373)
Q Consensus 265 ~p~~i~~d~dG~lwva~~~ 283 (373)
.|-..++|.+|+.|.+..-
T Consensus 379 GPlHt~Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFI 397 (638)
T ss_dssp CEEEEEECSSSEEEEEETT
T ss_pred cccEEEECCCCceEeeeee
Confidence 5888999999999988753
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=80.20 E-value=30 Score=30.42 Aligned_cols=155 Identities=14% Similarity=0.060 Sum_probs=76.9
Q ss_pred CCCEEE-Ee-cCCeEEEEEcC---CceEEeeeec--CccccCeEECCCCcEEEEECC-----------CcEEEEe-cCC-
Q 017317 87 NGVLYT-AT-RDGWIKRLHKN---GTWENWKLIG--GDTLLGITTTQENEILVCDAD-----------KGLLKVT-EEG- 146 (373)
Q Consensus 87 ~G~l~v-~~-~~g~I~~~~~~---g~~~~~~~~~--~~p~~gl~~d~~g~L~va~~~-----------~gl~~~~-~~g- 146 (373)
++.||+ |. ....+++++.. .+++.....+ .+...+++. -+++|||.... ..++++| .+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 788995 32 44579999953 5666654433 222113333 36789985321 2477788 455
Q ss_pred cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccc----------------------cccccccCCceEEEEe
Q 017317 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWG----------------------LDLLEAKPHGKLLKYD 204 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~----------------------~~~~~~~~~g~l~~~d 204 (373)
.+.+....+ . ...-..++. -++.||+..+.......... ...........+++||
T Consensus 98 W~~~~~~~p-~-~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd 174 (357)
T 2uvk_A 98 WVKLMSHAP-M-GMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFD 174 (357)
T ss_dssp EEECSCCCS-S-CCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEE
T ss_pred EEECCCCCC-c-ccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEe
Confidence 555433210 1 111122333 67899987543100000000 0000001235899999
Q ss_pred CCCCeEEEeecCCC--Cc-ceEEEccCCCEEEEEeCC------CCeEEEEEe
Q 017317 205 PSLNETSILLDSLF--FA-NGVALSKDEDYLVVCETF------KFRCLKYWL 247 (373)
Q Consensus 205 ~~~~~~~~~~~~~~--~~-~gi~~~~dg~~l~v~~~~------~~~i~~~~~ 247 (373)
+.+.+.+.+..-.. .. .+++.. ++.+|+.... ...+++|++
T Consensus 175 ~~~~~W~~~~~~p~~~~~~~~~~~~--~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 175 PSTQQWSYAGESPWYGTAGAAVVNK--GDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp TTTTEEEEEEECSSCCCBSCEEEEE--TTEEEEECCEEETTEECCCEEEEEC
T ss_pred CCCCcEEECCCCCCCCcccccEEEE--CCEEEEEeeecCCCcccCceEEEEe
Confidence 99988877643211 11 233332 3458877421 345777876
No 342
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=79.26 E-value=37 Score=30.87 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=75.7
Q ss_pred CCcceEEEecCCCEE-EEecCCeEEEEE-cCCc---------eE--EeeeecCccccCeEECCCCcEEEEECCCcEEEEe
Q 017317 77 NGPEDVCVDRNGVLY-TATRDGWIKRLH-KNGT---------WE--NWKLIGGDTLLGITTTQENEILVCDADKGLLKVT 143 (373)
Q Consensus 77 ~~P~~ia~d~~G~l~-v~~~~g~I~~~~-~~g~---------~~--~~~~~~~~p~~gl~~d~~g~L~va~~~~gl~~~~ 143 (373)
.....+++.+.+.++ ++..+ ++..++ .+.+ ++ .....+. +. .+++ ....|+|+ ...+|..++
T Consensus 38 ~~~nlLais~~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~-~l~f-d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 38 ASLQNLDISNSKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VI-FVCF-HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp SCCBCEEEETTTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EE-EEEE-ETTEEEEE-ESSEEEEEE
T ss_pred ccccEEEEcCCCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-ee-EEEE-CCCEEEEE-cCCcEEEEE
Confidence 345668898866665 55554 565566 1111 11 1122344 77 8999 33357788 446777787
Q ss_pred -cCC--cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc
Q 017317 144 -EEG--VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA 220 (373)
Q Consensus 144 -~~g--~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ 220 (373)
.+- ....... . . .++++..-+. ++.+.+. +|.|+.+|.++++...+. ...
T Consensus 113 v~sl~~~~~~~~~-~-~---~v~~i~~~~p-~~av~~~------------------dG~L~v~dl~~~~~~~~~---~~V 165 (388)
T 1xip_A 113 LEELSEFRTVTSF-E-K---PVFQLKNVNN-TLVILNS------------------VNDLSALDLRTKSTKQLA---QNV 165 (388)
T ss_dssp SSSTTCEEEEEEC-S-S---CEEEEEECSS-EEEEEET------------------TSEEEEEETTTCCEEEEE---ESE
T ss_pred chhhhccCcccee-e-c---ceeeEEecCC-CEEEEEC------------------CCCEEEEEccCCcccccc---CCc
Confidence 432 1211111 1 1 1234333222 2444332 478888888766655433 345
Q ss_pred ceEEEccCCCEEEEEeCCCCeEEEEEecCC
Q 017317 221 NGVALSKDEDYLVVCETFKFRCLKYWLKGE 250 (373)
Q Consensus 221 ~gi~~~~dg~~l~v~~~~~~~i~~~~~~~~ 250 (373)
..++|+|+| +.++. .++.+..|..++.
T Consensus 166 s~v~WSpkG--~~vg~-~dg~i~~~~~~~~ 192 (388)
T 1xip_A 166 TSFDVTNSQ--LAVLL-KDRSFQSFAWRNG 192 (388)
T ss_dssp EEEEECSSE--EEEEE-TTSCEEEEEEETT
T ss_pred eEEEEcCCc--eEEEE-cCCcEEEEcCCCc
Confidence 689999999 33333 4567888876654
No 343
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=79.07 E-value=30 Score=29.63 Aligned_cols=219 Identities=9% Similarity=-0.005 Sum_probs=105.3
Q ss_pred CeEEEEE-cCCceEEeeeecC-ccccCeEECCCCcEEEEECC------CcEEEEe-cCC-cEEEeeccCCccccccceeE
Q 017317 97 GWIKRLH-KNGTWENWKLIGG-DTLLGITTTQENEILVCDAD------KGLLKVT-EEG-VTVLASHVNGSRINLADDLI 166 (373)
Q Consensus 97 g~I~~~~-~~g~~~~~~~~~~-~p~~gl~~d~~g~L~va~~~------~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~ 166 (373)
..+..++ ..++++.....+. +...+++. -++.||+.... ..+.++| .+. .+.+..... . ..-..++
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~-~--r~~~~~~ 105 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRD-R--RSTLGAA 105 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSS-C--CBSCEEE
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCc-c--ccceEEE
Confidence 3467777 3445554432221 11103333 36788886321 3478888 555 555533111 1 1112222
Q ss_pred EcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc---ceEEEccCCCEEEEEeCC-----
Q 017317 167 AATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVALSKDEDYLVVCETF----- 238 (373)
Q Consensus 167 ~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~---~gi~~~~dg~~l~v~~~~----- 238 (373)
. -++.||+..+... ......+++||+.+++.+.+.. ...+ ...+. -++ .+|+....
T Consensus 106 ~-~~~~iyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 106 V-LNGLLYAVGGFDG------------STGLSSVEAYNIKSNEWFHVAP-MNTRRSSVGVGV-VGG-LLYAVGGYDVASR 169 (302)
T ss_dssp E-ETTEEEEEEEECS------------SCEEEEEEEEETTTTEEEEECC-CSSCCBSCEEEE-ETT-EEEEECCEETTTT
T ss_pred E-ECCEEEEEcCCCC------------CccCceEEEEeCCCCeEeecCC-CCCcccCceEEE-ECC-EEEEEeCCCCCCC
Confidence 2 3688998743210 0112468999999888877532 2222 22222 244 48886421
Q ss_pred --CCeEEEEEecCCCCcceeEEecCCCC-CCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCC
Q 017317 239 --KFRCLKYWLKGESKEQTEIFVENLPG-GPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPL 315 (373)
Q Consensus 239 --~~~i~~~~~~~~~~~~~~~~~~~~~g-~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 315 (373)
.+.+++|+.... +..... ..+. .-..-+.--++.||+...... .
T Consensus 170 ~~~~~~~~yd~~~~---~W~~~~-~~p~~r~~~~~~~~~~~iyv~GG~~~-----------------------------~ 216 (302)
T 2xn4_A 170 QCLSTVECYNATTN---EWTYIA-EMSTRRSGAGVGVLNNLLYAVGGHDG-----------------------------P 216 (302)
T ss_dssp EECCCEEEEETTTT---EEEEEC-CCSSCCBSCEEEEETTEEEEECCBSS-----------------------------S
T ss_pred ccccEEEEEeCCCC---cEEECC-CCccccccccEEEECCEEEEECCCCC-----------------------------C
Confidence 245888886432 222221 2221 111112223677887643211 0
Q ss_pred CccEEEEEECCCCcEEEEEeC-CCCceecceeEEEEeCCEEEEee-CC----CCeEEEeeCC
Q 017317 316 HKKAAVVNVAANGIVIRKFED-PNGKVMSFVTSALEFDDHLYLGS-LN----TNFIGKLPLK 371 (373)
Q Consensus 316 ~~~g~v~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~vgs-~~----~~~i~~~~l~ 371 (373)
.....+..||++......+.. +..+ .-..+...+++||+-+ .. .+.|.+|++.
T Consensus 217 ~~~~~~~~yd~~~~~W~~~~~~~~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 217 LVRKSVEVYDPTTNAWRQVADMNMCR---RNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred cccceEEEEeCCCCCEeeCCCCCCcc---ccCeEEEECCEEEEECCcCCCcccccEEEEcCC
Confidence 011236888887766666543 2221 1223344477777654 22 2347777765
No 344
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=78.12 E-value=56 Score=32.25 Aligned_cols=111 Identities=10% Similarity=0.001 Sum_probs=58.7
Q ss_pred CCCEEE-Eec------CCeEEEEE-cCCceEEeeeec-Ccc-ccCeEECCCCcEEEEECC---CcEEEEe-cCC-cEEEe
Q 017317 87 NGVLYT-ATR------DGWIKRLH-KNGTWENWKLIG-GDT-LLGITTTQENEILVCDAD---KGLLKVT-EEG-VTVLA 151 (373)
Q Consensus 87 ~G~l~v-~~~------~g~I~~~~-~~g~~~~~~~~~-~~p-~~gl~~d~~g~L~va~~~---~gl~~~~-~~g-~~~l~ 151 (373)
+|.||+ |.. -..++++| .+.+++.....+ .+- + +.+.-.+|.|||.... ..+..+| .+. .+.+.
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h-~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRH-SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSC-EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccc-eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEcc
Confidence 788885 431 13578888 344565543222 111 2 3344247899986322 1588888 555 55553
Q ss_pred ec--cCCccccccceeEEcCC-CcEEEEeCCccccccccccccccccCCceEEEEeCCCCe
Q 017317 152 SH--VNGSRINLADDLIAATD-GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNE 209 (373)
Q Consensus 152 ~~--~~~~~~~~~~~l~~~~d-G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 209 (373)
.. .+. +......++++.+ |.||+..+...-+ ......+++||+.+.+
T Consensus 530 ~~g~~p~-~r~~~~a~v~~~~~~~iyv~GG~~~~~----------~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 530 PKDEFFQ-NSLVSAGLEFDPVSKQGIILGGGFMDQ----------TTVSDKAIIFKYDAEN 579 (695)
T ss_dssp CSSGGGG-SCCBSCEEEEETTTTEEEEECCBCTTS----------SCBCCEEEEEEECTTC
T ss_pred CCCCCCC-cccceeEEEEeCCCCEEEEECCcCCCC----------CeeeCcEEEEEccCCc
Confidence 31 111 1112223555655 8899875421000 0123579999998887
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=77.99 E-value=33 Score=29.62 Aligned_cols=111 Identities=13% Similarity=0.126 Sum_probs=58.9
Q ss_pred CCCEEE-EecC-------CeEEEEE-cCCceEEeeeecC-ccccCeEECCCCcEEEEEC-------CCcEEEEe-cCC-c
Q 017317 87 NGVLYT-ATRD-------GWIKRLH-KNGTWENWKLIGG-DTLLGITTTQENEILVCDA-------DKGLLKVT-EEG-V 147 (373)
Q Consensus 87 ~G~l~v-~~~~-------g~I~~~~-~~g~~~~~~~~~~-~p~~gl~~d~~g~L~va~~-------~~gl~~~~-~~g-~ 147 (373)
++.||+ |..+ ..+.++| .+++++.....+. +...+.+. .+++||+... ...+.++| .+. .
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 688984 4321 3467888 3456665543221 11103333 4678998632 13478888 555 5
Q ss_pred EEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee
Q 017317 148 TVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL 214 (373)
Q Consensus 148 ~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 214 (373)
+.+...... ..-..+++ -++.||+..+... ......+++||+++++.+.+.
T Consensus 188 ~~~~~~p~~---r~~~~~~~-~~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 188 KDLAPMKTP---RSMFGVAI-HKGKIVIAGGVTE------------DGLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp EEECCCSSC---CBSCEEEE-ETTEEEEEEEEET------------TEEEEEEEEEETTTCCEEECC
T ss_pred EECCCCCCC---cccceEEE-ECCEEEEEcCcCC------------CCccceEEEEECCCCeEEECC
Confidence 555321111 11112222 3678998753210 011246899999988887763
No 346
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=77.56 E-value=33 Score=29.37 Aligned_cols=147 Identities=13% Similarity=0.096 Sum_probs=75.4
Q ss_pred CCCEEE-Eec----CCeEEEEE-cCCceEEeeeecC-ccccCeEECCCCcEEEEECC-------CcEEEEe-cCC-cEEE
Q 017317 87 NGVLYT-ATR----DGWIKRLH-KNGTWENWKLIGG-DTLLGITTTQENEILVCDAD-------KGLLKVT-EEG-VTVL 150 (373)
Q Consensus 87 ~G~l~v-~~~----~g~I~~~~-~~g~~~~~~~~~~-~p~~gl~~d~~g~L~va~~~-------~gl~~~~-~~g-~~~l 150 (373)
++.||+ |.. ...+.+++ .+++++.....+. +...+.+. -+++|||.... ..+.++| .+. .+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~ 133 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK 133 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence 678884 432 35788888 4456665543221 11102222 36789886321 2478888 555 5554
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc---ceEEEcc
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVALSK 227 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~---~gi~~~~ 227 (373)
...... ..-..+ +.-++.||+..+...... .......+++||+.+++.+.+.. ...+ ..++..
T Consensus 134 ~~~p~~---r~~~~~-~~~~~~iyv~GG~~~~~~--------~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~- 199 (306)
T 3ii7_A 134 PSMLTQ---RCSHGM-VEANGLIYVCGGSLGNNV--------SGRVLNSCEVYDPATETWTELCP-MIEARKNHGLVFV- 199 (306)
T ss_dssp CCCSSC---CBSCEE-EEETTEEEEECCEESCTT--------TCEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-
T ss_pred CCCcCC---cceeEE-EEECCEEEEECCCCCCCC--------cccccceEEEeCCCCCeEEECCC-ccchhhcceEEEE-
Confidence 321111 111122 224789998754210000 00013569999999988877642 2222 223332
Q ss_pred CCCEEEEEeCC-----CCeEEEEEecC
Q 017317 228 DEDYLVVCETF-----KFRCLKYWLKG 249 (373)
Q Consensus 228 dg~~l~v~~~~-----~~~i~~~~~~~ 249 (373)
++ .+|+.... .+.+++|+...
T Consensus 200 ~~-~i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 200 KD-KIFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp TT-EEEEECCEETTEEBCCEEEEETTT
T ss_pred CC-EEEEEeCCCCCCCCceEEEeeCCC
Confidence 44 48877432 24588888654
No 347
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=77.15 E-value=34 Score=29.21 Aligned_cols=220 Identities=11% Similarity=0.054 Sum_probs=105.1
Q ss_pred CeEEEEEc-CCceEEeeeecC-ccccCeEECCCCcEEEEECC------CcEEEEe-cCC----cEEEeeccCCccccccc
Q 017317 97 GWIKRLHK-NGTWENWKLIGG-DTLLGITTTQENEILVCDAD------KGLLKVT-EEG----VTVLASHVNGSRINLAD 163 (373)
Q Consensus 97 g~I~~~~~-~g~~~~~~~~~~-~p~~gl~~d~~g~L~va~~~------~gl~~~~-~~g----~~~l~~~~~~~~~~~~~ 163 (373)
..+++++. +++++.....+. +...+.+. -++.||+.... ..++++| .++ .+.+... +. + ..-.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~-p~-~-r~~~ 106 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS-LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPM-NV-R-RGLA 106 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCC-SS-C-CBSC
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE-ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCC-CC-C-ccce
Confidence 35788883 455555432221 11102333 35788886321 3478888 332 3433221 11 1 1111
Q ss_pred eeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCC--CCcceEEEccCCCEEEEEeCC---
Q 017317 164 DLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSL--FFANGVALSKDEDYLVVCETF--- 238 (373)
Q Consensus 164 ~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~--~~~~gi~~~~dg~~l~v~~~~--- 238 (373)
.++. -++.||+..+.. .......+++||+.+++.+.+..-. ......+. -++ .+|+....
T Consensus 107 ~~~~-~~~~lyv~GG~~------------~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~ 171 (301)
T 2vpj_A 107 GATT-LGDMIYVSGGFD------------GSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASG-VIYCLGGYDGL 171 (301)
T ss_dssp EEEE-ETTEEEEECCBC------------SSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETT-EEEEECCBCSS
T ss_pred eEEE-ECCEEEEEcccC------------CCcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECC-EEEEECCCCCC
Confidence 2222 368899875421 0112357999999988877654311 11122222 244 48887432
Q ss_pred --CCeEEEEEecCCCCcceeEEecCCCC-CCCceeECCCCCEEEEEecCCCchhhhccCChHHHHHHHhcchhhhhccCC
Q 017317 239 --KFRCLKYWLKGESKEQTEIFVENLPG-GPDNIKLAPDGSFWIAILQLSSPGLEFVHTSKATKHLLAAFPKLIKLVAPL 315 (373)
Q Consensus 239 --~~~i~~~~~~~~~~~~~~~~~~~~~g-~p~~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 315 (373)
.+.+++|+.... +..... ..+. .-..-+.--++.||+...... .
T Consensus 172 ~~~~~~~~~d~~~~---~W~~~~-~~p~~r~~~~~~~~~~~i~v~GG~~~-----------------------------~ 218 (301)
T 2vpj_A 172 NILNSVEKYDPHTG---HWTNVT-PMATKRSGAGVALLNDHIYVVGGFDG-----------------------------T 218 (301)
T ss_dssp CBCCCEEEEETTTT---EEEEEC-CCSSCCBSCEEEEETTEEEEECCBCS-----------------------------S
T ss_pred cccceEEEEeCCCC---cEEeCC-CCCcccccceEEEECCEEEEEeCCCC-----------------------------C
Confidence 356888986543 222221 2221 111122223667887643211 0
Q ss_pred CccEEEEEECCCCcEEEEEeC-CCCceecceeEEEEeCCEEEEee-CCC----CeEEEeeCC
Q 017317 316 HKKAAVVNVAANGIVIRKFED-PNGKVMSFVTSALEFDDHLYLGS-LNT----NFIGKLPLK 371 (373)
Q Consensus 316 ~~~g~v~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~vgs-~~~----~~i~~~~l~ 371 (373)
.....+..||++......+.. +..+ ....+...+++||+-+ ..+ +.|.++++.
T Consensus 219 ~~~~~v~~yd~~~~~W~~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 219 AHLSSVEAYNIRTDSWTTVTSMTTPR---CYVGATVLRGRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp SBCCCEEEEETTTTEEEEECCCSSCC---BSCEEEEETTEEEEECCBCSSSBEEEEEEEETT
T ss_pred cccceEEEEeCCCCcEEECCCCCCcc---cceeEEEECCEEEEEcCcCCCcccccEEEEcCC
Confidence 001236788887666665543 2222 1123333477777654 322 456677765
No 348
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=76.21 E-value=38 Score=29.29 Aligned_cols=134 Identities=16% Similarity=0.078 Sum_probs=65.7
Q ss_pred eEEEEEc-CCceEEeeee--cCccccCeEECCCCcEEEEECC-----C-------cEEEEe-cCC-cEEEeeccCCcccc
Q 017317 98 WIKRLHK-NGTWENWKLI--GGDTLLGITTTQENEILVCDAD-----K-------GLLKVT-EEG-VTVLASHVNGSRIN 160 (373)
Q Consensus 98 ~I~~~~~-~g~~~~~~~~--~~~p~~gl~~d~~g~L~va~~~-----~-------gl~~~~-~~g-~~~l~~~~~~~~~~ 160 (373)
.+..+|+ .+++...... ..+...+++ ..++.||+.... . .++++| .++ .+.+... +...
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~-p~~r-- 100 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIV-TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPL-PSAR-- 100 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEE-CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCB-SSCB--
T ss_pred ceEEECCCCCceecccCCccCCccceEEE-EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCC-Cccc--
Confidence 3677773 4455442211 112120333 346788886431 0 166777 455 5544321 1111
Q ss_pred ccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc---ceEEEccCCCEEEEEeC
Q 017317 161 LADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVALSKDEDYLVVCET 237 (373)
Q Consensus 161 ~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~---~gi~~~~dg~~l~v~~~ 237 (373)
.-..++. -++.||+..+... ........+++||+.+.+.+.+.. ...+ ...+. .++ .+|+...
T Consensus 101 ~~~~~~~-~~~~iyv~GG~~~----------~~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~-~iyv~GG 166 (318)
T 2woz_A 101 CLFGLGE-VDDKIYVVAGKDL----------QTEASLDSVLCYDPVAAKWSEVKN-LPIKVYGHNVIS-HNG-MIYCLGG 166 (318)
T ss_dssp CSCEEEE-ETTEEEEEEEEBT----------TTCCEEEEEEEEETTTTEEEEECC-CSSCEESCEEEE-ETT-EEEEECC
T ss_pred cccceEE-ECCEEEEEcCccC----------CCCcccceEEEEeCCCCCEeECCC-CCCcccccEEEE-ECC-EEEEEcC
Confidence 1122222 3688998754210 001123469999999888877542 2222 22333 344 4887643
Q ss_pred C------CCeEEEEEecC
Q 017317 238 F------KFRCLKYWLKG 249 (373)
Q Consensus 238 ~------~~~i~~~~~~~ 249 (373)
. .+.+++|+...
T Consensus 167 ~~~~~~~~~~~~~yd~~~ 184 (318)
T 2woz_A 167 KTDDKKCTNRVFIYNPKK 184 (318)
T ss_dssp EESSSCBCCCEEEEETTT
T ss_pred CCCCCCccceEEEEcCCC
Confidence 2 24588898654
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=75.15 E-value=8.3 Score=34.53 Aligned_cols=52 Identities=8% Similarity=-0.118 Sum_probs=27.8
Q ss_pred CceEEEEeCCCCeEEEeecCC--CCcceEE--EccCCCEEEEEe-CCCCeEEEEEec
Q 017317 197 HGKLLKYDPSLNETSILLDSL--FFANGVA--LSKDEDYLVVCE-TFKFRCLKYWLK 248 (373)
Q Consensus 197 ~g~l~~~d~~~~~~~~~~~~~--~~~~gi~--~~~dg~~l~v~~-~~~~~i~~~~~~ 248 (373)
.|.|+.+|.++|+........ ..+-+.. -.+++..+|+.+ +.+++|+.++..
T Consensus 19 dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~ 75 (339)
T 2be1_A 19 EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAH 75 (339)
T ss_dssp TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETT
T ss_pred CCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECC
Confidence 378888888777765433221 1111000 001233477776 567888888854
No 350
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=74.08 E-value=41 Score=28.70 Aligned_cols=145 Identities=10% Similarity=0.091 Sum_probs=74.1
Q ss_pred CCCEEE-Eec-----CCeEEEEE-cCCceEEeeeecC-ccccCeEECCCCcEEEEECC------CcEEEEe-cCC-cEEE
Q 017317 87 NGVLYT-ATR-----DGWIKRLH-KNGTWENWKLIGG-DTLLGITTTQENEILVCDAD------KGLLKVT-EEG-VTVL 150 (373)
Q Consensus 87 ~G~l~v-~~~-----~g~I~~~~-~~g~~~~~~~~~~-~p~~gl~~d~~g~L~va~~~------~gl~~~~-~~g-~~~l 150 (373)
++.||+ |.. ...+.++| .+++++.....+. +...+++. -++.||+.... ..+.++| .+. .+.+
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 688885 332 24578888 4456665543221 11103333 36788885321 1366777 455 5554
Q ss_pred eeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc---ceEEEcc
Q 017317 151 ASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGVALSK 227 (373)
Q Consensus 151 ~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~---~gi~~~~ 227 (373)
..... + ..-..++. -++.||+..+.... .......+++||+.+++.+.+.. ...+ ...+..
T Consensus 140 ~~~p~--~-r~~~~~~~-~~~~iyv~GG~~~~----------~~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~~- 203 (302)
T 2xn4_A 140 APMNT--R-RSSVGVGV-VGGLLYAVGGYDVA----------SRQCLSTVECYNATTNEWTYIAE-MSTRRSGAGVGVL- 203 (302)
T ss_dssp CCCSS--C-CBSCEEEE-ETTEEEEECCEETT----------TTEECCCEEEEETTTTEEEEECC-CSSCCBSCEEEEE-
T ss_pred CCCCC--c-ccCceEEE-ECCEEEEEeCCCCC----------CCccccEEEEEeCCCCcEEECCC-CccccccccEEEE-
Confidence 32111 1 11112222 37889987532100 00113469999999888877632 2222 222222
Q ss_pred CCCEEEEEeCC-----CCeEEEEEecC
Q 017317 228 DEDYLVVCETF-----KFRCLKYWLKG 249 (373)
Q Consensus 228 dg~~l~v~~~~-----~~~i~~~~~~~ 249 (373)
++ .+|+.... .+.+++|+...
T Consensus 204 ~~-~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 204 NN-LLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp TT-EEEEECCBSSSSBCCCEEEEETTT
T ss_pred CC-EEEEECCCCCCcccceEEEEeCCC
Confidence 33 58887532 24688898654
No 351
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=68.63 E-value=30 Score=34.16 Aligned_cols=104 Identities=11% Similarity=0.144 Sum_probs=47.6
Q ss_pred CcEEEEECCCcEEEEecCC--cEEEeeccCCccccccceeEEcCC--CcEEEEeCCccccccccccccccccCCceEEEE
Q 017317 128 NEILVCDADKGLLKVTEEG--VTVLASHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKY 203 (373)
Q Consensus 128 g~L~va~~~~gl~~~~~~g--~~~l~~~~~~~~~~~~~~l~~~~d--G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~ 203 (373)
..+|++....||++-+..| .+.+..............|+++|. +++|++.... + ....++||+=
T Consensus 56 ~~~~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~~IavdP~dp~~vyvag~~~--~----------~~~~g~v~rS 123 (685)
T 3f6k_A 56 PLVIMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEFGMAIGPENSGKVVLTAEVS--G----------GSRGGRIFRS 123 (685)
T ss_dssp CC-----CEEEEEEESSTTSSCEECGGGGTTCCBCGGGCEEECSTTCCCEEEEECCC--T----------TCSSCEEEEE
T ss_pred CceEEeecCCeEEEEeCCCCCceECcCCCCCCcccceeEEEECCCCCCEEEEEEecc--C----------CCCCceEEEE
Confidence 3444444445677666445 565543322222223467899984 3788875320 0 0124677776
Q ss_pred eCCCCeEEEeecCCCCcceEEEccCC-CEEEEEeCCCCeEEE
Q 017317 204 DPSLNETSILLDSLFFANGVALSKDE-DYLVVCETFKFRCLK 244 (373)
Q Consensus 204 d~~~~~~~~~~~~~~~~~gi~~~~dg-~~l~v~~~~~~~i~~ 244 (373)
+-.+..++.+.........++++|.. +.+|+.. ...++++
T Consensus 124 ~DgG~TW~~~~~p~~~~~~l~~~P~~~~~l~a~~-~~~gly~ 164 (685)
T 3f6k_A 124 SDFAKNFVQTDLPFHPLTQMMYSPQNSDYLLALS-TENGLWV 164 (685)
T ss_dssp SSTTSSCEEEECSSCBSSCCEEETTEEEEEEEEB-TTCCEEE
T ss_pred CCCCceeEeccCCCCCceEEEEecCCCCEEEEEE-CCCCEEE
Confidence 54444455443222111246666643 3344443 2334444
No 352
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=60.97 E-value=1.2e+02 Score=29.23 Aligned_cols=62 Identities=10% Similarity=0.144 Sum_probs=37.0
Q ss_pred eecCccccCeEECCCCcEEEEECC--CcEEEEe-cC------C-c----EEEeeccCCccccccceeEEcCCCcEEEEe
Q 017317 113 LIGGDTLLGITTTQENEILVCDAD--KGLLKVT-EE------G-V----TVLASHVNGSRINLADDLIAATDGSIYFSV 177 (373)
Q Consensus 113 ~~~~~p~~gl~~d~~g~L~va~~~--~gl~~~~-~~------g-~----~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~ 177 (373)
..+..|+ |+-++|||+-.++... ..+..++ .. + + ..+..... ....|...++|++|+.|.+-
T Consensus 320 P~pksPH-Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~GlGPlHt~Fd~~G~aYTtl 395 (638)
T 3sbq_A 320 PVPKNPH-GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LGLGPLHTTFDGRGNAYTTL 395 (638)
T ss_dssp EESSSCC-CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CCSCEEEEEECSSSEEEEEE
T ss_pred eCCCCCc-ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CCCcccEEEECCCCceEeee
Confidence 4457899 9999999986655432 2344444 21 1 1 11111111 12367788999999999874
No 353
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=57.02 E-value=92 Score=26.57 Aligned_cols=143 Identities=12% Similarity=0.203 Sum_probs=74.3
Q ss_pred CCCEEE-Eec---------CCeEEEEEc-CCceEEeeeec-CccccCeEECCCCcEEEEEC------CCcEEEEe-cCC-
Q 017317 87 NGVLYT-ATR---------DGWIKRLHK-NGTWENWKLIG-GDTLLGITTTQENEILVCDA------DKGLLKVT-EEG- 146 (373)
Q Consensus 87 ~G~l~v-~~~---------~g~I~~~~~-~g~~~~~~~~~-~~p~~gl~~d~~g~L~va~~------~~gl~~~~-~~g- 146 (373)
++.||+ |.. ...++++|. +++++.....+ .+...+++. -+++||+... ...+.++| .+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 148 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDE 148 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTE
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCe
Confidence 678884 322 235788883 45555543322 121102333 3678998632 13477888 455
Q ss_pred cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecCCCCc---ceE
Q 017317 147 VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDSLFFA---NGV 223 (373)
Q Consensus 147 ~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~---~gi 223 (373)
.+.+..... . ..-...+. -++.||+..+... ......+++||+.+.+.+.+.. ...+ ...
T Consensus 149 W~~~~~~p~-~--r~~~~~~~-~~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~~-~p~~r~~~~~ 211 (308)
T 1zgk_A 149 WHLVAPMLT-R--RIGVGVAV-LNRLLYAVGGFDG------------TNRLNSAECYYPERNEWRMITA-MNTIRSGAGV 211 (308)
T ss_dssp EEECCCCSS-C--CBSCEEEE-ETTEEEEECCBCS------------SCBCCCEEEEETTTTEEEECCC-CSSCCBSCEE
T ss_pred EeECCCCCc-c--ccceEEEE-ECCEEEEEeCCCC------------CCcCceEEEEeCCCCeEeeCCC-CCCccccceE
Confidence 554432111 1 11112222 2788998753210 0113579999999888876532 2222 223
Q ss_pred EEccCCCEEEEEeCC-----CCeEEEEEecC
Q 017317 224 ALSKDEDYLVVCETF-----KFRCLKYWLKG 249 (373)
Q Consensus 224 ~~~~dg~~l~v~~~~-----~~~i~~~~~~~ 249 (373)
+.. + +.+|+.... .+.+++|+...
T Consensus 212 ~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~ 240 (308)
T 1zgk_A 212 CVL-H-NCIYAAGGYDGQDQLNSVERYDVET 240 (308)
T ss_dssp EEE-T-TEEEEECCBCSSSBCCCEEEEETTT
T ss_pred EEE-C-CEEEEEeCCCCCCccceEEEEeCCC
Confidence 332 3 358887532 25688898654
No 354
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=53.00 E-value=1.8e+02 Score=28.67 Aligned_cols=105 Identities=5% Similarity=0.063 Sum_probs=53.4
Q ss_pred CCEEEEecCCeEEEEEcCC-ceEEeeeecCc-----cccCeEECCC--CcEEEEEC------CCcEEEEecCC--cEEEe
Q 017317 88 GVLYTATRDGWIKRLHKNG-TWENWKLIGGD-----TLLGITTTQE--NEILVCDA------DKGLLKVTEEG--VTVLA 151 (373)
Q Consensus 88 G~l~v~~~~g~I~~~~~~g-~~~~~~~~~~~-----p~~gl~~d~~--g~L~va~~------~~gl~~~~~~g--~~~l~ 151 (373)
..+|+++..++|++-+..| .++.+...... .. +|++++. +++|++.. ..+|++-...| .+.+.
T Consensus 56 ~~~~~~t~~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~-~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~ 134 (685)
T 3f6k_A 56 PLVIMTFGQSKLYRSEDYGKNFKDITDLINNTFIRTEF-GMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTD 134 (685)
T ss_dssp CC-----CEEEEEEESSTTSSCEECGGGGTTCCBCGGG-CEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEE
T ss_pred CceEEeecCCeEEEEeCCCCCceECcCCCCCCccccee-EEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEecc
Confidence 4445555567788776444 45555432221 24 7899874 36888754 34566655445 55443
Q ss_pred eccCCccccccceeEEcCC--CcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEeecC
Q 017317 152 SHVNGSRINLADDLIAATD--GSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILLDS 216 (373)
Q Consensus 152 ~~~~~~~~~~~~~l~~~~d--G~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~ 216 (373)
. + ......|+++|. +.||.... .++||+=.-.+..++.+..+
T Consensus 135 ~--p---~~~~~~l~~~P~~~~~l~a~~~------------------~~gly~S~DgG~TW~~i~~~ 178 (685)
T 3f6k_A 135 L--P---FHPLTQMMYSPQNSDYLLALST------------------ENGLWVSKNFGGKWEEIHKA 178 (685)
T ss_dssp C--S---SCBSSCCEEETTEEEEEEEEBT------------------TCCEEEESSTTSSEEEEESS
T ss_pred C--C---CCCceEEEEecCCCCEEEEEEC------------------CCCEEEEeCCCCCcEEeecC
Confidence 1 1 111126778774 35665532 25677755444456655544
No 355
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=48.79 E-value=1.3e+02 Score=25.72 Aligned_cols=101 Identities=12% Similarity=0.020 Sum_probs=49.2
Q ss_pred CcEEEEe-cCC-cEEEeeccCCccccccceeEEcCCCcEEEEeCCccccccccccccccccCCceEEEEeCCCCeEEEee
Q 017317 137 KGLLKVT-EEG-VTVLASHVNGSRINLADDLIAATDGSIYFSVASTKFGLHNWGLDLLEAKPHGKLLKYDPSLNETSILL 214 (373)
Q Consensus 137 ~gl~~~~-~~g-~~~l~~~~~~~~~~~~~~l~~~~dG~l~v~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 214 (373)
..+..+| .++ .+. .. .+. +......-++..++.||+..+....+ ..........+++||+.+++.+.+.
T Consensus 13 ~~~~~yd~~~~~W~~-~~-~~~-p~~r~~~~~~~~~~~iyv~GG~~~~~------~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 13 EGAVAYDPAANECYC-AS-LSS-QVPKNHVSLVTKENQVFVAGGLFYNE------DNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp TEEEEEETTTTEEEE-EE-CCC-CSCSSEEEEECTTCCEEEEEEEEECS------SCSSSCEEEEEEEEETTTTEEEECC
T ss_pred CceEEECCCCCeEec-CC-CCC-CCCccceEEEEECCEEEEEcCcccCC------CCCccccccceEEecCCCCeEEECC
Confidence 5688888 455 443 21 111 11122222334578898864310000 0000011234899999998887653
Q ss_pred cCCCCc---ceEEEccCCCEEEEEeCC--------CCeEEEEEecC
Q 017317 215 DSLFFA---NGVALSKDEDYLVVCETF--------KFRCLKYWLKG 249 (373)
Q Consensus 215 ~~~~~~---~gi~~~~dg~~l~v~~~~--------~~~i~~~~~~~ 249 (373)
. ...+ .+++.. + +.+|+.... .+.+++|+...
T Consensus 84 ~-~p~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~~~~~d~~~ 126 (315)
T 4asc_A 84 P-LPSPRCLFGLGEA-L-NSIYVVGGREIKDGERCLDSVMCYDRLS 126 (315)
T ss_dssp C-BSSCEESCEEEEE-T-TEEEEECCEESSTTCCBCCCEEEEETTT
T ss_pred C-CCcchhceeEEEE-C-CEEEEEeCCcCCCCCcccceEEEECCCC
Confidence 2 2222 223332 3 458886431 24588888643
No 356
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=40.52 E-value=1.1e+02 Score=27.54 Aligned_cols=75 Identities=12% Similarity=0.160 Sum_probs=47.4
Q ss_pred cCCCEEEEEeCCCC--eEEEEEecCCCCcceeEEecCCC---CCCC-ceeECCCCCEEEEEecCCCchhhhccCChHHHH
Q 017317 227 KDEDYLVVCETFKF--RCLKYWLKGESKEQTEIFVENLP---GGPD-NIKLAPDGSFWIAILQLSSPGLEFVHTSKATKH 300 (373)
Q Consensus 227 ~dg~~l~v~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~---g~p~-~i~~d~dG~lwva~~~~~~~~~~~~~~~p~~~~ 300 (373)
.+.++|+.-+...+ .|..||++..+....-.+....| +.+. ++.+-.+..||+.+...
T Consensus 37 ~~k~yL~~~N~~~~~~~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i~~~DsI~i~~~~~---------------- 100 (369)
T 3s9j_A 37 NGKEYLHFENTQKSLYDIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPSPDSQYILVAQNNI---------------- 100 (369)
T ss_dssp TTEEEEEEEECSTTCCEEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEESSSTTSEEEEEGGG----------------
T ss_pred CCcEEEEEeCCCCCcCcEEEEECCCCceeeeeccccCCCCCcccceeeEEecCCCEEEEEeCCc----------------
Confidence 44457888887777 99999987654332212211111 2232 24455677899988653
Q ss_pred HHHhcchhhhhccCCCccEEEEEECCCCcEEEEEe
Q 017317 301 LLAAFPKLIKLVAPLHKKAAVVNVAANGIVIRKFE 335 (373)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~g~v~~~~~~g~~~~~~~ 335 (373)
..+..+|.+|+++..+.
T Consensus 101 ------------------~~i~l~n~~G~~~~k~~ 117 (369)
T 3s9j_A 101 ------------------SRLSSINSQGEIIRNYN 117 (369)
T ss_dssp ------------------TEEEEECTTCCEEEEEE
T ss_pred ------------------ceEEEECCCceEEEEEe
Confidence 14788999999998874
No 357
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=29.47 E-value=2.7e+02 Score=23.95 Aligned_cols=49 Identities=10% Similarity=0.024 Sum_probs=26.2
Q ss_pred EEEEECCCCcEEEEEeC-CCCceecceeEEEEeCCEEEEee-C-----CCCeEEEeeC
Q 017317 320 AVVNVAANGIVIRKFED-PNGKVMSFVTSALEFDDHLYLGS-L-----NTNFIGKLPL 370 (373)
Q Consensus 320 ~v~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~vgs-~-----~~~~i~~~~l 370 (373)
.+..||++......+.. +... ..-..+...+++||+-+ . ..+.+..+++
T Consensus 169 ~v~~yd~~~~~W~~~~~~p~~~--~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~ 224 (357)
T 2uvk_A 169 FLLSFDPSTQQWSYAGESPWYG--TAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDF 224 (357)
T ss_dssp EEEEEETTTTEEEEEEECSSCC--CBSCEEEEETTEEEEECCEEETTEECCCEEEEEC
T ss_pred cEEEEeCCCCcEEECCCCCCCC--cccccEEEECCEEEEEeeecCCCcccCceEEEEe
Confidence 57889987766555532 2211 11133444577877653 1 2345666665
No 358
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=26.71 E-value=4.3e+02 Score=25.29 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=15.1
Q ss_pred EEEEECCCCcEEEEEeCCCC
Q 017317 320 AVVNVAANGIVIRKFEDPNG 339 (373)
Q Consensus 320 ~v~~~~~~g~~~~~~~~~~g 339 (373)
.|+.++.+|++...+..+.+
T Consensus 377 ~I~~Id~tG~V~W~LGg~~~ 396 (571)
T 3elq_A 377 GVVKIGRDKQVKWILAPSKG 396 (571)
T ss_dssp EEEEEETTSCEEEEESCSTT
T ss_pred EEEEEcCCCcEEEEECCCCC
Confidence 46778888999888876653
Done!