BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 017318
         (373 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|255543801|ref|XP_002512963.1| cysteine protease, putative [Ricinus communis]
 gi|223547974|gb|EEF49466.1| cysteine protease, putative [Ricinus communis]
          Length = 373

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 308/366 (84%), Positives = 335/366 (91%), Gaps = 9/366 (2%)

Query: 8   LFLVSLVVF-SAVSSGTLIDD-VDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
            F++S ++F SAV++ TL  D  D LIRQVTDG DE      S N +LLGAEHHFSLFKK
Sbjct: 9   FFVISSILFVSAVTAETLTTDGEDPLIRQVTDGQDE-----SSANPNLLGAEHHFSLFKK 63

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           KF K YASQEEHD+RF IFK+NLRRA RHQKLDP+ATHG+TQFSDLT +EFRR +LGLRR
Sbjct: 64  KFKKTYASQEEHDYRFKIFKSNLRRAERHQKLDPTATHGVTQFSDLTHSEFRRQFLGLRR 123

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
            LRLPKDA++AP+LPTNDLPADFDWREKGAV  VK+QGSCGSCWSFSTTGALEGAN+LAT
Sbjct: 124 -LRLPKDANEAPMLPTNDLPADFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANYLAT 182

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           GKLVSLSEQQLVDCDHECDP E G+CDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD
Sbjct: 183 GKLVSLSEQQLVDCDHECDPAEEGACDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 242

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
           RG AC+FDK+KIAA VANFSVVSLDEDQIAANLVKNGPLAVAINAV+MQTYIGGVSCPYI
Sbjct: 243 RG-ACQFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYI 301

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
           CS+RLDHGVLLVGYGSAGYAPIR+KEKPYWIIKNSWGE+WGE+GYYKICRGRN+CGVDSM
Sbjct: 302 CSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGENWGESGYYKICRGRNICGVDSM 361

Query: 366 VSTVAA 371
           VSTVAA
Sbjct: 362 VSTVAA 367


>gi|118481169|gb|ABK92536.1| unknown [Populus trichocarpa]
          Length = 368

 Score =  624 bits (1608), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 297/354 (83%), Positives = 324/354 (91%), Gaps = 9/354 (2%)

Query: 18  AVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEH 77
           A+S+ T   D D LIRQV +G DE      S++N L   +HHFSLFK+KF K+Y SQEEH
Sbjct: 18  AISAETFNGD-DSLIRQVVEGQDE------SSSNLLTAEQHHFSLFKRKFKKSYLSQEEH 70

Query: 78  DHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP 137
           D+RF++FK+NLRRAARHQKLDP+A+HG+TQFSDLT AEFR+  LGLR KLRLPKDA+ AP
Sbjct: 71  DYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAEFRKQVLGLR-KLRLPKDANTAP 129

Query: 138 ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLV 197
           ILPTNDLP DFDWREKGAVGPVK+QGSCGSCWSFSTTGALEGA+FLATG+LVSLSEQQLV
Sbjct: 130 ILPTNDLPEDFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLV 189

Query: 198 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI 257
           DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG DRG ACKFDK+K+
Sbjct: 190 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGMDRG-ACKFDKNKV 248

Query: 258 AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLV 317
           AA VANFSVVSLDEDQIAANLVKNGPLAVAINAV+MQTYIGGVSCPYICSRRLDHGVLLV
Sbjct: 249 AAGVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLLV 308

Query: 318 GYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           GYGSA YAP+R+KEKPYWIIKNSWGESWGENG+YKICRGRN+CGVDSMVSTVAA
Sbjct: 309 GYGSAAYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSMVSTVAA 362


>gi|224105327|ref|XP_002313770.1| predicted protein [Populus trichocarpa]
 gi|222850178|gb|EEE87725.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 296/354 (83%), Positives = 323/354 (91%), Gaps = 9/354 (2%)

Query: 18  AVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEH 77
           A+S+ T   D D LIRQV +G DE      S++N L   +HHFSLFK+KF K+Y SQEEH
Sbjct: 18  AISAETFNGD-DSLIRQVVEGQDE------SSSNLLTAEQHHFSLFKRKFKKSYLSQEEH 70

Query: 78  DHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP 137
           D+RF++FK+NLRRAARHQKLDP+A+HG+TQFSDLT AEFR+  LGLR KLRLPKDA+ AP
Sbjct: 71  DYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAEFRKQVLGLR-KLRLPKDANTAP 129

Query: 138 ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLV 197
           ILPTNDLP DFDWREKGAVGPVK+QGSCGSCWSFSTTGALEGA+FLATG+LVSLSEQQLV
Sbjct: 130 ILPTNDLPEDFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLV 189

Query: 198 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI 257
           DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG DRG ACKFDK+K+
Sbjct: 190 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGMDRG-ACKFDKNKV 248

Query: 258 AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLV 317
           AA VANFS VSLDEDQIAANLVKNGPLAVAINAV+MQTYIGGVSCPYICSRRLDHGVLLV
Sbjct: 249 AAGVANFSAVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLLV 308

Query: 318 GYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           GYGSA YAP+R+KEKPYWIIKNSWGESWGENG+YKICRGRN+CGVDSMVSTVAA
Sbjct: 309 GYGSAAYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSMVSTVAA 362


>gi|60396844|gb|AAX19661.1| cysteine proteinase [Populus tomentosa]
          Length = 374

 Score =  620 bits (1599), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 296/354 (83%), Positives = 322/354 (90%), Gaps = 9/354 (2%)

Query: 18  AVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEH 77
           A+S+ T   D D LIRQV +G DE      S+ N L   +HH SLFK+KF K+Y SQEEH
Sbjct: 24  AISAETFNGD-DSLIRQVVEGQDE------SSPNLLTAEQHHLSLFKRKFKKSYLSQEEH 76

Query: 78  DHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP 137
           D+RF++FK+NLRRAARHQKLDP+A+HG+TQFSDLT AEFR+  LGLR KLRLPKDA++AP
Sbjct: 77  DYRFSVFKSNLRRAARHQKLDPTASHGVTQFSDLTSAEFRKQVLGLR-KLRLPKDANKAP 135

Query: 138 ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLV 197
           ILPTNDLP DFDWREKGAVGPVK+QGSCGSCWSFSTTGALEGA+FLATG+LVSLSEQQLV
Sbjct: 136 ILPTNDLPEDFDWREKGAVGPVKNQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLV 195

Query: 198 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI 257
           DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG DRG ACKFDK K+
Sbjct: 196 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGMDRG-ACKFDKDKV 254

Query: 258 AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLV 317
           AA VANFSVVSLDEDQIAANLVKNGPLAVA NAV+MQTYIGGVSCPYICSRRLDHGVLLV
Sbjct: 255 AAGVANFSVVSLDEDQIAANLVKNGPLAVATNAVFMQTYIGGVSCPYICSRRLDHGVLLV 314

Query: 318 GYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           GYGSAGYAP+R+KEKPYWIIKNSWGESWGENG+YKICRGRN+CGVDSMVSTVAA
Sbjct: 315 GYGSAGYAPVRMKEKPYWIIKNSWGESWGENGFYKICRGRNICGVDSMVSTVAA 368


>gi|224077886|ref|XP_002305451.1| predicted protein [Populus trichocarpa]
 gi|222848415|gb|EEE85962.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  616 bits (1588), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 294/356 (82%), Positives = 324/356 (91%), Gaps = 9/356 (2%)

Query: 16  FSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQE 75
            SAV + TL  D D LIR+V DG D       S++N L   +HHFSLFK KF K+Y SQE
Sbjct: 16  ISAVHAETLNGD-DPLIREVVDGQD------ASSSNLLSAEQHHFSLFKSKFKKSYGSQE 68

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQ 135
           EHD+RF++FKANLRRAARHQ+LDP+A+HG+TQFSDLTPAEFR+  LGLRR LRLPKDA++
Sbjct: 69  EHDYRFSVFKANLRRAARHQELDPTASHGVTQFSDLTPAEFRKQVLGLRR-LRLPKDANE 127

Query: 136 APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQ 195
           APILPT+DLP DFDWR+KGAVGP+K+QGSCGSCWSFS TGALEGA+FLATG+LVSLSEQQ
Sbjct: 128 APILPTSDLPEDFDWRDKGAVGPIKNQGSCGSCWSFSATGALEGAHFLATGELVSLSEQQ 187

Query: 196 LVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKS 255
           LVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR  ACKFDK+
Sbjct: 188 LVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR-DACKFDKN 246

Query: 256 KIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 315
           K+AA VANFSVVSLDEDQIAANLVKNGPLAVAINAV+MQTYIGGVSCPYICSRRLDHGVL
Sbjct: 247 KVAARVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVL 306

Query: 316 LVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           LVGYGSAGY+P+R+KEKP+WIIKNSWGE WGENG+YKICRGRNVCGVDSMVSTVAA
Sbjct: 307 LVGYGSAGYSPVRMKEKPFWIIKNSWGEKWGENGFYKICRGRNVCGVDSMVSTVAA 362


>gi|57282617|emb|CAE54306.1| putative papain-like cysteine proteinase [Gossypium hirsutum]
          Length = 373

 Score =  614 bits (1583), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 292/364 (80%), Positives = 320/364 (87%), Gaps = 11/364 (3%)

Query: 8   LFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKF 67
            F+V ++     S+     +VD LI QVTDG       HE     LL AEHH+SLFKK+F
Sbjct: 15  FFIVGVICTETFSAEGF--EVDPLIEQVTDG-------HEGAEPQLLTAEHHYSLFKKRF 65

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
            K+Y SQ+EHD+RF IF+ NLRRAARHQ LDPSATHG+TQFSDLTP EFR+ YLGLRR L
Sbjct: 66  KKSYGSQKEHDYRFKIFQVNLRRAARHQNLDPSATHGVTQFSDLTPGEFRKAYLGLRR-L 124

Query: 128 RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
           RLPKDA +APILPT++LP DFDWREKGAV PVK+QGSCGSCWSFSTTGALEGANFLATGK
Sbjct: 125 RLPKDATEAPILPTDNLPQDFDWREKGAVTPVKNQGSCGSCWSFSTTGALEGANFLATGK 184

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           LVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG
Sbjct: 185 LVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 244

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICS 307
             CKFD +K+AA VANFSVVSLDEDQIAANL KNGPLAVAINAV+MQTYIGGVSCPYICS
Sbjct: 245 -TCKFDNTKVAAKVANFSVVSLDEDQIAANLFKNGPLAVAINAVFMQTYIGGVSCPYICS 303

Query: 308 RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
           +RLDHGVLLVGYGSAGYAP+R+K+KPYWIIKNSWGE+WGENG+Y+ICRGRN+CGVDSMVS
Sbjct: 304 KRLDHGVLLVGYGSAGYAPVRMKDKPYWIIKNSWGENWGENGFYRICRGRNICGVDSMVS 363

Query: 368 TVAA 371
           TVAA
Sbjct: 364 TVAA 367


>gi|7381219|gb|AAF61440.1|AF138264_1 papain-like cysteine proteinase isoform I [Ipomoea batatas]
          Length = 368

 Score =  604 bits (1557), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 287/372 (77%), Positives = 320/372 (86%), Gaps = 12/372 (3%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQ-LIRQVTDGGDEILSHHESTNNDLLGAEHH 59
           M  +  +LFL +L+  +++      DD D  LIRQV   GD           DLL A+HH
Sbjct: 1   MAFRFSLLFLCTLLATTSLVFAAEDDDGDDVLIRQVVGDGD----------GDLLNADHH 50

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F++FK++F KAYAS EEHD+R ++FKAN+RRA RHQ+LDP+A HG+TQFSDLTP EFRR 
Sbjct: 51  FTVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDLTPTEFRRK 110

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           +LGL R+L+ P DA  APILPT++LP+DFDWR+ GAV PVK+QG+CGSCWSFSTTGALEG
Sbjct: 111 FLGLNRRLKFPADAKTAPILPTDELPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEG 170

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
           ANFLATGKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLKAGGLMREEDY
Sbjct: 171 ANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 230

Query: 240 PYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGG 299
           PYTG D    C+FDK+KIAA VANFSVVSLDEDQIAANLVKNGPLAVAINAV+MQTYIGG
Sbjct: 231 PYTGNDL-QVCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG 289

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV 359
           VSCPYICS+RLDHGVLLVGYGSAGYAPIR+KEKPYWIIKNSWGESWGENGYYKICRGRNV
Sbjct: 290 VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNV 349

Query: 360 CGVDSMVSTVAA 371
           CGVDSMVSTVAA
Sbjct: 350 CGVDSMVSTVAA 361


>gi|7211741|gb|AAF40414.1|AF216783_1 papain-like cysteine proteinase isoform I [Ipomoea batatas]
          Length = 368

 Score =  603 bits (1556), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 287/372 (77%), Positives = 320/372 (86%), Gaps = 12/372 (3%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQ-LIRQVTDGGDEILSHHESTNNDLLGAEHH 59
           M  +  +LFL +L+  +++      DD D  LIRQV   GD           DLL A+HH
Sbjct: 1   MAFRFSLLFLCTLLATTSLVFAAEDDDGDDILIRQVVGDGD----------GDLLNADHH 50

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F++FK++F KAYAS EEHD+R ++FKAN+RRA RHQ+LDP+A HG+TQFSDLTP EFRR 
Sbjct: 51  FTVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDLTPTEFRRK 110

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           +LGL R+L+ P DA  APILPT++LP+DFDWR+ GAV PVK+QG+CGSCWSFSTTGALEG
Sbjct: 111 FLGLNRRLKFPADAKTAPILPTDELPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEG 170

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
           ANFLATGKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLKAGGLMREEDY
Sbjct: 171 ANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 230

Query: 240 PYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGG 299
           PYTG D    C+FDK+KIAA VANFSVVSLDEDQIAANLVKNGPLAVAINAV+MQTYIGG
Sbjct: 231 PYTGNDL-QVCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG 289

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV 359
           VSCPYICS+RLDHGVLLVGYGSAGYAPIR+KEKPYWIIKNSWGESWGENGYYKICRGRNV
Sbjct: 290 VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNV 349

Query: 360 CGVDSMVSTVAA 371
           CGVDSMVSTVAA
Sbjct: 350 CGVDSMVSTVAA 361


>gi|449464688|ref|XP_004150061.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
 gi|449519862|ref|XP_004166953.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 377

 Score =  602 bits (1552), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 291/370 (78%), Positives = 327/370 (88%), Gaps = 10/370 (2%)

Query: 7   VLFLVSLVVFSAVSSGTLI--DDVDQLIRQVTDGGDEILSHHESTNND--LLGAEHHFSL 62
           ++ ++SL+  SA+ S  +    D D +IRQV D G      +E +N D  LLGA+HHFS+
Sbjct: 7   LIVVLSLLAASAIGSEVISGESDGDFIIRQVVDDG----GVNEGSNGDDLLLGADHHFSV 62

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLG 122
           FK+KF K+YAS+EEHDHRF +FKANL+RA RHQ LDPSATHG+TQFSDLTP+EFRR++LG
Sbjct: 63  FKQKFGKSYASKEEHDHRFRVFKANLKRAQRHQALDPSATHGVTQFSDLTPSEFRRSFLG 122

Query: 123 LR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
           LR R+L LP DA++APILPT+ LP DFDWR+KGAV  VK+QGSCGSCWSFS TGALEGAN
Sbjct: 123 LRSRRLGLPADANKAPILPTDGLPTDFDWRDKGAVSEVKNQGSCGSCWSFSATGALEGAN 182

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
           FLATGKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLK+GGLM+E+DYPY
Sbjct: 183 FLATGKLVSLSEQQLVDCDHECDPEEKGSCDSGCNGGLMNSAFEYTLKSGGLMKEQDYPY 242

Query: 242 TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVS 301
           TGTDRG  CKFDKSKIAASVANFSVVSLDE+QIAANLVKNGPLAVAINAV+MQTYI GVS
Sbjct: 243 TGTDRG-TCKFDKSKIAASVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYIKGVS 301

Query: 302 CPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 361
           CPYICS+ LDHGVLLVGYGS GYAPIRLK+KPYWIIKNSWG +WGENGYYKICRGRN+CG
Sbjct: 302 CPYICSKHLDHGVLLVGYGSDGYAPIRLKDKPYWIIKNSWGANWGENGYYKICRGRNICG 361

Query: 362 VDSMVSTVAA 371
           VDSMVSTVAA
Sbjct: 362 VDSMVSTVAA 371


>gi|7211745|gb|AAF40416.1|AF216785_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
 gi|7381223|gb|AAF61442.1|AF138266_1 papain-like cysteine proteinase isoform III [Ipomoea batatas]
          Length = 366

 Score =  599 bits (1545), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 281/346 (81%), Positives = 308/346 (89%), Gaps = 11/346 (3%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D  D LIRQV   GD           DLL A+HHF++FK++F KAYAS EEHD+R ++FK
Sbjct: 25  DGDDILIRQVVGDGD----------GDLLNADHHFAVFKRRFGKAYASDEEHDYRLSVFK 74

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           AN+RRA RHQ+LDP+A HG+TQFSDLTP EFRR +LGL R+L+ P DA  APILPT++LP
Sbjct: 75  ANMRRAKRHQQLDPAAVHGVTQFSDLTPTEFRRKFLGLNRRLKFPADAKTAPILPTDELP 134

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
           +DFDWR++GAV PVK+QG+CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP
Sbjct: 135 SDFDWRDRGAVTPVKNQGTCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 194

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
           EE GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG D    C+FDK+KIAA VANFS
Sbjct: 195 EEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGNDL-QVCRFDKTKIAAKVANFS 253

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           VVSLDEDQIAANLVKNGPLAVAINAV+MQTYIGGVSCPYICS+RLDHGVLLVGYGSAGYA
Sbjct: 254 VVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGGVSCPYICSKRLDHGVLLVGYGSAGYA 313

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           PIR+KEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA
Sbjct: 314 PIRMKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 359


>gi|7211743|gb|AAF40415.1|AF216784_1 papain-like cysteine proteinase isoform II [Ipomoea batatas]
          Length = 368

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 284/372 (76%), Positives = 318/372 (85%), Gaps = 12/372 (3%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQ-LIRQVTDGGDEILSHHESTNNDLLGAEHH 59
           M  +  +LFL +L+  +++      DD D  LIRQV   GD           DLL A+HH
Sbjct: 1   MAFRFSLLFLCTLLATTSLVFAAEDDDGDDILIRQVVGDGD----------GDLLNADHH 50

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F++FK++F KAYAS EEHD+R ++FKAN+RRA RHQ+LDP+A HG+TQFSD TP EFRR 
Sbjct: 51  FTVFKRRFGKAYASDEEHDYRLSVFKANMRRAKRHQELDPAAVHGVTQFSDSTPTEFRRK 110

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           +LGL R+L+ P DA  APILPT++LP+DFDWR++GAV PVK+QG+CG CWSFSTTGALEG
Sbjct: 111 FLGLNRRLKFPADAKTAPILPTDELPSDFDWRDRGAVTPVKNQGTCGLCWSFSTTGALEG 170

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
           ANFLATGKLVSLSEQQLVDCDHECDPEE GSCD GCNGGLMNSAFEYTLKAGGLMREEDY
Sbjct: 171 ANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDFGCNGGLMNSAFEYTLKAGGLMREEDY 230

Query: 240 PYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGG 299
           PYTG D    C+FDK+KIAA VANFSVVSLDEDQIAANLVKNGPLAVAINAV+MQTYIGG
Sbjct: 231 PYTGNDL-QVCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG 289

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV 359
           VSCPYICS+RLDHGVLLVGYGSAGYAPIR+KEKPYWIIKNSWGESWGENGYYKICRGRNV
Sbjct: 290 VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNV 349

Query: 360 CGVDSMVSTVAA 371
           CGVDSMVSTVAA
Sbjct: 350 CGVDSMVSTVAA 361


>gi|7381221|gb|AAF61441.1|AF138265_1 papain-like cysteine proteinase isoform II [Ipomoea batatas]
          Length = 366

 Score =  597 bits (1538), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 284/372 (76%), Positives = 318/372 (85%), Gaps = 14/372 (3%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVT-DGGDEILSHHESTNNDLLGAEHH 59
           M  +  +LFL +L+  + +      D  D LIRQV  DGGD            LL A+HH
Sbjct: 1   MAFRFSLLFLCTLLATTYLVFAAEDDGDDILIRQVVGDGGD------------LLNADHH 48

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F++FK++F K YAS EEHD+R ++FKAN+RRA +HQ+LDP+A HG+TQFSDLTP EFRR 
Sbjct: 49  FTVFKRRFGKVYASDEEHDYRLSVFKANMRRAKQHQELDPAAVHGVTQFSDLTPTEFRRK 108

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           +LGL R+L+ P DA  APILPT++LP+DFDWR+ GAV PVK+QG+CGSCWSFSTTGALEG
Sbjct: 109 FLGLNRRLKFPADAKTAPILPTDELPSDFDWRDHGAVTPVKNQGTCGSCWSFSTTGALEG 168

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
           ANFLATGKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLKAGGLMREEDY
Sbjct: 169 ANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 228

Query: 240 PYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGG 299
           PYTG D    C+FDK+KIAA VANFSVVSLDEDQIAANLVKNGPLAVAINAV++QTYIGG
Sbjct: 229 PYTGNDL-QVCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFVQTYIGG 287

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV 359
           VSCPYICS+RLDHGVLLVGYGSAGYAPIR+KEKPYWIIKNSWGESWGENGYYKICRGRNV
Sbjct: 288 VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNV 347

Query: 360 CGVDSMVSTVAA 371
           CGVDSMVSTVAA
Sbjct: 348 CGVDSMVSTVAA 359


>gi|146215998|gb|ABQ10201.1| cysteine protease Cp3 [Actinidia deliciosa]
          Length = 365

 Score =  596 bits (1537), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 282/354 (79%), Positives = 314/354 (88%), Gaps = 14/354 (3%)

Query: 18  AVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEH 77
           A +SG   D  D +I+Q+ DG            +  L A+HHF LFK++F K+YA+QE+H
Sbjct: 20  AAASGKSSDGEDLVIQQIVDG------------DHPLSADHHFRLFKRRFGKSYATQEDH 67

Query: 78  DHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP 137
           D+RF++FK NLRRA  HQ+LDPSA HG+TQFSDLTPAEFRR +LGL+R LR P DA++AP
Sbjct: 68  DYRFSVFKTNLRRARHHQRLDPSAVHGVTQFSDLTPAEFRRNHLGLKR-LRFPADANKAP 126

Query: 138 ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLV 197
           ILPT DLPADFDWR+ GAV  VK+QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLV
Sbjct: 127 ILPTEDLPADFDWRDHGAVASVKNQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLV 186

Query: 198 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI 257
           DCDHECDPEEPGSCDSGCNGGLMNSA EYTLKAGGLMREEDYPY+GTDRG  CKFD++KI
Sbjct: 187 DCDHECDPEEPGSCDSGCNGGLMNSALEYTLKAGGLMREEDYPYSGTDRG-TCKFDETKI 245

Query: 258 AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLV 317
           AASVANFSVVSLDE+QIAANLVKNGPLAVAINAV+MQTY+GGVSCPYICS+RLDHGVLLV
Sbjct: 246 AASVANFSVVSLDENQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICSKRLDHGVLLV 305

Query: 318 GYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           GYGSAGYAPIR+KEKPYWIIKNSWGESWGENG+YKIC+GRNVCGVDSMVSTVAA
Sbjct: 306 GYGSAGYAPIRMKEKPYWIIKNSWGESWGENGFYKICQGRNVCGVDSMVSTVAA 359


>gi|225427714|ref|XP_002264345.1| PREDICTED: cysteine proteinase RD19a [Vitis vinifera]
          Length = 377

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 285/355 (80%), Positives = 316/355 (89%), Gaps = 6/355 (1%)

Query: 17  SAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEE 76
           S + SG   DD+  +IRQV     ++    E   N L    HHFS+FK++F K+YASQEE
Sbjct: 23  SELHSGGSDDDI--IIRQVVPELGDVEGSEEE--NLLTADHHHFSIFKRRFGKSYASQEE 78

Query: 77  HDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQA 136
           HD+RF +FKANLRRA RHQ+LDPSATHG+TQFSDLTPAEFR TYLGLR  L+LP DA +A
Sbjct: 79  HDYRFKVFKANLRRARRHQQLDPSATHGVTQFSDLTPAEFRGTYLGLR-PLKLPHDAQKA 137

Query: 137 PILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQL 196
           PILPTNDLP DFDWR+ GAV  VK+QGSCGSCWSFSTTGALEGANFLATG LVSLSEQQL
Sbjct: 138 PILPTNDLPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVSLSEQQL 197

Query: 197 VDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSK 256
           V+CDHECDPEE GSCDSGCNGGLMN+AFEYTLKAGGLM+EEDYPYTGTDRG +CKFDK+K
Sbjct: 198 VECDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYTGTDRG-SCKFDKTK 256

Query: 257 IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLL 316
           IAASV+NFSV+SLDEDQIAANLVKNGPLAVAINAV+MQTY+GGVSCPYICS+RLDHGVLL
Sbjct: 257 IAASVSNFSVISLDEDQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICSKRLDHGVLL 316

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           VGYGSAGYAPIR+K+KPYWIIKNSWGE+WGENG+YKICRGRNVCGVDSMVSTVAA
Sbjct: 317 VGYGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSMVSTVAA 371


>gi|161778780|gb|ABX79341.1| cysteine protease [Vitis vinifera]
          Length = 377

 Score =  591 bits (1524), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 286/361 (79%), Positives = 317/361 (87%), Gaps = 18/361 (4%)

Query: 17  SAVSSGTLIDDVDQLIRQVT------DGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKA 70
           S + SG   DD+  +IRQV       +GG+E         N L    HHFS+FK++F K+
Sbjct: 23  SELHSGGSDDDI--IIRQVVPELGDVEGGEE--------ENLLTADHHHFSIFKRRFGKS 72

Query: 71  YASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLP 130
           YASQEEHD+RF +FKANLRRA RHQ+LDPSATHG+TQFSDLTPAEFR TYLGLR  L+LP
Sbjct: 73  YASQEEHDYRFKVFKANLRRARRHQQLDPSATHGVTQFSDLTPAEFRGTYLGLR-PLKLP 131

Query: 131 KDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVS 190
            DA +APILPTNDLP DFDWR+ GAV  VK+QGSCGSCWSFSTTGALEGANFLATG LVS
Sbjct: 132 HDAQKAPILPTNDLPEDFDWRDHGAVTAVKNQGSCGSCWSFSTTGALEGANFLATGNLVS 191

Query: 191 LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHAC 250
           LSEQQLV+CDHECDPEE GSCDSGCNGGLMN+AFEYTLKAGGLM+EEDYPYTGTDRG +C
Sbjct: 192 LSEQQLVECDHECDPEEMGSCDSGCNGGLMNTAFEYTLKAGGLMKEEDYPYTGTDRG-SC 250

Query: 251 KFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRL 310
           KFDK+KIAASV+NFSV+SLDEDQIAANLVK GPLAVAINAV+MQTY+GGVSCPYICS+RL
Sbjct: 251 KFDKTKIAASVSNFSVISLDEDQIAANLVKIGPLAVAINAVFMQTYVGGVSCPYICSKRL 310

Query: 311 DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVA 370
           DHGVLLVGYGSAGYAPIR+K+KPYWIIKNSWGE+WGENG+YKICRGRNVCGVDSMVSTVA
Sbjct: 311 DHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGENWGENGFYKICRGRNVCGVDSMVSTVA 370

Query: 371 A 371
           A
Sbjct: 371 A 371


>gi|13491752|gb|AAK27969.1|AF242373_1 cysteine protease [Ipomoea batatas]
          Length = 366

 Score =  589 bits (1519), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 283/372 (76%), Positives = 316/372 (84%), Gaps = 14/372 (3%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVT-DGGDEILSHHESTNNDLLGAEHH 59
           M  +  +LFL +L+  + +      D  D LIRQV  DGGD            LL A+HH
Sbjct: 1   MAFRFSLLFLCTLLATTYLVFAAEDDGDDILIRQVVGDGGD------------LLNADHH 48

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F++FK++F K YAS EEHD+R + FKAN+RRA +HQ+LDP+A HG+TQFSDLTP EFRR 
Sbjct: 49  FTVFKRRFGKVYASDEEHDYRLSEFKANMRRAKQHQELDPAAVHGVTQFSDLTPTEFRRK 108

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           +LGL R+L+ P DA  APILPT++LP+DFDWR+ GAV PVK+QG+CGSC SFSTTGALEG
Sbjct: 109 FLGLNRRLKFPADAKTAPILPTDELPSDFDWRDHGAVTPVKNQGTCGSCCSFSTTGALEG 168

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
           ANFLATGKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLKAGGLMREED+
Sbjct: 169 ANFLATGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKAGGLMREEDH 228

Query: 240 PYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGG 299
           PYTG D    C+FDK+KIAA VANFSVVSLDEDQIAANLVKNGPLAVAINAV+MQTYIGG
Sbjct: 229 PYTGNDL-QVCRFDKTKIAAKVANFSVVSLDEDQIAANLVKNGPLAVAINAVFMQTYIGG 287

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV 359
           VSCPYICS+RLDHGVLLVGYGSAGYAPIR+KEKPYWIIKNSWGESWGENGYYKICRGRNV
Sbjct: 288 VSCPYICSKRLDHGVLLVGYGSAGYAPIRMKEKPYWIIKNSWGESWGENGYYKICRGRNV 347

Query: 360 CGVDSMVSTVAA 371
           CGVDSMVSTVAA
Sbjct: 348 CGVDSMVSTVAA 359


>gi|312281839|dbj|BAJ33785.1| unnamed protein product [Thellungiella halophila]
          Length = 373

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 279/369 (75%), Positives = 313/369 (84%), Gaps = 16/369 (4%)

Query: 10  LVSLVVFSAVSSGTLI-----DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFK 64
            V L++F +VSSG +      D  D +IRQV DG +            +L +E HFSLFK
Sbjct: 11  FVLLILFVSVSSGIVAETSSSDGDDLVIRQVVDGAEP----------KVLSSEDHFSLFK 60

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
           +KF K YAS EEHD+R ++FKANLRRA RHQKLDPSA HG+TQFSDLT +EFR+ +LG+R
Sbjct: 61  RKFGKVYASSEEHDYRLSVFKANLRRARRHQKLDPSARHGVTQFSDLTRSEFRKKHLGVR 120

Query: 125 RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
              +LPKDA++APILPT +LP DFDWR++GAV PVK+QGSCGSCWSFS TGALEGANFLA
Sbjct: 121 GGFKLPKDANKAPILPTENLPEDFDWRDRGAVTPVKNQGSCGSCWSFSATGALEGANFLA 180

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TGKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLK GGLMREEDYPYTG 
Sbjct: 181 TGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGK 240

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY 304
           D G  CK DKSKI ASV+NFSV+S+DEDQIAANLVKNGPLAVAINA YMQTYIGGVSCPY
Sbjct: 241 D-GPTCKLDKSKIVASVSNFSVISIDEDQIAANLVKNGPLAVAINAAYMQTYIGGVSCPY 299

Query: 305 ICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDS 364
           IC+RRL+HGVLLVGYGSAGYAP R KEKPYWIIKNSWGESWGENG+YKIC+GRN+CGVDS
Sbjct: 300 ICARRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDS 359

Query: 365 MVSTVAAAV 373
           +VSTV+A V
Sbjct: 360 LVSTVSATV 368


>gi|18141287|gb|AAL60581.1|AF454959_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 368

 Score =  586 bits (1510), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 278/369 (75%), Positives = 316/369 (85%), Gaps = 12/369 (3%)

Query: 5   TVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFK 64
           ++ +F +  +V SA S G   DD+  +I+QV DGG E          ++L +E HFSLFK
Sbjct: 7   SLSVFALLFIVVSASSDGNEGDDL--VIKQVVDGGAE---------PNVLSSEDHFSLFK 55

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
           KKF K YAS+EEHD+RF++FK+NLRRA RHQKLDPSA HG+TQFSDLT +EF+R +LG++
Sbjct: 56  KKFGKVYASREEHDYRFSVFKSNLRRARRHQKLDPSARHGVTQFSDLTRSEFKRKHLGVK 115

Query: 125 RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
              +LPKDA++APILPT +LP +FDWRE+GAV PVK+QGSCGSCWSFS TGALEGANFLA
Sbjct: 116 GGFKLPKDANKAPILPTENLPEEFDWRERGAVTPVKNQGSCGSCWSFSATGALEGANFLA 175

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TGKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLK GGLMREEDYPYTG 
Sbjct: 176 TGKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGK 235

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY 304
           D G  CK DKSKI ASV+NFSV+S+DE+QIAANLVKNGPLAVAINA YMQTYIGGVSCPY
Sbjct: 236 D-GATCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAAYMQTYIGGVSCPY 294

Query: 305 ICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDS 364
           IC RRL+HGVLLVGYGSAGYAP R KEKPYWIIKNSWGE+WGE+G+YKICRGRNVCGVDS
Sbjct: 295 ICMRRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGEDGFYKICRGRNVCGVDS 354

Query: 365 MVSTVAAAV 373
           +VSTV A V
Sbjct: 355 LVSTVTATV 363


>gi|357473427|ref|XP_003606998.1| Cysteine proteinase [Medicago truncatula]
 gi|355508053|gb|AES89195.1| Cysteine proteinase [Medicago truncatula]
          Length = 362

 Score =  585 bits (1508), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 280/372 (75%), Positives = 319/372 (85%), Gaps = 14/372 (3%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M  +T++LF+V L +FS  +  T  +  D +IRQV D                LGAEHHF
Sbjct: 1   MDHRTLLLFVV-LFIFSVSAFSTPDEGEDPIIRQVVD-----------EEGVRLGAEHHF 48

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTY 120
           +LFK KF K Y+S++EHD+RF IFK+NL RA RHQ +DPSA HG+T+FSDLTP EFR++ 
Sbjct: 49  NLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDPSAVHGVTRFSDLTPREFRKSV 108

Query: 121 LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
           LGLR  + LPKDA+ APILPT++LP DFDWREKGAV  VK+QGSCGSCWSFSTTGALEGA
Sbjct: 109 LGLR-GVGLPKDANAAPILPTDNLPKDFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGA 167

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           +FL+TGKLVSLSEQQLVDCDHECDPE+PGSCD+GCNGGLMNSAFEY LK+GG+MREEDYP
Sbjct: 168 HFLSTGKLVSLSEQQLVDCDHECDPEQPGSCDAGCNGGLMNSAFEYILKSGGVMREEDYP 227

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV 300
           Y+GTDRG +CKFDK KIAASVANFSVVSLDEDQIAANLVKNGPLA+A+NAVYMQTY+GGV
Sbjct: 228 YSGTDRG-SCKFDKKKIAASVANFSVVSLDEDQIAANLVKNGPLAIALNAVYMQTYVGGV 286

Query: 301 SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
           SCPYICS+RLDHGVLLVGYGS  Y+PIRLKEKPYWIIKNSWGE+WGENGYYKICRGRN+C
Sbjct: 287 SCPYICSKRLDHGVLLVGYGSGAYSPIRLKEKPYWIIKNSWGETWGENGYYKICRGRNIC 346

Query: 361 GVDSMVSTVAAA 372
           GVDSMVSTVAA 
Sbjct: 347 GVDSMVSTVAAV 358


>gi|356545108|ref|XP_003540987.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 365

 Score =  584 bits (1506), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 279/372 (75%), Positives = 321/372 (86%), Gaps = 14/372 (3%)

Query: 1   MGSKTVVLFLVSL-VVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH 59
           M + T+ L LV+  +VF+AVS+ +   + + LI QV DGGD             LGAEHH
Sbjct: 1   MNNPTLFLLLVAFSLVFAAVSASSDGGNEEPLIMQVVDGGDV-----------RLGAEHH 49

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK++F KAY S++EHD+R+ +FKAN+RRA RHQ LDPSA HG+T+FSDLTP+EFR  
Sbjct: 50  FLEFKRRFGKAYDSEDEHDYRYKVFKANMRRARRHQSLDPSAAHGVTRFSDLTPSEFRNK 109

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
            LGLR  +RLP DA++APILPT++LP+DFDWR+ GAV PVK+QGSCGSCWSFSTTGALEG
Sbjct: 110 VLGLR-GVRLPLDANKAPILPTDNLPSDFDWRDHGAVTPVKNQGSCGSCWSFSTTGALEG 168

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
           A+FL+TG+LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY LK+GG+MREEDY
Sbjct: 169 AHFLSTGELVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYILKSGGVMREEDY 228

Query: 240 PYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGG 299
           PY+G D G  CKFDK+KIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA YMQTYIGG
Sbjct: 229 PYSGADSG-TCKFDKTKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAAYMQTYIGG 287

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV 359
           VSCPY+CSRRL+HGVLLVGYGS  YAPIR+KEKP+WIIKNSWGE+WGENGYYKICRGRN+
Sbjct: 288 VSCPYVCSRRLNHGVLLVGYGSGAYAPIRMKEKPFWIIKNSWGENWGENGYYKICRGRNI 347

Query: 360 CGVDSMVSTVAA 371
           CGVDSMVSTVA+
Sbjct: 348 CGVDSMVSTVAS 359


>gi|297801998|ref|XP_002868883.1| hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314719|gb|EFH45142.1| hypothetical protein ARALYDRAFT_490677 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 277/367 (75%), Positives = 311/367 (84%), Gaps = 13/367 (3%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKK 66
           V  L  L+V  +VSS  + D  D +IRQV  G +            +L +E HFSLFK K
Sbjct: 10  VFVLFFLIV--SVSSSDVNDGDDLVIRQVVGGAEP----------QVLTSEDHFSLFKSK 57

Query: 67  FNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRK 126
           F K YAS EEHD+RF++FKANLRRA RHQKLDPSA HG+TQFSDLT +EFR+ +LG+R  
Sbjct: 58  FGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSARHGVTQFSDLTRSEFRKKHLGVRAG 117

Query: 127 LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG 186
            +LPKDA++APILPT +LP DFDWR++GAV PVK+QGSCGSCWSFS TGALEGANFLATG
Sbjct: 118 FKLPKDANKAPILPTENLPEDFDWRDRGAVTPVKNQGSCGSCWSFSATGALEGANFLATG 177

Query: 187 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 246
           KLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLK GGLM+EEDYPYTG D 
Sbjct: 178 KLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKD- 236

Query: 247 GHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC 306
           G  CK DKSKI ASV+NFSV+S+DE+QIAANLVKNGPLAVAINA YMQTYIGGVSCPYIC
Sbjct: 237 GKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYIC 296

Query: 307 SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMV 366
           +RRL+HGVLLVGYGSAGYAP R KEKPYWIIKNSWGE+WGENG+YKIC+GRN+CGVDS+V
Sbjct: 297 TRRLNHGVLLVGYGSAGYAPARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSLV 356

Query: 367 STVAAAV 373
           STV AAV
Sbjct: 357 STVTAAV 363


>gi|223049408|gb|ACM80348.1| cysteine proteinase [Solanum lycopersicum]
          Length = 368

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 280/375 (74%), Positives = 320/375 (85%), Gaps = 16/375 (4%)

Query: 1   MGSKTVVLFLVSLVVFS----AVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGA 56
           M  +  ++F++S+++ +    AV+      D D LIRQV   GDE   HH      +L A
Sbjct: 1   MAHRFSLVFVLSILLTTSFLLAVNGEIKGGDDDILIRQVV--GDE--DHH------MLNA 50

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           EHHF+LFKK+F K YAS EEH +RF++FKANLRRA RHQKLDPSA HG+TQFSD+TP EF
Sbjct: 51  EHHFTLFKKRFGKTYASDEEHHYRFSVFKANLRRAMRHQKLDPSAVHGVTQFSDMTPDEF 110

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
            + +LG+ R+LR P DA++APILPT DLP+DFDWRE GAV PVK+QGSCGSCWSFSTTGA
Sbjct: 111 SQKFLGVNRRLRFPSDANKAPILPTEDLPSDFDWREHGAVTPVKNQGSCGSCWSFSTTGA 170

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LEGANFLATGKLVSLSEQQLVDCDHECDPEE  SCDSGC+GGLMNSAFEYTLKAGGLMRE
Sbjct: 171 LEGANFLATGKLVSLSEQQLVDCDHECDPEEKDSCDSGCSGGLMNSAFEYTLKAGGLMRE 230

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTY 296
           EDYPYTGTD+   CKFD +K+AA VANFSVVSLDE+QIAANLVKNGPLAVAINAV+MQTY
Sbjct: 231 EDYPYTGTDKA-TCKFDNTKVAAKVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTY 289

Query: 297 IGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
           +GGVSCPYICS++LDHGVLLVGYG+ G++PIR+KEKPYWIIKNSWGE WGE+GYYKI RG
Sbjct: 290 VGGVSCPYICSKQLDHGVLLVGYGT-GFSPIRMKEKPYWIIKNSWGEKWGESGYYKIRRG 348

Query: 357 RNVCGVDSMVSTVAA 371
           RNVCGVDSMVSTVAA
Sbjct: 349 RNVCGVDSMVSTVAA 363


>gi|356541074|ref|XP_003539008.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 363

 Score =  579 bits (1492), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 278/366 (75%), Positives = 315/366 (86%), Gaps = 15/366 (4%)

Query: 6   VVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           ++ FLV   VF A S+     D + LI QV +G           +   LGAEHHF  FK+
Sbjct: 7   IIFFLVIFSVFFAASADG--GDDEPLIMQVVEG-----------SGVRLGAEHHFLDFKR 53

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           +F KAYASQEEH++RF +FKAN+RRA RHQ LDPSA HG+T+FSDLT +EFR   LGLR 
Sbjct: 54  RFGKAYASQEEHNYRFEVFKANMRRARRHQSLDPSAAHGVTRFSDLTASEFRNKVLGLR- 112

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
            +RLP +A++APILPT++LP+DFDWR+ GAV PVK+QGSCGSCWSFSTTGALEGA+FL+T
Sbjct: 113 GVRLPSNANKAPILPTDNLPSDFDWRDHGAVTPVKNQGSCGSCWSFSTTGALEGAHFLST 172

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           G+LVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEY LK+GG+MREEDYPY+GTD
Sbjct: 173 GELVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYILKSGGVMREEDYPYSGTD 232

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
           RG+ CKFDK+KIAASVANFSV+SLDEDQIAANLVKNGPLAVAINA YMQTYIGGVSCPYI
Sbjct: 233 RGN-CKFDKAKIAASVANFSVISLDEDQIAANLVKNGPLAVAINAAYMQTYIGGVSCPYI 291

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
           CSRRLDHGVLLVGYGS  YAPIR+KEKP+WIIKNSWGE+WGENGYYKICRGRN+CGVDSM
Sbjct: 292 CSRRLDHGVLLVGYGSGAYAPIRMKEKPFWIIKNSWGENWGENGYYKICRGRNICGVDSM 351

Query: 366 VSTVAA 371
           VSTVAA
Sbjct: 352 VSTVAA 357


>gi|297824991|ref|XP_002880378.1| hypothetical protein ARALYDRAFT_481008 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297326217|gb|EFH56637.1| hypothetical protein ARALYDRAFT_481008 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 360

 Score =  576 bits (1485), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 279/368 (75%), Positives = 316/368 (85%), Gaps = 15/368 (4%)

Query: 7   VLFLVSLV-VFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           VLF VSL+ VF +VS   +  D D LIRQV D  +            +L +E HF+LFKK
Sbjct: 6   VLFSVSLLFVFVSVS---ICGDEDLLIRQVVDEAEP----------KVLSSEDHFTLFKK 52

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           KF K Y S EEH +RF++FKANLRRA RHQK+DPSA HG+TQFSDLT +EFRR +LG+  
Sbjct: 53  KFGKDYGSIEEHYYRFSVFKANLRRAMRHQKMDPSARHGVTQFSDLTGSEFRRKHLGVTG 112

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
             +LPKDA+QAPILPT++LP +FDWR++GAV PVK+QGSCGSCWSFSTTGALEGA+FLAT
Sbjct: 113 GFKLPKDANQAPILPTHNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLAT 172

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           GKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLK GGLMREEDYPYTGTD
Sbjct: 173 GKLVSLSEQQLVDCDHECDPEEAGSCDSGCNGGLMNSAFEYTLKTGGLMREEDYPYTGTD 232

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
            G +CK D+SKI ASV+NFSVVS++EDQIAANLVKNGPLAVAINA YMQTYIGGVSCPYI
Sbjct: 233 -GGSCKLDRSKIVASVSNFSVVSINEDQIAANLVKNGPLAVAINAAYMQTYIGGVSCPYI 291

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
           CSRRL+HGVLL+GYGS+GY+  RLKEKPYWIIKNSWGESWGENG+YKIC+GRN+CGVDS+
Sbjct: 292 CSRRLNHGVLLMGYGSSGYSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 351

Query: 366 VSTVAAAV 373
           VSTVAAA 
Sbjct: 352 VSTVAAAT 359


>gi|317106675|dbj|BAJ53178.1| JHL18I08.12 [Jatropha curcas]
          Length = 368

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 275/372 (73%), Positives = 315/372 (84%), Gaps = 12/372 (3%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQ-LIRQVTDGGDEILSHHESTNNDLLGAEHH 59
           M  + ++ FLV  ++   ++S T  D++D  LIRQV   GD+         + LL AEHH
Sbjct: 1   MERRCLISFLVYALLSFTIASTTSPDELDDPLIRQVVPDGDQ---------DHLLNAEHH 51

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F+ FK KF K YA+QEEHD+RF +FKANLRRA +HQ +DP+A HG+T FSDLTP EFRR 
Sbjct: 52  FTTFKAKFGKTYATQEEHDYRFKLFKANLRRARKHQMMDPTAVHGVTMFSDLTPREFRRQ 111

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           YLGLRR LRLP DA +APILPTNDLP DFDWR+ GAV  VK+QGSCGSCWSFS  GALEG
Sbjct: 112 YLGLRR-LRLPADAHEAPILPTNDLPTDFDWRDHGAVTNVKNQGSCGSCWSFSAAGALEG 170

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
           A+FLATG+LVSLSEQQLVDCDHECDPEE G+CDSGCNGGLM +AFEYTLKAGGL REEDY
Sbjct: 171 AHFLATGELVSLSEQQLVDCDHECDPEEYGACDSGCNGGLMTTAFEYTLKAGGLEREEDY 230

Query: 240 PYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGG 299
           PYTG DRG  CKFD++KI ASV+NFSVVS+DEDQIAANLVK+GPLAV INAV+MQTY+GG
Sbjct: 231 PYTGNDRG-PCKFDRNKIVASVSNFSVVSIDEDQIAANLVKHGPLAVGINAVFMQTYMGG 289

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV 359
           VSCPYICS+R DHGVLLVGYGSAGYAPIRLK+KP+WIIKNSWGESWGENGYY+ICRGRN+
Sbjct: 290 VSCPYICSKRQDHGVLLVGYGSAGYAPIRLKDKPFWIIKNSWGESWGENGYYRICRGRNI 349

Query: 360 CGVDSMVSTVAA 371
           CGVD+MVS+VAA
Sbjct: 350 CGVDAMVSSVAA 361


>gi|18399697|ref|NP_565512.1| putative cysteine proteinase A494 [Arabidopsis thaliana]
 gi|12643282|sp|P43295.2|A494_ARATH RecName: Full=Probable cysteine proteinase A494; Flags: Precursor
 gi|4567274|gb|AAD23687.1| cysteine proteinase [Arabidopsis thaliana]
 gi|116325924|gb|ABJ98563.1| At2g21430 [Arabidopsis thaliana]
 gi|330252083|gb|AEC07177.1| putative cysteine proteinase A494 [Arabidopsis thaliana]
          Length = 361

 Score =  575 bits (1481), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 277/367 (75%), Positives = 314/367 (85%), Gaps = 15/367 (4%)

Query: 7   VLFLVSLV-VFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           VLF VSL+ VF +VS   +  D D LIRQV D           T   +L +E HF+LFKK
Sbjct: 7   VLFSVSLIFVFVSVS---VCGDEDVLIRQVVD----------ETEPKVLSSEDHFTLFKK 53

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           KF K Y S EEH +RF++FKANL RA RHQK+DPSA HG+TQFSDLT +EFRR +LG++ 
Sbjct: 54  KFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKG 113

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
             +LPKDA+QAPILPT +LP +FDWR++GAV PVK+QGSCGSCWSFSTTGALEGA+FLAT
Sbjct: 114 GFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLAT 173

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           GKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLK GGLMRE+DYPYTGTD
Sbjct: 174 GKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTD 233

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
            G +CK D+SKI ASV+NFSVVS++EDQIAANL+KNGPLAVAINA YMQTYIGGVSCPYI
Sbjct: 234 -GGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYI 292

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
           CSRRL+HGVLLVGYGSAG++  RLKEKPYWIIKNSWGESWGENG+YKIC+GRN+CGVDS+
Sbjct: 293 CSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 352

Query: 366 VSTVAAA 372
           VSTVAA 
Sbjct: 353 VSTVAAT 359


>gi|18420375|ref|NP_568052.1| cysteine proteinase RD19a [Arabidopsis thaliana]
 gi|1172872|sp|P43296.1|RD19A_ARATH RecName: Full=Cysteine proteinase RD19a; Short=RD19; Flags:
           Precursor
 gi|435618|dbj|BAA02373.1| thiol protease [Arabidopsis thaliana]
 gi|4539328|emb|CAB38829.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|7270892|emb|CAB80572.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|19310552|gb|AAL85009.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]
 gi|22136868|gb|AAM91778.1| putative cysteine proteinase RD19A [Arabidopsis thaliana]
 gi|110740898|dbj|BAE98545.1| drought-inducible cysteine proteinase RD19A precursor [Arabidopsis
           thaliana]
 gi|332661616|gb|AEE87016.1| cysteine proteinase RD19a [Arabidopsis thaliana]
          Length = 368

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 270/348 (77%), Positives = 301/348 (86%), Gaps = 11/348 (3%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D  D +IRQV  G +            +L +E HFSLFK+KF K YAS EEHD+RF++FK
Sbjct: 27  DGDDLVIRQVVGGAEP----------QVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFK 76

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           ANLRRA RHQKLDPSATHG+TQFSDLT +EFR+ +LG+R   +LPKDA++APILPT +LP
Sbjct: 77  ANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLPKDANKAPILPTENLP 136

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            DFDWR+ GAV PVK+QGSCGSCWSFS TGALEGANFLATGKLVSLSEQQLVDCDHECDP
Sbjct: 137 EDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDP 196

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
           EE  SCDSGCNGGLMNSAFEYTLK GGLM+EEDYPYTG D G  CK DKSKI ASV+NFS
Sbjct: 197 EEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKD-GKTCKLDKSKIVASVSNFS 255

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           V+S+DE+QIAANLVKNGPLAVAINA YMQTYIGGVSCPYIC+RRL+HGVLLVGYG+AGYA
Sbjct: 256 VISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYA 315

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAAV 373
           P R KEKPYWIIKNSWGE+WGENG+YKIC+GRN+CGVDSMVSTVAA V
Sbjct: 316 PARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATV 363


>gi|356509908|ref|XP_003523684.1| PREDICTED: cysteine proteinase RD19a-like [Glycine max]
          Length = 366

 Score =  573 bits (1476), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 282/366 (77%), Positives = 306/366 (83%), Gaps = 12/366 (3%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDVDQL-IRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           +LF   L+  +AV++   IDD D L IRQV    ++   HH      LL AEHHFS FK 
Sbjct: 6   ILFFGLLLFSAAVATVERIDDEDNLLIRQVVPDAED---HH------LLNAEHHFSAFKT 56

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           KF K YA+QEEHDHRF IFK NL RA  HQKLDPSA HG+T+FSDLTP+EFR  +LGL+ 
Sbjct: 57  KFAKTYATQEEHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTRFSDLTPSEFRGQFLGLK- 115

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
            LRLP DA +APILPT+DLP DFDWR+ GAV  VK+QGSCGSCWSFS  GALEGA+FL+T
Sbjct: 116 PLRLPSDAQKAPILPTSDLPTDFDWRDHGAVTGVKNQGSCGSCWSFSAVGALEGAHFLST 175

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           G LVSLSEQQLVDCDHECDPEE G+CDSGCNGGLM +AFEYTLKAGGLMREEDYPYTG D
Sbjct: 176 GGLVSLSEQQLVDCDHECDPEERGACDSGCNGGLMTTAFEYTLKAGGLMREEDYPYTGRD 235

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
           RG  CKFDKSKIAASVANFSVVSLDE+QIAANLVKNGPLAV INAV+MQTYIGGVSCPYI
Sbjct: 236 RG-PCKFDKSKIAASVANFSVVSLDEEQIAANLVKNGPLAVGINAVFMQTYIGGVSCPYI 294

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
           C + LDHGVLLVGYGS  YAPIR KEKPYWIIKNSWGESWGE GYYKICRGRNVCGVDSM
Sbjct: 295 CGKHLDHGVLLVGYGSGAYAPIRFKEKPYWIIKNSWGESWGEEGYYKICRGRNVCGVDSM 354

Query: 366 VSTVAA 371
           VSTVAA
Sbjct: 355 VSTVAA 360


>gi|94556727|gb|ABF46642.1| papain-like cysteine proteinase [Pachysandra terminalis]
          Length = 374

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 283/373 (75%), Positives = 311/373 (83%), Gaps = 9/373 (2%)

Query: 3   SKTVVLFLVSLVVFSAVSSGTLIDDVDQL-IRQVTDGGDEILSHHESTNNDLLGAEHHFS 61
           S+ V+L   S +VF+A +S    D+ D L IRQV  G D+  +     N     AEHHFS
Sbjct: 5   SRFVLLLFSSSLVFAATASTVSSDESDDLLIRQVVAGADDHDNDDLLLN-----AEHHFS 59

Query: 62  LFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL 121
            FKK+F KAY S +EHD RF +FKANLRRA R+Q LDPSA HG+TQF DLTPAEFRRTYL
Sbjct: 60  SFKKRFGKAYTSCDEHDRRFGVFKANLRRAKRNQILDPSAVHGVTQFFDLTPAEFRRTYL 119

Query: 122 GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
           GL+R LRLP D  +APILPTNDLPADFDWR+ GAV PVK+QGSCGSCWSFS TGALEGAN
Sbjct: 120 GLKR-LRLPADTHEAPILPTNDLPADFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGAN 178

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
           FLATGKLVSLSEQQLVDCDH CD E+P SCDSGCNGGLM SAFEYTLKAGGL REEDYPY
Sbjct: 179 FLATGKLVSLSEQQLVDCDHVCDSEDPSSCDSGCNGGLMTSAFEYTLKAGGLEREEDYPY 238

Query: 242 TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVS 301
           TGTD    CKFDK+KIA S +NFSVVSLDE+QIAANLV NGPLA+ INA++MQTYIGGVS
Sbjct: 239 TGTDHSK-CKFDKTKIAVSASNFSVVSLDENQIAANLVTNGPLAIGINAMFMQTYIGGVS 297

Query: 302 CPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
           CPYICS+R LDHGVLLVGYGSAG+APIR KEKPYWIIKNSWGESWGE GYYKICRGRN+C
Sbjct: 298 CPYICSKRLLDHGVLLVGYGSAGFAPIRFKEKPYWIIKNSWGESWGEKGYYKICRGRNIC 357

Query: 361 GVDSMVSTVAAAV 373
           G+DSMVS VAAAV
Sbjct: 358 GMDSMVSAVAAAV 370


>gi|21593213|gb|AAM65162.1| cysteine proteinase RD19A [Arabidopsis thaliana]
          Length = 368

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 269/348 (77%), Positives = 301/348 (86%), Gaps = 11/348 (3%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D  D +IRQV  G +            +L +E HFSLFK+KF K YAS EEHD+RF++FK
Sbjct: 27  DGDDLVIRQVVGGAEP----------QVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFK 76

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           ANLRRA RHQKLDPSATHG+TQFSDLT +EFR+ +LG+R   +LPKDA++APILPT +LP
Sbjct: 77  ANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLPKDANKAPILPTENLP 136

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            DFDWR+ GAV PVK+QGSCGSCWSFS TGALEGANFLATGKLVSLSEQQLVDCDHECDP
Sbjct: 137 EDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDP 196

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
           EE  SCDSGCNGGLMNSAFE+TLK GGLM+EEDYPYTG D G  CK DKSKI ASV+NFS
Sbjct: 197 EEADSCDSGCNGGLMNSAFEHTLKTGGLMKEEDYPYTGKD-GKTCKLDKSKIVASVSNFS 255

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           V+S+DE+QIAANLVKNGPLAVAINA YMQTYIGGVSCPYIC+RRL+HGVLLVGYG+AGYA
Sbjct: 256 VISIDEEQIAANLVKNGPLAVAINAGYMQTYIGGVSCPYICTRRLNHGVLLVGYGAAGYA 315

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAAV 373
           P R KEKPYWIIKNSWGE+WGENG+YKIC+GRN+CGVDSMVSTVAA V
Sbjct: 316 PARFKEKPYWIIKNSWGETWGENGFYKICKGRNICGVDSMVSTVAATV 363


>gi|51969854|dbj|BAD43619.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 361

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/367 (75%), Positives = 313/367 (85%), Gaps = 15/367 (4%)

Query: 7   VLFLVSLV-VFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           VLF VSL+ VF +VS   +  D D LIRQV D           T   +L +E HF+LFKK
Sbjct: 7   VLFSVSLIFVFVSVS---VCGDEDVLIRQVVD----------ETEPKVLSSEDHFTLFKK 53

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           KF K Y S EEH +RF++FKANL RA RHQK+DPSA HG+TQFSDLT +EFRR +LG++ 
Sbjct: 54  KFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKG 113

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
             +LPKDA+QAPILPT +LP +FDWR++GAV PVK+QGSCGSCWSFSTTGALEGA+FLAT
Sbjct: 114 GFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLAT 173

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           GKLVSLSEQQLVDCDHECDPEE GSCDSGCNG LMNSAFEYTLK GGLMRE+DYPYTGTD
Sbjct: 174 GKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGRLMNSAFEYTLKTGGLMREKDYPYTGTD 233

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
            G +CK D+SKI ASV+NFSVVS++EDQIAANL+KNGPLAVAINA YMQTYIGGVSCPYI
Sbjct: 234 -GGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGVSCPYI 292

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
           CSRRL+HGVLLVGYGSAG++  RLKEKPYWIIKNSWGESWGENG+YKIC+GRN+CGVDS+
Sbjct: 293 CSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNICGVDSL 352

Query: 366 VSTVAAA 372
           VSTVAA 
Sbjct: 353 VSTVAAT 359


>gi|449516391|ref|XP_004165230.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 387

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 273/355 (76%), Positives = 307/355 (86%), Gaps = 10/355 (2%)

Query: 19  VSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHD 78
           VS  ++  D D LIRQV +  D   +HH       LGAEHHFSLFK++F K+YA++EEHD
Sbjct: 25  VSQHSVEHDGDPLIRQVVEN-DGDFNHHA------LGAEHHFSLFKRRFGKSYATEEEHD 77

Query: 79  HRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAP 137
            RF IFKAN+RRA RHQ  DPSA HG+TQFSDLTP EFR+ +LGLR  +LRLP D + AP
Sbjct: 78  RRFKIFKANMRRAERHQSFDPSAIHGVTQFSDLTPFEFRKAFLGLRGHRLRLPVDTNAAP 137

Query: 138 ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLV 197
           ILPT +LP DFDWR+ G V  VK+QGSCGSCWSFSTTGALEGANFLATG+LVSLSEQQLV
Sbjct: 138 ILPTENLPIDFDWRQHGGVTRVKNQGSCGSCWSFSTTGALEGANFLATGELVSLSEQQLV 197

Query: 198 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI 257
           DCDHECDPEE  +CDSGCNGGLMNSAFEYTLKAGGLM+E+DYPY G DR + C FDKSKI
Sbjct: 198 DCDHECDPEEEDACDSGCNGGLMNSAFEYTLKAGGLMKEQDYPYAGIDR-NTCNFDKSKI 256

Query: 258 AASVANFSVV-SLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLL 316
           AAS+ANFSVV S+DEDQIAANLVKNGPLA+AINAV+MQTYIGGVSCP+ICS+RLDHGVLL
Sbjct: 257 AASIANFSVVNSIDEDQIAANLVKNGPLAIAINAVFMQTYIGGVSCPFICSKRLDHGVLL 316

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           VGYGSAGYAPIR+++K YWIIKNSWGESWGENGYYKICRGRN+CGVDS+VSTVAA
Sbjct: 317 VGYGSAGYAPIRMRDKDYWIIKNSWGESWGENGYYKICRGRNICGVDSLVSTVAA 371


>gi|224066056|ref|XP_002302004.1| predicted protein [Populus trichocarpa]
 gi|222843730|gb|EEE81277.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 270/356 (75%), Positives = 307/356 (86%), Gaps = 12/356 (3%)

Query: 17  SAVSSGTLIDDVDQ-LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQE 75
           SAV+S    +D+D  LIRQV   G++          DLL AEHHF+ FK KF K YA+QE
Sbjct: 17  SAVASTVSSNDLDDPLIRQVVSDGED----------DLLNAEHHFTSFKSKFGKTYATQE 66

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQ 135
           EHD+RF +FKANLRRA +HQ +DP+A HGIT+FSDLTP EFRR +LGL+R LRLP DA++
Sbjct: 67  EHDYRFGVFKANLRRAKKHQMIDPTAAHGITKFSDLTPKEFRRQFLGLKRWLRLPTDANK 126

Query: 136 APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQ 195
           APILPT DLP D+DWR+ GAV  VKDQGSCGSCWSFS TGALEGA++LATG+L SLSEQQ
Sbjct: 127 APILPTTDLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQ 186

Query: 196 LVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKS 255
           LVDCDHECDPEE G+CDSGC+GGLMN+AFEY LKAGGL REEDYPYTGTD G  CKFDKS
Sbjct: 187 LVDCDHECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTD-GGTCKFDKS 245

Query: 256 KIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 315
           K+ ASV+NFSVVS+DEDQIAANLVK+GPL+VAINA +MQTY+GGVSCPYICS+R DHGVL
Sbjct: 246 KVVASVSNFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGGVSCPYICSKRQDHGVL 305

Query: 316 LVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           LVGYGSAGYAPIR KEKP+WIIKNSWG++WGENGYYKICRGRN+CGVDSMVSTVAA
Sbjct: 306 LVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAA 361


>gi|359806140|ref|NP_001241450.1| uncharacterized protein LOC100778716 precursor [Glycine max]
 gi|255639509|gb|ACU20049.1| unknown [Glycine max]
          Length = 366

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 278/356 (78%), Positives = 302/356 (84%), Gaps = 12/356 (3%)

Query: 17  SAVSSGTLIDDVDQL-IRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQE 75
           + V++   IDD D L IRQV    ++   HH      LL AEHHFS FK KF K YA+QE
Sbjct: 16  ATVAAAERIDDEDDLLIRQVVPDAED---HH------LLNAEHHFSAFKTKFGKTYATQE 66

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQ 135
           EHDHRF IFK NL RA  HQKLDPSA HG+T+FSDLTPAEFRR +LGL+  LRLP DA +
Sbjct: 67  EHDHRFRIFKNNLLRAKSHQKLDPSAVHGVTRFSDLTPAEFRRQFLGLK-PLRLPSDAQK 125

Query: 136 APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQ 195
           APILPTNDLP DFDWRE GAV  VK+QGSCGSCWSFS  GALEGA+FL+TG+LVSLSEQQ
Sbjct: 126 APILPTNDLPTDFDWREHGAVTGVKNQGSCGSCWSFSAVGALEGAHFLSTGELVSLSEQQ 185

Query: 196 LVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKS 255
           LVDCDHECDPEE G+CDSGCNGGLM +AFEYTL+AGGLMRE+DYPYTG DRG  CKFDKS
Sbjct: 186 LVDCDHECDPEERGACDSGCNGGLMTTAFEYTLQAGGLMREKDYPYTGRDRG-PCKFDKS 244

Query: 256 KIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 315
           K+AASVANFSVVSLDE+QIAANLV+NGPLAV INAV+MQTYIGGVSCPYIC + LDHGVL
Sbjct: 245 KVAASVANFSVVSLDEEQIAANLVQNGPLAVGINAVFMQTYIGGVSCPYICGKHLDHGVL 304

Query: 316 LVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           LVGYGS  YAPIR KEKPYWIIKNSWGESWGE GYYKICRGRNVCGVDSMVSTVAA
Sbjct: 305 LVGYGSGAYAPIRFKEKPYWIIKNSWGESWGEEGYYKICRGRNVCGVDSMVSTVAA 360


>gi|118489556|gb|ABK96580.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 367

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 269/357 (75%), Positives = 307/357 (85%), Gaps = 14/357 (3%)

Query: 15  VFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQ 74
           V S VSS  L D +  +I+ V+DG D           DLL AEHHF+ FK KF K YA+Q
Sbjct: 19  VASTVSSTDLDDPL--IIQVVSDGED-----------DLLNAEHHFTSFKSKFGKTYATQ 65

Query: 75  EEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDAD 134
           EEHD+RF +FKANLRRA +HQ +DP+A HG+T+FSDLTP EFRR +LGL+R+LRLP DA+
Sbjct: 66  EEHDYRFGVFKANLRRAKKHQMIDPTAAHGVTKFSDLTPKEFRRQFLGLKRRLRLPTDAN 125

Query: 135 QAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQ 194
           +APILPT DLP D+DWR+ GAV  VKDQGSCGSCWSFS TGALEGA++LATG+L SLSEQ
Sbjct: 126 KAPILPTTDLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQ 185

Query: 195 QLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDK 254
           QLVDCDHECDPEE G+CDSGC+GGLMN+AFEY LKAGGL REEDYPYTGTD G  CKFDK
Sbjct: 186 QLVDCDHECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTD-GGTCKFDK 244

Query: 255 SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGV 314
           SK+ ASV+NFSVVS+DEDQIAANLVK+GPL+VAINA +MQTY+GGVSCPYICS+R DHGV
Sbjct: 245 SKVVASVSNFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGGVSCPYICSKRQDHGV 304

Query: 315 LLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           LLVGYGSAGYAPIR KEKP+WIIKNSWG++WGENGYYKICRGRN+CGVDSMVSTVAA
Sbjct: 305 LLVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAA 361


>gi|118485796|gb|ABK94746.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 269/356 (75%), Positives = 306/356 (85%), Gaps = 12/356 (3%)

Query: 17  SAVSSGTLIDDVDQ-LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQE 75
           SAV+S    +D+D  LIRQV   G++          DLL AEHHF+ FK KF K YA+QE
Sbjct: 17  SAVASTVSSNDLDDPLIRQVVSDGED----------DLLNAEHHFTSFKSKFGKTYATQE 66

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQ 135
           EHD+RF +FKANLRRA +HQ +DP+A HGIT+FSDLTP EFRR +LGL+R LRLP DA++
Sbjct: 67  EHDYRFGVFKANLRRAKKHQMIDPTAAHGITKFSDLTPKEFRRQFLGLKRWLRLPTDANK 126

Query: 136 APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQ 195
           APILPT DLP D+DWR+ GAV  VKDQGSCGSCWSFS TGALEGA++LATG+L SLSEQQ
Sbjct: 127 APILPTTDLPTDYDWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQ 186

Query: 196 LVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKS 255
           LVDCDHECDPEE G+CDSGC+GGLMN+AFEY LKAGGL RE DYPYTGTD G  CKFDKS
Sbjct: 187 LVDCDHECDPEEYGACDSGCDGGLMNNAFEYALKAGGLEREADYPYTGTD-GGTCKFDKS 245

Query: 256 KIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 315
           K+ ASV+NFSVVS+DEDQIAANLVK+GPL+VAINA +MQTY+GGVSCPYICS+R DHGVL
Sbjct: 246 KVVASVSNFSVVSIDEDQIAANLVKHGPLSVAINAAFMQTYVGGVSCPYICSKRQDHGVL 305

Query: 316 LVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           LVGYGSAGYAPIR KEKP+WIIKNSWG++WGENGYYKICRGRN+CGVDSMVSTVAA
Sbjct: 306 LVGYGSAGYAPIRFKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAA 361


>gi|118485910|gb|ABK94801.1| unknown [Populus trichocarpa]
          Length = 367

 Score =  565 bits (1457), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 263/343 (76%), Positives = 299/343 (87%), Gaps = 11/343 (3%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D LI QV   G++          DLL AEHHF+ FK KF K YA+QEEHD+RF +FKANL
Sbjct: 30  DPLIIQVVSDGED----------DLLNAEHHFTSFKSKFGKTYATQEEHDYRFGVFKANL 79

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
           RRA +HQ +DP+A HG+T+FSDLTP EFRR +LGL+R+LRLP DA++APILPT DLP D+
Sbjct: 80  RRAKKHQMIDPTAAHGVTKFSDLTPKEFRRQFLGLKRRLRLPTDANKAPILPTTDLPTDY 139

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWR+ GAV  VKDQGSCGSCWSFS TGALEGA++LATG+L SLSEQQLVDCDHECDPEE 
Sbjct: 140 DWRDHGAVTEVKDQGSCGSCWSFSATGALEGAHYLATGELASLSEQQLVDCDHECDPEEY 199

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
           G+CDSGC+GGLMN+AFEY LKAGGL REEDYPYTGTD G  CKFDKSK+ ASV+NFSVVS
Sbjct: 200 GACDSGCDGGLMNNAFEYALKAGGLEREEDYPYTGTDGG-TCKFDKSKVVASVSNFSVVS 258

Query: 269 LDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIR 328
           +DEDQIAANLVK+GPL+VAINA +MQTY+GGVSCPYICS+R DHGVLLVGYGSAGYAPIR
Sbjct: 259 IDEDQIAANLVKHGPLSVAINAAFMQTYVGGVSCPYICSKRQDHGVLLVGYGSAGYAPIR 318

Query: 329 LKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
            KEKP+WIIKNSWG++WGENGYYKICRGRN+CGVDSMVSTVAA
Sbjct: 319 FKEKPFWIIKNSWGQNWGENGYYKICRGRNICGVDSMVSTVAA 361


>gi|225431287|ref|XP_002275759.1| PREDICTED: cysteine proteinase RD19a isoform 1 [Vitis vinifera]
 gi|297735094|emb|CBI17456.3| unnamed protein product [Vitis vinifera]
          Length = 367

 Score =  563 bits (1450), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 273/370 (73%), Positives = 307/370 (82%), Gaps = 14/370 (3%)

Query: 3   SKTVVLFLVSLVVFSA-VSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFS 61
           S++ +LFL+  ++FSA VS  +  +  D LIRQV   GD           DLL AEH F 
Sbjct: 5   SRSALLFLIPTLLFSAAVSDISSDESDDLLIRQVVPEGD-----------DLLSAEHQFG 53

Query: 62  LFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL 121
           LFK KF K Y++ EEHD+RF++F+ANLRRA RHQ LDPSA HG+T+FSDLTP EFRR YL
Sbjct: 54  LFKAKFGKTYSTVEEHDYRFSVFEANLRRARRHQLLDPSAVHGVTRFSDLTPDEFRRDYL 113

Query: 122 GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
           GL+  LRLP DA +APILPTNDLP DFDWR+ GAV PVKDQGSCGSCWSFS  GALEGA+
Sbjct: 114 GLK-PLRLPADAQKAPILPTNDLPTDFDWRDHGAVTPVKDQGSCGSCWSFSAIGALEGAH 172

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
           FL TG L+S+SEQQLVDCDHECDPEE G+CD GCNGGLM SAFEY LKAGG+ REE YPY
Sbjct: 173 FLTTGNLISMSEQQLVDCDHECDPEEYGACDQGCNGGLMTSAFEYILKAGGVEREETYPY 232

Query: 242 TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVS 301
            G+DRG +CKF+KS+I ASV+NFSVVSLDEDQIAAN+VKNGPLAV INAV+MQTY+ GVS
Sbjct: 233 IGSDRG-SCKFNKSQIVASVSNFSVVSLDEDQIAANMVKNGPLAVGINAVFMQTYMKGVS 291

Query: 302 CPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 361
           CPYICSR LDHGV+LVGYGSAGYAPIR KEKPYWIIKNSWGESWGE+GYYKICRG N CG
Sbjct: 292 CPYICSRNLDHGVVLVGYGSAGYAPIRFKEKPYWIIKNSWGESWGEDGYYKICRGHNACG 351

Query: 362 VDSMVSTVAA 371
           VDSMVSTVAA
Sbjct: 352 VDSMVSTVAA 361


>gi|255538808|ref|XP_002510469.1| cysteine protease, putative [Ricinus communis]
 gi|223551170|gb|EEF52656.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 269/367 (73%), Positives = 309/367 (84%), Gaps = 17/367 (4%)

Query: 10  LVSLVVFSAVSSGTLI----DDVDQ-LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFK 64
            +SL+VF+ +SS  L     D++D  LIRQV               + LL A+HHF+ FK
Sbjct: 6   FLSLIVFAFLSSSILFTATSDELDDPLIRQVV----------PDVEDYLLSAQHHFTAFK 55

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
            KF K YA+QEEHD+RF +FKANLRRA +HQ +DPSA HG+T+FSDLTP EFRR YLGL+
Sbjct: 56  AKFGKNYATQEEHDYRFKVFKANLRRAQKHQLMDPSAVHGVTKFSDLTPREFRRQYLGLK 115

Query: 125 RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
            KLRLP DA +APILPT+ +P DFDWR+ GAV  VK+QGSCGSCWSFS  GALEGA+FLA
Sbjct: 116 -KLRLPADAHEAPILPTDGIPEDFDWRDHGAVTNVKNQGSCGSCWSFSAAGALEGAHFLA 174

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TG+LVSLSEQQLVDCDHECDP E G+CDSGCNGGLM +AFEY LKAGGL REEDYPYTG+
Sbjct: 175 TGELVSLSEQQLVDCDHECDPTEYGACDSGCNGGLMTNAFEYILKAGGLEREEDYPYTGS 234

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY 304
           DRG  CKF+++KIAASV NFSVVS+DEDQIAANLV+NGPLAV INAV+MQTYIGGVSCPY
Sbjct: 235 DRG-PCKFERAKIAASVNNFSVVSVDEDQIAANLVQNGPLAVGINAVFMQTYIGGVSCPY 293

Query: 305 ICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDS 364
           ICS+R DHGV+LVGYGSAGYAP+RLK+KP+WIIKNSWGE+WGENGYYKICRGRNVCGVD+
Sbjct: 294 ICSKRQDHGVVLVGYGSAGYAPVRLKDKPFWIIKNSWGENWGENGYYKICRGRNVCGVDA 353

Query: 365 MVSTVAA 371
           MVSTVAA
Sbjct: 354 MVSTVAA 360


>gi|124484383|dbj|BAF46302.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 369

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 263/353 (74%), Positives = 301/353 (85%), Gaps = 18/353 (5%)

Query: 27  DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKA 86
           D D LIRQV   G++         + LL A+HHF+LFK K+ K+YA+QEEHD+R ++FKA
Sbjct: 23  DEDPLIRQVVSDGED---------DALLNADHHFTLFKSKYGKSYATQEEHDYRLSVFKA 73

Query: 87  NLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR------RKLRLPKDADQAPILP 140
           NLRRA RHQ LDPSA HG+T+FSDLTP EFRRT+LG+R      RKL+LP DA  A ILP
Sbjct: 74  NLRRAKRHQLLDPSAVHGVTKFSDLTPKEFRRTFLGIRKSSSGKRKLKLPADAHAAEILP 133

Query: 141 TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD 200
           T+DLP+DFDWR+ GAV  VKDQGSCGSCWSFSTTGALEGANFLATG+LVSLSEQQLVDCD
Sbjct: 134 TSDLPSDFDWRDYGAVTGVKDQGSCGSCWSFSTTGALEGANFLATGELVSLSEQQLVDCD 193

Query: 201 HECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAAS 260
           H CDPEE G+CDSGCNGGLM +A+EY L++GGL +E+DYPYTG D    CKFDKSKIAA+
Sbjct: 194 HLCDPEEAGACDSGCNGGLMTTAYEYVLQSGGLEKEKDYPYTGKD--GTCKFDKSKIAAA 251

Query: 261 VANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGY 319
           VANFSVVSLDEDQIAANLVK+GPL+V INAV+MQTYIGGVSCPYICS+R LDHGVLLVGY
Sbjct: 252 VANFSVVSLDEDQIAANLVKHGPLSVGINAVFMQTYIGGVSCPYICSKRNLDHGVLLVGY 311

Query: 320 GSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           G+AGYAPIR K+KPYWI+KNSWGE+WGE GYYKICRG N+CG+DSMVSTV AA
Sbjct: 312 GAAGYAPIRFKDKPYWIVKNSWGENWGEEGYYKICRGNNICGIDSMVSTVTAA 364


>gi|357438145|ref|XP_003589348.1| Cysteine proteinase [Medicago truncatula]
 gi|355478396|gb|AES59599.1| Cysteine proteinase [Medicago truncatula]
          Length = 364

 Score =  552 bits (1422), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/370 (72%), Positives = 310/370 (83%), Gaps = 18/370 (4%)

Query: 9   FLVSLVVFSAVSSGT--LIDDV---DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLF 63
           FL++L +F+ V++    L DD    D LIRQV D          +  + +L AEHHF+ F
Sbjct: 5   FLIALFLFATVATAATTLSDDTNSDDLLIRQVVD----------TAEDHILNAEHHFTSF 54

Query: 64  KKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL 123
           K KF+K YA++EEHD+RF +FK+NL +A  HQKLDPSA HGIT+FSDLT +EFRR +LGL
Sbjct: 55  KSKFSKNYATKEEHDYRFGVFKSNLIKAKLHQKLDPSAQHGITKFSDLTASEFRRQFLGL 114

Query: 124 RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
            ++LRLP  A +APILPTN+LP DFDWREKGAV PVKDQGSCGSCW+FSTTGALEGAN+L
Sbjct: 115 NKRLRLPAHAQKAPILPTNNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGANYL 174

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
           ATGKL SLSEQQLVDCDH CDPEE GSCDSGCNGGLMN+AFEY L++GG++ E+DY YTG
Sbjct: 175 ATGKLTSLSEQQLVDCDHVCDPEERGSCDSGCNGGLMNNAFEYILQSGGVVSEKDYAYTG 234

Query: 244 TDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP 303
            D   +CKFDKSK+ ASV+NFSVVSLDEDQIAANLVKNGPLAVAINA +MQTY+ GVSCP
Sbjct: 235 RD--GSCKFDKSKVVASVSNFSVVSLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCP 292

Query: 304 YICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGV 362
           YIC++ RLDHGVLL+G+G  GYAPIRLKEKPYWIIKNSWG++WGE GYYKICRGRNVCGV
Sbjct: 293 YICAKARLDHGVLLLGFGQGGYAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNVCGV 352

Query: 363 DSMVSTVAAA 372
           DSMVSTVAAA
Sbjct: 353 DSMVSTVAAA 362


>gi|164605518|dbj|BAF98584.1| CM0216.500.nc [Lotus japonicus]
          Length = 360

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 261/346 (75%), Positives = 296/346 (85%), Gaps = 15/346 (4%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D VD +I QV D             ++ LGAEHHF  FK++F K YA++EEH +RF +FK
Sbjct: 24  DGVDPMICQVVD-------------DEGLGAEHHFLEFKRRFGKVYATEEEHGYRFNVFK 70

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           +N+ RA RHQ LDPSA HG+T+FSDLTP EFR + LGLR  + LP DAD APILPT++LP
Sbjct: 71  SNMHRARRHQLLDPSAVHGVTRFSDLTPMEFRHSVLGLR-GVGLPSDADSAPILPTDNLP 129

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            DFDWRE GAV PVK+QGSCGSCWSFS TGALEGA+FL+TG+LVSLSEQQLVDCDH+CDP
Sbjct: 130 KDFDWREHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQCDP 189

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
           EE GSCDSGCNGGLMNSAFEY L  GG+MREEDYPY+GT+ G  CKFDK+KIAASVANFS
Sbjct: 190 EEAGSCDSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGG-TCKFDKAKIAASVANFS 248

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           VVS DEDQIAANLVKNGPLAVAINAVYMQTY+GGVSCPY+CS++L+HGVLLVGYGS  YA
Sbjct: 249 VVSRDEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYA 308

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           PIR+K+KPYWIIKNSWGE+WGENGYYKICRGRN+CGVDSMVSTVAA
Sbjct: 309 PIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAA 354


>gi|449461649|ref|XP_004148554.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD19a-like
           [Cucumis sativus]
          Length = 381

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 266/355 (74%), Positives = 300/355 (84%), Gaps = 16/355 (4%)

Query: 19  VSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHD 78
           VS  ++  D D LIRQV +  D   +HH       LGAEHHFSLFK++F K+YA++EEHD
Sbjct: 25  VSQHSVEHDGDPLIRQVVEN-DGDFNHHA------LGAEHHFSLFKRRFGKSYATEEEHD 77

Query: 79  HRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAP 137
            RF IFKAN+RRA RHQ  DPSA HG+TQFSDLTP EFR+ +LGLR  +LRLP D + AP
Sbjct: 78  RRFKIFKANMRRAERHQSFDPSAIHGVTQFSDLTPFEFRKAFLGLRGHRLRLPVDTNAAP 137

Query: 138 ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLV 197
           ILPT +LP DFDWR+ G V  VK+QGSCGSCWSFSTTGALEGANFL       LSEQQLV
Sbjct: 138 ILPTENLPIDFDWRQHGGVTRVKNQGSCGSCWSFSTTGALEGANFL------XLSEQQLV 191

Query: 198 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI 257
           DCDHECDPEE  +CDSGCNGGLMNSAFEYTLKAGGLM+E+DYPY G DR + C FDKSKI
Sbjct: 192 DCDHECDPEEEDACDSGCNGGLMNSAFEYTLKAGGLMKEQDYPYAGIDR-NTCNFDKSKI 250

Query: 258 AASVANFSVV-SLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLL 316
           AAS+A+FSVV S+DEDQIAANLVKNGPLA+AINAV+MQTYIGGVSCP+ICS+RLDHGVLL
Sbjct: 251 AASIASFSVVNSIDEDQIAANLVKNGPLAIAINAVFMQTYIGGVSCPFICSKRLDHGVLL 310

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           VGYGSAGYAPIR+++K YWIIKNSWGESWGENGYYKICRGRN+CGVDS+VSTVAA
Sbjct: 311 VGYGSAGYAPIRMRDKDYWIIKNSWGESWGENGYYKICRGRNICGVDSLVSTVAA 365


>gi|359492179|ref|XP_002280808.2| PREDICTED: cysteine proteinase RD19a-like [Vitis vinifera]
 gi|302142580|emb|CBI19783.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/356 (75%), Positives = 301/356 (84%), Gaps = 17/356 (4%)

Query: 16  FSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQE 75
            S VSS  L DD+  LIRQV            S ++DLL AEHHF+ FK +F K YA+ E
Sbjct: 22  MSDVSSNEL-DDL--LIRQVV-----------SNSDDLLSAEHHFAAFKARFRKTYATAE 67

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQ 135
           EHD+RF+IFKANLRRA R+Q LDPSA HG+T+FSDLTPAEFR+ YLGL+  LR P D  Q
Sbjct: 68  EHDYRFSIFKANLRRAKRNQLLDPSAVHGVTRFSDLTPAEFRQNYLGLK-PLRFPIDTQQ 126

Query: 136 APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQ 195
           APILPTNDLP DFDWR+ GAV  VKDQG CGSCWSFSTTGALEGA+FLATG LVSLSEQQ
Sbjct: 127 APILPTNDLPTDFDWRDHGAVTAVKDQGECGSCWSFSTTGALEGAHFLATGNLVSLSEQQ 186

Query: 196 LVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKS 255
           LVDCDHECDPEE G+CD GCNGGLMN+AFEY LKAGG++R EDYPYTGTD GH CKFDK+
Sbjct: 187 LVDCDHECDPEEYGACDRGCNGGLMNTAFEYILKAGGVVRGEDYPYTGTD-GH-CKFDKT 244

Query: 256 KIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVL 315
           KIAASV+NFS VS+DEDQIAANLVKNGPLAV INA++MQ+Y GGVSCP+ICS  L+HGVL
Sbjct: 245 KIAASVSNFSTVSIDEDQIAANLVKNGPLAVGINAIFMQSYAGGVSCPFICSTSLNHGVL 304

Query: 316 LVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           LVGYGSAGY+PIR KEKPYW++KNSWG++WGE+GYYKICRG N+CGVDSMVSTVAA
Sbjct: 305 LVGYGSAGYSPIRFKEKPYWLLKNSWGQNWGEHGYYKICRGHNICGVDSMVSTVAA 360


>gi|516865|emb|CAA52403.1| putative thiol protease [Arabidopsis thaliana]
          Length = 313

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 254/313 (81%), Positives = 286/313 (91%), Gaps = 1/313 (0%)

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTY 120
           +LFKKKF K Y S EEH +RF++FKANL RA RHQK+DPSA HG+TQFSDLT +EFRR +
Sbjct: 1   ALFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKH 60

Query: 121 LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
           LG++   +LPKDA+QAPILPT +LP +FDWR++GAV PVK+QGSCGSCWSFSTTGALEGA
Sbjct: 61  LGVKGGFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGA 120

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           +FLATGKLVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEYTLK GGLMRE+DYP
Sbjct: 121 HFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYP 180

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV 300
           YTGTD G +CK D+SKI ASV+NFSVVS++EDQIAANL+KNGPLAVAINA YMQTYIGGV
Sbjct: 181 YTGTD-GGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPLAVAINAAYMQTYIGGV 239

Query: 301 SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
           SCPYICSRRL+HGVLLVGYGSAG++  RLKEKPYWIIKNSWGESWGENG+YKIC+GRN+C
Sbjct: 240 SCPYICSRRLNHGVLLVGYGSAGFSQARLKEKPYWIIKNSWGESWGENGFYKICKGRNIC 299

Query: 361 GVDSMVSTVAAAV 373
           GVDS+VSTVAA  
Sbjct: 300 GVDSLVSTVAATT 312


>gi|5051468|emb|CAB44983.1| putative preprocysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  549 bits (1415), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 267/366 (72%), Positives = 302/366 (82%), Gaps = 14/366 (3%)

Query: 8   LFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKF 67
           LFL+SL+ F   SS     D D LIRQV           E+ ++ LL AEHHFSLFK KF
Sbjct: 4   LFLLSLLAFVLFSSAIAFSDEDPLIRQVVS---------ETDDSHLLNAEHHFSLFKSKF 54

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
            K YAS+EEHDHRF +FKANLRRA RHQ LDPSA HGIT+FSDLTP+EFRRTYLGL +  
Sbjct: 55  GKIYASEEEHDHRFKVFKANLRRARRHQLLDPSAEHGITKFSDLTPSEFRRTYLGLHKPK 114

Query: 128 RLPK-DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG 186
             PK +A++APILPT+DLPADFDWR+ GAV  VK+QGSCGSCWSFSTTGA+EGA+FLATG
Sbjct: 115 --PKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATG 172

Query: 187 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 246
           +LVSLSEQQLVDCDHECDPE+  +CD+GC GGLM +AFEYTLKAGGL  E+DYPYTG D 
Sbjct: 173 ELVSLSEQQLVDCDHECDPEQQDACDAGCGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG 232

Query: 247 GHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC 306
              C FDKSKIAA+V NFSV+ LDEDQIAANLVK+GPLAV INA +MQTY+GGVSCP IC
Sbjct: 233 --KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLIC 290

Query: 307 SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMV 366
            +R DHGVLLVGYGS G+APIRLKEK YWIIKNSWGE+WGE+GYYKICRG N+CGVD+MV
Sbjct: 291 FKRQDHGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMV 350

Query: 367 STVAAA 372
           STV AA
Sbjct: 351 STVTAA 356


>gi|164605519|dbj|BAF98585.1| CM0216.510.nc [Lotus japonicus]
          Length = 360

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 262/344 (76%), Positives = 292/344 (84%), Gaps = 15/344 (4%)

Query: 28  VDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKAN 87
           VD LIRQV DG             + LGAEHHF  FK++F K Y S+EEH +RF +FK+N
Sbjct: 26  VDPLIRQVVDG-------------EGLGAEHHFLEFKRRFGKVYVSEEEHGYRFNVFKSN 72

Query: 88  LRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD 147
           + RA RHQ LDPSA HG+T+FSDLTP EFR + LGLR  + LP DAD APIL T++LP D
Sbjct: 73  MHRARRHQLLDPSAVHGVTRFSDLTPMEFRHSVLGLR-GVGLPSDADSAPILRTDNLPKD 131

Query: 148 FDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEE 207
           FDWRE GAV PVK+QGSCG+CWSFS TGALEGA+FL+TGKLVSLSEQQLVDCDHECDPEE
Sbjct: 132 FDWREHGAVTPVKNQGSCGACWSFSATGALEGAHFLSTGKLVSLSEQQLVDCDHECDPEE 191

Query: 208 PGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVV 267
            GSCDSGC GGLMNSAFEY L  GG+MREEDYPY+GT  G  CKFD++KIAASVANFSVV
Sbjct: 192 AGSCDSGCKGGLMNSAFEYILNNGGVMREEDYPYSGT-AGGTCKFDQTKIAASVANFSVV 250

Query: 268 SLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPI 327
           S DEDQIAANLVKNGPLAVAINAVYMQTY+GGVSCPY+CS++L+HGVLLVGYGS  YAPI
Sbjct: 251 SRDEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYAPI 310

Query: 328 RLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           R+K+KPYWIIKNSWGE+WGENGYYKICRGRNVCGVDSMVSTVAA
Sbjct: 311 RMKQKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSMVSTVAA 354


>gi|27413319|gb|AAO11786.1| pre-pro cysteine proteinase [Vicia faba]
          Length = 363

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 258/368 (70%), Positives = 312/368 (84%), Gaps = 17/368 (4%)

Query: 9   FLVSLVVFSAVSSGTLIDDV---DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           F+ ++V+F+AV++ +  DD    D +IRQV D  ++           LL AEHHF+ FK 
Sbjct: 5   FIFAIVLFAAVATSS-TDDTNTDDFIIRQVVDNEED----------HLLNAEHHFTSFKS 53

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           KF+K+Y+++EEHD+RF +FK+NL +A  HQKLDP+A HGIT+FSDLT +EFRR +LGL++
Sbjct: 54  KFSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASEFRRQFLGLKK 113

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
           +LRLP  A +APILPT +LP DFDWREKGAV PVKDQGSCGSCW+FSTTGALEGA++LAT
Sbjct: 114 RLRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLAT 173

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           GKLVSLSEQQLVDCDH CDPE+ GSCDSGCNGGLMN+AFEY L++GG+++E+DY YTG D
Sbjct: 174 GKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD 233

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
              +CKFDKSK+ ASV+NFSVVSLDE+QIAANLVKNGPLAV INA +MQTY+ GVSCPY+
Sbjct: 234 --GSCKFDKSKVVASVSNFSVVSLDEEQIAANLVKNGPLAVGINAAWMQTYMSGVSCPYV 291

Query: 306 CSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDS 364
           C++ RLDHGVLLVG+G   YAPIRLKEKPYWI+KNSWG++WGE GYYKICRGRNVCGVDS
Sbjct: 292 CAKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIVKNSWGQNWGEQGYYKICRGRNVCGVDS 351

Query: 365 MVSTVAAA 372
           MVSTVAAA
Sbjct: 352 MVSTVAAA 359


>gi|113208365|dbj|BAF03553.1| cysteine proteinase CP2 [Phaseolus vulgaris]
          Length = 365

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/341 (76%), Positives = 290/341 (85%), Gaps = 11/341 (3%)

Query: 31  LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRR 90
           LIRQV   G+          + LL AEHHFS FK KF K YA++EEHDHRF +FK+N+RR
Sbjct: 30  LIRQVVPEGE--------VEDHLLNAEHHFSTFKAKFGKTYATKEEHDHRFGVFKSNMRR 81

Query: 91  AARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDW 150
           A  H +LDPSA HG+T+FSDLTPAEF R +LGL+  LRLP  A +APILPTN+LP DFDW
Sbjct: 82  ARLHAQLDPSAVHGVTKFSDLTPAEFHRKFLGLK-PLRLPAHAQKAPILPTNNLPKDFDW 140

Query: 151 REKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGS 210
           R+KGAV  VKDQGSCGSCWSFSTTGALEGA+FLATG+LVSLSEQQLVDCDH CDPEE GS
Sbjct: 141 RDKGAVTNVKDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGS 200

Query: 211 CDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLD 270
           CDSGCNGGLMN+AFEY + +GG+ RE+DYPYTG D    CKFDKSKIAASV+N+SV+SLD
Sbjct: 201 CDSGCNGGLMNNAFEYLIGSGGVQREKDYPYTGRDG--TCKFDKSKIAASVSNYSVISLD 258

Query: 271 EDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLK 330
           E+QIAANLVKNGPLAVAINAVYMQTY+GGVSCPYIC + LDHGVLLVGYG   YAPIR K
Sbjct: 259 EEQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFK 318

Query: 331 EKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           EKPYWIIKNSWGE+WGENGYYKICRGRNVCGVDSMVSTV A
Sbjct: 319 EKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSMVSTVGA 359


>gi|33945877|emb|CAE45588.1| papain-like cysteine proteinase-like protein 1 [Lotus japonicus]
          Length = 359

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 261/347 (75%), Positives = 296/347 (85%), Gaps = 16/347 (4%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D VD +I QV D             ++ LGAEHHF  FK++F K YA++EEH +RF +FK
Sbjct: 24  DGVDPMICQVVD-------------DEGLGAEHHFLEFKRRFGKVYATEEEHGYRFNVFK 70

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           +N+ RA RHQ LDPSA HG+TQFSDLTP EF+ + LGLR  + LP DAD APILPT++LP
Sbjct: 71  SNMHRARRHQLLDPSAVHGVTQFSDLTPMEFQHSVLGLR-GVGLPSDADSAPILPTDNLP 129

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE-CD 204
            DFDWRE GAV PVK+QGSCGSCWSFS TGALEGA+FL+TG+LVSLSEQQLVDCDH+ CD
Sbjct: 130 KDFDWREHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQQCD 189

Query: 205 PEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF 264
           PEE GSCDSGCNGGLMNSAFEY L  GG+MREEDYPY+GT+ G  CKFDK+KIAASVANF
Sbjct: 190 PEEAGSCDSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGG-TCKFDKAKIAASVANF 248

Query: 265 SVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGY 324
           SVVS DEDQIAANLVKNGPLAVAINAVYMQTY+GGVSCPY+CS++L+HGVLLVGYGS  Y
Sbjct: 249 SVVSRDEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESY 308

Query: 325 APIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           APIR+K+KPYWIIKNSWGE+WGENGYYKICRGRN+CGVDSMVSTVAA
Sbjct: 309 APIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAA 355


>gi|312985015|gb|ACX54787.2| cysteine protease [Arachis diogoi]
          Length = 360

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 257/348 (73%), Positives = 299/348 (85%), Gaps = 14/348 (4%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D  D LIRQVTDG      HH      +L AEHHF+ FK KF K+YA+QEEHD+RF +F+
Sbjct: 21  DQADPLIRQVTDG-----DHH------MLNAEHHFTTFKTKFGKSYATQEEHDYRFGVFR 69

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           ANLRRA  H KLDPSA HG+T+FSDLTP EF+R YLGL+  LRLP  A++APILPT+DLP
Sbjct: 70  ANLRRAKLHAKLDPSAEHGVTKFSDLTPEEFKRQYLGLK-PLRLPSTANKAPILPTSDLP 128

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            +FDWR+KGAV PVK+QGSCGSCW+FSTTGALEGA++L+TG+LVSLSEQQLVDCDH CDP
Sbjct: 129 ENFDWRDKGAVTPVKNQGSCGSCWAFSTTGALEGAHYLSTGELVSLSEQQLVDCDHVCDP 188

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
           EE G+CD+GCNGGLMN+AF+Y L+AGG+  E+DYPY+G D    CKFDKSK+AA+VANFS
Sbjct: 189 EEYGACDAGCNGGLMNNAFDYILQAGGVQTEKDYPYSGRDE--TCKFDKSKVAATVANFS 246

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           VVSLDEDQIAANLVK+GPLAV INA++MQTYIGGVSCPYIC + LDHGVLLVGYG+AGYA
Sbjct: 247 VVSLDEDQIAANLVKHGPLAVGINAIFMQTYIGGVSCPYICGKNLDHGVLLVGYGAAGYA 306

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAAV 373
           PIR K+KP+WIIKNSWGESWGE+GYYKICRG+NVCGVDSMVS+V A  
Sbjct: 307 PIRFKDKPFWIIKNSWGESWGEDGYYKICRGKNVCGVDSMVSSVVATT 354


>gi|1401242|gb|AAB67878.1| pre-pro-cysteine proteinase [Vicia faba]
          Length = 363

 Score =  548 bits (1411), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 256/367 (69%), Positives = 311/367 (84%), Gaps = 15/367 (4%)

Query: 9   FLVSLVVFSAVSSGTL--IDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKK 66
           F+ ++V+F+AV++ +    +  D +IRQV D  ++           LL AEHHF+ FK K
Sbjct: 5   FIFAIVLFAAVATSSTDNTNTDDFIIRQVVDNEED----------HLLNAEHHFTSFKSK 54

Query: 67  FNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRK 126
           F+K+Y+++EEHD+RF +FK+NL +A  HQKLDP+A HGIT+FSDLT +EFRR +LGL+++
Sbjct: 55  FSKSYSTKEEHDYRFGVFKSNLIKAKLHQKLDPTAEHGITKFSDLTASEFRRQFLGLKKR 114

Query: 127 LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG 186
           LRLP  A +APILPT +LP DFDWREKGAV PVKDQGSCGSCW+FSTTGALEGA++LATG
Sbjct: 115 LRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATG 174

Query: 187 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 246
           KLVSLSEQQLVDCDH CDPE+ GSCDSGCNGGLMN+AFEY L++GG+++E+DY YTG D 
Sbjct: 175 KLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD- 233

Query: 247 GHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC 306
             +CKFDKSK+ ASV+NFSVVSLDE+QIAANLVKNGPLAV INA +MQTY+ GVSCPY+C
Sbjct: 234 -GSCKFDKSKVVASVSNFSVVSLDEEQIAANLVKNGPLAVGINAAWMQTYMSGVSCPYVC 292

Query: 307 SR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
           ++ RLDHGVLLVG+G   YAPIRLKEKPYWI+KNSWG++WGE GYYKICRGRNVCGVDSM
Sbjct: 293 AKSRLDHGVLLVGFGKGAYAPIRLKEKPYWIVKNSWGQNWGEQGYYKICRGRNVCGVDSM 352

Query: 366 VSTVAAA 372
           VSTVAAA
Sbjct: 353 VSTVAAA 359


>gi|2511691|emb|CAB17075.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 365

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 264/346 (76%), Positives = 292/346 (84%), Gaps = 11/346 (3%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D  D LIRQV   G E+  H       LL AEHHFS FK KF K YA++EEHDHRF +FK
Sbjct: 25  DADDILIRQVVPEG-EVEDH-------LLNAEHHFSTFKSKFGKTYATKEEHDHRFGVFK 76

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           +N+RRA  H +LDPSA HG+T+FSDLTPAEF R +LGL+  LRLP  A +APILPTN+LP
Sbjct: 77  SNMRRARLHAQLDPSAVHGVTKFSDLTPAEFHRKFLGLK-PLRLPAHAQKAPILPTNNLP 135

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            DFDWR+KGAV  VKDQGSCGSCWSFSTTGALEGA+FLATG+LVSLSEQQLVDCDH CDP
Sbjct: 136 KDFDWRDKGAVTNVKDQGSCGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDP 195

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
           EE GSCDSGCNGGLMN+AFEY + +GG+ RE+DYPYTG D    CKFDKSKIAASV+N+S
Sbjct: 196 EEYGSCDSGCNGGLMNNAFEYLIGSGGVQREKDYPYTGRDG--TCKFDKSKIAASVSNYS 253

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           V+SLDE+QIAANLVKNGPLAVAINAVYMQTY+GGVSCPYIC + LDHGVLLVGYG   YA
Sbjct: 254 VISLDEEQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYA 313

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           PIR KEKPYWIIKNSWGE+WG NGYYKICRGRNVCGVDSMVSTV A
Sbjct: 314 PIRFKEKPYWIIKNSWGENWGGNGYYKICRGRNVCGVDSMVSTVGA 359


>gi|19195|emb|CAA78403.1| pre-pro-cysteine proteinase [Solanum lycopersicum]
          Length = 361

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 265/364 (72%), Positives = 297/364 (81%), Gaps = 12/364 (3%)

Query: 8   LFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKF 67
           LFL+S + F+  SS     D D LIRQV  G D+         N +L AEHHFSLFK KF
Sbjct: 2   LFLLSFLAFALFSSAIAFSDDDPLIRQVVSGNDD---------NHMLNAEHHFSLFKAKF 52

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
            K YASQEEHDHR  +FKANL RA RHQ LDPSA HGITQFSDLTP+EFRRTYLGL  K 
Sbjct: 53  GKIYASQEEHDHRLKVFKANLHRAKRHQLLDPSAEHGITQFSDLTPSEFRRTYLGLN-KP 111

Query: 128 RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
           R   +A++APILPT DLP+DFDWREKGAV  VK+QGSCGSCWSFSTTGA+EGA+FLATG+
Sbjct: 112 RPNLNAEKAPILPTKDLPSDFDWREKGAVTDVKNQGSCGSCWSFSTTGAVEGAHFLATGE 171

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           LVSLSEQQLVDCDHECDP E   CD+GCNGGLM +AFEYTLKAGGL  E+DYPYTG  R 
Sbjct: 172 LVSLSEQQLVDCDHECDPVEKNDCDAGCNGGLMTTAFEYTLKAGGLQLEKDYPYTG--RN 229

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICS 307
             C FDKS+IAASV+NFSVV LDEDQIAANL+K+GPLAV INA +MQTY+ GVSCP IC 
Sbjct: 230 GKCHFDKSRIAASVSNFSVVGLDEDQIAANLLKHGPLAVGINAAWMQTYVRGVSCPLICF 289

Query: 308 RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
           +R DHGVLLVGYGS G+APIRLK KPYWIIKNSWG++WGE+GYYKICRG ++CGVD+MVS
Sbjct: 290 KRQDHGVLLVGYGSEGFAPIRLKNKPYWIIKNSWGKTWGEHGYYKICRGHHICGVDAMVS 349

Query: 368 TVAA 371
           TV A
Sbjct: 350 TVTA 353


>gi|359492709|ref|XP_002280798.2| PREDICTED: cysteine proteinase RD19a-like [Vitis vinifera]
 gi|147841854|emb|CAN73591.1| hypothetical protein VITISV_022889 [Vitis vinifera]
 gi|302142582|emb|CBI19785.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 264/343 (76%), Positives = 286/343 (83%), Gaps = 13/343 (3%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D LI QV   GD           DLL AE+ F+ FK KF K YA+ EEHDHRF +FKANL
Sbjct: 36  DLLIHQVVSDGD-----------DLLNAEYQFAEFKTKFGKTYATAEEHDHRFNVFKANL 84

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
           RRA RHQ LDPSA HG+TQFSDLTP EFR+ YLGL+R L+LP DA +APILPT DLP DF
Sbjct: 85  RRAKRHQLLDPSAEHGVTQFSDLTPREFRQNYLGLKR-LQLPADAQKAPILPTKDLPTDF 143

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWR+ GAV  VKDQG CGSCWSFST GALEGA+FLATG LVSLS QQL+DCD ECDPEE 
Sbjct: 144 DWRDHGAVTAVKDQGYCGSCWSFSTIGALEGAHFLATGNLVSLSTQQLLDCDTECDPEEY 203

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
            +CD GCNGGLMN+AFEY LKAGG+ +EEDYPYTGTDRG  C+F+K+KIAASVANFSVVS
Sbjct: 204 DACDDGCNGGLMNNAFEYILKAGGVAQEEDYPYTGTDRG-LCRFNKTKIAASVANFSVVS 262

Query: 269 LDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIR 328
           LDEDQIAANLVKNGPLAV INAV+MQTY  GVSCPYICS  LDHGVLLVGYGSAGY+PIR
Sbjct: 263 LDEDQIAANLVKNGPLAVGINAVFMQTYKSGVSCPYICSSTLDHGVLLVGYGSAGYSPIR 322

Query: 329 LKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
            KEKPYWIIKNSWGESWGE GYYKICRG N+CGVDSMVSTVAA
Sbjct: 323 FKEKPYWIIKNSWGESWGEQGYYKICRGHNICGVDSMVSTVAA 365


>gi|7242888|dbj|BAA92495.1| cysteine protease [Vigna mungo]
          Length = 364

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 263/341 (77%), Positives = 292/341 (85%), Gaps = 11/341 (3%)

Query: 31  LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRR 90
           LIRQV   G E+  H       LL AEHHFS FK KF K YA++EEHDHRF +FK+NLRR
Sbjct: 29  LIRQVVPEG-EVEDH-------LLNAEHHFSNFKAKFGKTYATKEEHDHRFGVFKSNLRR 80

Query: 91  AARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDW 150
           A  H +LDPSA HG+T+FSDLT AEF+R +LGL+  L LP +A +APILPTN+LP DFDW
Sbjct: 81  ARLHAQLDPSAVHGVTKFSDLTAAEFQRQFLGLK-PLGLPANAQKAPILPTNNLPKDFDW 139

Query: 151 REKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGS 210
           R+KGAV  VKDQG+CGSCWSFSTTGALEGA+FLATG+LVSLSEQQLVDCDH CDPEE G+
Sbjct: 140 RDKGAVTNVKDQGACGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHVCDPEEYGA 199

Query: 211 CDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLD 270
           CDSGCNGGLMN+AFEY L AGG+ REEDYPY G D   +CKFDKSKIAASVAN+SV+SLD
Sbjct: 200 CDSGCNGGLMNNAFEYILGAGGVQREEDYPYAGRDS--SCKFDKSKIAASVANYSVISLD 257

Query: 271 EDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLK 330
           EDQIAANLVKNGPLAV INAVYMQTYIGGVSCPYIC++RLDHGV +VGYG +GYAPIR K
Sbjct: 258 EDQIAANLVKNGPLAVGINAVYMQTYIGGVSCPYICAKRLDHGVQIVGYGESGYAPIRFK 317

Query: 331 EKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           EKPYWIIKNSWGESWGENGYYKICRG+N CGVDSMVSTV A
Sbjct: 318 EKPYWIIKNSWGESWGENGYYKICRGQNACGVDSMVSTVGA 358


>gi|28192375|gb|AAK07731.1| CPR2-like cysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  546 bits (1408), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/366 (72%), Positives = 301/366 (82%), Gaps = 14/366 (3%)

Query: 8   LFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKF 67
           LFL+SL+ F   SS     D D LIRQV           E+ ++ LL AEHHFSLFK KF
Sbjct: 4   LFLLSLLAFVLFSSAIAFSDEDPLIRQVVS---------ETDDSHLLNAEHHFSLFKSKF 54

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
            K YAS+EEHDHRF +FKAN RRA RHQ LDPSA HGIT+FSDLTP+EFRRTYLGL +  
Sbjct: 55  GKIYASEEEHDHRFKVFKANRRRARRHQLLDPSAEHGITKFSDLTPSEFRRTYLGLHKPK 114

Query: 128 RLPK-DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG 186
             PK +A++APILPT+DLPADFDWR+ GAV  VK+QGSCGSCWSFSTTGA+EGA+FLATG
Sbjct: 115 --PKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATG 172

Query: 187 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 246
           +LVSLSEQQLVDCDHECDPE+  +CD+GC GGLM +AFEYTLKAGGL  E+DYPYTG D 
Sbjct: 173 ELVSLSEQQLVDCDHECDPEQQDACDAGCGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG 232

Query: 247 GHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC 306
              C FDKSKIAA+V NFSV+ LDEDQIAANLVK+GPLAV INA +MQTY+GGVSCP IC
Sbjct: 233 --KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLIC 290

Query: 307 SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMV 366
            +R DHGVLLVGYGS G+APIRLKEK YWIIKNSWGE+WGE+GYYKICRG N+CGVD+MV
Sbjct: 291 FKRQDHGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMV 350

Query: 367 STVAAA 372
           STV AA
Sbjct: 351 STVTAA 356


>gi|33945878|emb|CAE45589.1| papain-like cysteine proteinase-like protein 2 [Lotus japonicus]
          Length = 361

 Score =  546 bits (1407), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 262/347 (75%), Positives = 294/347 (84%), Gaps = 16/347 (4%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D VD +I QV D             ++ LGAEHHF  FK++F K YA++EEH +RF +FK
Sbjct: 24  DGVDPMICQVVD-------------DEGLGAEHHFLEFKRRFGKVYATEEEHGYRFNVFK 70

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           +N+ RA RHQ LDPSA HG+T+FSDLTP EFR + LGLR  + LP DAD APILPT++LP
Sbjct: 71  SNMHRARRHQLLDPSAVHGVTRFSDLTPMEFRHSVLGLR-GVGLPSDADSAPILPTDNLP 129

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE-CD 204
            DFDWRE GAV PVK+QGSCGSCWSFS TGALEGA+FL+TGKLVSLSEQQLVDCDHE CD
Sbjct: 130 KDFDWREHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGKLVSLSEQQLVDCDHEQCD 189

Query: 205 PEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF 264
           PEE GSCDSGC GGLMNSAFEY L  GG+MREEDYPY+GT  G  CKFD++KIAASVANF
Sbjct: 190 PEEAGSCDSGCKGGLMNSAFEYILNNGGVMREEDYPYSGT-AGGTCKFDQTKIAASVANF 248

Query: 265 SVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGY 324
           SVVS DEDQIAANLVKNGPLAVAINAVYMQTY+GGVSCPY+CS++L+HGVLLVGYGS  Y
Sbjct: 249 SVVSRDEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESY 308

Query: 325 APIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           APIR+K+KPYWIIKNSWGE+WGENGYYKICRGRNVCGVDSMVSTVAA
Sbjct: 309 APIRMKQKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSMVSTVAA 355


>gi|171854651|dbj|BAG16515.1| putative cysteine proteinase [Capsicum chinense]
          Length = 367

 Score =  546 bits (1406), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 269/368 (73%), Positives = 300/368 (81%), Gaps = 14/368 (3%)

Query: 8   LFLVSLVVFSAVSSGTL-IDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKK 66
           LFL+SL+VF+  SS      D D LIRQVT   D+        NN LL AEHHFSLFK K
Sbjct: 4   LFLLSLLVFTIFSSSAFAFSDEDPLIRQVTSESDD-------NNNHLLNAEHHFSLFKSK 56

Query: 67  FNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRK 126
           F K YA+QEEHDHR  +FKANLRRA RHQ LDP+A HGIT+FSDLTP+EFRRTYLGL + 
Sbjct: 57  FGKIYATQEEHDHRLKVFKANLRRARRHQLLDPTAEHGITKFSDLTPSEFRRTYLGLHKP 116

Query: 127 LRLPK-DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
              PK    +APILPT+DLP DFDWREKGAV  VK+QGSCGSCWSFSTTGA+EGA+FLAT
Sbjct: 117 K--PKLSTTKAPILPTSDLPEDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLAT 174

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           G+LVSLSEQQLVDCDHECD E+   CD+GC GGLM +AFEYTLKAGGL RE+DYPYTG  
Sbjct: 175 GELVSLSEQQLVDCDHECDAEQKSECDAGCGGGLMTTAFEYTLKAGGLQREKDYPYTG-- 232

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
           R   C FDKSKIAASV N+SVV LDEDQIAANLVK+GPLAV IN+ +MQTYIGGVSCP +
Sbjct: 233 RNGQCHFDKSKIAASVTNYSVVGLDEDQIAANLVKHGPLAVGINSAWMQTYIGGVSCPLV 292

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NVCGVDS 364
           C +  DHGVLLVGYGSAG+APIRLK KPYWIIKNSWGE WGE+GYYKICRG+ N+CGVD+
Sbjct: 293 CFKHQDHGVLLVGYGSAGFAPIRLKAKPYWIIKNSWGEHWGEHGYYKICRGQHNICGVDA 352

Query: 365 MVSTVAAA 372
           MVSTV AA
Sbjct: 353 MVSTVTAA 360


>gi|356553413|ref|XP_003545051.1| PREDICTED: cysteine proteinase 15A-like [Glycine max]
          Length = 367

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 258/343 (75%), Positives = 291/343 (84%), Gaps = 5/343 (1%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D LIRQV    D +    E   + LL AEHHF+ FK KF K YA++EEHD RF +FK+NL
Sbjct: 24  DILIRQVVP--DAVGEAAEKEEDHLLNAEHHFASFKAKFGKKYATKEEHDRRFGVFKSNL 81

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
           RRA  H KLDPSA HG+T+FSDLTPAEFRR +LG +  LRLP +A +APILPT DLP DF
Sbjct: 82  RRARLHAKLDPSAVHGVTKFSDLTPAEFRRQFLGFK-PLRLPANAQKAPILPTKDLPKDF 140

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWR+KGAV  VKDQG+CGSCWSFSTTGALEGA++LATG+LVSLSEQQLVDCDH CDPEE 
Sbjct: 141 DWRDKGAVTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEY 200

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
           G+CDSGCNGGLMN+AFEY L++GG+ +E+DYPYTG D    CKFDK+K+AA+V+N+SVVS
Sbjct: 201 GACDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDG--TCKFDKTKVAATVSNYSVVS 258

Query: 269 LDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIR 328
           LDEDQIAANLVKNGPLAV INAV+MQTYIGGVSCPYIC + LDHGVL+VGYG   YAPIR
Sbjct: 259 LDEDQIAANLVKNGPLAVGINAVFMQTYIGGVSCPYICGKHLDHGVLIVGYGEGAYAPIR 318

Query: 329 LKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
            K KPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA
Sbjct: 319 FKNKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 361


>gi|4757570|gb|AAD29084.1|AF082181_1 cysteine proteinase precursor [Solanum melongena]
          Length = 363

 Score =  543 bits (1399), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 263/345 (76%), Positives = 290/345 (84%), Gaps = 12/345 (3%)

Query: 27  DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKA 86
           D D LIRQV           E+ +N +L AEHHFSLFK K+ K YASQEEHDHR  +FKA
Sbjct: 23  DDDPLIRQVVS---------ETDDNHMLNAEHHFSLFKSKYGKIYASQEEHDHRLKVFKA 73

Query: 87  NLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPA 146
           NLRRA RHQ LDP+A HGITQFSDLTP+EFRRTYLGL  K R   +A +APILPT+DLP 
Sbjct: 74  NLRRARRHQLLDPTAEHGITQFSDLTPSEFRRTYLGLH-KPRPKLNAQKAPILPTSDLPE 132

Query: 147 DFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPE 206
           DFDWREKGAV  VK+QGSCGSCWSFSTTGA+EGA+FLATG+LVSLSEQQLVDCDHECD E
Sbjct: 133 DFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHECDAE 192

Query: 207 EPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV 266
           E   CD+GCNGGLM +AFEYTLKAGGL RE+DYPYTG D    C FDKSKIAASVANFSV
Sbjct: 193 EKSECDAGCNGGLMTTAFEYTLKAGGLQREKDYPYTGRDG--KCHFDKSKIAASVANFSV 250

Query: 267 VSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAP 326
           + LDEDQIAANLVK+GPLAV INA +MQTY+ GVSCP IC +R DHGVLLVGYGSAG+AP
Sbjct: 251 IGLDEDQIAANLVKHGPLAVGINAAWMQTYMRGVSCPLICFKRQDHGVLLVGYGSAGFAP 310

Query: 327 IRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           IRLKEKPYWIIKNSWGE+WGE+GYYKICRG N+CGVD+MVSTV A
Sbjct: 311 IRLKEKPYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTVTA 355


>gi|224082940|ref|XP_002306900.1| predicted protein [Populus trichocarpa]
 gi|118481986|gb|ABK92924.1| unknown [Populus trichocarpa]
 gi|222856349|gb|EEE93896.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 265/343 (77%), Positives = 300/343 (87%), Gaps = 11/343 (3%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D LIRQV   G++           LL AEHHF+ FK KF K YA+QEEHD+RF++FKANL
Sbjct: 30  DPLIRQVVSEGED----------HLLNAEHHFTTFKSKFGKNYATQEEHDYRFSVFKANL 79

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
            RA +HQ +DP+A HG+T+FSDLTP EFRR  LGL+R+LRLP DA++APILPT DLP DF
Sbjct: 80  LRAKKHQIMDPTAAHGVTKFSDLTPKEFRRQLLGLKRRLRLPTDANKAPILPTGDLPTDF 139

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWR+ GAV  VKDQGSCGSCWSFS TGALEGA++LATG+LVSLSEQQLVDCDHECDPEE 
Sbjct: 140 DWRDHGAVTSVKDQGSCGSCWSFSATGALEGAHYLATGELVSLSEQQLVDCDHECDPEEY 199

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
           G+CDSGC+GGLMN+AFEY LKAGGL RE+DYPYTG DRG ACKF+KSK+AASV+NFSVVS
Sbjct: 200 GACDSGCSGGLMNNAFEYALKAGGLEREKDYPYTGNDRG-ACKFEKSKVAASVSNFSVVS 258

Query: 269 LDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIR 328
           LDEDQIAANLVK+GPL+VAINAV+MQTYIGGVSCPYICS+  DHGVLLVGYG+AGYAPIR
Sbjct: 259 LDEDQIAANLVKHGPLSVAINAVFMQTYIGGVSCPYICSKHQDHGVLLVGYGAAGYAPIR 318

Query: 329 LKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
            KEKP+WIIKNSWGE+WGENGYYKICR RN+CGVDSMVSTVAA
Sbjct: 319 FKEKPFWIIKNSWGENWGENGYYKICRARNICGVDSMVSTVAA 361


>gi|457756|emb|CAA82995.1| cysteine proteinase [Vicia sativa]
          Length = 358

 Score =  543 bits (1398), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 256/345 (74%), Positives = 296/345 (85%), Gaps = 13/345 (3%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D LIRQV D          +  + LL AEHHF+ FK KF+K+YA++EEHD+RF +FKANL
Sbjct: 22  DFLIRQVVD----------NEEDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKANL 71

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
            +A  HQKLDP+A HGIT+FSDLT +EFRR +LGL ++LRLP  A +APILPT +LP DF
Sbjct: 72  IKAKLHQKLDPTAEHGITKFSDLTASEFRRQFLGLNKRLRLPAHAQKAPILPTTNLPEDF 131

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWREKGAV PVKDQGSCGSCW+FSTTGALEGA++LATGKLVSLSEQQLVDCDH CDPEE 
Sbjct: 132 DWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEEA 191

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
           GSCDSGCNGGLMN+AFEY L++GG+++E+DY YTG D   +CKFDKSK+ ASV+NFSVVS
Sbjct: 192 GSCDSGCNGGLMNNAFEYLLQSGGVVQEKDYAYTGRD--GSCKFDKSKVVASVSNFSVVS 249

Query: 269 LDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPI 327
           LDE+QIAANLVKNGPLAVAINA +MQ Y+ GVSCPY+C++ RLDHGVLLVG+G   YAPI
Sbjct: 250 LDEEQIAANLVKNGPLAVAINAAWMQAYMSGVSCPYVCAKARLDHGVLLVGFGKGAYAPI 309

Query: 328 RLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           RLKEKPYWIIKNSWG++WGE GYYKICRGRNVCGVDSMVSTVAAA
Sbjct: 310 RLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVSTVAAA 354


>gi|356564325|ref|XP_003550405.1| PREDICTED: cysteine proteinase 15A [Glycine max]
          Length = 370

 Score =  542 bits (1397), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 257/341 (75%), Positives = 290/341 (85%), Gaps = 8/341 (2%)

Query: 31  LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRR 90
           LIRQV     E         ++LL AEHHF+ FK KF K YA++EEHDHRF +FK+NLRR
Sbjct: 32  LIRQVVPDVGEA-----EEEDNLLNAEHHFASFKAKFAKTYATKEEHDHRFGVFKSNLRR 86

Query: 91  AARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDW 150
           A  H KLDPSA HG+T+FSDLTPAEFRR +LGL+  LR P  A +APILPT DLP DFDW
Sbjct: 87  ARLHAKLDPSAVHGVTKFSDLTPAEFRRQFLGLK-PLRFPAHAQKAPILPTKDLPKDFDW 145

Query: 151 REKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGS 210
           R+KGAV  VKDQG+CGSCWSFSTTGALEGA++LATG+LVSLSEQQLVDCDH CDPEE G+
Sbjct: 146 RDKGAVTNVKDQGACGSCWSFSTTGALEGAHYLATGELVSLSEQQLVDCDHVCDPEEYGA 205

Query: 211 CDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLD 270
           CDSGCNGGLMN+AFEY L++GG+ +E+DYPYTG D    CKFDK+K+AA+V+N+SVVSLD
Sbjct: 206 CDSGCNGGLMNNAFEYILQSGGVQKEKDYPYTGRDG--TCKFDKTKVAATVSNYSVVSLD 263

Query: 271 EDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLK 330
           E+QIAANLVKNGPLAVAINAV+MQTY+GGVSCPYIC + LDHGVLLVGYG   YAPIR K
Sbjct: 264 EEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFK 323

Query: 331 EKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
            KPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA
Sbjct: 324 NKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 364


>gi|118150|sp|P25804.1|CYSP_PEA RecName: Full=Cysteine proteinase 15A; AltName:
           Full=Turgor-responsive protein 15A; Flags: Precursor
 gi|20679|emb|CAA38242.1| unnamed protein product [Pisum sativum]
          Length = 363

 Score =  541 bits (1394), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 257/359 (71%), Positives = 303/359 (84%), Gaps = 15/359 (4%)

Query: 15  VFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQ 74
           V +AV+  T  DD   +IRQV D  ++           LL AEHHF+ FK KF+K+YA++
Sbjct: 15  VATAVTDDTNNDDF--IIRQVVDNEED----------HLLNAEHHFTSFKSKFSKSYATK 62

Query: 75  EEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDAD 134
           EEHD+RF +FK+NL +A  HQ  DP+A HGIT+FSDLT +EFRR +LGL+++LRLP  A 
Sbjct: 63  EEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQ 122

Query: 135 QAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQ 194
           +APILPT +LP DFDWREKGAV PVKDQGSCGSCW+FSTTGALEGA++LATGKLVSLSEQ
Sbjct: 123 KAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQ 182

Query: 195 QLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDK 254
           QLVDCDH CDPE+ GSCDSGCNGGLMN+AFEY L++GG+++E+DY YTG D   +CKFDK
Sbjct: 183 QLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD--GSCKFDK 240

Query: 255 SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR-RLDHG 313
           SK+ ASV+NFSVV+LDEDQIAANLVKNGPLAVAINA +MQTY+ GVSCPY+C++ RLDHG
Sbjct: 241 SKVVASVSNFSVVTLDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYVCAKSRLDHG 300

Query: 314 VLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           VLLVG+G   YAPIRLKEKPYWIIKNSWG++WGE GYYKICRGRNVCGVDSMVSTVAAA
Sbjct: 301 VLLVGFGKGAYAPIRLKEKPYWIIKNSWGQNWGEQGYYKICRGRNVCGVDSMVSTVAAA 359


>gi|205364757|gb|ACI04578.1| cysteine protease-like protein [Robinia pseudoacacia]
          Length = 335

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 258/343 (75%), Positives = 296/343 (86%), Gaps = 14/343 (4%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D LIRQV D  ++           +L AEHHFS FK KF+K YA++EEHD+RF +FK+N+
Sbjct: 1   DLLIRQVVDDNED----------HVLNAEHHFSTFKSKFSKTYATKEEHDYRFGVFKSNV 50

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
           RRA  H KLDPSA HG+T+FSDLTP+EFRR +LGL+  LRLP+ A +APILPT+DLP DF
Sbjct: 51  RRAKLHAKLDPSAVHGVTKFSDLTPSEFRRQFLGLK-PLRLPEHAQKAPILPTHDLPEDF 109

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWR+KGAV  VK+QGSCGSCW+FSTTGALEG++FLATG+LVSLS+QQLVDCDH CDPE+ 
Sbjct: 110 DWRDKGAVTHVKNQGSCGSCWAFSTTGALEGSHFLATGELVSLSDQQLVDCDHVCDPEQY 169

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
           G+CDSGCNGGLMN+AFEY L++GG+ REEDYPYTG DRG A   D++  AASV+NFSVVS
Sbjct: 170 GACDSGCNGGLMNNAFEYILESGGVQREEDYPYTGRDRGPA--IDEAN-AASVSNFSVVS 226

Query: 269 LDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIR 328
           LDEDQI+ANLVKNGPLA+ INAV+MQTYIGGVSCPYIC + LDHGVLLVGYG AGYAPIR
Sbjct: 227 LDEDQISANLVKNGPLAIGINAVFMQTYIGGVSCPYICGKNLDHGVLLVGYGKAGYAPIR 286

Query: 329 LKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           LKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA
Sbjct: 287 LKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 329


>gi|449469923|ref|XP_004152668.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
 gi|449520697|ref|XP_004167370.1| PREDICTED: cysteine proteinase RD19a-like [Cucumis sativus]
          Length = 371

 Score =  539 bits (1389), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 262/370 (70%), Positives = 300/370 (81%), Gaps = 18/370 (4%)

Query: 3   SKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSL 62
           S TV   + S  + SAVS     D+ D LIRQV  G D+            L AE HF  
Sbjct: 16  SATVAYGVSSDQINSAVS-----DEEDILIRQVVSGADD----------RPLTAEQHFQD 60

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLG 122
           FK KF K Y + EEHD+RF +FKANLR+A RHQKLDP A HG+T+FSDLT +EFR  ++G
Sbjct: 61  FKLKFGKTYTTDEEHDYRFRVFKANLRKAKRHQKLDPDAVHGVTRFSDLTESEFRENFVG 120

Query: 123 LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
           L R LRLP DA QAPILPT++L +DFDWR++GAV PVKDQGSCGSCWSFS  GALEGANF
Sbjct: 121 LNR-LRLPADAHQAPILPTDNLASDFDWRDQGAVTPVKDQGSCGSCWSFSAVGALEGANF 179

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
           L+TGKL+SLSEQQLVDCDHECDPEE G+CD+GCNGGLM SAFEY +KAGGL REEDYPYT
Sbjct: 180 LSTGKLISLSEQQLVDCDHECDPEEAGACDAGCNGGLMTSAFEYIVKAGGLEREEDYPYT 239

Query: 243 GTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSC 302
           GTDRG +CKF   KIAAS ANFSV+S D DQIAANLVKNGPLA+ INAV+MQTY+ G+SC
Sbjct: 240 GTDRG-SCKFQNGKIAASAANFSVISNDADQIAANLVKNGPLAIGINAVFMQTYMKGISC 298

Query: 303 PYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 361
           PYICS+R LDHGVLLVGYG+AG+APIRLKEKPYWIIKNSWGE+WGENGYY IC+G+N+CG
Sbjct: 299 PYICSKRNLDHGVLLVGYGAAGFAPIRLKEKPYWIIKNSWGENWGENGYYFICKGKNICG 358

Query: 362 VDSMVSTVAA 371
            +SMVS+VAA
Sbjct: 359 SESMVSSVAA 368


>gi|19851|emb|CAA78365.1| tobacco pre-pro-cysteine proteinase [Nicotiana tabacum]
          Length = 365

 Score =  539 bits (1388), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 265/366 (72%), Positives = 302/366 (82%), Gaps = 12/366 (3%)

Query: 8   LFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKF 67
           LFL+SL  F+  SS     D D LIRQV       +S  E+ ++ LL AEHHFSLFK KF
Sbjct: 4   LFLLSLPRFALFSSAIAFPDEDPLIRQV-------VSETETDDSHLLNAEHHFSLFKSKF 56

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
            K YAS+EEHDHRF +FKANLRRA  +Q LDPSA HGIT+FSDLTP+EFRRTYLGL +  
Sbjct: 57  GKIYASEEEHDHRFKVFKANLRRARLNQLLDPSAEHGITKFSDLTPSEFRRTYLGLHKPK 116

Query: 128 RLPK-DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG 186
             PK +A++APILPT+DLPAD+DWR+ GAV  VK+QGSCGSCWSFSTTGA+EGA+FLATG
Sbjct: 117 --PKVNAEKAPILPTSDLPADYDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATG 174

Query: 187 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 246
           +LVSLSEQQLVDCDHECD E+  SCD+GC GGLM +AFEYTLKAGGL  E+DYPYTG D 
Sbjct: 175 ELVSLSEQQLVDCDHECDSEQQDSCDAGCGGGLMTTAFEYTLKAGGLQLEKDYPYTGKDG 234

Query: 247 GHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC 306
              C FDKSKIAA+V NFSV+ LDEDQIAANLVK+GPLAV INA +MQTY+GGVSCP IC
Sbjct: 235 --KCHFDKSKIAAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLIC 292

Query: 307 SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMV 366
            +R DHGVLLVGYGS G+APIRLKEK YWIIKNSWGE+WGE+GYYKICRG N+CGVD+MV
Sbjct: 293 FKRQDHGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMV 352

Query: 367 STVAAA 372
           STV AA
Sbjct: 353 STVTAA 358


>gi|218137972|gb|ACK57563.1| cysteine protease-like protein [Arachis hypogaea]
          Length = 364

 Score =  537 bits (1384), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 260/346 (75%), Positives = 292/346 (84%), Gaps = 12/346 (3%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           DD + LIRQV + GDE           LL AEHHFS FK KF+K YA++EEHD+RF +FK
Sbjct: 25  DDDNILIRQVVEDGDE----------HLLNAEHHFSAFKTKFSKTYATKEEHDYRFGVFK 74

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           +NL RA  HQ+LDPSA HG+T+FSDLTP+EFR  +LGL+  L LP DA  APILPT++LP
Sbjct: 75  SNLLRAKSHQELDPSAIHGVTKFSDLTPSEFRSQFLGLK-PLSLPSDAHNAPILPTDNLP 133

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            DFDWR+ GAV  VK+QG+ GSCWSFSTTGALEGA+FLATG+LVSLSEQQLVDCDHECDP
Sbjct: 134 KDFDWRDHGAVTNVKNQGTGGSCWSFSTTGALEGAHFLATGELVSLSEQQLVDCDHECDP 193

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
           +   +CDSGCNGGLM +AF YT KAGGL+REEDY YTG DRG  CKFDKSKIAASV+NFS
Sbjct: 194 DLNDACDSGCNGGLMTTAFGYTKKAGGLVREEDYLYTGRDRG-PCKFDKSKIAASVSNFS 252

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           VVSLDEDQIAANLVKNGPL+V INAVYMQTYIGGVSCP+IC + LDHGVLLVGYG+ GYA
Sbjct: 253 VVSLDEDQIAANLVKNGPLSVGINAVYMQTYIGGVSCPFICGKHLDHGVLLVGYGAGGYA 312

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           PIR KEKPYWIIKNSWGE+WGENGYYKICRG N+CGVDSMVSTV A
Sbjct: 313 PIRFKEKPYWIIKNSWGENWGENGYYKICRGPNMCGVDSMVSTVIA 358


>gi|42407296|dbj|BAD10859.1| cysteine protease [Aster tripolium]
          Length = 363

 Score =  537 bits (1383), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 253/347 (72%), Positives = 291/347 (83%), Gaps = 8/347 (2%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D  D LIRQV    DE     E  ++ LL  EHHF LFK KF + Y ++EEH++R T+FK
Sbjct: 21  DSSDPLIRQVVQN-DET----EIESDPLLDPEHHFKLFKNKFGRTYDTEEEHEYRLTVFK 75

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           +NLRRA RHQ LDP+A HG+T+FSDLTP+EFR+ YLGL+ KL+LP DA++APILPT++LP
Sbjct: 76  SNLRRAKRHQVLDPTAKHGVTKFSDLTPSEFRKKYLGLKSKLKLPADANKAPILPTSNLP 135

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            DFDWR+KGAV PVK+QGSCGSCWSFSTTGALEG++FL TG+LVSLSEQQLVDCDHECDP
Sbjct: 136 QDFDWRDKGAVTPVKNQGSCGSCWSFSTTGALEGSHFLQTGELVSLSEQQLVDCDHECDP 195

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
            E  SCDSGCNGGLMN+AFEY LKAGGL +E DYPYTG  R   CKFDKSKIAASVANFS
Sbjct: 196 AEYNSCDSGCNGGLMNNAFEYILKAGGLQKEADYPYTG--RDGTCKFDKSKIAASVANFS 253

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGY 324
           VVS DEDQIAANLV NGPLA+ INA +MQTYIG VSCPYICS+ ++DHGVLLVGYGSAGY
Sbjct: 254 VVSTDEDQIAANLVTNGPLAIGINAAWMQTYIGQVSCPYICSKTKMDHGVLLVGYGSAGY 313

Query: 325 APIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           AP+R KEKPYWIIKNSWGE WGE+GYYK+C G N CG+D+MVS V +
Sbjct: 314 APLRFKEKPYWIIKNSWGEDWGEDGYYKLCSGYNACGMDTMVSAVVS 360


>gi|3377952|emb|CAA08906.1| cysteine proteinase [Cicer arietinum]
          Length = 362

 Score =  536 bits (1382), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 269/365 (73%), Positives = 319/365 (87%), Gaps = 15/365 (4%)

Query: 9   FLVSLVVFSAVSSGTLIDDVDQ-LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKF 67
           FL++L++FS V++ T  D+ D  LIRQVTD        HE  ++ LL AEHHF+ FK KF
Sbjct: 5   FLLALLLFSVVATATKDDNNDDFLIRQVTD--------HE--DDQLLNAEHHFTTFKSKF 54

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
           +K+YA++EEHD+RF +FK+NL++A  HQKLDPSA HG+T+FSDLT +EFRR +LGL+++L
Sbjct: 55  SKSYATKEEHDYRFGVFKSNLKKAKLHQKLDPSAEHGVTKFSDLTASEFRRQFLGLKKRL 114

Query: 128 RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
           RLP  A +APILPTN+LP DFDWREKGAV PVKDQGSCGSCW+FSTTGALEGAN+LATGK
Sbjct: 115 RLPAHAQKAPILPTNNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGANYLATGK 174

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           LVSLSEQQLVDCDH CDP+E  SCDSGCNGGLMN+AFEY L++GG++RE+DY YTG D  
Sbjct: 175 LVSLSEQQLVDCDHVCDPDEYNSCDSGCNGGLMNNAFEYLLQSGGVVREQDYSYTGRD-- 232

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICS 307
            +CKFDKSKIAASV+NFSVVS+DEDQIAANLVKNGPLAVAINA +MQTY+ GVSCPYIC+
Sbjct: 233 GSCKFDKSKIAASVSNFSVVSVDEDQIAANLVKNGPLAVAINAAWMQTYMSGVSCPYICA 292

Query: 308 R-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMV 366
           + RLDHGVLLVG+G+ G+APIRLKEKPYWIIKNSWG++WGE GYYKICRGRN+CGVDSMV
Sbjct: 293 KSRLDHGVLLVGFGN-GFAPIRLKEKPYWIIKNSWGQNWGEEGYYKICRGRNICGVDSMV 351

Query: 367 STVAA 371
           STVAA
Sbjct: 352 STVAA 356


>gi|15705865|gb|AAL05851.1|AF411121_1 cysteine proteinase precursor [Sandersonia aurantiaca]
          Length = 360

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 249/343 (72%), Positives = 286/343 (83%), Gaps = 11/343 (3%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D +IRQV     +           LL AE HFS F  ++ K+YA + EH +RF++FK+NL
Sbjct: 24  DPVIRQVVSDDQQ----------QLLSAEAHFSSFLSRYGKSYADEAEHAYRFSVFKSNL 73

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
           RRA RHQ+LDP+A HG+T+F+DLTP+EFRRTYLGLRR+ R       APILPTN+LPADF
Sbjct: 74  RRARRHQRLDPTAVHGVTRFADLTPSEFRRTYLGLRRRPRTAGSTHDAPILPTNELPADF 133

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWR+ GAV PVK+QGSCGSCWSFS  GALEGAN+L+TG LVSLSEQQLVDCDHECD  EP
Sbjct: 134 DWRDHGAVTPVKNQGSCGSCWSFSAAGALEGANYLSTGNLVSLSEQQLVDCDHECDSSEP 193

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
            SCD GCNGGLM +AFEY LK+GGL RE DYPYTGTDRG  CKF+K+KI+A  +NFSVVS
Sbjct: 194 DSCDQGCNGGLMTTAFEYILKSGGLEREADYPYTGTDRG-TCKFNKAKISAVASNFSVVS 252

Query: 269 LDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIR 328
           +DEDQIAANLVK+GPLAV INAV+MQTY+GGVSCPYIC + LDHGVLLVGYGSAG+APIR
Sbjct: 253 IDEDQIAANLVKHGPLAVGINAVFMQTYVGGVSCPYICGKHLDHGVLLVGYGSAGFAPIR 312

Query: 329 LKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
            KEKPYWIIKNSWGE+WGENGYYKICRGRNVCGVDSMVS+V+A
Sbjct: 313 FKEKPYWIIKNSWGENWGENGYYKICRGRNVCGVDSMVSSVSA 355


>gi|19849|emb|CAA78361.1| tobacco pre-pro-cysteine proteinase [Nicotiana tabacum]
          Length = 363

 Score =  535 bits (1378), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 262/366 (71%), Positives = 298/366 (81%), Gaps = 14/366 (3%)

Query: 8   LFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKF 67
           LFL+SL+ F   SS     D D LIRQV           E+ ++ LL AEHHFSLFK KF
Sbjct: 4   LFLLSLLAFVLFSSAIAFSDEDPLIRQVVS---------ETDDSHLLNAEHHFSLFKSKF 54

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
            K YAS+EEHDHRF +FKANLRRA  +Q LDPSA HGIT+FSDLTP+EFRRTYLGL +  
Sbjct: 55  GKIYASEEEHDHRFKVFKANLRRARLNQLLDPSAEHGITKFSDLTPSEFRRTYLGLHKPK 114

Query: 128 RLPK-DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG 186
             PK +A++APILPT+DLPADFDWR+ GAV  VK+QGSCGSCWSFSTTGA+EGA+FLATG
Sbjct: 115 --PKLNAEKAPILPTSDLPADFDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATG 172

Query: 187 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 246
           +LVSLSEQQLVDCDHECDPE+  +CD+GC GG   +AFEYTLKAGGL  E+DYPYTG D 
Sbjct: 173 ELVSLSEQQLVDCDHECDPEQQDACDAGCGGGHYATAFEYTLKAGGLQLEKDYPYTGKDG 232

Query: 247 GHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC 306
              C FDKSKI A+V NFSV+ LDEDQIAANLVK+GPLAV INA +MQTY+GGVSCP IC
Sbjct: 233 --KCHFDKSKICAAVTNFSVIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLIC 290

Query: 307 SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMV 366
            +R DHGVLLVGYGS G+APIRLKEK YWIIKNSWGE+WGE+GYYKICRG N+CGVD+MV
Sbjct: 291 FKRQDHGVLLVGYGSHGFAPIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMV 350

Query: 367 STVAAA 372
           STV AA
Sbjct: 351 STVTAA 356


>gi|71482944|gb|AAZ32411.1| cysteine proteinase glycinain type [Nicotiana benthamiana]
          Length = 355

 Score =  535 bits (1377), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/344 (75%), Positives = 294/344 (85%), Gaps = 12/344 (3%)

Query: 27  DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKA 86
           D D LIRQV       +S  E+ ++ LL AEHHFSLFK KF K YAS+EEHDHRF +FKA
Sbjct: 23  DEDPLIRQV-------VSETETDDSHLLNAEHHFSLFKSKFGKIYASEEEHDHRFKVFKA 75

Query: 87  NLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPK-DADQAPILPTNDLP 145
           NLRRA RHQ LDPSA HGIT+FSDLTP+EFRRTYLGL +    PK +A++APILPT+DLP
Sbjct: 76  NLRRARRHQLLDPSAEHGITKFSDLTPSEFRRTYLGLHKPK--PKLNAEKAPILPTSDLP 133

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
           AD+DWR+ GAV  VK+QGSCGSCWSFSTTGA+EGA+FLATG+LVSLSEQQLVDCDHECDP
Sbjct: 134 ADYDWRDHGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSEQQLVDCDHECDP 193

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
           E+  SCD+GC+GGLM +AFEYTLKAGGL RE+DYPYTG  +   C FDKSKIAA+V NFS
Sbjct: 194 EQQDSCDAGCSGGLMTTAFEYTLKAGGLQREKDYPYTG--KXGKCHFDKSKIAAAVTNFS 251

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           V+ LDEDQIAANLVK+GPLAV INA +MQTY+GGVSCP IC +R DHGVLLVGYGS G+A
Sbjct: 252 VIGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQDHGVLLVGYGSHGFA 311

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTV 369
           PIRLKEK YWIIKNSWGE+WGE+GYYKICRG N+CGVD+MVSTV
Sbjct: 312 PIRLKEKAYWIIKNSWGENWGEHGYYKICRGHNICGVDAMVSTV 355


>gi|225458119|ref|XP_002279862.1| PREDICTED: cysteine proteinase RD19a [Vitis vinifera]
 gi|302142581|emb|CBI19784.3| unnamed protein product [Vitis vinifera]
          Length = 368

 Score =  534 bits (1376), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 254/356 (71%), Positives = 289/356 (81%), Gaps = 13/356 (3%)

Query: 18  AVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEH 77
           AVS  +  +  + +IRQV           ES  +D L AE HF  FK +F K YA+ EEH
Sbjct: 21  AVSEASFDESDNLMIRQV-----------ESHVDDFLNAERHFEKFKARFQKTYATPEEH 69

Query: 78  DHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP 137
           D+RF +FKANLRRA RHQ LDPSA HG+TQFSDLTPAEFRR YLGL   LR P DA QAP
Sbjct: 70  DYRFNVFKANLRRAKRHQLLDPSAVHGVTQFSDLTPAEFRRDYLGLN-PLRFPADAQQAP 128

Query: 138 ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLV 197
           ILPT++LP DFDWRE GAV PVK+QG+CGSCWSFST GALEGA+FLATG L SLSEQQLV
Sbjct: 129 ILPTDNLPTDFDWRENGAVTPVKNQGNCGSCWSFSTIGALEGAHFLATGNLESLSEQQLV 188

Query: 198 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI 257
           DCD ECDPEE  +CD GCNGGLMN+AFEY LK GG+ RE+DYPYTG DR   CKF++SKI
Sbjct: 189 DCDRECDPEEYDACDDGCNGGLMNNAFEYILKTGGVEREKDYPYTGRDRS-PCKFNESKI 247

Query: 258 AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLV 317
            ASV+NFSVVS+DEDQIAANLVKNGPLAV INAV+MQTY  GVSCP++CS  LDHGVLLV
Sbjct: 248 VASVSNFSVVSIDEDQIAANLVKNGPLAVGINAVFMQTYTAGVSCPFLCSGELDHGVLLV 307

Query: 318 GYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAAV 373
           GYGSAGY+PIR KEKPYWI+KNSW + WGE+GYY+ICRG+N+CGVDSMVS+V AA+
Sbjct: 308 GYGSAGYSPIRFKEKPYWILKNSWSKYWGEHGYYRICRGQNMCGVDSMVSSVVAAI 363


>gi|297804580|ref|XP_002870174.1| hypothetical protein ARALYDRAFT_915142 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316010|gb|EFH46433.1| hypothetical protein ARALYDRAFT_915142 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 373

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 266/375 (70%), Positives = 303/375 (80%), Gaps = 17/375 (4%)

Query: 4   KTVVLFLVSLVVF-----SAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEH 58
           + V  FL++  +      SAV SG +       IRQV           E  +  LL AEH
Sbjct: 3   RVVFFFLIAATLLAVSLGSAVISGEVNYGFVNPIRQVVP---------EENDEHLLNAEH 53

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HFSLFK K+ K YA+QEEHDHRF +FKANLRRA R+Q LDPSA HG+TQFSDLTP EFRR
Sbjct: 54  HFSLFKSKYEKTYATQEEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLTPKEFRR 113

Query: 119 TYLGLRRK-LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            +LGL+R+  RLP D   APILPT+DLP +FDWRE+GAV PVK+QG CGSCWSFS  GAL
Sbjct: 114 KFLGLKRRGFRLPTDTQTAPILPTSDLPTEFDWREQGAVTPVKNQGMCGSCWSFSAIGAL 173

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EGA+FLAT +LVSLSEQQLVDCDHECDP +  SCDSGC+GGLMN+AFEY LKAGGLM+EE
Sbjct: 174 EGAHFLATKELVSLSEQQLVDCDHECDPAQANSCDSGCSGGLMNNAFEYALKAGGLMKEE 233

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DYPYTG D   ACKFDKSKIAASV+NFSVVS DEDQIAANLVK+GPLA+AINA++MQTYI
Sbjct: 234 DYPYTGRDNT-ACKFDKSKIAASVSNFSVVSSDEDQIAANLVKHGPLAIAINAMWMQTYI 292

Query: 298 GGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG- 356
           GGVSCPY+CS+  DHGVLLVG+GS+GYAPIRLKEKPYWIIKNSWG  WGE+GYYKICRG 
Sbjct: 293 GGVSCPYVCSKSQDHGVLLVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGP 352

Query: 357 RNVCGVDSMVSTVAA 371
            N+CG+D+MVSTVAA
Sbjct: 353 HNMCGMDTMVSTVAA 367


>gi|34761156|gb|AAQ81938.1| cysteine proteinase precursor [Ipomoea batatas]
          Length = 371

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 250/372 (67%), Positives = 302/372 (81%), Gaps = 20/372 (5%)

Query: 10  LVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNK 69
           L SL++ +  ++  +  D D LIRQV   G++         + LL A+HHF+LFK K+ K
Sbjct: 6   LPSLLIHALTAACVVRADEDPLIRQVVSDGED---------DALLNADHHFTLFKSKYGK 56

Query: 70  AYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRL 129
           +YA+QEEHD+R ++FKANLRRA RHQ LDPSA HG+T+FSDLTP EFRRTYLG+R+    
Sbjct: 57  SYATQEEHDYRLSVFKANLRRAKRHQMLDPSAVHGVTKFSDLTPKEFRRTYLGIRKSSSS 116

Query: 130 --------PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
                   P DA  A ILPT+DLP DF+WR+ GAV  VKDQG CGSCWSFSTTG LEG N
Sbjct: 117 KQKLKLKLPADAHAAEILPTSDLPFDFEWRDYGAVTGVKDQGLCGSCWSFSTTGTLEGTN 176

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
           FLATG+L+SL+EQ+LVDCDH CDP++ G+CD+GCNGGLM +A+EY L++GGL +E+DYPY
Sbjct: 177 FLATGELLSLNEQELVDCDHLCDPKKAGACDAGCNGGLMTTAYEYVLQSGGLEKEKDYPY 236

Query: 242 TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVS 301
           TG D    CKFDKSKIAA+VANFSVVSLDEDQIAANLVK+GPL+V IN+++MQTYIGGVS
Sbjct: 237 TGRD--GTCKFDKSKIAAAVANFSVVSLDEDQIAANLVKHGPLSVGINSIFMQTYIGGVS 294

Query: 302 CPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
           CPYICS++ LDHGVL+VGYG+AGYAPIR K+KPYWIIKNSWGE+WGE GYYKICRG N+C
Sbjct: 295 CPYICSKKNLDHGVLIVGYGAAGYAPIRFKDKPYWIIKNSWGENWGEEGYYKICRGNNIC 354

Query: 361 GVDSMVSTVAAA 372
           GVDSMVS+V AA
Sbjct: 355 GVDSMVSSVTAA 366


>gi|18414611|ref|NP_567489.1| Papain family cysteine protease [Arabidopsis thaliana]
 gi|2244977|emb|CAB10398.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|7268368|emb|CAB78661.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|14517442|gb|AAK62611.1| AT4g16190/dl4135w [Arabidopsis thaliana]
 gi|22136546|gb|AAM91059.1| AT4g16190/dl4135w [Arabidopsis thaliana]
 gi|22530956|gb|AAM96982.1| cysteine proteinase [Arabidopsis thaliana]
 gi|23397184|gb|AAN31875.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|110740834|dbj|BAE98514.1| cysteine proteinase like protein [Arabidopsis thaliana]
 gi|332658313|gb|AEE83713.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 373

 Score =  525 bits (1352), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 262/375 (69%), Positives = 301/375 (80%), Gaps = 17/375 (4%)

Query: 4   KTVVLFLVSLVVF-----SAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEH 58
           + V  FL++  +      S V SG + D     IRQV           E  +  LL AEH
Sbjct: 3   RVVFFFLIAATLLAGSLGSTVISGEVTDGFVNPIRQVVP---------EENDEQLLNAEH 53

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF+LFK K+ K YA+Q EHDHRF +FKANLRRA R+Q LDPSA HG+TQFSDLTP EFRR
Sbjct: 54  HFTLFKSKYEKTYATQVEHDHRFRVFKANLRRARRNQLLDPSAVHGVTQFSDLTPKEFRR 113

Query: 119 TYLGLRRK-LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            +LGL+R+  RLP D   APILPT+DLP +FDWRE+GAV PVK+QG CGSCWSFS  GAL
Sbjct: 114 KFLGLKRRGFRLPTDTQTAPILPTSDLPTEFDWREQGAVTPVKNQGMCGSCWSFSAIGAL 173

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EGA+FLAT +LVSLSEQQLVDCDHECDP +  SCDSGC+GGLMN+AFEY LKAGGLM+EE
Sbjct: 174 EGAHFLATKELVSLSEQQLVDCDHECDPAQANSCDSGCSGGLMNNAFEYALKAGGLMKEE 233

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DYPYTG D   ACKFDKSKI ASV+NFSVVS DEDQIAANLV++GPLA+AINA++MQTYI
Sbjct: 234 DYPYTGRDHT-ACKFDKSKIVASVSNFSVVSSDEDQIAANLVQHGPLAIAINAMWMQTYI 292

Query: 298 GGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG- 356
           GGVSCPY+CS+  DHGVLLVG+GS+GYAPIRLKEKPYWIIKNSWG  WGE+GYYKICRG 
Sbjct: 293 GGVSCPYVCSKSQDHGVLLVGFGSSGYAPIRLKEKPYWIIKNSWGAMWGEHGYYKICRGP 352

Query: 357 RNVCGVDSMVSTVAA 371
            N+CG+D+MVSTVAA
Sbjct: 353 HNMCGMDTMVSTVAA 367


>gi|25956267|dbj|BAC41322.1| hypothetical protein [Lotus japonicus]
          Length = 358

 Score =  523 bits (1346), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/346 (74%), Positives = 294/346 (84%), Gaps = 15/346 (4%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D VD +I QV D             ++ LGAEHHF  FK++F K YA++EEH +RF +FK
Sbjct: 24  DGVDPMICQVVD-------------DEGLGAEHHFLEFKRRFGKVYATEEEHGYRFNVFK 70

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           +N+ RA RHQ LDPSA HG+TQFSDLTP EF+ + LGLR  + LP DAD APILPT++LP
Sbjct: 71  SNMHRARRHQLLDPSAVHGVTQFSDLTPMEFQHSVLGLR-GVGLPSDADSAPILPTDNLP 129

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            DFDWR  GAV PVK+QGSCGSCWSFS TGALEGA+FL+TG+LVSLSEQQLVDCDH+CDP
Sbjct: 130 KDFDWRGHGAVTPVKNQGSCGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHQCDP 189

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
           EE GSC SGCNGGLMNSAFEY L  GG+MREEDYPY+GT+ G  CKFDK+KIAASVANFS
Sbjct: 190 EEAGSCGSGCNGGLMNSAFEYILNNGGVMREEDYPYSGTNGG-TCKFDKAKIAASVANFS 248

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           VVS DEDQIAANLVKNGPLAVAINAVYMQTY+GGVSCPY+CS++L+HGVLLVGYGS  YA
Sbjct: 249 VVSRDEDQIAANLVKNGPLAVAINAVYMQTYVGGVSCPYVCSKKLNHGVLLVGYGSESYA 308

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           PIR+K+KPYWIIKNSWGE+WGENGYYKICRGRN+CGVDSMVSTVAA
Sbjct: 309 PIRMKQKPYWIIKNSWGENWGENGYYKICRGRNICGVDSMVSTVAA 354


>gi|242061538|ref|XP_002452058.1| hypothetical protein SORBIDRAFT_04g017830 [Sorghum bicolor]
 gi|241931889|gb|EES05034.1| hypothetical protein SORBIDRAFT_04g017830 [Sorghum bicolor]
          Length = 371

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 253/354 (71%), Positives = 284/354 (80%), Gaps = 18/354 (5%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D  D LIRQV  GGD+        N   L AE HF  F ++F K+Y   EEH +R +IFK
Sbjct: 22  DTEDPLIRQVVPGGDD--------NELELNAESHFLSFVQRFGKSYKDAEEHAYRLSIFK 73

Query: 86  ANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR-----LPKDADQAPILP 140
           ANLRRA RHQ LDPSA HG+T+FSDLTPAEFRRTYLGLR+  R     L K A++AP+LP
Sbjct: 74  ANLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGKSANEAPVLP 133

Query: 141 TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD 200
           T+ LP DFDWR+ GAV PVK+QGSCGSCWSFST+GALEGA++LATGKL  LSEQQ+VDCD
Sbjct: 134 TDGLPDDFDWRDHGAVTPVKNQGSCGSCWSFSTSGALEGAHYLATGKLEVLSEQQMVDCD 193

Query: 201 HECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAAS 260
           H CD  EP SCDSGCNGGLM +AF Y  KAGGL  E+DYPYTG+D    CKFDKSKI AS
Sbjct: 194 HVCDTSEPDSCDSGCNGGLMTNAFSYLQKAGGLESEKDYPYTGSD--DKCKFDKSKIVAS 251

Query: 261 VANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYG 320
           V NFSVVS+DE QIAANL+K+GPLA+ INA YMQTYIGGVSCPYIC R LDHGVLLVGYG
Sbjct: 252 VQNFSVVSVDEGQIAANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRTLDHGVLLVGYG 311

Query: 321 SAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           +AG+APIRLK+KPYWIIKNSWGE+WGENGYYKICRG   RN CGVDSMVSTV+A
Sbjct: 312 AAGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSA 365


>gi|194705198|gb|ACF86683.1| unknown [Zea mays]
 gi|413936851|gb|AFW71402.1| cysteine protease1 [Zea mays]
          Length = 371

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 251/355 (70%), Positives = 285/355 (80%), Gaps = 20/355 (5%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDL-LGAEHHFSLFKKKFNKAYASQEEHDHRFTIF 84
           D  D LIRQV  GGD+         NDL L AE HF  F ++F K+Y   +EH +R ++F
Sbjct: 22  DAEDPLIRQVVPGGDD---------NDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVF 72

Query: 85  KANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR-----LPKDADQAPIL 139
           KANLRRA RHQ LDPSA HG+T+FSDLTPAEFRRTYLGLR+  R     L + A +AP+L
Sbjct: 73  KANLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVL 132

Query: 140 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 199
           PT+ LP DFDWR+ GAVGPVK+QGSCGSCWSFS +GALEGA++LATGKL  LSEQQ VDC
Sbjct: 133 PTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDC 192

Query: 200 DHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAA 259
           DHECD  EP SCDSGCNGGLM +AF Y  KAGGL  E+DYPYTG+D    CKFDKSKI A
Sbjct: 193 DHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG--KCKFDKSKIVA 250

Query: 260 SVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGY 319
           SV NFSVVS+DE QI+ANL+K+GPLA+ INA YMQTYIGGVSCPYIC R LDHGVLLVGY
Sbjct: 251 SVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGY 310

Query: 320 GSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           G++G+APIRLK+KPYWIIKNSWGE+WGENGYYKICRG   RN CGVDSMVSTV+A
Sbjct: 311 GASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSA 365


>gi|357148994|ref|XP_003574963.1| PREDICTED: cysteine proteinase 1-like [Brachypodium distachyon]
          Length = 377

 Score =  513 bits (1320), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 251/354 (70%), Positives = 280/354 (79%), Gaps = 18/354 (5%)

Query: 27  DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKA 86
           D D LIRQV  G D         +NDL     HF+ F ++F K Y   EEH HR ++FKA
Sbjct: 28  DEDPLIRQVVGGAD-------GDDNDLE-LSSHFTSFVQRFGKTYKDAEEHAHRLSVFKA 79

Query: 87  NLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR-----LPKDADQAPILPT 141
           NLRRA RHQ LDPSA HGIT+FSDLTPAEFRRT+LGL+   R     +   A  AP+LPT
Sbjct: 80  NLRRARRHQLLDPSAEHGITKFSDLTPAEFRRTFLGLKTSRRSFLREIGGSAHDAPVLPT 139

Query: 142 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDH 201
           + LP DFDWR+ GAVGPVK+QGSCGSCWSFS +GALEGAN+LATGK+  LSEQQ VDCDH
Sbjct: 140 DGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLATGKMEVLSEQQFVDCDH 199

Query: 202 ECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV 261
           ECDPEEP SCD+GCNGGLM SAF Y LK+GGL RE+DYPYTG D    CKFDKSKI ASV
Sbjct: 200 ECDPEEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGRD--GTCKFDKSKIVASV 257

Query: 262 ANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGS 321
            NFSVVS+DE+QIAANLVK+GPLA+ INA YMQTYIGGVSCPYIC R LDHGVLLVGYG+
Sbjct: 258 QNFSVVSVDEEQIAANLVKHGPLAIGINAAYMQTYIGGVSCPYICGRSLDHGVLLVGYGA 317

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAAA 372
           +G+AP RLK KPYW+IKNSWGE+WGE GYYKICRG   RN CGVDSMVSTVAAA
Sbjct: 318 SGFAPSRLKNKPYWVIKNSWGENWGEKGYYKICRGSNVRNKCGVDSMVSTVAAA 371


>gi|162459555|ref|NP_001105685.1| cysteine proteinase 1 precursor [Zea mays]
 gi|1706260|sp|Q10716.1|CYSP1_MAIZE RecName: Full=Cysteine proteinase 1; Flags: Precursor
 gi|643597|dbj|BAA08244.1| cysteine proteinase [Zea mays]
          Length = 371

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 250/355 (70%), Positives = 284/355 (80%), Gaps = 20/355 (5%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDL-LGAEHHFSLFKKKFNKAYASQEEHDHRFTIF 84
           D  D LIRQV  GGD+         NDL L AE HF  F ++F K+Y   +EH +R ++F
Sbjct: 22  DAEDPLIRQVVPGGDD---------NDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVF 72

Query: 85  KANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR-----LPKDADQAPIL 139
           K NLRRA RHQ LDPSA HG+T+FSDLTPAEFRRTYLGLR+  R     L + A +AP+L
Sbjct: 73  KDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVL 132

Query: 140 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 199
           PT+ LP DFDWR+ GAVGPVK+QGSCGSCWSFS +GALEGA++LATGKL  LSEQQ VDC
Sbjct: 133 PTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDC 192

Query: 200 DHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAA 259
           DHECD  EP SCDSGCNGGLM +AF Y  KAGGL  E+DYPYTG+D    CKFDKSKI A
Sbjct: 193 DHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSDG--KCKFDKSKIVA 250

Query: 260 SVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGY 319
           SV NFSVVS+DE QI+ANL+K+GPLA+ INA YMQTYIGGVSCPYIC R LDHGVLLVGY
Sbjct: 251 SVQNFSVVSVDEAQISANLIKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGY 310

Query: 320 GSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           G++G+APIRLK+KPYWIIKNSWGE+WGENGYYKICRG   RN CGVDSMVSTV+A
Sbjct: 311 GASGFAPIRLKDKPYWIIKNSWGENWGENGYYKICRGSNVRNKCGVDSMVSTVSA 365


>gi|357162946|ref|XP_003579573.1| PREDICTED: cysteine proteinase 1-like [Brachypodium distachyon]
          Length = 376

 Score =  509 bits (1312), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/351 (70%), Positives = 280/351 (79%), Gaps = 18/351 (5%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D LI QV  GGDE        N   L AE HF+ F ++FNK+Y   +EH HR ++F ANL
Sbjct: 29  DPLIEQVV-GGDE-------KNELELNAEAHFASFVQRFNKSYRDADEHAHRLSVFTANL 80

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR-----LPKDADQAPILPTND 143
           RRA RHQ+LDPSA HG+T+FSDLTP EFR  +LGLR+  R     L   A  AP LPT+ 
Sbjct: 81  RRARRHQRLDPSAVHGVTKFSDLTPDEFRDRFLGLRKYRRSFLKGLSGSAHDAPALPTDG 140

Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
           LP +FDWRE GAVGPVKDQGSCGSCWSFST+GALEGA++LATGKL  LSEQQ+VDCDHEC
Sbjct: 141 LPTEFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHYLATGKLEVLSEQQMVDCDHEC 200

Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN 263
           DP EP +CD+GCNGGLM +AF Y  KAGGL  E+DYPYTG  RG ACKFDKSKIAA V N
Sbjct: 201 DPSEPRACDAGCNGGLMTTAFSYLAKAGGLETEKDYPYTG--RGGACKFDKSKIAAQVKN 258

Query: 264 FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAG 323
           FS V++DEDQIAANLVK+GPLA+ INAV+MQTYIGGVSCP+IC R LDHGVLLVGYGSAG
Sbjct: 259 FSTVAVDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPFICGRHLDHGVLLVGYGSAG 318

Query: 324 YAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           YAP+R KEKPYWIIKNSWGE+WGE+GYYKICRG   +N CGVDSMVSTV A
Sbjct: 319 YAPLRFKEKPYWIIKNSWGENWGESGYYKICRGAHVKNKCGVDSMVSTVTA 369


>gi|115446097|ref|NP_001046828.1| Os02g0469600 [Oryza sativa Japonica Group]
 gi|47497527|dbj|BAD19579.1| putative cysteine proteinase 1 precursor [Oryza sativa Japonica
           Group]
 gi|113536359|dbj|BAF08742.1| Os02g0469600 [Oryza sativa Japonica Group]
 gi|215701326|dbj|BAG92750.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215704370|dbj|BAG93804.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215708762|dbj|BAG94031.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218200777|gb|EEC83204.1| hypothetical protein OsI_28465 [Oryza sativa Indica Group]
 gi|222622835|gb|EEE56967.1| hypothetical protein OsJ_06681 [Oryza sativa Japonica Group]
          Length = 373

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 247/362 (68%), Positives = 287/362 (79%), Gaps = 18/362 (4%)

Query: 18  AVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEH 77
           AV++ ++  + + LIRQV  GGD+        N   L AE HF+ F ++F K+Y   +EH
Sbjct: 16  AVAAASVPGEEEPLIRQVVGGGDD--------NELELNAERHFASFVQRFGKSYRDADEH 67

Query: 78  DHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR-----LPKD 132
            +R ++FKANLRRA RHQ LDPSA HG+T+FSDLTPAEFRR YLGLR   R     L   
Sbjct: 68  AYRLSVFKANLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRAYLGLRTSRRAFLRGLGGS 127

Query: 133 ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLS 192
           A +AP+LPT+ LP DFDWR+ GAVGPVK+QGSCGSCWSFS +GALEGAN+LATGK+  LS
Sbjct: 128 AHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLATGKMDVLS 187

Query: 193 EQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 252
           EQQ+VDCDHECD  EP SCD+GCNGGLM +AF Y LK+GGL  E+DYPYTG D    CKF
Sbjct: 188 EQQMVDCDHECDSSEPDSCDAGCNGGLMTNAFSYLLKSGGLESEKDYPYTGRD--GTCKF 245

Query: 253 DKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDH 312
           DKSKI  SV NFSVVS+DEDQIAANLVK+GPLA+ INA YMQTYIGGVSCPYIC R LDH
Sbjct: 246 DKSKIVTSVQNFSVVSVDEDQIAANLVKHGPLAIGINAAYMQTYIGGVSCPYICGRHLDH 305

Query: 313 GVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTV 369
           GVLLVGYG++G+APIRLK+K YWIIKNSWGE+WGE+GYYKICRG   RN CGVDSMVSTV
Sbjct: 306 GVLLVGYGASGFAPIRLKDKAYWIIKNSWGENWGEHGYYKICRGSNVRNKCGVDSMVSTV 365

Query: 370 AA 371
           +A
Sbjct: 366 SA 367


>gi|116787909|gb|ABK24688.1| unknown [Picea sitchensis]
 gi|224284108|gb|ACN39791.1| unknown [Picea sitchensis]
 gi|224285024|gb|ACN40241.1| unknown [Picea sitchensis]
          Length = 366

 Score =  506 bits (1303), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 243/368 (66%), Positives = 289/368 (78%), Gaps = 10/368 (2%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHE--STNNDLLGAEHHFSLFK 64
            L   +  +FS +   +     D LIRQVTD   E++S  +     + L  AE HF  F 
Sbjct: 5   TLLFSAFCIFSVIFLSSATKPDDDLIRQVTD---EVVSDPQILDARSALFNAEVHFRHFI 61

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
           +++ K Y+  EEH+HRF +FK+NL RA  HQKLDP A+HG+T+FSDLT  EFR  YLGLR
Sbjct: 62  RRYGKKYSGPEEHEHRFGVFKSNLLRALEHQKLDPRASHGVTKFSDLTQEEFRHQYLGLR 121

Query: 125 RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
                 +DA  APILPTNDLP DFDWREKGAV  VK+QGSCGSCW+FSTTGALEGANFL 
Sbjct: 122 APPL--RDAHDAPILPTNDLPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLK 179

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TG+LVSLSEQQLVDCDHECDP +  SCDSGCNGGLM SA++Y LK+GGL +EEDYPYTG 
Sbjct: 180 TGELVSLSEQQLVDCDHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGK 239

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY 304
           D    C F+K+KI A V+NFSVVS+DE QIAANLVKNGPL+V INA +MQTY+GGVSCPY
Sbjct: 240 DG--TCSFNKNKIVAHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGGVSCPY 297

Query: 305 ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVD 363
           +CS+R LDHGVLLVGYG+A +APIR+K+KPYW+IKNSWG +WGENGYYK+CRG NVCG++
Sbjct: 298 VCSKRNLDHGVLLVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGIN 357

Query: 364 SMVSTVAA 371
           +MVSTVAA
Sbjct: 358 NMVSTVAA 365


>gi|116779325|gb|ABK21238.1| unknown [Picea sitchensis]
 gi|148905850|gb|ABR16087.1| unknown [Picea sitchensis]
 gi|148908434|gb|ABR17330.1| unknown [Picea sitchensis]
 gi|148908881|gb|ABR17545.1| unknown [Picea sitchensis]
 gi|224286109|gb|ACN40765.1| unknown [Picea sitchensis]
          Length = 366

 Score =  506 bits (1302), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 243/368 (66%), Positives = 289/368 (78%), Gaps = 10/368 (2%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHE--STNNDLLGAEHHFSLFK 64
            L   +  +FS +   +     D LIRQVTD   E++S  +     + L  AE HF  F 
Sbjct: 5   TLLFSAFCIFSVIFLSSATRPDDDLIRQVTD---EVVSDPQILDARSALFNAEVHFRHFI 61

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
           +++ K Y+  EEH+HRF +FK+NL RA  HQKLDP A+HG+T+FSDLT  EFR  YLGLR
Sbjct: 62  RRYGKKYSGPEEHEHRFGVFKSNLLRALEHQKLDPRASHGVTKFSDLTQEEFRHQYLGLR 121

Query: 125 RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
                 +DA  APILPTNDLP DFDWREKGAV  VK+QGSCGSCW+FSTTGALEGANFL 
Sbjct: 122 APPL--RDAHDAPILPTNDLPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLK 179

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TG+LVSLSEQQLVDCDHECDP +  SCDSGCNGGLM SA++Y LK+GGL +EEDYPYTG 
Sbjct: 180 TGELVSLSEQQLVDCDHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGK 239

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY 304
           D    C F+K+KI A V+NFSVVS+DE QIAANLVKNGPL+V INA +MQTY+GGVSCPY
Sbjct: 240 DG--TCSFNKNKIVAHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGGVSCPY 297

Query: 305 ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVD 363
           +CS+R LDHGVLLVGYG+A +APIR+K+KPYW+IKNSWG +WGENGYYK+CRG NVCG++
Sbjct: 298 VCSKRNLDHGVLLVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGIN 357

Query: 364 SMVSTVAA 371
           +MVSTVAA
Sbjct: 358 NMVSTVAA 365


>gi|41019551|tpe|CAD66657.1| TPA: putative cysteine proteinase precursor [Hordeum vulgare subsp.
           vulgare]
 gi|326489967|dbj|BAJ94057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326525847|dbj|BAJ93100.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 377

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 245/353 (69%), Positives = 279/353 (79%), Gaps = 18/353 (5%)

Query: 27  DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKA 86
           D + LIRQV  G D +       +NDL   +  F  F ++F K Y   EEH HR ++FKA
Sbjct: 28  DEEPLIRQVVGGADPL-------DNDLE-LDSQFVGFVQRFGKTYRDAEEHAHRLSVFKA 79

Query: 87  NLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR-----LPKDADQAPILPT 141
           NLRRA RHQ LDPSA HG+T+FSDLTPAEFRRTYLGL+   R     +   A  AP+LPT
Sbjct: 80  NLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLKTTRRSFLREMAGSAHDAPVLPT 139

Query: 142 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDH 201
           + LP DFDWR+ GAVGPVK+QGSCGSCWSFS +GALEGAN+LA+GK+  LSEQQLVDCDH
Sbjct: 140 DGLPEDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGANYLASGKMEVLSEQQLVDCDH 199

Query: 202 ECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV 261
           ECDP EP SCD+GCNGGLM SAF Y LK+GGL RE+DYPYTG D    CKFDKSKIAASV
Sbjct: 200 ECDPSEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKD--GTCKFDKSKIAASV 257

Query: 262 ANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGS 321
            N+SVV++DE+QIAANLVK GPLA+ INA YMQTYIGGVSCPYIC R LDHGVLLVGYG+
Sbjct: 258 QNYSVVAVDEEQIAANLVKYGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGA 317

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           +G+AP R KEKPYWIIKNSWGE+WG+ GYYKICRG   RN CGVDSMVSTV+A
Sbjct: 318 SGFAPSRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSMVSTVSA 370


>gi|224285931|gb|ACN40679.1| unknown [Picea sitchensis]
          Length = 366

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 242/368 (65%), Positives = 288/368 (78%), Gaps = 10/368 (2%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHE--STNNDLLGAEHHFSLFK 64
            L   +  +FS +   +     D LIRQVTD   E++S  +     + L  AE HF  F 
Sbjct: 5   TLLFSAFCIFSVIFLSSATRPDDDLIRQVTD---EVVSDPQILDARSALFNAEVHFRHFI 61

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
           +++ K Y+  EEH+HRF +FK+NL RA  HQKLDP A+HG+T+FSDLT   FR  YLGLR
Sbjct: 62  RRYGKKYSGPEEHEHRFGVFKSNLLRALEHQKLDPRASHGVTKFSDLTQEGFRHQYLGLR 121

Query: 125 RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
                 +DA  APILPTNDLP DFDWREKGAV  VK+QGSCGSCW+FSTTGALEGANFL 
Sbjct: 122 APPL--RDAHDAPILPTNDLPEDFDWREKGAVTEVKNQGSCGSCWAFSTTGALEGANFLK 179

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TG+LVSLSEQQLVDCDHECDP +  SCDSGCNGGLM SA++Y LK+GGL +EEDYPYTG 
Sbjct: 180 TGELVSLSEQQLVDCDHECDPSDARSCDSGCNGGLMTSAYQYALKSGGLEKEEDYPYTGK 239

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY 304
           D    C F+K+KI A V+NFSVVS+DE QIAANLVKNGPL+V INA +MQTY+GGVSCPY
Sbjct: 240 DG--TCSFNKNKIVAHVSNFSVVSIDEGQIAANLVKNGPLSVGINAAFMQTYVGGVSCPY 297

Query: 305 ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVD 363
           +CS+R LDHGVLLVGYG+A +APIR+K+KPYW+IKNSWG +WGENGYYK+CRG NVCG++
Sbjct: 298 VCSKRNLDHGVLLVGYGAAAFAPIRMKDKPYWVIKNSWGPNWGENGYYKLCRGHNVCGIN 357

Query: 364 SMVSTVAA 371
           +MVSTVAA
Sbjct: 358 NMVSTVAA 365


>gi|194352746|emb|CAQ00101.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 381

 Score =  503 bits (1294), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/351 (70%), Positives = 278/351 (79%), Gaps = 19/351 (5%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D LI QV  GGD       + N   L AE HF+ F ++F K+Y   +EH+HR ++F+ANL
Sbjct: 35  DPLIEQVV-GGD-------AENELELNAEAHFASFVRRFGKSYRDADEHEHRLSVFRANL 86

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR-----LPKDADQAPILPTND 143
           RRA RHQ+LDPSA HGIT+FSDLTP EFR  +LGLR+  R     +   A  AP LPT+ 
Sbjct: 87  RRARRHQRLDPSAVHGITKFSDLTPDEFRERFLGLRKSRRSFLKGISGSAHDAPALPTDG 146

Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
           LP +FDWRE GAVGPVKDQGSCGSCWSFST+GALEGAN+LATGKL  LSEQQLVDCDHEC
Sbjct: 147 LPTEFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGANYLATGKLEVLSEQQLVDCDHEC 206

Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN 263
           DP EP +CD+GCNGGLM +AF Y  KAGGL  E+DYPYTG  R  ACKFDKSKIAA V N
Sbjct: 207 DPSEPRACDAGCNGGLMTTAFSYLAKAGGLETEKDYPYTG--RNSACKFDKSKIAAQVKN 264

Query: 264 FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAG 323
           FS V++DEDQIAANLVK+GPLA+ INAV+MQTYIGGVSCPYIC R LDH V LVGYGSAG
Sbjct: 265 FSTVAIDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPYICGRHLDH-VFLVGYGSAG 323

Query: 324 YAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           YAP+R KEKPYWIIKNSWGE+WGE+GYYKICRG   +N CGVDSMVSTV A
Sbjct: 324 YAPLRFKEKPYWIIKNSWGENWGESGYYKICRGPHVKNKCGVDSMVSTVTA 374


>gi|116786550|gb|ABK24153.1| unknown [Picea sitchensis]
          Length = 394

 Score =  499 bits (1284), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 243/370 (65%), Positives = 287/370 (77%), Gaps = 9/370 (2%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDV-DQLIRQVTD-GGDEILSHHESTNNDLLGAEHHFSLFK 64
           +LFLV  +      + + ++ V    IR+VTD  G+ ++   +     LL AE HF+ F 
Sbjct: 23  LLFLVPTITAHVHEASSDLNAVLPNPIREVTDMDGEGVI---DDLRRGLLNAEAHFAHFV 79

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
           KKFNK Y+  EEH  RF+IFK NL +A RHQKLD  A HGI +FSDLT  EF   YLGL 
Sbjct: 80  KKFNKEYSGAEEHARRFSIFKKNLHKALRHQKLDRDAIHGINKFSDLTEEEFHEQYLGLT 139

Query: 125 RKLR-LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
              R L +    APILPT+DLP DFDWRE GAV PVK+QG+CGSCW+FSTTGA+EGANF+
Sbjct: 140 TPPRSLSQRTQPAPILPTDDLPPDFDWRELGAVTPVKNQGACGSCWTFSTTGAMEGANFM 199

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
            TGKL+SLSEQQLVDCDHECD  EP  CDSGCNGGLM +A++Y LKAGGL REEDYPYTG
Sbjct: 200 KTGKLISLSEQQLVDCDHECDSSEPDVCDSGCNGGLMTTAYQYALKAGGLQREEDYPYTG 259

Query: 244 TDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP 303
            D   +CKFD +K+AA VANFS VS+DEDQIAANLVKNGPLAV INA +MQTY+GGVSCP
Sbjct: 260 IDG--SCKFDNTKVAAMVANFSTVSIDEDQIAANLVKNGPLAVGINAAFMQTYVGGVSCP 317

Query: 304 YICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGV 362
           Y+C+++ LDHGVLLVGYG+AGYAP RLK KP+WIIKNSWG  WGE+GYYK+CRG NVCG+
Sbjct: 318 YVCNKQNLDHGVLLVGYGAAGYAPGRLKNKPFWIIKNSWGPDWGEDGYYKLCRGHNVCGI 377

Query: 363 DSMVSTVAAA 372
           ++MVSTVAAA
Sbjct: 378 NTMVSTVAAA 387


>gi|56682917|gb|AAW21813.1| cysteine protease [Triticum aestivum]
          Length = 377

 Score =  497 bits (1279), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 243/353 (68%), Positives = 279/353 (79%), Gaps = 18/353 (5%)

Query: 27  DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKA 86
           D + LIRQV  G D + +  E  ++ LLG       F ++F K Y   EEH HR ++FKA
Sbjct: 28  DEEPLIRQVVGGADPLDNDLE-LDSQLLG-------FVQRFGKTYRDAEEHAHRLSVFKA 79

Query: 87  NLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR-----LPKDADQAPILPT 141
           NLRRA RHQ LDPSA HG+T+FSDLTPAEFRRT+LGL+   R     +   A  AP+LPT
Sbjct: 80  NLRRARRHQMLDPSAEHGVTKFSDLTPAEFRRTFLGLKTTRRSFLREMAGSAHDAPVLPT 139

Query: 142 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDH 201
           + LP DFDWR+ GAVGPVK+QGSC SCWSFS +GALEGAN+LATGK+  LSEQQLVDCDH
Sbjct: 140 DGLPEDFDWRDHGAVGPVKNQGSCWSCWSFSASGALEGANYLATGKMEVLSEQQLVDCDH 199

Query: 202 ECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV 261
           ECDP EP SCD+GCNGGLM SAF Y LK+GGL RE+DYPYTG D    CKF+KSKIAASV
Sbjct: 200 ECDPAEPDSCDAGCNGGLMTSAFSYLLKSGGLEREKDYPYTGKD--GTCKFEKSKIAASV 257

Query: 262 ANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGS 321
            NFSVV++DE+QIAANLV+ GPLA+ INA YMQTYIGGVSCPYIC R LDHGVLLVGYG+
Sbjct: 258 QNFSVVAVDEEQIAANLVEYGPLAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGA 317

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           +G+AP R KEKPYWIIKNSWGE+WG+ GYYKICRG   RN CGVDSMVSTV+A
Sbjct: 318 SGFAPSRFKEKPYWIIKNSWGENWGDKGYYKICRGSNVRNKCGVDSMVSTVSA 370


>gi|40806502|gb|AAR92156.1| putative cysteine protease 3 [Iris x hollandica]
          Length = 292

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 231/285 (81%), Positives = 255/285 (89%), Gaps = 2/285 (0%)

Query: 88  LRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR-KLRLPKDADQAPILPTNDLPA 146
           +RRA RHQ+LDP+A HG+TQFSDLTP EF+RTYLGLR+ K  L   A +AP+LPTNDLP 
Sbjct: 1   MRRARRHQQLDPTAVHGVTQFSDLTPGEFKRTYLGLRKGKKHLVGSAHEAPLLPTNDLPE 60

Query: 147 DFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPE 206
           DFDWR+KGAV  VK+QGSCGSCWSFST+GALEGANFLATGKL +LSEQQ+VDCDHECD E
Sbjct: 61  DFDWRDKGAVTGVKNQGSCGSCWSFSTSGALEGANFLATGKLETLSEQQMVDCDHECDAE 120

Query: 207 EPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV 266
           EP  CD GCNGGLMN+AF+Y  K GGL  E+DYPYTGTDRG  CKFD+SKI ASV NFSV
Sbjct: 121 EPDDCDQGCNGGLMNTAFQYLQKVGGLESEKDYPYTGTDRG-TCKFDESKIKASVHNFSV 179

Query: 267 VSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAP 326
           VS+DE+QIAANLVK+GPLA+AINAV+MQTYIGGVSCPYIC + LDHGVLLVGYGSAGYAP
Sbjct: 180 VSIDEEQIAANLVKHGPLAIAINAVFMQTYIGGVSCPYICGKHLDHGVLLVGYGSAGYAP 239

Query: 327 IRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           IRLKEKPYWIIKNSWGE+WGENGYYKICRGRNVCGVDSMVSTV A
Sbjct: 240 IRLKEKPYWIIKNSWGETWGENGYYKICRGRNVCGVDSMVSTVTA 284


>gi|38344381|emb|CAD40319.2| OSJNBb0054B09.3 [Oryza sativa Japonica Group]
 gi|116309071|emb|CAH66180.1| OSIGBa0130O15.4 [Oryza sativa Indica Group]
 gi|116309098|emb|CAH66205.1| OSIGBa0148D14.11 [Oryza sativa Indica Group]
          Length = 381

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 238/349 (68%), Positives = 276/349 (79%), Gaps = 16/349 (4%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D LI QV  GG+E         +  L AE HF+ F+++F + Y    E  +R ++F ANL
Sbjct: 35  DPLIEQVVGGGEE--------EDAQLDAEAHFASFERRFGRTYRDAGERAYRMSVFAANL 86

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR---KLRLPKDADQAPILPTNDLP 145
           RRA RHQ+LDP+ATHG+T+FSDLTP EFR  +LGLRR   +  +  +  +APILPT+ LP
Sbjct: 87  RRARRHQRLDPTATHGVTKFSDLTPGEFRDRFLGLRRPSLEGLVGGEPHEAPILPTDGLP 146

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            DFDWRE GAVGPVKDQGSCGSCWSFST+GALEGA+FLATGKL  LSEQQ+VDCDHECD 
Sbjct: 147 DDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDA 206

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
            E  +CDSGCNGGLM +AF Y +K+GGL  E+DYPY G  R + CKFDKSKI A V NFS
Sbjct: 207 SESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYAG--RENTCKFDKSKIVAQVKNFS 264

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           V+S++EDQIAANLVK+GPLA+AINA YMQTYIGGVSCP+IC R LDHGVLLVGYGSAGYA
Sbjct: 265 VISVNEDQIAANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYGSAGYA 324

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           PIR KEKPYWIIKNSWGE+WGE GYYKICRG   +N CGVDSMVS+V A
Sbjct: 325 PIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTA 373


>gi|1619903|gb|AAB16996.1| thiol protease isoform B, partial [Glycine max]
          Length = 319

 Score =  487 bits (1253), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 234/314 (74%), Positives = 268/314 (85%), Gaps = 11/314 (3%)

Query: 62  LFKKKFN-KAYASQEEHDHRFTIFKANLRRAARHQKLDPSAT---HGITQFSDLTPAEFR 117
           L + KF  + YA++EEHDHRF +FK+NLRRA+      PS+T   HG+T+FSDLTPAEFR
Sbjct: 7   LSRPKFRPRPYATKEEHDHRFGVFKSNLRRAS----CTPSSTPRVHGVTKFSDLTPAEFR 62

Query: 118 RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           R +LGL+  +R P  A +APILPT DLP DFDWR+KGAV  VKDQG CGSCWSFSTTGAL
Sbjct: 63  RQFLGLK-AVRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDQGGCGSCWSFSTTGAL 121

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EGA +LATG+LVSLSEQQLVDCDH CDPEE G+CDSGCNGGLMN+AFEY L++GG+ +E+
Sbjct: 122 EGAYYLATGELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFEYILQSGGVQKEK 181

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DYPYTG D    CKFDK+K+AA+V+N+SVV LDE+QIAANLVKNGPLAVAINAV+MQTY+
Sbjct: 182 DYPYTGRD--GTCKFDKTKVAATVSNYSVVCLDEEQIAANLVKNGPLAVAINAVFMQTYV 239

Query: 298 GGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR 357
           GGVSCPYIC + LDHGVLLVGYG   YAPIR K KPYWIIKNSWGESWGENGY +ICRGR
Sbjct: 240 GGVSCPYICGKHLDHGVLLVGYGEGAYAPIRFKNKPYWIIKNSWGESWGENGYDEICRGR 299

Query: 358 NVCGVDSMVSTVAA 371
           NVCGVDSMVSTVAA
Sbjct: 300 NVCGVDSMVSTVAA 313


>gi|302771610|ref|XP_002969223.1| hypothetical protein SELMODRAFT_91274 [Selaginella moellendorffii]
 gi|300162699|gb|EFJ29311.1| hypothetical protein SELMODRAFT_91274 [Selaginella moellendorffii]
          Length = 367

 Score =  480 bits (1236), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 227/343 (66%), Positives = 270/343 (78%), Gaps = 3/343 (0%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D  IR+VTD   +  +        LL  E HF  F  +F KAYA+ E + HR  +F+ANL
Sbjct: 27  DSGIREVTDTARDESNGRLDAAKALLDVETHFKSFIARFGKAYATAEAYAHRLKVFEANL 86

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
            RA  HQ LDPSA HGITQFSDLT  EF++ +LGLR   RL ++A++AP+LPTNDLP DF
Sbjct: 87  VRAVSHQALDPSAVHGITQFSDLTEEEFKQQFLGLRVPSRL-REANKAPVLPTNDLPEDF 145

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWRE GAV  VK+QG+CGSCW+FSTTGA+EGA+FL TGKL+SLSEQQLVDCDH CDP + 
Sbjct: 146 DWREHGAVTEVKNQGACGSCWAFSTTGAIEGAHFLETGKLISLSEQQLVDCDHSCDPTDK 205

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
            SCD+GCNGGLM +A++Y +K+GGL  E DYPYTG   G  C+F+ +KI ASVANFS VS
Sbjct: 206 VSCDAGCNGGLMTNAYDYVMKSGGLETETDYPYTGNSNG-KCQFNANKIVASVANFSTVS 264

Query: 269 LDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPI 327
           LDEDQIAANLVK+GPLA+ INAV+MQTYIGGVSCP ICS+  +DHGVLLVGYG+ GYAPI
Sbjct: 265 LDEDQIAANLVKHGPLAIGINAVFMQTYIGGVSCPIICSKHHIDHGVLLVGYGAKGYAPI 324

Query: 328 RLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVA 370
           R  EKPYWIIKNSWG +WGE GYYKICRG  +CG+++MVSTVA
Sbjct: 325 RFTEKPYWIIKNSWGATWGEQGYYKICRGHGMCGMNTMVSTVA 367


>gi|302754322|ref|XP_002960585.1| hypothetical protein SELMODRAFT_266583 [Selaginella moellendorffii]
 gi|300171524|gb|EFJ38124.1| hypothetical protein SELMODRAFT_266583 [Selaginella moellendorffii]
          Length = 330

 Score =  476 bits (1224), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 221/319 (69%), Positives = 261/319 (81%), Gaps = 3/319 (0%)

Query: 53  LLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLT 112
           LL  E HF  F  +F KAYA+ E + HR  +F+ANL RA  HQ LDPSA HGITQFSDLT
Sbjct: 14  LLDVETHFKSFIARFGKAYATAEAYAHRLKVFEANLVRAVSHQALDPSAVHGITQFSDLT 73

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EF++ +LGLR   RL ++A++AP+LPTNDLP DFDWRE GAV  VK+QG+CGSCW+FS
Sbjct: 74  EEEFKQQFLGLRVPSRL-REANKAPVLPTNDLPEDFDWREHGAVTEVKNQGACGSCWAFS 132

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGA+EGA+FL TGKL+SLSEQQLVDCDH CDP +  SCD+GCNGGLM +A++Y +K+GG
Sbjct: 133 TTGAIEGAHFLETGKLISLSEQQLVDCDHSCDPTDKVSCDAGCNGGLMTNAYDYVMKSGG 192

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  E DYPYTG   G  C+F+ +KI ASVANFS VSLDEDQIAANLVK+GPLA+ INAV+
Sbjct: 193 LETETDYPYTGNSNG-KCQFNANKIVASVANFSTVSLDEDQIAANLVKHGPLAIGINAVF 251

Query: 293 MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
           MQTYIGGVSCP ICS+  +DHGVLLVGYG+ GYAPIR  EKPYWIIKNSWG +WGE GYY
Sbjct: 252 MQTYIGGVSCPIICSKHHIDHGVLLVGYGAKGYAPIRFTEKPYWIIKNSWGATWGEQGYY 311

Query: 352 KICRGRNVCGVDSMVSTVA 370
           KICRG  +CG+++MVSTVA
Sbjct: 312 KICRGHGMCGMNTMVSTVA 330


>gi|222628593|gb|EEE60725.1| hypothetical protein OsJ_14236 [Oryza sativa Japonica Group]
          Length = 364

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 230/349 (65%), Positives = 264/349 (75%), Gaps = 33/349 (9%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D LI QV  GG+E         +  L AE HF+ F+++F + Y                 
Sbjct: 35  DPLIDQVVGGGEE--------EDAQLDAEAHFASFERRFGRTYPGP-------------- 72

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR---KLRLPKDADQAPILPTNDLP 145
           RRA R   LDP+ATHG+T+FSDLTP EFR  +LGLRR   +  +  +  +APILPT+ LP
Sbjct: 73  RRARR---LDPTATHGVTKFSDLTPGEFRDRFLGLRRPSLEGLVGGEPHEAPILPTDGLP 129

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            DFDWRE GAVGPVKDQGSCGSCWSFST+GALEGA+FLATGKL  LSEQQ+VDCDHECD 
Sbjct: 130 DDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDA 189

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
            E  +CDSGCNGGLM +AF Y +K+GGL  E+DYPY G  R + CKFDKSKI A V NFS
Sbjct: 190 SESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYAG--RENTCKFDKSKIVAQVKNFS 247

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
           V+S++EDQIAANLVK+GPLA+AINA YMQTYIGGVSCP+IC R LDHGVLLVGYGSAGYA
Sbjct: 248 VISVNEDQIAANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYGSAGYA 307

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           PIR KEKPYWIIKNSWGE+WGE GYYKICRG   +N CGVDSMVS+V A
Sbjct: 308 PIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTA 356


>gi|168018894|ref|XP_001761980.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162686697|gb|EDQ73084.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/376 (58%), Positives = 276/376 (73%), Gaps = 12/376 (3%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHH--ESTNNDLLGAEH 58
           M S+ ++L  + ++ F+  ++     D    IR+VTD   + LS+   E   + L+GAE 
Sbjct: 1   MESRGLLLVGIVVLGFAGFAASLPTGDT---IREVTD---DALSNGSVEQFAHALIGAEK 54

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F  F K F K Y S EE++HRF +FK+NL +A +HQ LDP+A+HG+T FSDLT  EF  
Sbjct: 55  RFESFMKDFGKVYHSVEEYEHRFGVFKSNLLKALKHQALDPTASHGVTMFSDLTEEEFTS 114

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            YLGL+R   L   A QAP LPT DLP +FDWREKGAVGPVKDQG CGSCW+FSTTGA+E
Sbjct: 115 KYLGLKRPSVL-SSAPQAPPLPTEDLPPNFDWREKGAVGPVKDQGGCGSCWAFSTTGAVE 173

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           GA+FL +GKLVSLSEQQLVDCDH+CD EE  +CD+GCNGG M +A++Y   AGGL  E D
Sbjct: 174 GAHFLNSGKLVSLSEQQLVDCDHQCDREEADACDAGCNGGFMTNAYQYVEAAGGLELESD 233

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           YPY G D    CKFD +K+A  V+NF+ + +DEDQ+AA L+K+GPLA+ INA +MQTYI 
Sbjct: 234 YPYEGRD--GKCKFDSNKVAVKVSNFTNIPVDEDQVAAYLIKSGPLAIGINAEFMQTYIA 291

Query: 299 GVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR 357
           GVSCP  C++R LDHGVLLVGY   G+AP RL  KPYWIIKNSWG +WG+NGYYKICRG 
Sbjct: 292 GVSCPIFCNKRNLDHGVLLVGYAERGFAPARLAYKPYWIIKNSWGPNWGDNGYYKICRGH 351

Query: 358 NVCGVDSMVSTVAAAV 373
             CG+++MVS V+A+V
Sbjct: 352 GECGLNTMVSAVSASV 367


>gi|168059933|ref|XP_001781954.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162666600|gb|EDQ53250.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 369

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 213/344 (61%), Positives = 261/344 (75%), Gaps = 5/344 (1%)

Query: 31  LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRR 90
           +I+QVTDG   +    E   + LLGAE  F  F K+F K Y + EE++HRF +FK+NL R
Sbjct: 28  VIQQVTDG-VRVDGSVEQFAHALLGAEKQFESFIKEFGKVYHTVEEYEHRFKVFKSNLLR 86

Query: 91  AARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDW 150
           A +HQ LDP+A+HG+T FSDLT  EF   YLGL+R   L   A  A  LPT DLP  FDW
Sbjct: 87  ALKHQALDPTASHGVTMFSDLTEEEFATQYLGLKRPSAL-STAPTAEPLPTGDLPPSFDW 145

Query: 151 REKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGS 210
           REKGAVGPVK+QGSCGSCW+FSTTGA+EGA+FLATGKL+SLSEQQLVDCDH+CDPEE  +
Sbjct: 146 REKGAVGPVKNQGSCGSCWAFSTTGAVEGAHFLATGKLLSLSEQQLVDCDHQCDPEEAQA 205

Query: 211 CDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLD 270
           CD+GC GGLM +A++Y  +AGGL  E DYPY G D    C+F+ +K+AA V+NF+ + +D
Sbjct: 206 CDAGCGGGLMTNAYKYVEEAGGLELESDYPYKGRDG--KCQFNPNKVAAKVSNFTNIPID 263

Query: 271 EDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRL 329
           EDQ+AA L+K+GPLA+ INA +MQTY+ GVSCP  C++R LDHGVLLVGY   G+AP RL
Sbjct: 264 EDQVAAYLIKSGPLAIGINAEFMQTYVAGVSCPIFCNKRNLDHGVLLVGYAEHGFAPARL 323

Query: 330 KEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAAV 373
             KPYWIIKNSWG  WG+ GYYKICRG   CG+++MVS VAA V
Sbjct: 324 AYKPYWIIKNSWGPMWGDKGYYKICRGHGECGLNTMVSAVAANV 367


>gi|125547724|gb|EAY93546.1| hypothetical protein OsI_15336 [Oryza sativa Indica Group]
          Length = 348

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 212/288 (73%), Positives = 239/288 (82%), Gaps = 8/288 (2%)

Query: 90  RAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR---KLRLPKDADQAPILPTNDLPA 146
           R  R  +LDP+ATHG+T+FSDLTP EFR   LGLRR   +  +  +  +APILPT+ LP 
Sbjct: 55  RELRAARLDPTATHGVTKFSDLTPGEFRDRLLGLRRPSLEGLVGGEPHEAPILPTDGLPD 114

Query: 147 DFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPE 206
           DFDWRE GAVGPVKDQGSCGSCWSFST+GALEGA+FLATGKL  LSEQQ+VDCDHECD  
Sbjct: 115 DFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCDHECDAS 174

Query: 207 EPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV 266
           E  +CDSGCNGGLM +AF Y +K+GGL  E+DYPY G  R + CKFDKSKI A V NFSV
Sbjct: 175 ESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYAG--RENTCKFDKSKIVAQVKNFSV 232

Query: 267 VSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAP 326
           +S++EDQIAANLVK+GPLA+AINA YMQTYIGGVSCP+IC R LDHGVLLVGYGSAGYAP
Sbjct: 233 ISVNEDQIAANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYGSAGYAP 292

Query: 327 IRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           IR KEKPYWIIKNSWGE+WGE GYYKICRG   +N CGVDSMVS+V A
Sbjct: 293 IRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTA 340


>gi|240255643|ref|NP_567010.5| Papain family cysteine protease [Arabidopsis thaliana]
 gi|17979125|gb|AAL49820.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332645795|gb|AEE79316.1| Papain family cysteine protease [Arabidopsis thaliana]
          Length = 367

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 209/378 (55%), Positives = 269/378 (71%), Gaps = 18/378 (4%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGA--EH 58
           M +K +   +  +++F  V +       D  IRQVT       + +     +LLG   E 
Sbjct: 1   MVAKALAQLITCIILFCHVVASV----EDLTIRQVT-------ADNRRIRPNLLGTHTES 49

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F LF   + K Y+++EE+ HR  IF  N+ +AA HQ +DPSA HG+TQFSDLT  EF+R
Sbjct: 50  KFRLFMSDYGKNYSTREEYIHRLGIFAKNVLKAAEHQMMDPSAVHGVTQFSDLTEEEFKR 109

Query: 119 TYLGLRR--KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
            Y G+      R      +AP++  + LP DFDWREKG V  VK+QG+CGSCW+FSTTGA
Sbjct: 110 MYTGVADVGGSRGGTVGAEAPMVEVDGLPEDFDWREKGGVTEVKNQGACGSCWAFSTTGA 169

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
            EGA+F++TGKL+SLSEQQLVDCD  CDP++  +CD+GC GGLM +A+EY ++AGGL  E
Sbjct: 170 AEGAHFVSTGKLLSLSEQQLVDCDQACDPKDKKACDNGCGGGLMTNAYEYLMEAGGLEEE 229

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTY 296
             YPYTG  RGH CKFD  K+A  V NF+ + LDE+QIAANLV++GPLAV +NAV+MQTY
Sbjct: 230 RSYPYTG-KRGH-CKFDPEKVAVRVLNFTTIPLDENQIAANLVRHGPLAVGLNAVFMQTY 287

Query: 297 IGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           IGGVSCP ICS+R ++HGVLLVGYGS G++ +RL  KPYWIIKNSWG+ WGENGYYK+CR
Sbjct: 288 IGGVSCPLICSKRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCR 347

Query: 356 GRNVCGVDSMVSTVAAAV 373
           G ++CG++SMVS VA  V
Sbjct: 348 GHDICGINSMVSAVATQV 365


>gi|357473731|ref|XP_003607150.1| Cysteine proteinase [Medicago truncatula]
 gi|355508205|gb|AES89347.1| Cysteine proteinase [Medicago truncatula]
          Length = 326

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 220/372 (59%), Positives = 262/372 (70%), Gaps = 56/372 (15%)

Query: 3   SKTVVLFLVSLVVFSA-VSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFS 61
           +KT++LF V  + FS  ++  T  D  D +I+QV D G               GAEH F+
Sbjct: 4   NKTLMLFSVLFLFFSVDLAFSTPNDREDPIIQQVVDKG---------------GAEHQFN 48

Query: 62  LFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL 121
            FK++F K Y+S++EHD+RF +FK+NL RA RH  +DPSATHG+T+FSDLTP EFR + L
Sbjct: 49  EFKQRFGKVYSSKDEHDYRFNVFKSNLHRAKRHVIMDPSATHGVTRFSDLTPREFRNSIL 108

Query: 122 GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
           GL+  + LP+ A  APIL + +LP DFDWREKGAV PV++QG CGS WSFST GALEGAN
Sbjct: 109 GLK-GVGLPRHAKAAPILSSENLPRDFDWREKGAVTPVRNQGFCGSSWSFSTIGALEGAN 167

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
           FL+TG+LVSLS+QQ VDCDH                       EY  K+GGLMR EDY Y
Sbjct: 168 FLSTGELVSLSDQQHVDCDH-----------------------EYIKKSGGLMRVEDYTY 204

Query: 242 TGTDRGHACKFDKSKIAASV-ANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV 300
                       K+ IA SV ANFS V +D+DQIAANL+K GPLAVAINA YMQTY+GGV
Sbjct: 205 Y-----------KTNIARSVAANFSSVLVDDDQIAANLLKYGPLAVAINAAYMQTYVGGV 253

Query: 301 SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
           SCPY C+RRLDHGVLLVGYGS  Y     KEKPYWI+K+SWGE+WGENGYYKICRGRN+C
Sbjct: 254 SCPYTCTRRLDHGVLLVGYGSGAYT----KEKPYWIVKSSWGETWGENGYYKICRGRNIC 309

Query: 361 GVDSMVSTVAAA 372
           GVDSMVSTVAAA
Sbjct: 310 GVDSMVSTVAAA 321


>gi|297816790|ref|XP_002876278.1| hypothetical protein ARALYDRAFT_485911 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322116|gb|EFH52537.1| hypothetical protein ARALYDRAFT_485911 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 368

 Score =  423 bits (1087), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 210/379 (55%), Positives = 267/379 (70%), Gaps = 19/379 (5%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGA--EH 58
           M +K +   +  ++ F  V +       D  IRQVT   DE          +LLG   E 
Sbjct: 1   MVAKALAQLITCIIFFCHVVASV----EDLTIRQVT--ADE-----RRVRPNLLGTHTES 49

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F +F   + K Y+++EE+ HR  IF  N+ +AA HQ +DP+A HG+TQFSDLT  EF+R
Sbjct: 50  KFRVFMSDYGKNYSTREEYIHRLGIFAKNVLKAAEHQMMDPTAVHGVTQFSDLTEEEFKR 109

Query: 119 TYLGLRR--KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
            Y G+      R      +AP++  + LP DFDWREKG V  VK+QG+CGSCW+FSTTGA
Sbjct: 110 MYTGVADVGGSRGHAVGAEAPMVEVDGLPEDFDWREKGGVTEVKNQGACGSCWAFSTTGA 169

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHE-CDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
            EGA+F++TGKL+SLSEQQLVDCD   CDP++  +CD+GC GGLM +A+EY ++AGGL  
Sbjct: 170 AEGAHFVSTGKLLSLSEQQLVDCDQAVCDPKDKKACDNGCGGGLMTNAYEYLMEAGGLEE 229

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           E  YPYTG  RGH CKFD  K+A  V NF+ + LDEDQIAANLV+ GPLAV +NAV+MQT
Sbjct: 230 ERSYPYTG-KRGH-CKFDPEKVAVRVVNFTTIPLDEDQIAANLVRQGPLAVGLNAVFMQT 287

Query: 296 YIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           YIGGVSCP ICS+R ++HGVLLVGYGS G++ +RL  KPYWIIKNSWG+ WGENGYYK+C
Sbjct: 288 YIGGVSCPLICSKRKVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLC 347

Query: 355 RGRNVCGVDSMVSTVAAAV 373
           RG ++CG++SMVS VA  V
Sbjct: 348 RGHDICGINSMVSAVATQV 366


>gi|52546912|gb|AAU81589.1| cysteine proteinase [Petunia x hybrida]
          Length = 257

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 198/239 (82%), Positives = 215/239 (89%), Gaps = 2/239 (0%)

Query: 134 DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSE 193
           D+APILPT+DLP DFDWREKGAV  VK+QGSCGSCWSFSTTGA+EGA+FLATG+LVSLSE
Sbjct: 14  DKAPILPTSDLPDDFDWREKGAVTGVKNQGSCGSCWSFSTTGAVEGAHFLATGELVSLSE 73

Query: 194 QQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD 253
           QQLVDCDHECD E+   CD+GC GGLM +AFEYTLKAGGL RE+DYPYTG D    C FD
Sbjct: 74  QQLVDCDHECDAEQQNECDAGCGGGLMTTAFEYTLKAGGLQREKDYPYTGRDG--KCHFD 131

Query: 254 KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHG 313
           KSKIAASVANFSVV LDEDQIAANLVK+GPLAV INA +MQTY+GGVSCP IC +R DHG
Sbjct: 132 KSKIAASVANFSVVGLDEDQIAANLVKHGPLAVGINAAWMQTYVGGVSCPLICFKRQDHG 191

Query: 314 VLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           VLLVGYGSAG+APIRLKEKPYWIIKNSWGESWGE GYYKICRGRN+CGVD+MVSTV AA
Sbjct: 192 VLLVGYGSAGFAPIRLKEKPYWIIKNSWGESWGEQGYYKICRGRNICGVDAMVSTVTAA 250


>gi|357473651|ref|XP_003607110.1| Cysteine proteinase [Medicago truncatula]
 gi|355508165|gb|AES89307.1| Cysteine proteinase [Medicago truncatula]
          Length = 331

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 211/371 (56%), Positives = 259/371 (69%), Gaps = 50/371 (13%)

Query: 3   SKTVVLFLVSLVVFSAVSSGTLIDDV-DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFS 61
           ++T +LF V  + FS   + ++  D  D +I+QV D G               GAE+ F+
Sbjct: 5   NQTFMLFSVLFLFFSVDLAFSMPKDREDPIIQQVVDKG---------------GAEYQFN 49

Query: 62  LFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL 121
            FK++F K Y+S++EHD+RF +FK+NL RA RH  +DPSATHG+T+FSDLTP EFR + L
Sbjct: 50  EFKQRFGKVYSSKDEHDYRFNVFKSNLHRAKRHGIMDPSATHGVTRFSDLTPREFRNSIL 109

Query: 122 GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
           GL+  + LP+ A  APIL T +LP DFDWREKGAV PV++QG CGS WSFST GALEGA+
Sbjct: 110 GLK-GVGLPRHAKAAPILSTENLPRDFDWREKGAVTPVRNQGFCGSSWSFSTIGALEGAH 168

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
           FL++G+LVSLSEQ  VDCDHE                       Y  K GGLMR EDY Y
Sbjct: 169 FLSSGELVSLSEQHHVDCDHE-----------------------YIQKYGGLMRVEDYTY 205

Query: 242 TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVS 301
             T+   +            ANFS +S+D++QI ANLVK+GPLA AINAVYMQTY+GG+S
Sbjct: 206 YKTNTARSV----------AANFSSISVDDNQITANLVKHGPLAAAINAVYMQTYVGGIS 255

Query: 302 CPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 361
           CPYIC+RRLD GVLLVGYGS   A ++ KEKPYWI+KNSWGE+WGENGYYKICRGRN+CG
Sbjct: 256 CPYICTRRLDLGVLLVGYGSGAGADMKEKEKPYWIVKNSWGETWGENGYYKICRGRNICG 315

Query: 362 VDSMVSTVAAA 372
           VDSMVSTVAAA
Sbjct: 316 VDSMVSTVAAA 326


>gi|351726954|ref|NP_001236888.1| cysteine proteinase precursor [Glycine max]
 gi|479060|emb|CAA83673.1| cysteine proteinase [Glycine max]
 gi|300507422|gb|ADK24076.1| cysteine proteinase [Glycine max]
 gi|300507425|gb|ADK24077.1| cysteine proteinase [Glycine max]
 gi|1096153|prf||2111244A Cys protease
          Length = 380

 Score =  416 bits (1069), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/365 (55%), Positives = 262/365 (71%), Gaps = 20/365 (5%)

Query: 6   VVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           V LFL +L + +A  S T+ D    + R++  G           +N+LL  E  F +F +
Sbjct: 15  VSLFLCALTLSAAHGSTTVQD----IARKLKLG-----------DNELLRTEKKFKVFME 59

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
            + ++Y+++EE+  R  IF  N+ RAA HQ LDP+A HG+TQFSDLT  EF + Y G+  
Sbjct: 60  NYGRSYSTEEEYLRRLGIFAQNMVRAAEHQALDPTAVHGVTQFSDLTEDEFEKLYTGVNG 119

Query: 126 KLRLPKDADQ--APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
                 +A    AP L  + LP +FDWREKGAV  VK QG CGSCW+FSTTG++EGANFL
Sbjct: 120 GFPSSNNAAGGIAPPLEVDGLPENFDWREKGAVTEVKLQGRCGSCWAFSTTGSIEGANFL 179

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
           ATGKLVSLSEQQL+DCD++CD  E  SCD+GCNGGLM +A+ Y L++GGL  E  YPYTG
Sbjct: 180 ATGKLVSLSEQQLLDCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPYTG 239

Query: 244 TDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP 303
            +RG  CKFD  KIA  + NF+ +  DE+QIAA LVKNGPLA+ +NA++MQTYIGGVSCP
Sbjct: 240 -ERGE-CKFDPEKIAVKITNFTNIPADENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSCP 297

Query: 304 YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGV 362
            ICS +RL+HGVLLVGYG+ G++ +RL  KPYWIIKNSWGE WGE+GYYK+CRG  +CG+
Sbjct: 298 LICSKKRLNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGEKWGEDGYYKLCRGHGMCGI 357

Query: 363 DSMVS 367
           ++MVS
Sbjct: 358 NTMVS 362


>gi|4678299|emb|CAB41090.1| cysteine proteinase precursor-like protein [Arabidopsis thaliana]
          Length = 363

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 206/378 (54%), Positives = 265/378 (70%), Gaps = 22/378 (5%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGA--EH 58
           M +K +   +  +++F  V +       D  IRQVT       + +     +LLG   E 
Sbjct: 1   MVAKALAQLITCIILFCHVVASV----EDLTIRQVT-------ADNRRIRPNLLGTHTES 49

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F LF   + K Y+++EE+ HR  IF  N+ +AA HQ +DPSA HG+TQFSDLT  EF+R
Sbjct: 50  KFRLFMSDYGKNYSTREEYIHRLGIFAKNVLKAAEHQMMDPSAVHGVTQFSDLTEEEFKR 109

Query: 119 TYLGLRR--KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
            Y G+      R      +AP++  + LP DFDWREKG V  VK+QG+CGSCW+FSTTGA
Sbjct: 110 MYTGVADVGGSRGGTVGAEAPMVEVDGLPEDFDWREKGGVTEVKNQGACGSCWAFSTTGA 169

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
            EGA+F++TGKL+SLSEQQLVDCD      +  +CD+GC GGLM +A+EY ++AGGL  E
Sbjct: 170 AEGAHFVSTGKLLSLSEQQLVDCDQA----DKKACDNGCGGGLMTNAYEYLMEAGGLEEE 225

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTY 296
             YPYTG  RGH CKFD  K+A  V NF+ + LDE+QIAANLV++GPLAV +NAV+MQTY
Sbjct: 226 RSYPYTG-KRGH-CKFDPEKVAVRVLNFTTIPLDENQIAANLVRHGPLAVGLNAVFMQTY 283

Query: 297 IGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           IGGVSCP ICS+R ++HGVLLVGYGS G++ +RL  KPYWIIKNSWG+ WGENGYYK+CR
Sbjct: 284 IGGVSCPLICSKRNVNHGVLLVGYGSKGFSILRLSNKPYWIIKNSWGKKWGENGYYKLCR 343

Query: 356 GRNVCGVDSMVSTVAAAV 373
           G ++CG++SMVS VA  V
Sbjct: 344 GHDICGINSMVSAVATQV 361


>gi|356576257|ref|XP_003556249.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase 15A-like
           [Glycine max]
          Length = 374

 Score =  412 bits (1060), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/368 (54%), Positives = 259/368 (70%), Gaps = 21/368 (5%)

Query: 6   VVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           V LFL +L + SA  S T+ D    + R++  G           +N+LL  E  F +F +
Sbjct: 15  VSLFLFALTLSSAHESTTVHD----IARKLKVG-----------DNELLRTEKKFKVFME 59

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
            + ++Y+++EE+  R  IF  N+ RAA HQ LDP+A HG+TQFSDLT  EF + Y G   
Sbjct: 60  NYGRSYSTREEYLRRLGIFSQNMLRAAEHQALDPTAVHGVTQFSDLTEVEFEKLYTGXPS 119

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
                     AP L    LP +FDWREKGAV  VK QG CGSCW+FSTTG++EGANFLAT
Sbjct: 120 T---NTAGGVAPPLEVEGLPENFDWREKGAVTEVKIQGRCGSCWAFSTTGSIEGANFLAT 176

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           GKLVSLSEQQL+DCD++C+  E  SCD+GCNGGLM +A+ Y L++GGL  E  YPYTG +
Sbjct: 177 GKLVSLSEQQLLDCDNKCEITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPYTG-E 235

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYI 305
           RG  CKFD  KI   + NF+ + +DE+QIAA LVKNGPLA+ +NA++MQTYIGGVSCP I
Sbjct: 236 RGE-CKFDPEKITVRITNFTNIPVDENQIAAYLVKNGPLAMGVNAIFMQTYIGGVSCPLI 294

Query: 306 CS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDS 364
           CS +RL+HGVLLVGYG+ G++ +RL  KPYWIIKNSWG+ WGE+GYYK+CRG  +CG+++
Sbjct: 295 CSKKRLNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGKKWGEDGYYKLCRGHGMCGINT 354

Query: 365 MVSTVAAA 372
           MVS    A
Sbjct: 355 MVSAAMVA 362


>gi|351629613|gb|AEQ54770.1| cysteine proteinase CP1 [Coffea canephora]
          Length = 397

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 210/383 (54%), Positives = 267/383 (69%), Gaps = 26/383 (6%)

Query: 11  VSLVVFSAVSSGTLIDDVDQ------LIRQVTDGGDEILSHH---ESTNNDLLGA--EHH 59
           ++L+  + +SS T   ++        +IRQVTD       HH    S N+ LLG   E H
Sbjct: 16  ITLLSCALISSTTFQHEIQYRVQDPLMIRQVTDNHHH--RHHPGRSSANHRLLGTTTEVH 73

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  F +++ K Y++ EE+ HR  IF  NL +AA HQ +DPSA HG+TQFSDLT  EF  T
Sbjct: 74  FKSFVEEYEKTYSTHEEYVHRLGIFAKNLIKAAEHQAMDPSAIHGVTQFSDLTEEEFEAT 133

Query: 120 YLGLRR------KLRLPKD-ADQAP---ILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           Y+GL+         +L KD  D++    ++  +DLP  FDWREKGAV  VK QG CGSCW
Sbjct: 134 YMGLKGGAGVGGTTQLGKDDGDESAAEVMMDVSDLPESFDWREKGAVTEVKTQGRCGSCW 193

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FSTTGA+EGANF+ATGKL+SLSEQQLVDCDH CD +E   CD GC+GGLM +AF Y ++
Sbjct: 194 AFSTTGAIEGANFIATGKLLSLSEQQLVDCDHMCDLKEKDDCDDGCSGGLMTTAFNYLIE 253

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
           AGG+  E  YPYTG  RG  CKF+  K+A  V NF+ +  DE QIAAN+V NGPLA+ +N
Sbjct: 254 AGGIEEEVTYPYTG-KRGE-CKFNPEKVAVKVRNFAKIPEDESQIAANVVHNGPLAIGLN 311

Query: 290 AVYMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           AV+MQTYIGGVSCP IC  +R++HGVLLVGYGS G++ +RL  KPYWIIKNSWG+ WGE+
Sbjct: 312 AVFMQTYIGGVSCPLICDKKRINHGVLLVGYGSRGFSILRLGYKPYWIIKNSWGKRWGEH 371

Query: 349 GYYKICRGRNVCGVDSMVSTVAA 371
           GYY++CRG N+CG+ +MVS V  
Sbjct: 372 GYYRLCRGHNMCGMSTMVSAVVT 394


>gi|2414683|emb|CAB16316.1| cysteine proteinase precursor [Vicia sativa]
          Length = 379

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 200/364 (54%), Positives = 257/364 (70%), Gaps = 19/364 (5%)

Query: 6   VVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           V +FL +L + S++   TLI DV + +              E  +NDLL  E  F LF K
Sbjct: 15  VAIFLCALTLSSSLHHETLIQDVARKL--------------ELKDNDLLTTEKKFKLFMK 60

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
            ++K Y++ EE+  R  IF  N+ +AA HQ LDP+A HG+TQFSDL+  EF R Y G + 
Sbjct: 61  DYSKKYSTTEEYLLRLGIFAKNMVKAAEHQALDPTAIHGVTQFSDLSEEEFERFYTGFKG 120

Query: 126 KLRLPKDADQ-APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
                  A   AP L     P +FDWREKGAV  +K QG CGSCW+F+TTG++EGANFLA
Sbjct: 121 GFPSSNAAGGVAPPLDVKGFPENFDWREKGAVTGIKTQGKCGSCWAFTTTGSIEGANFLA 180

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TGKLVSLSEQQLVDCD++CD  +  SCD+GCNGGLM +A++Y ++AGGL  E  YPYTG 
Sbjct: 181 TGKLVSLSEQQLVDCDNKCDITKT-SCDNGCNGGLMTTAYDYLMEAGGLEEETSYPYTGA 239

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY 304
                CKFD +K+A  V+NF+ +  DE+QIAA LV +GPLA+A+NAV+MQTY+GGVSCP 
Sbjct: 240 Q--GECKFDPNKVAVRVSNFTNIPADENQIAAYLVNHGPLAIAVNAVFMQTYVGGVSCPL 297

Query: 305 ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVD 363
           ICS RRL+HGVLLVGY + G++ +RL++KPYW IKNSWGE WGE GYYK+CRG  +CG++
Sbjct: 298 ICSKRRLNHGVLLVGYNAEGFSILRLRKKPYWTIKNSWGEQWGEKGYYKLCRGHGMCGMN 357

Query: 364 SMVS 367
           +MVS
Sbjct: 358 TMVS 361


>gi|53748485|emb|CAH59428.1| cysteine protease 2 [Plantago major]
          Length = 245

 Score =  411 bits (1056), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 195/242 (80%), Positives = 218/242 (90%), Gaps = 4/242 (1%)

Query: 132 DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSL 191
           D ++AP LPT++LP +FDWREKGAV  VK+QGSCGSCWSFSTTGALEGAN+LATG+L+SL
Sbjct: 2   DENKAPKLPTSNLPEEFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGANYLATGELISL 61

Query: 192 SEQQLVDCDHECDPEEPG-SCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHAC 250
           SEQQLVDCDHECDPEE   SCD+GCNGGLMN+AFEY LKAGGL +E+DYPYTG D    C
Sbjct: 62  SEQQLVDCDHECDPEEGADSCDAGCNGGLMNNAFEYALKAGGLQKEKDYPYTGKD--GTC 119

Query: 251 KFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRL 310
           KFDK+KIAASV NFSVVS+DEDQIAANLVK GPLAV INA +MQTYIGGVSCPYIC + L
Sbjct: 120 KFDKTKIAASVHNFSVVSIDEDQIAANLVKYGPLAVGINAAWMQTYIGGVSCPYICGKSL 179

Query: 311 DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVA 370
           DHGVL+VGYG+ GYAP+RLK KPYWIIKNSWGESWGE+GYYKICRGRNVCGV+SMVS+V 
Sbjct: 180 DHGVLIVGYGT-GYAPVRLKNKPYWIIKNSWGESWGESGYYKICRGRNVCGVESMVSSVT 238

Query: 371 AA 372
           AA
Sbjct: 239 AA 240


>gi|224113123|ref|XP_002316398.1| predicted protein [Populus trichocarpa]
 gi|222865438|gb|EEF02569.1| predicted protein [Populus trichocarpa]
          Length = 327

 Score =  408 bits (1049), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 189/323 (58%), Positives = 235/323 (72%), Gaps = 3/323 (0%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           +LLG E  F +F K+ NK YA++EE+ HRF IF  NL RA  HQ LDP+A HG+T F DL
Sbjct: 6   NLLGTEEKFKMFIKEHNKEYATREEYVHRFGIFGKNLIRAVEHQALDPTAIHGVTPFMDL 65

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           T  EF R Y G+     +P +      +  + LP  FDWREKGAV  VK QGSCGSCW+F
Sbjct: 66  TEEEFERMYAGVLGGGTVPVEKGSVSFMDASGLPDSFDWREKGAVTDVKIQGSCGSCWAF 125

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           STTG++EGANF+ATGKL++LSEQQLVDCD  CD  +  SCD GC GGLM +A+ Y ++AG
Sbjct: 126 STTGSVEGANFIATGKLLNLSEQQLVDCDRVCDKTDKASCDDGCGGGLMTNAYRYLIEAG 185

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  E  YPYTG  +   CKFD  KIA  VANF+ +++DE+QIAANLV +GPLA+ +NA+
Sbjct: 186 GLQEESSYPYTG--KSGECKFDPEKIAVKVANFTSIAVDENQIAANLVHHGPLAIGLNAI 243

Query: 292 YMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           +MQTYIGGVSCP IC ++ L+HGVLLVGYG+ GY+ +R   KPYWIIKNSWG  WGE GY
Sbjct: 244 FMQTYIGGVSCPLICGKKWLNHGVLLVGYGARGYSILRFGYKPYWIIKNSWGNHWGEKGY 303

Query: 351 YKICRGRNVCGVDSMVSTVAAAV 373
           Y++CRG  +CG++ MVS V   V
Sbjct: 304 YRLCRGHGMCGMNKMVSAVVTKV 326


>gi|449449489|ref|XP_004142497.1| PREDICTED: cysteine proteinase 15A-like [Cucumis sativus]
          Length = 406

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/363 (53%), Positives = 260/363 (71%), Gaps = 16/363 (4%)

Query: 14  VVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYAS 73
           ++ SA+ S T +    + +RQVTDG        E  NN   G+E  F +F +K+ K+Y +
Sbjct: 51  LLISAIPSATALRRDPEFLRQVTDG--------EIFNNLPAGSERKFVMFMEKYGKSYPT 102

Query: 74  QEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR---LP 130
           ++E+ HRF IF  NL RAA HQ LDP+A HG+TQFSDL+  EF R ++G+R       LP
Sbjct: 103 RKEYLHRFGIFVKNLIRAAEHQALDPTAVHGVTQFSDLSEEEFERMFMGVRGGAGGEGLP 162

Query: 131 K--DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKL 188
           +   A +        LP  FDWR+KGAV  VK QG+CGSCW+FST GA+EGANF+ATG L
Sbjct: 163 EMNQAVEVTAEEVKGLPERFDWRDKGAVTEVKMQGTCGSCWAFSTCGAVEGANFIATGNL 222

Query: 189 VSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGH 248
           ++LSEQQLVDCDH CDP +  +C++GCNGGLM +A++Y +++GGL  E  YPYTG  R  
Sbjct: 223 LNLSEQQLVDCDHTCDPTDKTACNNGCNGGLMTNAYKYLIQSGGLEEESSYPYTG--RSG 280

Query: 249 ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR 308
            C F   KIA  V+NF+ + +DE+QIAA+LV++GPLAV +NAV+MQTYIGGVSCP IC +
Sbjct: 281 QCNFQSDKIAVKVSNFTTIPIDENQIAAHLVRSGPLAVGLNAVFMQTYIGGVSCPLICGK 340

Query: 309 R-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
           R ++HGVL+VGYG  G++ +R ++ PYW+IKNSWGE WGE+GYY++CRG  +CG+++MVS
Sbjct: 341 RFVNHGVLMVGYGDEGFSILRFRKLPYWVIKNSWGERWGEHGYYRLCRGHGMCGINTMVS 400

Query: 368 TVA 370
            V 
Sbjct: 401 AVV 403


>gi|449487301|ref|XP_004157559.1| PREDICTED: cysteine proteinase 15A-like [Cucumis sativus]
          Length = 406

 Score =  407 bits (1046), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 193/363 (53%), Positives = 260/363 (71%), Gaps = 16/363 (4%)

Query: 14  VVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYAS 73
           ++ SA+ S T +    + +RQVTDG        E  NN   G+E  F +F +K+ K+Y +
Sbjct: 51  LLISAIPSATALRRDPEFLRQVTDG--------EIFNNLPAGSERKFVMFMEKYGKSYPT 102

Query: 74  QEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR---LP 130
           ++E+ HRF IF  NL RAA HQ LDP+A HG+TQFSDL+  EF R ++G+R       LP
Sbjct: 103 RKEYLHRFGIFVKNLIRAAEHQALDPTAVHGVTQFSDLSEEEFERMFMGVRGGAGGEGLP 162

Query: 131 K--DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKL 188
           +   A +        LP  FDWR+KGAV  VK QG+CGSCW+FST GA+EGANF+ATG L
Sbjct: 163 EMNQAVEVTAEEVKGLPERFDWRDKGAVTEVKMQGTCGSCWAFSTCGAVEGANFIATGNL 222

Query: 189 VSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGH 248
           ++LSEQQLVDCDH CDP +  +C++GCNGGLM +A++Y +++GGL  E  YPYTG  R  
Sbjct: 223 LNLSEQQLVDCDHTCDPTDKTACNNGCNGGLMTNAYKYLIQSGGLEEESSYPYTG--RSG 280

Query: 249 ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR 308
            C F   KIA  V+NF+ + +DE+QIAA+LV++GPLAV +NAV+MQTYIGGVSCP IC +
Sbjct: 281 QCNFQSDKIAVKVSNFTTIPIDENQIAAHLVRSGPLAVGLNAVFMQTYIGGVSCPLICGK 340

Query: 309 R-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
           R ++HGVL+VGYG  G++ +R ++ PYW+IKNSWGE WGE+GYY++CRG  +CG+++MVS
Sbjct: 341 RFVNHGVLMVGYGDEGFSILRFRKLPYWVIKNSWGERWGEHGYYRLCRGHGMCGINTMVS 400

Query: 368 TVA 370
            V 
Sbjct: 401 AVV 403


>gi|225448924|ref|XP_002266821.1| PREDICTED: cysteine proteinase 15A-like [Vitis vinifera]
          Length = 375

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 190/344 (55%), Positives = 249/344 (72%), Gaps = 8/344 (2%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D  I QVTDG     SH +   + +LG E  F +F +K+ K Y+S+EE+ HR  IF  N+
Sbjct: 34  DPNIVQVTDG----HSHRKFGVDGVLGTEKEFRMFMEKYGKEYSSREEYVHRLGIFAKNM 89

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKD-ADQAPILPTNDLPAD 147
            RAA HQ LDP+A HG+T FSDL+  EF R + G+  +  +    A+ A  L  + LP  
Sbjct: 90  VRAAEHQALDPTALHGVTPFSDLSEEEFERMFTGVVGRPHMKGGVAETAAALEVDGLPES 149

Query: 148 FDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEE 207
           FDWREKGAV  VK QG+CGSCW+FSTTGA+EGA+F++T KL++LSEQQLVDCDH CD  +
Sbjct: 150 FDWREKGAVTEVKMQGTCGSCWAFSTTGAVEGAHFISTKKLLTLSEQQLVDCDHMCDIRD 209

Query: 208 PGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVV 267
             +CDSGC GGLM +A++Y ++AGGL  E  YPYTG  +   CKF   ++A  V NF+ V
Sbjct: 210 KTACDSGCEGGLMTNAYKYLIEAGGLEEESSYPYTG--KHGECKFKPDRVAVRVVNFTEV 267

Query: 268 SLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAP 326
            ++E+QIAANLV +GPLAV +NA++MQTYIGGVSCP IC +R ++HGVLLVGYG+ GY+ 
Sbjct: 268 PINENQIAANLVCHGPLAVGLNAIFMQTYIGGVSCPLICPKRWINHGVLLVGYGAKGYSI 327

Query: 327 IRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVA 370
           +R   KPYWIIKNSWG+ WGE+GYY++CRG  +CG+++MVS V 
Sbjct: 328 LRFGYKPYWIIKNSWGKRWGEHGYYRLCRGHGMCGMNTMVSAVV 371


>gi|2511695|emb|CAB17077.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 377

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 194/360 (53%), Positives = 254/360 (70%), Gaps = 15/360 (4%)

Query: 11  VSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKA 70
           +SLV+F+   S           RQ T    +I    +  +N LL  E  F++F + + K 
Sbjct: 15  ISLVLFALTLSSA---------RQTTV--HDIAKKLKLQDNQLLRTEKKFNVFMENYGKK 63

Query: 71  YASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLP 130
           Y+++EE+  R  IF  N+ RA  +Q LDP+A HG+TQFSDLT  EF+R Y G+       
Sbjct: 64  YSTREEYLQRLEIFAGNMLRAPENQALDPTAIHGVTQFSDLTEDEFQRHYTGVNGGFPWN 123

Query: 131 KDA-DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLV 189
               D AP L  + LP DFDWREKGAV  VK QG CGSCW+FSTTG++EGANF+ATGKL+
Sbjct: 124 NGVRDVAPPLKVDGLPEDFDWREKGAVTEVKMQGKCGSCWAFSTTGSIEGANFIATGKLL 183

Query: 190 SLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHA 249
           +LSEQQLVDCD +CD  E  +CD+GC GGLM +A++Y L++GGL  E  YPYTG  +G  
Sbjct: 184 NLSEQQLVDCDSQCDITESTTCDNGCMGGLMTNAYKYLLQSGGLEEESSYPYTGA-KGE- 241

Query: 250 CKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR 309
           CKFD  K+A  + NF+ + +DE+QIAA LVK+GPLAV +NA++MQTYIGGVSCP ICS++
Sbjct: 242 CKFDPGKVAVRITNFTNIPVDENQIAAYLVKHGPLAVGLNAIFMQTYIGGVSCPLICSKK 301

Query: 310 -LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
            L+HGVLLVGY + G++ +RL  KPYWIIKNSWG+ WG +GYYK+CRG  +CG+++MVST
Sbjct: 302 WLNHGVLLVGYRAKGFSILRLGNKPYWIIKNSWGKRWGVDGYYKLCRGHGMCGMNTMVST 361


>gi|5679322|gb|AAD46920.1|AF167986_1 putative cysteine proteinase GmPM33 [Glycine max]
          Length = 363

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 197/367 (53%), Positives = 254/367 (69%), Gaps = 41/367 (11%)

Query: 6   VVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           V LFL +L + +A  S T+ D    + R++  G           +N+LL  E  F +F +
Sbjct: 15  VSLFLCALTLSAAHGSTTVQD----IARKLKLG-----------DNELLRTEKKFKVFME 59

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
            + ++Y+++EE+  R  IF  N+ RAA HQ LDP+A HG+TQFS                
Sbjct: 60  NYGRSYSTEEEYLRRLGIFAQNMVRAAEHQALDPTAVHGVTQFS---------------- 103

Query: 126 KLRLPKDADQA----PILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
              LP   + A    P L  + LP +FDWREKGAV  VK QG CGSCW+FSTTG++EGAN
Sbjct: 104 ---LPVSNNAAGGIAPPLEVDGLPENFDWREKGAVTEVKLQGRCGSCWAFSTTGSIEGAN 160

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
           FLATGKLVSLS+QQL+DCD++CD  E  SCD+GCNGGLM +A+ Y L++GGL  E  YPY
Sbjct: 161 FLATGKLVSLSDQQLLDCDNKCDITEKTSCDNGCNGGLMTNAYNYLLESGGLEEESSYPY 220

Query: 242 TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVS 301
           TG +RG  CKFD  KIA  + NF+ +  DE+QIAA LVKNGPLA+ +NA++MQTYIGGVS
Sbjct: 221 TG-ERGE-CKFDPEKIAVKITNFTNIPADENQIAAYLVKNGPLAMGVNAIFMQTYIGGVS 278

Query: 302 CPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
           CP ICS +RL+HGVLLVGYG+ G++ +RL  KPYWIIKNSWGE WGE+GYYK+CRG  +C
Sbjct: 279 CPLICSKKRLNHGVLLVGYGAKGFSILRLGNKPYWIIKNSWGEKWGEDGYYKLCRGHGMC 338

Query: 361 GVDSMVS 367
           G+++MVS
Sbjct: 339 GINTMVS 345


>gi|294462776|gb|ADE76932.1| unknown [Picea sitchensis]
          Length = 403

 Score =  393 bits (1009), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 186/315 (59%), Positives = 232/315 (73%), Gaps = 4/315 (1%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  F  +  K Y++ EE+  R  IF+ NL +AA +Q LDP+A HGIT FSDLT  EF   
Sbjct: 90  FDKFIVEHGKVYSTIEEYVRRLRIFEKNLLKAAENQALDPTAVHGITPFSDLTEYEFESR 149

Query: 120 YLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           Y GL   +  L  +   A ILP +DLPA+FDWREKGAV  VK QG+CGSCW+FSTTG +E
Sbjct: 150 YTGLLGVRQGLVNEKQTAEILPVDDLPANFDWREKGAVTEVKTQGNCGSCWAFSTTGVVE 209

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           GANFLATGKL++LSEQQL+DCDH+CDP    +CD+GC+GGLM +A+ Y ++AGG+   ++
Sbjct: 210 GANFLATGKLLNLSEQQLIDCDHKCDPLNTKACDNGCHGGLMTNAYNYLMEAGGIEEAKN 269

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           YPYTG      CKF+    A    NF+ V+LDE QIAANLVK+GPLAV +NA +MQTYIG
Sbjct: 270 YPYTGVQGD--CKFNPDLAAVKAINFTTVNLDEKQIAANLVKHGPLAVGLNAAFMQTYIG 327

Query: 299 GVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR 357
           GVSCP ICS+R ++HGVLLVGYG  G+A +RL  +PYWIIKNSWG+ WGE+GYYK+CRG 
Sbjct: 328 GVSCPLICSKRFINHGVLLVGYGHKGFALLRLGYRPYWIIKNSWGKRWGEHGYYKLCRGH 387

Query: 358 NVCGVDSMVSTVAAA 372
             CG++ MVS V  A
Sbjct: 388 GECGMNKMVSAVIPA 402


>gi|255585361|ref|XP_002533377.1| cysteine protease, putative [Ricinus communis]
 gi|223526784|gb|EEF29008.1| cysteine protease, putative [Ricinus communis]
          Length = 381

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 195/349 (55%), Positives = 245/349 (70%), Gaps = 11/349 (3%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGA--EHHFSLFKKKFNKAYASQEEHDHRFTIFKA 86
           D  I QVTD     LS     N   LG   E +F +F  K++K Y ++EE+ HR  +F  
Sbjct: 39  DPTILQVTDDPSVTLS-----NRKFLGTNTEENFKMFMIKYDKEYDTREEYMHRLGVFAK 93

Query: 87  NLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP-ILPTNDLP 145
           NL RAA HQ LDP+A HGIT F DLT  EF R Y G+     +  +   A   L T  LP
Sbjct: 94  NLIRAAEHQVLDPTAVHGITPFMDLTEEEFERMYTGVVGGGAVGAEGVTATSFLETAGLP 153

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
           + FDWR+KGAV  VK QG+CGSCW+FSTTGA+EGANF+ATGKL++LSEQQLVDCD  CD 
Sbjct: 154 SSFDWRKKGAVTDVKMQGACGSCWAFSTTGAIEGANFIATGKLLNLSEQQLVDCDRVCDI 213

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
           +E  +CD GC GGLM +A+ Y ++AGGL  E  YPYTG  +   CKFD+ KIA  V NF+
Sbjct: 214 KEKTACDDGCGGGLMTNAYRYLIEAGGLEDEISYPYTG--KPGKCKFDEKKIAVRVVNFT 271

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGY 324
            + +DE+QIAA+LV +GPLA+ +NAV+MQTYIGGVSCP IC ++ ++HGVLLVGYG+ G+
Sbjct: 272 SIPIDENQIAAHLVHHGPLAIGLNAVFMQTYIGGVSCPLICGKKWINHGVLLVGYGAKGF 331

Query: 325 APIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAAV 373
           + +RL  KPYWIIKNSWG+ WGE GYY+IC+G  +CG+D MVS V   V
Sbjct: 332 SILRLGYKPYWIIKNSWGKRWGEEGYYRICKGYGMCGMDRMVSAVVTQV 380


>gi|115457680|ref|NP_001052440.1| Os04g0311400 [Oryza sativa Japonica Group]
 gi|113564011|dbj|BAF14354.1| Os04g0311400, partial [Oryza sativa Japonica Group]
          Length = 384

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 183/234 (78%), Positives = 202/234 (86%), Gaps = 5/234 (2%)

Query: 141 TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD 200
           T+ LP DFDWRE GAVGPVKDQGSCGSCWSFST+GALEGA+FLATGKL  LSEQQ+VDCD
Sbjct: 145 TDGLPDDFDWREHGAVGPVKDQGSCGSCWSFSTSGALEGAHFLATGKLEVLSEQQMVDCD 204

Query: 201 HECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAAS 260
           HECD  E  +CDSGCNGGLM +AF Y +K+GGL  E+DYPY G  R + CKFDKSKI A 
Sbjct: 205 HECDASESRACDSGCNGGLMTTAFSYLMKSGGLQSEKDYPYAG--RENTCKFDKSKIVAQ 262

Query: 261 VANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYG 320
           V NFSV+S++EDQIAANLVK+GPLA+AINA YMQTYIGGVSCP+IC R LDHGVLLVGYG
Sbjct: 263 VKNFSVISVNEDQIAANLVKHGPLAIAINAAYMQTYIGGVSCPFICGRHLDHGVLLVGYG 322

Query: 321 SAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAA 371
           SAGYAPIR KEKPYWIIKNSWGE+WGE GYYKICRG   +N CGVDSMVS+V A
Sbjct: 323 SAGYAPIRFKEKPYWIIKNSWGENWGEKGYYKICRGPHDKNKCGVDSMVSSVTA 376


>gi|147809367|emb|CAN64491.1| hypothetical protein VITISV_015725 [Vitis vinifera]
          Length = 321

 Score =  389 bits (999), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 180/318 (56%), Positives = 234/318 (73%), Gaps = 4/318 (1%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTP 113
           +G E  F +F +K+ K Y+S+EE+ HR  IF  N+ RAA HQ LDP A HG+T FSDL+ 
Sbjct: 1   MGGEKEFRMFMEKYGKEYSSREEYVHRLGIFAKNMVRAAEHQALDPXALHGVTPFSDLSE 60

Query: 114 AEFRRTYLGLRRKLRLPKD-ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            EF R + G+  +  +    A+ A  L  + LP  FDWREKGAV  VK QG+CGSCW+FS
Sbjct: 61  EEFERMFTGVVGRPHMKGGVAETAAALEVDGLPESFDWREKGAVTEVKMQGTCGSCWAFS 120

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGA+EGA+F++T KL++LSEQQLVDCDH CD  +  +CDSGC GGLM +A++Y ++AGG
Sbjct: 121 TTGAVEGAHFISTKKLLTLSEQQLVDCDHMCDIRDKXACDSGCEGGLMTNAYKYLIEAGG 180

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  E  YPYTG  +   CKF   ++A  V NF+ V +BE+QIAANLV +GPLAV +NA +
Sbjct: 181 LEEESSYPYTG--KHGECKFKPDRVAVRVVNFTEVPIBENQIAANLVCHGPLAVGLNAXF 238

Query: 293 MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
           MQTYIGGVSCP IC +R ++HGVLLVGYG+ GY+ +R   KPYWIIKNSWG  WGE+GYY
Sbjct: 239 MQTYIGGVSCPLICPKRWINHGVLLVGYGAKGYSILRFGYKPYWIIKNSWGXRWGEHGYY 298

Query: 352 KICRGRNVCGVDSMVSTV 369
           ++CRG  +CG+++MVS V
Sbjct: 299 RLCRGHGMCGMNTMVSAV 316


>gi|1619905|gb|AAB16997.1| thiol protease isoform A, partial [Glycine max]
          Length = 318

 Score =  382 bits (981), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 186/246 (75%), Positives = 208/246 (84%), Gaps = 5/246 (2%)

Query: 127 LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG 186
           +R P  A +APILPT DLP DFDWR+KGAV  VKD G CGSCWSFSTTGALE + +LATG
Sbjct: 71  VRFPAHAQKAPILPTKDLPKDFDWRDKGAVTNVKDLGGCGSCWSFSTTGALEVSFYLATG 130

Query: 187 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 246
           +LVSLSEQQLVDCDH CDPEE G+CDSGCNGGLMN+AFE  L++GG+ +E+D PYTG D 
Sbjct: 131 ELVSLSEQQLVDCDHVCDPEEYGACDSGCNGGLMNNAFE-ILQSGGVQKEKDIPYTGRD- 188

Query: 247 GHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC 306
              CKFDK+K+AA+      VSLDE+QIAANLVKNGPLAVAINAV+MQTY+GGVSCPYIC
Sbjct: 189 -GTCKFDKTKVAATDL-IKRVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYIC 246

Query: 307 SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN-GYYKICRGRNVCGVDSM 365
            + LDHGVLLVGYG   YAPIR K KPYWIIKNSWGESWGEN GY +ICRGRNVCGVD+M
Sbjct: 247 GKHLDHGVLLVGYGEGRYAPIRFKNKPYWIIKNSWGESWGENDGYDEICRGRNVCGVDAM 306

Query: 366 VSTVAA 371
           VSTVAA
Sbjct: 307 VSTVAA 312


>gi|194352748|emb|CAQ00102.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 368

 Score =  379 bits (973), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 197/351 (56%), Positives = 239/351 (68%), Gaps = 16/351 (4%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           + +IRQVTD G      H + +  LL  E  F+ F ++  K Y+  EE+  R  +F AN+
Sbjct: 26  EDVIRQVTDSG------HGAGHPGLL-PEAQFAAFVRRHGKEYSGPEEYARRLRVFAANV 78

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL------RRKLRLPKDADQAPILPTN 142
            RAA HQ LDP A HG+T FSDLT  EF     GL       R  R    A  A      
Sbjct: 79  ARAAAHQALDPGARHGVTPFSDLTREEFEARLTGLVGAGDVLRSARRMPAAAPATEEEVA 138

Query: 143 DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 202
            LPA FDWR+KGAV  VK QG CGSCW+FSTTGA+EGANF+ATGKL+ LSEQQLVDCDH 
Sbjct: 139 ALPASFDWRDKGAVTDVKMQGVCGSCWAFSTTGAVEGANFVATGKLLDLSEQQLVDCDHT 198

Query: 203 CDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVA 262
           CD      C+SGC+GGLM +A+ Y + +GGLM +  YPYTG      C+FD+ K+A  VA
Sbjct: 199 CDAVAKTECNSGCSGGLMTNAYRYLMSSGGLMEQAAYPYTGAQ--GPCRFDRGKVAVRVA 256

Query: 263 NFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRL-DHGVLLVGYGS 321
           NF+ V LDEDQ+ A LV+ GPLAV +NA +MQTY+GGVSCP IC R + +HGVLLVGYG+
Sbjct: 257 NFTAVPLDEDQMRAALVRGGPLAVGLNAAFMQTYVGGVSCPLICPRAMVNHGVLLVGYGA 316

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
            G++ +RL  +PYW+IKNSWG  WGE GYYK+CRGRNVCGVDSMVS VA A
Sbjct: 317 RGFSALRLGYRPYWLIKNSWGAQWGEGGYYKLCRGRNVCGVDSMVSAVAVA 367


>gi|357116897|ref|XP_003560213.1| PREDICTED: probable cysteine proteinase A494-like [Brachypodium
           distachyon]
          Length = 373

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/354 (56%), Positives = 245/354 (69%), Gaps = 15/354 (4%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYAS-QEEHDHRFTIFKAN 87
           D +IRQVTD G        S     L  E  F+ F ++  K Y+   EE+  R  +F AN
Sbjct: 26  DDVIRQVTDNGAPAARRPPSPG---LLPEAKFAAFVRRHGKEYSGGAEEYARRLRVFAAN 82

Query: 88  LRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRK---LRLPKDADQAPILPTNDL 144
           L RAA HQ LDP A HG+T FSDLTP EF+    GL+++     +P  A +A       L
Sbjct: 83  LARAAAHQALDPGARHGVTPFSDLTPEEFQARLTGLQQQGTNNNMPAAA-RATAEELATL 141

Query: 145 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECD 204
           PA FDWR KGAV  VK QG CGSCW+FSTTGA+EGA+F+ATGKL++LSEQQLVDCDH CD
Sbjct: 142 PASFDWRAKGAVTEVKMQGMCGSCWAFSTTGAVEGAHFVATGKLLNLSEQQLVDCDHTCD 201

Query: 205 PEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF 264
                 CDSGC+GGLM +A+ Y ++AGGLM +  YPYTG      C+FD +K+A  V +F
Sbjct: 202 AVAKNECDSGCSGGLMTNAYTYLIRAGGLMEQAAYPYTGAQ--GTCRFDANKVAVRVTSF 259

Query: 265 SVVSL-DEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRL-DHGVLLVGYGSA 322
           + V   DEDQI A+LV+ GPLAV +NA +MQTY+GGVSCP +C R+L +HGVLLVGYG+ 
Sbjct: 260 TAVPPDDEDQIRASLVRAGPLAVGLNAAFMQTYLGGVSCPLLCPRKLINHGVLLVGYGAR 319

Query: 323 GYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVSTVAAAV 373
           G AP+RL  +PYWIIKNSWG+ WGE GYY++CRG   RNVCGVDSMVS VA A+
Sbjct: 320 GLAPLRLGYRPYWIIKNSWGKEWGEGGYYRLCRGARNRNVCGVDSMVSAVAVAL 373


>gi|242045644|ref|XP_002460693.1| hypothetical protein SORBIDRAFT_02g033270 [Sorghum bicolor]
 gi|241924070|gb|EER97214.1| hypothetical protein SORBIDRAFT_02g033270 [Sorghum bicolor]
          Length = 373

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 196/361 (54%), Positives = 238/361 (65%), Gaps = 29/361 (8%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLG--AEHHFSLFKKKFNKAYASQEEHDHRFTIFKA 86
           D  IRQVTDG               LG   E  F+ F ++  + Y+  EE+  R  +F A
Sbjct: 22  DGFIRQVTDG------RRSRAGAGALGLLPEAQFAAFVRRHGRRYSGPEEYARRLRVFAA 75

Query: 87  NLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR-------RKLRLPKDADQAPIL 139
           NL RAA HQ LDP+A HG+T FSDLT  EF     G+R       ++L +      AP  
Sbjct: 76  NLARAAAHQALDPTARHGVTPFSDLTREEFEARLTGVRAGAGGDVQRLVM----SGAPAA 131

Query: 140 P------TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSE 193
           P       + LPA FDWR+KGAV  VK QG+CGSCW+FSTTGA+EGANFLATGKL+ LSE
Sbjct: 132 PPASQEEVSRLPASFDWRDKGAVTGVKMQGACGSCWAFSTTGAVEGANFLATGKLLELSE 191

Query: 194 QQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD 253
           QQLVDCDH C       C++GC GGLM +A+ Y +K+GGLM +  YPYTG      C+FD
Sbjct: 192 QQLVDCDHTCSAVAQNECNNGCAGGLMTNAYAYLMKSGGLMEQRAYPYTGAP--GPCRFD 249

Query: 254 KSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LD 311
            +K A  VANF+ V   DE QI A LV+ GPLAV +NA +MQTY+GGVSCP +C R  ++
Sbjct: 250 PAKAAVRVANFTAVPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGVSCPLLCPRAWVN 309

Query: 312 HGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           HGVLLVGYG+ G+A +RL  +PYWIIKNSWGE WGE GYY++CRG NVCGVDSMVS VA 
Sbjct: 310 HGVLLVGYGARGFAALRLGYRPYWIIKNSWGERWGEQGYYRLCRGSNVCGVDSMVSAVAV 369

Query: 372 A 372
           A
Sbjct: 370 A 370


>gi|414590229|tpg|DAA40800.1| TPA: putative cysteine protease family protein [Zea mays]
          Length = 381

 Score =  370 bits (950), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 191/352 (54%), Positives = 235/352 (66%), Gaps = 16/352 (4%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           D+ IRQVT  G             LL  E  F+ F ++  + Y+  +E+  R  +F ANL
Sbjct: 35  DKFIRQVTTQGT-----RAGAGPGLL-PEAQFAAFVRRHGRRYSGPKEYARRLRVFAANL 88

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND----- 143
            RAA HQ LDP+A HG+T FSDLT  EF     GLR    + +     P  P        
Sbjct: 89  ARAAAHQALDPTARHGVTPFSDLTREEFEARLTGLRAGGDVQRLMSGVPAAPPASKEEVA 148

Query: 144 -LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 202
            LPA FDWR+KGAV  VK QG+CGSCW+FSTTGA+EGANFLATG+LV LSEQQLVDCDH 
Sbjct: 149 RLPASFDWRDKGAVTGVKTQGACGSCWAFSTTGAVEGANFLATGELVDLSEQQLVDCDHT 208

Query: 203 CDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVA 262
           C       C++GC GGLM +A+ Y +++GGLM +  YPYTG      C+FD +++A  VA
Sbjct: 209 CSAVAQNECNNGCAGGLMTNAYSYLMESGGLMEQSAYPYTGA--AGPCRFDPTQVAVRVA 266

Query: 263 NFSVVSL-DEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYG 320
           NF+ V   DE QI A LV+ GPLAV +NA +MQTY+GGVSCP IC R  ++HGVLLVGYG
Sbjct: 267 NFTAVPAGDEAQIRAALVRRGPLAVGLNAAFMQTYVGGVSCPLICPRAWVNHGVLLVGYG 326

Query: 321 SAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           + G+A +RL  +PYWIIKNSWG+ WGE GYY++CRG NVCGVDSMVS VA A
Sbjct: 327 ARGFAALRLGYRPYWIIKNSWGKQWGEQGYYRLCRGSNVCGVDSMVSAVAVA 378


>gi|115472081|ref|NP_001059639.1| Os07g0480900 [Oryza sativa Japonica Group]
 gi|27261016|dbj|BAC45132.1| putative cysteine proteinase [Oryza sativa Japonica Group]
 gi|113611175|dbj|BAF21553.1| Os07g0480900 [Oryza sativa Japonica Group]
 gi|215693312|dbj|BAG88694.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 376

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 193/356 (54%), Positives = 240/356 (67%), Gaps = 27/356 (7%)

Query: 32  IRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA 91
           IRQVTDGG              L  E  F+ F ++  + Y+  EE+  R  +F ANL RA
Sbjct: 29  IRQVTDGGYWPPG---------LLPEAQFAAFVRRHGREYSGPEEYARRLRVFAANLARA 79

Query: 92  ARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR-------RKLRLPKDADQAPILPTNDL 144
           A HQ LDP+A HG+T FSDLT  EF     GL        R+  +P  A  A     + L
Sbjct: 80  AAHQALDPTARHGVTPFSDLTREEFEARLTGLAADVGDDVRRRPMPSAA-PATEEEVSGL 138

Query: 145 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECD 204
           PA FDWR++GAV  VK QG+CGSCW+FSTTGA+EGANFLATG L+ LSEQQLVDCDH CD
Sbjct: 139 PASFDWRDRGAVTDVKMQGACGSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCD 198

Query: 205 PEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF 264
            E+   CDSGC GGLM +A+ Y + +GGLM +  YPYTG      C+FD +++A  VANF
Sbjct: 199 AEKKTECDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQ--GTCRFDANRVAVRVANF 256

Query: 265 SVVSLD-------EDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLL 316
           +VV+         + Q+ A LV++GPLAV +NA YMQTY+GGVSCP +C R  ++HGVLL
Sbjct: 257 TVVAPPGGNDGDGDAQMRAALVRHGPLAVGLNAAYMQTYVGGVSCPLVCPRAWVNHGVLL 316

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           VGYG  G+A +RL  +PYWIIKNSWG++WGE GYY++CRGRNVCGVD+MVS VA A
Sbjct: 317 VGYGERGFAALRLGHRPYWIIKNSWGKAWGEQGYYRLCRGRNVCGVDTMVSAVAVA 372


>gi|218199600|gb|EEC82027.1| hypothetical protein OsI_25996 [Oryza sativa Indica Group]
          Length = 709

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 192/354 (54%), Positives = 240/354 (67%), Gaps = 31/354 (8%)

Query: 32  IRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA 91
           IRQVTDGG              L  E  F+ F ++  + Y+  EE+  R  +F ANL RA
Sbjct: 29  IRQVTDGGYWPPG---------LLPEAQFAAFVRRHGREYSGPEEYARRLRVFAANLARA 79

Query: 92  ARHQKLDPSATHGITQFSDLTPAEFRRTYLGL----------RRKLRLPKDADQAPILPT 141
           A HQ LDP+A HG+T FSDLT  EF     GL          RR+L +P  A  A     
Sbjct: 80  AAHQALDPTARHGVTPFSDLTREEFEARLTGLATDVGDDDVRRRRLPMPSAAP-ATEEEV 138

Query: 142 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDH 201
           + LP+ FDWR++GAV  VK QG+CGSCW+FSTTGA+EGANFLATG L+ LSEQQLVDCDH
Sbjct: 139 SGLPSSFDWRDRGAVTGVKMQGACGSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDH 198

Query: 202 ECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV 261
            CD E+   CDSGC GGLM +A+ Y + +GGLM +  YPYTG     AC+FD +++A  V
Sbjct: 199 TCDAEKKTECDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQ--GACRFDANRVAVRV 256

Query: 262 ANFSVVSL-------DED-QIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LDH 312
           ANF+VV+        D D Q+ A LV++GPLAV +NA YMQTY+GGVSCP +C R  ++H
Sbjct: 257 ANFTVVAPAAGPGGNDGDAQMRAALVRHGPLAVGLNAAYMQTYVGGVSCPLVCPRAWVNH 316

Query: 313 GVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMV 366
           GVLLVGYG  G+A +RL  +PYWIIKNSWG++WGE GYY++CRGRNVCGVD+M+
Sbjct: 317 GVLLVGYGERGFAALRLGHRPYWIIKNSWGKAWGEQGYYRLCRGRNVCGVDTML 370


>gi|5777611|emb|CAB53397.1| cysteine protease [Medicago sativa]
          Length = 209

 Score =  363 bits (933), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 174/209 (83%), Positives = 192/209 (91%), Gaps = 3/209 (1%)

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGS W+FSTTGALEGAN+LATGKLVSLSEQQLVDCDH CDPEE  SCDSGCNGGLMN+AF
Sbjct: 1   CGSGWAFSTTGALEGANYLATGKLVSLSEQQLVDCDHVCDPEERNSCDSGCNGGLMNNAF 60

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 284
           EY L++GG++ E+DY YTG D   +CKFDKSKI ASV+NFSVVSLDEDQIAANLVKNGPL
Sbjct: 61  EYILQSGGVVSEKDYAYTGRD--GSCKFDKSKIVASVSNFSVVSLDEDQIAANLVKNGPL 118

Query: 285 AVAINAVYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           AVAINA +MQTY+ GVSCP+IC++ RLDHGVLLVG+GS GYAPIRLKEKPYWIIKNSWG+
Sbjct: 119 AVAINAAWMQTYMSGVSCPHICAKARLDHGVLLVGFGSGGYAPIRLKEKPYWIIKNSWGQ 178

Query: 344 SWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           +WGE GYYKICRGRNVCGVDSMVSTVAAA
Sbjct: 179 NWGEEGYYKICRGRNVCGVDSMVSTVAAA 207


>gi|52546916|gb|AAU81591.1| cysteine proteinase, partial [Petunia x hybrida]
          Length = 190

 Score =  348 bits (894), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 165/185 (89%), Positives = 175/185 (94%), Gaps = 2/185 (1%)

Query: 187 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 246
           +LVSLSEQQLVDCDHECDPEE  SCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR
Sbjct: 3   ELVSLSEQQLVDCDHECDPEEKDSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 62

Query: 247 GHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC 306
              CKFD +K+AA VANFSVVSLDE+QIAANLVKNGPLAVAINAV+MQTY+GGVSCPYIC
Sbjct: 63  AK-CKFDNTKVAAKVANFSVVSLDEEQIAANLVKNGPLAVAINAVFMQTYVGGVSCPYIC 121

Query: 307 SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMV 366
           S+R DHGVLLVGYGS G+APIR+KEKPYWIIKNSWGE WGE+GYYKICRGRNVCGVDSMV
Sbjct: 122 SKRQDHGVLLVGYGS-GFAPIRMKEKPYWIIKNSWGEKWGESGYYKICRGRNVCGVDSMV 180

Query: 367 STVAA 371
           STVAA
Sbjct: 181 STVAA 185


>gi|308808478|ref|XP_003081549.1| Cysteine proteinase Cathepsin F (ISS) [Ostreococcus tauri]
 gi|116060014|emb|CAL56073.1| Cysteine proteinase Cathepsin F (ISS), partial [Ostreococcus tauri]
          Length = 293

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 169/292 (57%), Positives = 216/292 (73%), Gaps = 9/292 (3%)

Query: 88  LRRAARHQKLD-PSATHGITQFSDLTPAEFRRTYLG---LRRKLRLPKDADQAPI--LPT 141
           L RAA  Q  D  SA HG+T+FSDLTP EF   YLG   L  + R    A    I  LPT
Sbjct: 3   LIRAATQQANDRGSAKHGVTRFSDLTPEEFAERYLGHVKLSSEHREKVRARGGVIEDLPT 62

Query: 142 NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDH 201
             LPA+FDWR KGAV  VKDQG CGSCW+FSTTGA+EGA+F++TGKLV LSEQQL+DCD 
Sbjct: 63  KHLPAEFDWRFKGAVSRVKDQGQCGSCWTFSTTGAIEGAHFISTGKLVELSEQQLLDCDV 122

Query: 202 ECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV 261
            CDP+ P +CDSGCNGGL ++A EY ++ GG+  E+ YPY G ++G  CK D+  + A++
Sbjct: 123 GCDPDVPNACDSGCNGGLPSNAMEYIVEHGGIDTEKSYPYVG-EKGE-CKADEGTLGATL 180

Query: 262 ANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC-SRRLDHGVLLVGYG 320
            NFS VS DE Q+AA LVK+GPL++ INA +MQTYIGGV+CP++C S  LDHGVL+VGYG
Sbjct: 181 KNFSYVSSDEKQMAAALVKHGPLSIGINAAWMQTYIGGVACPWLCDSEALDHGVLIVGYG 240

Query: 321 SAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           S+G+AP+R +++PYWI+KNSW  +WGE GYY+IC+ +  CG+++MV     A
Sbjct: 241 SSGFAPVRWQQEPYWIVKNSWSPAWGEGGYYRICKDKGSCGINNMVVAAHGA 292


>gi|302774134|ref|XP_002970484.1| hypothetical protein SELMODRAFT_93661 [Selaginella moellendorffii]
 gi|300162000|gb|EFJ28614.1| hypothetical protein SELMODRAFT_93661 [Selaginella moellendorffii]
          Length = 343

 Score =  339 bits (870), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 181/374 (48%), Positives = 239/374 (63%), Gaps = 37/374 (9%)

Query: 3   SKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSL 62
           +K + + LV L++     S +   D+ + IRQVTD            N ++   E HF  
Sbjct: 2   AKALAIILVGLLILVVCCSSSNRLDIGK-IRQVTD------------NLEVKDVEGHFKH 48

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLG 122
           F +KF K Y + EE+ HR  +F+ANL      +K DP+A HGIT F+DLTP E  R +LG
Sbjct: 49  FMQKFGKVYGTTEEYVHRLKVFQANLAHVMSLKKQDPTAIHGITSFADLTPEELSR-FLG 107

Query: 123 LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
            R+     +  +QAP+LPT++LP  FDWRE GAV PVK QG CGSCW+FSTTG +EGANF
Sbjct: 108 FRKAYS-NRVVNQAPLLPTDNLPEAFDWREHGAVTPVKFQGRCGSCWTFSTTGVVEGANF 166

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
           L TGKL+SLSE+QL+DCD++         D+GC GG M SA+EY +KA GL  EEDYPY 
Sbjct: 167 LKTGKLISLSEEQLIDCDYK---------DNGCEGGDMLSAYEY-VKARGLEAEEDYPYE 216

Query: 243 GTDRGHA-----CKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
                H      C++  SK+ A++AN+S VS DEDQIAANLVKNGPL++A+    + TY 
Sbjct: 217 ELGYRHKPVRGPCRYQPSKVVATIANYSRVSEDEDQIAANLVKNGPLSIALRGNVLFTYE 276

Query: 298 GGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR 357
           GGV+CP IC   ++HGVLLVGYG      +R     YW  KN+W + +GENGY+++CRG 
Sbjct: 277 GGVACPRICPGEINHGVLLVGYGVEN--GLR-----YWTFKNTWTDEFGENGYFRLCRGV 329

Query: 358 NVCGVDSMVSTVAA 371
            VC ++S V TV+ 
Sbjct: 330 GVCDMNSEVGTVST 343


>gi|302793594|ref|XP_002978562.1| hypothetical protein SELMODRAFT_109056 [Selaginella moellendorffii]
 gi|300153911|gb|EFJ20548.1| hypothetical protein SELMODRAFT_109056 [Selaginella moellendorffii]
          Length = 343

 Score =  337 bits (863), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 181/374 (48%), Positives = 238/374 (63%), Gaps = 37/374 (9%)

Query: 3   SKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSL 62
           +K + + LV L++     S +   D+ + IRQVTD            N ++   E HF  
Sbjct: 2   AKALAIILVGLLILVICCSSSNRLDIGK-IRQVTD------------NLEVDDVEGHFKH 48

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLG 122
           F +KF K Y + EE+ HR  +F+ANL      +K DP+A HGIT F+DLTP E  R +LG
Sbjct: 49  FMQKFGKVYGTTEEYVHRLKVFQANLVHVMSLKKQDPTAIHGITSFADLTPEELSR-FLG 107

Query: 123 LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
            R+     +  +QAP+LPT++LP  FDWRE GAV PVK QG CGSCW+FSTTG +EGANF
Sbjct: 108 FRKAYS-NRVVNQAPLLPTDNLPEAFDWREHGAVTPVKFQGRCGSCWTFSTTGVVEGANF 166

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
           L TGKL+SLSE+QL+DCD++         D+GC GG M SA+EY +KA GL  +EDYPY 
Sbjct: 167 LKTGKLISLSEEQLIDCDYK---------DNGCEGGDMLSAYEY-VKARGLEADEDYPYE 216

Query: 243 GTDRGHA-----CKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
                H      C++  SK+ A++AN+S VS DEDQIAANLVKNGPL++A+    + TY 
Sbjct: 217 ELGYRHKPVRGPCRYQPSKVVATIANYSRVSEDEDQIAANLVKNGPLSIALRGNVLFTYE 276

Query: 298 GGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR 357
           GGV+CP IC   ++HGVLLVGYG      +R     YW  KNSW + +GENGY+++CRG 
Sbjct: 277 GGVACPRICPGEINHGVLLVGYGVEN--GLR-----YWTFKNSWTDEFGENGYFRLCRGV 329

Query: 358 NVCGVDSMVSTVAA 371
            VC + S V TV+ 
Sbjct: 330 GVCDMTSEVGTVST 343


>gi|412992445|emb|CCO18425.1| unknown [Bathycoccus prasinos]
          Length = 500

 Score =  329 bits (844), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 158/328 (48%), Positives = 219/328 (66%), Gaps = 29/328 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLTPA 114
            F   KK++ +   ++EE++ R  IF+ N +RA   +  D     SA HG+T+F DL+  
Sbjct: 176 QFPEKKKEYERK--TEEEYEKRMEIFQENWKRAIEREIDDRKGGGSAKHGVTKFFDLSEE 233

Query: 115 EFRRTYLGL---------------RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPV 159
           EFR  YLGL               + ++  P + D         LP  +DWR +GAV PV
Sbjct: 234 EFREQYLGLLSTSTSSSASKDAFRKHQMEAPSEED------LEKLPQYYDWRARGAVTPV 287

Query: 160 KDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           KDQG CGSCW+FSTTGA+EGANF+ TGKLVSLSEQQL+DCD  C P+ P +CDSGCNGGL
Sbjct: 288 KDQGQCGSCWTFSTTGAIEGANFIKTGKLVSLSEQQLLDCDVGCAPDIPNACDSGCNGGL 347

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV 279
            ++A EY ++ GGL  E+ YPY    +   C+  + K+ A+++N++ V  +E  +A  LV
Sbjct: 348 PSNAMEYIVEHGGLDTEKSYPYKAY-KEDTCRAKEGKLGATISNYTFVGKNETHMAHALV 406

Query: 280 KNGPLAVAINAVYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIK 338
           K GPL++ INA +MQ+Y+GGV+CP++C++  LDHGVL+VGYG  G+AP RL ++PYW+IK
Sbjct: 407 KYGPLSIGINAAWMQSYVGGVACPWLCNKDALDHGVLIVGYGEEGFAPARLHKEPYWVIK 466

Query: 339 NSWGESWGENGYYKICRGRNVCGVDSMV 366
           NSWG  WGE GYY+IC+ +  CGV++MV
Sbjct: 467 NSWGMGWGEEGYYRICKDKGNCGVNNMV 494


>gi|145351119|ref|XP_001419933.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580166|gb|ABO98226.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 272

 Score =  320 bits (820), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 152/266 (57%), Positives = 196/266 (73%), Gaps = 9/266 (3%)

Query: 108 FSDLTPAEFRRTYLG------LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKD 161
           FSDLT  EF   YLG        R+ R  +  +    LP   LP +FDWR KGAV  VKD
Sbjct: 2   FSDLTAEEFAARYLGHVRLSSEEREKRKARGGETLETLPVEHLPEEFDWRFKGAVTRVKD 61

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QG CGSCW+FSTTGA+EGA+F++TGKLV LSEQQLVDCD  CDP+ P +CDSGCNGGL +
Sbjct: 62  QGQCGSCWTFSTTGAIEGAHFISTGKLVELSEQQLVDCDVGCDPDVPNACDSGCNGGLPS 121

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN 281
           +A EY ++ GG+  E+ YPY G ++G  CK  K K+ A++ NFS VS DE Q+AA LVK 
Sbjct: 122 NAMEYIVEHGGIDTEKSYPYVG-EKGE-CKAKKGKLGATLKNFSFVSDDEKQMAAALVKY 179

Query: 282 GPLAVAINAVYMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           GPL++ INA +MQ+YIGGV+CP++C +  LDHGVL+VGYGS+G+AP+R   +PYWI+KNS
Sbjct: 180 GPLSIGINAAWMQSYIGGVACPWLCDAESLDHGVLIVGYGSSGFAPVRWAPEPYWIVKNS 239

Query: 341 WGESWGENGYYKICRGRNVCGVDSMV 366
           W  +WGE GYY+IC+ +  CG+++MV
Sbjct: 240 WSPAWGEGGYYRICKDKGSCGINNMV 265


>gi|296085959|emb|CBI31400.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  317 bits (811), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 145/238 (60%), Positives = 187/238 (78%), Gaps = 3/238 (1%)

Query: 133 ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLS 192
           A+ A  L  + LP  FDWREKGAV  VK QG+CGSCW+FSTTGA+EGA+F++T KL++LS
Sbjct: 6   AETAAALEVDGLPESFDWREKGAVTEVKMQGTCGSCWAFSTTGAVEGAHFISTKKLLTLS 65

Query: 193 EQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 252
           EQQLVDCDH CD  +  +CDSGC GGLM +A++Y ++AGGL  E  YPYTG  +   CKF
Sbjct: 66  EQQLVDCDHMCDIRDKTACDSGCEGGLMTNAYKYLIEAGGLEEESSYPYTG--KHGECKF 123

Query: 253 DKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LD 311
              ++A  V NF+ V ++E+QIAANLV +GPLAV +NA++MQTYIGGVSCP IC +R ++
Sbjct: 124 KPDRVAVRVVNFTEVPINENQIAANLVCHGPLAVGLNAIFMQTYIGGVSCPLICPKRWIN 183

Query: 312 HGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTV 369
           HGVLLVGYG+ GY+ +R   KPYWIIKNSWG+ WGE+GYY++CRG  +CG+++MVS V
Sbjct: 184 HGVLLVGYGAKGYSILRFGYKPYWIIKNSWGKRWGEHGYYRLCRGHGMCGMNTMVSAV 241


>gi|255088003|ref|XP_002505924.1| cysteine endopeptidase [Micromonas sp. RCC299]
 gi|226521195|gb|ACO67182.1| cysteine endopeptidase [Micromonas sp. RCC299]
          Length = 291

 Score =  315 bits (806), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 158/284 (55%), Positives = 199/284 (70%), Gaps = 10/284 (3%)

Query: 91  AARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRK----LRLPKDADQAPILPTNDLPA 146
           A R  +   SA HG+TQFSDLTP EF  T+LG +        +       P  P +DLP 
Sbjct: 5   AERQAQDRGSAVHGVTQFSDLTPTEFASTFLGTKLANEDVAAIRSGMTTLPDYPAHDLPL 64

Query: 147 DFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPE 206
           +FDWRE+GAV PVK+QG+CGSCW+FS TGA+EGANFL TG+LVSLSEQQLVDCDH CDP 
Sbjct: 65  EFDWRERGAVTPVKNQGACGSCWTFSATGAVEGANFLKTGELVSLSEQQLVDCDHTCDPS 124

Query: 207 EPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV 266
            P +CD GCNGGL  +A  Y  K  GL  E +YPY G D G          AASV++F++
Sbjct: 125 APRNCDYGCNGGLPLNAMRYVQKH-GLDTESNYPYKGVD-GKCASARHGPAAASVSSFNL 182

Query: 267 VSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYA 325
           VS +E QIAA L+K+GPL++ I+A +MQTY+GGV+CP+IC++  LDHGVL+VGYG  G A
Sbjct: 183 VSTNETQIAAALLKHGPLSIGIDAAWMQTYVGGVACPWICNKAGLDHGVLIVGYGVNGTA 242

Query: 326 PIRL--KEKPYWIIKNSWGESWG-ENGYYKICRGRNVCGVDSMV 366
           P R   + + YWI+KNSWG +WG E GYY IC+ R  CG+++MV
Sbjct: 243 PARPWHRRQDYWIVKNSWGPNWGVEGGYYHICKDRAACGLNTMV 286


>gi|303275866|ref|XP_003057227.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461579|gb|EEH58872.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 329

 Score =  313 bits (802), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 165/326 (50%), Positives = 209/326 (64%), Gaps = 22/326 (6%)

Query: 57  EHHFSLFKKKFNKAYASQ-EEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAE 115
           E  F  F  +  K YAS  +E+  R  IF  N+ RA      D  A +G T F+DLT  E
Sbjct: 5   ERDFDAFVLEHGKTYASDAKEYAKRLEIFAENMARAKEMSARD-GAEYGATPFADLTEDE 63

Query: 116 FRRTYLGLRRKLRLPKDADQA------------PILPTNDLPADFDWREKGAVGPVKDQG 163
           F  + L     +R P DA +             P LPT ++P +FDWR  GAV PVK+QG
Sbjct: 64  FASSLL-----MREPIDAARVERLKRHESSRVLPHLPTENIPLNFDWRALGAVTPVKNQG 118

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCWSFS TGA+EGA+F+ +G LVSLSEQQLVDCDH CDP+   +CDSGC+GGL  +A
Sbjct: 119 MCGSCWSFSATGAVEGAHFVKSGALVSLSEQQLVDCDHTCDPDSGTACDSGCDGGLPANA 178

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKF-DKSKIAASVANFSVVSLDEDQIAANLVKNG 282
             Y +K GGL  E  YPY G      CK  +    AA++ N+S VS DE QIAA LVK+G
Sbjct: 179 MAYVVKRGGLDAEAAYPYLGARGDGRCKSKEDGPPAATITNYSFVSADESQIAAALVKHG 238

Query: 283 PLAVAINAVYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIR-LKEKPYWIIKNS 340
           PL+V I+A +MQ Y  GV+CP+ C + RLDHGVL+VG+G+ G AP R  + +P+W+IKNS
Sbjct: 239 PLSVGIDARWMQLYRRGVACPWACDKTRLDHGVLIVGFGAEGRAPARGFRREPFWLIKNS 298

Query: 341 WGESWGENGYYKICRGRNVCGVDSMV 366
           WG  WGE GYYKIC+ +  CGV++MV
Sbjct: 299 WGARWGEEGYYKICKDKGSCGVNTMV 324


>gi|388519111|gb|AFK47617.1| unknown [Medicago truncatula]
          Length = 241

 Score =  312 bits (800), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/229 (66%), Positives = 182/229 (79%), Gaps = 15/229 (6%)

Query: 9   FLVSLVVFSAVSSGT--LIDDV---DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLF 63
           FL++L +F+ V++    L DD    D LIRQV D          +  + +L AEHHF+ F
Sbjct: 5   FLIALFLFATVATAATTLSDDTNSDDLLIRQVVD----------TAEDHILNAEHHFTSF 54

Query: 64  KKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL 123
           K KF+K YA++EEHD+RF +FK+NL +A  HQKLDPSA HGIT+FSDLT +EFRR +LGL
Sbjct: 55  KSKFSKNYATKEEHDYRFGVFKSNLIKAKLHQKLDPSAQHGITKFSDLTASEFRRQFLGL 114

Query: 124 RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
            ++LRLP  A +APILPTN+LP DFDWREKGAV PVKDQGSCGSCW+FSTTGALEGAN+L
Sbjct: 115 NKRLRLPAHAQKAPILPTNNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGANYL 174

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           ATGKL SLSEQQLVDCDH CDPEE GSCDSGCNGGLMN+AFEY L++GG
Sbjct: 175 ATGKLTSLSEQQLVDCDHVCDPEERGSCDSGCNGGLMNNAFEYILQSGG 223


>gi|290997496|ref|XP_002681317.1| cysteine protease [Naegleria gruberi]
 gi|284094941|gb|EFC48573.1| cysteine protease [Naegleria gruberi]
          Length = 350

 Score =  307 bits (786), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 154/319 (48%), Positives = 215/319 (67%), Gaps = 17/319 (5%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  F KK  K Y + E+H  R+ IFK+N+ +A  +  +    T G+++F DLTP EF+R 
Sbjct: 36  FVKFSKKHAKLYGA-EDHGKRYQIFKSNVEKARYYNHVGKRETFGVSKFMDLTPEEFKRM 94

Query: 120 YL-------GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           +L         R+ L  PK+A         D P  +DWR+KGAV PVK+QG+CGSCW+FS
Sbjct: 95  FLMKTYTPEEARKILAAPKEA-VVTAQQVKDTPTSWDWRQKGAVTPVKNQGACGSCWTFS 153

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEE-PGSCDSGCNGGLMNSAFEYTLKAG 231
           TTG +EG + + TGKLVSLSEQQLVDCDH C   +   +CD+GCNGGLM SAF+Y +K G
Sbjct: 154 TTGNVEGIHQIKTGKLVSLSEQQLVDCDHNCVTYQGQQACDAGCNGGLMWSAFQYVIKTG 213

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL+ E+ YPY G D    C+F+KS +A ++ +++ +  DE ++AA L  NGP+++AINA 
Sbjct: 214 GLVTEDSYPYEGVD--DTCRFNKSNVAVTINSWTSIPSDEGKMAAWLAANGPISIAINAE 271

Query: 292 YMQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKP-YWIIKNSWGESWGENG 349
           ++QTY  G+S P+ C+ + LDHGVL+VG+G+       L EK  YWIIKNSWG  WGE+G
Sbjct: 272 WLQTYTSGISNPWFCNPQDLDHGVLIVGFGTGSN---WLGEKEDYWIIKNSWGADWGESG 328

Query: 350 YYKICRGRNVCGVDSMVST 368
           Y++I RG+  CG++S+ S+
Sbjct: 329 YFRIVRGKGKCGLNSVPSS 347


>gi|353441136|gb|AEQ94152.1| drought-inducible cysteine proteinase [Elaeis guineensis]
          Length = 252

 Score =  303 bits (775), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 160/242 (66%), Positives = 184/242 (76%), Gaps = 12/242 (4%)

Query: 17  SAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEE 76
           S  SS     + D LI QV    DE        +   L AE HFS F ++F K+YA ++E
Sbjct: 20  SVASSWPSYAEDDPLIVQVVPESDE--------DELRLNAEAHFSSFLRRFGKSYADEKE 71

Query: 77  HDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPK---DA 133
           H +RF++FKANLRRA RHQK+DP+A HGIT+FSDLTPAEFRRTYLGLR   RL +    +
Sbjct: 72  HAYRFSVFKANLRRARRHQKMDPTAVHGITKFSDLTPAEFRRTYLGLRGGRRLRRALASS 131

Query: 134 DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSE 193
            +APILPTN+LP DFDWR+ GAV  VKDQGSCGSCWSFS +GALEGANFLATG+L SLSE
Sbjct: 132 HEAPILPTNNLPTDFDWRDHGAVTGVKDQGSCGSCWSFSASGALEGANFLATGQLESLSE 191

Query: 194 QQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD 253
           QQLVDCDHECD  EP SCDSGCNGGLM +AFEY LK+GGL  E+DYPYTGTDRG  CKFD
Sbjct: 192 QQLVDCDHECDSSEPDSCDSGCNGGLMTTAFEYLLKSGGLELEKDYPYTGTDRGR-CKFD 250

Query: 254 KS 255
           +S
Sbjct: 251 ES 252


>gi|2253415|gb|AAB62937.1| stress-induced cysteine proteinase [Lavatera thuringiaca]
          Length = 175

 Score =  302 bits (774), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 138/170 (81%), Positives = 158/170 (92%), Gaps = 1/170 (0%)

Query: 202 ECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV 261
           ECDP++ G+C++GC+GGLM SAFEYTLKAGGL REE+YPYTG DRG  CKFDK+KIAASV
Sbjct: 1   ECDPQQYGACNAGCSGGLMTSAFEYTLKAGGLEREEEYPYTGIDRG-GCKFDKTKIAASV 59

Query: 262 ANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGS 321
           +NFSV+S+DEDQIAAN+VK+GPLAV INA +MQTYIGGVSCPYIC R LDHGVLLVGYG+
Sbjct: 60  SNFSVISVDEDQIAANMVKHGPLAVGINAAFMQTYIGGVSCPYICFRSLDHGVLLVGYGA 119

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           AGYAP+R KEKP+WIIKNSWG +WGE+GYYKICRGRNVCGVDSMVS+VAA
Sbjct: 120 AGYAPVRFKEKPFWIIKNSWGANWGEDGYYKICRGRNVCGVDSMVSSVAA 169


>gi|118488886|gb|ABK96252.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 156

 Score =  301 bits (770), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 141/152 (92%), Positives = 149/152 (98%), Gaps = 1/152 (0%)

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV 279
           MNSAFEYTLKAGGLMREEDYPYTGTDRG ACKFDK+K+AA VANFSVVSLDEDQIAANLV
Sbjct: 1   MNSAFEYTLKAGGLMREEDYPYTGTDRG-ACKFDKNKVAARVANFSVVSLDEDQIAANLV 59

Query: 280 KNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
           KNGPLAVAINAV+MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGY+P+R+KEKP+WIIKN
Sbjct: 60  KNGPLAVAINAVFMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYSPVRMKEKPFWIIKN 119

Query: 340 SWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           SWGE WGENG+YKICRGRNVCGVDSMVSTVAA
Sbjct: 120 SWGEKWGENGFYKICRGRNVCGVDSMVSTVAA 151


>gi|1353726|gb|AAB01769.1| cysteine proteinase homolog, partial [Naegleria fowleri]
          Length = 347

 Score =  300 bits (769), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 154/320 (48%), Positives = 218/320 (68%), Gaps = 19/320 (5%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  F +K+ K Y + EEH++R+ IFKAN+ ++  +  +      GIT+FSDLTP EF+R 
Sbjct: 33  FIKFSRKYAKVYGT-EEHNNRYQIFKANVEKSRYYNHVGKRENFGITKFSDLTPEEFKRM 91

Query: 120 YLGLRRKLRLPKDADQAPILPTNDL---------PADFDWREKGAVGPVKDQGSCGSCWS 170
           +L    K   P++A +    P + +         P  FDWR+ GAV  VK+QG+CGSCW+
Sbjct: 92  FL---MKTYTPEEAKKILAAPQHAVLSEKEVQTAPTSFDWRQHGAVTRVKNQGACGSCWT 148

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHEC-DPEEPGSCDSGCNGGLMNSAFEYTLK 229
           FSTTG +EG   +  GKLVSLSEQQLVDCDH C   +   +CDSGCNGGLM SAF+Y +K
Sbjct: 149 FSTTGNVEGQWAIKKGKLVSLSEQQLVDCDHNCVTYQNQQACDSGCNGGLMWSAFQYVIK 208

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  E+ YPY G D    C+F+KS +AA++++++ +S DE+Q+AA L  NGP+++AIN
Sbjct: 209 NGGLDTEDSYPYEGVD--DTCRFNKSNVAATISSWTSISSDENQMAAWLAANGPISIAIN 266

Query: 290 AVYMQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           A ++Q Y  G+S P+ C+ + LDHGVL+VGYG  G + +   E+ YWI+KNSWG  WGE+
Sbjct: 267 AEWLQYYTSGISDPWFCNPQDLDHGVLIVGYG-VGKSWLG-SEENYWIVKNSWGSDWGED 324

Query: 349 GYYKICRGRNVCGVDSMVST 368
           GY++I RG+  CG++S+ S+
Sbjct: 325 GYFRIIRGKGKCGLNSVPSS 344


>gi|290980288|ref|XP_002672864.1| predicted protein [Naegleria gruberi]
 gi|284086444|gb|EFC40120.1| predicted protein [Naegleria gruberi]
          Length = 356

 Score =  294 bits (753), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 151/327 (46%), Positives = 207/327 (63%), Gaps = 22/327 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ F++K  K Y +++  D R+ IFK N+ RA     L      G+T+FSDLTP EF
Sbjct: 34  QQLFTQFRRKHVKLYGTKQVQDRRYQIFKQNVERARFENYLTERDNMGVTRFSDLTPDEF 93

Query: 117 RRTYLGLRRKLRLPKDAD-------QAP------ILPTNDLPADFDWREKGAVGPVKDQG 163
           +  +L    K   PK A        Q P      +   +D P +FDWRE  AV PVKDQG
Sbjct: 94  KSMFL---MKSYTPKQARELLSGMRQYPANAKLTMKQVSDAPKEFDWREHNAVTPVKDQG 150

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEE-PGSCDSGCNGGLMNS 222
           +CGSCW+FSTTG +EG     TGKL+SLSEQQLVDCDH C   E   +C++GCNGGLM S
Sbjct: 151 NCGSCWTFSTTGNVEGMYAAKTGKLISLSEQQLVDCDHNCVVWEGEKTCNAGCNGGLMWS 210

Query: 223 AFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNG 282
           +FE+ +K GGL+ EE YPY   D  + C+F+ S     ++N++ VS +ED++AA L  NG
Sbjct: 211 SFEHIIKTGGLVTEESYPYEAVD--NRCRFNVSNAVVKISNWTFVSSNEDEMAAWLANNG 268

Query: 283 PLAVAINAVYMQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           P+A+AINA Y+Q Y  G+  P  C    L+HGVL+VGYG    A  ++++  YWI+KNSW
Sbjct: 269 PIAIAINADYLQYYRKGILNPSRCDPEELNHGVLIVGYGEEKAANGKVEK--YWIVKNSW 326

Query: 342 GESWGENGYYKICRGRNVCGVDSMVST 368
             SWGE GY ++ RG+ VCG++++ S+
Sbjct: 327 SASWGEKGYVRVLRGKGVCGLNAVPSS 353


>gi|156546466|ref|XP_001607324.1| PREDICTED: hypothetical protein LOC100123649 [Nasonia vitripennis]
          Length = 1036

 Score =  290 bits (741), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 152/324 (46%), Positives = 202/324 (62%), Gaps = 17/324 (5%)

Query: 54   LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLT 112
            L  E  F  F  K+ K Y ++EE + RF IFK NL      Q+ +  +  +G+TQF+DLT
Sbjct: 725  LKEEILFHEFMGKYKKMYHNKEEKEMRFQIFKDNLNLIEELQRNEMGTGRYGVTQFTDLT 784

Query: 113  PAEFRRTYLGLRRKLRLPKDADQA-PILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
             AEF+  +LGL+  L+   D       +P  +LP+D+DWR    V PVKDQGSCGSCW+F
Sbjct: 785  KAEFKARHLGLKPTLKSENDIPMPMATIPDIELPSDYDWRHHNVVTPVKDQGSCGSCWAF 844

Query: 172  STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
            S TG +EG   +  G+L+SLSEQ+LVDCD           DSGCNGGL ++A+    + G
Sbjct: 845  SVTGNIEGQYAIKHGELLSLSEQELVDCD---------KLDSGCNGGLPDTAYRAIEELG 895

Query: 232  GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
            GL  E DYPY   D    C F+K+K+  ++ +   ++ +E Q+A  LVKNGP+++ INA 
Sbjct: 896  GLELESDYPYDAED--EKCHFNKNKVKVNIVSGLNITSNETQMAQWLVKNGPMSIGINAN 953

Query: 292  YMQTYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
             MQ Y+GGVS P  ++CS   LDHGVL+VGYG   Y PI  K  PYWIIKNSWG  WGE 
Sbjct: 954  AMQFYMGGVSHPFKFLCSPDSLDHGVLIVGYGVKFY-PIFKKTMPYWIIKNSWGPRWGEQ 1012

Query: 349  GYYKICRGRNVCGVDSMVSTVAAA 372
            GYY++ RG   CGV+ MV++   A
Sbjct: 1013 GYYRVYRGDGTCGVNKMVTSAVVA 1036


>gi|144228217|gb|ABO93617.1| papain-like cysteine proteinase [Vitis vinifera]
          Length = 161

 Score =  288 bits (738), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 135/162 (83%), Positives = 147/162 (90%), Gaps = 1/162 (0%)

Query: 195 QLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDK 254
           QLVDCDHECDPEE G+CD GCNGGLM SAFEY LKAGG+ REE YPY G+DRG +CKF+K
Sbjct: 1   QLVDCDHECDPEEYGACDQGCNGGLMTSAFEYILKAGGVEREETYPYIGSDRG-SCKFNK 59

Query: 255 SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGV 314
           S+I ASV+NFSVVSLDEDQIAAN+VKNGPLAV INAV+MQTY+ GVSCPYICSR LDHGV
Sbjct: 60  SQIVASVSNFSVVSLDEDQIAANMVKNGPLAVGINAVFMQTYMKGVSCPYICSRNLDHGV 119

Query: 315 LLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
           +LVGYGSAGYAPIR KEKPYWIIKNSWGESWGE+GY K CRG
Sbjct: 120 VLVGYGSAGYAPIRFKEKPYWIIKNSWGESWGEDGYDKNCRG 161


>gi|383863617|ref|XP_003707276.1| PREDICTED: uncharacterized protein LOC100880620 [Megachile
           rotundata]
          Length = 884

 Score =  288 bits (736), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 153/333 (45%), Positives = 203/333 (60%), Gaps = 22/333 (6%)

Query: 41  EILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP- 99
           ++L   E   ++LL     F  F K +NK Y S +E   R+ +F+ NL+   + +K +  
Sbjct: 565 KMLKMAEDYKDELL-----FEDFVKTYNKTYLSAKEKADRYKVFRKNLKMIEKLRKFEQG 619

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDAD-QAPILPTNDLPADFDWREKGAVGP 158
           +A +G+T F+DLTP EF+  YLGL+  L    D   Q  ++P  DLP  FDWRE  AV P
Sbjct: 620 TAVYGVTMFADLTPEEFKTKYLGLKTNLNQENDIPLQEAVIPDIDLPPKFDWREYNAVTP 679

Query: 159 VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGG 218
           VKDQG CGSCW+FS  G +EG   +   KL+SLSEQ+LVDCD+          D GC GG
Sbjct: 680 VKDQGQCGSCWAFSAIGNIEGQYAIKHKKLLSLSEQELVDCDN---------LDDGCGGG 730

Query: 219 LMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANL 278
            M +A++   K GGL  E DYPY    R   C F K+K    VA+   ++ DE ++A  L
Sbjct: 731 YMINAYKTVEKLGGLELETDYPYDA--RNEKCHFLKNKAKVQVASALNITNDEKKMAQWL 788

Query: 279 VKNGPLAVAINAVYMQTYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYW 335
           VKNGP++V INA  MQ Y GGVS P  ++C    LDHGVL+VGY ++ Y P+  K+ PYW
Sbjct: 789 VKNGPISVGINANAMQFYFGGVSHPFKFLCDPANLDHGVLIVGYATSTY-PLFKKKLPYW 847

Query: 336 IIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           IIKNSWG  WGE GYY++ RG   CGV++M S+
Sbjct: 848 IIKNSWGPKWGEQGYYRVYRGDGTCGVNAMASS 880


>gi|350421176|ref|XP_003492760.1| PREDICTED: hypothetical protein LOC100745708 [Bombus impatiens]
          Length = 884

 Score =  287 bits (735), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 153/324 (47%), Positives = 199/324 (61%), Gaps = 23/324 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAE 115
           E  F  F KKF K Y S +E   RF IFK NL+     Q  +  +A +G+T F+DLTP E
Sbjct: 576 ETLFEAFIKKFGKTYNSADEKLDRFKIFKQNLKIIEELQTFERGTAEYGVTMFADLTPKE 635

Query: 116 FRRTYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           F+  YLGLR +L   K  ++ P+    +P   LP  FDWR+   V PVKDQG CGSCW+F
Sbjct: 636 FKARYLGLRPEL---KHENEIPLPEAEIPDVSLPLKFDWRDHSVVTPVKDQGQCGSCWAF 692

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S TG +EG   +   +L+SLSEQ+LVDCD         S D GCNGG M +A++   + G
Sbjct: 693 SVTGNVEGQYAIKHNQLLSLSEQELVDCD---------SLDEGCNGGDMENAYKAIERLG 743

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  E DYPY   D    C F ++K    V +   ++ DE ++A  LVKNGP++V INA 
Sbjct: 744 GLELESDYPYDAKD--EKCHFLQNKAKVQVVSAVNITSDEKRMAQWLVKNGPISVGINAN 801

Query: 292 YMQTYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            MQ Y GGVS P  ++C+ + LDHGVL+VGYG + Y P+  KE PYWIIKNSWG  WGE 
Sbjct: 802 AMQFYFGGVSHPLNFLCNPKNLDHGVLIVGYGISKY-PLFHKELPYWIIKNSWGPRWGER 860

Query: 349 GYYKICRGRNVCGVDSMVSTVAAA 372
           GYY++ RG   CGV++M ++   A
Sbjct: 861 GYYRVYRGDGTCGVNTMATSAVVA 884


>gi|66803148|ref|XP_635417.1| cysteine proteinase 1 [Dictyostelium discoideum AX4]
 gi|166201987|sp|P04988.2|CYSP1_DICDI RecName: Full=Cysteine proteinase 1; Flags: Precursor
 gi|60463731|gb|EAL61909.1| cysteine proteinase 1 [Dictyostelium discoideum AX4]
          Length = 343

 Score =  283 bits (724), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 152/325 (46%), Positives = 198/325 (60%), Gaps = 17/325 (5%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA------ARHQKLDPSATHGITQ 107
           L  +  F  F+ KFNK Y S EE+  RF IFK+NL +       A + K D     G+ +
Sbjct: 23  LEEQSQFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKAD--TKFGVNK 79

Query: 108 FSDLTPAEFRRTYLGLRRKL---RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGS 164
           F+DL+  EF+  YL  +  +    LP  AD       N +P  FDWR +GAV PVK+QG 
Sbjct: 80  FADLSSDEFKNYYLNNKEAIFTDDLPV-ADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQ 138

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC-DPEEPGSCDSGCNGGLMNSA 223
           CGSCWSFSTTG +EG +F++  KLVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A
Sbjct: 139 CGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNA 198

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGP 283
           + Y +K GG+  E  YPYT  + G  C F+ + I A ++NF+++  +E  +A  +V  GP
Sbjct: 199 YNYIIKNGGIQTESSYPYTA-ETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGP 257

Query: 284 LAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           LA+A +AV  Q YIGGV         LDHG+L+VGY +     I  K  PYWI+KNSWG 
Sbjct: 258 LAIAADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGA 315

Query: 344 SWGENGYYKICRGRNVCGVDSMVST 368
            WGE GY  + RG+N CGV + VST
Sbjct: 316 DWGEQGYIYLRRGKNTCGVSNFVST 340


>gi|1617037|emb|CAA26255.1| cysteine proteinase I precursor [Dictyostelium discoideum]
          Length = 343

 Score =  282 bits (721), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 151/322 (46%), Positives = 197/322 (61%), Gaps = 17/322 (5%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA------ARHQKLDPSATHGITQFSD 110
           +  F  F+ KFNK Y S EE+  RF IFK+NL +       A + K D     G+ +F+D
Sbjct: 26  QSQFLEFQDKFNKKY-SHEEYLERFEIFKSNLGKIEELNLIAINHKAD--TKFGVNKFAD 82

Query: 111 LTPAEFRRTYLGLRRKL---RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGS 167
           L+  EF+  YL  +  +    LP  AD       N +P  FDWR +GAV PVK+QG CGS
Sbjct: 83  LSSDEFKNYYLNNKEAIFTDDLPV-ADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGS 141

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC-DPEEPGSCDSGCNGGLMNSAFEY 226
           CWSFSTTG +EG +F++  KLVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A+ Y
Sbjct: 142 CWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEEACDEGCNGGLQPNAYNY 201

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
            +K GG+  E  YPYT  + G  C F+ + I A ++NF+++  +E  +A  +V  GPLA+
Sbjct: 202 IIKNGGIQTESSYPYTA-ETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPLAI 260

Query: 287 AINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +AV  Q YIGGV         LDHG+L+VGY +     I  K  PYWI+KNSWG  WG
Sbjct: 261 AADAVEWQFYIGGVFDIPCNPNSLDHGILIVGYSAKN--TIFRKNMPYWIVKNSWGADWG 318

Query: 347 ENGYYKICRGRNVCGVDSMVST 368
           E GY  + RG+N CGV + VST
Sbjct: 319 EQGYIYLRRGKNTCGVSNFVST 340


>gi|118483347|gb|ABK93575.1| unknown [Populus trichocarpa]
          Length = 157

 Score =  281 bits (718), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 131/152 (86%), Positives = 144/152 (94%), Gaps = 1/152 (0%)

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV 279
           MN+AFEY LKAGGL RE+DYPYTG DRG ACKF+KSK+AASV+NFSVVSLDEDQIAANLV
Sbjct: 1   MNNAFEYALKAGGLEREKDYPYTGNDRG-ACKFEKSKVAASVSNFSVVSLDEDQIAANLV 59

Query: 280 KNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
           K+GPL+VAINAV+MQTYIGGVSCPYICS+  DHGVLLVGYG+AGYAPIR KEKP+WIIKN
Sbjct: 60  KHGPLSVAINAVFMQTYIGGVSCPYICSKHQDHGVLLVGYGAAGYAPIRFKEKPFWIIKN 119

Query: 340 SWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           SWGE+WGENGYYKICR RN+CGVDSMVSTVAA
Sbjct: 120 SWGENWGENGYYKICRARNICGVDSMVSTVAA 151


>gi|323713078|gb|ADY04293.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713086|gb|ADY04297.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  280 bits (715), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 128/145 (88%), Positives = 142/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+RLKEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRLKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|281209544|gb|EFA83712.1| cysteine proteinase 1 [Polysphondylium pallidum PN500]
          Length = 465

 Score =  279 bits (714), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 156/313 (49%), Positives = 192/313 (61%), Gaps = 20/313 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLR------RAARHQKLDPSATHGITQFSD 110
           E  F  F+ K+NK Y S E +  RF  FK+NL+      R A  +K   S   G+ +F+D
Sbjct: 25  ETQFRQFQIKYNKQYTSSE-YAERFATFKSNLKVIDEKNRDAASRK--SSVRFGVNEFAD 81

Query: 111 LTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           L+ +EFR TYL   + +R P +A  A  LP  DLP  FDWR KGAV  VK+QG CGSCWS
Sbjct: 82  LSQSEFRATYLNSVQAVRDP-NAAVAADLPVEDLPTAFDWRTKGAVTGVKNQGQCGSCWS 140

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGS--CDSGCNGGLMNSAFEYTL 228
           FSTTG +EG  FLA   L  LSEQ LVDCDHEC  E  G   CD GCNGGL  +A+ Y +
Sbjct: 141 FSTTGNVEGQWFLAGNTLTGLSEQNLVDCDHEC-MEYLGDNVCDQGCNGGLQPNAYTYII 199

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 288
           K GG+  E  YPY G D    C F  + I A ++N++ VS +E Q+AA LV NGPLA+A 
Sbjct: 200 KNGGIDTEASYPYQGVD--GTCSFKAANIGAKISNWTYVSSNETQMAAYLVANGPLAIAA 257

Query: 289 NAVYMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
           +AV  Q Y+GGV   P  C   LDHG+L+VGY +     I  K+K YWI+KNSWG +WGE
Sbjct: 258 DAVEWQFYLGGVFDVP--CGNTLDHGILIVGYSAEN--TIFHKDKAYWIVKNSWGATWGE 313

Query: 348 NGYYKICRGRNVC 360
            GY  I RG   C
Sbjct: 314 QGYIYISRGNGEC 326


>gi|323713016|gb|ADY04262.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713018|gb|ADY04263.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713020|gb|ADY04264.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713022|gb|ADY04265.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713024|gb|ADY04266.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713026|gb|ADY04267.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713030|gb|ADY04269.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713032|gb|ADY04270.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713034|gb|ADY04271.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713036|gb|ADY04272.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713038|gb|ADY04273.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713040|gb|ADY04274.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713042|gb|ADY04275.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713044|gb|ADY04276.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713046|gb|ADY04277.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713048|gb|ADY04278.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713050|gb|ADY04279.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713052|gb|ADY04280.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713054|gb|ADY04281.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713056|gb|ADY04282.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713058|gb|ADY04283.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713060|gb|ADY04284.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713062|gb|ADY04285.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713064|gb|ADY04286.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713066|gb|ADY04287.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713068|gb|ADY04288.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713070|gb|ADY04289.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713072|gb|ADY04290.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713074|gb|ADY04291.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713076|gb|ADY04292.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713080|gb|ADY04294.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713084|gb|ADY04296.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713088|gb|ADY04298.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713090|gb|ADY04299.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713092|gb|ADY04300.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713094|gb|ADY04301.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713096|gb|ADY04302.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713098|gb|ADY04303.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713100|gb|ADY04304.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713102|gb|ADY04305.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713104|gb|ADY04306.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713106|gb|ADY04307.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713108|gb|ADY04308.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713110|gb|ADY04309.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713112|gb|ADY04310.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713114|gb|ADY04311.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713116|gb|ADY04312.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713118|gb|ADY04313.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713120|gb|ADY04314.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713122|gb|ADY04315.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713124|gb|ADY04316.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713126|gb|ADY04317.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713128|gb|ADY04318.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713130|gb|ADY04319.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713132|gb|ADY04320.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713134|gb|ADY04321.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713136|gb|ADY04322.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713138|gb|ADY04323.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713140|gb|ADY04324.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713142|gb|ADY04325.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713144|gb|ADY04326.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713146|gb|ADY04327.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713148|gb|ADY04328.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713150|gb|ADY04329.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713152|gb|ADY04330.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713154|gb|ADY04331.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713156|gb|ADY04332.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713158|gb|ADY04333.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713160|gb|ADY04334.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713162|gb|ADY04335.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713166|gb|ADY04337.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713168|gb|ADY04338.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713170|gb|ADY04339.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713172|gb|ADY04340.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713174|gb|ADY04341.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713180|gb|ADY04344.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713182|gb|ADY04345.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713184|gb|ADY04346.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713186|gb|ADY04347.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713188|gb|ADY04348.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713190|gb|ADY04349.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713192|gb|ADY04350.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713194|gb|ADY04351.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713196|gb|ADY04352.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713198|gb|ADY04353.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713200|gb|ADY04354.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713202|gb|ADY04355.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713204|gb|ADY04356.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713206|gb|ADY04357.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713212|gb|ADY04360.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713216|gb|ADY04362.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713218|gb|ADY04363.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713220|gb|ADY04364.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713222|gb|ADY04365.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713224|gb|ADY04366.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713226|gb|ADY04367.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713230|gb|ADY04369.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713232|gb|ADY04370.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713234|gb|ADY04371.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713236|gb|ADY04372.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713238|gb|ADY04373.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713240|gb|ADY04374.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713246|gb|ADY04377.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713248|gb|ADY04378.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713250|gb|ADY04379.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713252|gb|ADY04380.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713254|gb|ADY04381.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713256|gb|ADY04382.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713258|gb|ADY04383.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713260|gb|ADY04384.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713262|gb|ADY04385.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713264|gb|ADY04386.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713266|gb|ADY04387.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713268|gb|ADY04388.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713270|gb|ADY04389.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713274|gb|ADY04391.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713276|gb|ADY04392.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713278|gb|ADY04393.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713280|gb|ADY04394.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713282|gb|ADY04395.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713284|gb|ADY04396.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713286|gb|ADY04397.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713288|gb|ADY04398.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713290|gb|ADY04399.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713292|gb|ADY04400.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713294|gb|ADY04401.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713296|gb|ADY04402.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713298|gb|ADY04403.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713300|gb|ADY04404.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713302|gb|ADY04405.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713304|gb|ADY04406.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713306|gb|ADY04407.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713308|gb|ADY04408.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713310|gb|ADY04409.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713312|gb|ADY04410.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713314|gb|ADY04411.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713316|gb|ADY04412.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713318|gb|ADY04413.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713322|gb|ADY04415.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713324|gb|ADY04416.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713326|gb|ADY04417.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713328|gb|ADY04418.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713330|gb|ADY04419.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713332|gb|ADY04420.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713334|gb|ADY04421.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713336|gb|ADY04422.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713338|gb|ADY04423.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713340|gb|ADY04424.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713342|gb|ADY04425.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713344|gb|ADY04426.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713346|gb|ADY04427.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713348|gb|ADY04428.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713350|gb|ADY04429.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713352|gb|ADY04430.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713354|gb|ADY04431.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713356|gb|ADY04432.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713358|gb|ADY04433.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713360|gb|ADY04434.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713362|gb|ADY04435.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713364|gb|ADY04436.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713366|gb|ADY04437.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713368|gb|ADY04438.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713370|gb|ADY04439.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713372|gb|ADY04440.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713374|gb|ADY04441.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713376|gb|ADY04442.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713378|gb|ADY04443.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713380|gb|ADY04444.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713382|gb|ADY04445.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713384|gb|ADY04446.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713386|gb|ADY04447.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713388|gb|ADY04448.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713390|gb|ADY04449.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713392|gb|ADY04450.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713394|gb|ADY04451.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713396|gb|ADY04452.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713398|gb|ADY04453.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713400|gb|ADY04454.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713402|gb|ADY04455.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713404|gb|ADY04456.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713408|gb|ADY04458.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713410|gb|ADY04459.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713412|gb|ADY04460.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713414|gb|ADY04461.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713416|gb|ADY04462.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713418|gb|ADY04463.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713420|gb|ADY04464.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713422|gb|ADY04465.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713424|gb|ADY04466.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713426|gb|ADY04467.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713428|gb|ADY04468.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713430|gb|ADY04469.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713432|gb|ADY04470.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713434|gb|ADY04471.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713436|gb|ADY04472.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713438|gb|ADY04473.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713440|gb|ADY04474.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713442|gb|ADY04475.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713444|gb|ADY04476.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713448|gb|ADY04478.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713454|gb|ADY04481.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713458|gb|ADY04483.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713460|gb|ADY04484.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713462|gb|ADY04485.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713464|gb|ADY04486.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713466|gb|ADY04487.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713468|gb|ADY04488.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713470|gb|ADY04489.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713474|gb|ADY04491.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713478|gb|ADY04493.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713494|gb|ADY04501.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713496|gb|ADY04502.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713498|gb|ADY04503.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713500|gb|ADY04504.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713502|gb|ADY04505.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713504|gb|ADY04506.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713506|gb|ADY04507.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713508|gb|ADY04508.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713510|gb|ADY04509.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713512|gb|ADY04510.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713514|gb|ADY04511.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713516|gb|ADY04512.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713518|gb|ADY04513.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713520|gb|ADY04514.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713522|gb|ADY04515.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713524|gb|ADY04516.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713526|gb|ADY04517.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713528|gb|ADY04518.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  279 bits (713), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 127/145 (87%), Positives = 142/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713210|gb|ADY04359.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 127/145 (87%), Positives = 142/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDRWGEEGFYKICRGRNICG 144


>gi|323713228|gb|ADY04368.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713242|gb|ADY04375.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713244|gb|ADY04376.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713272|gb|ADY04390.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713446|gb|ADY04477.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713450|gb|ADY04479.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 127/145 (87%), Positives = 141/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG  WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGNKWGEEGFYKICRGRNICG 144


>gi|427777627|gb|JAA54265.1| Putative cathepsin f-like cysteine protease [Rhipicephalus
           pulchellus]
          Length = 475

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 154/313 (49%), Positives = 204/313 (65%), Gaps = 20/313 (6%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH-GITQFSDLTPAEFRR 118
           FS+F + +NK Y  +EEH+ RF IFK NL+R A   +L+    H G+T+FSDL+P+EF R
Sbjct: 166 FSVFARTYNKTYKDKEEHEARFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSPSEFER 225

Query: 119 TYLGLRRKLRLPKDADQAPIL--PTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
            YLGL++ L   K A+  PI   P N+ LP  FDWR KGAV  VK+QG CGSCW+FS TG
Sbjct: 226 HYLGLKKDLAEHK-AEVKPIKVGPVNEPLPDLFDWRTKGAVTEVKNQGMCGSCWAFSVTG 284

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
            +EG  FL+  KL+SLSEQ+LVDCDH          D GC GG M  A +  ++ GGL  
Sbjct: 285 NVEGQWFLSRSKLLSLSEQELVDCDH---------GDHGCKGGYMGQAMKAVIEMGGLET 335

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           E +YPY G D    C+F+K++  A V +F  +  +E ++A  L+K+GP+++ INA  MQ 
Sbjct: 336 ESEYPYKGVD--GTCEFNKTESKARVQSFVGLPQNETELAYWLMKHGPVSIGINANAMQF 393

Query: 296 YIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Y GG+S P  ++CS   LDHGVLLVG+G    +  R K  PYWI+KNSWG+ WGE GYY+
Sbjct: 394 YFGGISHPWKFLCSPTDLDHGVLLVGFGVDKRS-FRRKPVPYWIVKNSWGKYWGEKGYYR 452

Query: 353 ICRGRNVCGVDSM 365
           + RG   CGV+ M
Sbjct: 453 VYRGDGTCGVNQM 465


>gi|323713456|gb|ADY04482.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 127/145 (87%), Positives = 142/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRVKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|313235882|emb|CBY11269.1| unnamed protein product [Oikopleura dioica]
          Length = 371

 Score =  278 bits (711), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 157/326 (48%), Positives = 206/326 (63%), Gaps = 25/326 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   F  F  +  K Y+ QE H  RF  F  NL+R   H  ++  SA +G+T+F+DL+  
Sbjct: 46  ARKQFENFLLEHPKMYSEQESHS-RFQTFWENLKRIKFHNHIEQGSAKYGVTEFADLSDF 104

Query: 115 EFRRTYLGLRRKLRLP-------KDADQAPILP-TNDLPADFDWREKGAVGPVKDQGSCG 166
           EFRR YLGL+ +L++P       K  + +  L     +   FDW EKGAV  VK+QG CG
Sbjct: 105 EFRRHYLGLKPELKIPNRKKYERKSRNSSKKLKFAKTVDETFDWVEKGAVTEVKNQGMCG 164

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FSTTG +EGA F ATG LVSLSEQ+LVDCD +         DSGCNGGLM+ AFE 
Sbjct: 165 SCWAFSTTGNIEGAWFKATGDLVSLSEQELVDCDQK---------DSGCNGGLMDQAFEE 215

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
            ++ GGL  E+ YPY G      C F+KS     + +F  +  DE++IA  L ++GPL++
Sbjct: 216 VIRIGGLETEQQYPYDGVQE--TCNFEKSLSKVQIDDFMDIGEDEEEIAEALEEHGPLSI 273

Query: 287 AINAVYMQTYIGGVSCP--YICSRR-LDHGVLLVGYGSAGYAPIRLKE-KPYWIIKNSWG 342
           AINA  MQ Y GG+S P  ++CS+  LDHGVL+VGYG   +   R +  +PYW IKNSWG
Sbjct: 274 AINAFGMQFYRGGISHPLSFLCSQDGLDHGVLMVGYGVEHHTTWRHRHPRPYWKIKNSWG 333

Query: 343 ESWGENGYYKICRGRNVCGVDSMVST 368
             WGE+GYY++ RG+ VCGV+ MVST
Sbjct: 334 PRWGEDGYYRVARGKGVCGVNKMVST 359


>gi|323713208|gb|ADY04358.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  278 bits (710), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 126/145 (86%), Positives = 142/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYG++GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGTSGYSPVRMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713452|gb|ADY04480.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  278 bits (710), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 126/145 (86%), Positives = 142/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+++KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVKMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713164|gb|ADY04336.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713178|gb|ADY04343.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  277 bits (709), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 126/145 (86%), Positives = 141/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLK GGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKTGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713406|gb|ADY04457.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  277 bits (709), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 126/145 (86%), Positives = 141/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKI ASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIVASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713214|gb|ADY04361.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  277 bits (708), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 126/145 (86%), Positives = 141/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAG LM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGALMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713028|gb|ADY04268.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  277 bits (708), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 126/145 (86%), Positives = 142/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKP+WI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPHWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|323713082|gb|ADY04295.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  276 bits (707), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 126/145 (86%), Positives = 141/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+ +KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVSMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|307200028|gb|EFN80374.1| Putative cysteine proteinase CG12163 [Harpegnathos saltator]
          Length = 1032

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 146/326 (44%), Positives = 201/326 (61%), Gaps = 21/326 (6%)

Query: 54   LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL--RRAARHQKLDPSATHGITQFSDL 111
            + +E  F  F   +N+ YA++EE + R +IF+ NL   R  R  +   +  +G+ QF+D+
Sbjct: 721  MRSERLFENFVNTYNRTYATEEERNLRLSIFRENLGIIRLLRKNEQG-TGQYGVNQFADV 779

Query: 112  TPAEFRRTYLGLRRKLRLPKDAD--QAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
            +  EF   YLGLR  LR   +    QA I P  +LP  FDWR+KGAV PVK+QG CGSCW
Sbjct: 780  STEEFHAFYLGLRPDLRTENNIPLRQAEI-PDIELPNSFDWRQKGAVTPVKNQGMCGSCW 838

Query: 170  SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
            +FS TG +EG   +   KL+SLSEQ+LVDCD           D GCNGGL ++A+    K
Sbjct: 839  AFSVTGNVEGQYAIKHNKLLSLSEQELVDCD---------DLDEGCNGGLPDNAYRAIEK 889

Query: 230  AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
             GGL  E DYPY   +    C F K+     V +   ++ +E QIA  LV NGP+++ IN
Sbjct: 890  LGGLELESDYPYEAEN--ERCHFKKNMAKVQVGSAVNITSNETQIAQWLVANGPISIGIN 947

Query: 290  AVYMQTYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
            A  MQ Y+GGVS P  ++C+ + LDHGVL+VGYG++ Y P+  K+ PYWI+KNSWG+ WG
Sbjct: 948  ANAMQFYMGGVSHPFKFLCNPKNLDHGVLIVGYGTSNY-PLFHKKLPYWIVKNSWGDRWG 1006

Query: 347  ENGYYKICRGRNVCGVDSMVSTVAAA 372
            E GYY++ RG   CG+++M S+    
Sbjct: 1007 EQGYYRVYRGDGTCGLNTMASSAVVV 1032


>gi|323713176|gb|ADY04342.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 125/145 (86%), Positives = 141/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLK GGLM+EEDYPYTGTD+G +CKF+KSKIAA+VANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKTGGLMKEEDYPYTGTDKG-SCKFEKSKIAAAVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|289740839|gb|ADD19167.1| cysteine proteinase cathepsin F [Glossina morsitans morsitans]
          Length = 471

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 152/334 (45%), Positives = 206/334 (61%), Gaps = 21/334 (6%)

Query: 41  EILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP- 99
           E  +H +S +++L   EH F+ F+ KF + Y +  E   RF IFK NL+      + +  
Sbjct: 147 EKKTHKKSNHHNLNKVEHLFAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQG 206

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI--LPTNDLPADFDWREKGAVG 157
           SA +GIT+F+D+T  E+++   GL +  R P+ A   P   +P  DLP +FDWREKGA+ 
Sbjct: 207 SAKYGITEFADMTSPEYKQR-TGLWQ--RDPQKAASNPKAEIPNIDLPKEFDWREKGAIS 263

Query: 158 PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNG 217
            VK+QG+CGSCW+FS TG +EG + + TG L   SEQ+L+DCD         + DS CNG
Sbjct: 264 AVKNQGNCGSCWAFSVTGNIEGLHAVRTGVLEQYSEQELLDCD---------TSDSACNG 314

Query: 218 GLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAN 277
           GL ++A+E   K GGL  E DYPY    R   C F+ +KI   V     +  +E  IA  
Sbjct: 315 GLPDNAYEAIEKIGGLELESDYPYHA--RKDQCHFNSTKIHVKVKGHVDLPKNETAIAQW 372

Query: 278 LVKNGPLAVAINAVYMQTYIGGVSCP--YICSRR-LDHGVLLVGYGSAGYAPIRLKEKPY 334
           L+ NGP+++ INA  MQ Y GGVS P   +CSR+ LDHGVL+VGYG + Y P+  K  PY
Sbjct: 373 LIANGPISIGINANAMQFYRGGVSHPPHILCSRKNLDHGVLIVGYGVSDY-PMFKKTLPY 431

Query: 335 WIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           WI+KNSWG+ WGE GYY++ RG N CGV  M S+
Sbjct: 432 WIVKNSWGKKWGEQGYYRVYRGDNTCGVSEMSSS 465


>gi|332026794|gb|EGI66903.1| Putative cysteine proteinase [Acromyrmex echinatior]
          Length = 774

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/327 (43%), Positives = 204/327 (62%), Gaps = 24/327 (7%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLT 112
           + AE  F+ F   +N+ Y+S E  + RF IF+ NL      ++ +  +  +G+  F+D++
Sbjct: 464 MKAERLFNNFMTTYNRTYSSLE-RNLRFKIFRENLNFIEELRETEQGTGIYGVNMFADMS 522

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSC 168
             EFR  YLGLR  L   +  ++ P+    +P  DLP+ FDWR+KG V PVK+QG CGSC
Sbjct: 523 QKEFRTRYLGLRPDL---QSENEIPLPKAEIPDIDLPSSFDWRQKGVVTPVKNQGQCGSC 579

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           W+FS TG +EG   +  G+L+SLSEQ+LVDCDH          D GCNGGL ++A+    
Sbjct: 580 WAFSVTGNVEGQYAIKHGQLLSLSEQELVDCDH---------LDEGCNGGLPDNAYRAIE 630

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 288
           + GGL  E DYPY   +    C F ++ +   +A+   ++ +E QIA  LV+NGP+A+ I
Sbjct: 631 QLGGLELESDYPYEAEN--EKCHFKQNLVKVELASAVNITSNETQIAQWLVQNGPIAIGI 688

Query: 289 NAVYMQTYIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           NA  MQ Y+GGVS P   +C+   L+HGVL+VGYG++ Y P+  K  PYWIIKNSWG+SW
Sbjct: 689 NANAMQFYMGGVSHPLKILCNPNNLNHGVLIVGYGTSRY-PLFHKNLPYWIIKNSWGKSW 747

Query: 346 GENGYYKICRGRNVCGVDSMVSTVAAA 372
           GE GYY++ RG   CG+++M S+    
Sbjct: 748 GEQGYYRVYRGDGTCGLNTMASSAVVV 774


>gi|323713320|gb|ADY04414.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 144

 Score =  276 bits (705), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 126/145 (86%), Positives = 141/145 (97%), Gaps = 1/145 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVS DEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSHDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICRGRNVCG 361
           IKNSWG+ WGE G+YKICRGRN+CG
Sbjct: 120 IKNSWGDKWGEEGFYKICRGRNICG 144


>gi|405977658|gb|EKC42097.1| Cathepsin F [Crassostrea gigas]
          Length = 715

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 144/316 (45%), Positives = 197/316 (62%), Gaps = 23/316 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F+  F + Y S++E   RF IF  N+R+A + Q ++  +A +G+T+F+D++ +EF++
Sbjct: 418 FQQFQAAFKRLYMSKQEEKTRFKIFCENMRKAKKLQDVEKGTAVYGVTKFADMSESEFKQ 477

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            Y+G        K   +A I   N LP  FDWRE GAV  VK+QGSCGSCW+FSTTG +E
Sbjct: 478 -YVGKVWDQNANKGMKKAKIPEMNSLPNSFDWREHGAVTEVKNQGSCGSCWAFSTTGNIE 536

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G   ++  KLVSLSEQ+LVDCD           D GCNGGL + A++  ++ GGL  E D
Sbjct: 537 GQWAISKKKLVSLSEQELVDCD---------KVDEGCNGGLPSQAYKEIIRLGGLETETD 587

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           Y Y G +    C  DKSKI   +     +S +E ++AA LVKNGP+++ INA  MQ Y+G
Sbjct: 588 YKYRGHNE--KCSMDKSKIRVKINGSVSISSNETEMAAWLVKNGPISIGINAFAMQFYMG 645

Query: 299 GVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           G+S P+   C+ + LDHGVL+VGYG  G        KPYWIIKNSWG  WGE GYY + R
Sbjct: 646 GISHPWKIFCNPKELDHGVLIVGYGVKG-------SKPYWIIKNSWGPDWGEKGYYLVYR 698

Query: 356 GRNVCGVDSMVSTVAA 371
           G  VCG+++M ++   
Sbjct: 699 GAGVCGLNTMCTSAVV 714


>gi|307175778|gb|EFN65613.1| Putative cysteine proteinase CG12163 [Camponotus floridanus]
          Length = 887

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 197/322 (61%), Gaps = 17/322 (5%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH-GITQFSDLTPA 114
           +E  F+ F   +N+ Y++ EE + R  IF+ NL      +K +    H  +  F+D++P 
Sbjct: 578 SEQLFNNFVVTYNRTYSTPEERNLRLRIFRENLGIIQLLRKTERGTAHYDVNMFADMSPE 637

Query: 115 EFRRTYLGLRRKLRLPKDAD-QAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EFR  YLGLR  LR   D   +   +P  +LP  FDWREK  V PVKDQG CGSCW+FS 
Sbjct: 638 EFRSRYLGLRPDLRSENDIPLREAEIPDVELPPKFDWREKSVVTPVKDQGMCGSCWAFSV 697

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TG +EG   +  G+L+SLSEQ+LVDCD           D GCNGGL ++A+    K GGL
Sbjct: 698 TGNIEGQYAIKHGRLLSLSEQELVDCD---------DLDEGCNGGLPDNAYRAIEKLGGL 748

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             E DYPY   +    C F K+     +A+   ++ +E Q+A  LV+NGP+++ INA  M
Sbjct: 749 ELESDYPYEAEN--EKCHFKKNLAKVQLASAVNITSNETQMAQWLVQNGPISIGINANAM 806

Query: 294 QTYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y+GGVS P  ++C+ + LDHGVL+VGYG++ Y P+  K+ PYW IKNSWG+ WGE GY
Sbjct: 807 QFYVGGVSHPFKFLCNPKNLDHGVLIVGYGTSDY-PLFHKKLPYWTIKNSWGKRWGEQGY 865

Query: 351 YKICRGRNVCGVDSMVSTVAAA 372
           Y++ RG   CG++++ ++    
Sbjct: 866 YRVYRGDGTCGLNTLATSAVVV 887


>gi|302794759|ref|XP_002979143.1| hypothetical protein SELMODRAFT_110288 [Selaginella moellendorffii]
 gi|300152911|gb|EFJ19551.1| hypothetical protein SELMODRAFT_110288 [Selaginella moellendorffii]
          Length = 227

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 137/244 (56%), Positives = 178/244 (72%), Gaps = 25/244 (10%)

Query: 136 APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQ 195
           AP+LPT++LP  FDWRE GA+ PVK+QGSCGSCW+FS+TGA+EGA+FL + +L+SL E+Q
Sbjct: 1   APLLPTDNLPKSFDWREHGAMTPVKNQGSCGSCWTFSSTGAVEGAHFLKSRELISLREEQ 60

Query: 196 LVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG------HA 249
           LVDCD           D GC GG M +A+EY +KA GL  EEDYPY   +        H 
Sbjct: 61  LVDCDR---------MDGGCKGGDMLNAYEY-IKAKGLEAEEDYPYQEENYKEYMFPHHR 110

Query: 250 CKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC--S 307
           C F  SK+AA++AN+S VS DEDQIAANLVKNGPL++A+NA Y+  Y+GGV+CP IC   
Sbjct: 111 CHFRPSKVAATIANYSTVSEDEDQIAANLVKNGPLSIALNANYIMDYMGGVACPRICPGG 170

Query: 308 RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
             ++H VLLVGYG  G       +KPYWI+KNSW E++GE+GY+++CRG  VCG+++ VS
Sbjct: 171 DNMNHAVLLVGYGMDG-------DKPYWILKNSWSENYGEDGYFRLCRGFGVCGMNTRVS 223

Query: 368 TVAA 371
           TV+A
Sbjct: 224 TVSA 227


>gi|244790097|ref|NP_001156454.1| cathepsin F isoform 2 precursor [Acyrthosiphon pisum]
          Length = 586

 Score =  274 bits (700), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 148/330 (44%), Positives = 192/330 (58%), Gaps = 14/330 (4%)

Query: 43  LSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SA 101
           L+  ++  +D L  +  F  F    NK Y S EE   RF IF AN+++    Q  +  SA
Sbjct: 263 LTTKKNNIDDRLQLKTDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQGSA 322

Query: 102 THGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKD 161
            +G TQF+DLT  EF++ YLGL   +   K    A I  +  +P +FDWR    V PVK+
Sbjct: 323 IYGATQFADLTKNEFKKKYLGLDSSMTSKKTLPMAVIPQSASIPNEFDWRNHNVVTPVKN 382

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QG+CGSCW+FS    +EG   L + +L+SLSEQ+L+DCD+          D+GC GGLM 
Sbjct: 383 QGACGSCWAFSAIANIEGQYALKSKELLSLSEQELIDCDN---------LDNGCGGGLMT 433

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN 281
            AFE     GGL  E DYPY G      C+  KS +  S++    VS DE+ IA  LVK+
Sbjct: 434 QAFEAVENLGGLETESDYPYEGHADRKGCQLKKSDVKVSISKAVNVSTDEEDIAKFLVKH 493

Query: 282 GPLAVAINAVYMQTYIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIK 338
           GPL+V +NA  MQ Y+GGVS P   +CS + LDHGV +VGYG         K  PYW+IK
Sbjct: 494 GPLSVGVNANAMQFYMGGVSHPIHALCSPKSLDHGVAIVGYG-VHRTKYTHKNLPYWLIK 552

Query: 339 NSWGESWGENGYYKICRGRNVCGVDSMVST 368
           NSWG  WGE GYY + RG   CGV+ MVS+
Sbjct: 553 NSWGPGWGEKGYYLLYRGDGSCGVNQMVSS 582


>gi|260234113|dbj|BAI44279.1| cysteine proteinase inhibitor precursor [Manduca sexta]
 gi|261336196|dbj|BAH59606.2| cysteine proteinase inhibitor precursor [Manduca sexta]
          Length = 2676

 Score =  273 bits (699), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 147/335 (43%), Positives = 205/335 (61%), Gaps = 25/335 (7%)

Query: 45   HHESTNNDL---LGAEHHFSLFKKKFNKAYAS-QEEHDHRFTIFKANLRRAAR---HQKL 97
            +HE+   ++   L AEH F  F   +   Y   + +   RF IFK N+R+      H++ 
Sbjct: 2353 YHEAATAEVYHHLQAEHLFYEFLSTYKPEYIDDRHQMRQRFEIFKENVRKMHELNTHER- 2411

Query: 98   DPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDAD-QAPILPTNDLPADFDWREKGAV 156
              +AT+G+T+F+DLT  EF   ++G++  LR P     +  ++P    P  FDWR+ GAV
Sbjct: 2412 -GTATYGVTRFADLTYEEFSTKHMGMKASLRDPNQVQFRKAVIPNVTAPDSFDWRDHGAV 2470

Query: 157  GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
              VKDQGSCGSCW+FS TG +EG   + TG LVSLSEQ+LVDCD           D GCN
Sbjct: 2471 TGVKDQGSCGSCWAFSVTGNIEGQWKMKTGDLVSLSEQELVDCD---------KLDQGCN 2521

Query: 217  GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
            GGL ++A+    + GGL  E+DYPY G+D    C F+K+     ++    ++ +E  +A 
Sbjct: 2522 GGLPDNAYRAIEQLGGLESEDDYPYEGSD--DKCSFNKTLARVQISGAVNITSNETDMAK 2579

Query: 277  NLVKNGPLAVAINAVYMQTYIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKP 333
             LVK+GP+++ INA  MQ Y+GG+S P+  +C+   LDHGVL+VGYG+  Y P+  K  P
Sbjct: 2580 WLVKHGPISIGINANAMQFYMGGISHPWRMLCNPSNLDHGVLIVGYGAKDY-PLFHKHLP 2638

Query: 334  YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
            YWIIKNSWG SWGE GYY++ RG   CGV+ M S+
Sbjct: 2639 YWIIKNSWGTSWGEQGYYRVYRGDGTCGVNQMASS 2673


>gi|83944664|gb|ABC48936.1| cathepsin F like protease [Glossina morsitans morsitans]
          Length = 471

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/334 (45%), Positives = 205/334 (61%), Gaps = 21/334 (6%)

Query: 41  EILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP- 99
           E  +H +S +++L   EH F+ F+ KF + Y +  E   RF IFK NL+      + +  
Sbjct: 147 EKKTHKKSNHHNLNKVEHLFAKFQIKFKRNYHTTMEKQMRFRIFKQNLQLIEELNRNEQG 206

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI--LPTNDLPADFDWREKGAVG 157
           SA +GIT+F+D+T  E+++   GL +  R P+ A   P   +P  DLP +FDWREKGA+ 
Sbjct: 207 SAKYGITEFADMTSPEYKQR-TGLWQ--RDPQKAASNPKAEIPNIDLPKEFDWREKGAIS 263

Query: 158 PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNG 217
            VK+QG+CGSCW+FS TG +EG + + TG L   SEQ+L+DCD         + DS CNG
Sbjct: 264 AVKNQGNCGSCWAFSVTGNIEGLHAVRTGVLEQYSEQELLDCD---------TSDSACNG 314

Query: 218 GLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAN 277
           GL ++A+E   K GGL  E DYPY    R   C F+ +KI   V     +  +E  IA  
Sbjct: 315 GLPDNAYEAIEKIGGLELESDYPYHA--RKDQCHFNSTKIHVKVKGHVDLPKNETAIAQW 372

Query: 278 LVKNGPLAVAINAVYMQTYIGGVSCP--YICSRR-LDHGVLLVGYGSAGYAPIRLKEKPY 334
           L+ NGP+++ INA  MQ Y GGVS P   +CSR+ LDHGVL+VGY  + Y P+  K  PY
Sbjct: 373 LIANGPISIGINANAMQFYRGGVSHPPHILCSRKNLDHGVLIVGYRVSDY-PMFKKTLPY 431

Query: 335 WIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           WI+KNSWG+ WGE GYY++ RG N CGV  M S+
Sbjct: 432 WIVKNSWGKKWGEQGYYRVYRGDNTCGVSEMSSS 465


>gi|330792958|ref|XP_003284553.1| hypothetical protein DICPUDRAFT_96752 [Dictyostelium purpureum]
 gi|325085467|gb|EGC38873.1| hypothetical protein DICPUDRAFT_96752 [Dictyostelium purpureum]
          Length = 346

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/324 (46%), Positives = 200/324 (61%), Gaps = 22/324 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAAR---HQKLDPSATH-GITQFSDLT 112
           +  F  F++K+NK Y+S  E+  +F  FKANL   A+     KL  S T  G+ +F+DL+
Sbjct: 26  QTQFVAFQQKYNKVYSS-NEYSAKFETFKANLGVIAQLNQKAKLHKSDTKFGVNEFADLS 84

Query: 113 PAEFRRTYLGL---RRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCG 166
            AEFR+ YL     +    LP     AP+L    L   P  FDWR KGAV  VK+QG CG
Sbjct: 85  AAEFRKYYLNAQVAKPDASLP----MAPLLTEEVLETIPTAFDWRTKGAVTGVKNQGQCG 140

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC-DPEEPGSCDSGCNGGLMNSAFE 225
           SCWSFSTTG +EG  +LA   LV LSEQ LVDCDH+C + +   SCD+GC+GGL  +A+ 
Sbjct: 141 SCWSFSTTGNIEGQWYLAGNTLVGLSEQNLVDCDHQCMEYDGQKSCDAGCDGGLQPNAYR 200

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLA 285
           Y ++ GGL  E  YPY     G +CKF    +AA ++NF+++  +E Q+A  L  +GPLA
Sbjct: 201 YVIENGGLDSENSYPYLAV-TGDSCKFKSGNVAAKISNFTMIPQNETQMAGYLATHGPLA 259

Query: 286 VAINAVYMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           +A +A   Q YIGGV   P  C + LDHG+L+VG+ +     I    KPYWI+KNSWG S
Sbjct: 260 IAADAAEWQFYIGGVFDLP--CGQSLDHGILIVGFSAE--KNIFGHLKPYWIVKNSWGAS 315

Query: 345 WGENGYYKICRGRNVCGVDSMVST 368
           WGE GY  + +G+N+CGV   VST
Sbjct: 316 WGEQGYLYLGKGKNLCGVSDFVST 339


>gi|313220237|emb|CBY31096.1| unnamed protein product [Oikopleura dioica]
          Length = 371

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 158/337 (46%), Positives = 203/337 (60%), Gaps = 47/337 (13%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   F  F  +  K Y+ QE H  RF  F  NL+R   H  ++  SA +G+T+F+DL+  
Sbjct: 46  ARKQFENFLLEHPKMYSEQESHS-RFQTFWENLKRIKFHNHIEQGSAKYGVTEFTDLSDF 104

Query: 115 EFRRTYLGLR-------------------RKLRLPKDADQAPILPTNDLPADFDWREKGA 155
           EFRR YLGL+                   +KL+  K AD+            FDW EKGA
Sbjct: 105 EFRRHYLGLKPELKNLNRKKYERKSRNSSKKLKFAKTADET-----------FDWVEKGA 153

Query: 156 VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGC 215
           V  VK+QG CGSCW+FSTTG +EGA F ATG L+SLSEQ+LVDCD +         DSGC
Sbjct: 154 VTEVKNQGMCGSCWAFSTTGNIEGAWFKATGDLISLSEQELVDCDQK---------DSGC 204

Query: 216 NGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIA 275
           NGGLM+ AFE  ++ GGL  E+ YPY G      C F+KS     + +F  +  DE++IA
Sbjct: 205 NGGLMDQAFEEVIRIGGLETEQQYPYDGVQE--TCNFEKSLSKVQIDDFMDIGEDEEEIA 262

Query: 276 ANLVKNGPLAVAINAVYMQTYIGGVSCP--YICSRR-LDHGVLLVGYGSAGYAPIRLKE- 331
             L ++GPL++AINA  MQ Y GGVS P  ++CS   LDHGVL+VGYG   +   R +  
Sbjct: 263 EALEEHGPLSIAINAFGMQFYRGGVSHPLSFLCSPDGLDHGVLMVGYGVEHHTTWRHRHP 322

Query: 332 KPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           +PYW IKNSWG  WGE+GYY++ RG+ VCGV+ MVST
Sbjct: 323 RPYWKIKNSWGPRWGEDGYYRVARGKGVCGVNKMVST 359


>gi|244790093|ref|NP_001156453.1| cathepsin F isoform 1 precursor [Acyrthosiphon pisum]
          Length = 586

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/330 (44%), Positives = 192/330 (58%), Gaps = 14/330 (4%)

Query: 43  LSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SA 101
           L+  ++  +D L  +  F  F    NK Y S EE   RF IF AN+++    Q  +  SA
Sbjct: 263 LTTKKNNIDDRLQLKTDFENFIMTHNKIYTSLEEKSRRFRIFAANMKKVKLLQNHEQGSA 322

Query: 102 THGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKD 161
            +G TQF+DLT  EF++ YLGL   +   K    A I  +  +P +FDWR    V PVK+
Sbjct: 323 IYGATQFADLTKNEFKKKYLGLDSSMTSKKTLPMAVIPQSASIPNEFDWRNHNVVTPVKN 382

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QG+CGSCW+FS    +EG   L + +L+SLSEQ+L+DCD+          D+GC GGLM 
Sbjct: 383 QGACGSCWAFSAIANIEGQYALKSKELLSLSEQELIDCDN---------LDNGCGGGLMT 433

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN 281
            AFE     GGL  E DYPY G      C+  KS +  S++    VS DE+ IA  LVK+
Sbjct: 434 QAFEAVENLGGLETESDYPYEGHADRKGCQLKKSDVKVSISKAVNVSTDEEDIAKFLVKH 493

Query: 282 GPLAVAINAVYMQTYIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIK 338
           GPL+V +NA  MQ Y+GGVS P   +CS + LDHGV +VGYG   Y P      P+W IK
Sbjct: 494 GPLSVGVNANAMQFYMGGVSHPIHALCSPKSLDHGVAIVGYGVHKY-PYLNATLPFWTIK 552

Query: 339 NSWGESWGENGYYKICRGRNVCGVDSMVST 368
           NSWG+ WG  GYY + RG   CGV+ MVS+
Sbjct: 553 NSWGDKWGMQGYYLLYRGDGSCGVNQMVSS 582


>gi|380025691|ref|XP_003696602.1| PREDICTED: putative cysteine proteinase CG12163-like [Apis florea]
          Length = 881

 Score =  271 bits (693), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 152/321 (47%), Positives = 199/321 (61%), Gaps = 17/321 (5%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAE 115
           E  F  F  KFNK ++S  E  +RF IFK NL+     Q  +  +A +G+T F+DLTP E
Sbjct: 573 ETLFEDFIIKFNKTFSSTNEKQNRFQIFKQNLKIIKELQTFEQGTAEYGVTMFADLTPKE 632

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           F+  YLG R +L+   +   A I  ++  LP  FDWR+  AV PVKDQG CGSCW+FS T
Sbjct: 633 FKTRYLGFRPELKQENEIPLAKIEVSDIFLPPKFDWRDYNAVTPVKDQGLCGSCWAFSVT 692

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G +EG   +   KL+SLSEQ+L+DCD         + D GCNGG M +A++   K GGL 
Sbjct: 693 GNVEGQYAIKYKKLLSLSEQELLDCD---------TLDEGCNGGYMENAYKAIEKLGGLE 743

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            E DYPY G  R   C F K      V     ++ +E ++A  L+KNGP+++ INA  MQ
Sbjct: 744 LESDYPYDG--RNEKCHFFKKNAKVQVVGAVNITSNETKMAQWLIKNGPISIGINANAMQ 801

Query: 295 TYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            YIGGVS P  ++C+ + LDHGVL+VGYG + Y P+  KE PYWIIKNSWG  WGENGYY
Sbjct: 802 FYIGGVSHPFHFLCNPKDLDHGVLIVGYGISKY-PLFHKELPYWIIKNSWGSRWGENGYY 860

Query: 352 KICRGRNVCGVDSMVSTVAAA 372
           ++ RG   CGV++M S+   A
Sbjct: 861 RVYRGDGTCGVNAMASSAIVA 881


>gi|223648298|gb|ACN10907.1| Cathepsin F precursor [Salmo salar]
          Length = 474

 Score =  270 bits (690), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 146/321 (45%), Positives = 194/321 (60%), Gaps = 25/321 (7%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSD 110
           +LLG    F  F  ++N+ Y+SQEE D R  +F  NL+ A + Q LD  +A +G+T+FSD
Sbjct: 171 ELLG---QFKEFMVRYNRTYSSQEEADRRLRVFHENLKTAEKLQSLDQGTAEYGVTKFSD 227

Query: 111 LTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           LT  EFR  YL      +  + + +   +P    P  +DWRE GAV PVK+QG CGSCW+
Sbjct: 228 LTEEEFRTLYLNPLLSQQNLQQSMKPAAMPRGPAPPSWDWREHGAVSPVKNQGMCGSCWA 287

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FS TG +EG  F  TGKLVSLSEQ+LVDCD         + D  C GGL ++A+E   K 
Sbjct: 288 FSVTGNIEGQWFAKTGKLVSLSEQELVDCD---------TVDQACGGGLPSNAYEAIEKL 338

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           GGL  E DY YTG  +  +C F   K+ A + +   +S DE++IAA L +NGP++VA+NA
Sbjct: 339 GGLETETDYSYTG--KKQSCDFTTDKVIAYINSSVELSTDENEIAAWLAENGPVSVALNA 396

Query: 291 VYMQTYIGGVSCP---YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
             MQ Y  GVS P   +     +DH VLLVGYG         + KP+W IKNSWGE +GE
Sbjct: 397 FAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYGER-------QGKPFWAIKNSWGEDYGE 449

Query: 348 NGYYKICRGRNVCGVDSMVST 368
            GYY + RG  +CG++ M S+
Sbjct: 450 QGYYYLYRGSRLCGINKMCSS 470


>gi|222637029|gb|EEE67161.1| hypothetical protein OsJ_24244 [Oryza sativa Japonica Group]
          Length = 309

 Score =  270 bits (689), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 150/292 (51%), Positives = 186/292 (63%), Gaps = 26/292 (8%)

Query: 32  IRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA 91
           IRQVTDGG              L  E  F+ F ++  + Y+  EE+  R  +F ANL RA
Sbjct: 29  IRQVTDGGYWPPG---------LLPEAQFAAFVRRHGREYSGPEEYARRLRVFAANLARA 79

Query: 92  ARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR-------RKLRLPKDADQAPILPTNDL 144
           A HQ LDP+A HG+T FSDLT  EF     GL        R+  +P  A  A     + L
Sbjct: 80  AAHQALDPTARHGVTPFSDLTREEFEARLTGLAADVGDDVRRRPMPSAA-PATEEEVSGL 138

Query: 145 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECD 204
           PA FDWR++GAV  VK QG+CGSCW+FSTTGA+EGANFLATG L+ LSEQQLVDCDH CD
Sbjct: 139 PASFDWRDRGAVTDVKMQGACGSCWAFSTTGAVEGANFLATGNLLDLSEQQLVDCDHTCD 198

Query: 205 PEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF 264
            E+   CDSGC GGLM +A+ Y + +GGLM +  YPYTG      C+FD +++A  VANF
Sbjct: 199 AEKKTECDSGCGGGLMTNAYAYLMSSGGLMEQSAYPYTGAQ--GTCRFDANRVAVRVANF 256

Query: 265 SVVSL----DED---QIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR 309
           +VV+     D D   Q+ A LV++GPLAV +NA YMQTY+GGVSCP +C  R
Sbjct: 257 TVVAPPGGNDGDGDAQMRAALVRHGPLAVGLNAAYMQTYVGGVSCPLVCRAR 308


>gi|213513816|ref|NP_001133678.1| Cathepsin F precursor [Salmo salar]
 gi|209154908|gb|ACI33686.1| Cathepsin F precursor [Salmo salar]
          Length = 475

 Score =  269 bits (688), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 148/322 (45%), Positives = 198/322 (61%), Gaps = 27/322 (8%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSD 110
           +LLG    F  F  ++N+ Y+SQE+ D R  IF  NL+ A + Q LD  +A +G+T+FSD
Sbjct: 172 ELLG---QFKEFMVRYNRTYSSQEDTDRRLRIFHENLKTAEKLQSLDLGTAEYGVTKFSD 228

Query: 111 LTPAEFRRTYLG-LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           LT  EFR  YL  L  + +L +    A  +P    P  +DWRE GAV PVK+QG CGSCW
Sbjct: 229 LTEEEFRTLYLNPLLSQQKLQRSMKPAA-MPHGPAPPSWDWREHGAVSPVKNQGMCGSCW 287

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS TG +EG  F+ TGKLVSLSEQ+LVDCD         + D  C GGL ++A+E   K
Sbjct: 288 AFSVTGNIEGQWFVKTGKLVSLSEQELVDCD---------TADQACGGGLPSNAYEAIEK 338

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GG+  E DY YTG  +  +C F   K+ A + +   +S DE++IAA L +NGP++VA+N
Sbjct: 339 LGGVETETDYSYTG--KKQSCDFTTDKVTAYINSSVELSKDENEIAAWLAENGPVSVALN 396

Query: 290 AVYMQTYIGGVSCP---YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A  MQ Y  GVS P   +     +DH VLLVGYG         + KP+W IKNSWGE +G
Sbjct: 397 AFAMQFYRKGVSHPLKIFCNPWMIDHAVLLVGYGER-------QGKPFWAIKNSWGEDYG 449

Query: 347 ENGYYKICRGRNVCGVDSMVST 368
           E GYY + RG  +CG+++M S+
Sbjct: 450 EQGYYYLYRGSRLCGINTMCSS 471


>gi|67773378|gb|AAY81946.1| cysteine protease 8 [Paragonimus westermani]
          Length = 325

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/317 (45%), Positives = 197/317 (62%), Gaps = 27/317 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+ + KAYA++++   RF IFK NL RA ++Q  +  +A +G+TQFSDLTP 
Sbjct: 28  ARELYEQFKRDYGKAYANEDDQ-KRFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLTPE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EF   YLGLR    + +  D+  +      PA  DWREKGAVGP+++QGSCGSCW+FS  
Sbjct: 87  EFEAKYLGLR----IDEQVDRVQLNDLQTAPASVDWREKGAVGPIENQGSCGSCWAFSVV 142

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G +EG  FL TG LVSLS+QQLVDCD         + D+GC GG     ++   + GGL 
Sbjct: 143 GNIEGQWFLKTGYLVSLSKQQLVDCD---------TVDNGCYGGYPPYTYKEIKRMGGLE 193

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            + DYPYTG   GH C+ D+SK+ A + +  V+  DE++ AA L ++GP++  +NA Y+Q
Sbjct: 194 LQSDYPYTGW--GHGCRLDRSKLFAKIDDSIVLEADEEKQAAWLAEHGPMSTCLNAKYLQ 251

Query: 295 TYIGGVSCP--YICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Y  G+  P   +CS   L+H VL VGY +           PYWIIKNSWG SWGE+GY+
Sbjct: 252 FYQSGILHPSKAMCSPEGLNHAVLTVGYDTK-------HGIPYWIIKNSWGTSWGEDGYF 304

Query: 352 KICRGRNVCGVDSMVST 368
           +I RG   CG+D + ++
Sbjct: 305 RIYRGDGTCGIDRLTTS 321


>gi|156389068|ref|XP_001634814.1| predicted protein [Nematostella vectensis]
 gi|156221901|gb|EDO42751.1| predicted protein [Nematostella vectensis]
          Length = 276

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 142/294 (48%), Positives = 192/294 (65%), Gaps = 28/294 (9%)

Query: 81  FTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYL--GLRRKLRLPKDADQAP 137
             IF++N+R+AA+ QK+D  +A +G T FSDL+  EFR+  +  G  + L   KDA+   
Sbjct: 1   MKIFESNMRKAAKMQKMDSGTAQYGPTIFSDLSEEEFRKQKMMPGWGKPLYEMKDAE--- 57

Query: 138 ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLV 197
            +P  D+P   DWR+KG V PVK+QGSCGSCW+FSTTG +EG   + TGKLVSLSEQ+LV
Sbjct: 58  -IPLGDIPESVDWRDKGVVTPVKNQGSCGSCWAFSTTGNIEGQYAIKTGKLVSLSEQELV 116

Query: 198 DCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI 257
           DCD         + D GC GGL ++A++   K GGL  E DYPY G D    CKF+K+++
Sbjct: 117 DCD---------TIDKGCEGGLPSNAYKQIEKLGGLESESDYPYKGAD--SKCKFNKAEV 165

Query: 258 AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICS-RRLDHGV 314
             ++ +  V+S DE +IAA L KNGP+++ INA  MQ Y+GG++ P+   C+   L+HGV
Sbjct: 166 KVTINSSVVISKDEKEIAAWLAKNGPISIGINANAMQFYMGGIAHPWKIFCNPSSLNHGV 225

Query: 315 LLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           L+VGYG            PYWIIKNSWG SWGE GYY I RG   CG+++M ++
Sbjct: 226 LIVGYGVK-------NGTPYWIIKNSWGPSWGEKGYYLIYRGGGCCGLNTMCTS 272


>gi|328788558|ref|XP_392381.3| PREDICTED: putative cysteine proteinase CG12163-like [Apis
           mellifera]
          Length = 881

 Score =  268 bits (684), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 150/321 (46%), Positives = 198/321 (61%), Gaps = 17/321 (5%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAE 115
           E  F  F  KFNK ++S  E  +RF IFK NL+     Q  +  +A +G+T F+DLTP E
Sbjct: 573 EMLFEDFIIKFNKTFSSTNEKQNRFQIFKQNLKIINELQTFEQGTAEYGVTMFADLTPKE 632

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           F+  YLG R +L+   +   A I  ++  LP  FDWR+   V PVKDQG CGSCW+FS T
Sbjct: 633 FKTRYLGFRPELKQENEIPLAKIEVSDIFLPLKFDWRDYNVVTPVKDQGLCGSCWAFSVT 692

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G +EG   +   KL+SLSEQ+L+DCD         + D GCNGG M +A++   K GGL 
Sbjct: 693 GNVEGQYAIKYKKLLSLSEQELLDCD---------TLDEGCNGGYMENAYKAIEKLGGLE 743

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            E DYPY G  R   C F K      V     ++ +E ++A  L+KNGP+++ INA  MQ
Sbjct: 744 LESDYPYDG--RNEKCHFFKKNAKVQVVGAVNITSNETKMAQWLIKNGPISIGINANAMQ 801

Query: 295 TYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            YIGGVS P  ++C+ + LDHGVL+VGYG + Y P+  K+ PYWIIKNSWG  WGENGYY
Sbjct: 802 FYIGGVSHPFHFLCNPKDLDHGVLIVGYGISKY-PLFHKKLPYWIIKNSWGSRWGENGYY 860

Query: 352 KICRGRNVCGVDSMVSTVAAA 372
           ++ RG   CGV++M S+   A
Sbjct: 861 RVYRGDGTCGVNAMASSAIVA 881


>gi|324522685|gb|ADY48108.1| Cathepsin L, partial [Ascaris suum]
          Length = 308

 Score =  267 bits (682), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 146/315 (46%), Positives = 195/315 (61%), Gaps = 29/315 (9%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYL 121
           F  ++N+ Y++++E   RF I+K NLR A   Q  +  +A +G TQFSDLT AEFR+  L
Sbjct: 10  FIGRYNRTYSNKKEMLKRFRIYKRNLRAAKIWQANEQGTAIYGETQFSDLTQAEFRKIML 69

Query: 122 GLRRKLRLPKDADQAPI-----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
               K   PK  ++        +  ND+P  FDWREK AV  VK+QGSCGSCW+FS TG 
Sbjct: 70  PY--KWETPKVPNKMANFKEFGIAQNDIPESFDWREKNAVTEVKNQGSCGSCWAFSVTGN 127

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EGA  + T KLVSLSEQ+LVDCD           D GCNGGL ++A+   ++ GGL  E
Sbjct: 128 IEGAWAIKTSKLVSLSEQELVDCD---------IIDQGCNGGLPSNAYREIIRMGGLEAE 178

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTY 296
            DYPY G  RG  C   K  IA  + +   +  DE+++AA LV  GP+++ +NA  +Q Y
Sbjct: 179 SDYPYDG--RGEKCHLMKKDIAVYINDSLQLPHDEEKMAAWLVAKGPISIGLNANPLQFY 236

Query: 297 IGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
             G++ P+   CS + LDHGVL+VGYGS         +KPYWIIKNSWG  WGE GY+++
Sbjct: 237 RHGIAHPWRVFCSPKHLDHGVLIVGYGSE-------TDKPYWIIKNSWGTKWGEEGYFRL 289

Query: 354 CRGRNVCGVDSMVST 368
            RG+NVCG+  M +T
Sbjct: 290 FRGKNVCGIQEMATT 304


>gi|323713472|gb|ADY04490.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713476|gb|ADY04492.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713480|gb|ADY04494.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713482|gb|ADY04495.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713484|gb|ADY04496.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713486|gb|ADY04497.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713488|gb|ADY04498.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713490|gb|ADY04499.1| cysteine protease [Clarkia xantiana var. xantiana]
 gi|323713492|gb|ADY04500.1| cysteine protease [Clarkia xantiana var. xantiana]
          Length = 138

 Score =  266 bits (681), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 122/139 (87%), Positives = 136/139 (97%), Gaps = 1/139 (0%)

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLMNSAFEYTLKAGGLM+EEDYPYTGTD+G +CKF+KSKIAASVANFSVVSLDEDQIAA
Sbjct: 1   GGLMNSAFEYTLKAGGLMKEEDYPYTGTDKG-SCKFEKSKIAASVANFSVVSLDEDQIAA 59

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           NLVKNGPLA+AINAV+MQTY+GGVSCPYICS+RLDHGVLLVGYGS+GY+P+R+KEKPYWI
Sbjct: 60  NLVKNGPLAIAINAVFMQTYMGGVSCPYICSKRLDHGVLLVGYGSSGYSPVRMKEKPYWI 119

Query: 337 IKNSWGESWGENGYYKICR 355
           IKNSWG+ WGE G+YKICR
Sbjct: 120 IKNSWGDKWGEEGFYKICR 138


>gi|66803062|ref|XP_635374.1| cysteine protease [Dictyostelium discoideum AX4]
 gi|60463697|gb|EAL61879.1| cysteine protease [Dictyostelium discoideum AX4]
          Length = 352

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 147/332 (44%), Positives = 200/332 (60%), Gaps = 30/332 (9%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQK----LDPSATHGITQFSDLT 112
           E  F  F+ K+NK Y S EE+  +F  FK+NL       K    +      G+ +F+DL+
Sbjct: 24  ESQFIAFQNKYNKIY-SAEEYLVKFETFKSNLLNIDALNKQATTIGSDTKFGVNKFADLS 82

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILP--TNDL----PADFDWREKGA---------VG 157
             EF++ YL   ++ RL    D  P+LP  ++D+    PA FDWR  G          V 
Sbjct: 83  KEEFKKYYLS-SKEARL---TDDLPMLPNLSDDIISATPAAFDWRNTGGSTKFPQGTPVT 138

Query: 158 PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC-DPEEPGSCDSGCN 216
            VK+QG CGSCWSFSTTG +EG ++L+TG LV LSEQ LVDCDH C   E    C++GC+
Sbjct: 139 AVKNQGQCGSCWSFSTTGNVEGQHYLSTGTLVGLSEQNLVDCDHTCMTYENENVCNAGCD 198

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGL  +A+ Y +K GG+  E  YPYT  D    CKF+ +++ A +++F++V  +E QIA+
Sbjct: 199 GGLQPNAYNYIIKNGGIQTEATYPYTAVD--GECKFNSAQVGAKISSFTMVPQNETQIAS 256

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
            L  NGPLA+A +A   Q Y+GGV   + C + LDHG+L+VGYG+     I  K  PYWI
Sbjct: 257 YLFNNGPLAIAADAEEWQFYMGGV-FDFPCGQTLDHGILIVGYGAQD--TIVGKNTPYWI 313

Query: 337 IKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           IKNSWG  WGE GY K+ R  + CGV + VS+
Sbjct: 314 IKNSWGADWGEAGYLKVERNTDKCGVANFVSS 345


>gi|290984408|ref|XP_002674919.1| predicted protein [Naegleria gruberi]
 gi|284088512|gb|EFC42175.1| predicted protein [Naegleria gruberi]
          Length = 353

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 137/339 (40%), Positives = 208/339 (61%), Gaps = 20/339 (5%)

Query: 42  ILSHHESTNNDL--LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP 99
           IL+  + T   L       HF  F +KF + Y   EE+++R  +F+ N+  + R    + 
Sbjct: 17  ILAFDQETYQPLSETAVRDHFLDFTRKFQRFYKGPEEYEYRLKVFRENIETSRRMNIREG 76

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL---------PADFDW 150
           +  +GIT+FSDLT  EFR+ YL  ++    PK+  +   + +N +         P  +DW
Sbjct: 77  NNNYGITKFSDLTSDEFRKFYLMEKKT---PKEIQKMMRMDSNKMVSNSYAKPAPDHYDW 133

Query: 151 REKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP-EEPG 209
           R  GA+  VKDQG CGSCW+FS  G++EG+  +   +LVS SEQQLVDCD+ C   E   
Sbjct: 134 RNHGAITGVKDQGQCGSCWAFSAIGSIEGSYAIKHKQLVSFSEQQLVDCDNNCVTFENQQ 193

Query: 210 SCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL 269
           SCD GCNGGL  SA++Y +KAGG++ E+DYPY      + C+   +   A ++N++++S 
Sbjct: 194 SCDDGCNGGLQWSAYQYLMKAGGVVTEKDYPYYA--ERYKCEVKPANFVAKLSNWTMLST 251

Query: 270 DEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIR 328
           +E ++A  L +NGP+AVA+NA ++Q Y  G++ P  C   +LDHGVL+VGYG   +    
Sbjct: 252 NETEMANWLAENGPIAVALNADFLQNYNNGIADPAWCDPTQLDHGVLIVGYGLETF--WF 309

Query: 329 LKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
            K +PYWI+KNSWG  +GE+GY++I +G   CG++++ S
Sbjct: 310 GKPQPYWIVKNSWGYDFGEDGYFRIVKGVGRCGINTVPS 348


>gi|427778331|gb|JAA54617.1| Putative cysteine proteinase cathepsin f [Rhipicephalus pulchellus]
          Length = 361

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 154/331 (46%), Positives = 204/331 (61%), Gaps = 38/331 (11%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH-GITQFSDLTPAEFRR 118
           FS+F + +NK Y  +EEH+ RF IFK NL+R A   +L+    H G+T+FSDL+P+EF R
Sbjct: 34  FSVFARTYNKTYKDKEEHEARFMIFKNNLKRIALFNRLEEGTAHYGLTEFSDLSPSEFER 93

Query: 119 TYLGLRRKLRLPKDADQAPIL--PTND-LPADFDWREKGAVGPVKDQGSCGSCWS----- 170
            YLGL++ L   K A+  PI   P N+ LP  FDWR KGAV  VK+QG CGSCW+     
Sbjct: 94  HYLGLKKDLAEHK-AEVKPIKVGPVNEPLPDLFDWRTKGAVTEVKNQGMCGSCWAFSXXT 152

Query: 171 -------------FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNG 217
                        FS TG +EG  FL+  KL+SLSEQ+LVDCDH          D GC G
Sbjct: 153 EVKNQGMCGSCWAFSVTGNVEGQWFLSRSKLLSLSEQELVDCDH---------GDHGCKG 203

Query: 218 GLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAN 277
           G M  A +  ++ GGL  E +YPY G D    C+F+K++  A V +F  +  +E ++A  
Sbjct: 204 GYMGQAMKAVIEMGGLETESEYPYKGVD--GTCEFNKTESKARVQSFVGLPQNETELAYW 261

Query: 278 LVKNGPLAVAINAVYMQTYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPY 334
           L+K+GP+++ INA  MQ Y GG+S P  ++CS   LDHGVLLVG+G    +  R K  PY
Sbjct: 262 LMKHGPVSIGINANAMQFYFGGISHPWKFLCSPTDLDHGVLLVGFGVDKRS-FRRKPVPY 320

Query: 335 WIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
           WI+KNSWG+ WGE GYY++ RG   CGV+ M
Sbjct: 321 WIVKNSWGKYWGEKGYYRVYRGDGTCGVNQM 351


>gi|224555777|gb|ACN56478.1| cathepsin F [Paralichthys olivaceus]
          Length = 475

 Score =  266 bits (679), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 152/328 (46%), Positives = 194/328 (59%), Gaps = 39/328 (11%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSD 110
           +LLG    F  F  K+NK Y+SQ+E D R +IF  NL+ A + Q LD  SA +G+T+FSD
Sbjct: 172 ELLG---QFKEFMVKYNKVYSSQDEADRRLSIFHENLKTAEKLQSLDQGSAEYGVTKFSD 228

Query: 111 LTPAEFRRTYLG-------LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQG 163
           LT  EFR TYL        L R ++ P    + P       PA +DWR+ GAV  VK+QG
Sbjct: 229 LTEEEFRSTYLNPLLSQWTLHRPMK-PASPAKGPA------PASWDWRDHGAVSSVKNQG 281

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCW+FS TG +EG  FL  G LVSLSEQ+LVDCD           D  CNGGL ++A
Sbjct: 282 MCGSCWAFSVTGNIEGQWFLKNGTLVSLSEQELVDCD---------GLDQACNGGLPSNA 332

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGP 283
           +E   K GGL  E DY Y G  +  +C F   K+AA + +   +S DE +IAA L +NGP
Sbjct: 333 YEAIEKLGGLETETDYSYIG--KKQSCDFATKKVAAYINSSVELSKDEKEIAAWLAENGP 390

Query: 284 LAVAINAVYMQTYIGGVSCP---YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           ++VA+NA  MQ Y  GVS P   +     +DH VL+VGYG         K  P+W IKNS
Sbjct: 391 VSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLMVGYGER-------KGIPFWAIKNS 443

Query: 341 WGESWGENGYYKICRGRNVCGVDSMVST 368
           WGE +GE GYY + RG N CG++ M S+
Sbjct: 444 WGEDYGEQGYYNLYRGSNACGINKMCSS 471


>gi|186688051|gb|ACC86111.1| cathepsin F [Paralichthys olivaceus]
          Length = 475

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 152/328 (46%), Positives = 194/328 (59%), Gaps = 39/328 (11%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSD 110
           +LLG    F  F  K+NK Y+SQ+E D R +IF  NL+ A + Q LD  SA +G+T+FSD
Sbjct: 172 ELLG---QFKEFMVKYNKVYSSQDEADRRLSIFHENLKTAEKLQSLDQGSAEYGVTKFSD 228

Query: 111 LTPAEFRRTYLG-------LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQG 163
           LT  EFR TYL        L R ++ P    + P       PA +DWR+ GAV  VK+QG
Sbjct: 229 LTEEEFRSTYLNPLLSQWTLHRPMK-PASPAKGPA------PASWDWRDHGAVSSVKNQG 281

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCW+FS TG +EG  FL  G LVSLSEQ+LVDCD           D  CNGGL ++A
Sbjct: 282 MCGSCWAFSVTGNIEGQWFLKNGTLVSLSEQELVDCD---------GLDQACNGGLPSNA 332

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGP 283
           +E   K GGL  E DY Y G  +  +C F   K+AA + +   +S DE +IAA L +NGP
Sbjct: 333 YEAIEKLGGLETETDYSYIG--KKQSCDFATKKVAAYINSSVELSKDEKEIAAWLAENGP 390

Query: 284 LAVAINAVYMQTYIGGVSCP---YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           ++VA+NA  MQ Y  GVS P   +     +DH VL+VGYG         K  P+W IKNS
Sbjct: 391 VSVALNAFAMQFYRKGVSHPLKIFCNPWMIDHAVLMVGYGER-------KGIPFWAIKNS 443

Query: 341 WGESWGENGYYKICRGRNVCGVDSMVST 368
           WGE +GE GYY + RG N CG++ M S+
Sbjct: 444 WGEDYGEQGYYYLHRGSNACGINKMCSS 471


>gi|328866896|gb|EGG15279.1| cysteine protease [Dictyostelium fasciculatum]
          Length = 347

 Score =  265 bits (676), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/323 (45%), Positives = 188/323 (58%), Gaps = 20/323 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA----ARHQKLDPSATHGITQFSDLT 112
           E  F  F+ K+NK Y S E    +F  FK NL R     A           G+ +F+DL+
Sbjct: 24  EIQFRDFQVKYNKVYGSHE-FSQKFVTFKDNLNRIDTLNANAAASGSDTKFGVNEFADLS 82

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCW 169
             EFR+ Y+       +P DA  A       L   P+ FDWR KGAV PVK+QG CGSCW
Sbjct: 83  VQEFRKFYMN-AVPASVPSDAQVAGDYSDETLASIPSSFDWRTKGAVTPVKNQGQCGSCW 141

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC---DPEEPGSCDSGCNGGLMNSAFEY 226
           SFSTTG +EG  FLA   L  LSEQ LVDCDH C   D ++  SCD GCNGGL  +AF+Y
Sbjct: 142 SFSTTGNVEGQWFLAGNTLTGLSEQNLVDCDHHCMTYDGQQ--SCDDGCNGGLQPNAFQY 199

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
            +  GG+  E  YPY    +   C+F  S I A ++N+ ++S +E QIAA L  NGP+++
Sbjct: 200 IIGNGGIDTETSYPYLAVAQ-DKCQFKASNIGAKISNWQMLSTNETQIAAYLALNGPVSI 258

Query: 287 AINAVYMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           A +A   Q YIGGV   P  C + LDHG+L+VGY +     I    KPYW +KNSWG SW
Sbjct: 259 AADAAEWQFYIGGVFDLP--CGKALDHGILIVGYDTE--TNIFGHAKPYWWVKNSWGASW 314

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE GY K+ RG   CG+++ VST
Sbjct: 315 GEQGYLKVLRGAGECGLNTFVST 337


>gi|371781479|emb|CCA95098.1| putative responsive to dehydration 19, partial [Liriodendron
           tulipifera]
          Length = 150

 Score =  265 bits (676), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 125/151 (82%), Positives = 138/151 (91%), Gaps = 2/151 (1%)

Query: 207 EPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV 266
           +P SCD+GCNGGLM SAF+YTLK+GGL +EEDYPYTG D G  CKF+KSKIAAS  N++V
Sbjct: 1   DPSSCDAGCNGGLMTSAFKYTLKSGGLEKEEDYPYTGKD-GATCKFEKSKIAASALNYTV 59

Query: 267 VSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYA 325
           VS+DEDQIAANLVK GPLAV INAV+MQTYIGGVSCPYICS+R LDHGVLLVGYG+AGYA
Sbjct: 60  VSIDEDQIAANLVKFGPLAVGINAVFMQTYIGGVSCPYICSKRLLDHGVLLVGYGAAGYA 119

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
           PIR K+KPYWIIKNSWGESWGENGYYKICRG
Sbjct: 120 PIRFKDKPYWIIKNSWGESWGENGYYKICRG 150


>gi|403183546|gb|EJY58173.1| AAEL017153-PA [Aedes aegypti]
          Length = 1165

 Score =  264 bits (675), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 143/328 (43%), Positives = 194/328 (59%), Gaps = 27/328 (8%)

Query: 56   AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
            A H F  FK K ++ Y S  EH+ RF IFK NL +  +  K +  +A +GIT F+D+T A
Sbjct: 854  ARHLFEKFKLKHSREYQSTLEHEMRFRIFKNNLFKIEQLNKYEQGTAKYGITHFADMTSA 913

Query: 115  EFRRTYLGLRRKLRLPKDAD-------QAPILPTNDLPADFDWREKGAVGPVKDQGSCGS 167
            E+R+     R  L +P+D D       +A I    +LP  FDWRE GAV PVK+QG+CGS
Sbjct: 914  EYRQ-----RTGLVIPRDEDRNHVGNPKAEIDENMELPESFDWRELGAVSPVKNQGNCGS 968

Query: 168  CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
            CW+FS  G +EG + + T  L   SEQ+L+DCD         + DS C GG M+ A++  
Sbjct: 969  CWAFSVVGNIEGLHQIKTKVLEEYSEQELLDCD---------AVDSACQGGYMDDAYKAI 1019

Query: 228  LKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
             K GGL  E +YPY    +   C F+ +++   V     +  +E  +A  LV NGP+++ 
Sbjct: 1020 EKIGGLELESEYPYLA-KKQKTCHFNSTEVHVRVKGAVDLPKNETAMAQYLVANGPISIG 1078

Query: 288  INAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
            +NA  MQ Y GG+S P+  +CS++ LDHGVL+VGYG   Y P+  K  PYWI+KNSWG  
Sbjct: 1079 LNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEY-PMFNKTMPYWIVKNSWGPK 1137

Query: 345  WGENGYYKICRGRNVCGVDSMVSTVAAA 372
            WGE GYY+I RG N CGV  M S+   A
Sbjct: 1138 WGEQGYYRIFRGDNTCGVSEMASSAVLA 1165


>gi|242014216|ref|XP_002427787.1| Cathepsin F precursor, putative [Pediculus humanus corporis]
 gi|212512256|gb|EEB15049.1| Cathepsin F precursor, putative [Pediculus humanus corporis]
          Length = 434

 Score =  264 bits (675), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 139/315 (44%), Positives = 192/315 (60%), Gaps = 20/315 (6%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEF 116
             F  F  KFNK Y S+EE   RF IF+AN+++     K +  +A +GIT+FSDL+  EF
Sbjct: 132 QSFKDFVLKFNKVYFSKEEFKKRFRIFRANMKKINFLNKAEKGTAQYGITEFSDLSVTEF 191

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           +  YLGL++K   P+       +P   LP +FDWR   AV PVK+QGSCGSCW+FS TG 
Sbjct: 192 K-NYLGLKKK---PESKLPTAEIPDVKLPDNFDWRHYNAVTPVKNQGSCGSCWAFSVTGN 247

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG   +   +L+SLSEQ+L+DCD           D+GCNGG M   +E  +K GGL  E
Sbjct: 248 IEGLWAIKKHELLSLSEQELIDCD---------KIDNGCNGGYMPETYEAIMKLGGLETE 298

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTY 296
            DYPY   +    C  +K++I   +     ++  E  IA  L KNGP++  +NA  MQ Y
Sbjct: 299 TDYPYEAEN--EKCNLNKTEIKVKINGAVNLTKSELDIAKWLYKNGPVSAGLNANAMQFY 356

Query: 297 IGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           +GG+S P   +C+    DHG+L+VGYG    + ++ +  PYWIIKNSWG+ WGE GYY++
Sbjct: 357 LGGISHPPKILCNPEEQDHGILIVGYGIHKSSILK-RTIPYWIIKNSWGKHWGEKGYYRL 415

Query: 354 CRGRNVCGVDSMVST 368
            RG  VCG++ MVS+
Sbjct: 416 YRGSGVCGINQMVSS 430


>gi|170032975|ref|XP_001844355.1| conserved hypothetical protein [Culex quinquefasciatus]
 gi|167873312|gb|EDS36695.1| conserved hypothetical protein [Culex quinquefasciatus]
          Length = 1454

 Score =  264 bits (675), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 145/337 (43%), Positives = 198/337 (58%), Gaps = 30/337 (8%)

Query: 44   SHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SAT 102
            +HH S + D   + H F  FK + N+ Y S  EH+ RF IFK NL +  +  K +  +A 
Sbjct: 1132 AHHYSKSED--HSRHLFDKFKTRHNRTYQSSLEHEMRFRIFKNNLFKIEQLNKYEQGTAK 1189

Query: 103  HGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQ--------APILPTNDLPADFDWREKG 154
            +GIT F+D+T AE+R      R  L +P++ D+        A I    +LP  FDWRE G
Sbjct: 1190 YGITHFADMTSAEYR-----ARTGLVVPREGDEVNHIRNPMAEIDEHMELPDAFDWRELG 1244

Query: 155  AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 214
            AV  VK+QG+CGSCW+FS  G +EG + + T KL   SEQ+L+DCD         + DS 
Sbjct: 1245 AVSEVKNQGNCGSCWAFSVVGNIEGLHQVKTKKLEEYSEQELLDCD---------TVDSA 1295

Query: 215  CNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQI 274
            CNGG M+ A++   K GGL  E +YPY    +   C F+K+     V     +  +E  I
Sbjct: 1296 CNGGFMDDAYKAIEKIGGLELESEYPYLAK-KQKTCHFNKTMAHVRVKGAVDLPKNETAI 1354

Query: 275  AANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKE 331
            A  LV NGP+++ +NA  MQ Y GG+S P+  +CS++ LDHGVL+VGYG   Y P+  K 
Sbjct: 1355 AQFLVANGPVSIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEY-PMFNKT 1413

Query: 332  KPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
             PYWI+KNSWG  WGE GYY++ RG N CGV  M ++
Sbjct: 1414 LPYWIVKNSWGPKWGEQGYYRVFRGDNTCGVSEMATS 1450


>gi|401758208|gb|AFQ01139.1| cathepsin F-like protease, partial [Chilo suppressalis]
          Length = 537

 Score =  263 bits (672), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 194/325 (59%), Gaps = 23/325 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQE-EHDHRFTIFKANLRRAAR---HQKLDPSATHGITQFSDL 111
           AE  F  F   +   Y +   E   RF IFK N+++      H++   +  + +T+F+DL
Sbjct: 227 AEQLFFNFITTYKPEYINDHVEMTKRFEIFKENVKKIHELNTHER--GTGVYAVTRFTDL 284

Query: 112 TPAEFRRTYLGLRRKLRLPKD--ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           T  EF+  YLGL   L+ P      QA I   + LPA FDWR  GAV  VKDQG+CGSCW
Sbjct: 285 TYEEFKSKYLGLNPNLKKPNQIPMRQAEIPKVHQLPASFDWRPLGAVTEVKDQGACGSCW 344

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS TG +EG   L TGKL+SLSEQ+LVDCD           D GC+GG M++A+    +
Sbjct: 345 AFSVTGNIEGQWKLKTGKLLSLSEQELVDCD---------KMDDGCDGGYMDNAYRAIEQ 395

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  EE+YPY   D    C F+KS     ++    +S +E  +A  LV NGP+++ IN
Sbjct: 396 LGGLETEEEYPYEAED--DKCSFNKSLSKVQISGAVNISSNETNMAKWLVHNGPISIGIN 453

Query: 290 AVYMQTYIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A  MQ Y+GGVS P+  +C+ + +DHGVL+VGYG   Y P+  K+ PYW++KNSWG  WG
Sbjct: 454 ANAMQFYVGGVSHPWKALCNPKNIDHGVLIVGYGIKEY-PLFNKQLPYWVVKNSWGPGWG 512

Query: 347 ENGYYKICRGRNVCGVDSMVSTVAA 371
           E GYY++ RG   CGV++M S+   
Sbjct: 513 EQGYYRVFRGDGTCGVNTMASSAVV 537


>gi|390994427|gb|AFM37363.1| cathepsin F1 [Dictyocaulus viviparus]
          Length = 459

 Score =  263 bits (671), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 149/333 (44%), Positives = 193/333 (57%), Gaps = 44/333 (13%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHGITQFSDLTPA 114
           A + F  F  +  K Y S+ +   RF +FK NL+     Q K + +A +GITQFSDLTP 
Sbjct: 153 AWNQFVDFMGRHEKVYNSKHDTLKRFRVFKRNLKAIRSWQEKEEGTAVYGITQFSDLTPE 212

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPT-------------NDLPADFDWREKGAVGPVKD 161
           EF++ YL        P   D+ PI+P                LP  FDWR+ GAV  VK+
Sbjct: 213 EFKKIYL--------PYIWDE-PIVPNRMVDLTAEGVHLNETLPESFDWRDHGAVTDVKN 263

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QG CGSCW+FSTTG +EG  FLA  KLVSLSEQ+LVDCD           D GC GGL +
Sbjct: 264 QGFCGSCWAFSTTGNIEGQWFLAKKKLVSLSEQELVDCD---------KVDDGCEGGLPS 314

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN 281
            A++  ++ GGL  E  YPY G  RG  C  ++++ A  + +   +  DE+ + A LVK 
Sbjct: 315 QAYKEIMRMGGLETESAYPYDG--RGEECHINRTEFAVYINDSVELPHDEESMKAWLVKK 372

Query: 282 GPLAVAINAVYMQTYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIK 338
           GP+++ INA  +Q Y  G+S P  + C    L+HGVLLVGYGS        K KPYWIIK
Sbjct: 373 GPISIGINANPLQFYRHGISHPWKFFCEPYMLNHGVLLVGYGSE-------KNKPYWIIK 425

Query: 339 NSWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           NSWG  WGENGYY++ RG+NVCGV  M ++   
Sbjct: 426 NSWGPKWGENGYYRLYRGKNVCGVHEMPTSAVV 458


>gi|24417396|gb|AAN60308.1| unknown [Arabidopsis thaliana]
          Length = 193

 Score =  262 bits (670), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 128/195 (65%), Positives = 153/195 (78%), Gaps = 11/195 (5%)

Query: 8   LFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKF 67
           +F++S  +   VSS  + D  D +IRQV  G +            +L +E HFSLFK+KF
Sbjct: 10  VFVLSFFIV-LVSSSDVNDGDDLVIRQVVGGAEP----------QVLTSEDHFSLFKRKF 58

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
            K YAS EEHD+RF++FKANLRRA RHQKLDPSATHG+TQFSDLT +EFR+ +LG+R   
Sbjct: 59  GKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGF 118

Query: 128 RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
           +LPKDA++APILPT +LP DFDWR+ GAV PVK+QGSCGSCWSFS TGALEGANFLATGK
Sbjct: 119 KLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGK 178

Query: 188 LVSLSEQQLVDCDHE 202
           LVSLSEQQLVDCDH+
Sbjct: 179 LVSLSEQQLVDCDHQ 193


>gi|45822207|emb|CAE47500.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 326

 Score =  262 bits (669), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 148/319 (46%), Positives = 192/319 (60%), Gaps = 28/319 (8%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATH---GITQFS 109
           L  +  +  FK + NK+Y +  E   RFTIF+ +LR+   H  K D   +    G+T+F+
Sbjct: 17  LSDKEEWVQFKVRNNKSYRNYIEEQKRFTIFQGSLRKIENHNDKYDHGLSTFKLGVTKFA 76

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           DLT  EF    LG+ R  +  +      + P  DLP+ FDWREKGAV  VKDQGSCGSCW
Sbjct: 77  DLTEKEFSDM-LGISRSTKSSRPRVIHSLTPVKDLPSKFDWREKGAVTEVKDQGSCGSCW 135

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           SFSTTG +EGA FL TGKLVSLSEQ LVDC  E        C  GC+GG M+ A EY   
Sbjct: 136 SFSTTGTVEGAYFLKTGKLVSLSEQNLVDCAKE-------DC-YGCSGGYMDKALEYIET 187

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAI 288
           AGG+M E DYPY G D    C+FD SK+AA ++NF+ +   DED +   ++  GP++VAI
Sbjct: 188 AGGIMSENDYPYEGID--DKCRFDSSKVAAKISNFTYIKKNDEDDLKNAVIAKGPISVAI 245

Query: 289 NAVY-MQTYIGGV---SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           +A +  Q Y  G+   S  Y     L+HGVL+VGYG+        KE+ YWI+KNSWG  
Sbjct: 246 DASFNFQLYDSGILDDSSCYSDFNSLNHGVLVVGYGTE-------KEQDYWIVKNSWGAD 298

Query: 345 WGENGYYKICRGR-NVCGV 362
           WG +GY  + R + N CG+
Sbjct: 299 WGMDGYIWMSRNKNNQCGI 317


>gi|6649575|gb|AAF21461.1|U69120_1 cysteine proteinase PWCP1 [Paragonimus westermani]
          Length = 427

 Score =  261 bits (667), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 142/332 (42%), Positives = 202/332 (60%), Gaps = 30/332 (9%)

Query: 49  TNNDLLG------AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SA 101
           +N +LLG          F  F++KF K+Y+S  +   R+ +FK NL +    Q+L+  +A
Sbjct: 110 SNIELLGFRLPQNTSRLFEEFQRKFRKSYSS--DTAKRYALFKYNLLKMQLIQRLEKGTA 167

Query: 102 THGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVGPV 159
            +GIT+FSDL+  EFR +   ++R+       + A I PT    LP  FDWR  GAV  V
Sbjct: 168 NYGITKFSDLSAEEFRHSLANMKRRKSKGSQMETA-IFPTTIQSLPPSFDWRANGAVTEV 226

Query: 160 KDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           KDQG CGSCW+F+TTG +EG  F  T KL+SLSEQQL+DCD +         D  CNGGL
Sbjct: 227 KDQGMCGSCWAFATTGNIEGQWFRKTNKLISLSEQQLLDCDTK---------DEACNGGL 277

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV 279
              A++  +K GGLM E+DYPY    +  +C   +  I+A +   + +  DE ++AA LV
Sbjct: 278 PEWAYDEIVKMGGLMSEKDYPYEAM-KEQSCHLRRPNISAYINGSATLPSDEAKLAAWLV 336

Query: 280 KNGPLAVAINAVYMQTYIGGVSCP--YICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           +NGP++V +NA ++Q Y+GG+S P   +CS   LDH VLLVGYG + +       +PYWI
Sbjct: 337 QNGPISVGVNANFLQFYLGGISHPPHMLCSEAGLDHAVLLVGYGVSTFL-----RRPYWI 391

Query: 337 IKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           +KNSWG  WGE GY+++ RG   CG+++  +T
Sbjct: 392 VKNSWGGGWGEKGYFRMYRGDGTCGINADPTT 423


>gi|195453400|ref|XP_002073772.1| GK14287 [Drosophila willistoni]
 gi|194169857|gb|EDW84758.1| GK14287 [Drosophila willistoni]
          Length = 610

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 142/335 (42%), Positives = 194/335 (57%), Gaps = 19/335 (5%)

Query: 45  HHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATH 103
           H +  ++ L   EH F  F+ KF + Y +  E   R  IF+ NLR   +    +  SA +
Sbjct: 288 HKKHNHHSLDKVEHLFHKFQIKFERRYVNSVERQMRLRIFRQNLRIIEQLNANEMGSAKY 347

Query: 104 GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQA--PILPTNDLPADFDWREKGAVGPVKD 161
           GIT+F+D+T  E++      +R    P    +A  P  P  +LP +FDWR+KGAV  VK+
Sbjct: 348 GITEFADMTSTEYKERTGLWQRTEGQPTGGQKAVVPSYPGGELPKEFDWRQKGAVSSVKN 407

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QGSCGSCW+FST G +EG N + TG+L   SEQ+L+DCD         + DS CNGGL +
Sbjct: 408 QGSCGSCWAFSTIGNIEGLNAVKTGQLKEFSEQELLDCD---------TKDSACNGGLPD 458

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVK 280
           +A++   + GGL  E +YPY    R   C F+K+     V  F  +   +E  +   L+ 
Sbjct: 459 NAYKAIQEIGGLEYESEYPYKA--RKEQCHFNKTLAHVQVTGFVDLPKNNETAMQEWLIA 516

Query: 281 NGPLAVAINAVYMQTYIGGVSCPY--ICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWII 337
           NGP+++ INA  MQ Y GGVS P+  +C +  LDHGVL+VGYG + Y P   K  PYWI+
Sbjct: 517 NGPISIGINANAMQFYRGGVSHPWKILCEKSNLDHGVLIVGYGVSDY-PNFHKTLPYWIV 575

Query: 338 KNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           KNSWG  WGE GYY++ RG N CGV  M S+   A
Sbjct: 576 KNSWGPRWGEQGYYRVYRGDNTCGVSEMASSAILA 610


>gi|161408101|dbj|BAF94154.1| cathepsin F-like cysteine protease [Plautia stali]
          Length = 803

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 134/304 (44%), Positives = 187/304 (61%), Gaps = 16/304 (5%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKL 127
           ++Y + EE   RF IF+AN+++A   QK +  +A +G+T FSD++  EF++ YLGL+++ 
Sbjct: 509 RSYKTTEELKKRFRIFRANMKKADYLQKTEQGTAKYGVTIFSDISSKEFKKHYLGLKKRT 568

Query: 128 RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
              K   +   +P   LP ++DWR   AV PVK+QG CGSCW+FS TG +EG   + TG 
Sbjct: 569 PDIKFKQEMAQIPNITLPEEYDWRNYNAVTPVKNQGMCGSCWAFSVTGNIEGQYAIKTGN 628

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           LVSLSEQ+LVDCD           D GC GGL  +A+    + GGL  E DYPY+G  R 
Sbjct: 629 LVSLSEQELVDCD---------KYDDGCEGGLFETAYHAIEELGGLELESDYPYSG--RD 677

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP--YI 305
           + C F+ S++  S+ +   +S DE  +A  LV NGP+++ INA  MQ Y+GGVS P  ++
Sbjct: 678 NTCHFNSSEVRVSITSSVNISNDETDMAKWLVANGPISIGINANAMQFYLGGVSHPLKFL 737

Query: 306 CS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDS 364
           C  + LDHGVL+VGYG      +  +  PYW+IKNSW   WG  GYY + RG   CGV+ 
Sbjct: 738 CDPKTLDHGVLIVGYG-IHRTWLLHRHLPYWLIKNSWSSYWGAKGYYMLYRGDGSCGVNQ 796

Query: 365 MVST 368
             S+
Sbjct: 797 WPSS 800


>gi|348528696|ref|XP_003451852.1| PREDICTED: cathepsin F-like [Oreochromis niloticus]
          Length = 475

 Score =  258 bits (660), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 149/325 (45%), Positives = 187/325 (57%), Gaps = 33/325 (10%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSD 110
           +LLG    F  F  K+NK Y+SQEE D R  IF  NL+ A + Q LD  SA +G+T+FSD
Sbjct: 172 ELLG---QFKEFMTKYNKVYSSQEEVDRRLRIFHENLKTAEKLQALDQGSAEYGVTKFSD 228

Query: 111 LTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL----PADFDWREKGAVGPVKDQGSCG 166
           LT  EFR TYL       L +     P+ P        P  +DWR+ GAV PVK+QG CG
Sbjct: 229 LTEEEFRSTYLNPL----LSQWTLHQPMKPATPAKGPSPDSWDWRDHGAVSPVKNQGMCG 284

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FS  G +EG  FL  G L+SLSEQ+LVDCD           D  C GGL ++A+E 
Sbjct: 285 SCWAFSVIGNIEGQWFLKNGTLLSLSEQELVDCD---------GLDQACRGGLPSNAYEA 335

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
             K GGL  E DY YTG      C F   K+AA + +   +  DE +IAA L +NGP++V
Sbjct: 336 IEKLGGLETESDYSYTG--HKQRCDFTTGKVAAYINSSVELPKDEKEIAAWLAENGPVSV 393

Query: 287 AINAVYMQTYIGGVSCP---YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           A+NA  MQ Y  G+S P   +     +DH VLLVGYG         K  P+W IKNSWGE
Sbjct: 394 ALNAFAMQFYRKGISHPLKIFCNPWMIDHAVLLVGYGER-------KGIPFWAIKNSWGE 446

Query: 344 SWGENGYYKICRGRNVCGVDSMVST 368
            +GE GYY + RG N CG++ M S+
Sbjct: 447 DYGEQGYYYLYRGSNACGINKMCSS 471


>gi|16076437|emb|CAC94443.1| cysteine proteinase [Betula pendula]
          Length = 133

 Score =  257 bits (657), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 120/134 (89%), Positives = 130/134 (97%), Gaps = 1/134 (0%)

Query: 200 DHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAA 259
           DHECDPEE GSCDSGC+GGLMNSAFEYTLKAGGLMREEDYPYTGTDR   CKFDKSKIAA
Sbjct: 1   DHECDPEEQGSCDSGCSGGLMNSAFEYTLKAGGLMREEDYPYTGTDR-STCKFDKSKIAA 59

Query: 260 SVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGY 319
           SV+NFSV+SLDEDQIAANLVKNGPLAVAINAV+MQT++GGVSCPYICSRRLDHGVLLVG+
Sbjct: 60  SVSNFSVISLDEDQIAANLVKNGPLAVAINAVFMQTHVGGVSCPYICSRRLDHGVLLVGF 119

Query: 320 GSAGYAPIRLKEKP 333
           GSAGY+P+R+KEKP
Sbjct: 120 GSAGYSPVRMKEKP 133


>gi|195111686|ref|XP_002000409.1| GI10216 [Drosophila mojavensis]
 gi|193917003|gb|EDW15870.1| GI10216 [Drosophila mojavensis]
          Length = 605

 Score =  257 bits (656), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 142/326 (43%), Positives = 197/326 (60%), Gaps = 26/326 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLT 112
           +H F +F+ K+ + YA+  EH  R  IF+ NLR     Q+L+     SA +GIT+F+D+T
Sbjct: 296 DHLFHVFQIKYKRRYANSMEHQMRLRIFRQNLRTI---QELNDNEQGSAKYGITEFADMT 352

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVGPVKDQGSCGSCWS 170
            +E+ +     +R    P     A ++P    +LP +FDWREK AV  VK+QGSCGSCW+
Sbjct: 353 SSEYTQRAGLWQRSANKPTGGKPA-VVPAYKGELPKEFDWREKNAVTQVKNQGSCGSCWA 411

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FS TG +EG   + TG+L   SEQ+L+DCD         S DS CNGGLM++A++     
Sbjct: 412 FSVTGNIEGLYAIKTGELREFSEQELLDCD---------STDSACNGGLMDNAYKAIKDI 462

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
           GGL  E +YPY    +   C F+K+     VA+F  +   +E  +   L+ NGP+++ +N
Sbjct: 463 GGLEYESEYPYLAKKK--QCHFNKTLSHVQVADFVDLPKGNETAMQEWLLANGPISIGLN 520

Query: 290 AVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A  MQ Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  PYWI+KNSWG  WG
Sbjct: 521 ANAMQFYRGGVSHPWGPLCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPRWG 579

Query: 347 ENGYYKICRGRNVCGVDSMVSTVAAA 372
           E GYY+I RG N CGV  M ++   A
Sbjct: 580 EQGYYRIYRGDNTCGVSEMATSAVLA 605


>gi|357473429|ref|XP_003606999.1| Cysteine proteinase [Medicago truncatula]
 gi|355508054|gb|AES89196.1| Cysteine proteinase [Medicago truncatula]
          Length = 210

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 129/203 (63%), Positives = 155/203 (76%), Gaps = 13/203 (6%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M  +T++LF+V L +FS  +  T  +  D +IRQV D                LGAEHHF
Sbjct: 1   MDHRTLLLFVV-LFIFSVSAFSTPDEGEDPIIRQVVD-----------EEGVRLGAEHHF 48

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTY 120
           +LFK KF K Y+S++EHD+RF IFK+NL RA RHQ +DPSA HG+T+FSDLTP EFR++ 
Sbjct: 49  NLFKHKFGKVYSSKDEHDYRFKIFKSNLNRAKRHQLMDPSAVHGVTRFSDLTPREFRKSV 108

Query: 121 LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
           LGLR  + LPKDA+ APILPT++LP DFDWREKGAV  VK+QGSCGSCWSFSTTGALEGA
Sbjct: 109 LGLR-GVGLPKDANAAPILPTDNLPKDFDWREKGAVTAVKNQGSCGSCWSFSTTGALEGA 167

Query: 181 NFLATGKLVSLSEQQLVDCDHEC 203
           +FL+TGKLVSLSEQQLVDCDHE 
Sbjct: 168 HFLSTGKLVSLSEQQLVDCDHEV 190


>gi|291230041|ref|XP_002734978.1| PREDICTED: cysteine proteinase inhibitor-like [Saccoglossus
           kowalevskii]
          Length = 352

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/317 (44%), Positives = 193/317 (60%), Gaps = 30/317 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD-PSATHGITQFSDLTPAEFRR 118
           F  F K ++K Y ++EEH  R+ IF+ NL +A R Q+ +  +  +G+T+F DL+  EFR+
Sbjct: 54  FQDFMKTYDKKYDTEEEHQLRYQIFQDNLLKAERLQQTEQATGQYGVTKFMDLSEEEFRK 113

Query: 119 TYLGLRRKLRLP--KDADQAPILPTNDLPADFDWRE--KGAVGPVKDQGSCGSCWSFSTT 174
            YL    +   P  K A+    +P    PA FDWR+  K AV  VK+QG+CGSCW+FSTT
Sbjct: 114 YYLTPVWRGSDPHMKKAE----IPKGTPPAAFDWRDADKNAVTKVKNQGTCGSCWAFSTT 169

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G +EG   +  G LVSLSEQ+LVDCD           D GCNGGL ++A++  ++ GG+M
Sbjct: 170 GNIEGQWKIKKGTLVSLSEQELVDCD---------KLDQGCNGGLPSNAYQEIMRFGGIM 220

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            E+DYPYTG D+   CK + +     +     +S DE  +A+ L  NGP+++ INA  MQ
Sbjct: 221 SEDDYPYTGRDQ--DCKLNATLNKVYINGSMNISKDEGDMASWLAANGPISIGINANAMQ 278

Query: 295 TYIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Y GGVS P+   C+   LDHGVL+VGYG+           PYWIIKNSWG SWG  GYY
Sbjct: 279 FYFGGVSHPWKIFCNPENLDHGVLIVGYGTK-------DGTPYWIIKNSWGRSWGVEGYY 331

Query: 352 KICRGRNVCGVDSMVST 368
            + RG  VCG++ M ++
Sbjct: 332 LVYRGGGVCGLNEMCTS 348


>gi|270011071|gb|EFA07519.1| cystatin [Tribolium castaneum]
          Length = 1761

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/335 (43%), Positives = 200/335 (59%), Gaps = 29/335 (8%)

Query: 51   NDLLGA---EHHFSLFKK--KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHG 104
            ++LLG    E+H SLF    K       ++E+ +RF +F  NL +       +  +AT+G
Sbjct: 1443 DNLLGCDDREYHLSLFTDFLKKYNKKYHKKEYKYRFNVFVQNLMQIRVLNTFEQGTATYG 1502

Query: 105  ITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVK 160
            IT+F+D+T  EF R+ LGLR  LR   + ++ P     +P  +LP +FDWR+K  V  VK
Sbjct: 1503 ITRFADMTQKEFSRS-LGLRTDLR---NENETPFAQAKIPNIELPKEFDWRKKNVVTEVK 1558

Query: 161  DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
            +Q  CGSCW+FS TG +EG   L  GKL+  SEQ+LVDCD +         D GCNGGLM
Sbjct: 1559 NQEQCGSCWAFSVTGNVEGQYALRHGKLLEFSEQELVDCDTD---------DQGCNGGLM 1609

Query: 221  NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVK 280
            ++A+    K GGL  E+DYPY   D    C F+++     V     +S +E  +A  LV 
Sbjct: 1610 DTAYRSIEKIGGLETEQDYPYDAED--EKCHFNRTLARVQVTGALNISHNETDMAKWLVA 1667

Query: 281  NGPLAVAINAVYMQTYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWII 337
            NGP+++AINA  MQ Y+GGVS P  ++CS + LDHGVL+VGYG   Y P+  K  PYWI+
Sbjct: 1668 NGPISIAINANAMQFYMGGVSHPFKFLCSPKNLDHGVLIVGYGVHNY-PLFKKSLPYWIV 1726

Query: 338  KNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
            KNSWG  WGE GYY++ RG   CG++   S+   A
Sbjct: 1727 KNSWGTGWGEQGYYRVYRGDGTCGLNQTPSSAIVA 1761


>gi|189239337|ref|XP_973607.2| PREDICTED: similar to cathepsin F-like cysteine protease [Tribolium
            castaneum]
          Length = 1726

 Score =  255 bits (651), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 146/335 (43%), Positives = 200/335 (59%), Gaps = 29/335 (8%)

Query: 51   NDLLGA---EHHFSLFKK--KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHG 104
            ++LLG    E+H SLF    K       ++E+ +RF +F  NL +       +  +AT+G
Sbjct: 1408 DNLLGCDDREYHLSLFTDFLKKYNKKYHKKEYKYRFNVFVQNLMQIRVLNTFEQGTATYG 1467

Query: 105  ITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVK 160
            IT+F+D+T  EF R+ LGLR  LR   + ++ P     +P  +LP +FDWR+K  V  VK
Sbjct: 1468 ITRFADMTQKEFSRS-LGLRTDLR---NENETPFAQAKIPNIELPKEFDWRKKNVVTEVK 1523

Query: 161  DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
            +Q  CGSCW+FS TG +EG   L  GKL+  SEQ+LVDCD +         D GCNGGLM
Sbjct: 1524 NQEQCGSCWAFSVTGNVEGQYALRHGKLLEFSEQELVDCDTD---------DQGCNGGLM 1574

Query: 221  NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVK 280
            ++A+    K GGL  E+DYPY   D    C F+++     V     +S +E  +A  LV 
Sbjct: 1575 DTAYRSIEKIGGLETEQDYPYDAED--EKCHFNRTLARVQVTGALNISHNETDMAKWLVA 1632

Query: 281  NGPLAVAINAVYMQTYIGGVSCP--YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWII 337
            NGP+++AINA  MQ Y+GGVS P  ++CS + LDHGVL+VGYG   Y P+  K  PYWI+
Sbjct: 1633 NGPISIAINANAMQFYMGGVSHPFKFLCSPKNLDHGVLIVGYGVHNY-PLFKKSLPYWIV 1691

Query: 338  KNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
            KNSWG  WGE GYY++ RG   CG++   S+   A
Sbjct: 1692 KNSWGTGWGEQGYYRVYRGDGTCGLNQTPSSAIVA 1726


>gi|195054270|ref|XP_001994049.1| GH22731 [Drosophila grimshawi]
 gi|193895919|gb|EDV94785.1| GH22731 [Drosophila grimshawi]
          Length = 617

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 139/339 (41%), Positives = 199/339 (58%), Gaps = 20/339 (5%)

Query: 41  EILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP- 99
           E  +H +  ++ L   EH F  F+ K+ + YA+  EH  R  IF+ NLR        +  
Sbjct: 292 EKKTHKKRNHHTLNKIEHLFHKFQLKYKRQYANTAEHQMRLRIFRQNLRTIEELNANERG 351

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILP--TNDLPADFDWREKGAVG 157
           SA +GITQF+D+T  E++  + GL ++         A ++P    ++P +FDWR+K AV 
Sbjct: 352 SAKYGITQFADMTSTEYK-LHAGLWQRSEDKPTGGAAAVVPPYAGEMPKEFDWRQKKAVT 410

Query: 158 PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNG 217
            VK+QG CGSCW+FS TG +EG   + TG+L   SEQ+L+DCD         S DS CNG
Sbjct: 411 HVKNQGQCGSCWAFSVTGNIEGLYAIKTGELEEFSEQELLDCD---------STDSACNG 461

Query: 218 GLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAA 276
           GLM++A++     GGL  E +YPY    +   C F+++     ++ F  +   +E  +  
Sbjct: 462 GLMDNAYKAIKDIGGLEYESEYPYAA--KKMQCHFNRTMSHVQLSGFVDLPKGNETAMQE 519

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKP 333
            L+ NGP+++ +NA  MQ Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  P
Sbjct: 520 WLLSNGPISIGLNANAMQFYRGGVSHPWAPLCSKKNLDHGVLIVGYGVSDY-PNFHKTLP 578

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           YWI+KNSWG  WGE GYY+I RG N CGV  M ++   A
Sbjct: 579 YWIVKNSWGPRWGEQGYYRIYRGDNTCGVSEMATSAVLA 617


>gi|341878608|gb|EGT34543.1| hypothetical protein CAEBREN_26318 [Caenorhabditis brenneri]
          Length = 478

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 140/317 (44%), Positives = 187/317 (58%), Gaps = 26/317 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F  +  K Y ++ E   RF +FK N +     QK +  +A +G T+FSD+T  EF+ 
Sbjct: 176 FLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTAVYGFTKFSDMTTMEFKE 235

Query: 119 TYLGLRRKLRLPKDA----DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           T L  + +  +P D      +   +   DLP  FDWRE GAV  VK+QGSCGSCW+FSTT
Sbjct: 236 TMLPYQWEQPVPMDQANFEKEGVTISEEDLPDSFDWREHGAVTQVKNQGSCGSCWAFSTT 295

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G +EGA FLA  KLVSLSEQ+LVDCD         S D GCNGGL ++A++  ++ GGL 
Sbjct: 296 GNIEGAWFLAKKKLVSLSEQELVDCD---------SVDQGCNGGLPSNAYKEIIRMGGLE 346

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            E+ YPY G  RG  C   +  IA  +     +  DE ++   LV  GP+++ +NA  +Q
Sbjct: 347 PEDAYPYDG--RGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPISIGLNANTLQ 404

Query: 295 TYIGGVSCPY--ICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Y  GV  P+   C    L+HGVL+VGYG  G        KPYWI+KNSWG +WGE GY+
Sbjct: 405 FYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDG-------RKPYWIVKNSWGPTWGEAGYF 457

Query: 352 KICRGRNVCGVDSMVST 368
           K+ RG+NVCGV  M ++
Sbjct: 458 KLYRGKNVCGVQEMATS 474


>gi|341878637|gb|EGT34572.1| hypothetical protein CAEBREN_13324 [Caenorhabditis brenneri]
          Length = 478

 Score =  254 bits (648), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 140/317 (44%), Positives = 187/317 (58%), Gaps = 26/317 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F  +  K Y ++ E   RF +FK N +     QK +  +A +G T+FSD+T  EF+ 
Sbjct: 176 FLDFIDRHEKRYENKREVLKRFRVFKRNAKVIRELQKNEQGTAVYGFTKFSDMTTMEFKE 235

Query: 119 TYLGLRRKLRLPKDA----DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           T L  + +  +P D      +   +   DLP  FDWRE GAV  VK+QGSCGSCW+FSTT
Sbjct: 236 TMLPYQWEQPVPMDQANFEKEGVTISEEDLPDSFDWREHGAVTQVKNQGSCGSCWAFSTT 295

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G +EGA FLA  KLVSLSEQ+LVDCD         S D GCNGGL ++A++  ++ GGL 
Sbjct: 296 GNIEGAWFLAKKKLVSLSEQELVDCD---------SVDQGCNGGLPSNAYKEIIRMGGLE 346

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            E+ YPY G  RG  C   +  IA  +     +  DE ++   LV  GP+++ +NA  +Q
Sbjct: 347 PEDAYPYDG--RGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPISIGLNANTLQ 404

Query: 295 TYIGGVSCPY--ICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Y  GV  P+   C    L+HGVL+VGYG  G        KPYWI+KNSWG +WGE GY+
Sbjct: 405 FYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDG-------RKPYWIVKNSWGPTWGEAGYF 457

Query: 352 KICRGRNVCGVDSMVST 368
           K+ RG+NVCGV  M ++
Sbjct: 458 KLYRGKNVCGVQEMATS 474


>gi|67773374|gb|AAY81944.1| cysteine protease 6 [Paragonimus westermani]
          Length = 325

 Score =  254 bits (648), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 141/320 (44%), Positives = 192/320 (60%), Gaps = 33/320 (10%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+ + K+YA+ ++ + RF IFK NL RA  +Q  +  +A +G+TQFSDLTP 
Sbjct: 28  ARELYEQFKRDYGKSYAN-DDDEKRFAIFKDNLVRAQNYQLQEQGTARYGVTQFSDLTPE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSF 171
           EF   +L  R         DQ   +  NDL   P   DWRE GAV PV+DQGSCGSCW+F
Sbjct: 87  EFAAKFLSSRFD-------DQVERVQLNDLKAAPESVDWRELGAVAPVEDQGSCGSCWAF 139

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G +EG  FL TG+LVSLS+QQLVDCD +         DSGC+GG   + +   ++ G
Sbjct: 140 SVAGNVEGQWFLKTGQLVSLSKQQLVDCDVQ---------DSGCDGGYPPTTYGEIIRMG 190

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  + DYPY G  R   CK D+SK+ A + +  V+  +E + AA + ++GP++  INAV
Sbjct: 191 GLEAQRDYPYVG--REQPCKLDESKLLAKINSSIVLEANEKKQAAYIAEHGPMSSGINAV 248

Query: 292 YMQTYIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            +Q Y  G+S P     +   L+HGVL VGYG+           PYWIIKNSWG  WGE 
Sbjct: 249 TLQFYQSGISHPSKSQCQPDWLNHGVLSVGYGTEDGV-------PYWIIKNSWGTGWGEK 301

Query: 349 GYYKICRGRNVCGVDSMVST 368
           GY+++ RG   CG++ +VS+
Sbjct: 302 GYFRLYRGDGTCGIEKVVSS 321


>gi|347968731|ref|XP_003436277.1| AGAP002879-PB [Anopheles gambiae str. PEST]
 gi|333467869|gb|EGK96736.1| AGAP002879-PB [Anopheles gambiae str. PEST]
          Length = 1834

 Score =  254 bits (648), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 141/327 (43%), Positives = 191/327 (58%), Gaps = 30/327 (9%)

Query: 60   FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
            F  F+    + YAS  EH+ RF IF+ NL +  +  K +  +A +G+T+F+D+T AE+R 
Sbjct: 1524 FDKFRHHHRRQYASSMEHEMRFNIFRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYR- 1582

Query: 119  TYLGLRRKLRLPKD----------ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSC 168
             + GL     +PK           A +  +    DLP  FDWR+ GAV  VK+QGSCGSC
Sbjct: 1583 AHTGLV----VPKHDRANHVGNRVASEEDVAGVGDLPRSFDWRDHGAVTEVKNQGSCGSC 1638

Query: 169  WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
            W+FS  G +EG + + T KL S SEQ+L+DCD           D+GC GG M+ AF+   
Sbjct: 1639 WAFSAVGNVEGLHQIKTKKLESYSEQELIDCD---------KVDNGCGGGYMDDAFKAIE 1689

Query: 229  KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 288
            + GGL  E DYPY    +  +C F++S     V     +  +E  IA  L+KNGP+A+ +
Sbjct: 1690 QLGGLELENDYPYEAKAQ-KSCHFNRSLSHVQVKGAVDMPKNETYIAKYLIKNGPIAIGL 1748

Query: 289  NAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
            NA  MQ Y GG+S P+  +C+ + +DHGVL+VGYG   Y P+  K  PYWIIKNSWG  W
Sbjct: 1749 NANAMQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKEY-PMFNKTLPYWIIKNSWGPRW 1807

Query: 346  GENGYYKICRGRNVCGVDSMVSTVAAA 372
            GE GYY+I RG N CGV  M S+   A
Sbjct: 1808 GEQGYYRIYRGDNSCGVSEMASSAILA 1834


>gi|194898683|ref|XP_001978897.1| GG11133 [Drosophila erecta]
 gi|190650600|gb|EDV47855.1| GG11133 [Drosophila erecta]
          Length = 615

 Score =  253 bits (647), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 139/339 (41%), Positives = 199/339 (58%), Gaps = 20/339 (5%)

Query: 41  EILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP- 99
           E  +H + ++  L   +H F  F+ +F + Y S  E   R  IF+ NL+        +  
Sbjct: 290 EKKTHKKHSHRGLDKVDHLFHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNTNEMG 349

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVG 157
           SA +GIT+F+DLT +E++    GL ++         A ++P    +LP +FDWR+K AV 
Sbjct: 350 SAKYGITEFADLTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKNAVT 408

Query: 158 PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNG 217
           PVK+QGSCGSCW+FS TG +EG   + TG+L   SEQ+L+DCD         + DS CNG
Sbjct: 409 PVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNG 459

Query: 218 GLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAA 276
           GLM++A++     GGL  E +YPY    + + C F+++     VA F  +   +E  +  
Sbjct: 460 GLMDNAYKAIKDIGGLEYEAEYPYKA--KKNQCHFNRTLSHVQVAGFVDLPKGNETAMQE 517

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKP 333
            L+  GP+++ INA  MQ Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  P
Sbjct: 518 WLLTKGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLP 576

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           YWI+KNSWG  WGE GYY++ RG N CGV  M ++   A
Sbjct: 577 YWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 615


>gi|347968733|ref|XP_312034.5| AGAP002879-PA [Anopheles gambiae str. PEST]
 gi|333467868|gb|EAA08025.5| AGAP002879-PA [Anopheles gambiae str. PEST]
          Length = 1810

 Score =  253 bits (647), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 141/327 (43%), Positives = 191/327 (58%), Gaps = 30/327 (9%)

Query: 60   FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
            F  F+    + YAS  EH+ RF IF+ NL +  +  K +  +A +G+T+F+D+T AE+R 
Sbjct: 1500 FDKFRHHHRRQYASSMEHEMRFNIFRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYR- 1558

Query: 119  TYLGLRRKLRLPKD----------ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSC 168
             + GL     +PK           A +  +    DLP  FDWR+ GAV  VK+QGSCGSC
Sbjct: 1559 AHTGLV----VPKHDRANHVGNRVASEEDVAGVGDLPRSFDWRDHGAVTEVKNQGSCGSC 1614

Query: 169  WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
            W+FS  G +EG + + T KL S SEQ+L+DCD           D+GC GG M+ AF+   
Sbjct: 1615 WAFSAVGNVEGLHQIKTKKLESYSEQELIDCD---------KVDNGCGGGYMDDAFKAIE 1665

Query: 229  KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 288
            + GGL  E DYPY    +  +C F++S     V     +  +E  IA  L+KNGP+A+ +
Sbjct: 1666 QLGGLELENDYPYEAKAQ-KSCHFNRSLSHVQVKGAVDMPKNETYIAKYLIKNGPIAIGL 1724

Query: 289  NAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
            NA  MQ Y GG+S P+  +C+ + +DHGVL+VGYG   Y P+  K  PYWIIKNSWG  W
Sbjct: 1725 NANAMQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKEY-PMFNKTLPYWIIKNSWGPRW 1783

Query: 346  GENGYYKICRGRNVCGVDSMVSTVAAA 372
            GE GYY+I RG N CGV  M S+   A
Sbjct: 1784 GEQGYYRIYRGDNSCGVSEMASSAILA 1810


>gi|118394988|ref|XP_001029851.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89284124|gb|EAR82188.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 330

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 145/316 (45%), Positives = 187/316 (59%), Gaps = 28/316 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  F + +NK Y+S+E ++ R +IFK NLRR     K D  A HGITQF+DLT  EF   
Sbjct: 30  FKKFTQTYNKKYSSEEHYNARLSIFKENLRRIELFNKND-EAQHGITQFADLTHEEFADM 88

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           YLG + +LR  +        P    P   DW  KGAV PVK+QGSCGSCW+FSTTG++EG
Sbjct: 89  YLGYKPQLRNSQAKVSLSSTPFT-APTAIDWTTKGAVTPVKNQGSCGSCWAFSTTGSIEG 147

Query: 180 ANFLATGK-LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
              L   + L S SEQQLVDCD +         D GCNGGLM++AF Y L++  L  E  
Sbjct: 148 QYVLQLKQNLTSFSEQQLVDCDTK--------EDQGCNGGLMDNAFTY-LESAKLETESA 198

Query: 239 YPYTGTDRGHACKFDKSKIAASVANF------SVVSLDEDQIAANLVKNGPLAVAINAVY 292
           YPYT  D   +CK+++S     VA+F        V+  E+ +   L   GPL+VAINA  
Sbjct: 199 YPYTAVD--GSCKYNQSLGVVGVASFVDIEQGKTVADTENTMGVALDNIGPLSVAINANN 256

Query: 293 MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
           +Q Y GG+S P IC+   L+HGVL+VG GS          K +W +KNSWG SWGE GY+
Sbjct: 257 LQFYAGGISNPLICNPNGLNHGVLIVGLGSE-------NGKDFWKVKNSWGASWGEKGYF 309

Query: 352 KICRGRNVCGVDSMVS 367
           +I RG+  CG++  VS
Sbjct: 310 RIVRGKGKCGINRAVS 325


>gi|347968729|ref|XP_003436276.1| AGAP002879-PC [Anopheles gambiae str. PEST]
 gi|333467870|gb|EGK96737.1| AGAP002879-PC [Anopheles gambiae str. PEST]
          Length = 953

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 190/323 (58%), Gaps = 22/323 (6%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F+    + YAS  EH+ RF IF+ NL +  +  K +  +A +G+T+F+D+T AE+R 
Sbjct: 643 FDKFRHHHRRQYASSMEHEMRFNIFRNNLFKIEQLNKFERGTAKYGVTKFADMTVAEYR- 701

Query: 119 TYLGL------RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            + GL      R      + A +  +    DLP  FDWR+ GAV  VK+QGSCGSCW+FS
Sbjct: 702 AHTGLVVPKHDRANHVGNRVASEEDVAGVGDLPRSFDWRDHGAVTEVKNQGSCGSCWAFS 761

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
             G +EG + + T KL S SEQ+L+DCD           D+GC GG M+ AF+   + GG
Sbjct: 762 AVGNVEGLHQIKTKKLESYSEQELIDCD---------KVDNGCGGGYMDDAFKAIEQLGG 812

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  E DYPY    +  +C F++S     V     +  +E  IA  L+KNGP+A+ +NA  
Sbjct: 813 LELENDYPYEAKAQ-KSCHFNRSLSHVQVKGAVDMPKNETYIAKYLIKNGPIAIGLNANA 871

Query: 293 MQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           MQ Y GG+S P+  +C+ + +DHGVL+VGYG   Y P+  K  PYWIIKNSWG  WGE G
Sbjct: 872 MQFYRGGISHPWHPLCNHKSIDHGVLIVGYGIKEY-PMFNKTLPYWIIKNSWGPRWGEQG 930

Query: 350 YYKICRGRNVCGVDSMVSTVAAA 372
           YY+I RG N CGV  M S+   A
Sbjct: 931 YYRIYRGDNSCGVSEMASSAILA 953


>gi|195497262|ref|XP_002096026.1| GE25302 [Drosophila yakuba]
 gi|194182127|gb|EDW95738.1| GE25302 [Drosophila yakuba]
          Length = 615

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/339 (40%), Positives = 200/339 (58%), Gaps = 20/339 (5%)

Query: 41  EILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP- 99
           E  +H + ++  L  A+H F  F+ +F + Y S  E   R  IF+ NL+   +    +  
Sbjct: 290 EKKTHKKHSHRALDKADHLFHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEQLNVNEMG 349

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVG 157
           SA +GIT+F+D+T +E++    GL ++           ++P    +LP +FDWR+K AV 
Sbjct: 350 SAKYGITEFADMTSSEYKER-TGLWQRNEAKATGGSVAVVPAYHGELPKEFDWRQKNAVT 408

Query: 158 PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNG 217
            VK+QGSCGSCW+FS TG +EG + + TG L   SEQ+L+DCD         + DS CNG
Sbjct: 409 QVKNQGSCGSCWAFSVTGNIEGLHAVKTGDLKEFSEQELLDCD---------TTDSACNG 459

Query: 218 GLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAA 276
           GLM++A++     GGL  E +YPY    + + C F+++     VA F  +   +E  +  
Sbjct: 460 GLMDNAYKAIKDIGGLEYEAEYPYKA--KKNQCHFNRTLSHVQVAGFVDLPKGNETAMQE 517

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKP 333
            L+ NGP+++ INA  MQ Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  P
Sbjct: 518 WLLTNGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSEY-PNFHKTLP 576

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           YWI+KNSWG  WGE GYY++ RG N CGV  M ++   A
Sbjct: 577 YWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 615


>gi|256077197|ref|XP_002574894.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230780|emb|CCD77197.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 419

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 136/313 (43%), Positives = 191/313 (61%), Gaps = 27/313 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYL 121
           FK K+ K Y   E+ + RF IFK+N+ +A  +Q  +  SA +G+T +SDLT  EF RT+L
Sbjct: 123 FKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTTDEFARTHL 181

Query: 122 GLRRKLRLPKDADQAPI---LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
                  +P      P       N++P +FDWREKGAV  VK+QG CGSCW+FSTTG +E
Sbjct: 182 --TASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVE 239

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
              F  TGKL+SLSEQQLVDCD           D GCNGGL ++A+E  +K GGLM E++
Sbjct: 240 SQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLEDN 290

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           YPY    +   C      +A  + +   ++ DE ++AA L  N  ++V +NA+ +Q Y  
Sbjct: 291 YPYDA--KNEKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQH 348

Query: 299 GVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           G+S P+   CS+  LDH VLLVGYG      +  K +P+WI+KNSWG  WGENGY+++ R
Sbjct: 349 GISHPWWIFCSKYLLDHAVLLVGYG------VSEKNEPFWIVKNSWGVEWGENGYFRMYR 402

Query: 356 GRNVCGVDSMVST 368
           G   CG++++ ++
Sbjct: 403 GDGTCGINTVATS 415


>gi|256077193|ref|XP_002574892.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230781|emb|CCD77198.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 457

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 136/313 (43%), Positives = 191/313 (61%), Gaps = 27/313 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYL 121
           FK K+ K Y   E+ + RF IFK+N+ +A  +Q  +  SA +G+T +SDLT  EF RT+L
Sbjct: 161 FKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTTDEFARTHL 219

Query: 122 GLRRKLRLPKDADQAPI---LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
                  +P      P       N++P +FDWREKGAV  VK+QG CGSCW+FSTTG +E
Sbjct: 220 --TASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVE 277

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
              F  TGKL+SLSEQQLVDCD           D GCNGGL ++A+E  +K GGLM E++
Sbjct: 278 SQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLEDN 328

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           YPY    +   C      +A  + +   ++ DE ++AA L  N  ++V +NA+ +Q Y  
Sbjct: 329 YPYDA--KNEKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQH 386

Query: 299 GVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           G+S P+   CS+  LDH VLLVGYG      +  K +P+WI+KNSWG  WGENGY+++ R
Sbjct: 387 GISHPWWIFCSKYLLDHAVLLVGYG------VSEKNEPFWIVKNSWGVEWGENGYFRMYR 440

Query: 356 GRNVCGVDSMVST 368
           G   CG++++ ++
Sbjct: 441 GDGTCGINTVATS 453


>gi|256077195|ref|XP_002574893.1| cathepsin F (C01 family) [Schistosoma mansoni]
 gi|353230782|emb|CCD77199.1| cathepsin F (C01 family) [Schistosoma mansoni]
          Length = 456

 Score =  251 bits (640), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 136/313 (43%), Positives = 190/313 (60%), Gaps = 28/313 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYL 121
           FK K+ K Y   E  + RF IFK+N+ +A  +Q  +  SA +G+T +SDLT  EF RT+L
Sbjct: 161 FKLKYRKQY--HETDEIRFNIFKSNILKAQLYQVFERGSAIYGVTPYSDLTTDEFARTHL 218

Query: 122 GLRRKLRLPKDADQAPI---LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
                  +P      P       N++P +FDWREKGAV  VK+QG CGSCW+FSTTG +E
Sbjct: 219 --TASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAFSTTGNVE 276

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
              F  TGKL+SLSEQQLVDCD           D GCNGGL ++A+E  +K GGLM E++
Sbjct: 277 SQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMGGLMLEDN 327

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           YPY    +   C      +A  + +   ++ DE ++AA L  N  ++V +NA+ +Q Y  
Sbjct: 328 YPYDA--KNEKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNALLLQFYQH 385

Query: 299 GVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           G+S P+   CS+  LDH VLLVGYG      +  K +P+WI+KNSWG  WGENGY+++ R
Sbjct: 386 GISHPWWIFCSKYLLDHAVLLVGYG------VSEKNEPFWIVKNSWGVEWGENGYFRMYR 439

Query: 356 GRNVCGVDSMVST 368
           G   CG++++ ++
Sbjct: 440 GDGTCGINTVATS 452


>gi|67773376|gb|AAY81945.1| cysteine protease 7 [Paragonimus westermani]
          Length = 325

 Score =  251 bits (640), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 137/317 (43%), Positives = 191/317 (60%), Gaps = 27/317 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+ + KAYA++++   RF IFK NL RA ++Q  +  +A +G+TQFSDLTP 
Sbjct: 28  ARELYEQFKRDYGKAYANEDDQ-KRFAIFKDNLVRAQQYQMQEQGTAKYGVTQFSDLTPE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EF   YLG R   R+    D+  +      PA  DWR+KGAVGPV+DQGSCGSCW+FS T
Sbjct: 87  EFAAMYLGSRIDERV----DRVQLNDLQTAPASVDWRKKGAVGPVEDQGSCGSCWAFSVT 142

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
             +EG  FL TG+LVSLS+QQLVDCD           D GC+GG     ++   + GGL 
Sbjct: 143 ANVEGQWFLKTGRLVSLSKQQLVDCDR---------LDHGCSGGYPPYTYKEIKRMGGLE 193

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            +  YPYT   +  AC+ D+SK+ A + +  V+  DE++ AA L ++GP++  +NA  +Q
Sbjct: 194 LQSAYPYTSWKQ--ACRIDRSKLVAKIDDSIVLETDEEKQAAWLAEHGPMSTCLNAGPLQ 251

Query: 295 TYIGGVSCP--YICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Y  G+  P   +CS   L+H VL VGY +           PYW ++NSWG  WGENGY+
Sbjct: 252 FYQSGILHPSKAMCSPEGLNHAVLTVGYDTE-------HGVPYWTVRNSWGTRWGENGYF 304

Query: 352 KICRGRNVCGVDSMVST 368
           +I RG   CG+D + ++
Sbjct: 305 RIYRGDGTCGIDRLTTS 321


>gi|3023456|sp|Q26534.1|CATL_SCHMA RecName: Full=Cathepsin L; AltName: Full=SMCL1; Flags: Precursor
 gi|555663|gb|AAC46485.1| preprocathepsin L [Schistosoma mansoni]
 gi|1094710|prf||2106314A cathepsin L
          Length = 319

 Score =  250 bits (638), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 136/320 (42%), Positives = 193/320 (60%), Gaps = 27/320 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQK-LDPSATHGITQFSDLTPA 114
            +  +  FK K+ K Y   E+ + RF IFK+N+ +A  +Q  +  SA +G+T +SDLT  
Sbjct: 16  VDEKYVQFKLKYRKQYHETED-EIRFNIFKSNILKAQLYQVFVRGSAIYGVTPYSDLTTD 74

Query: 115 EFRRTYLGLRRKLRLPKDADQAPI---LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           EF RT+L       +P      P       N++P +FDWREKGAV  VK+QG CGSCW+F
Sbjct: 75  EFARTHL--TASWVVPSSRSNTPTSLGKEVNNIPKNFDWREKGAVTEVKNQGMCGSCWAF 132

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           STTG +E   F  TGKL+SLSEQQLVDCD           D GCNGGL ++A+E  +K G
Sbjct: 133 STTGNVESQWFRKTGKLLSLSEQQLVDCD---------GLDDGCNGGLPSNAYESIIKMG 183

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GLM E++YPY    +   C      +A  + +   ++ DE ++AA L  N  ++V +NA+
Sbjct: 184 GLMLEDNYPYDA--KNEKCHLKTDGVAVYINSSVNLTQDETELAAWLYHNSTISVGMNAL 241

Query: 292 YMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            +Q Y  G+S P+   CS+  LDH VLLVGYG      +  K +P+WI+KNSWG  WGEN
Sbjct: 242 LLQFYQHGISHPWWIFCSKYLLDHAVLLVGYG------VSEKNEPFWIVKNSWGVEWGEN 295

Query: 349 GYYKICRGRNVCGVDSMVST 368
           GY+++ RG   CG++++ ++
Sbjct: 296 GYFRMYRGDGSCGINTVATS 315


>gi|85068708|gb|ABC69434.1| cysteine protease [Clonorchis sinensis]
 gi|85068710|gb|ABC69435.1| cysteine protease [Clonorchis sinensis]
          Length = 328

 Score =  250 bits (638), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 143/320 (44%), Positives = 187/320 (58%), Gaps = 30/320 (9%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL    ++R         + P  D+  D   FDWRE GAVGPV DQG CGSCW+F
Sbjct: 87  EFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G +EG  F  TG L++LSEQQLVDCDH          D GCNGG     +    K G
Sbjct: 143 SVIGNVEGQWFRKTGDLLALSEQQLVDCDH---------LDKGCNGGYPPKTYGEIEKMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG D    C  ++SK  A V + +V+ L E   A  L + GPL+ A+NAV
Sbjct: 194 GLELASDYPYTGVD--GICYMNQSKFVAYVNDSTVLPLSEKIQAQKLKEIGPLSSALNAV 251

Query: 292 YMQTYIGGV--SCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            +Q Y+GG+    P++C+   L+H VL VGYG+           PYWI+KNSWG  +GE 
Sbjct: 252 LLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGI-------PYWIVKNSWGVGFGEK 304

Query: 349 GYYKICRGRNVCGVDSMVST 368
           GY++I RG   CG++ +VST
Sbjct: 305 GYFRIFRGAGTCGINLVVST 324


>gi|118429527|gb|ABK91811.1| cathepsin F precursor [Clonorchis sinensis]
          Length = 326

 Score =  250 bits (638), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 141/318 (44%), Positives = 183/318 (57%), Gaps = 28/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL    ++R         + P  D+  D   FDWRE GAVGPV DQG CGSCW+F
Sbjct: 87  EFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G +EG  F  TG L++LSEQQLVDCD+          D GC+GG     +    K G
Sbjct: 143 SVIGNVEGQWFRKTGDLLALSEQQLVDCDY---------LDGGCDGGYPPQTYTAIQKMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG   G  C  DKSK  A +   +++ L E   A  L   GPL+ A+NA 
Sbjct: 194 GLELASDYPYTGV--GGICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSSALNAD 251

Query: 292 YMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            +Q Y GG+  P +C    ++H VL VGYG           KPYWI+KNSWGE +GE GY
Sbjct: 252 TLQLYKGGIMRPRLCDPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGY 304

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++S+V+T
Sbjct: 305 FRIYRGDGTCGINSIVTT 322


>gi|432880227|ref|XP_004073613.1| PREDICTED: cathepsin F-like [Oryzias latipes]
          Length = 473

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 150/322 (46%), Positives = 190/322 (59%), Gaps = 27/322 (8%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSD 110
            LLG    F  F  K+ K Y+SQEE + R  IF+ NL+ A + Q LD  SA +G+T+FSD
Sbjct: 170 QLLG---QFKDFMVKYKKDYSSQEEAERRLQIFQENLKTAEKLQALDQGSAEYGVTKFSD 226

Query: 111 LTPAEFRRTYLG-LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           LT  EFR TYL  L  +  L +    AP   T    + +DWR+ GAV PVK+QG CGSCW
Sbjct: 227 LTEEEFRSTYLNPLLSQWTLHRGMKPAPPAKTPAPDS-WDWRDHGAVSPVKNQGMCGSCW 285

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS TG +EG  FL  G L+SLSEQ+LVDCD           D  C GGL ++A+E   K
Sbjct: 286 AFSVTGNIEGQWFLKNGTLLSLSEQELVDCD---------GLDQACRGGLPSNAYEAIEK 336

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  E DY YTG      C F   K+AA + +   +  DE +IAA L +NGP++VA+N
Sbjct: 337 LGGLESETDYSYTG--HKQKCDFTNRKVAAYINSSVELPKDEREIAAWLAENGPISVALN 394

Query: 290 AVYMQTYIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A  MQ Y  GVS P+   C+   +DH VLLVGYG            P+W IKNSWGE +G
Sbjct: 395 AFAMQFYKKGVSHPWKIFCNPWMIDHAVLLVGYGERNGI-------PFWAIKNSWGEDYG 447

Query: 347 ENGYYKICRGRNVCGVDSMVST 368
           E GYY + RG N CG++ M S+
Sbjct: 448 EQGYYYLQRGSNACGINRMGSS 469


>gi|56755191|gb|AAW25775.1| SJCHGC00511 protein [Schistosoma japonicum]
          Length = 454

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/309 (43%), Positives = 194/309 (62%), Gaps = 23/309 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           ++ FK  + K Y  + +++ RF+IFK+NL +A  +Q L+  SA +G+T +SDLT  EF R
Sbjct: 157 YAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTTDEFSR 215

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           T+L    +    ++   +P     D+P +FDWREKGAV  VK+QG CGSCW+FSTTG +E
Sbjct: 216 THLTAPWRASSKRNT-ISPRREVGDIPNNFDWREKGAVTEVKNQGMCGSCWAFSTTGNIE 274

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
              F  TGKL+SLSEQQLVDCD         S D GCNGGL ++A+E  ++ GGLM E++
Sbjct: 275 SQWFRKTGKLLSLSEQQLVDCD---------SLDDGCNGGLPSNAYESIIRMGGLMLEDN 325

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           YPY    +   C    + +AA + +   ++ DE ++A  L  +  ++V +NA+ +Q Y  
Sbjct: 326 YPYDA--KNEKCHLKVANVAAYINSSVNLTQDESELAIWLYHHSAISVGMNALLLQFYRH 383

Query: 299 GVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           G+S P+   CS+  LDH VLLVGYG      +  K +P+WI+KNSWG  WGE GY+++ R
Sbjct: 384 GISHPWWIFCSKYLLDHAVLLVGYG------VSEKNEPFWIVKNSWGVEWGEKGYFRMYR 437

Query: 356 GRNVCGVDS 364
           G   CG+++
Sbjct: 438 GDGTCGINT 446


>gi|290999038|ref|XP_002682087.1| predicted protein [Naegleria gruberi]
 gi|284095713|gb|EFC49343.1| predicted protein [Naegleria gruberi]
          Length = 349

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 144/346 (41%), Positives = 188/346 (54%), Gaps = 48/346 (13%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL--------DPSATHGITQ 107
           A ++F  FKK + K YA++EEH  R+ IF  N+    +   +         P A +GITQ
Sbjct: 11  ALNYFQHFKKLYLKRYATEEEHHRRWKIFYDNINLVNQLNIMHKPNEIAGKPVAQYGITQ 70

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILP-----TNDLPADFDWREKGAVGPVKDQ 162
           F D++P EF R  L    K    KD +  P  P      + LP  FDWRE GAV  VKDQ
Sbjct: 71  FMDMSPNEFARVKLLPPTK---QKDINHTPTAPKEKYQIDALPESFDWREHGAVTAVKDQ 127

Query: 163 GSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNS 222
            SCGSCW+FST   +EGA FLA   L   S QQLVDCD         + + GC GG    
Sbjct: 128 ASCGSCWAFSTVENIEGAYFLAGHNLTKFSPQQLVDCD---------NLNCGCFGGFPFI 178

Query: 223 AFEYTLKAGGLMREEDYPY-------------------TGTDRGHACKFDKSKIAASVAN 263
           A +Y  K GGL  E  YPY                   +G      C     ++ A VA 
Sbjct: 179 AMQYIQKRGGLATESSYPYCIPPLGNCFPCNTNKTYCPSGEYCNRTCSVQNYQLVAKVAG 238

Query: 264 FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAG 323
           +  VS +ED IAA LVKNGPL++ +NA+++Q Y  G+S P  C   +DH VLLVG+G+  
Sbjct: 239 YENVSQNEDDIAAYLVKNGPLSICLNAMWLQFYHSGISDPMYCPPDIDHAVLLVGFGTHT 298

Query: 324 YAPIRLKEKP-YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
                L EK  YWI+KNSWGESWGE GY+++ RG++ CG+++MV+ 
Sbjct: 299 N---WLGEKTNYWIVKNSWGESWGEKGYFRLIRGKDKCGINTMVAN 341


>gi|195395906|ref|XP_002056575.1| GJ11017 [Drosophila virilis]
 gi|194143284|gb|EDW59687.1| GJ11017 [Drosophila virilis]
          Length = 599

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 195/326 (59%), Gaps = 26/326 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLT 112
           +H F  F+ K+ + YA+  EH  R  IF+ +L+     Q+L+     SA +GIT+F+D+T
Sbjct: 290 DHLFHKFQVKYKRRYANSAEHQMRLRIFRQSLKTI---QELNANEQGSAKYGITEFADMT 346

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVGPVKDQGSCGSCWS 170
             E+ +   GL ++         A ++P    +LP +FDWR+K AV  VK+QG CGSCW+
Sbjct: 347 STEYAQR-AGLWQRSEGKPTGGAAAVVPAYAGELPKEFDWRQKNAVTHVKNQGQCGSCWA 405

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FS TG +EGA  + TG L   SEQ+L+DCD         S DS CNGGLM++A++     
Sbjct: 406 FSVTGNIEGAYAIKTGDLQEFSEQELLDCD---------SKDSACNGGLMDNAYKAIKDI 456

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
           GGL  E +YPY G  +   C F+++     V+ F  +   +E  +   L+ NGP+++ IN
Sbjct: 457 GGLEYESEYPYEGKKK--QCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTNGPISIGIN 514

Query: 290 AVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A  MQ Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  PYWI+KNSWG  WG
Sbjct: 515 ANAMQFYRGGVSHPWSPLCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPRWG 573

Query: 347 ENGYYKICRGRNVCGVDSMVSTVAAA 372
           E GYY++ RG N CGV  M ++   A
Sbjct: 574 EQGYYRVYRGDNTCGVSEMATSALLA 599


>gi|71993922|ref|NP_505215.2| Protein TAG-196 [Caenorhabditis elegans]
 gi|351050011|emb|CCD64084.1| Protein TAG-196 [Caenorhabditis elegans]
          Length = 477

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/327 (43%), Positives = 188/327 (57%), Gaps = 45/327 (13%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F  +  K Y ++ E   RF +FK N +     QK +  +A +G T+FSD+T  EF+ 
Sbjct: 174 FLDFVDRHEKKYTNKREVLKRFRVFKKNAKVIRELQKNEQGTAVYGFTKFSDMTTMEFK- 232

Query: 119 TYLGLRRKLRLPKDADQAPILPTN--------------DLPADFDWREKGAVGPVKDQGS 164
                  K+ LP   +Q P+ P                DLP  FDWREKGAV  VK+QG+
Sbjct: 233 -------KIMLPYQWEQ-PVYPMEQANFEKHDVTINEEDLPESFDWREKGAVTQVKNQGN 284

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCW+FSTTG +EGA F+A  KLVSLSEQ+LVDCD         S D GCNGGL ++A+
Sbjct: 285 CGSCWAFSTTGNVEGAWFIAKNKLVSLSEQELVDCD---------SMDQGCNGGLPSNAY 335

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 284
           +  ++ GGL  E+ YPY G  RG  C   +  IA  +     +  DE ++   LV  GP+
Sbjct: 336 KEIIRMGGLEPEDAYPYDG--RGETCHLVRKDIAVYINGSVELPHDEVEMQKWLVTKGPI 393

Query: 285 AVAINAVYMQTYIGGVSCPY--ICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           ++ +NA  +Q Y  GV  P+   C    L+HGVL+VGYG  G        KPYWI+KNSW
Sbjct: 394 SIGLNANTLQFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDG-------RKPYWIVKNSW 446

Query: 342 GESWGENGYYKICRGRNVCGVDSMVST 368
           G +WGE GY+K+ RG+NVCGV  M ++
Sbjct: 447 GPNWGEAGYFKLYRGKNVCGVQEMATS 473


>gi|195343593|ref|XP_002038380.1| GM10654 [Drosophila sechellia]
 gi|194133401|gb|EDW54917.1| GM10654 [Drosophila sechellia]
          Length = 615

 Score =  249 bits (636), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/339 (40%), Positives = 198/339 (58%), Gaps = 20/339 (5%)

Query: 41  EILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP- 99
           E  +H + ++      +H F  F+ +F + Y S  E   R  IF+ NL+        +  
Sbjct: 290 EKKTHKKHSHRAFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMG 349

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVG 157
           SA +GIT+F+D+T +E++    GL ++         A ++P    +LP +FDWR+K AV 
Sbjct: 350 SAKYGITEFADMTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVT 408

Query: 158 PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNG 217
            VK+QGSCGSCW+FS TG +EG   + TG+L   SEQ+L+DCD         + DS CNG
Sbjct: 409 QVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNG 459

Query: 218 GLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAA 276
           GLM++A++     GGL  E +YPY    + + C F+++     VA F  +   +E  +  
Sbjct: 460 GLMDNAYKAIKDIGGLEYEAEYPYKA--KKNQCHFNRTLSHVQVAGFVDLPKGNETAMQE 517

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKP 333
            L+ NGP+++ INA  MQ Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  P
Sbjct: 518 WLLTNGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLP 576

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           YWI+KNSWG  WGE GYY++ RG N CGV  M ++   A
Sbjct: 577 YWIVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 615


>gi|24644155|ref|NP_730901.1| CG12163, isoform A [Drosophila melanogaster]
 gi|32699625|sp|Q9VN93.2|CPR1_DROME RecName: Full=Putative cysteine proteinase CG12163; Flags:
           Precursor
 gi|23170427|gb|AAF52055.2| CG12163, isoform A [Drosophila melanogaster]
 gi|27819876|gb|AAO24986.1| LP08529p [Drosophila melanogaster]
          Length = 614

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/334 (40%), Positives = 196/334 (58%), Gaps = 20/334 (5%)

Query: 46  HESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHG 104
           H+  ++     +H F  F+ +F + Y S  E   R  IF+ NL+        +  SA +G
Sbjct: 294 HKKHSHRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYG 353

Query: 105 ITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVGPVKDQ 162
           IT+F+D+T +E++    GL ++         A ++P    +LP +FDWR+K AV  VK+Q
Sbjct: 354 ITEFADMTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQ 412

Query: 163 GSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNS 222
           GSCGSCW+FS TG +EG   + TG+L   SEQ+L+DCD         + DS CNGGLM++
Sbjct: 413 GSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDN 463

Query: 223 AFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKN 281
           A++     GGL  E +YPY    + + C F+++     VA F  +   +E  +   L+ N
Sbjct: 464 AYKAIKDIGGLEYEAEYPYKA--KKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWLLAN 521

Query: 282 GPLAVAINAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIK 338
           GP+++ INA  MQ Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  PYWI+K
Sbjct: 522 GPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYWIVK 580

Query: 339 NSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           NSWG  WGE GYY++ RG N CGV  M ++   A
Sbjct: 581 NSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 614


>gi|24644153|ref|NP_649521.1| CG12163, isoform B [Drosophila melanogaster]
 gi|23170426|gb|AAN13266.1| CG12163, isoform B [Drosophila melanogaster]
 gi|378548248|gb|AFC17498.1| FI18603p1 [Drosophila melanogaster]
          Length = 475

 Score =  248 bits (634), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/337 (40%), Positives = 199/337 (59%), Gaps = 26/337 (7%)

Query: 46  HESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SA 101
           H+  ++     +H F  F+ +F + Y S  E   R  IF+ NL+     ++L+     SA
Sbjct: 155 HKKHSHRFDKVDHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTI---EELNANEMGSA 211

Query: 102 THGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVGPV 159
            +GIT+F+D+T +E++    GL ++         A ++P    +LP +FDWR+K AV  V
Sbjct: 212 KYGITEFADMTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQV 270

Query: 160 KDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           K+QGSCGSCW+FS TG +EG   + TG+L   SEQ+L+DCD         + DS CNGGL
Sbjct: 271 KNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGL 321

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANL 278
           M++A++     GGL  E +YPY    + + C F+++     VA F  +   +E  +   L
Sbjct: 322 MDNAYKAIKDIGGLEYEAEYPYKA--KKNQCHFNRTLSHVQVAGFVDLPKGNETAMQEWL 379

Query: 279 VKNGPLAVAINAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYW 335
           + NGP+++ INA  MQ Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  PYW
Sbjct: 380 LANGPISIGINANAMQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNFHKTLPYW 438

Query: 336 IIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           I+KNSWG  WGE GYY++ RG N CGV  M ++   A
Sbjct: 439 IVKNSWGPRWGEQGYYRVYRGDNTCGVSEMATSAVLA 475


>gi|410913409|ref|XP_003970181.1| PREDICTED: cathepsin F-like [Takifugu rubripes]
          Length = 476

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 152/328 (46%), Positives = 197/328 (60%), Gaps = 39/328 (11%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSD 110
           +LLG    F  F  K+NK Y+SQEE D R  IFK NL+ A + Q LD  SA +G+T+FSD
Sbjct: 173 ELLGL---FKEFMTKYNKVYSSQEEADRRLQIFKENLKTAEKIQSLDEGSAEYGVTKFSD 229

Query: 111 LTPAEFRRTYLG-------LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQG 163
           LT  EFR TYL        LRR ++ P    ++P       PA +DWR+ GAV PVK+QG
Sbjct: 230 LTEEEFRLTYLNPLLSQWTLRRPMK-PASPARSPA------PASWDWRDHGAVSPVKNQG 282

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCW+FS TG +EG  FL  GKL+SLSEQ+LVDCD           D  C GGL ++A
Sbjct: 283 LCGSCWAFSVTGNIEGQWFLKHGKLLSLSEQELVDCD---------GLDHACRGGLPSNA 333

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGP 283
           +E     GGL  E DY Y+G      C F   K+AA + +   +  DE+++AA L +NGP
Sbjct: 334 YEAIEGLGGLEAENDYTYSG--HKQKCSFATEKVAAYINSSVELPSDENEMAAWLAENGP 391

Query: 284 LAVAINAVYMQTYIGGVSCPY--ICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           ++VA+NA  MQ Y  GVS P+  +C+   +DH VLLVGYG            P+W IKNS
Sbjct: 392 VSVALNAFAMQFYKKGVSHPWMILCNPWMIDHAVLLVGYGERNGI-------PFWAIKNS 444

Query: 341 WGESWGENGYYKICRGRNVCGVDSMVST 368
           WGE +GE GYY + +G N CG++ M S+
Sbjct: 445 WGEDYGEEGYYYLYKGSNACGINKMGSS 472


>gi|2731635|gb|AAB93494.1| pre-procathepsin L [Paragonimus westermani]
          Length = 325

 Score =  248 bits (634), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 138/317 (43%), Positives = 191/317 (60%), Gaps = 27/317 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+ + KAYA+ E+   RF IFK NL RA ++Q  +  +A +G+TQFSDLT  
Sbjct: 28  ARELYEQFKRDYGKAYAN-EDDQKRFAIFKDNLVRAQQYQTQEQGTAKYGVTQFSDLTNE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EF   YLG R   R+    D+  +      PA  DWREKGAVGPV+ QGSCGSCW+FS T
Sbjct: 87  EFAAMYLGSRIDERV----DRVQLNDLQTAPASVDWREKGAVGPVEHQGSCGSCWAFSVT 142

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
             +EG  FL TG+LVSLS+QQLVDCD           D GC+GG     ++   + GGL 
Sbjct: 143 ANVEGQWFLKTGRLVSLSKQQLVDCDR---------LDHGCSGGYPPYTYKEIKRMGGLE 193

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            +  YPYTG ++  AC+ D+SK+ A + +  V+  +E++ AA L ++GP++  +NA  +Q
Sbjct: 194 LQSAYPYTGWEQ--ACRLDRSKLFAKIDDSIVLEKNEEKQAAWLAEHGPMSTCLNAGPLQ 251

Query: 295 TYIGGVSCP--YICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Y  G+  P  Y CS   L+H VL VGY +        +  PYW ++NSWG  WGENGY+
Sbjct: 252 FYRYGILHPSEYACSPEGLNHAVLTVGYDTE-------RGVPYWTVRNSWGTRWGENGYF 304

Query: 352 KICRGRNVCGVDSMVST 368
           +I RG   CG+D + ++
Sbjct: 305 RIYRGDGTCGIDRLTTS 321


>gi|163914827|ref|NP_001106423.1| cathepsin F precursor [Xenopus (Silurana) tropicalis]
 gi|157423494|gb|AAI53364.1| LOC100127591 protein [Xenopus (Silurana) tropicalis]
          Length = 463

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 135/322 (41%), Positives = 188/322 (58%), Gaps = 23/322 (7%)

Query: 51  NDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFS 109
           +++L     F  F   +NK Y+ QEE   R  IF  NL++A   Q++D  +A +G+T++S
Sbjct: 157 DEMLKTLTLFKDFVTTYNKKYSDQEEAARRLQIFSQNLKKAQMIQEMDQGTAEYGVTKYS 216

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           DLT  EFR  YL      + P    +  I+P    P  +DWR+ GAV  VK+QG CGSCW
Sbjct: 217 DLTEDEFRSLYLNPLLSSK-PLYQMKKAIVPNMSAPDQWDWRDHGAVTEVKNQGMCGSCW 275

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS  G +EG  FL  G LVSLSEQ+LVDCD           D  C GGL ++A+E   K
Sbjct: 276 AFSVIGNIEGQWFLKKGSLVSLSEQELVDCD---------GVDHACAGGLPSNAYEAIEK 326

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GG+  E++Y Y G    + C F  SK++A + +   +  DE++IAA L +NGP+++A+N
Sbjct: 327 LGGIETEQEYSYEG--HKNTCSFSTSKVSAYINSSVEIPKDENEIAAWLAQNGPISIALN 384

Query: 290 AVYMQTYIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A  MQ Y  G+S P+  +C+   +DH VLLVGYG            P+W IKNSWG  WG
Sbjct: 385 AFAMQFYRKGISHPFRILCNPWMIDHAVLLVGYGER-------NGTPFWAIKNSWGTDWG 437

Query: 347 ENGYYKICRGRNVCGVDSMVST 368
           E GYY + RG   CG+++M S+
Sbjct: 438 EQGYYYLYRGTGACGMNTMCSS 459


>gi|118429515|gb|ABK91805.1| cysteine proteinase 7 precursor [Clonorchis sinensis]
          Length = 326

 Score =  248 bits (633), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 141/318 (44%), Positives = 182/318 (57%), Gaps = 28/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL    ++R         + P  D+  D   FDWRE GAVGPV DQG CGSCW+F
Sbjct: 87  EFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G +EG  F  TG L++LSEQQLVDCD+          D GC+GG     +    K G
Sbjct: 143 SVIGNVEGQWFRKTGDLLALSEQQLVDCDY---------LDGGCDGGYPPQTYTAIQKMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG   G  C  DKSK  A +   +++ L E   A  L   GPL+ A+NA 
Sbjct: 194 GLELASDYPYTGV--GGICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSSALNAD 251

Query: 292 YMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            +Q Y GG+  P  C    ++H VL VGYG           KPYWI+KNSWGE +GE GY
Sbjct: 252 TLQLYKGGIMRPKWCDPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGY 304

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++S+V+T
Sbjct: 305 FRIYRGDGTCGINSIVTT 322


>gi|21218381|gb|AAM44058.1|AF510740_1 cathepsin L1 [Schistosoma japonicum]
          Length = 317

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 133/309 (43%), Positives = 192/309 (62%), Gaps = 23/309 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           ++ FK  + K Y  + +++ RF+IFK+NL +A  +Q L+  SA +G+T +SDLT  EF R
Sbjct: 20  YAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTTDEFSR 78

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           T+L    +    ++    P     D+P +FDWREKGAV  VK+QG CGSCW+FSTTG +E
Sbjct: 79  THLTAPWRASSKRNT-IPPRREVGDIPNNFDWREKGAVTEVKNQGMCGSCWAFSTTGNIE 137

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
              F  TGKL+SLSEQQLVDCD         S D GCNGGL ++A+E  ++ GGLM E++
Sbjct: 138 SQWFRKTGKLLSLSEQQLVDCD---------SLDDGCNGGLPSNAYESIIRMGGLMLEDN 188

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           YPY    +   C      +AA + +   ++ DE ++A  L  +  ++V +NA+ +Q Y  
Sbjct: 189 YPYDA--KNEKCHLKVGNVAAYINSSVNLTQDESELAIWLYHHSAISVGMNALLLQFYRH 246

Query: 299 GVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           G+S P+   CS+  LDH VLLVGYG      +  K +P+WI+KNSWG  WGE GY+++ R
Sbjct: 247 GISHPWWIFCSKYLLDHAVLLVGYG------VSEKNEPFWIVKNSWGVEWGEKGYFRMYR 300

Query: 356 GRNVCGVDS 364
           G   CG+++
Sbjct: 301 GDGTCGINT 309


>gi|7219908|gb|AAF40479.1| cystein protease [Clonorchis sinensis]
          Length = 326

 Score =  248 bits (632), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 142/318 (44%), Positives = 182/318 (57%), Gaps = 28/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL    ++R         + P  D+  D   FDWRE GAVGPV DQG CGSCW+F
Sbjct: 87  EFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G + G  F  TG L++LSEQQLVDCD+          D GC+GG     +    K G
Sbjct: 143 SVIGNVVGQWFRKTGHLLALSEQQLVDCDY---------LDDGCDGGYPPQTYTAIQKMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG   G  C  DKSK  A V   +++ L E   A  L   GPL+ A+NA 
Sbjct: 194 GLELASDYPYTGV--GGICHMDKSKFVAYVNGSTILPLSEKVQAQKLRAIGPLSSALNAD 251

Query: 292 YMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            +Q Y GG+  P  C    ++HGVL VGYG           KPYWI+KNSWGE +GE GY
Sbjct: 252 TLQLYKGGIMRPKWCDPAGVNHGVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGY 304

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++S+V+T
Sbjct: 305 FRIYRGDGTCGINSIVTT 322


>gi|4760897|gb|AAD29130.1| cysteine proteinase 1 precursor [Clonorchis sinensis]
          Length = 328

 Score =  247 bits (631), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/325 (44%), Positives = 187/325 (57%), Gaps = 40/325 (12%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPIL-----PTNDLPAD---FDWREKGAVGPVKDQGSCG 166
           EF+  YL +R            PI+     P  D+  D   FDWRE GAVGPV DQG CG
Sbjct: 87  EFKTRYLRMRF---------DGPIVSEDPSPEEDVTMDNEKFDWREHGAVGPVLDQGKCG 137

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FS  G +EG  F  TG L++LSEQQLVDCDH          D GCNGG     +  
Sbjct: 138 SCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDH---------LDKGCNGGYPPKTYGE 188

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
             K GGL    DYPYTG D    C  ++SK  A V   +V+ L E   A  L + GPL+ 
Sbjct: 189 IEKMGGLELASDYPYTGVD--GICYMNQSKFVAYVNESTVLPLSEKIQAQKLKEIGPLSS 246

Query: 287 AINAVYMQTYIGGV--SCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           A+NAV +Q Y+GG+    P++C+   L+H VL VGYG+           PYWI+KNSWG 
Sbjct: 247 ALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGI-------PYWIVKNSWGV 299

Query: 344 SWGENGYYKICRGRNVCGVDSMVST 368
            +GE GY++I RG   CG++ +VST
Sbjct: 300 GFGEKGYFRIFRGAGTCGINLVVST 324


>gi|312378084|gb|EFR24752.1| hypothetical protein AND_10451 [Anopheles darlingi]
          Length = 1785

 Score =  247 bits (630), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 192/323 (59%), Gaps = 31/323 (9%)

Query: 59   HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA---ARHQKLDPSATHGITQFSDLTPAE 115
             F  FK    + YAS  EH+ R+ IF+ NL +     RH++   +  +G+T+F+D+T AE
Sbjct: 1477 QFEKFKLHHQRQYASSFEHEMRYNIFRNNLYKIDQLNRHER--GTGKYGVTKFADMTTAE 1534

Query: 116  FRRTYLGLRRKLRLPKDAD---QAPILPTN----DLPADFDWREKGAVGPVKDQGSCGSC 168
            +R  + GL     +PK      + PI   +     LP  FDWR+ GAV  VK+QG+CGSC
Sbjct: 1535 YR-AHTGLI----VPKQHSNHIRNPIATVSTERTSLPTSFDWRDHGAVTGVKNQGNCGSC 1589

Query: 169  WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
            W+FS  G +EG + + T KL + SEQ+L+DCD         + D+GCNGG M+ AF+   
Sbjct: 1590 WAFSAIGNIEGLHQIKTKKLEAYSEQELIDCD---------TVDNGCNGGYMDDAFKAIE 1640

Query: 229  KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 288
            K GGL  E++YPY    +   C F+K+     V     +  +E  IA  L++NGP+A+ +
Sbjct: 1641 KLGGLELEDEYPYQAKAQ-KTCHFNKTLSHVRVKGAVDMPKNETFIAQYLIENGPIAIGL 1699

Query: 289  NAVYMQTYIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
            NA  MQ Y GG+S P+  +CS +++DHGVL+VGYG   Y P+  K  PYW IKNSWG  W
Sbjct: 1700 NANAMQFYRGGISHPWHLLCSHKQIDHGVLIVGYGVKEY-PLFNKTLPYWTIKNSWGPKW 1758

Query: 346  GENGYYKICRGRNVCGVDSMVST 368
            GE GYY+I RG N CGV  M S+
Sbjct: 1759 GEQGYYRIYRGDNSCGVSEMASS 1781


>gi|308506829|ref|XP_003115597.1| CRE-TAG-196 protein [Caenorhabditis remanei]
 gi|308256132|gb|EFP00085.1| CRE-TAG-196 protein [Caenorhabditis remanei]
          Length = 475

 Score =  247 bits (630), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 189/318 (59%), Gaps = 27/318 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F  +  K Y+++ E   RF  FK N +     QK +  +A +G T+FSD+T  EF++
Sbjct: 172 FLDFIDRHEKRYSNKREVLKRFRTFKKNAKAIRELQKNEQGTAVYGFTKFSDMTTMEFKQ 231

Query: 119 TYLGLRRKLRL-PKDA----DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           T L  + +  + P D      +   +   DLP  FDWR+KGAV  VK+QG+CGSCW+FST
Sbjct: 232 TMLPYQWEQPVYPMDQADFEKEGITISEEDLPESFDWRDKGAVTQVKNQGNCGSCWAFST 291

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TG +EGA FLA  KLVSLSEQ+LVDCD           D GCNGGL ++A++  ++ GGL
Sbjct: 292 TGNVEGAWFLAKNKLVSLSEQELVDCD---------GVDQGCNGGLPSNAYKEIIRMGGL 342

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             E+ YPY G  +G  C   +  IA  +     +  DE ++   LV  GP+++ +NA  +
Sbjct: 343 EPEDAYPYDG--KGETCHLVRKDIAVYINGSIELPHDEVEMQKWLVTKGPISIGLNANTL 400

Query: 294 QTYIGGVSCPY--ICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y  GV  P+   C    L+HGVL+VGYG  G        KPYWI+KNSWG +WGE+GY
Sbjct: 401 QFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDG-------RKPYWIVKNSWGPTWGESGY 453

Query: 351 YKICRGRNVCGVDSMVST 368
           +K+ RG+NVCGV  M ++
Sbjct: 454 FKLYRGKNVCGVQEMATS 471


>gi|194746631|ref|XP_001955780.1| GF16067 [Drosophila ananassae]
 gi|190628817|gb|EDV44341.1| GF16067 [Drosophila ananassae]
          Length = 620

 Score =  247 bits (630), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 135/323 (41%), Positives = 187/323 (57%), Gaps = 20/323 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAE 115
           EH F  F+ +F + Y S  E   R  IF+ NL+        +  SA +GIT+F+D+T  E
Sbjct: 311 EHLFHKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSTE 370

Query: 116 FRRTYLGLRRKLRLPKDADQAPILP--TNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           ++    GL ++           ++P  + +LP +FDWR K AV  VK+QG CGSCW+FS 
Sbjct: 371 YKER-TGLWQRDEAKATGGSPAVVPAYSGELPKEFDWRSKNAVTGVKNQGQCGSCWAFSV 429

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TG +EG   L  G+L   SEQ+L+DCD         + DS CNGGLM++A++     GGL
Sbjct: 430 TGNIEGLYALKYGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGL 480

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E +YPY    +   C F+K+     V +F  +   +E  +   LV NGP+++ INA  
Sbjct: 481 EYEAEYPYEAKKK--QCHFNKTMSHVQVKDFVDLPKGNETAMQEWLVSNGPISIGINANA 538

Query: 293 MQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           MQ Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  PYWI+KNSWG  WGE G
Sbjct: 539 MQFYRGGVSHPWKALCSKKNLDHGVLVVGYGVSDY-PNYHKTLPYWIVKNSWGPRWGEQG 597

Query: 350 YYKICRGRNVCGVDSMVSTVAAA 372
           YY++ RG N CGV  M ++   A
Sbjct: 598 YYRVYRGDNTCGVSEMATSAVLA 620


>gi|85068702|gb|ABC69431.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  247 bits (630), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 140/318 (44%), Positives = 182/318 (57%), Gaps = 28/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL    ++R         + P  D+  D   FDWRE GAVGPV DQG CGSCW+F
Sbjct: 87  EFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G + G  F  TG L++LSEQQLVDCD+          D GC+GG     +    K G
Sbjct: 143 SVIGNVVGQWFRKTGHLLALSEQQLVDCDY---------LDGGCDGGYPPQTYTAIQKMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG   G  C  DKSK  A +   +++ L E   A  L   GPL+ A+NA 
Sbjct: 194 GLELASDYPYTGV--GGICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSSALNAD 251

Query: 292 YMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            +Q Y GG+  P +C    ++H VL VGYG           KPYWI+KNSWGE +GE GY
Sbjct: 252 TLQLYKGGIMRPRLCDPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGY 304

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++S+V+T
Sbjct: 305 FRIYRGDGTCGINSIVTT 322


>gi|340053965|emb|CCC48258.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 441

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 138/318 (43%), Positives = 181/318 (56%), Gaps = 25/318 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FK+K+ ++Y +  E   R  +F+ N+RR+  +   +P AT G+T FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 117 RRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R  Y    R     +   +  + +P    PA  DWR KGAV PVKDQGSCGSCWSFS  G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGSCGSCWSFSAIG 150

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG    A   L SLSEQ LV CD +         D+GC GGLM++AFE+ +K  +G +
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCDTK---------DNGCGGGLMDNAFEWIVKENSGKV 201

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      CK    K+ A++     +  DED IA  L  NGP+AVA++A  
Sbjct: 202 YTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             +Y GGV  SC    S  L+HGVLLVGY  +        + PYWIIKNSW  SWGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 351 YKICRGRNVCGVDSMVST 368
            +I +G N C V  + S+
Sbjct: 312 IRIEKGTNQCLVAQLASS 329


>gi|45822209|emb|CAE47501.1| cathepsin L-like proteinase [Diabrotica virgifera virgifera]
          Length = 325

 Score =  246 bits (629), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 140/319 (43%), Positives = 189/319 (59%), Gaps = 29/319 (9%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFS 109
           L  +  +  FK K NK+Y S  E   RF IF+ NLR+   H +     + +   G+T+F+
Sbjct: 17  LNDKEEWVQFKVKNNKSYKSYVEEQTRFRIFQENLRKIENHNEKYNNGESTFKFGVTKFT 76

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           DLT  EF    L L +  R  +      + P  DLP+ FDWR+KGAV  VKDQG CGSCW
Sbjct: 77  DLTEKEFL-DLLVLSKNARPNRTHATHLLAPLRDLPSAFDWRDKGAVTEVKDQGMCGSCW 135

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FSTTG++E A+FL TG LVSLSEQ LVDC  +       +C  GC GG M+ A EY ++
Sbjct: 136 TFSTTGSVEAAHFLKTGNLVSLSEQNLVDCAKD-------TC-YGCGGGWMDKALEY-IE 186

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAI 288
            GG+M E+DYPY G D    C+FD SK+AA ++NF+ +   DE+ +   +   GP++VAI
Sbjct: 187 KGGIMSEKDYPYEGVDDN--CRFDISKVAAKISNFTYIKKNDEEDLKNAVAAKGPISVAI 244

Query: 289 NA-VYMQTYIGGVSCPYICSRRLD---HGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           +A    Q Y+ G+     CS   D   HGVL+VGYG+          K YWIIKNSWG +
Sbjct: 245 DASATFQLYVSGILDDTECSNEFDSLNHGVLVVGYGTEN-------GKDYWIIKNSWGVN 297

Query: 345 WGENGYYKICRGR-NVCGV 362
           WG +GY ++ R + N CG+
Sbjct: 298 WGMDGYIRMSRNKNNQCGI 316


>gi|226468424|emb|CAX69889.1| Temporarily Assigned Gene name [Schistosoma japonicum]
          Length = 454

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/309 (42%), Positives = 194/309 (62%), Gaps = 23/309 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           ++ FK  + K Y  + +++ RF+IFK+NL +A  +Q L+  SA +G+T +SDLT  EF R
Sbjct: 157 YAQFKLTYRKQY-HETDNEKRFSIFKSNLLKAQLYQVLERGSAVYGVTPYSDLTTDEFSR 215

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           T+L    +    ++   +P     D+P +FDWR+KGAV  VK+QG CGSCW+FSTTG +E
Sbjct: 216 THLTAPWRASSKRNT-ISPRREVGDIPNNFDWRKKGAVTEVKNQGMCGSCWAFSTTGNIE 274

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
              F  TGKL+SLSEQQLVDCD         + D GCNGGL ++A+E  ++ GGLM E++
Sbjct: 275 SQWFRKTGKLLSLSEQQLVDCD---------NLDDGCNGGLPSNAYESIIRMGGLMLEDN 325

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           YPY    +   C    + +AA + +   ++ DE ++A  L  +  ++V +NA+ +Q Y  
Sbjct: 326 YPYDA--KNEKCHLKVANVAAYINSSVNLTQDESELAIWLYHHSAISVGMNALLLQFYRH 383

Query: 299 GVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           G+S P+   CS+  LDH VLLVGYG      +  K +P+WI+KNSWG  WGE GY+++ R
Sbjct: 384 GISHPWWIFCSKYLLDHAVLLVGYG------VSEKNEPFWIVKNSWGVEWGEKGYFRMYR 437

Query: 356 GRNVCGVDS 364
           G   CG+++
Sbjct: 438 GDGTCGINT 446


>gi|67773372|gb|AAY81943.1| cysteine protease 5 [Paragonimus westermani]
          Length = 325

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/319 (43%), Positives = 186/319 (58%), Gaps = 31/319 (9%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+ + K YA+ ++   RF IFK NL RA + Q  D  +A +G+TQFSDLTP 
Sbjct: 28  ARELYEQFKRDYGKVYANDDDQ-KRFAIFKDNLVRAQKLQLKDRGTARYGVTQFSDLTPE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPT--NDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF   YL        P +     + PT     P   DWRE GAVGPV++QGSCGSCW+FS
Sbjct: 87  EFAAKYLSR------PMNDQVERVRPTGLKAAPERMDWREWGAVGPVENQGSCGSCWAFS 140

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
             G +EG  FL TG+LVSLS+QQLVDCD           D GC GG   +A+   ++ GG
Sbjct: 141 VAGNVEGQWFLKTGQLVSLSKQQLVDCD---------VMDYGCGGGWPTNAYMEIMRMGG 191

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  + DYPY G  +   C  +K K+ A + +  V+   E++ AA L ++GPL+ A+NA Y
Sbjct: 192 LELQSDYPYVGVQQ--QCYLNKEKLLAKIDDLIVLGAYEEEHAAYLAEHGPLSSALNAGY 249

Query: 293 MQTYIGGVSCPYI--CS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           +Q Y  G+S P    CS   L+H VL VGY +           PYWIIKNSWG  WGENG
Sbjct: 250 LQFYQSGISHPSYEECSPASLNHAVLTVGYDTE-------NGVPYWIIKNSWGTGWGENG 302

Query: 350 YYKICRGRNVCGVDSMVST 368
           Y+++ RG   CG++ M+++
Sbjct: 303 YFRLYRGDGTCGINRMITS 321


>gi|343412462|emb|CCD21670.1| cysteine peptidase (CP), putative [Trypanosoma vivax Y486]
          Length = 367

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 181/318 (56%), Gaps = 25/318 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FK+K+ ++Y +  E   R  +F+ N+RR+  +   +P AT G+T FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 117 RRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R  Y    R     +   +  + +P    PA  DWR KGAV PVKDQG+CGSCWSFS  G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGTCGSCWSFSAIG 150

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG    A   L SLSEQ LV CD +         D+GC GGLM++AFE+ +K  +G +
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCDTK---------DNGCGGGLMDNAFEWIVKENSGKV 201

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      CK    K+ A++     +  DED IA  L  NGP+AVA++A  
Sbjct: 202 YTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             +Y GGV  SC    S  L+HGVLLVGY  +        + PYWIIKNSW  SWGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 351 YKICRGRNVCGVDSMVST 368
            +I +G N C V  + S+
Sbjct: 312 IRIEKGTNQCLVAQLASS 329


>gi|116242314|gb|ABJ89814.1| cysteine protease preprotein [Clonorchis sinensis]
          Length = 326

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/318 (44%), Positives = 181/318 (56%), Gaps = 28/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL    ++R         + P  D+  D   FDWRE GAVGPV DQG CGSCW+F
Sbjct: 87  EFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G + G  F  TG L++LSEQQLVDCD+          D GC+GG     +    K G
Sbjct: 143 SVIGNVVGQWFRKTGHLLALSEQQLVDCDY---------LDDGCDGGYPPQTYTAIQKMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG   G  C  DKSK  A V   +++ L E   A  L   GPL+ A+NA 
Sbjct: 194 GLELASDYPYTGV--GGICHMDKSKFVAYVNGSTILPLSEKVQAQKLRAIGPLSSALNAD 251

Query: 292 YMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            +Q Y GG+  P  C    ++H VL VGYG           KPYWI+KNSWGE +GE GY
Sbjct: 252 TLQLYKGGIMRPKWCDPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGY 304

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++S+V+T
Sbjct: 305 FRIYRGDGTCGINSIVTT 322


>gi|72389861|ref|XP_845225.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389863|ref|XP_845226.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359933|gb|AAX80358.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359934|gb|AAX80359.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801760|gb|AAZ11666.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801761|gb|AAZ11667.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 184/323 (56%), Gaps = 35/323 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EF
Sbjct: 38  EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEF 97

Query: 117 RR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           R       +Y    +K RL K  +    + T   PA  DWREKGAV PVKDQG CGSCW+
Sbjct: 98  RARYRNGASYFAAAQK-RLRKTVN----VTTGRAPAAVDWREKGAVTPVKDQGQCGSCWA 152

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST G +EG   +A   LVSLSEQ LV CD         + DSGCNGGLM++AF + + +
Sbjct: 153 FSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNS 203

Query: 231 --GGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
             G +  E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A
Sbjct: 204 NGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIA 263

Query: 288 INAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           ++A     Y GG+  SC    S +LDHGVLLVGY             PYWIIKNSW   W
Sbjct: 264 VDATSFMDYNGGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMW 313

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE+GY +I +G N C ++  VS+
Sbjct: 314 GEDGYIRIEKGTNQCLMNQAVSS 336


>gi|72389847|ref|XP_845218.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389849|ref|XP_845219.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389851|ref|XP_845220.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389857|ref|XP_845223.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359926|gb|AAX80351.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359927|gb|AAX80352.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359928|gb|AAX80353.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359931|gb|AAX80356.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801753|gb|AAZ11659.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801754|gb|AAZ11660.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801755|gb|AAZ11661.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801758|gb|AAZ11664.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 450

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 184/323 (56%), Gaps = 35/323 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EF
Sbjct: 38  EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEF 97

Query: 117 RR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           R       +Y    +K RL K  +    + T   PA  DWREKGAV PVKDQG CGSCW+
Sbjct: 98  RARYRNGASYFAAAQK-RLRKTVN----VTTGRAPAAVDWREKGAVTPVKDQGQCGSCWA 152

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST G +EG   +A   LVSLSEQ LV CD         + DSGCNGGLM++AF + + +
Sbjct: 153 FSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNS 203

Query: 231 --GGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
             G +  E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A
Sbjct: 204 NGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIA 263

Query: 288 INAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           ++A     Y GG+  SC    S +LDHGVLLVGY             PYWIIKNSW   W
Sbjct: 264 VDATSFMDYNGGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMW 313

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE+GY +I +G N C ++  VS+
Sbjct: 314 GEDGYIRIEKGTNQCLMNQAVSS 336


>gi|72389855|ref|XP_845222.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389865|ref|XP_845227.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|72389867|ref|XP_845228.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359930|gb|AAX80355.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359935|gb|AAX80360.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|62359936|gb|AAX80361.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801757|gb|AAZ11663.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801762|gb|AAZ11668.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|70801763|gb|AAZ11669.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 184/323 (56%), Gaps = 35/323 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EF
Sbjct: 38  EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEF 97

Query: 117 RR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           R       +Y    +K RL K  +    + T   PA  DWREKGAV PVKDQG CGSCW+
Sbjct: 98  RARYRNGASYFAAAQK-RLRKTVN----VTTGRAPAAVDWREKGAVTPVKDQGQCGSCWA 152

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST G +EG   +A   LVSLSEQ LV CD         + DSGCNGGLM++AF + + +
Sbjct: 153 FSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNS 203

Query: 231 --GGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
             G +  E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A
Sbjct: 204 NGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIA 263

Query: 288 INAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           ++A     Y GG+  SC    S +LDHGVLLVGY             PYWIIKNSW   W
Sbjct: 264 VDATSFMDYNGGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMW 313

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE+GY +I +G N C ++  VS+
Sbjct: 314 GEDGYIRIEKGTNQCLMNQAVSS 336


>gi|72389853|ref|XP_845221.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359929|gb|AAX80354.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801756|gb|AAZ11662.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 449

 Score =  245 bits (626), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 184/323 (56%), Gaps = 35/323 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EF
Sbjct: 38  EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEF 97

Query: 117 RR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           R       +Y    +K RL K  +    + T   PA  DWREKGAV PVKDQG CGSCW+
Sbjct: 98  RARYRNGASYFAAAQK-RLRKTVN----VTTGRAPAAVDWREKGAVTPVKDQGQCGSCWA 152

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST G +EG   +A   LVSLSEQ LV CD         + DSGCNGGLM++AF + + +
Sbjct: 153 FSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNS 203

Query: 231 --GGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
             G +  E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A
Sbjct: 204 NGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIA 263

Query: 288 INAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           ++A     Y GG+  SC    S +LDHGVLLVGY             PYWIIKNSW   W
Sbjct: 264 VDATSFMDYNGGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMW 313

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE+GY +I +G N C ++  VS+
Sbjct: 314 GEDGYIRIEKGTNQCLMNQAVSS 336


>gi|268554660|ref|XP_002635317.1| C. briggsae CBR-TAG-196 protein [Caenorhabditis briggsae]
          Length = 477

 Score =  244 bits (624), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 136/318 (42%), Positives = 190/318 (59%), Gaps = 27/318 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F  +  K Y+++ E   RF  FK N +     QK +  SA +G T+FSD+T  EF++
Sbjct: 174 FLDFIDRHEKRYSNKREVLKRFRTFKKNAKVIRELQKNEQGSAVYGFTKFSDMTTMEFKQ 233

Query: 119 TYLGLRRKLRLPKDAD-----QAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           T L  + +  +   A+     +   +  +DLP  FDWR+ GAV  VK+QG+CGSCW+FST
Sbjct: 234 TMLPYQWEQPVYPMAEADFEKEGVTISEDDLPDSFDWRDHGAVTQVKNQGNCGSCWAFST 293

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TG +EGA +LA  KLVSLSEQ+LVDCD         S D GCNGGL ++A++  ++ GGL
Sbjct: 294 TGNVEGAWYLAKKKLVSLSEQELVDCD---------SVDQGCNGGLPSNAYKEIMRMGGL 344

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             E+ YPY G  +G  C   +  IA  +     +  DE +I   LV  GP+++ +NA  +
Sbjct: 345 EPEDAYPYDG--KGETCHIVRKDIAVYINGSVELPHDEVKIQKWLVTKGPISIGLNANTL 402

Query: 294 QTYIGGVSCPY--ICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y  GV  P+   C    L+HGVL+VGYG  G        KPYWI+KNSWG +WGE+GY
Sbjct: 403 QFYRHGVVHPFKIFCEPFMLNHGVLIVGYGKDG-------RKPYWIVKNSWGPTWGESGY 455

Query: 351 YKICRGRNVCGVDSMVST 368
           +++ RG+NVCGV  M ++
Sbjct: 456 FRLYRGKNVCGVQEMATS 473


>gi|85068704|gb|ABC69432.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  244 bits (623), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 141/318 (44%), Positives = 180/318 (56%), Gaps = 28/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF   YL    ++R         + P  D+  D   FDWRE GAVGPV DQG CGSCW+F
Sbjct: 87  EFETRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G + G  F  TG L++LSEQQLVDCD+          D GC+GG     +    K G
Sbjct: 143 SVIGNVVGQWFRKTGHLLALSEQQLVDCDY---------LDDGCDGGYPPQTYTAIQKMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG   G  C  DKSK  A V   +++ L E   A  L   GPL+ A+NA 
Sbjct: 194 GLELASDYPYTGV--GGICHMDKSKFVAYVNGSTILPLSEKVQAQKLRAIGPLSSALNAD 251

Query: 292 YMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            +Q Y GG+  P  C    ++H VL VGYG           KPYWI+KNSWGE +GE GY
Sbjct: 252 TLQLYKGGIMRPKWCDPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGY 304

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++S+V+T
Sbjct: 305 FRIYRGDGTCGINSIVTT 322


>gi|85068698|gb|ABC69429.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  244 bits (623), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/323 (43%), Positives = 183/323 (56%), Gaps = 38/323 (11%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPIL-----PTNDLPAD---FDWREKGAVGPVKDQGSCG 166
           EF+  YL +R            PI+     P  D+  D   FDWRE GAVGPV DQG CG
Sbjct: 87  EFKTRYLRMRF---------DGPIVSEDPSPEEDVTMDNEKFDWREHGAVGPVLDQGKCG 137

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FS  G + G  F  TG L++LSEQQLVDCD+          D GC+GG     +  
Sbjct: 138 SCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDY---------LDGGCDGGYPPQTYTA 188

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
             K GGL    DYPYTG   G  C  DKSK  A +   +++ L E   A  L   GPL+ 
Sbjct: 189 IQKMGGLELASDYPYTGV--GGICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSS 246

Query: 287 AINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           A+NA  +Q Y GG+  P +C    ++H VL VGYG           KPYWI+KNSWGE +
Sbjct: 247 ALNADTLQLYKGGIMRPRLCDPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDF 299

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE GY++I RG   CG++S+V+T
Sbjct: 300 GEEGYFRIYRGDGTCGINSIVTT 322


>gi|417401303|gb|JAA47542.1| Putative cathepsin f [Desmodus rotundus]
          Length = 459

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 140/319 (43%), Positives = 183/319 (57%), Gaps = 35/319 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y ++EE   R +IF  N+ RA   Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 162 FKHFIATYNRTYETEEEAQWRMSIFINNMVRAQEIQALDRGTAQYGVTKFSDLTEEEFRT 221

Query: 119 TYL------GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            YL      GL +K+RL K  D       +  P ++DWR KGAV  VK+QG CGSCW+FS
Sbjct: 222 FYLNPLLKEGLGKKMRLAKPVD-------DPAPPEWDWRNKGAVTKVKNQGMCGSCWAFS 274

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG +EG  FL  G L+SLSEQ+LVDCD         + D  C GGL ++A+      GG
Sbjct: 275 VTGNVEGQWFLKQGDLLSLSEQELVDCD---------TLDKACMGGLPSNAYSAIKTLGG 325

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  E+DY Y G      C F   K+   + +   +S DE ++AA L K GP+++AINA  
Sbjct: 326 LETEDDYSYHG--HLQTCSFTAEKVKVYINDSVELSKDEQKLAAWLAKKGPISIAINAFG 383

Query: 293 MQTYIGGVSCP--YICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           MQ Y  G+S P   +CS   +DH VLLVGYG+         + P+W IKNSWG  WGE G
Sbjct: 384 MQFYRRGISRPLRLLCSPWFIDHAVLLVGYGNRS-------DVPFWAIKNSWGTDWGEEG 436

Query: 350 YYKICRGRNVCGVDSMVST 368
           YY + RG   CGV+ M S+
Sbjct: 437 YYYLHRGSRACGVNVMASS 455


>gi|340053963|emb|CCC48256.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 452

 Score =  244 bits (622), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 137/319 (42%), Positives = 180/319 (56%), Gaps = 25/319 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FK+K+ ++Y +  E   R  +F+ N+RR+  +   +P AT G+T FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 117 RRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R  Y    R     +   +  + +P    PA  DWR KGAV PVKDQGSCGSCWSFS  G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGSCGSCWSFSAIG 150

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG    A   L SLSEQ LV CD         S D+GC GG M++AFE+ +K  +G +
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCD---------SKDNGCGGGFMDNAFEWIVKENSGKV 201

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      CK    ++ A++     +  DED IA  L  NGP+AVA++A  
Sbjct: 202 YTEKSYPYVSGGGEEPPCKPRGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             +Y GGV  SC    S  L+HGVLLVGY  +        + PYWIIKNSW  SWGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 351 YKICRGRNVCGVDSMVSTV 369
            +I +G N C V  + S+ 
Sbjct: 312 IRIEKGTNQCLVAQLASSA 330


>gi|30575714|gb|AAP33049.1| cysteine proteinase 1 [Clonorchis sinensis]
          Length = 326

 Score =  243 bits (621), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 140/318 (44%), Positives = 180/318 (56%), Gaps = 28/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  F  K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFTLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL    ++R         + P  D+  D   FDWRE GAVGPV DQG CGSCW+F
Sbjct: 87  EFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G + G  F  TG L++LSEQQLVDCD+          D GC+GG     +    K G
Sbjct: 143 SVIGNVVGQWFRKTGHLLALSEQQLVDCDY---------LDDGCDGGYPPQTYTAIQKMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG   G  C  DKSK  A V   +++ L E   A  L   GPL+ A+NA 
Sbjct: 194 GLELASDYPYTGV--GGICHMDKSKFVAYVNGSTILPLSEKVQAQKLRAIGPLSSALNAD 251

Query: 292 YMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            +Q Y GG+  P  C    ++H VL VGYG           KPYWI+KNSWGE +GE GY
Sbjct: 252 TLQLYKGGIMRPKWCDPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEKGY 304

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++S+V+T
Sbjct: 305 FRIYRGDGTCGINSIVTT 322


>gi|198453932|ref|XP_002137768.1| GA27408, isoform A [Drosophila pseudoobscura pseudoobscura]
 gi|198132577|gb|EDY68326.1| GA27408, isoform A [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  243 bits (621), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 132/322 (40%), Positives = 189/322 (58%), Gaps = 18/322 (5%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAE 115
           +H F  F+ +F + Y +  E   R  IF+ NL+        +  SA +GIT+F+D+T  E
Sbjct: 320 DHLFHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTE 379

Query: 116 FR-RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           ++ RT L  R + +    A         + P +FDWR+K AV PVK+QGSCGSCW+FS T
Sbjct: 380 YKERTGLWQRDEQKPTGGAPAVVPAYEGEFPKEFDWRQKNAVTPVKNQGSCGSCWAFSVT 439

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G +EG   + TG+L   SEQ+L+DCD         + DS CNGGLM++A++     GGL 
Sbjct: 440 GNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLE 490

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYM 293
            E +YPY    +   C F+++     V+ F  +   +E  +   L+ +GP+++ +NA  M
Sbjct: 491 YEAEYPYEA--KKQQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAM 548

Query: 294 QTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  PYWI+KNSWG  WGE GY
Sbjct: 549 QFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGY 607

Query: 351 YKICRGRNVCGVDSMVSTVAAA 372
           Y++ RG N CGV  M ++   A
Sbjct: 608 YRVYRGDNTCGVSEMATSAVLA 629


>gi|195152617|ref|XP_002017233.1| GL22196 [Drosophila persimilis]
 gi|194112290|gb|EDW34333.1| GL22196 [Drosophila persimilis]
          Length = 627

 Score =  243 bits (621), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 132/322 (40%), Positives = 189/322 (58%), Gaps = 18/322 (5%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAE 115
           +H F  F+ +F + Y +  E   R  IF+ NL+        +  SA +GIT+F+D+T  E
Sbjct: 318 DHLFHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTE 377

Query: 116 FR-RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           ++ RT L  R + +    A         + P +FDWR+K AV PVK+QGSCGSCW+FS T
Sbjct: 378 YKERTGLWQRDEQKPTGGAPAVVPAYEGEFPKEFDWRQKNAVTPVKNQGSCGSCWAFSVT 437

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G +EG   + TG+L   SEQ+L+DCD         + DS CNGGLM++A++     GGL 
Sbjct: 438 GNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLE 488

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYM 293
            E +YPY    +   C F+++     V+ F  +   +E  +   L+ +GP+++ +NA  M
Sbjct: 489 YEAEYPYEA--KKQQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAM 546

Query: 294 QTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  PYWI+KNSWG  WGE GY
Sbjct: 547 QFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGY 605

Query: 351 YKICRGRNVCGVDSMVSTVAAA 372
           Y++ RG N CGV  M ++   A
Sbjct: 606 YRVYRGDNTCGVSEMATSAVLA 627


>gi|38683931|gb|AAR27011.1| cysteine protease [Periserrula leucophryna]
          Length = 283

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/294 (46%), Positives = 178/294 (60%), Gaps = 21/294 (7%)

Query: 80  RFTIFKANLRRAARHQKLD-PSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI 138
           RF IF+ N+++       +   A +G+TQFSDL   EFRR YL  +  L    D  +A I
Sbjct: 2   RFKIFRENMKKINTLNDNELGDAEYGVTQFSDLAEEEFRRYYLTPKWDLSHRPDLVRAKI 61

Query: 139 LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVD 198
            P  D PA FDWR+  AV PVK+QG CGSCW+FSTT  +EG   +   KLVSLSEQ+LVD
Sbjct: 62  -PDVDPPASFDWRDHNAVTPVKNQGMCGSCWAFSTTENIEGQWAIHRNKLVSLSEQELVD 120

Query: 199 CDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIA 258
           CD           D GC GGL  +A+E  ++ GGL  E+ YPY   D    CKF    +A
Sbjct: 121 CD---------KLDDGCEGGLPVNAYEEIIRLGGLESEKKYPYDAEDE--KCKFTVGDVA 169

Query: 259 ASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP--YICS-RRLDHGVL 315
             + +   +S +E  +AA L KNGP+++ INA  MQ Y+GGVS P  ++CS   LDHGVL
Sbjct: 170 VYINSSVNISSNEADMAAWLYKNGPISIGINAFAMQFYMGGVSHPFSFLCSPDELDHGVL 229

Query: 316 LVGYGS-AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           +VGYG+  G+      + PYWI+KNSWG SWG  GYY + RG  VCG++ M ++
Sbjct: 230 IVGYGTKKGW----FSDSPYWIVKNSWGASWGVQGYYLVYRGDGVCGLNKMPTS 279


>gi|390178852|ref|XP_003736743.1| GA27408, isoform B [Drosophila pseudoobscura pseudoobscura]
 gi|388859612|gb|EIM52816.1| GA27408, isoform B [Drosophila pseudoobscura pseudoobscura]
          Length = 477

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/322 (40%), Positives = 189/322 (58%), Gaps = 18/322 (5%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAE 115
           +H F  F+ +F + Y +  E   R  IF+ NL+        +  SA +GIT+F+D+T  E
Sbjct: 168 DHLFHKFQIRFGRRYDNTAERQMRLRIFRQNLKTIEELNTNEMGSAKYGITEFADMTSTE 227

Query: 116 FR-RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           ++ RT L  R + +    A         + P +FDWR+K AV PVK+QGSCGSCW+FS T
Sbjct: 228 YKERTGLWQRDEQKPTGGAPAVVPAYEGEFPKEFDWRQKNAVTPVKNQGSCGSCWAFSVT 287

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G +EG   + TG+L   SEQ+L+DCD         + DS CNGGLM++A++     GGL 
Sbjct: 288 GNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAIKDIGGLE 338

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYM 293
            E +YPY    +   C F+++     V+ F  +   +E  +   L+ +GP+++ +NA  M
Sbjct: 339 YEAEYPYEA--KKQQCHFNRTLSHVQVSGFVDLPKGNETAMQEWLLTHGPISIGLNANAM 396

Query: 294 QTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y GGVS P+  +CS++ LDHGVL+VGYG + Y P   K  PYWI+KNSWG  WGE GY
Sbjct: 397 QFYRGGVSHPWKALCSKKNLDHGVLIVGYGVSDY-PNFHKTLPYWIVKNSWGPRWGEQGY 455

Query: 351 YKICRGRNVCGVDSMVSTVAAA 372
           Y++ RG N CGV  M ++   A
Sbjct: 456 YRVYRGDNTCGVSEMATSAVLA 477


>gi|85068706|gb|ABC69433.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/318 (44%), Positives = 180/318 (56%), Gaps = 28/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL    ++R         + P  D+  D   FDWRE GAVGPV DQG CGSCW+F
Sbjct: 87  EFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G + G  F  TG L++LS QQLVDCD+          D GC+GG     +    K G
Sbjct: 143 SVIGNVVGQWFRETGHLLALSGQQLVDCDY---------LDDGCDGGYPPQTYTAIQKMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG   G  C  DKSK  A V   +++ L E   A  L   GPL+ A+NA 
Sbjct: 194 GLELASDYPYTGV--GGICHMDKSKFVAYVNGSTILPLSEKVQAQKLRAIGPLSSALNAD 251

Query: 292 YMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            +Q Y GG+  P  C    ++H VL VGYG           KPYWI+KNSWGE +GE GY
Sbjct: 252 TLQLYKGGIMRPKWCDPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGY 304

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++S+V+T
Sbjct: 305 FRIYRGDGTCGINSIVTT 322


>gi|16076439|emb|CAC94444.1| cysteine proteinase [Betula pendula]
          Length = 133

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 113/134 (84%), Positives = 125/134 (93%), Gaps = 1/134 (0%)

Query: 200 DHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAA 259
           DHECDPEE G+CDSGC+GGLM +AFEYTLKAGGL RE+DYPYTGTDRG +CKFDKSKIAA
Sbjct: 1   DHECDPEEYGACDSGCSGGLMTTAFEYTLKAGGLEREKDYPYTGTDRG-SCKFDKSKIAA 59

Query: 260 SVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGY 319
           SV+NFSVVS+DEDQIAANLVKNGPLA+ INA +MQTY+ GVSCPYIC RRLDHGVLLVGY
Sbjct: 60  SVSNFSVVSIDEDQIAANLVKNGPLAIGINAAFMQTYMKGVSCPYICGRRLDHGVLLVGY 119

Query: 320 GSAGYAPIRLKEKP 333
           GSAG++PIR KEKP
Sbjct: 120 GSAGFSPIRFKEKP 133


>gi|85068712|gb|ABC69436.1| cysteine protease [Clonorchis sinensis]
          Length = 328

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 187/325 (57%), Gaps = 40/325 (12%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPIL-----PTNDLPAD---FDWREKGAVGPVKDQGSCG 166
           EF+  YL +R            PI+     P  D+  D   FDWRE GAVGPV DQG CG
Sbjct: 87  EFKTRYLRMRF---------DGPIVSEDPSPEEDVTMDNEKFDWREHGAVGPVLDQGKCG 137

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FS  G +EG  F  TG L++LSEQQLVDCDH          + GCNGG     +  
Sbjct: 138 SCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDH---------LEKGCNGGYPPKTYGE 188

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
             K GGL    DYPYTG D    C  ++SK  A V + +V+ L E   A  L + GPL+ 
Sbjct: 189 IEKMGGLELASDYPYTGVD--GICYMNQSKFVAYVNDSTVLPLSEKIQAQKLKEIGPLSS 246

Query: 287 AINAVYMQTYIGGV--SCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           A+NAV +Q Y+GG+    P++C+   L+H VL VGYG+           PYWI+KNS G 
Sbjct: 247 ALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGYGTEFGI-------PYWIVKNSLGV 299

Query: 344 SWGENGYYKICRGRNVCGVDSMVST 368
            +GE GY++I RG   CG++ +VST
Sbjct: 300 GFGEKGYFRIFRGAGTCGINLVVST 324


>gi|118156|sp|P14658.1|CYSP_TRYBB RecName: Full=Cysteine proteinase; Flags: Precursor
 gi|10393|emb|CAA34485.1| unnamed protein product [Trypanosoma brucei]
          Length = 450

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 184/323 (56%), Gaps = 35/323 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EF
Sbjct: 38  EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEF 97

Query: 117 RR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           R       +Y    +K RL K  +    + T   PA  DWREKGAV PVK QG CGSCW+
Sbjct: 98  RARYRNGASYFAAAQK-RLRKTVN----VTTGRAPAAVDWREKGAVTPVKVQGQCGSCWA 152

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST G +EG   +A   LVSLSEQ LV CD         + DSGCNGGLM++AF + + +
Sbjct: 153 FSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNS 203

Query: 231 --GGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
             G +  E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A
Sbjct: 204 NGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIA 263

Query: 288 INAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           ++A     Y GG+  SC    S++LDHGVLLVGY             PYWIIKNSW   W
Sbjct: 264 VDAESFMDYNGGILTSC---TSKQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMW 313

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE+GY +I +G N C ++  VS+
Sbjct: 314 GEDGYIRIEKGTNQCLMNQAVSS 336


>gi|432091081|gb|ELK24293.1| Cathepsin F, partial [Myotis davidii]
          Length = 410

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 184/322 (57%), Gaps = 35/322 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y ++EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 113 FKYFITTYNRTYETEEEAQWRMSVFINNMIRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 172

Query: 119 TYLG------LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            YL       L +K+RL K          +  P ++DWR+KGAV  VK+QG CGSCW+FS
Sbjct: 173 MYLNPLLKEELGKKMRLVK-------FVGDPAPPEWDWRKKGAVTKVKNQGMCGSCWAFS 225

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG +EG  FL  G L+SLSEQ+LVDCD           D  C GGL ++A+      GG
Sbjct: 226 VTGNVEGQWFLKRGDLLSLSEQELVDCD---------KVDKACMGGLPSNAYSAIKTLGG 276

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  E+DY Y+G      C F   K    + +   +S +E ++AA L KNGP+++AINA  
Sbjct: 277 LETEDDYSYSG--HLQTCSFSAQKAKVYINDSVELSHNEQELAAWLAKNGPISIAINAFG 334

Query: 293 MQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           MQ Y  G+S P   +CSR  +DH VLLVGYG+         + P+W IKNSWG  WGE G
Sbjct: 335 MQFYRHGISRPLRPLCSRWFIDHAVLLVGYGNRS-------DVPFWAIKNSWGTDWGEEG 387

Query: 350 YYKICRGRNVCGVDSMVSTVAA 371
           YY + RG   CGV+ M S+   
Sbjct: 388 YYYLHRGSGACGVNVMASSAVV 409


>gi|85068700|gb|ABC69430.1| cysteine protease [Clonorchis sinensis]
          Length = 326

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/318 (43%), Positives = 180/318 (56%), Gaps = 28/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q+++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFEIFKDNLLRAKRLQEMEQGTAQYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL    ++R         + P  D+  D   FDWRE GAVGPV DQG CGSCW+F
Sbjct: 87  EFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAVGPVLDQGKCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G + G  F  TG L++LSEQ LVDCD+          D GC+GG          K G
Sbjct: 143 SVIGNVVGQWFRKTGHLLALSEQPLVDCDY---------LDGGCDGGYPPQTNTAIQKMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG   G  C  DKSK  A +   +++ L E   A  L   GPL+ A+NA 
Sbjct: 194 GLELASDYPYTGV--GGICYMDKSKFVAYINGSTILPLSEKVQAQKLRAIGPLSSALNAD 251

Query: 292 YMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            +Q Y GG+  P +C    ++H VL VGYG           KPYWI+KNSWGE +GE GY
Sbjct: 252 TLQLYKGGIMRPRLCDPAGVNHAVLTVGYGVQ-------NGKPYWIVKNSWGEDFGEEGY 304

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++S+V+T
Sbjct: 305 FRIYRGDGTCGINSIVTT 322


>gi|15485586|emb|CAC67416.1| cysteine protease [Trypanosoma brucei rhodesiense]
          Length = 450

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 183/323 (56%), Gaps = 35/323 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EF
Sbjct: 38  EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEF 97

Query: 117 RR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           R       +Y    +K RL K  +    + T   PA  DWREKGAV PVKDQG CGSCW+
Sbjct: 98  RARYRNGASYFAAAQK-RLRKTVN----VTTGRAPAAVDWREKGAVTPVKDQGQCGSCWA 152

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST G +EG   +A   LVSLSEQ LV CD         + D GC GGLM++AF + + +
Sbjct: 153 FSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNS 203

Query: 231 --GGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
             G +  E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A
Sbjct: 204 NGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIA 263

Query: 288 INAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           ++A     Y GG+  SC    S +LDHGVLLVGY  +          PYWIIKNSW   W
Sbjct: 264 VDATSFMDYNGGILTSC---TSEQLDHGVLLVGYNDS-------SNPPYWIIKNSWSNMW 313

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE+GY +I +G N C ++  VS+
Sbjct: 314 GEDGYIRIEKGTNQCLMNQAVSS 336


>gi|391336140|ref|XP_003742440.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 191/322 (59%), Gaps = 29/322 (9%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA---THGITQFSDLT 112
           AE H++ FK    K+Y   +E   R  IF+ NL       +++ S    T G+ +F+D+T
Sbjct: 24  AEPHWNAFKSTHLKSYRDGQEELIRRFIFEDNLHTIEEFNRVNASLAGFTLGVNEFADMT 83

Query: 113 PAEFRRTYLGLRRKLRLPKDA--DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
             EF    LGL  + ++  D+  + + +    DLPA+ DW +KG V  VK+QG CGSCW+
Sbjct: 84  NTEFSNMLLGLGGRNKIAGDSVFESSHV---QDLPAEVDWTQKGYVTEVKNQGQCGSCWA 140

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTG+LEG  F  TGKLVSLSEQ LVDC            + GCNGGLM+ AF Y  K 
Sbjct: 141 FSTTGSLEGQVFKKTGKLVSLSEQNLVDCS-------TSEGNQGCNGGLMDQAFTYIKKN 193

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
           GG+  E  YPYTG+D    C+F ++K+ A+V+ F  V S DE+ +   +   GP++VAI+
Sbjct: 194 GGIDTEAAYPYTGSD--GTCRFLENKVGATVSGFVDVKSGDENALKEAVATVGPISVAID 251

Query: 290 A--VYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A  ++ Q Y GGV  P+ CS   LDHGVL+VGYG+ G        K YW++KNSWG SWG
Sbjct: 252 ASSIFFQFYRGGVYNPWFCSSTELDHGVLVVGYGTEG-------GKDYWLVKNSWGSSWG 304

Query: 347 ENGYYKICRG-RNVCGVDSMVS 367
             GY K+ R  +N CG+ +  S
Sbjct: 305 LKGYIKMVRNKKNRCGIATQAS 326


>gi|56718881|gb|AAW28151.1| westerpain-1 [Paragonimus westermani]
          Length = 322

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 183/323 (56%), Gaps = 38/323 (11%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+ + K YA++++   RF IFK NL RA + Q  D  +A +G+TQFSDLTP 
Sbjct: 23  ARELYEQFKRDYGKVYANEDDQ-KRFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPE 81

Query: 115 EFRRTYLGLRRKLRLPKDADQAP-ILPT--NDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           EF   YL        P + DQ   + PT     P   DWR KGAV  V++QGSCGSCW+F
Sbjct: 82  EFAAKYLSA------PVNNDQVKRVRPTGLKAAPERIDWRAKGAVTAVENQGSCGSCWAF 135

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           ST G +EG  F+ TG+LVSLS+QQLVDCD             GCNGG   S++   +  G
Sbjct: 136 STAGNVEGQWFIKTGQLVSLSKQQLVDCDRAA---------QGCNGGWPASSYLEIMYMG 186

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  E DYPY G +    C  +K K+ A + +  V+  +E+  AA L ++GPL+  +NAV
Sbjct: 187 GLESESDYPYVGVE--QTCALNKEKLVAKIDDSIVLGPEEEDHAAYLAEHGPLSTLLNAV 244

Query: 292 YMQTYIGGV------SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
            +Q Y  GV       CP      L+H VL VGY   G       + PYWIIKNSWG  W
Sbjct: 245 ALQYYQSGVLKPTFEECP---DTELNHAVLTVGYDKEG-------DMPYWIIKNSWGTDW 294

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE GY+++ RG   CG++ M ++
Sbjct: 295 GEKGYFRLFRGDCTCGINRMATS 317


>gi|67773382|gb|AAY81948.1| cysteine protease 11 [Paragonimus westermani]
          Length = 322

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 136/323 (42%), Positives = 186/323 (57%), Gaps = 38/323 (11%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+ + K YA++++   RF IFK NL RA + Q  D  +A +G+TQFSDLTP 
Sbjct: 23  ARELYEQFKRDYGKVYANEDDQ-KRFAIFKDNLVRAQKLQLRDQGTARYGVTQFSDLTPE 81

Query: 115 EFRRTYLGLRRKLRLPKDADQAP-ILPT--NDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           EF   YL        P ++DQ   + PT     P   DWR KGAV PV++QG CGSCW+F
Sbjct: 82  EFAAKYLSP------PLNSDQVERVQPTGLKAAPERMDWRAKGAVTPVENQGECGSCWAF 135

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           ST G +EG  F+ TG+LVSLS+QQLVDCD   +         GCNGG  +S++   +  G
Sbjct: 136 STAGNVEGQWFIKTGQLVSLSKQQLVDCDMAAE---------GCNGGWPSSSYLEIMDMG 186

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  E DYPY G ++   C  +K K+ A + +  V+   E++    L ++GPL+  +NAV
Sbjct: 187 GLESENDYPYVGVEQ--TCALNKEKLVAKIDDAVVLGASENEHVDYLAEHGPLSTLLNAV 244

Query: 292 YMQTYIGGV------SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
            +Q Y  G+       CP      L+H VL VGY   G       + PYWIIKNSWG  W
Sbjct: 245 ALQHYQSGILHPSHKDCP---DDDLNHAVLTVGYDREG-------DMPYWIIKNSWGTDW 294

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE GY+++ RG  VCG++ M ++
Sbjct: 295 GEKGYFRLFRGDCVCGINRMATS 317


>gi|196014793|ref|XP_002117255.1| hypothetical protein TRIADDRAFT_61245 [Trichoplax adhaerens]
 gi|190580220|gb|EDV20305.1| hypothetical protein TRIADDRAFT_61245 [Trichoplax adhaerens]
          Length = 353

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 136/324 (41%), Positives = 189/324 (58%), Gaps = 30/324 (9%)

Query: 56  AEHHFSLFK------KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD-PSATHGITQF 108
           A HH  +FK      K++NK+Y + +E ++R+ +F  N+ RA   QK D  +  +G T+ 
Sbjct: 45  ATHHDPMFKNYLQFIKEYNKSYNNIQELNYRYQVFTKNMARAMLFQKHDNATGRYGFTKL 104

Query: 109 SDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSC 168
           SDLT  E +  Y  +++  +      +A I   N LP  FDWR KGAV  VKDQ  CG+C
Sbjct: 105 SDLTDQEVKSFY-AMKKWPQQLYPTKKANIPQLNSLPQSFDWRSKGAVTAVKDQKRCGAC 163

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           W+F+TTG +EG  +L  GKL SLSEQ+LVDCD           D GC GGL  +A+   +
Sbjct: 164 WAFATTGNIEGQWYLNKGKLYSLSEQELVDCD---------KIDEGCKGGLPLNAYHSIM 214

Query: 229 -KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
            + GGL  E+DYPY    +   CK +KS+    + +   VS +E  +AA LV +GP+A+ 
Sbjct: 215 NRLGGLETEKDYPYVA--KNGKCKLNKSEEVVYINSSVKVSTNETDLAAWLVAHGPVAIG 272

Query: 288 INAVYMQTYIGGVSCPYI--CS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           IN+V M  Y GG++ P    C+ + LDHGVL+VGYG         K  PYWIIKNSWG  
Sbjct: 273 INSVNMLHYKGGIAHPTNKDCNPKLLDHGVLIVGYGEE-------KSTPYWIIKNSWGTD 325

Query: 345 WGENGYYKICRGRNVCGVDSMVST 368
           WGE GYY++ RG   CG++   ++
Sbjct: 326 WGEKGYYRVVRGIGACGLNKSATS 349


>gi|339244639|ref|XP_003378245.1| cathepsin F [Trichinella spiralis]
 gi|316972864|gb|EFV56510.1| cathepsin F [Trichinella spiralis]
          Length = 366

 Score =  241 bits (615), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 140/354 (39%), Positives = 202/354 (57%), Gaps = 24/354 (6%)

Query: 24  LIDDVDQLIRQVTDGGDE--ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRF 81
           L  +V+ L R +    D+  +L      N     +  +F  F  +FNK Y +++    ++
Sbjct: 28  LFTNVNHLERYMDSKFDKNLLLKLLPEMNAKEARSWENFKQFMVEFNKWYETEKLTAEKY 87

Query: 82  TIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPIL 139
            IFK+N+  A R Q+ +  +A +G T F+D+TP EFR+T+L      ++ PK   +   +
Sbjct: 88  NIFKSNMVIAKRLQEEEQGTAIYGPTIFADMTPEEFRKTHLNFNPNNVKKPK---RMANI 144

Query: 140 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 199
           P +++    DWR+  AV  VKDQG+CGSCW+F T   +EGA  + T +L+SLSEQQLVDC
Sbjct: 145 PKSNISERMDWRKFNAVTSVKDQGNCGSCWAFCTVANIEGAWAVKTAQLISLSEQQLVDC 204

Query: 200 DHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAA 259
           D           D GC GGL  +A+   ++ GGL +EEDY YT   R   CKF+ +K A 
Sbjct: 205 DR---------LDDGCEGGLPVNAYLEIIRLGGLEKEEDYKYTA--RSGKCKFNHTKSAV 253

Query: 260 SVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP--YICSRR-LDHGVLL 316
            + +  V+  DED IA  + +NGP+AV +NA  M  Y  G++ P   +CS   ++HGV +
Sbjct: 254 YINDTVVLPEDEDAIARYVSENGPVAVGLNADAMMFYRSGIAHPSRLMCSPDGINHGVTI 313

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVA 370
           VGY             PYWIIKNSWG +WGE GYY + RG+ VCG+D M S+V 
Sbjct: 314 VGYDVKESL---FWSTPYWIIKNSWGPNWGEKGYYYLYRGKGVCGIDQMASSVV 364


>gi|343417244|emb|CCD20093.1| cysteine peptidase precursor [Trypanosoma vivax Y486]
          Length = 454

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 136/318 (42%), Positives = 179/318 (56%), Gaps = 25/318 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FK+K+ ++Y +  E   R  +F+ N+RR+  +   +P AT G+T FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 117 RRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R  Y    R     +   +  + +P    PA  DW  KGAV PVKDQG+CGSCWSFS  G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWGRKGAVTPVKDQGTCGSCWSFSAIG 150

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG    A   L SLSEQ LV CD +         D+GC GGLM++AFE+ +K  +G +
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCDTK---------DNGCGGGLMDNAFEWIVKENSGKV 201

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      CK    K+ A++     +  DED IA  L  NGP+AVA++A  
Sbjct: 202 YTEKSYPYVSGGGEEPPCKPRGHKVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             +Y GGV  SC    S  L+HGVLLVGY  +        + PYWIIKNSW  SWGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 351 YKICRGRNVCGVDSMVST 368
            +I +G N C V    S+
Sbjct: 312 IRIEKGTNQCLVAQRASS 329


>gi|340053966|emb|CCC48259.1| cysteine peptidase precursor, fragment, partial [Trypanosoma vivax
           Y486]
          Length = 447

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 178/318 (55%), Gaps = 25/318 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FK+K+ ++Y +  E   R  +F+ N+RR+  +   +P AT G+T FSDLTP EF
Sbjct: 23  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 82

Query: 117 RRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R  Y    R     +   +  + +P    PA  DWR KGAV PVKDQGSCGSCWSFS  G
Sbjct: 83  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGSCGSCWSFSAIG 142

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG    A   L SLSEQ LV CD +         D+GC GG M++AFE+ +K  +G +
Sbjct: 143 NIEGQWAAAGNPLTSLSEQMLVSCDFK---------DNGCGGGFMDNAFEWIVKENSGKV 193

Query: 234 MREEDYPYTGTDRGHA-CKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY   D     C     ++ A++     +  DED IA  L  NGP+AVA++A  
Sbjct: 194 YTEKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 253

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             +Y GGV  SC    S  L+HGVLLVGY  +        + PYWIIKNSW  SWGE GY
Sbjct: 254 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 303

Query: 351 YKICRGRNVCGVDSMVST 368
            +I +G N C V  + S+
Sbjct: 304 IRIEKGTNQCLVAQLASS 321


>gi|10391|emb|CAA38238.1| unnamed protein product [Trypanosoma brucei]
          Length = 450

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 137/318 (43%), Positives = 178/318 (55%), Gaps = 25/318 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EF
Sbjct: 38  EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R  Y  G        K   +   + T   PA  DWREKGAV PVKDQG CGSCW+FST G
Sbjct: 98  RARYRNGASYFAAAQKRVRKTVNVTTGRAPAAVDWREKGAVTPVKDQGQCGSCWAFSTIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A   LVSLSEQ LV CD         + D GC GGLM++AF + + +  G +
Sbjct: 158 NIEGQWQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNSNGGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A++A  
Sbjct: 209 FTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATS 268

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
              Y GG+  SC    S +LDHGVLLVGY             PYWIIKNSW   WGE+GY
Sbjct: 269 FMDYNGGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGY 318

Query: 351 YKICRGRNVCGVDSMVST 368
            +I +G N C ++  VS+
Sbjct: 319 IRIEKGTNQCLMNQAVSS 336


>gi|56718883|gb|AAW28152.1| westerpain-10 [Paragonimus westermani]
          Length = 327

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 137/323 (42%), Positives = 183/323 (56%), Gaps = 38/323 (11%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+ + K YA++++   RF IFK NL RA + Q  D  +A +G+TQFSDLTP 
Sbjct: 28  ARELYEQFKRGYGKVYANEDDQ-KRFAIFKDNLVRAQKLQLKDQGTARYGVTQFSDLTPE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSF 171
           EF   YL        P + DQ   +    L   P   DWR KGAV  V++QGSCGSCW+F
Sbjct: 87  EFAAKYLSA------PVNDDQVKRMRPTGLKAAPERIDWRAKGAVTAVENQGSCGSCWAF 140

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           ST G +EG  F+ TG+LVSLS+QQLVDCD             GCNGG   S++   +  G
Sbjct: 141 STAGNVEGQWFIKTGQLVSLSKQQLVDCDRAA---------QGCNGGWPASSYLEIMYMG 191

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  E DYPY G ++   C  +K K+ A + +  V+  +E+  AA L ++GPL+  +NAV
Sbjct: 192 GLESESDYPYVGVEQ--TCALNKEKLVAKIDDSIVLGPEEEDHAAYLAEHGPLSTLLNAV 249

Query: 292 YMQTYIGGV------SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
            +Q Y  GV       CP      L+H VL VGY   G       + PYWIIKNSWG  W
Sbjct: 250 ALQHYQSGVLKPTFDECP---DTELNHAVLTVGYDKEG-------DMPYWIIKNSWGTDW 299

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE GY+++ RG   CG++ M ++
Sbjct: 300 GEKGYFRLFRGDCTCGINRMATS 322


>gi|261328617|emb|CBH11595.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
 gi|261328620|emb|CBH11598.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
          Length = 450

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 182/323 (56%), Gaps = 35/323 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EF
Sbjct: 38  EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEF 97

Query: 117 RR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           R       +Y    +K RL K  +    + T   PA  DWREKGAV PVKDQG CGSCW+
Sbjct: 98  RARYRNGASYFAAAQK-RLRKTVN----VTTGRAPAAVDWREKGAVTPVKDQGQCGSCWA 152

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST G +EG   +A   LVSLSEQ LV CD         + D GC GGLM++AF + + +
Sbjct: 153 FSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNS 203

Query: 231 --GGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
             G +  E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A
Sbjct: 204 NGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIA 263

Query: 288 INAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           ++A     Y GG+  SC    S +LDHGVLLVGY             PYWIIKNSW   W
Sbjct: 264 VDATSFMDYNGGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMW 313

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE+GY +I +G N C ++  VS+
Sbjct: 314 GEDGYIRIEKGTNQCLMNQAVSS 336


>gi|261328615|emb|CBH11593.1| cysteine peptidase precursor [Trypanosoma brucei gambiense DAL972]
          Length = 451

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 182/323 (56%), Gaps = 35/323 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EF
Sbjct: 38  EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEF 97

Query: 117 RR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           R       +Y    +K RL K  +    + T   PA  DWREKGAV PVKDQG CGSCW+
Sbjct: 98  RARYRNGASYFAAAQK-RLRKTVN----VTTGRAPAAVDWREKGAVTPVKDQGQCGSCWA 152

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST G +EG   +A   LVSLSEQ LV CD         + D GC GGLM++AF + + +
Sbjct: 153 FSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNS 203

Query: 231 --GGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
             G +  E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A
Sbjct: 204 NGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIA 263

Query: 288 INAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           ++A     Y GG+  SC    S +LDHGVLLVGY             PYWIIKNSW   W
Sbjct: 264 VDATSFMDYNGGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMW 313

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE+GY +I +G N C ++  VS+
Sbjct: 314 GEDGYIRIEKGTNQCLMNQAVSS 336


>gi|72389859|ref|XP_845224.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
 gi|62359932|gb|AAX80357.1| cysteine peptidase precursor [Trypanosoma brucei]
 gi|70801759|gb|AAZ11665.1| cysteine peptidase precursor [Trypanosoma brucei brucei strain
           927/4 GUTat10.1]
          Length = 450

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 182/323 (56%), Gaps = 35/323 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FKKK+ K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EF
Sbjct: 38  EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEF 97

Query: 117 RR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           R       +Y    +K RL K  +    + T   PA  DWREKGAV PVKDQG CGSCW+
Sbjct: 98  RARYRNGASYFAAAQK-RLRKTVN----VTTGRAPAAVDWREKGAVTPVKDQGQCGSCWA 152

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST G +EG   +A   LVSLSEQ LV CD         + D GC GGLM++AF + + +
Sbjct: 153 FSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNS 203

Query: 231 --GGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
             G +  E  YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A
Sbjct: 204 NGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIA 263

Query: 288 INAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           ++A     Y GG+  SC    S +LDHGVLLVGY             PYWIIKNSW   W
Sbjct: 264 VDATSFMDYNGGILTSC---TSEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMW 313

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE+GY +I +G N C ++  VS+
Sbjct: 314 GEDGYIRIEKGTNQCLMNQAVSS 336


>gi|74273320|gb|ABA01328.1| secreted cathepsin F [Teladorsagia circumcincta]
          Length = 364

 Score =  240 bits (612), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 138/346 (39%), Positives = 189/346 (54%), Gaps = 28/346 (8%)

Query: 31  LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRR 90
           LI + T G  E     +  +    GA +HF+ F ++ +K Y ++ E   RF IFK NL  
Sbjct: 35  LIDKKTKGSIEFARLGQHISPKDFGAWNHFTSFIERHDKVYRNESEALKRFGIFKRNLEI 94

Query: 91  AARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL------PTND 143
               Q+ D  +A +GI QF+DL+P EF++T+L      + P   ++   L      P   
Sbjct: 95  IRSAQENDKGTAIYGINQFADLSPEEFKKTHLP--HTWKQPDHPNRIVDLAAEGVDPKEP 152

Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
           LP  FDWRE GAV  VK +G C +CW+FS TG +EG  FLA  KLVSLS QQL+DCD   
Sbjct: 153 LPESFDWREHGAVTKVKTEGHCAACWAFSVTGNIEGQWFLAKKKLVSLSAQQLLDCD--- 209

Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN 263
                   D GCNGG    A++  ++ GGL  E+ YPY    +   C+   S IA  +  
Sbjct: 210 ------VVDEGCNGGFPLDAYKEIVRMGGLEPEDKYPYEA--KAEQCRLVPSDIAVYING 261

Query: 264 FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICS-RRLDHGVLLVGYGSA 322
              +  DE+++ A LVK GP+++ I    +Q Y GGVS P  C    + HG LLVGYG  
Sbjct: 262 SVELPHDEEKMRAWLVKKGPISIGITVDDIQFYKGGVSRPTTCRLSSMIHGALLVGYGVE 321

Query: 323 GYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
                  K  PYWIIKNSWG +WGE+GYY++ RG N C ++   ++
Sbjct: 322 -------KNIPYWIIKNSWGPNWGEDGYYRMVRGENACRINRFPTS 360


>gi|67773380|gb|AAY81947.1| cysteine protease 9 [Paragonimus westermani]
          Length = 322

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 184/323 (56%), Gaps = 38/323 (11%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+ + K YA++++   RF IFK NL RA + Q  D  +A +G+TQFSDLTP 
Sbjct: 23  ARELYEQFKRDYGKVYANEDDQ-KRFAIFKDNLVRAQKLQLKDQGTARYGVTQFSDLTPE 81

Query: 115 EFRRTYLGLRRKLRLPKDADQAP-ILPT--NDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           EF   YL      R   + DQ   + PT     P   DWREKGAV  V++QGSCGSCW+F
Sbjct: 82  EFAAKYL------RAAVNNDQVERVRPTGLKAAPERMDWREKGAVTAVENQGSCGSCWAF 135

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G +EG  F+ TG+LVSLS+QQLVDCD   +         GCNGG   S++      G
Sbjct: 136 SAAGNVEGQWFIKTGQLVSLSKQQLVDCDRVAE---------GCNGGWPVSSYLEIKHMG 186

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  E DYPY G ++   C  +K K+ A + +  V+   E++ AA L ++GPL+  +NAV
Sbjct: 187 GLESESDYPYVGAEQ--TCALNKEKLLAKIDDLIVLGAYEEEHAAYLAEHGPLSTLLNAV 244

Query: 292 YMQTYIGGV------SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
            +Q Y  GV       CP      L+H VL VGY   G       + PYWIIKNSWG  W
Sbjct: 245 ALQHYQSGVLNPTYEECP---DTELNHAVLTVGYDKEG-------DMPYWIIKNSWGTDW 294

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           GE GY+++ RG   CG++ M ++
Sbjct: 295 GEKGYFRLFRGDYTCGINRMATS 317


>gi|182892046|gb|AAI65744.1| Ctsf protein [Danio rerio]
          Length = 473

 Score =  239 bits (611), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/313 (43%), Positives = 179/313 (57%), Gaps = 22/313 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y+SQEE + R  IF+ N++ A   Q L+  SA +GIT+FSDLT  EFR 
Sbjct: 175 FKNFMITYNRTYSSQEEAEKRLRIFQQNMKTAQTLQSLEQGSAEYGITKFSDLTEDEFRM 234

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            YL         K   +  I  +   P  +DWR+ GAV PVK+QG CGSCW+FS TG +E
Sbjct: 235 MYLNPMLSQWSLKKEMKPAIPASAPAPDTWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIE 294

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G  F  TG+L+SLSEQ+LVDCD           D  C GGL ++A+E     GGL  E D
Sbjct: 295 GQWFKKTGQLLSLSEQELVDCD---------KLDQACGGGLPSNAYEAIENLGGLETETD 345

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           Y YTG     +C F   K+AA + +   +  DE +IAA L +NGP++ A+NA  MQ Y  
Sbjct: 346 YSYTG--HKQSCDFSTGKVAAYINSSVELPKDEKEIAAFLAENGPVSAALNAFAMQFYRK 403

Query: 299 GVSCP---YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GVS P   +     +DH VLLVG+G            P+W IKNSWGE +GE GYY + R
Sbjct: 404 GVSHPLKIFCNPWMIDHAVLLVGFGQRNGV-------PFWAIKNSWGEDYGEQGYYYLYR 456

Query: 356 GRNVCGVDSMVST 368
           G  +CG+  M S+
Sbjct: 457 GSGLCGIHKMCSS 469


>gi|117606135|ref|NP_001071036.1| cathepsin F precursor [Danio rerio]
 gi|115313533|gb|AAI24244.1| Cathepsin F [Danio rerio]
          Length = 473

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/313 (43%), Positives = 179/313 (57%), Gaps = 22/313 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y+SQEE + R  IF+ N++ A   Q L+  SA +GIT+FSDLT  EFR 
Sbjct: 175 FKNFMITYNRTYSSQEEAEKRLRIFQQNMKTAQTLQSLEQGSAEYGITKFSDLTEDEFRM 234

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            YL         K   +  I  +   P  +DWR+ GAV PVK+QG CGSCW+FS TG +E
Sbjct: 235 MYLNPMLSQWSLKKEMKPAIPASAPAPDTWDWRDHGAVSPVKNQGMCGSCWAFSVTGNIE 294

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G  F  TG+L+SLSEQ+LVDCD           D  C GGL ++A+E     GGL  E D
Sbjct: 295 GQWFKKTGQLLSLSEQELVDCD---------KLDQACGGGLPSNAYEAIENLGGLETETD 345

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           Y YTG     +C F   K+AA + +   +  DE +IAA L +NGP++ A+NA  MQ Y  
Sbjct: 346 YSYTG--HKQSCDFSTGKVAAYINSSVELPKDEKEIAAFLAENGPVSAALNAFAMQFYRK 403

Query: 299 GVSCP---YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GVS P   +     +DH VLLVG+G            P+W IKNSWGE +GE GYY + R
Sbjct: 404 GVSHPLKIFCNPWMIDHAVLLVGFGQRNGV-------PFWAIKNSWGEDYGEQGYYYLYR 456

Query: 356 GRNVCGVDSMVST 368
           G  +CG+  M S+
Sbjct: 457 GSGLCGIHKMCSS 469


>gi|375073982|gb|AFA34858.1| cathepsin L-like protein [Trypanosoma dionisii]
          Length = 467

 Score =  239 bits (610), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/323 (43%), Positives = 181/323 (56%), Gaps = 37/323 (11%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR- 117
            F+ FK+++ + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFADFKQRYGRVYKSAAEEAFRLSVFRKNLLDAKLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 118 RTYLGL------RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           R + G       R++ R+P D      +   D PA  DWR++GAV PVKDQG CGSCW+F
Sbjct: 97  RHHSGAAHFAAGRKRARVPVD------VGVGDAPAAVDWRDRGAVTPVKDQGQCGSCWAF 150

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK-- 229
           S  G +EG  FLA   L SLSEQ LV CD         + DSGC+GGLMNSAFE+ ++  
Sbjct: 151 SAIGNVEGQWFLAGNALTSLSEQMLVSCD---------TMDSGCDGGLMNSAFEWIVEHH 201

Query: 230 AGGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 288
            G +  EE Y Y +G      C+     + A +     +  DE ++A  L  NGPLAVA+
Sbjct: 202 NGTVYTEESYRYASGDGIAQPCRTSGRTVGAVITGHVKLPPDEAKMATWLAANGPLAVAV 261

Query: 289 NAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           +A     Y GGV  SC    S  LDHGVLLVGY  +  AP      PYWI+KNSWG  WG
Sbjct: 262 DASSWMFYTGGVLTSC---VSNELDHGVLLVGYNDSA-AP------PYWIVKNSWGTLWG 311

Query: 347 ENGYYKICRGRNVCGVDSMVSTV 369
           E+GY +I +G N C V    S+ 
Sbjct: 312 EDGYVRIAKGTNQCLVKEEASSA 334


>gi|390339264|ref|XP_791714.3| PREDICTED: putative cysteine proteinase CG12163-like
           [Strongylocentrotus purpuratus]
          Length = 453

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 184/312 (58%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQE---EHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAE 115
           F  F   F + Y   +   E+++R+++F  N+       + +  +A +G T+F+D+T AE
Sbjct: 156 FDKFLMTFKREYRQNDGTNEYEYRYSVFVQNMLTVEMFNQFEQGTAKYGPTKFADMTEAE 215

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           FR+   G  +K  + K A     +P   +P ++DWR  GAV PVK+QG CGSCW+FS  G
Sbjct: 216 FRKLQSGPLKKTGIKKQA----AIPQGPVPEEYDWRTHGAVTPVKNQGMCGSCWAFSAIG 271

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
            +EG   +  G+L+SLSEQ+LVDCD           D GC GG M+ A+E  +K GG M 
Sbjct: 272 NMEGQWQIKKGELISLSEQELVDCD---------KVDGGCEGGEMSDAYEAIIKLGGAMS 322

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           EE YPY G +    CKF+ + +   +  +  +S +E ++A  L  +GP+++ INA+ MQ 
Sbjct: 323 EEKYPYRGEN--EKCKFNMTDVRVKINGYVNISKNETEMAGWLAAHGPISIGINALMMQF 380

Query: 296 YIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKE-KPYWIIKNSWGESWGENGYY 351
           Y GG++ P+   CS   LDHGVL+VGY         +K+ +PYWI+KNSWG+ WGE GYY
Sbjct: 381 YFGGIAHPWKIFCSPDSLDHGVLIVGYS--------VKDGEPYWIVKNSWGKDWGEEGYY 432

Query: 352 KICRGRNVCGVD 363
            + RG   CG++
Sbjct: 433 LVYRGDGTCGLN 444


>gi|312080834|ref|XP_003142769.1| ctsf protein [Loa loa]
          Length = 437

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/354 (38%), Positives = 197/354 (55%), Gaps = 34/354 (9%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D+ D +  +VTD   ++ +  E    ++L   + F  F KKF + Y+S  E   RF  + 
Sbjct: 103 DESDTVNMKVTDPVIDLQNWQEGKKTEMLW--NSFLDFIKKFKREYSSVAEQLDRFKKYM 160

Query: 86  ANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI----LP 140
            NL    + Q  +  +A +G+TQFSD++P EF++T L      R+  +  +  +    L 
Sbjct: 161 QNLHFVEKLQHEEKGTAIYGVTQFSDMSPEEFQKTMLPSLWWDRVVSNGVEYDLKKFNLT 220

Query: 141 TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD 200
            N+LP  FDWR KG V PVK+QGSCGSCW+FS TG +EG   + TGKL+SLSEQ+L+DCD
Sbjct: 221 FNNLPEQFDWRTKGVVTPVKNQGSCGSCWAFSVTGNIEGLWAIKTGKLISLSEQELIDCD 280

Query: 201 HECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAAS 260
                      D GCNGGL  +AF    + GGL  E+ YPY    R   C   +S IA +
Sbjct: 281 R---------IDKGCNGGLPINAFREIQRMGGLEPEDQYPYKA--RNGTCHLIRSAIAVT 329

Query: 261 VANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV------SCPYICSRRLDHGV 314
           + +   +  +E  + A +V+ GPL+V I+A  +  Y  G+       CP      +DHGV
Sbjct: 330 IDDAVEIPRNETVMKAWIVQRGPLSVGIDAKLLAYYKSGILHPSRSRCP---PSGIDHGV 386

Query: 315 LLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           L+ GYG            PYW IKNSWG+ WGE+GY+++  G++VCGV  +VS+
Sbjct: 387 LITGYGVENGL-------PYWTIKNSWGDQWGEDGYFRLMLGKDVCGVSDLVSS 433


>gi|393906608|gb|EFO21301.2| ctsf protein [Loa loa]
          Length = 472

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/354 (38%), Positives = 197/354 (55%), Gaps = 34/354 (9%)

Query: 26  DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFK 85
           D+ D +  +VTD   ++ +  E    ++L   + F  F KKF + Y+S  E   RF  + 
Sbjct: 138 DESDTVNMKVTDPVIDLQNWQEGKKTEMLW--NSFLDFIKKFKREYSSVAEQLDRFKKYM 195

Query: 86  ANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI----LP 140
            NL    + Q  +  +A +G+TQFSD++P EF++T L      R+  +  +  +    L 
Sbjct: 196 QNLHFVEKLQHEEKGTAIYGVTQFSDMSPEEFQKTMLPSLWWDRVVSNGVEYDLKKFNLT 255

Query: 141 TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD 200
            N+LP  FDWR KG V PVK+QGSCGSCW+FS TG +EG   + TGKL+SLSEQ+L+DCD
Sbjct: 256 FNNLPEQFDWRTKGVVTPVKNQGSCGSCWAFSVTGNIEGLWAIKTGKLISLSEQELIDCD 315

Query: 201 HECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAAS 260
                      D GCNGGL  +AF    + GGL  E+ YPY    R   C   +S IA +
Sbjct: 316 R---------IDKGCNGGLPINAFREIQRMGGLEPEDQYPYKA--RNGTCHLIRSAIAVT 364

Query: 261 VANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV------SCPYICSRRLDHGV 314
           + +   +  +E  + A +V+ GPL+V I+A  +  Y  G+       CP      +DHGV
Sbjct: 365 IDDAVEIPRNETVMKAWIVQRGPLSVGIDAKLLAYYKSGILHPSRSRCP---PSGIDHGV 421

Query: 315 LLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           L+ GYG            PYW IKNSWG+ WGE+GY+++  G++VCGV  +VS+
Sbjct: 422 LITGYGVENGL-------PYWTIKNSWGDQWGEDGYFRLMLGKDVCGVSDLVSS 468


>gi|395544492|ref|XP_003774144.1| PREDICTED: cathepsin F [Sarcophilus harrisii]
          Length = 451

 Score =  239 bits (609), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 141/320 (44%), Positives = 184/320 (57%), Gaps = 35/320 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +NK+YA+  E   R  IF  NL  A + Q+LD  SA +G+T+FSDLT  EFR 
Sbjct: 154 FKDFLTTYNKSYANATETQRRLGIFARNLELARKVQELDRGSAEYGVTKFSDLTEEEFRT 213

Query: 119 TYLGLR------RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           +YL         R LR P  A + P       PA +DWR+ GAV  VK+QG+CGSCW+FS
Sbjct: 214 SYLNPLLSSLPGRALR-PGPATRGPA------PASWDWRDHGAVTGVKNQGACGSCWAFS 266

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG +EG  FL  G L++LSEQ+LVDCD         + D  C GGL ++A+    K GG
Sbjct: 267 VTGNVEGQWFLRRGALLALSEQELVDCD---------TLDQACGGGLPSNAYTAIEKLGG 317

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  E+DY Y G  R   C F   K    + +   +S DE+++A  L +NGP+++A+NA  
Sbjct: 318 LETEKDYSYEG--RKERCSFSPDKARVYINSSVDLSRDEEELATWLAENGPVSIALNAFA 375

Query: 293 MQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           MQ Y  GVS P+  +CS   +DH VLLVGYG            P+W IKNSWG  WGE G
Sbjct: 376 MQFYRRGVSHPFRPLCSPWFIDHAVLLVGYG-------HRSGIPFWAIKNSWGPDWGEEG 428

Query: 350 YYKICRGRNVCGVDSMVSTV 369
           YY + RG   CGV++M S+ 
Sbjct: 429 YYYLYRGARACGVNAMASSA 448


>gi|431910221|gb|ELK13294.1| Cathepsin F [Pteropus alecto]
          Length = 458

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/316 (43%), Positives = 184/316 (58%), Gaps = 29/316 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y ++EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 161 FKEFVITYNRTYETKEEAQWRMSVFINNMMRAQKIQALDRGTARYGVTKFSDLTEEEFRT 220

Query: 119 TYLG-LRRKLRLPKDADQAPILPTNDLPA--DFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
            YL  L ++LR    + + P+  +   PA  ++DWR KGAV  VKDQG CGSCW+FS TG
Sbjct: 221 IYLNPLLKELR----SKRMPLAMSVSGPAPPEWDWRNKGAVTKVKDQGMCGSCWAFSVTG 276

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
            +EG  FL  G L+SLSEQ+LVDCD           D  C GGL ++A+      GGL  
Sbjct: 277 NVEGQWFLKRGDLLSLSEQELVDCDK---------LDKACLGGLPSNAYSAIKTLGGLET 327

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           E+DY Y G      C F   K    + +   +S +E ++AA L KNGP+++AINA  MQ 
Sbjct: 328 EDDYGYNG--HLQTCNFSAEKAKVYINDSVELSQNEQKLAAWLAKNGPISIAINAFGMQF 385

Query: 296 YIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Y  G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY 
Sbjct: 386 YRHGISHPLRPLCSPWLIDHAVLLVGYGNRS-------DIPFWAIKNSWGTDWGEEGYYY 438

Query: 353 ICRGRNVCGVDSMVST 368
           + RG   CGV+ M S+
Sbjct: 439 LHRGSGACGVNIMASS 454


>gi|23397070|gb|AAN31820.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
          Length = 358

 Score =  238 bits (607), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 149/377 (39%), Positives = 201/377 (53%), Gaps = 34/377 (9%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH- 59
           M +KT++  +V +V+F+A ++  +  D    IR V+DG  E+    E + + +LG   H 
Sbjct: 1   MSAKTILSSVVLVVLFAASAAANIGFDESNPIRMVSDGLREV----EESVSQILGQSRHV 56

Query: 60  --FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
             F+ F  ++ K Y + EE   RF+IFK NL       K   S   G+ QF+DLT  EF+
Sbjct: 57  LSFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ 116

Query: 118 RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           RT LG  +             +    LP   DWRE G V PVKDQG CGSCW+FSTTGAL
Sbjct: 117 RTKLGAAQNCSATLKGSHK--VTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGAL 174

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           E A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  E+
Sbjct: 175 EAAYHQAFGKGISLSEQQLVDCAGAFN-------NYGCNGGLPSQAFEYIKSNGGLDTEK 227

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSL---DEDQIAANLVKNGPLAVAINAVY-M 293
            YPYTG D    CKF    +   V N   ++L   DE + A  LV+  P+++A   ++  
Sbjct: 228 AYPYTGKDE--TCKFSAENVGVQVLNSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSF 283

Query: 294 QTYIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           + Y  GV     C      ++H VL VGYG            PYW+IKNSWG  WG+ GY
Sbjct: 284 RLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVEDGV-------PYWLIKNSWGADWGDKGY 336

Query: 351 YKICRGRNVCGVDSMVS 367
           +K+  G+N+CG+ +  S
Sbjct: 337 FKMEMGKNMCGIATCAS 353


>gi|343477445|emb|CCD11724.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
          Length = 380

 Score =  237 bits (605), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/316 (41%), Positives = 178/316 (56%), Gaps = 21/316 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG CGSCW+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD           D GC GGLM+ AF++ + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCDTN---------DFGCEGGLMDDAFKWIVSSNKGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G     AC      + A + +   +  DE+ IA  L KNGP+A+A++A  
Sbjct: 209 FTEQSYPYASGGGNVPACDKSGKVVGAKIRDHVDLPEDENAIAEWLAKNGPVAIAVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q+Y GGV    I S  LDHGVLLVGY           + PYWIIKNSW + WGE GY +
Sbjct: 269 FQSYTGGVLTSCI-SEHLDHGVLLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYIR 320

Query: 353 ICRGRNVCGVDSMVST 368
           I +G N C + ++ S+
Sbjct: 321 IEKGTNQCLMKNLPSS 336


>gi|340053971|emb|CCC48265.1| cysteine peptidase precursor, fragment, partial [Trypanosoma vivax
           Y486]
          Length = 389

 Score =  237 bits (604), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 133/318 (41%), Positives = 177/318 (55%), Gaps = 25/318 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FK+K+ ++Y +  E   R  +F+ N+RR+  +   +P AT G+T FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 117 RRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R  Y    R     +   +  + +P    PA  DWR KGAV PVKDQG+CGSCWSFS  G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGTCGSCWSFSAIG 150

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG    A   L SLSEQ LV CD +         D+GC GG M++AFE+ +K  +G +
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCDFK---------DNGCGGGFMDNAFEWIVKENSGKV 201

Query: 234 MREEDYPYTGTDRGHA-CKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
              + YPY   D     C     ++ A++     +  DED IA  L  NGP+AVA++A  
Sbjct: 202 YTGKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             +Y GGV  SC    S  L+HGVLLVGY  +        + PYWIIKNSW  SWGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 351 YKICRGRNVCGVDSMVST 368
            +I +G N C V  + S+
Sbjct: 312 IRIEKGTNQCLVAQLASS 329


>gi|340053968|emb|CCC48262.1| cysteine peptidase, Clan CA, family C1,Cathepsin L-like, fragment,
           partial [Trypanosoma vivax Y486]
          Length = 323

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/312 (42%), Positives = 174/312 (55%), Gaps = 25/312 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F+ FK+K+ ++Y +  E   R  +F+ N+RR+  +   +P AT G+T FSDLTP EF
Sbjct: 31  EPLFAAFKQKYGRSYGTAAEEAFRLRVFEDNMRRSRMYAAANPHATFGVTPFSDLTPEEF 90

Query: 117 RRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R  Y    R     +   +  + +P    PA  DWR KGAV PVKDQG CGSCWSFS  G
Sbjct: 91  RTRYHNGERHFEAARGRVRTLVQVPPGKAPAAVDWRRKGAVTPVKDQGRCGSCWSFSAIG 150

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG    A   L SLSEQ LV CD +         D+GC GG M++AFE+ +K  +G +
Sbjct: 151 NIEGQWAAAGNPLTSLSEQMLVSCDFK---------DNGCGGGFMDNAFEWIVKENSGKV 201

Query: 234 MREEDYPYTGTDRGHA-CKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY   D     C     ++ A++     +  DED IA  L  NGP+AVA++A  
Sbjct: 202 YTEKSYPYVSEDGSKPFCIPYGHEVGATITGHVDIPHDEDAIAKYLADNGPVAVAVDATT 261

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             +Y GGV  SC    S  L+HGVLLVGY  +        + PYWIIKNSW  SWGE GY
Sbjct: 262 FMSYSGGVVTSC---TSEALNHGVLLVGYNDS-------SKPPYWIIKNSWSSSWGEKGY 311

Query: 351 YKICRGRNVCGV 362
            +I +G N C V
Sbjct: 312 IRIEKGTNQCLV 323


>gi|343476707|emb|CCD12272.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/317 (40%), Positives = 179/317 (56%), Gaps = 23/317 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG CGSCW+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVTVSTGKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG--GL 233
            +EG   +    L SLSEQ LV CD E         D GC GGLM++AF++ + +    +
Sbjct: 158 NIEGQWKVTGHNLTSLSEQMLVSCDTE---------DLGCAGGLMDNAFKWIVSSNRHNV 208

Query: 234 MREEDYPYTGTDRGHA--CKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             EE YPY  +  G+   C+     + A + +   +  DE+ IA  L KNGP+A+A+++ 
Sbjct: 209 FTEESYPY-ASKGGNVPPCRMSGKVVGAKIRDHVDLPKDENAIAEWLAKNGPVAIAVDST 267

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
             Q+Y GGV    I S++LDHGVLLVGY           + PYWIIKNSW + WGE GY 
Sbjct: 268 SFQSYTGGVLTSCI-SKQLDHGVLLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYI 319

Query: 352 KICRGRNVCGVDSMVST 368
           +I +G N C V +  ++
Sbjct: 320 RIEKGTNQCLVKNYATS 336


>gi|339246873|ref|XP_003375070.1| viral cathepsin [Trichinella spiralis]
 gi|316971622|gb|EFV55373.1| viral cathepsin [Trichinella spiralis]
          Length = 496

 Score =  236 bits (602), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/366 (38%), Positives = 207/366 (56%), Gaps = 30/366 (8%)

Query: 15  VFSAVSSGTLI-------DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKF 67
           V + + +GTLI       D+ D+ +  +     ++L    S + +       F  F K F
Sbjct: 145 VLNELKNGTLITITNTSEDNFDRKL-MLAYNSVKLLKFIRSQSEEERTLWMQFKEFLKTF 203

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRK 126
            K Y S++E   R+ IFK N++     QK +  +A +G+T F+DLTP EFR+ YL  + K
Sbjct: 204 KKWYLSEKELLKRYDIFKVNMKTVEMLQKNEQGTAVYGVTFFADLTPEEFRKFYLSPQWK 263

Query: 127 L-RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
             +LP+   +   +P   +   +DWRE  AV  VK+QG CGSCW+F+T   +EG   +  
Sbjct: 264 RDQLPQ---RKASIPKGKIEDRWDWREHNAVTEVKNQGMCGSCWAFATIANVEGVWAVKK 320

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           G+LVSLSEQ+LVDCD         + D GC+GG  ++A++  ++ GGL  E +Y Y G +
Sbjct: 321 GELVSLSEQELVDCD---------TLDQGCSGGYPSNAYKEIIRLGGLTTETNYSYDG-N 370

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP-- 303
           +G  C+F        + +   +  DE +IAA + +NGP+AV INA  M  Y  G++ P  
Sbjct: 371 QG-TCRFKTQNAKVYINDSVSLPEDETEIAAYIRENGPVAVGINAFAMMFYRHGIAHPWR 429

Query: 304 YICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGV 362
           ++CS   LDHGV +VGY     +    K KPYWIIKNSWG  WGE GYY + RG  VCGV
Sbjct: 430 FLCSPDALDHGVAIVGYDVEKQSK---KPKPYWIIKNSWGTHWGEGGYYMLYRGAGVCGV 486

Query: 363 DSMVST 368
           + MV++
Sbjct: 487 NKMVTS 492


>gi|18141283|gb|AAL60579.1|AF454957_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 460

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 143/363 (39%), Positives = 197/363 (54%), Gaps = 38/363 (10%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAE--H 58
           MGS  V + L+++++  + ++   I   D+              HH +  N+   AE   
Sbjct: 1   MGSVKVTILLLAMMIGVSYAADMSIISYDE-------------KHHITAENERSDAEVAR 47

Query: 59  HFSLFKKKFNKAYASQ----EEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPA 114
            +  + +K  K   S     EE D RF IFK NLR    H   + S   G+T+F+DLT  
Sbjct: 48  IYEAWMEKHGKKAQSNGLVGEEKDQRFEIFKDNLRFIDEHNNKNLSYKLGLTRFADLTNE 107

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           E+R  YLG + K R+ K +D+      + +P   DWR++GAV  VKDQGSCGSCW+FST 
Sbjct: 108 EYRSIYLGAKSKKRVLKTSDRYQPRVGDAIPDSVDWRKEGAVAAVKDQGSCGSCWAFSTI 167

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GA+EG N + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+ 
Sbjct: 168 GAVEGINKIVTGDLISLSEQELVDCDT--------SYNQGCNGGLMDYAFEFIIKNGGID 219

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VY 292
            EEDYPY   D G   +  K+    ++  +  V  + +      + N P++VAI A    
Sbjct: 220 TEEDYPYKAAD-GRCDQTRKNAKVVTIDAYEDVPENNEAALKKTLANQPISVAIEAGGRA 278

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q Y  GV    IC   LDHGV+ VGYG+          K YWI++NSWG SWGE+GY K
Sbjct: 279 FQLYSSGVF-DGICGTELDHGVVAVGYGTE-------NGKDYWIVRNSWGGSWGESGYIK 330

Query: 353 ICR 355
           + R
Sbjct: 331 MAR 333


>gi|343472324|emb|CCD15484.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  236 bits (601), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/318 (40%), Positives = 178/318 (55%), Gaps = 25/318 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG CGSCW+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVTVSTGKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV     CDP E       C GG M++AF + + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQTLVS----CDPTE-----YACEGGFMDNAFRWIISSNKGKV 208

Query: 234 MREEDYPYTGTDRG-HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY+   R   AC      + A+++++  +  DE+ IA  L KNGP++V ++A  
Sbjct: 209 FTEQSYPYSSGGRNVPACNMSGKVVGANISDYVDLPQDENAIAEWLAKNGPVSVIVDATS 268

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            Q+Y GGV  SC    S+ L+H VLLVGY           + PYWIIKNSW E WGE GY
Sbjct: 269 FQSYTGGVLTSC---LSKILNHAVLLVGYDDTS-------KPPYWIIKNSWSEKWGEKGY 318

Query: 351 YKICRGRNVCGVDSMVST 368
            +I +G N C V    S+
Sbjct: 319 IRIEKGTNQCLVQEYASS 336


>gi|440804656|gb|ELR25533.1| cysteine proteinase precursor, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 330

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 133/317 (41%), Positives = 181/317 (57%), Gaps = 19/317 (5%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTP 113
           + AE  F  F  ++ K+YAS EE   R  IF+ NL R       +  A +G+ +F+DLTP
Sbjct: 26  MTAEQQFRQFAAQYGKSYAS-EEFGERLRIFRDNLDRIDALNSANTGARYGVNKFADLTP 84

Query: 114 AEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
            EF+ TYL   R     K A  A +  T  LP+ FDWR+KGAV P KDQG CG  W+FS 
Sbjct: 85  KEFKATYLKGARSAGQKKAAATAKLDMTGPLPSQFDWRDKGAVTPTKDQGQCG--WAFSV 142

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           T A+E   FL+  KLVSL+ QQ+VDCD        G+ D GC+GG   +A+EY +KAGGL
Sbjct: 143 TEAIESQWFLSGRKLVSLAPQQIVDCDQ-------GNGDYGCDGGDPPTAYEYVIKAGGL 195

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL--DEDQIAANLVKNGPLAVAINAV 291
             EE YPYT  D    C F  S + A ++N++ ++   +E ++   L   GPL++ ++A 
Sbjct: 196 DTEESYPYTAED--GQCAFKPSAVGAKISNWTYITTTKNETEMQYGLASRGPLSICVDAS 253

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYG-SAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             Q YIGGV    +C   LDH V++ GY    G+  ++      W I+NSWGE WG  GY
Sbjct: 254 SWQYYIGGVITS-LCEDSLDHCVMITGYSVQEGWDFMKYD---VWNIRNSWGEDWGYGGY 309

Query: 351 YKICRGRNVCGVDSMVS 367
             + RG N+CGV   V+
Sbjct: 310 LYVQRGSNLCGVGDEVT 326


>gi|55979119|gb|AAV69023.1| cysteine protease [Opisthorchis viverrini]
 gi|224923980|gb|ACN68966.1| cathepsin F-like cysteine protease [Opisthorchis viverrini]
          Length = 326

 Score =  235 bits (600), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 177/321 (55%), Gaps = 28/321 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K Y S ++ + RF IFK NL RA R Q ++  +A +G+TQFSDLT  
Sbjct: 28  ARALYEEFKLKYKKTY-SNDDDELRFRIFKDNLERAKRLQAMEQGTAEYGVTQFSDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL    ++R  +        P  D+  D   FDWR+ GAVGPV DQG CGSCW+F
Sbjct: 87  EFKTRYL----RMRFDEPIVNEDPTPQEDVTMDNSNFDWRDHGAVGPVLDQGDCGSCWAF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G +EG  F  TG L+ LSEQQL+DCDH          D GC+GG     +    + G
Sbjct: 143 SVIGNVEGQWFRKTGDLLGLSEQQLIDCDHS---------DQGCDGGYPPQTYSAIEEMG 193

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPYTG D    C  D+SK  A V   + +   E   A +L + GPL+  +NAV
Sbjct: 194 GLELRSDYPYTGKD--GICYMDQSKFVAYVNGSTRLPWCEKTQAKSLKEIGPLSSGLNAV 251

Query: 292 YMQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            +Q Y  G+  P  C+   L+H VL VGYG            PYWI+KNSWG+ +GE GY
Sbjct: 252 LLQLYKRGIMRPRWCNPAELNHAVLTVGYGME-------HRMPYWIVKNSWGKRFGEKGY 304

Query: 351 YKICRGRNVCGVDSMVSTVAA 371
           ++I RG   CG++  V+T   
Sbjct: 305 FRIYRGDGTCGINRAVTTAVV 325


>gi|1136312|gb|AAB41118.1| cruzipain [Trypanosoma cruzi]
          Length = 383

 Score =  235 bits (600), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/316 (42%), Positives = 172/316 (54%), Gaps = 21/316 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ANL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYGSAAEEAFRLSVFRANLFLARLHAAANPHATFGVTAFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVNVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYW+IKNSW   WGE+GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSA-------AVPYWVIKNSWTTQWGEDGYIRIA 319

Query: 355 RGRNVCGVDSMVSTVA 370
           +G N C V    S+ A
Sbjct: 320 KGSNQCLVKEEASSAA 335


>gi|405971603|gb|EKC36430.1| Cathepsin L [Crassostrea gigas]
          Length = 360

 Score =  235 bits (599), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/322 (44%), Positives = 185/322 (57%), Gaps = 29/322 (9%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLT 112
           E  +  FK   +K Y + EE   RF IF+ N+++   H KL      S   G+ QFSDL 
Sbjct: 53  EQAWKEFKILHDKTYDALEEESRRFEIFRENVQKIEEHNKLYHLGKKSYYLGVNQFSDLK 112

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EF + Y GL++     KD   +  L  N+L  P   DWR+KG V  VK+QG CGSCWS
Sbjct: 113 HEEFVK-YNGLKKTSL--KDGGCSSYLAANNLVEPDSVDWRKKGYVTDVKNQGQCGSCWS 169

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTG+LEG +F  +GKLVSLSE QLVDC      E       GCNGGLM++AF+Y    
Sbjct: 170 FSTTGSLEGQHFRKSGKLVSLSESQLVDCSQSFGNE-------GCNGGLMDNAFKYIKSV 222

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAAS-VANFSVVSLDEDQIAANLVKNGPLAVAIN 289
           GGL  EEDYPY    +   CKFD +K+AA+      V S  E  +   + + GP++VAI+
Sbjct: 223 GGLESEEDYPY--KPKQGTCKFDDTKVAATDTGCVDVESGSESALKKAVSEVGPVSVAID 280

Query: 290 AVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q+Y GGV   P   S +LDHGVL VGYG+          + YWI+KNSWG  WG
Sbjct: 281 ASHSSFQSYAGGVYDEPECSSEQLDHGVLCVGYGTDDQG------QDYWIVKNSWGAEWG 334

Query: 347 ENGYYKICRG-RNVCGVDSMVS 367
           E+GY K+ R  +N CG+ +  S
Sbjct: 335 EDGYVKMSRNKKNQCGIATQAS 356


>gi|126338866|ref|XP_001379280.1| PREDICTED: cathepsin F-like [Monodelphis domestica]
          Length = 567

 Score =  234 bits (598), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 178/314 (56%), Gaps = 23/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +NK+YA+  E   R  IF  NL  A + Q+LD  SA +G+T+FSDLT  EFR 
Sbjct: 270 FKDFLTTYNKSYANATETQRRLGIFARNLELAHKLQELDQGSAQYGVTKFSDLTEEEFRM 329

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            YL       LP  A +         PA +DWR+ GA+   K+QG CGSCW+FS TG +E
Sbjct: 330 FYLNPLLS-SLPGRALRPAPRARGPAPASWDWRDHGALTAAKNQGMCGSCWAFSVTGNVE 388

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G  FL  G L++LSEQ+LVDCD         + D  C GGL ++A+      GGL  E+D
Sbjct: 389 GQWFLRRGALLTLSEQELVDCD---------TLDQACGGGLPSNAYTAIETLGGLETEKD 439

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           Y Y G  R   C F   K  A + +   +S DE +IAA L +NGP+++A+NA  MQ Y  
Sbjct: 440 YSYEG--RKERCSFSPDKARAYINSSVDLSRDEQEIAAWLAENGPVSIALNAFAMQFYRR 497

Query: 299 GVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GVS P+  +CS   +DH VLLVGYG            P+W IKNSWG  WGE GYY + R
Sbjct: 498 GVSHPFRPLCSPWFIDHAVLLVGYGDR-------SGIPFWAIKNSWGPDWGEEGYYYLYR 550

Query: 356 GRNVCGVDSMVSTV 369
           G   CG+++M S+ 
Sbjct: 551 GARACGMNTMASSA 564


>gi|67773370|gb|AAY81942.1| cysteine protease 3 [Paragonimus westermani]
          Length = 321

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 135/320 (42%), Positives = 182/320 (56%), Gaps = 32/320 (10%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+ + K YA++++   RF IFK NL RA + Q  D  +A +G+TQFSDLTP 
Sbjct: 23  ARELYEQFKRDYGKVYANEDDQ-KRFAIFKDNLMRAQKLQLKDQGTARYGVTQFSDLTPE 81

Query: 115 EFRRTYLGLRRKLRLPKDADQAP-ILPT--NDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           EF   YL        P + DQ   + PT     P   DWR KGAV  V++QGSCGSCW+F
Sbjct: 82  EFAAKYLSA------PVNNDQVKRVRPTGLKAAPERIDWRAKGAVTAVENQGSCGSCWAF 135

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           ST G +EG  F+ TG+LVSLS+QQLVDCD   D         GCNGG   S++   +  G
Sbjct: 136 STAGNVEGQWFIKTGQLVSLSKQQLVDCDRAAD---------GCNGGWPASSYLEIMHMG 186

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  ++DYPY G      C  +K ++ A + +   +   ED  AA L ++GPL+  +NA+
Sbjct: 187 GLESQDDYPYAGVK--EQCFMEKERLLAKIDDSIALGPSEDDNAAYLAEHGPLSTLLNAI 244

Query: 292 YMQTYIGGVSCPYI--CSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            +Q Y  G+  P    CS   L+H VL VGY   G       + PYWIIKNSW   WGE 
Sbjct: 245 TLQYYQSGIIHPSYEECSPVDLNHAVLTVGYDKEG-------DMPYWIIKNSWNVEWGEK 297

Query: 349 GYYKICRGRNVCGVDSMVST 368
           GY+++ RG   CG++ M ++
Sbjct: 298 GYFRLYRGDGTCGINRMPTS 317


>gi|198427474|ref|XP_002119872.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 596

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/338 (40%), Positives = 194/338 (57%), Gaps = 45/338 (13%)

Query: 24  LIDDVDQ----LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQ-EEHD 78
           L+++ D+    ++R  TDG  +IL                F +F +K+ + Y+S  +E++
Sbjct: 145 LLNEFDKHTTNMVRPTTDGDVKIL----------------FDMFLEKYPRTYSSSSDEYN 188

Query: 79  HRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYL-GLRRKLRLPKDADQA 136
            RF IFK N +      +++  +A +GIT+F D++  E+ RT   G  R L +P     +
Sbjct: 189 ERFEIFKTNYQVVQHLNEIERGTAVYGITKFMDMSEEEYHRTLAPGFTRPL-VPIQTLNS 247

Query: 137 PILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQL 196
             L T ++P   DWR+ GAV  VK+QGSCGSCW+FSTTG +EG  FL   KL+SLSEQ+L
Sbjct: 248 AELDTTNIPDSMDWRKHGAVTEVKNQGSCGSCWAFSTTGNVEGQWFLKHKKLISLSEQEL 307

Query: 197 VDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSK 256
           VDCD         + DSGC GGL ++A++   K GGL  E+DYPY G   G  C   +S 
Sbjct: 308 VDCD---------TLDSGCGGGLPSNAYKSIEKLGGLEPEKDYPYVG--EGEKCAIKQSD 356

Query: 257 IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICS-RRLDHG 313
               V N   +  DE ++AA L +NGP+++ INA  MQ Y GG+S P+   C+ + LDHG
Sbjct: 357 FKVFVNNSVALPKDEVKLAAWLAQNGPISIGINANLMQFYWGGISHPWKIFCNPKSLDHG 416

Query: 314 VLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
           VL+VGYG+           P+WIIKNSWG  WGE   Y
Sbjct: 417 VLIVGYGTE-------NGTPFWIIKNSWGPDWGEEEEY 447



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/112 (49%), Positives = 71/112 (63%), Gaps = 11/112 (9%)

Query: 115 EFRRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           E+ RT   G  R L +P     +  L T ++P   DWR+ GAV  VK+QGSCGSCW+FST
Sbjct: 446 EYHRTLAPGFTRPL-VPIQTLNSAELDTTNIPDSMDWRKHGAVTEVKNQGSCGSCWAFST 504

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           TG +EG  FL   KL+SLSEQ+LVDCD         + DSGC GGL ++A++
Sbjct: 505 TGNVEGQWFLKHKKLISLSEQELVDCD---------TLDSGCGGGLPSNAYK 547



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 26/53 (49%), Positives = 33/53 (62%), Gaps = 2/53 (3%)

Query: 318 GYGSAGYAPIRLKEK--PYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           G  S  Y  I   E   P+WIIKNSWG  WGE GYY+I RG   CG+++M ++
Sbjct: 540 GLPSNAYKSIEKLENGTPFWIIKNSWGPDWGEEGYYRIYRGDGSCGLNNMATS 592


>gi|118395092|ref|XP_001029901.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89284178|gb|EAR82238.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 344

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 121/322 (37%), Positives = 177/322 (54%), Gaps = 31/322 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK KFNK Y ++ EH   F  +K +     +HQ  +P+A  G T+FSD++P EF   
Sbjct: 33  FEEFKSKFNKYYHNEHEHHSSFHNYKTSREHIVKHQMENPNAKFGHTKFSDMSPEEFENK 92

Query: 120 YL-------------GLRRKLRLPKD-ADQAPILPTNDLPADFDWREKGAVGPVKDQGSC 165
            L             G++ K    K    Q   +  +DLP  FDWR+KG + P K Q +C
Sbjct: 93  MLNFDFSLFKKAKSQGIKLKAEPMKGYLRQGENVDNSDLPESFDWRDKGIITPAKFQNTC 152

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           GSCW+F+TTG +E    L  G+L+  SEQ L+DCD         + + GC GGLM  A++
Sbjct: 153 GSCWTFATTGVIESQYALKYGELLHFSEQMLLDCD---------NINQGCRGGLMTDAYQ 203

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLA 285
           +  ++GG+   + Y     ++   C FDK+K+ A V ++  +  +E+ I   LVKNGP+A
Sbjct: 204 FLQQSGGIQTADTYG-DYKNKKDICNFDKAKVKAKVVDWYQIPENEETIRRELVKNGPVA 262

Query: 286 VAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           V INA  +Q Y GG+  P  C  +++H VL+VGYG         +  PYW+IKN WG  W
Sbjct: 263 VGINARTLQFYEGGIVDPKNCDDKINHAVLIVGYGVE-------EGIPYWLIKNQWGAEW 315

Query: 346 GENGYYKICRGRNVCGVDSMVS 367
           G  G++K+ RG+  CG+ +  S
Sbjct: 316 GIKGFFKLIRGKKQCGIHTYAS 337


>gi|46948154|gb|AAT07059.1| cathepsin F-like cysteine proteinase, partial [Brugia malayi]
          Length = 461

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 131/340 (38%), Positives = 187/340 (55%), Gaps = 32/340 (9%)

Query: 40  DEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP 99
           D  ++  E  N +       F  F KKF + Y+S EE   RF I+  N+  A + Q  + 
Sbjct: 139 DLAMNSQEWQNEEKKTLWSDFMTFIKKFKREYSSIEEQLDRFRIYLQNMNFAKKLQFEEK 198

Query: 100 -SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKG 154
            +A +G T+FSD+T  EF++  L      R+  +     +    L   +LP+ FDWR +G
Sbjct: 199 GTAIYGATKFSDMTAEEFQKIMLPSIWWDRVESNGITFNLNDFNLSIYNLPSKFDWRTEG 258

Query: 155 AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 214
            V PVKDQGSCGSCW+FS TG +E    + TGKL+SLSEQ+L+DCD           D G
Sbjct: 259 VVTPVKDQGSCGSCWAFSVTGNIESLWAIKTGKLISLSEQELIDCD---------VIDKG 309

Query: 215 CNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQI 274
           CNGGL  +AF    + GGL  E+ YPY    +   C   +++IA S+ +   +  +E  +
Sbjct: 310 CNGGLPINAFREIKRMGGLEPEDQYPYEA--KNGTCHLVRAQIAVSIDDAVEIPRNETVM 367

Query: 275 AANLVKNGPLAVAINAVYMQTYIGGV------SCPYICSRRLDHGVLLVGYGSAGYAPIR 328
            A + + GPL+V I+A  +  Y  G+       CP     +++HGVL+ GYG        
Sbjct: 368 KAWIAQRGPLSVGIDAELLSYYKSGILHPSKSRCP---PSKINHGVLITGYGIEN----- 419

Query: 329 LKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
               PYW IKNSWGE WGENGY+++ RG+N+CGV  +VS+
Sbjct: 420 --NLPYWTIKNSWGEQWGENGYFQLMRGKNICGVSDLVSS 457


>gi|443696723|gb|ELT97360.1| hypothetical protein CAPTEDRAFT_147978 [Capitella teleta]
          Length = 274

 Score =  234 bits (596), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 129/284 (45%), Positives = 174/284 (61%), Gaps = 22/284 (7%)

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
           RR    ++ D  AT+G + F+DLT  EFR+ YL     +        A I P    P  F
Sbjct: 5   RRIQEKEQGD--ATYGASPFADLTAEEFRKNYLSPVWNVTHDPFLKPASI-PIETPPDAF 61

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWR+  AV PVK+QGSCGSCW+FS TG +EG   +   KL+SLSEQ+LVDCD        
Sbjct: 62  DWRDHDAVTPVKNQGSCGSCWAFSVTGNVEGQWAIQKKKLLSLSEQELVDCDK------- 114

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
              D GCNGGL   A++  ++ GGL  E+DYPY G  +G  C F+K+++  ++     +S
Sbjct: 115 --VDLGCNGGLPLQAYKEIMRIGGLETEKDYPYEG--KGDKCVFEKAEVEVNITGAVNIS 170

Query: 269 LDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP--YICS-RRLDHGVLLVGYG-SAGY 324
            +ED + A L KNGP+++ +NA  MQ Y+GGVS P  ++CS   LDHGVL+ GYG   G+
Sbjct: 171 SNEDDMKAWLWKNGPISIGLNANAMQFYMGGVSHPFSFLCSPSSLDHGVLITGYGIKQGW 230

Query: 325 APIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
               + + P+W IKNSWGESWGE GYY + RG  VCGV+ M ++
Sbjct: 231 ----MSDSPFWAIKNSWGESWGEKGYYLLYRGAGVCGVNQMPTS 270


>gi|209978824|ref|YP_002300567.1| cathepsin [Adoxophyes orana nucleopolyhedrovirus]
 gi|192758806|gb|ACF05341.1| cathepsin [Adoxophyes orana nucleopolyhedrovirus]
          Length = 337

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/332 (38%), Positives = 184/332 (55%), Gaps = 32/332 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           D+  A+H+F  F   +NK YA  +  ++RF IF  NL       KL+ SA + I +FSDL
Sbjct: 24  DIHDAQHYFETFIVNYNKQYADTKTKNYRFKIFVQNLEYINEKNKLNDSAIYNINKFSDL 83

Query: 112 TPAEFRRTYLGL--RRKLRLPKDADQ--------APILPTNDLPADFDWREKGAVGPVKD 161
           +  E    Y GL  R+   + K            AP    ++LP +FDWR    +  VKD
Sbjct: 84  SKNELLTKYTGLTSRKPSNMVKSTSNFCNVIHLDAPPDARDELPQNFDWRVNNKMTSVKD 143

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QG+CGSCW+ +  G LE    +    L++LSEQQL+DCD         S +  C+GGLM+
Sbjct: 144 QGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMH 194

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVK 280
           +AFE  + AGGLM E DYPY GT +G  CK D  K A SV++    +  +E+ +   L+ 
Sbjct: 195 TAFEQLMNAGGLMEEIDYPYQGT-KG-ICKIDNKKFALSVSSCKRYIFQNEENLKKELIT 252

Query: 281 NGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
            GP+A+AI+A  + TY  G+   + C    L+H VLLVGYG+ G          YW +KN
Sbjct: 253 TGPIAMAIDAASISTYSKGI--IHFCENLGLNHAVLLVGYGTEGGV-------SYWTLKN 303

Query: 340 SWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           SWG  WGE+GY+++ R  N CG+++ ++  A 
Sbjct: 304 SWGSDWGEDGYFRVKRNINACGLNNQLAASAT 335


>gi|171702843|dbj|BAG16377.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 431

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 140/353 (39%), Positives = 192/353 (54%), Gaps = 34/353 (9%)

Query: 5   TVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFK 64
           TV+LFL  +VV SA+    +  D +               HH  ++   +     +  + 
Sbjct: 2   TVILFLAMIVVSSAMDMSIISYDKN---------------HHTVSSRSDVEVSRLYEEWV 46

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
            K  KA  S  E D RF IFK NLR    H   + S   G+T+F+DLT  E+R  YLG R
Sbjct: 47  VKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSMYLGSR 106

Query: 125 RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
            K +  K + +      + +P   DWR++GAV  VKDQGSCGSCW+FST GA+EG N + 
Sbjct: 107 LKRKATKTSLRYEARVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEGINKIV 166

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  EEDYPY G 
Sbjct: 167 TGDLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTEEDYPYKGV 218

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN--AVYMQTYIGGVSC 302
           D G   +  K+    ++ ++  V  + ++     + + P++VAI       Q Y  G+  
Sbjct: 219 D-GRCDQTRKNAKVVTIDSYEDVPANSEESLKKALSHQPISVAIEGGGRAFQLYDSGIF- 276

Query: 303 PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
             IC   LDHGV+ VGYG+          K YWI+KNSWG SWGE+GY ++ R
Sbjct: 277 DGICGTDLDHGVVAVGYGTE-------NGKDYWIVKNSWGTSWGESGYIRMER 322


>gi|91992514|gb|ABE72973.1| cathepsin L [Aedes aegypti]
          Length = 265

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 124/280 (44%), Positives = 168/280 (60%), Gaps = 26/280 (9%)

Query: 103 HGITQFSDLTPAEFRRTYLGLRRKLRLPKDAD-------QAPILPTNDLPADFDWREKGA 155
           +GIT F+D+T AE+R+     R  L +P+D D       +A I    +LP  FDWRE GA
Sbjct: 2   YGITHFADMTSAEYRQ-----RTGLVIPRDEDRNHVGNPKAEIDENMELPESFDWRELGA 56

Query: 156 VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGC 215
           V PVK+QG+CGSCW+FS  G +EG + + T  L   SEQ+L+DCD         + DS C
Sbjct: 57  VSPVKNQGNCGSCWAFSVVGNIEGLHQIKTKVLEEYSEQELLDCD---------AVDSAC 107

Query: 216 NGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIA 275
            GG M+ A++   K GGL  E +YPY    +   C F+ +++   V     +  +E  +A
Sbjct: 108 QGGYMDDAYKAIEKIGGLELESEYPYLAKKQ-KTCHFNSTEVHVRVKGAVDLPKNETAMA 166

Query: 276 ANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEK 332
             LV NGP+++ +NA  MQ Y GG+S P+  +CS++ LDHGVL+VGYG   Y P+  K  
Sbjct: 167 QYLVANGPISIGLNANAMQFYRGGISHPWKPLCSKKNLDHGVLIVGYGVKEY-PMFNKTM 225

Query: 333 PYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           PYWI+KNSWG  WGE GYY+I RG N CGV  M S+   A
Sbjct: 226 PYWIVKNSWGPKWGEQGYYRIFRGDNTCGVSEMASSAVLA 265


>gi|321460289|gb|EFX71333.1| hypothetical protein DAPPUDRAFT_189155 [Daphnia pulex]
          Length = 266

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 123/272 (45%), Positives = 163/272 (59%), Gaps = 15/272 (5%)

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPV 159
           +A +G T FSD + AE++    G    LR      +   +P  DLP +FDWR    V PV
Sbjct: 3   TAVYGDTPFSDWSAAEYKAHLAGFNPSLRQSNARLRQAAIPEIDLPDEFDWRNHSVVTPV 62

Query: 160 KDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           KDQGSCGSCW+FS TG +EG   +  G L+SLSEQ+LVDCD           DSGCNGGL
Sbjct: 63  KDQGSCGSCWAFSVTGNVEGIYAVRNGDLLSLSEQELVDCD---------KLDSGCNGGL 113

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV 279
             +A++     GGL  E DYPY G +  + CKF+ +     V     +S +E ++A  L+
Sbjct: 114 PENAYKAIHDIGGLETESDYPYNGHE--NKCKFNSNITRVQVTGGVEISTNETEMAQWLI 171

Query: 280 KNGPLAVAINAVYMQTYIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           +NGP+++ INA  MQ Y GGVS P+    R   +DHGVL+VGYG + Y P   K  PYWI
Sbjct: 172 QNGPISIGINANAMQYYRGGVSHPWKVLCRPGGIDHGVLIVGYGVSQY-PKFNKTLPYWI 230

Query: 337 IKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           +KNSWG  WGE GYY++ RG   CG++ M ++
Sbjct: 231 VKNSWGTRWGEQGYYRVFRGDGTCGLNQMCTS 262


>gi|375073980|gb|AFA34857.1| cathepsin L-like protein [Trypanosoma cruzi marinkellei]
          Length = 467

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/314 (43%), Positives = 173/314 (55%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR- 117
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYKSAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 118 RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           R + G        + A     +    +PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVNVEVVGVPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC+GGLMN AFE+ ++   G +  
Sbjct: 157 ESQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNDAFEWIVQENDGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           EE YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EESYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAANGPVAVAVDATSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +  AP+     PYWIIKNSW   WGE+GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDS--APV-----PYWIIKNSWTTLWGEDGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|343470378|emb|CCD16903.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 174/310 (56%), Gaps = 25/310 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK ++ RA      +P AT G+TQFSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TYL G +      K   +   + T   P   DWR+KGAV PVKDQG CGSCW+FS  G
Sbjct: 98  RATYLNGAKYYAAALKRPRKVVNVSTGKAPPAIDWRKKGAVTPVKDQGKCGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD+          D GC GG ++ A ++ + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCDN---------MDYGCRGGFLDRALKWIVSSNKGNV 208

Query: 234 MREEDYPYTGTDRG-HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             EE YPY  TD     C      + A ++    +  DE+ IA  L KNGP+A+A++A  
Sbjct: 209 FTEESYPYDSTDGDVPPCNKSGKVVGAKISGLINLPKDENAIAEWLAKNGPIAIAVDASS 268

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
              Y GGV  SC    S  L+HGVLLVGY  +        + PYWIIKNSWG+ WGE GY
Sbjct: 269 FLDYTGGVLTSCS---SDALNHGVLLVGYDDS-------SKPPYWIIKNSWGKKWGEEGY 318

Query: 351 YKICRGRNVC 360
            ++ +G N C
Sbjct: 319 IRVEKGTNQC 328


>gi|118157|sp|P25779.1|CYSP_TRYCR RecName: Full=Cruzipain; AltName: Full=Cruzaine; AltName:
           Full=Major cysteine proteinase; Flags: Precursor
 gi|162048|gb|AAA30181.1| cruzain [Trypanosoma cruzi]
 gi|29409382|gb|AAM33131.1| cysteine proteinase precursor [Trypanosoma cruzi]
          Length = 467

 Score =  233 bits (593), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 170/314 (54%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC+GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNSW   WGE GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEEGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|11464864|gb|AAG35357.1|AF314929_1 cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 170/314 (54%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC+GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNSW   WGE GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEEGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|1136308|gb|AAB41119.1| cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 170/314 (54%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYGSAAEEAFRLSVFRENLFLARLHAAANPHATFGVTAFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVNVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYW+IKNSW   WGE+GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWVIKNSWTTQWGEDGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|71666430|ref|XP_820174.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70885508|gb|EAN98323.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 467

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 170/314 (54%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVNVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNSW   WGE+GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTAQWGEDGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|71663163|ref|XP_818578.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70883837|gb|EAN96727.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 467

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 170/314 (54%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAVHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC+GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNSW   WGE GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEEGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|326430490|gb|EGD76060.1| cysteine proteinase [Salpingoeca sp. ATCC 50818]
          Length = 448

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 142/314 (45%), Positives = 182/314 (57%), Gaps = 35/314 (11%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAE 115
           F  FK KFNK Y S EE   RF++F  N+    RH        H     + QF+DLT  E
Sbjct: 30  FDAFKTKFNKVYESAEEEARRFSVFSQNIDFINRHNAEAARGVHTHTVDVNQFADLTNEE 89

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           +R+ YL       L ++  +  +   N      DWR+KGAV P+K+QG CGSCWSFSTTG
Sbjct: 90  YRQLYLRPYPTELLGRERQEVWLDGPN--AGSVDWRQKGAVTPIKNQGQCGSCWSFSTTG 147

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           ++EGA+ +ATG LVSLSEQQLVDC            + GCNGGLM++AF+Y +  GGL  
Sbjct: 148 SVEGAHAIATGNLVSLSEQQLVDCSGSFG-------NQGCNGGLMDNAFKYIISNGGLDT 200

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINA--VY 292
           E+DYPYT  D G   K  +SK A S++ +  V   +EDQ+AA  V+ GP++VAI A    
Sbjct: 201 EQDYPYTARD-GVCDKSKESKHAVSISGYKDVPQNNEDQLAA-AVEKGPVSVAIEADQQS 258

Query: 293 MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Q Y  GV S P  C   LDHGVL+VGY S            YWI+KNSWG SWG+ GY 
Sbjct: 259 FQMYSSGVFSGP--CGTNLDHGVLVVGYTS-----------DYWIVKNSWGASWGDQGYI 305

Query: 352 KICRGRN---VCGV 362
            + RG +   +CG+
Sbjct: 306 MMKRGVSSAGICGI 319


>gi|71406896|ref|XP_805951.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70869552|gb|EAN84100.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 426

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/316 (42%), Positives = 171/316 (54%), Gaps = 21/316 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC+GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNSW   WGE GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSA-------AVPYWIIKNSWTTQWGEEGYIRIA 319

Query: 355 RGRNVCGVDSMVSTVA 370
           +G N C V    S+ A
Sbjct: 320 KGLNQCLVKEEASSAA 335


>gi|66814630|ref|XP_641494.1| cysteine protease [Dictyostelium discoideum AX4]
 gi|118121|sp|P04989.1|CYSP2_DICDI RecName: Full=Cysteine proteinase 2; AltName: Full=Prestalk
           cathepsin; Flags: Precursor
 gi|167860|gb|AAA33240.1| pst-cathepsin [Dictyostelium discoideum]
 gi|1834417|emb|CAA27050.1| cysteine proteinase 2 [Dictyostelium discoideum]
 gi|60469522|gb|EAL67513.1| cysteine protease [Dictyostelium discoideum AX4]
 gi|225484|prf||1304284A cathepsin,prestalk
          Length = 376

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/346 (40%), Positives = 187/346 (54%), Gaps = 47/346 (13%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAAR-HQKLDPSATHGITQFSDLTPAEFRR 118
           F+ +  KFN+ Y+S E   +R++IFK+N+      + K D     G+  F+D+T  E+R+
Sbjct: 36  FTEWTLKFNRQYSSSE-FSNRYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRK 94

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           TYLG R         D   +L   DL   P   DWR K AV P+KDQG CGSCWSFSTTG
Sbjct: 95  TYLGTRVNAHSYNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTG 154

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           + EGA+ L T KLVSLSEQ LVDC     PEE    + GC+GGLMN+AF+Y +K  G+  
Sbjct: 155 STEGAHALKTKKLVSLSEQNLVDC---SGPEE----NFGCDGGLMNNAFDYIIKNKGIDT 207

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--M 293
           E  YPYT  + G  C F+KS I A++  +  ++   +    N  ++GP++VAI+A +   
Sbjct: 208 ESSYPYTA-ETGSTCLFNKSDIGATIKGYVNITAGSEISLENGAQHGPVSVAIDASHNSF 266

Query: 294 QTYIGGVSCPYICS-RRLDHGVLLVGYGSAG----------------------------- 323
           Q Y  G+     CS   LDHGVL+VGYG  G                             
Sbjct: 267 QLYTSGIYYEPKCSPTELDHGVLVVGYGVQGKDDEGPVLNRKQTIVIHKNEDNKVESSDD 326

Query: 324 -YAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
               +R K   YWI+KNSWG SWG  GY  + + R N CG+ S+ S
Sbjct: 327 SSDSVRPKANNYWIVKNSWGTSWGIKGYILMSKDRKNNCGIASVSS 372


>gi|19747207|gb|AAL96762.1|AC104496_8 Tcc1l8.8 [Trypanosoma cruzi]
          Length = 500

 Score =  232 bits (591), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 170/314 (54%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 70  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 129

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 130 RYHNGAVHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 189

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC+GGLMN+AFE+ ++   G +  
Sbjct: 190 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQENNGAVYT 240

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 241 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 300

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNSW   WGE GY +I 
Sbjct: 301 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEEGYIRIA 352

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 353 KGLNQCLVKEEASS 366


>gi|297793593|ref|XP_002864681.1| hypothetical protein ARALYDRAFT_496172 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297310516|gb|EFH40940.1| hypothetical protein ARALYDRAFT_496172 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 361

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 148/371 (39%), Positives = 196/371 (52%), Gaps = 34/371 (9%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH- 59
           M +KTV+  +V +++ +A ++  +  D    IR V+DG  E+    E T + +LG   H 
Sbjct: 1   MSAKTVLSSVVLVILIAASAAADIGFDELNPIRMVSDGLREV----EETVSQILGQSRHV 56

Query: 60  --FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
             F+ F  ++ K Y + EE   RF+IFK NL       K   S   G+ QF+DLT  EF+
Sbjct: 57  LTFARFTHRYGKKYQNVEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQ 116

Query: 118 RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           RT LG  +             L    LP   DWRE G V PVKDQG CGSCW+FSTTGAL
Sbjct: 117 RTKLGAAQNCSATLKGSHK--LTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGAL 174

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           E A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE
Sbjct: 175 EAAYHQAFGKGISLSEQQLVDCAGAYN-------NYGCNGGLPSQAFEYIKSNGGLDTEE 227

Query: 238 DYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-M 293
            YPY G D    CKF    +   V    N ++ + DE + A  LV+  P+++A   ++  
Sbjct: 228 AYPYIGKD--GTCKFSAENVGVQVLDSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSF 283

Query: 294 QTYIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           + Y  GV     C      ++H VL VGYG            PYW+IKNSWG  WG+ GY
Sbjct: 284 RLYKSGVYTDSHCGSTPMDVNHAVLAVGYGVE-------DGVPYWLIKNSWGADWGDKGY 336

Query: 351 YKICRGRNVCG 361
           +K+  G+N+CG
Sbjct: 337 FKMEMGKNMCG 347


>gi|343477619|emb|CCD11596.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  231 bits (590), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 173/310 (55%), Gaps = 25/310 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK ++ RA      +P AT G+TQFSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TYL G +      K   +   + T   P   DWR+KGAV PVKDQ  CGSCW+FS  G
Sbjct: 98  RATYLNGAKYYAAALKRPRKVVTVSTGKAPPAIDWRKKGAVTPVKDQRKCGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD+          D GC GGLM+ A ++ + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCDN---------MDDGCQGGLMDRALKWIVSSNKGNV 208

Query: 234 MREEDYPYTGTDRG-HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             EE YPY  TD     C      + A ++    +  DE+ IA  L KNGP+A+A++A  
Sbjct: 209 FTEESYPYDSTDGDVPPCNKSGKVVGAKISGLINLPKDENAIAEWLAKNGPIAIAVDASS 268

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
              Y GGV  SC    S  L+H VLLVGY  +        + PYWIIKNSWG+ WGE GY
Sbjct: 269 FLDYTGGVLTSCS---SDALNHDVLLVGYDDSS-------KPPYWIIKNSWGKKWGEEGY 318

Query: 351 YKICRGRNVC 360
            ++ +G N C
Sbjct: 319 IRVEKGTNQC 328


>gi|18141285|gb|AAL60580.1|AF454958_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 485

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 139/357 (38%), Positives = 192/357 (53%), Gaps = 34/357 (9%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           + S TV+LFL  +VV SA+    +  D +               HH  ++         +
Sbjct: 4   LNSATVILFLTMIVVSSAMDMSIISYDKN---------------HHTVSSRSDAEVSRLY 48

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTY 120
             +  K  KA  S  E D RF IFK NLR    H   + S   G+T+F+DLT  E+R  Y
Sbjct: 49  EEWLVKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSMY 108

Query: 121 LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
           LG R K +  K + +  +   + +P   DWR++GAV  VKDQGSCGSCW+FST GA+EG 
Sbjct: 109 LGSRLKRKATKSSLRYEVRVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEGI 168

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           N + TG L++LSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  EEDYP
Sbjct: 169 NKIVTGDLITLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDTEEDYP 220

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN--AVYMQTYIG 298
           Y G D G   +  K+    ++  +  V  + ++     + + P++VAI       Q Y  
Sbjct: 221 YKGVD-GRCDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQPISVAIEGGGRAFQLYDS 279

Query: 299 GVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           G+    IC   LDHGV+ VGYG+          K YWI+KNSWG SWGE+GY ++ R
Sbjct: 280 GIF-DGICGTDLDHGVVAVGYGTE-------NGKDYWIVKNSWGTSWGESGYIRMER 328


>gi|343475823|emb|CCD12886.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/313 (40%), Positives = 173/313 (55%), Gaps = 21/313 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG C S W+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGRPPMTVDWRKKGAVTPVKDQGKCDSSWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGGL 233
            +EG   +A  +L SLSEQ LV CD         + D GC  GL + AF++ L    G +
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCD---------TNDLGCELGLKDPAFQWILWSNKGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      C      + A ++N   + LDED IA  L + GP+A+A++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCDMSGKVVGAKISNMRYLPLDEDTIAEWLARKGPVAIAVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q Y GGV    I SRRL++G LLVGY           + PYWIIKNSWG+ WGE GY +
Sbjct: 269 FQRYTGGVLTSCI-SRRLNYGALLVGYDDT-------SKPPYWIIKNSWGKGWGEEGYIR 320

Query: 353 ICRGRNVCGVDSM 365
           I +G N C V ++
Sbjct: 321 IEKGTNQCLVKNL 333


>gi|302763831|ref|XP_002965337.1| hypothetical protein SELMODRAFT_230602 [Selaginella moellendorffii]
 gi|300167570|gb|EFJ34175.1| hypothetical protein SELMODRAFT_230602 [Selaginella moellendorffii]
          Length = 343

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 183/322 (56%), Gaps = 34/322 (10%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHGITQFSDLT 112
           L  ++ F  +  K  K+Y+S  E   R  IF   L    +H  + + + T G+ +FSDLT
Sbjct: 35  LEIKNMFEDWAAKHGKSYSSDLEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLT 94

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSC 168
            AEFR  ++G   K + P+  D+ P     +  + LP   DWR+KGAV P+KDQG CGSC
Sbjct: 95  NAEFRAMHVG---KFKRPRYQDRLPAEDEDVDVSSLPTSLDWRQKGAVTPIKDQGDCGSC 151

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           W+FS   ++E A+FLAT +LVSLSEQQL+DCD         + D+GC+GGLM +AF++ +
Sbjct: 152 WAFSAIASIESAHFLATKELVSLSEQQLMDCD---------TVDAGCDGGLMETAFKFVV 202

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSKI---AASVANFSVVSLDEDQIAANLVKNGPLA 285
           K GG+  E  YPYTG+    +C  +K  I    A +  F VV+ D        V   P+ 
Sbjct: 203 KNGGVTTEASYPYTGS--VGSCNANKVAIINKVAEITGFKVVTEDSADALMKAVSKTPVT 260

Query: 286 VAI--NAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           V+I  +    Q Y  G+     C   LDHGVLL+GYG+ G         PYWIIKNSWG 
Sbjct: 261 VSICGSDENFQNYKSGILSGQ-CGDSLDHGVLLIGYGTEG-------GMPYWIIKNSWGT 312

Query: 344 SWGENGYYKICR--GRNVCGVD 363
           SWGE+G+ KI R  G  +CG++
Sbjct: 313 SWGEDGFMKIERKDGDGICGMN 334


>gi|375073976|gb|AFA34855.1| cathepsin L-like protein [Trypanosoma cruzi]
          Length = 467

 Score =  231 bits (588), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 169/314 (53%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYGSAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVNVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E  YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EGSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYW+IKNSW   WGE+GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWVIKNSWTTQWGEDGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|559532|emb|CAA57675.1| cysteine proteinase [Zea mays]
          Length = 145

 Score =  230 bits (587), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 109/139 (78%), Positives = 123/139 (88%), Gaps = 5/139 (3%)

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           E+DYPYTG+D    CKFDKSKI ASV NFSVVS+DE QI+AN +K+GPLA+ INA YMQT
Sbjct: 3   EKDYPYTGSDG--KCKFDKSKIVASVQNFSVVSVDEAQISANRIKHGPLAIGINAAYMQT 60

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           YIGGVSCPYIC R LDHGVLLVGYG++G+AP+RLK+KPYWIIKNSWGE+WGENGYYKICR
Sbjct: 61  YIGGVSCPYICGRHLDHGVLLVGYGASGFAPMRLKDKPYWIIKNSWGENWGENGYYKICR 120

Query: 356 G---RNVCGVDSMVSTVAA 371
           G   RN CGVDSMVSTV+A
Sbjct: 121 GSNVRNKCGVDSMVSTVSA 139


>gi|146335582|gb|ABQ23400.1| cathepsin L isotype 3 [Trypanoplasma borreli]
          Length = 442

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 131/322 (40%), Positives = 184/322 (57%), Gaps = 27/322 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F  FK    + YAS +E   RF IF AN+++AA   + +P AT G  +F+D++  EF
Sbjct: 22  EVLFRDFKTTHARNYASADEERKRFEIFAANMKKAAELNRKNPMATFGPNEFADMSSEEF 81

Query: 117 RRTYLGLRR----KLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSF 171
           +  +   R       R PK+         N  +    DWR KGAV PVK+QGSCGSCWSF
Sbjct: 82  QTRHNAARHYAAVMARPPKNTKTFTEEEINAAVGQKVDWRLKGAVTPVKNQGSCGSCWSF 141

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA- 230
           STTG +EG + +ATG+LVSLSEQ+LV CD         + D GC+GGLM++AF + L A 
Sbjct: 142 STTGNIEGQHAIATGQLVSLSEQELVSCD---------TVDDGCSGGLMDNAFGWLLSAH 192

Query: 231 -GGLMREEDYPY-TGTDRGHACKFDKSK--IAASVANFSVVSLDEDQIAANLVKNGPLAV 286
            G +  E  YPY +G     AC F+ +   + A++ +F  +   E  +AA + K GPL++
Sbjct: 193 NGQITTEASYPYVSGNGIVPACTFNSNSNPVGATITSFHDIPKTERDMAAFVFKYGPLSI 252

Query: 287 AINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
            ++A   Q+YIGG+   +    ++DHGVL+VG+             PYWIIKNSW   WG
Sbjct: 253 GVDASSWQSYIGGI-LSHCSDVQIDHGVLIVGFDDTA-------STPYWIIKNSWSSMWG 304

Query: 347 ENGYYKICRGRNVCGVDSMVST 368
           E GY ++ +G N CG+ S  S+
Sbjct: 305 EQGYIRVAKGSNQCGLTSFPSS 326


>gi|29567137|ref|NP_818699.1| cathepsin [Adoxophyes honmai NPV]
 gi|37076951|sp|Q80LP4.1|CATV_NPVAH RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|29467913|dbj|BAC67303.1| cathepsin [Adoxophyes honmai NPV]
          Length = 337

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 127/332 (38%), Positives = 184/332 (55%), Gaps = 32/332 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           D+  A+H+F  F   +NK Y   +  ++RF IFK NL       KL+ SA + I +FSDL
Sbjct: 24  DIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDL 83

Query: 112 TPAEFRRTYLGL--RRKLRLPKDADQ--------APILPTNDLPADFDWREKGAVGPVKD 161
           +  E    Y GL  ++   + +            AP    ++LP +FDWR    +  VKD
Sbjct: 84  SKNELLTKYTGLTSKKPSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKD 143

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QG+CGSCW+ +  G LE    +    L++LSEQQL+DCD         S +  C+GGLM+
Sbjct: 144 QGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMH 194

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVK 280
           +AFE  + AGGLM E DYPY GT +G  CK D  K A SV++    +  +E+ +   L+ 
Sbjct: 195 TAFEQLMNAGGLMEEIDYPYQGT-KG-VCKIDNKKFALSVSSCKRYIFQNEENLKKELIT 252

Query: 281 NGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
            GP+A+AI+A  + TY  G+   + C    L+H VLLVGYG+ G          YW +KN
Sbjct: 253 MGPIAMAIDAASISTYSKGI--IHFCENLGLNHAVLLVGYGTEGGV-------SYWTLKN 303

Query: 340 SWGESWGENGYYKICRGRNVCGVDSMVSTVAA 371
           SWG  WGE+GY+++ R  N CG+++ ++  A 
Sbjct: 304 SWGSDWGEDGYFRVKRNINACGLNNQLAASAT 335


>gi|343476708|emb|CCD12273.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 363

 Score =  230 bits (587), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 180/317 (56%), Gaps = 23/317 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PV+D+  C S W+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVTVSTGKAPDAVDWRKKGAVTPVRDERLCDSSWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ L+ CD   D         GC GGLM+ AF++ + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLLSCDTRED---------GCGGGLMDRAFQWIVSSNKGNV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK--IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPY  TD G   + +KS   + A ++++  +  DE+ IA  L KNGP+A+A+ A 
Sbjct: 209 FTEQSYPYASTD-GDVPRCNKSGKVVGAKISDYVDLPQDENAIAEWLAKNGPVAIAVEAT 267

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            +Q Y GGV    I S +LDHGVLLVGY           + PYWIIKNSWG+ WGE GY 
Sbjct: 268 SLQRYTGGVLTSCI-SEQLDHGVLLVGYDDT-------SKPPYWIIKNSWGKGWGEEGYI 319

Query: 352 KICRGRNVCGVDSMVST 368
           +I +G N C + +  S+
Sbjct: 320 RIEKGTNQCLMKNYASS 336


>gi|375073978|gb|AFA34856.1| cathepsin L-like protein [Trypanosoma cruzi]
          Length = 467

 Score =  230 bits (586), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 130/314 (41%), Positives = 169/314 (53%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVNVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC+GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AV ++A    
Sbjct: 208 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVGVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNSW   WGE GY ++ 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEGGYIRVA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|171702831|dbj|BAG16371.1| cysteine protease [Brassica oleracea var. italica]
          Length = 441

 Score =  230 bits (586), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/353 (39%), Positives = 190/353 (53%), Gaps = 34/353 (9%)

Query: 5   TVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFK 64
           TV+LFL  +VV SA+    +  D +               HH  ++         +  + 
Sbjct: 2   TVILFLTMIVVSSAMDMSIISYDKN---------------HHTVSSRSDAEVSRLYEEWL 46

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
            K  KA  S  E D RF IFK NLR    H   + S   G+T+F+DLT  E+R  YLG R
Sbjct: 47  VKHGKAQNSLTEKDRRFEIFKDNLRFIDEHNGKNLSYRLGLTKFADLTNDEYRSMYLGSR 106

Query: 125 RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
            K +  K + +  +   + +P   DWR++GAV  VKDQGSCGSCW+FST GA+EG N + 
Sbjct: 107 LKRKATKSSLRYEVRVGDAIPESVDWRKEGAVAEVKDQGSCGSCWAFSTIGAVEGINKIV 166

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TG L++LSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  EEDYPY G 
Sbjct: 167 TGDLITLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYKGV 218

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN--AVYMQTYIGGVSC 302
           D G   +  K+    ++  +  V  + ++     + + P++VAI       Q Y  G+  
Sbjct: 219 D-GRCDQTRKNAKVVTIDLYEDVPANSEESLKKALSHQPISVAIEGGGRAFQLYDSGIF- 276

Query: 303 PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
             IC   LDHGV+ VGYG+          K YWI+KNSWG SWGE+GY ++ R
Sbjct: 277 DGICGTDLDHGVVAVGYGTE-------NGKDYWIVKNSWGTSWGESGYIRMER 322


>gi|110349473|gb|ABG73217.1| cathepsin L 1 precursor [Diaprepes abbreviatus]
          Length = 322

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/309 (43%), Positives = 179/309 (57%), Gaps = 26/309 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLTPAE 115
           F  FK K  K Y +Q E   RF IFK NLR   +H  L      S   GI +F+D+T  E
Sbjct: 25  FQAFKLKHGKTYKNQVEETARFNIFKDNLRAIEQHNVLYEQGLVSYKKGINRFTDMTQEE 84

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           FR  +L L    + P       +L    +P   DWR KG V  VKDQG+CGSCW+FS TG
Sbjct: 85  FR-AFLTLSSSKK-PHFNTTEHVLTGLAVPDSIDWRTKGQVTGVKDQGNCGSCWAFSVTG 142

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           + E A +   GKLVSLSEQQLVDC  +         ++GCNGG ++  F Y +K+ GL  
Sbjct: 143 STEAAYYRKAGKLVSLSEQQLVDCSTD--------INAGCNGGYLDETFTY-VKSKGLEA 193

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E  YPY GTD   +CK+  SK+   V+   S+ S DE+ +   +   GP++VAI+A Y+ 
Sbjct: 194 ESTYPYKGTD--GSCKYSASKVVTKVSGHKSLKSEDENALLDAVGNVGPVSVAIDATYLS 251

Query: 295 TYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           +Y  G+     CS   L+HGVL+VGYG++         K YWI+KNSWG S+GE+GY+++
Sbjct: 252 SYESGIYEDDWCSPSELNHGVLVVGYGTS-------NGKKYWIVKNSWGGSFGESGYFRL 304

Query: 354 CRGRNVCGV 362
            RG+N CGV
Sbjct: 305 LRGKNECGV 313


>gi|71663165|ref|XP_818579.1| cruzipain precursor [Trypanosoma cruzi strain CL Brener]
 gi|70883838|gb|EAN96728.1| cruzipain precursor, putative [Trypanosoma cruzi]
          Length = 467

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 169/314 (53%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           D GC+GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DFGCSGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNSW   WGE GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTTQWGEEGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|118429523|gb|ABK91809.1| cathepsin L-like proteinase precursor [Clonorchis sinensis]
          Length = 373

 Score =  229 bits (585), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 142/336 (42%), Positives = 184/336 (54%), Gaps = 38/336 (11%)

Query: 52  DLLGAEHHFSL------FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSA 101
           D++G + +F+L      F   + + Y    EH+ RF IF  N  R ++H     +   S 
Sbjct: 52  DVIGVDWNFTLSSIWKHFMTTYKRNYIDPSEHERRFKIFANNFVRISKHNVRFIQGQVSY 111

Query: 102 THGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKD 161
           T GI +FSD T  E +R     R  L   +D  +  I      P++ DWR KGAV PVK+
Sbjct: 112 TMGINEFSDKTDEELKRLRC-FRGSLNASRDGSKY-ITIAAPPPSEIDWRNKGAVTPVKN 169

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QG+CGSCW+FS TGA+EG NFLATG LVSLSEQQLVDC  E         ++ CNGGLM+
Sbjct: 170 QGNCGSCWAFSATGAIEGQNFLATGNLVSLSEQQLVDCSSEYG-------NNACNGGLMD 222

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHA---CKFDKSKIAASVANFSVVSLDEDQIA--- 275
           +AF+Y   + G+  E  YPY   + G A   C+F+  +    V  +  + L   Q++   
Sbjct: 223 NAFKYVKDSNGIDTEASYPYVSGETGDANPTCRFNLKEAVVRVTGY--IDLPRGQVSELK 280

Query: 276 ANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEK 332
             +   GP++VAINA      +Y  GV     CS   LDHGVLLVGYG            
Sbjct: 281 QAVGHYGPISVAINAGLPSFMSYKSGVYSDDQCSSDDLDHGVLLVGYGEE-------NGI 333

Query: 333 PYWIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           PYW+IKNSWG  WGENGY KI R   N+CGV SM S
Sbjct: 334 PYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMAS 369


>gi|225438807|ref|XP_002283263.1| PREDICTED: germination-specific cysteine protease 1-like isoform 1
           [Vitis vinifera]
          Length = 374

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/303 (42%), Positives = 173/303 (57%), Gaps = 24/303 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           +  +  K  KAY    E + RF IFK NL+    H   + +   G+ +F+DLT  E+R  
Sbjct: 46  YQWWMAKHGKAYNGLGEKEKRFEIFKDNLKFIDEHNAQNRTYKVGLNRFADLTNEEYRAI 105

Query: 120 YLGLRR--KLRLPKDADQAP---ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           YLG R   K R  K  + +P   ++P   LP   DWRE GAV PVKDQ SCGSCW+FST 
Sbjct: 106 YLGTRSDPKRRFAKLKNASPRYAVMPGEVLPESVDWRETGAVNPVKDQRSCGSCWAFSTV 165

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
            A+EG N + TG+L+SLSEQ+LVDCD E         D GCNGGLM+ AF++ +K GGL 
Sbjct: 166 AAVEGINQIVTGELISLSEQELVDCDTE--------YDMGCNGGLMDYAFDFIIKNGGLD 217

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VY 292
            E+DYPYTG D G      KS    S+  +  V   +++     V + P++VA+ A    
Sbjct: 218 TEKDYPYTGFD-GECNLSGKSSKVVSIDGYEDVPPFDEKALQKAVAHQPVSVAVEAGGRA 276

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           +Q Y+ G+     C   LDHG++ VGYG+            YWI++NSWG SWGENGY +
Sbjct: 277 LQLYVSGIFTGE-CGTALDHGIVAVGYGTE-------NGTDYWIVRNSWGSSWGENGYIR 328

Query: 353 ICR 355
           + R
Sbjct: 329 MER 331


>gi|302790828|ref|XP_002977181.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
 gi|300155157|gb|EFJ21790.1| hypothetical protein SELMODRAFT_106402 [Selaginella moellendorffii]
          Length = 337

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 184/320 (57%), Gaps = 32/320 (10%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHGITQFSDLT 112
           L  ++ F  +  K  K+Y+S  E   R  IF   L    +H  + + + T G+ +FSDLT
Sbjct: 31  LEIKNMFEDWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLT 90

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSC 168
            AEFR  ++G   K + P+  D+ P     +  + LP   DWR+KGAV P+KDQG CGSC
Sbjct: 91  NAEFRAMHVG---KFKRPRYQDRLPAEDEDVDVSSLPTSLDWRQKGAVTPIKDQGDCGSC 147

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           W+FS   ++E A+FLAT +LVSLSEQQL+DCD         + D+GC+GGLM +AF++ +
Sbjct: 148 WAFSAIASIESAHFLATKELVSLSEQQLMDCD---------TVDAGCDGGLMETAFKFVV 198

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSK-IAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
           K GG+  E  YPYTG+    +C  +K+K   A +  F VV+ D        V   P+ V+
Sbjct: 199 KNGGVTTEAAYPYTGS--VGSCNANKAKNKVAEITGFKVVTEDSADALMKAVSKTPVTVS 256

Query: 288 I--NAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           I  +    Q Y  G+     C   LDHGVLL+GYG+ G         PYWIIKNSWG SW
Sbjct: 257 ICGSDENFQNYKSGI-LSGKCDDSLDHGVLLIGYGTEG-------GMPYWIIKNSWGTSW 308

Query: 346 GENGYYKICR--GRNVCGVD 363
           GE+G+ KI R  G  +CG++
Sbjct: 309 GEDGFMKIERKDGDGMCGMN 328


>gi|358339354|dbj|GAA47434.1| cathepsin F [Clonorchis sinensis]
          Length = 603

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/322 (40%), Positives = 183/322 (56%), Gaps = 30/322 (9%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK+K+ K Y + ++ ++RF++FK NL RA + Q ++  +A +G+TQF DLT  
Sbjct: 303 ARQLYEEFKQKYKKTYVNDDD-EYRFSVFKENLLRAHQLQTMEQGTAEYGVTQFFDLTSQ 361

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YLG + +       D   + P+  +  D   FDWR+ GAVGPV DQG CGSCW+F
Sbjct: 362 EFQIQYLGFKYE----DMQDTEEMSPSTRVVMDEDSFDWRDHGAVGPVLDQGKCGSCWAF 417

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           ST G +EG  FL TG+L+SLSEQQL+DCD         + D GCNGG     +   +K G
Sbjct: 418 STIGNIEGQWFLKTGELLSLSEQQLIDCD---------NVDEGCNGGYPPKTYGAVIKMG 468

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL    DYPY        C  D+ K+   + +  V   +E   A  L   GPL+ A+NA 
Sbjct: 469 GLELNSDYPYKAL--AEKCHMDRQKLKVYINDSVVFPRNEHLQAEALKLMGPLSSALNAN 526

Query: 292 YMQTYIGGVSCPYICS---RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            ++ Y  G+    + S   R L+H VL VGYG+           PYW +KNSWG ++GE+
Sbjct: 527 PLKFYKTGIMHLPVASCFPRALNHAVLTVGYGTE-------NGLPYWTVKNSWGTAFGED 579

Query: 349 GYYKICRGRNVCGVDSMVSTVA 370
           GY++I RG   CG++ +VST A
Sbjct: 580 GYFRIYRGGGTCGINRLVSTAA 601



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/206 (42%), Positives = 115/206 (55%), Gaps = 23/206 (11%)

Query: 147 DFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPE 206
           +FDWR+ GAVGPV +QG CGSCW+FS  G +EG  FL +G+L+ LS QQ++DCDH     
Sbjct: 42  NFDWRQHGAVGPVWNQGPCGSCWAFSAVGNIEGQWFLKSGELLHLSVQQVLDCDH----- 96

Query: 207 EPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSV 266
                D GCNGG     +    + GGL  + DY Y        C  D+SK  A V N SV
Sbjct: 97  ----VDHGCNGGYPPQVYRQVNQMGGLQLDADYSYKAAV--GKCHTDRSKFRAYV-NSSV 149

Query: 267 VSLDEDQIAANLVKN-GPLAVAINAVYMQTYIGGV--SCPYICSR-RLDHGVLLVGYGSA 322
           +    +Q  AN +K  GPLA  +NA  +Q Y  G+    P  C+  +L+H VL VGYG+ 
Sbjct: 150 ILSQNEQFQANKLKTIGPLASTLNARTLQFYRKGIMHPTPSACNPGQLNHAVLTVGYGTE 209

Query: 323 GYAPIRLKEKPYWIIKNSWGESWGEN 348
                  +  PYWI+KNSW   +GE 
Sbjct: 210 -------QGMPYWIVKNSWSRGFGEQ 228


>gi|291385469|ref|XP_002709277.1| PREDICTED: cathepsin F [Oryctolagus cuniculus]
          Length = 460

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/352 (42%), Positives = 196/352 (55%), Gaps = 41/352 (11%)

Query: 33  RQVTDGGDEILSHHESTNNDLLGAEHH------FSLFKKKFNKAYASQEEHDHRFTIFKA 86
           R+  D  + + S   + N D L  +        F  F + +N+ Y S+EE   R ++F +
Sbjct: 130 RRTEDRNETLKSTLPALNRDSLPQDFSVKMASIFKKFVRTYNRTYESKEEAQWRLSVFAS 189

Query: 87  NLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLG--LR----RKLRLPKDADQAPIL 139
           N+ RA + Q LD  +A +GIT+FSDLT  EFR  YL   LR    +K++L K  +     
Sbjct: 190 NMVRAQKIQSLDRGTAQYGITKFSDLTEEEFRTIYLNPLLRSEPGKKMQLAKPVE----- 244

Query: 140 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 199
             +  P  +DWR KGAV  VKDQG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DC
Sbjct: 245 --DPAPPQWDWRSKGAVTNVKDQGMCGSCWAFSVTGNVEGQWFLKRGTLLSLSEQELLDC 302

Query: 200 DHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAA 259
           D           D  C GGL ++A+      GGL  EEDY Y G     AC F   K   
Sbjct: 303 DK---------LDKACLGGLPSNAYSAIKNLGGLETEEDYTYQG--HMQACNFSAQKAKV 351

Query: 260 SVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRRL-DHGVLL 316
            + +   +S +E ++AA L K GP++VAINA  MQ Y  G++ P   +CS  L DH VLL
Sbjct: 352 YINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRRGIAHPLRPLCSPWLIDHAVLL 411

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           VGYG+           P+W IKNSWG  WGE GYY + RG  VCGV++M S+
Sbjct: 412 VGYGNRS-------ATPFWAIKNSWGADWGEEGYYYLYRGSGVCGVNTMASS 456


>gi|8468605|gb|AAF75546.1| cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  229 bits (584), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 168/314 (53%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVNVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC GGLMN+AF + ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFGWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E  YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 ENSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNSW   WGE+GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSWTAQWGEDGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|312282841|dbj|BAJ34286.1| unnamed protein product [Thellungiella halophila]
          Length = 358

 Score =  229 bits (583), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 148/377 (39%), Positives = 196/377 (51%), Gaps = 34/377 (9%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH- 59
           M  KT++  +V +++ +A ++  +  D    IR V+DG  EI    E +   +LG   H 
Sbjct: 1   MSVKTILPSVVLVILIAASAAADIGFDESNPIRMVSDGLREI----EESVVQILGQSRHV 56

Query: 60  --FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
             F+ F  ++ K Y + EE   RF+IFK NL       K   S   G+ QF+DLT  EF+
Sbjct: 57  LSFARFTHRYGKKYQNAEEIKLRFSIFKENLDLIRSTNKKRLSYKLGVNQFADLTWQEFQ 116

Query: 118 RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           R  LG  +             L    LP   DWRE G V PVKDQG CGSCW+FSTTGAL
Sbjct: 117 RNKLGAAQNCSATLKGSHK--LTEAALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGAL 174

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           E A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE
Sbjct: 175 EAAYHQAFGKGISLSEQQLVDCAGAFN-------NYGCNGGLPSQAFEYIKSNGGLDTEE 227

Query: 238 DYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-M 293
            YPYTG D    CK+    +   V    N ++ + DE + A  LV+  P+++A   V   
Sbjct: 228 AYPYTGKD--GTCKYSAENVGVQVLDSVNITLGAEDELKHAVGLVR--PVSIAFEVVKSF 283

Query: 294 QTYIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           + Y  GV     C      ++H VL VGYG            PYW+IKNSWG  WG+ GY
Sbjct: 284 RLYKSGVYTDSHCGNTPMDVNHAVLAVGYGIEDGV-------PYWLIKNSWGADWGDKGY 336

Query: 351 YKICRGRNVCGVDSMVS 367
           +K+  G+N+CG+ +  S
Sbjct: 337 FKMEMGKNMCGIATCAS 353


>gi|343471272|emb|CCD16264.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  228 bits (582), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 172/310 (55%), Gaps = 25/310 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK ++ RA      +P AT G+TQFSD++P E 
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSPEEL 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TYL G +      K   +   + T   P   DWR+KGAV PVKDQ  CGSCW+FS TG
Sbjct: 98  RATYLNGAKYYAAALKRPRKVVNVSTGKAPPAVDWRKKGAVTPVKDQRKCGSCWAFSATG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD+          D GC GGLM+ A ++ + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCDN---------MDDGCQGGLMDRALKWIVSSNKGNV 208

Query: 234 MREEDYPYTGTDRG-HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             EE YPY  TD     C      + A ++    +  DE+ IA  L KNGP+A+A++A  
Sbjct: 209 FTEESYPYDSTDGDVPPCNMSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDASS 268

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
              Y GGV  SC    S  L+H VLLVGY           + PYWIIKNSWG+ WGE GY
Sbjct: 269 FLDYKGGVLTSCS---SDALNHDVLLVGYDDTS-------KPPYWIIKNSWGKKWGEEGY 318

Query: 351 YKICRGRNVC 360
            ++ +G N C
Sbjct: 319 IRVEKGTNQC 328


>gi|158148921|dbj|BAF81994.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 359

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 142/370 (38%), Positives = 195/370 (52%), Gaps = 34/370 (9%)

Query: 8   LFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFK 64
             L+ +   +  S+G+   D + + + V+DG  E+    E++   ++G   H   F+ F 
Sbjct: 9   FLLILIACVAGASAGSSFADQNPIKQVVSDGLREL----EASVLQVIGQTRHSLAFARFA 64

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
            ++ K+Y + EE   RF+IF  +L+    H K   S T G+ +F+DLT  EFR+  LG  
Sbjct: 65  HRYGKSYETAEEMKRRFSIFVDSLKMIRSHNKKGLSYTLGVNEFADLTWEEFRKHRLGAA 124

Query: 125 RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
           +        +    L    LP   DWRE G V PVK+QG CGSCW+FSTTGALE A   A
Sbjct: 125 QNCSATLKGNHK--LTNGLLPLKKDWREVGIVTPVKNQGHCGSCWTFSTTGALEAAYVQA 182

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
            GK + LSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPYTG 
Sbjct: 183 FGKAIFLSEQQLVDCARAYN-------NFGCNGGLPSQAFEYIKANGGLDTEEAYPYTGV 235

Query: 245 DRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGV 300
           D    CKF    I   V    N ++ + DE + A   V+  P++VA   V   + Y  GV
Sbjct: 236 D--GVCKFSSENIGVQVLDSVNITLGAEDELKDAVAFVR--PVSVAFEVVSGFRLYKSGV 291

Query: 301 SCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR 357
                C      ++H V+ VGYG          + PYW+IKNSWG  WG+NGY+K+  G+
Sbjct: 292 YTSDTCGNTPMDVNHAVVAVGYGVE-------NDVPYWLIKNSWGADWGDNGYFKMEMGK 344

Query: 358 NVCGVDSMVS 367
           N+CGV +  S
Sbjct: 345 NMCGVATCAS 354


>gi|408009|gb|AAA18215.1| cysteine protease precursor [Trypanosoma congolense]
          Length = 444

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 129/316 (40%), Positives = 175/316 (55%), Gaps = 22/316 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG CGSCW+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGQCGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD           D GC GGLM+ AF++ + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCDTN---------DFGCEGGLMDDAFKWIVSSNKGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      C      + A + +   +  DE+ IA  L KNGP+A+A++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCDKSGKVVGAKIRDHVDLPEDENAIAEWLAKNGPVAIAVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q+Y GGV    I S  LDHGVLLVGY           + PYWIIKNSW + WGE GY  
Sbjct: 269 FQSYTGGVLTSCI-SEHLDHGVLLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYSA 320

Query: 353 ICRGRNVCGVDSMVST 368
           + R  N C + ++ S+
Sbjct: 321 L-RRHNQCLMKNLPSS 335


>gi|340381055|ref|XP_003389037.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 132/310 (42%), Positives = 181/310 (58%), Gaps = 17/310 (5%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSA-THGITQFSDLTPAEF 116
            + L+K+   K Y+S++E  +R TI++AN +    H    D    T  +  F+DL  +EF
Sbjct: 22  EWELWKRTNGKDYSSEKEELYRQTIWEANKKIVLEHNANADKWGWTLEMNAFADLESSEF 81

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
              Y G RR  R   +A +  +   N LP   DWR KGAV PVK+Q  CGSCW+FSTTG+
Sbjct: 82  AAMYNGYRRSAR-KSNATRYHVPTGNALPDTVDWRTKGAVTPVKNQKQCGSCWAFSTTGS 140

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LEG  FL  G L SLSEQQLVDC  +         + GC GGLM++AF+Y    GG+  E
Sbjct: 141 LEGQTFLKKGTLPSLSEQQLVDCSDKYG-------NHGCQGGLMDNAFKYIEANGGIDSE 193

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVY--M 293
             YPY    +   C+F +S +AA+   +  +  D+     + V N GP++VA++A +   
Sbjct: 194 ASYPYEA--KNGKCRFQQSAVAATCTGYKDIPHDDIDGLQDAVANVGPISVAMDASHSSF 251

Query: 294 QTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y  GV  P +CS  RLDHGVL VGYG+   + +  +EKPYW++KNSWG  WG+ GY+K
Sbjct: 252 QLYAAGVYDPLLCSSTRLDHGVLAVGYGTEP-SGLFHEEKPYWLVKNSWGPDWGQQGYFK 310

Query: 353 ICRGRNVCGV 362
           I R  N CG+
Sbjct: 311 IVRKDNKCGI 320


>gi|345783063|ref|XP_533219.3| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Canis lupus
           familiaris]
          Length = 490

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 144/320 (45%), Positives = 187/320 (58%), Gaps = 36/320 (11%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y ++EE + R ++F  N+ RA + Q LD  +A +GIT+FSDLT  EFR 
Sbjct: 192 FKEFVTTYNRTYETKEEAEWRMSVFSNNMVRAQKIQALDRGTAQYGITKFSDLTEEEFRT 251

Query: 119 TYLG--LR----RKLRLPKD-ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
            YL   LR    +K+RL K  +D AP       P ++DWR KGAV  VKDQG CGSCW+F
Sbjct: 252 IYLNPLLRENRGKKMRLAKSISDHAP-------PPEWDWRSKGAVTKVKDQGMCGSCWAF 304

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+   +  G
Sbjct: 305 SVTGNVEGQWFLKEGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYSAIMTLG 355

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  E+DY Y G     AC F   K    + +   +S +E ++AA L K GP++VAINA 
Sbjct: 356 GLETEDDYSYQG--HLQACSFSAKKARVYINDSMELSQNEQKLAAWLAKKGPISVAINAF 413

Query: 292 YMQTYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            MQ Y  G+S P   +CS  L DH VLLVGYG+           P+W IKNSWG  WGE 
Sbjct: 414 GMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRSGI-------PFWAIKNSWGTDWGEE 466

Query: 349 GYYKICRGRNVCGVDSMVST 368
           GYY + RG   CGV++M S+
Sbjct: 467 GYYYLHRGSGACGVNTMASS 486


>gi|8468607|gb|AAF75547.1| cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  228 bits (581), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 168/314 (53%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EF  
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFWS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVNVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCGGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E  YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EGSYPYASGEGISPPCTTSGHTVGATITGHVEIPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYW+IKNSW   WGE GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWVIKNSWTTHWGEGGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V   VS+
Sbjct: 320 KGSNQCLVKEGVSS 333


>gi|62526575|gb|AAX84673.1| cysteine protease CP1 [Manihot esculenta]
          Length = 467

 Score =  228 bits (581), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 138/365 (37%), Positives = 192/365 (52%), Gaps = 40/365 (10%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKK 66
           VL  +S  + SA     +  D     +      DE+++ +E               +  K
Sbjct: 13  VLLFLSFTLSSASDMSIISYDQTHATKSSWRTDDEVMAIYEE--------------WLVK 58

Query: 67  FNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR-- 124
             K Y +  E + RF +FK NLR    H   + +   G+  F+DLT  E+R TYLG R  
Sbjct: 59  QGKVYNALGEREKRFQVFKDNLRFIDEHNSENRTYKLGLNGFADLTNEEYRSTYLGARGG 118

Query: 125 -RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
            ++ RL K +D+        LP   DWR++GAV  VKDQGSCGSCW+FST  A+EG N +
Sbjct: 119 MKRNRLRKTSDRYAPRVGESLPDSVDWRKEGAVAEVKDQGSCGSCWAFSTIAAVEGINKI 178

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
            TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  EEDYPY  
Sbjct: 179 VTGDLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGGIDTEEDYPYLA 230

Query: 244 TDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVS 301
            D G    + K+    ++ ++  V ++ +      V N P++VAI A     Q Y  G+ 
Sbjct: 231 RD-GRCDTYRKNAKVVTIDDYEDVPVNSETALQKAVANQPVSVAIEAGGRDFQFYASGIF 289

Query: 302 CPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRN--- 358
               C  +LDHGV  VGYG+          K YWI++NSWG+SWGENGY ++ R  N   
Sbjct: 290 SGR-CGTQLDHGVAAVGYGTE-------NGKDYWIVRNSWGKSWGENGYLRMARSINSPT 341

Query: 359 -VCGV 362
            +CG+
Sbjct: 342 GICGI 346


>gi|229893789|gb|ACQ90252.1| cathepsin L [Pinctada fucata]
          Length = 362

 Score =  228 bits (580), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 144/326 (44%), Positives = 180/326 (55%), Gaps = 28/326 (8%)

Query: 54  LGAEHH-FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQF 108
           LG  H  +  FK  F K Y + EE   RF IF+  L R   H +       S   G+ QF
Sbjct: 47  LGPYHETWKEFKTLFGKVYDTVEEEIKRFDIFRDTLERIEEHNRKYHMGQKSYYMGVNQF 106

Query: 109 SDLTPAEFRRTYLGLRRKLRLPKDAD--QAPILPTNDLPADFDWREKGAVGPVKDQGSCG 166
           SD++  E+ R + GLRR  R     +   +       L    DWR+KG V PVK+QG CG
Sbjct: 107 SDMSHDEYLR-HNGLRRGNRKYSKGEGCDSYTKSGKQLDDKVDWRDKGYVTPVKNQGQCG 165

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCWSFSTTG+LEG +F  TGKL+SLSEQQLVDC      E       GCNGGLM++AFEY
Sbjct: 166 SCWSFSTTGSLEGQHFRQTGKLISLSEQQLVDCSGTFGNE-------GCNGGLMDNAFEY 218

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLA 285
               GGL  E+DYPYT   +   C   KS   A+    + V S DED +   L   GP++
Sbjct: 219 IKSIGGLEGEDDYPYTA--KQGKCHLKKSLFKANDTGCTDVESGDEDALKDALASVGPIS 276

Query: 286 VAINAVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           VAI+A +   Q+Y GGV     C S+ LDHGVL VGYG+            YW++KNSWG
Sbjct: 277 VAIDASHASFQSYDGGVYDEEECSSQNLDHGVLTVGYGTEENGG------DYWLVKNSWG 330

Query: 343 ESWGENGYYKICRGR-NVCGVDSMVS 367
           E WGE GY K+ R + N CG+ +  S
Sbjct: 331 EMWGEEGYIKMSRNKDNQCGIATQAS 356


>gi|225428879|ref|XP_002285299.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 469

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/312 (42%), Positives = 179/312 (57%), Gaps = 27/312 (8%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLG--- 122
           K  K+Y +  E + RF IFK NLR    H  ++ +   G+ +F+DLT  E+R  YLG   
Sbjct: 60  KHGKSYNALGERERRFEIFKDNLRFIEEHNAVNRTYKVGLNRFADLTNEEYRSRYLGRRD 119

Query: 123 -LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
             RR LR  + +D+       DLP   DWREKGAV PVKDQG+CGSCW+FST  A+EG N
Sbjct: 120 ETRRGLRASRVSDRYSFRAGEDLPESVDWREKGAVVPVKDQGNCGSCWAFSTIAAVEGIN 179

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
            +ATG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  EEDYPY
Sbjct: 180 QIATGDLISLSEQELVDCDK--------SYNQGCNGGLMDYAFEFIINNGGIDSEEDYPY 231

Query: 242 TGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIG 298
              D    C  + K+    S+  +  V  ++++     V N P++VAI A     Q Y  
Sbjct: 232 RAAD--TTCDPNRKNARVVSIDGYEDVPQNDERSLKKAVANQPVSVAIEAGGRAFQLYQS 289

Query: 299 GVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRN 358
           GV     C  +LDHGV+ VGYG+            YWI++NSWG +WGE+GY K+   RN
Sbjct: 290 GVFTGQ-CGTQLDHGVVAVGYGTENSV-------DYWIVRNSWGPNWGESGYIKL--ERN 339

Query: 359 VCGVDSMVSTVA 370
           + G ++    +A
Sbjct: 340 LAGTETGKCGIA 351


>gi|168058022|ref|XP_001781010.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667567|gb|EDQ54194.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 457

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 139/344 (40%), Positives = 193/344 (56%), Gaps = 37/344 (10%)

Query: 35  VTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH 94
           V   GD I    +   + LL  +  F+ +  K  K Y++ EE  HRF ++K NL    RH
Sbjct: 22  VVANGDVIRMPTDVGKDQLLAGQ--FAAWAHKHGKVYSAAEERAHRFLVWKDNLEYIQRH 79

Query: 95  QKLDPSATHGITQFSDLTPAEFRRTYLGLR----RKLRLPKDADQAPILPTNDLPADFDW 150
            + + S   G+T+F+DLT  EFRR Y G R    R+L+  ++A  +     ++ P   DW
Sbjct: 80  SEKNLSYWLGLTKFADLTNEEFRRQYTGTRIDRSRRLKKGRNATGSFRYANSEAPKSIDW 139

Query: 151 REKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGS 210
           REKGAV  VKDQGSCGSCW+FS  G++EG N + TG  +SLS Q+LVDCD +        
Sbjct: 140 REKGAVTSVKDQGSCGSCWAFSAVGSVEGINAIRTGDAISLSVQELVDCDKK-------- 191

Query: 211 CDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVA---NFSVV 267
            + GCNGGLM+ AF++ ++ GG+  E+DYPY G D     + D +K+ A V    ++  V
Sbjct: 192 YNQGCNGGLMDYAFDFVIQNGGIDTEKDYPYQGYDG----RCDVNKMNARVVTIDSYEDV 247

Query: 268 SLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
             ++++     V   P++VAI A     Q Y GGV     C   LDHGVL VGYGS    
Sbjct: 248 PENDEEALKKAVAGQPVSVAIEAGGRDFQLYSGGVFTGR-CGTDLDHGVLAVGYGSE--- 303

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICR------GRNVCGVD 363
               K   YWI+KNSWGE WGE+GY ++ R      G  +CG++
Sbjct: 304 ----KGLDYWIVKNSWGEYWGESGYLRMQRNLKDDNGYGLCGIN 343


>gi|18141289|gb|AAL60582.1|AF454960_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 359

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 145/377 (38%), Positives = 198/377 (52%), Gaps = 34/377 (9%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH- 59
           M  +T++   V L++ +A ++ ++  D    IR V+D   E+    E +   +LG   H 
Sbjct: 2   MSVRTILPSAVLLILIAASTAESIGFDESNPIRMVSDRLREV----EESVVQILGQSRHV 57

Query: 60  --FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
             F+ F  ++ K Y + EE   RF+IFK NL       K   S   G+ QF+D+T  EF+
Sbjct: 58  ISFARFAHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFADMTWQEFQ 117

Query: 118 RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           RT LG  +             L    LP   DWRE G V PVKDQG CGSCW+FSTTGAL
Sbjct: 118 RTKLGAAQNCSATLKGTHK--LTGEALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGAL 175

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           E A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE
Sbjct: 176 EAAYHQAFGKGISLSEQQLVDCAGAFN-------NYGCNGGLPSQAFEYIKSNGGLDTEE 228

Query: 238 DYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-M 293
            YPYTG D    CK+    +   V    N ++ + DE + A  LV+  P+++A   ++  
Sbjct: 229 AYPYTGED--GTCKYSAENVGVEVLDSVNITLGAEDELKHAVGLVR--PVSIAFEVIHSF 284

Query: 294 QTYIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           + Y  GV     C +    ++H VL VGYG            PYW+IKNSWG  WG+ GY
Sbjct: 285 RLYKSGVYSDSHCGQTPMDVNHAVLAVGYGIE-------DGVPYWLIKNSWGADWGDKGY 337

Query: 351 YKICRGRNVCGVDSMVS 367
           +K+  G+N+CG+ +  S
Sbjct: 338 FKMEMGKNMCGIATCAS 354


>gi|335281454|ref|XP_003122543.2| PREDICTED: cathepsin F [Sus scrofa]
 gi|350579927|ref|XP_003480717.1| PREDICTED: cathepsin F-like [Sus scrofa]
          Length = 490

 Score =  228 bits (580), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 142/322 (44%), Positives = 183/322 (56%), Gaps = 39/322 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y ++EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 193 FKEFVTTYNRTYDTKEEARWRMSVFANNMVRAQKIQALDTGTARYGVTKFSDLTEEEFRT 252

Query: 119 TYLGLR------RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            YL         RK+RL K     P       P ++DWR+KGAV  VKDQG CGSCW+FS
Sbjct: 253 IYLNPLLQEEPGRKMRLAKSVSSLP-------PPEWDWRKKGAVTKVKDQGMCGSCWAFS 305

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG +EG  FL  G L+SLSEQ+L+DCD           D GC GGL ++A+      GG
Sbjct: 306 VTGNVEGQWFLKQGTLLSLSEQELLDCDK---------VDKGCMGGLPSNAYSAIKTLGG 356

Query: 233 LMREEDYPYTGTDRGH--ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           L  EEDY Y    RGH   C F+  K    + +   +S +E ++AA L + GP++VAINA
Sbjct: 357 LETEEDYSY----RGHLQTCSFNAEKAKVYINDSVELSQNEQKLAAWLAEKGPISVAINA 412

Query: 291 VYMQTYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
             MQ Y  G+S P   +CS  L DH VLLVGYG+           P+W IKNSWG  WGE
Sbjct: 413 FGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRS-------ATPFWAIKNSWGTDWGE 465

Query: 348 NGYYKICRGRNVCGVDSMVSTV 369
            GYY + RG   CGV+ M S+ 
Sbjct: 466 EGYYYLYRGSGACGVNIMASSA 487


>gi|72008176|ref|XP_780713.1| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 335

 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 182/323 (56%), Gaps = 28/323 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDP---SATHGITQFSDLT 112
           +  ++ +K +  K Y S EE   R  I++ NL    +H  K D    +   G+ QF+DL 
Sbjct: 25  DEDWNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGHFTYALGMNQFADLK 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCW 169
             EF     G R      K A  +  LP+N   +LP   DWR KG V PVKDQG CGSCW
Sbjct: 85  NEEFVAMMTGFRVN-GTSKAAKGSTFLPSNNIGELPKTVDWRTKGYVTPVKDQGQCGSCW 143

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FSTTG+LEG +F ATGKLVSLSEQ LVDC  +   E       GC+GGLM+ AF+Y +K
Sbjct: 144 AFSTTGSLEGQHFKATGKLVSLSEQNLVDCSGKEGNE-------GCDGGLMDQAFQYIIK 196

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAI 288
           AGG+  EE YPY   D    C F K+ I A+V  ++ V+ D +      V + GP++VAI
Sbjct: 197 AGGIDTEESYPYKAVDG--ECHFKKANIGATVTGYTDVTSDSETALQKAVAHIGPISVAI 254

Query: 289 NAVYM--QTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           +A +M  Q Y  GV + P   S  LDHGVL VGYG+            YWI+KNSW E+W
Sbjct: 255 DASHMSFQLYKSGVYNEPDCSSTLLDHGVLAVGYGTTSDGT------DYWIVKNSWAETW 308

Query: 346 GENGYYKICRGR-NVCGVDSMVS 367
           G NGY  + R + N CG+ +  S
Sbjct: 309 GMNGYLWMSRNKDNQCGIATQAS 331


>gi|18407961|ref|NP_566880.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
 gi|73622182|sp|Q8RWQ9.1|ALEUL_ARATH RecName: Full=Thiol protease aleurain-like; Flags: Precursor
 gi|20147207|gb|AAM10319.1| AT3g45310/F18N11_70 [Arabidopsis thaliana]
 gi|332644500|gb|AEE78021.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
          Length = 358

 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 147/362 (40%), Positives = 191/362 (52%), Gaps = 34/362 (9%)

Query: 11  VSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKF 67
           + L++F+A +S  +  D    I+ V+D   E+    E T   +LG   H   FS F  ++
Sbjct: 11  ILLILFAAAASKEIGFDESNPIKMVSDNLHEL----EDTVVQILGQSRHVLSFSRFTHRY 66

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
            K Y S EE   RF++FK NL       K   S    + QF+DLT  EF+R  LG  +  
Sbjct: 67  GKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAAQNC 126

Query: 128 RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
                        T  +P   DWRE G V PVK+QG CGSCW+FSTTGALE A   A GK
Sbjct: 127 SATLKGSHKITEAT--VPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGK 184

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
            +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG D G
Sbjct: 185 GISLSEQQLVDCAGTFN-------NFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG 237

Query: 248 HACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCP 303
             CKF    I   V    N ++ + DE + A  LV+  P++VA   V+  + Y  GV   
Sbjct: 238 --CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGVFTS 293

Query: 304 YICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
             C      ++H VL VGYG          + PYW+IKNSWG  WG+NGY+K+  G+N+C
Sbjct: 294 NTCGNTPMDVNHAVLAVGYGVE-------DDVPYWLIKNSWGGEWGDNGYFKMEMGKNMC 346

Query: 361 GV 362
           GV
Sbjct: 347 GV 348


>gi|146335580|gb|ABQ23399.1| cathepsin L isotype 2 [Trypanoplasma borreli]
          Length = 443

 Score =  227 bits (579), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 186/321 (57%), Gaps = 31/321 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR-R 118
           FS FK    + Y S  E   RF IF AN+++AA   + +P AT G  +F+D++  EF+ R
Sbjct: 25  FSDFKATHARNYVSPGEERKRFEIFAANMKKAAELNRKNPMATFGPNEFADMSSEEFQTR 84

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPA----DFDWREKGAVGPVKDQGSCGSCWSFSTT 174
                       + A         ++ A      DWR KGAV  VK+QGSCGSCWSFSTT
Sbjct: 85  HNAARHYAAAKARRAKHTKSFTKEEIKAADGQKIDWRLKGAVTSVKNQGSCGSCWSFSTT 144

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGG 232
           G +EG N +ATG LVSLSEQ+LV CD         + D+GCNGGLM++AF + +  + G 
Sbjct: 145 GNIEGQNAIATGNLVSLSEQELVSCD---------TTDNGCNGGLMDNAFGWLISTRGGQ 195

Query: 233 LMREEDYPY-TGTDRGHACKF--DKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
           +  E  YPY +G     AC +  D   + A+++NF  ++  E+ +AA +   GPL++ ++
Sbjct: 196 IATEASYPYVSGNGIVPACSYNLDNKPVGATISNFQDITGTEEDMAAFVFNYGPLSIGVD 255

Query: 290 AVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
           A   Q+Y GG+   CP +   ++DHGVL+VGY     AP      PYWIIKNSW  +WGE
Sbjct: 256 ASTWQSYAGGIITYCPDV---QIDHGVLIVGYDDT--AP-----TPYWIIKNSWTANWGE 305

Query: 348 NGYYKICRGRNVCGVDSMVST 368
           +GY ++ +G N+CG+ S  S+
Sbjct: 306 DGYIRVAKGSNMCGLTSTPSS 326


>gi|358339045|dbj|GAA32724.2| cathepsin F, partial [Clonorchis sinensis]
          Length = 271

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 129/289 (44%), Positives = 168/289 (58%), Gaps = 29/289 (10%)

Query: 87  NLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
            L  A R Q+++  +A +G+TQFSDLT  EF+  YL    ++R         + P  D+ 
Sbjct: 1   QLAAAKRLQEMEQGTAQYGVTQFSDLTSEEFKTRYL----RMRFDGPIVSEDLTPEEDVT 56

Query: 146 AD---FDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 202
            D   FDWRE GAVGPV DQG CGSCW+FS  G +EG  F  TG L++LSEQQLVDCDH 
Sbjct: 57  MDNEKFDWREHGAVGPVLDQGKCGSCWAFSVIGNVEGQWFRKTGDLLALSEQQLVDCDH- 115

Query: 203 CDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVA 262
                    D GCNGG     +    K GGL    DYPYTG D    C  ++SK  A V 
Sbjct: 116 --------LDKGCNGGYPPKTYGEIEKMGGLELASDYPYTGVD--GICYMNQSKFVAYVN 165

Query: 263 NFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRR-LDHGVLLVGY 319
           + +V+ L E   A  L + GPL+ A+NAV +Q Y+GG+    P++C+   L+H VL VGY
Sbjct: 166 DSTVLPLSEKIQAQKLKEIGPLSSALNAVLLQFYLGGIIFPIPFLCNPHGLNHAVLTVGY 225

Query: 320 GSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           G+           PYWI+KNSWG  +GE GY++I RG   CG++ +VST
Sbjct: 226 GTE-------FGIPYWIVKNSWGVGFGEKGYFRIFRGAGTCGINLVVST 267


>gi|30141019|dbj|BAC75923.1| cysteine protease-1 [Helianthus annuus]
          Length = 461

 Score =  227 bits (578), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 131/296 (44%), Positives = 172/296 (58%), Gaps = 23/296 (7%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           K  K Y +  E D RF IFK NLR    H   D +   G+ +F+DLT  E+R TY G++ 
Sbjct: 58  KHGKTYNALGEKDRRFQIFKDNLRFIDEHNSGDHTYKLGLNKFADLTNEEYRMTYTGIKT 117

Query: 126 ---KLRLPK-DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
              K +L K  +D+      + LP   DWRE+GAV  VKDQGSCGSCW+FSTTG++EG N
Sbjct: 118 IDDKKKLSKMKSDRYAYRSGDSLPEYVDWREQGAVTDVKDQGSCGSCWAFSTTGSVEGVN 177

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
            + TG L+S+SEQ+LV+CD         S + GCNGGLM+ AFE+ +K GG+  EEDYPY
Sbjct: 178 KIVTGDLISVSEQELVNCDT--------SYNQGCNGGLMDYAFEFIIKNGGIDTEEDYPY 229

Query: 242 TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGG 299
           TG D G   K  K+    ++ ++  V ++++      V N P+AVAI A     Q Y  G
Sbjct: 230 TGKD-GKCDKNKKNAKVVTIDSYEDVPVNDESSLKKAVSNQPVAVAIEAGGRDFQFYTSG 288

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           +     C   LDHGVL  GYG+          K YW++KNSWG  WGE GY K+ R
Sbjct: 289 IFTG-SCGTALDHGVLAAGYGTE-------DGKDYWLVKNSWGAEWGEGGYLKMER 336


>gi|281204396|gb|EFA78592.1| cysteine proteinase 3 [Polysphondylium pallidum PN500]
          Length = 330

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 140/330 (42%), Positives = 188/330 (56%), Gaps = 33/330 (10%)

Query: 51  NDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ 107
           N L   +H+   F+ +  + ++AY   E  D R+  FK NL    +      S   G+  
Sbjct: 17  NRLFSEQHYQNQFTNWMVRLDRAYDVFEFQD-RYNAFKNNLDLIHKWNSQGHSTVLGVNH 75

Query: 108 FSDLTPAEFRRTYLGLRRKL-RLPKDADQAPILPTNDL----PADFDWREKGAVGPVKDQ 162
            +DL+  E+R  YLG++    RLP+   QA  +  N +     A  DWR  GAVG VKDQ
Sbjct: 76  LADLSNEEYRNLYLGVKVDASRLPQ---QAASIKLNKVFAPVAASLDWRSSGAVGRVKDQ 132

Query: 163 GSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNS 222
           G CGSCWSFSTTG++EGAN +ATG   SLSEQQL+DC  +   E       GCNGGLM++
Sbjct: 133 GQCGSCWSFSTTGSIEGANQIATGNFASLSEQQLMDCSRDYGNE-------GCNGGLMDA 185

Query: 223 AFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKN 281
           A +Y +  GGL  EE YPYT +D  + CKF+ + I A ++++  V    E  +AA L K 
Sbjct: 186 AMKYVIAQGGLDTEESYPYTMSDS-YTCKFNPANIGAKISSYIDVQRGSETDLAAKLNK- 243

Query: 282 GPLAVAINAVY--MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIK 338
           GP++VAI+A +   Q Y  GV     CS   LDHGVL VGYG+ G          YWI+K
Sbjct: 244 GPVSVAIDASHSSFQLYKSGVYYEPACSSYNLDHGVLAVGYGTEG-------SSNYWIVK 296

Query: 339 NSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           NSWG +WG +GY  + + + N CG+ SM S
Sbjct: 297 NSWGPNWGLSGYIWMAKDKSNHCGISSMAS 326


>gi|146216004|gb|ABQ10204.1| cysteine protease Cp6 [Actinidia deliciosa]
          Length = 461

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 132/302 (43%), Positives = 171/302 (56%), Gaps = 23/302 (7%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR- 124
           K  K+Y +  E + RF IFK NLR    H     +   G+ +F+DLT  E+R  YLG R 
Sbjct: 52  KHGKSYNAIGEKEKRFQIFKDNLRFIDEHNAESRTYKVGLNRFADLTNDEYRSMYLGART 111

Query: 125 ---RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
              R+L   K +D+   +    LP   DWREKGAV  VKDQGSCGSCW+FST  A+EG N
Sbjct: 112 GSRRRLSTQKRSDRYVPVAGESLPDSVDWREKGAVVGVKDQGSCGSCWAFSTIAAVEGIN 171

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
            + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  EEDYPY
Sbjct: 172 QIVTGDLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTEEDYPY 223

Query: 242 TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM--QTYIGG 299
              D G   ++ K+    ++ ++  V ++ +Q     V N P++VAI A  M  Q Y  G
Sbjct: 224 NARD-GRCDQYRKNAKVVTIDDYEDVPVNNEQALQKAVANQPVSVAIEASGMAFQFYESG 282

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV 359
           V     C   LDHGV  VGYG+            YWI+KNSWG SWGE+GY ++ R    
Sbjct: 283 VFTGN-CGTALDHGVTAVGYGTE-------NSVDYWIVKNSWGSSWGESGYIRMERNTGA 334

Query: 360 CG 361
            G
Sbjct: 335 TG 336


>gi|118350314|ref|XP_001008438.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89290205|gb|EAR88193.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 389

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/355 (38%), Positives = 190/355 (53%), Gaps = 42/355 (11%)

Query: 45  HHESTNN-DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAAR-HQKLDPSAT 102
           H+ ST   +L   +  FS FK +  K Y   EE   RF IF+ NL   +  +Q  + +A 
Sbjct: 24  HYNSTKQLNLTQVKQLFSKFKAEHKKFYNFLEEQ-RRFEIFRQNLDIISELNQVEEGTAE 82

Query: 103 HGITQFSDLTPAEFRRTYL---GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPV 159
           +GITQFSD+T  EF+   L      R     +      I  + D P  +DWR+ GAV PV
Sbjct: 83  YGITQFSDMTTEEFKSQILIPSTYARNFTGSRYHGFQKI--SQDAPTSYDWRDHGAVTPV 140

Query: 160 KDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           K+QG+ G+CW+FSTTG +EG  FLA   LVSLSE+Q+VDCD   +P   G  D G  GG 
Sbjct: 141 KNQGTVGTCWTFSTTGNIEGQWFLAGNPLVSLSEEQIVDCDGSQEPST-GHADCGVFGGW 199

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRG-------------------------HACKFDK 254
              AF+Y + AGGL  EE YPY   + G                         + C+  +
Sbjct: 200 PYLAFDYVINAGGLPSEETYPYCVGNGGCYPCPAPGYNETLCGPAVPYCNATAYPCRQGQ 259

Query: 255 SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSR-RLDHG 313
             IAA + ++  +S DED I   L + GPL+VA++A Y+Q Y  G+S P  CS+  L+H 
Sbjct: 260 VPIAAKIEDWKALSKDEDSIKQQLFEIGPLSVALDASYLQFYKKGISAPKFCSKTTLNHA 319

Query: 314 VLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           VLL GYG             +W +KNSWG  WGE GY+++ RG  +CG+++ V+T
Sbjct: 320 VLLTGYGIDNGV-------EFWNVKNSWGAKWGEQGYFRLKRGVGMCGINTQVAT 367


>gi|56553473|gb|AAV97878.1| recombinant cysteine protease [Cloning vector pQ-CPB]
          Length = 335

 Score =  226 bits (577), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/312 (42%), Positives = 172/312 (55%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + + YA+ +E   R   F+ NL     HQ  +P A  GIT+F DL+  EF   
Sbjct: 30  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 89

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G     +  K A Q       DL   PA  DWREKGAV PVKDQG CGSCW+FS  G
Sbjct: 90  YLSGATHFAKAKKFASQYYRKVGADLSTAPAAVDWREKGAVTPVKDQGMCGSCWAFSAIG 149

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGGL 233
            +E   +LAT  L+SLSEQ+LV CD           D GCNGGLM  AF++ L  + G +
Sbjct: 150 NIESKWYLATHSLISLSEQELVSCD---------DVDEGCNGGLMGQAFDWLLNNRNGAV 200

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
                YPY  +  G   +  +S    I A +     +  +ED +AA L  NGP+A+A++A
Sbjct: 201 YTGASYPYV-SGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAIAVDA 259

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y GGV  SC     ++L+HGVLLVGY   G       E PYW+IKNSWGE+WGE 
Sbjct: 260 SAFMSYTGGVLTSCD---GKQLNHGVLLVGYNMTG-------EVPYWVIKNSWGENWGEK 309

Query: 349 GYYKICRGRNVC 360
           GY ++ +G N C
Sbjct: 310 GYVRVRKGTNEC 321


>gi|300175452|emb|CBK20763.2| unnamed protein product [Blastocystis hominis]
          Length = 313

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 174/321 (54%), Gaps = 35/321 (10%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTP 113
           L  E+ F+ F+ ++ K Y +  E   R  +F  N+  A +    D   T G T F+D+T 
Sbjct: 17  LRYENTFNSFEARYGKNYINAAERAFRQKVFAYNMEWAQKINSEDHPYTVGATPFADMTN 76

Query: 114 AEFRRTYL-GLRRKLRLPKDADQAPILPTNDLPAD-FDWREKGAVGPVKDQGSCGSCWSF 171
            EF  + L G   K ++ K     P  P  +  A+  DWREKGAV PVK+Q SCGSCW+F
Sbjct: 77  TEFAVSKLCGCMLKPKMTK-----PATPIMEPAAEAVDWREKGAVTPVKNQASCGSCWAF 131

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S TGA+EG NF+A G+L+SLSEQQLVDCDH+          SGC GGLM  AFEY  K  
Sbjct: 132 SATGAMEGRNFVANGELISLSEQQLVDCDHQ---------SSGCGGGLMTYAFEYA-KKK 181

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA- 290
           G+ +EEDYPY   D    CK DK         +  V   +       V  GP++VA+ A 
Sbjct: 182 GMCKEEDYPYHAVDED--CKDDKCTPVVFPKGYEEVPRFDGAALKQAVSQGPVSVAVEAD 239

Query: 291 -VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
            +  Q Y GGV     C   L+HGVL VGYG+            YWI+KNSWGESWG+ G
Sbjct: 240 SIVFQMYTGGVIDSSACGTSLNHGVLAVGYGA-----------DYWIVKNSWGESWGDKG 288

Query: 350 YYKIC---RGRNVCGVDSMVS 367
           Y KI     G  +CG++ M S
Sbjct: 289 YLKIKYTESGAGICGINQMNS 309


>gi|11464866|gb|AAG35358.1|AF314930_1 cruzipain [Trypanosoma cruzi]
          Length = 467

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 169/314 (53%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAAEEAFRLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 97  RYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           DSGC+GGLMN+AFE+ ++   G +  
Sbjct: 157 ECQWFLAGHPLTNLSEQMLVSCDKT---------DSGCSGGLMNNAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA L  NGP+AVA++A    
Sbjct: 208 EDSYPYASGEGISPPCTTSGHTVGATITGHVGLPQDEAQIAAWLAVNGPVAVAVDASSWM 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNS    WGE GY +I 
Sbjct: 268 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSRTTQWGEEGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 320 KGSNQCLVKEEASS 333


>gi|146335578|gb|ABQ23398.1| cathepsin L isotype 1 [Trypanoplasma borreli]
          Length = 443

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 186/321 (57%), Gaps = 31/321 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR-R 118
           FS FK    + Y S  E   RF IF AN+++AA   + +P AT G  +F+D++  EF+ R
Sbjct: 25  FSDFKATHARNYVSPGEERKRFEIFAANMKKAAELNRKNPMATFGPNEFADMSSEEFQTR 84

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPA----DFDWREKGAVGPVKDQGSCGSCWSFSTT 174
                       + A         ++ A      DWR KGAV  VK+QGSCGSCWSFSTT
Sbjct: 85  HNAARHYAAAKARRAKHTKSFTKEEIKAADGQKIDWRLKGAVTSVKNQGSCGSCWSFSTT 144

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGG 232
           G +EG N +ATG LVSLSEQ+LV CD         + D+GCNGGLM++AF + +  + G 
Sbjct: 145 GNIEGQNAIATGNLVSLSEQELVSCD---------TTDNGCNGGLMDNAFGWLISTRGGQ 195

Query: 233 LMREEDYPY-TGTDRGHACKF--DKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
           +  E  YPY +G     AC +  D   + A+++NF  ++  E+ +AA +   GPL++ ++
Sbjct: 196 IATEASYPYVSGNGIVPACSYNLDNKPVGATISNFQDITGTEEDMAAFVFNYGPLSIGVD 255

Query: 290 AVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
           A   Q+Y GG+   CP +   ++DHGVL+VGY     AP      PYWIIKNSW  +WGE
Sbjct: 256 ASTWQSYAGGIITYCPDV---QIDHGVLIVGYDDT--AP-----TPYWIIKNSWTANWGE 305

Query: 348 NGYYKICRGRNVCGVDSMVST 368
           +GY ++ +G N+CG+ S  S+
Sbjct: 306 DGYIRVAKGSNMCGLTSTPSS 326


>gi|168006315|ref|XP_001755855.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693174|gb|EDQ79528.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 454

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/327 (41%), Positives = 177/327 (54%), Gaps = 31/327 (9%)

Query: 31  LIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRR 90
           L+R  TD G+E L                F  +  K  K Y+S EEH HR+ ++K NL  
Sbjct: 29  LLRMTTDLGNERL------------LSEQFGAWAHKHGKVYSSLEEHAHRYMVWKDNLEY 76

Query: 91  AARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDW 150
             RH + + S   G+T+F+D+T  EFRR Y G R                 ++ P   DW
Sbjct: 77  IQRHSEKNRSYWLGLTKFADITNDEFRRQYTGTRIDRSKRSKRKTGFRYADSEAPESVDW 136

Query: 151 REKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGS 210
           R+KGAV  VKDQGSCGSCW+FS  G++EG N + TG+ VSLSEQ+LVDCD E        
Sbjct: 137 RKKGAVTTVKDQGSCGSCWAFSAIGSVEGINAIRTGEAVSLSEQELVDCDLE-------- 188

Query: 211 CDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLD 270
            + GCNGGLM+ AF++ L+ GG+  E DYPY G D G      K+    ++  +  V  +
Sbjct: 189 YNQGCNGGLMDYAFDFILENGGIDTENDYPYKGLD-GRCDNNKKNAHVVTIDGYEDVPEN 247

Query: 271 EDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIR 328
           +++     V   P++VAI A     Q Y GGV     C   LDHGVL VGYGS G     
Sbjct: 248 DEEALKKAVAGQPVSVAIEAGGRDFQLYSGGVFTGE-CGTDLDHGVLAVGYGSEG----- 301

Query: 329 LKEKPYWIIKNSWGESWGENGYYKICR 355
                YWI+KNSWGE WGE+GY ++ R
Sbjct: 302 --SLDYWIVKNSWGEYWGESGYLRMQR 326


>gi|146215996|gb|ABQ10200.1| cysteine protease Cp2 [Actinidia deliciosa]
          Length = 376

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/314 (41%), Positives = 181/314 (57%), Gaps = 27/314 (8%)

Query: 49  TNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQF 108
           T+ +++G    ++ +  K  KAY    E + RF IFK NL+    H   + S   G+ +F
Sbjct: 39  TDEEVMGI---YAEWLAKHGKAYNGIGERERRFEIFKDNLKFVDEHNSENRSYKVGLNRF 95

Query: 109 SDLTPAEFRRTYLGLR----RKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQG 163
           +DLT  E+R  +LG +    R+    K A +   +  +D LP   DWRE GAV P+KDQG
Sbjct: 96  ADLTNEEYRSMFLGTKTDSKRRFMKSKSASRRYAVQDSDMLPESVDWRESGAVAPIKDQG 155

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
           SCGSCW+FST  A+EG N +ATG+++ LSEQ+LVDCD         + D+GCNGGLM+ A
Sbjct: 156 SCGSCWAFSTVAAVEGVNQIATGEMIQLSEQELVDCDR--------TYDAGCNGGLMDYA 207

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGP 283
           FE+ +  GG+  EEDYPY G D G      K+    S+ ++  V   ++      V + P
Sbjct: 208 FEFIINNGGIDTEEDYPYRGVD-GTCDPERKNTKVVSINDYEDVPPYDEMALKKAVAHQP 266

Query: 284 LAVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           ++VAI A     Q Y+ GV     C R LDHGV++VGYG+   A        +WI++NSW
Sbjct: 267 VSVAIEASGRAFQLYLSGVFTGE-CGRALDHGVVVVGYGTDNGA-------DHWIVRNSW 318

Query: 342 GESWGENGYYKICR 355
           G SWGENGY ++ R
Sbjct: 319 GTSWGENGYIRMER 332


>gi|154183745|gb|ABS70713.1| cathepsin L-like cysteine proteinase [Dermacentor variabilis]
          Length = 333

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 139/320 (43%), Positives = 174/320 (54%), Gaps = 27/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLTPA 114
            +  FK    K+Y S  E   RF IF  N    ARH +       S   G+ QF DL P 
Sbjct: 26  QWEAFKATHKKSYQSNMEELLRFKIFSENSLLVARHNEKYARGLVSYKLGMNQFGDLLPH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF R + G R      + +   P    N   LP   DWREKGAV PVK+QG CGSCW+FS
Sbjct: 86  EFARMFNGYRGARTAGRGSTFLPPANVNYSSLPQSMDWREKGAVTPVKNQGQCGSCWAFS 145

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTG+LEG +FL TG LVSLSEQ LVDC      E  G  + GC GGLM++AF+Y    GG
Sbjct: 146 TTGSLEGQHFLKTGVLVSLSEQNLVDC-----SETFG--NHGCEGGLMDNAFQYIKANGG 198

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C+F K  + A+   F  +    ED +   +   GP++VAI+A 
Sbjct: 199 IDTEKSYPYEAED--GECRFKKQNVGATDTGFVDIEQGSEDDLKKAVATVGPVSVAIDAS 256

Query: 292 Y--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV     C S +LDHGVL+VGYG           K YW++KNSW ESWG+N
Sbjct: 257 HSSFQLYSEGVYDETECSSEQLDHGVLVVGYGVE-------DGKKYWLVKNSWAESWGDN 309

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY K+ R + N CG+ S  S
Sbjct: 310 GYIKMSRDKDNQCGIASAAS 329


>gi|18424347|ref|NP_568921.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|71152227|sp|Q8H166.2|ALEU_ARATH RecName: Full=Thiol protease aleurain; Short=AtALEU; AltName:
           Full=Senescence-associated gene product 2; Flags:
           Precursor
 gi|7230640|gb|AAF43041.1|AF233883_1 AALP protein [Arabidopsis thaliana]
 gi|13430722|gb|AAK25983.1|AF360273_1 putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|9757740|dbj|BAB08221.1| AALP protein [Arabidopsis thaliana]
 gi|21617934|gb|AAM66984.1| cysteine proteinase AALP [Arabidopsis thaliana]
 gi|23397068|gb|AAN31819.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|23397074|gb|AAN31822.1| putative cysteine proteinase AALP [Arabidopsis thaliana]
 gi|24417304|gb|AAN60262.1| unknown [Arabidopsis thaliana]
 gi|222423506|dbj|BAH19723.1| AT5G60360 [Arabidopsis thaliana]
 gi|222424411|dbj|BAH20161.1| AT5G60360 [Arabidopsis thaliana]
 gi|332009930|gb|AED97313.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 358

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/351 (40%), Positives = 184/351 (52%), Gaps = 34/351 (9%)

Query: 27  DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTI 83
           D    IR V+DG  E+    E + + +LG   H   F+ F  ++ K Y + EE   RF+I
Sbjct: 27  DESNPIRMVSDGLREV----EESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSI 82

Query: 84  FKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND 143
           FK NL       K   S   G+ QF+DLT  EF+RT LG  +             +    
Sbjct: 83  FKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHK--VTEAA 140

Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
           LP   DWRE G V PVKDQG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    
Sbjct: 141 LPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAF 200

Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN 263
           +       + GCNGGL + AFEY    GGL  E+ YPYTG D    CKF    +   V N
Sbjct: 201 N-------NYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDE--TCKFSAENVGVQVLN 251

Query: 264 FSVVSL---DEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLL 316
              ++L   DE + A  LV+  P+++A   ++  + Y  GV     C      ++H VL 
Sbjct: 252 SVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLA 309

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
           VGYG            PYW+IKNSWG  WG+ GY+K+  G+N+CG+ +  S
Sbjct: 310 VGYGVEDGV-------PYWLIKNSWGADWGDKGYFKMEMGKNMCGIATCAS 353


>gi|326501772|dbj|BAK02675.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 333

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 180/321 (56%), Gaps = 28/321 (8%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTP 113
            H+ L+K+  NK Y+  EEH  R T ++ NL++   H        H    G+ +++D+T 
Sbjct: 26  QHWKLWKEANNKRYSDAEEHVRRAT-WEGNLQKVQEHNLQADLGVHTYWLGMNKYADMTV 84

Query: 114 AEFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSF 171
            EF +   G    +R  +  D+      +   LP   DWR+KG V  VKDQG CGSCW+F
Sbjct: 85  TEFVKVMNGYNATMRGQRTQDRHTFSFNSKIALPDTVDWRDKGYVTDVKDQGQCGSCWAF 144

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           STTGALEG +F  TGKLVSLSEQ LVDC  +         + GCNGGLM+ AFEY  +  
Sbjct: 145 STTGALEGQHFKQTGKLVSLSEQNLVDCSGK-------QGNMGCNGGLMDQAFEYIKENN 197

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINA 290
           G+  E+ YPY   D  + C+F  + + A+   F+ + S DE  +   +   GP++VAI+A
Sbjct: 198 GIDTEDSYPYEAVD--NQCRFKAANVGATDTGFTDITSKDESALQQAVATVGPISVAIDA 255

Query: 291 VY--MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
            +   Q Y  GV     CS+ RLDHGVL VGYG+          K YW++KNSWGE WG+
Sbjct: 256 GHTSFQLYKHGVYNEPFCSQTRLDHGVLAVGYGTD-------SGKDYWLVKNSWGEGWGD 308

Query: 348 NGYYKICRG-RNVCGVDSMVS 367
            GY K+ R  RN CG+ +  S
Sbjct: 309 KGYIKMTRNKRNQCGIATAAS 329


>gi|217323618|gb|ACK38176.1| midgut cysteine peptidase, partial [Sphenophorus levis]
          Length = 324

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/310 (40%), Positives = 172/310 (55%), Gaps = 25/310 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA----ARHQKLDPSATHGITQFSDLTPA 114
           HF  FK K  K Y +Q E   RF IF+ NLR+     A +++   S T GI +F+D+T A
Sbjct: 25  HFQSFKLKHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRA 84

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EF+   L  + K +    A +   L     +P   DWR +  V P+KDQ  CGSCWSF+ 
Sbjct: 85  EFK-AMLATQVKTKPSIVATKTFQLADGVSVPESIDWRSRNVVTPIKDQAQCGSCWSFAV 143

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
            G+ EGA  L+TGKL   SEQQLVDC  +         + GC+GG ++  F Y ++  GL
Sbjct: 144 VGSTEGAYALSTGKLTRFSEQQLVDCTTD--------LNYGCDGGYLDDTFPY-IQTNGL 194

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             E DYPYTG D   +C +D SK+   V+++  V  +E  +   +   GP+A+AINA  +
Sbjct: 195 ELESDYPYTGYD--GSCSYDSSKVVTKVSSYVSVPANEQALLEAVGTAGPVAIAINADDL 252

Query: 294 QTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y  G+     C    LDHGVL VGY S            YW+IKNSWG  WGE+GY++
Sbjct: 253 QFYFSGIIDDKYCDPEWLDHGVLAVGYNSE-------NGLDYWLIKNSWGADWGESGYFR 305

Query: 353 ICRGRNVCGV 362
             RG+N+CGV
Sbjct: 306 FLRGQNICGV 315


>gi|343471318|emb|CCD16236.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  226 bits (576), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 176/311 (56%), Gaps = 27/311 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK ++ RA      +P AT G+TQFSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TYL G +      +   +   + T   P   DWR+KGAV PVKDQGSCGSCW+F+ TG
Sbjct: 98  RATYLNGAKYYAAALERPRKVVNVSTGKAPPAVDWRKKGAVTPVKDQGSCGSCWAFAATG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD         + +  C GG  + AF++ + +  G +
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCD---------TTEDNCRGGFADRAFKWIVSSNKGNV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK--IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             EE YPY  TD G+    +KS   + A ++    +  DE+ IA  L +NGP+A+A++A 
Sbjct: 209 FTEESYPYASTD-GYVPPCNKSGKVVGAKISGHINLPKDENAIAEWLARNGPVAIAVDAS 267

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
               Y GGV  SC    S  L H VLLVGY           + PYWIIKNSW + WGE G
Sbjct: 268 TFLDYKGGVLTSCS---SEGLSHDVLLVGYNDT-------SKPPYWIIKNSWDKEWGEEG 317

Query: 350 YYKICRGRNVC 360
           Y +I +G N+C
Sbjct: 318 YIRIEKGTNLC 328


>gi|403293601|ref|XP_003937801.1| PREDICTED: cathepsin F [Saimiri boliviensis boliviensis]
          Length = 379

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/366 (42%), Positives = 202/366 (55%), Gaps = 38/366 (10%)

Query: 17  SAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNND-------LLGAEHHFSLFKKKFNK 69
           SA + G+++  +  L +   D G+E  S   S  N+        +     F  F   +N+
Sbjct: 34  SAFTQGSVM--ISSLSQPHPDNGNETFSPVFSLLNEDPLPQDLTVKMASIFRNFVITYNR 91

Query: 70  AYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLR 128
            Y S+EE   R +IF  N+ RA + Q LD  +A +G+T+FSDLT  EFR  YL    +  
Sbjct: 92  TYESKEEAQWRLSIFAHNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNPLLREE 151

Query: 129 LPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
             K   QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +EG  FL  G 
Sbjct: 152 PGKKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNVEGQWFLNQGT 209

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           L+SLSEQ+L+DCD           D  C GGL +SA+      GGL  E+DY Y    RG
Sbjct: 210 LLSLSEQELLDCDK---------IDKACMGGLPSSAYSAIKNLGGLETEDDYSY----RG 256

Query: 248 H--ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY- 304
           H  AC F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y  G+S P  
Sbjct: 257 HMQACSFSPEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLR 316

Query: 305 -ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGV 362
            +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + RG   CGV
Sbjct: 317 PLCSPWLIDHAVLLVGYGNRS-------DIPFWAIKNSWGTDWGEKGYYYLHRGSGACGV 369

Query: 363 DSMVST 368
           ++M S+
Sbjct: 370 NTMASS 375


>gi|30023547|gb|AAO48766.2| cathepsin L-like cysteine proteinase [Tenebrio molitor]
          Length = 337

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/325 (42%), Positives = 182/325 (56%), Gaps = 29/325 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLT 112
           +  +  FK   NK Y S+ E   R  IF  N    A+H KL      S   GI +++D+ 
Sbjct: 24  QEQWGAFKMTHNKQYQSETEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADML 83

Query: 113 PAEFRRTYLGLRRK---LRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGS 167
             EF +   G  R    LR  +  D    LP  +  LP   DWR+KGAV PVKDQG CGS
Sbjct: 84  HHEFVQVLNGFNRTKSGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQGQCGS 143

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CWSFS TG+LEG +F  +GKLVSLSEQ LVDC      E+ G  ++GCNGGLM++AF Y 
Sbjct: 144 CWSFSATGSLEGQHFRQSGKLVSLSEQNLVDC-----SEKFG--NNGCNGGLMDNAFRYI 196

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
              GG+  E+ YPY   D    C +  K+K A       + S +ED++ + +   GP++V
Sbjct: 197 KANGGIDTEQAYPYKAEDE--KCHYKPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSV 254

Query: 287 AINAVY--MQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           AI+A +   Q Y GGV     CS  +LDHGVL+VGYG+            YW++KNSWG+
Sbjct: 255 AIDASHQSFQLYSGGVYYEPDCSASQLDHGVLVVGYGTEDDGT------DYWLVKNSWGK 308

Query: 344 SWGENGYYKICRGR-NVCGVDSMVS 367
           SWG+ GY K+ R R N CG+ +  S
Sbjct: 309 SWGDQGYIKMARNRNNNCGIATEAS 333


>gi|18419649|gb|AAL69389.1|AF462226_1 putative cysteine proteinase [Narcissus pseudonarcissus]
          Length = 136

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 103/125 (82%), Positives = 115/125 (92%)

Query: 247 GHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC 306
           G  CK DKSKIAASV+NFSVVS+DE+QIAANLV++GPLA+ INA +MQTYIGGVSCPYIC
Sbjct: 5   GAVCKLDKSKIAASVSNFSVVSIDEEQIAANLVQHGPLAIGINAAFMQTYIGGVSCPYIC 64

Query: 307 SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMV 366
            + LDHGVLLVGYGS+G+APIR KEKPYWIIKNSWGE+WGE GYYKIC+GRNVCGVDSMV
Sbjct: 65  GKHLDHGVLLVGYGSSGWAPIRFKEKPYWIIKNSWGENWGEKGYYKICKGRNVCGVDSMV 124

Query: 367 STVAA 371
           STV A
Sbjct: 125 STVTA 129


>gi|115495381|ref|NP_001068884.1| cathepsin F precursor [Bos taurus]
 gi|111304901|gb|AAI20004.1| Cathepsin F [Bos taurus]
 gi|296471599|tpg|DAA13714.1| TPA: cathepsin F [Bos taurus]
          Length = 460

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 143/317 (45%), Positives = 181/317 (57%), Gaps = 31/317 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y SQEE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 163 FKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTARYGVTKFSDLTEEEFRT 222

Query: 119 TYLGLRRKLRLPKDA---DQAPILPTNDLPA-DFDWREKGAVGPVKDQGSCGSCWSFSTT 174
            YL       L KDA   +  P  P  D+P   +DWR KGAV  VKDQG CGSCW+FS T
Sbjct: 223 IYLN-----PLLKDAPGRNMRPAQPVTDVPPPQWDWRNKGAVTNVKDQGMCGSCWAFSVT 277

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL 
Sbjct: 278 GNVEGQWFLKRGTLLSLSEQELLDCDK---------TDKACLGGLPSNAYSAIRTLGGLE 328

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            E+DY Y G  R   C F   K    + +   +S +E ++AA L KNGP+++AINA  MQ
Sbjct: 329 TEDDYSYRG--RLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKNGPVSIAINAFGMQ 386

Query: 295 TYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Y  G+S P   +CS  L DH VLLVGYG+           P+W IKNSWG  WGE GYY
Sbjct: 387 FYRHGISHPLRPLCSPWLIDHAVLLVGYGNRSAI-------PFWAIKNSWGTDWGEEGYY 439

Query: 352 KICRGRNVCGVDSMVST 368
            + RG   CGV+ M S+
Sbjct: 440 YLHRGSGACGVNIMASS 456


>gi|296218871|ref|XP_002755611.1| PREDICTED: cathepsin F [Callithrix jacchus]
          Length = 489

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 147/317 (46%), Positives = 186/317 (58%), Gaps = 32/317 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 193 FRNFVITYNRTYESKEEAQWRLSVFVHNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 252

Query: 119 TYLGLRRKLRLP-KDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           TYL     LR P K   QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG 
Sbjct: 253 TYLN--PLLREPGKKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGN 308

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG  FL  G L+SLSEQ+L+DCD           D  C GGL +SA+      GGL  E
Sbjct: 309 VEGQWFLNQGTLLSLSEQELLDCDK---------IDKACMGGLPSSAYSAIKNLGGLETE 359

Query: 237 EDYPYTGTDRGH--ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           +DY Y    RGH  AC F   K    + +   +S +E ++AA L K GP++VAINA  MQ
Sbjct: 360 DDYSY----RGHMQACNFSPEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQ 415

Query: 295 TYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Y  G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY
Sbjct: 416 FYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYY 468

Query: 352 KICRGRNVCGVDSMVST 368
            + RG   CGV++M S+
Sbjct: 469 YLHRGSGACGVNTMASS 485


>gi|288548566|gb|ADC52431.1| cathepsin L2 cysteine protease [Pinctada fucata]
          Length = 330

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 185/327 (56%), Gaps = 34/327 (10%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFS 109
           +G ++ +++FKK++NK Y ++EE   R  ++++NL     H        H    G+ ++ 
Sbjct: 21  VGLDNEWNIFKKQYNKLYQNEEEARRRL-VWESNLDFITLHNLAADRGEHTFWVGMNEYG 79

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTN---DLPADFDWREKGAVGPVKDQGSC 165
           D+T  EF +T  G R + +       AP+ +P N   DLP   DWR KG V P+K+QG C
Sbjct: 80  DMTNEEFTKTMNGYRMRNK----TSNAPVFMPPNNMGDLPDTVDWRPKGYVTPIKNQGQC 135

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           GSCWSFS TG+LEG  F  TGKLVSLSEQ LVDC  +         + GC GGLM+ AF 
Sbjct: 136 GSCWSFSATGSLEGQTFKKTGKLVSLSEQNLVDCSKK-------QGNHGCEGGLMDDAFT 188

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPL 284
           Y     G+  E  YPY   D    C+F  + + A+   F  + + DE+ +   +   GP+
Sbjct: 189 YIKANNGIDTEASYPYKARD--GKCEFKSADVGATDTGFVDIKTKDEEALKQAVATVGPI 246

Query: 285 AVAINAVYM--QTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           +VAI+A +M  Q Y  GV   + CS+ +LDHGVL VGYG+          K YW++KNSW
Sbjct: 247 SVAIDASHMSFQLYRTGVYHDWFCSQTKLDHGVLAVGYGTE-------DSKDYWLVKNSW 299

Query: 342 GESWGENGYYKICRG-RNVCGVDSMVS 367
           GESWG+ GY ++ R  RN CG+ +  S
Sbjct: 300 GESWGQKGYIQMSRNRRNNCGIATSAS 326


>gi|391340505|ref|XP_003744580.1| PREDICTED: digestive cysteine proteinase 1-like [Metaseiulus
           occidentalis]
          Length = 469

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 138/321 (42%), Positives = 177/321 (55%), Gaps = 42/321 (13%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA---THGITQFSDLTPAE 115
           +F  FK+ F K Y   +EH  R  IF+ NL    +      ++   T GITQF+D++ AE
Sbjct: 165 NFEHFKEHFGKTYEG-DEHALRQGIFQRNLAHIEKFNAEKAASRGYTLGITQFADMSTAE 223

Query: 116 FRRTYLGLR---------RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCG 166
           FR+TYLGLR         RKL+    AD        DLP   DWR+KGAV PVKDQG CG
Sbjct: 224 FRQTYLGLRMNASTIAKLRKLQREVVADD------RDLPEAVDWRDKGAVSPVKDQGQCG 277

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FST+GA+EG +FL  G+L+SLSEQQ+VDC            D GCNGG    A EY
Sbjct: 278 SCWAFSTSGAIEGQHFLKNGELLSLSEQQMVDCSW---------LDFGCNGGQPMLAMEY 328

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLA 285
               GGL  E  YPY G   G +C  DK   AA +  F +     E  +   + K GP++
Sbjct: 329 VRFNGGLELETAYPYKGV--GGSCHSDKKSAAAKITGFWMAGFYSESALQKAVAKVGPIS 386

Query: 286 VAINAVY--MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           V ++A     Q Y  G+  P  CS   LDH VL VGYG++        +  YW++KNSW 
Sbjct: 387 VGMDASGEDFQHYKSGIYNPESCSSIGLDHAVLAVGYGTS-------DDGDYWLVKNSWN 439

Query: 343 ESWGENGYYKICRGR-NVCGV 362
            SWGE GY+K+ R + N CG+
Sbjct: 440 TSWGEKGYFKLPRNKGNKCGI 460


>gi|300122868|emb|CBK23875.2| unnamed protein product [Blastocystis hominis]
          Length = 316

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/317 (43%), Positives = 175/317 (55%), Gaps = 34/317 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F  F+ K+ K Y S E  ++R  +   N+    +    + S T G+T F+D+T  EF
Sbjct: 24  EKLFQTFEAKYGKNYLSSE-REYRKKVLAYNMDWIEKFNSDEHSFTLGMTPFADMTNTEF 82

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
             + L G  +K   P +  QA +L  N      DWREKGAV PVK+QGSCGSCW+FS TG
Sbjct: 83  ATSKLCGCMKK---PLNHKQARVL-NNMAVESIDWREKGAVTPVKNQGSCGSCWAFSATG 138

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           ALEG NF+ATGKLVSLSEQQLVDCD E         D+GC GG M++AFEY +K  GL  
Sbjct: 139 ALEGGNFVATGKLVSLSEQQLVDCDTE---------DAGCGGGFMDTAFEYVMKK-GLCT 188

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYM 293
           EEDYPY   D    CK D+     S+  +  V  ++       +   P++VAI A     
Sbjct: 189 EEDYPYHAKDED--CKDDQCTSVISITGYEDVPANDGVALKQALTKAPVSVAIQADSFVF 246

Query: 294 QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           Q Y GGV    +C   L+HGVL VGY            K Y I+KNSWG SWG+ GY KI
Sbjct: 247 QMYTGGVLDSDMCGTSLNHGVLAVGYA-----------KEYIIVKNSWGASWGDKGYVKI 295

Query: 354 C---RGRNVCGVDSMVS 367
               +G  +CG++   S
Sbjct: 296 AHRDQGEGICGINMAAS 312


>gi|343473370|emb|CCD14732.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 124/308 (40%), Positives = 171/308 (55%), Gaps = 21/308 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGACGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD         + D GC GGLM+ + ++ + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCD---------TTDYGCRGGLMDKSLQWIVSSNKGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
              + YPY +G  +   C      + A ++    +  DE+ IA  L KNGP+A+A++A  
Sbjct: 209 FTAQSYPYASGGGKMPPCNKSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
              Y GGV    I S+ LDH VLLVGY           + PYWIIKNSW + WGE GY +
Sbjct: 269 FLGYKGGVLTSCI-SKGLDHDVLLVGYNDT-------SKPPYWIIKNSWSKGWGEEGYIR 320

Query: 353 ICRGRNVC 360
           I +G N C
Sbjct: 321 IEKGTNQC 328


>gi|344295816|ref|XP_003419606.1| PREDICTED: cathepsin F [Loxodonta africana]
          Length = 473

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 142/320 (44%), Positives = 185/320 (57%), Gaps = 35/320 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y ++EE   R ++F  N+ RA + Q LD  +A +GIT+FSDLT  EFR 
Sbjct: 176 FKNFVTTYNRTYETKEETKWRMSVFANNMIRAQKLQALDQGTAQYGITKFSDLTEEEFRT 235

Query: 119 TYLG--LR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            YL   LR    +K+RL K        P   +P D+DWR KGAV  VKDQG CGSCW+FS
Sbjct: 236 IYLNPLLREDPGQKMRLGK-------APKGPVPPDWDWRTKGAVTKVKDQGMCGSCWAFS 288

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG +EG  FL  G L+SLSEQ+L+DCD           D  C GG+ ++A+      GG
Sbjct: 289 VTGNVEGQWFLNRGTLLSLSEQELLDCD---------KVDKACMGGVPSNAYSAIKTLGG 339

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  EEDY Y G     AC F   K    + +   +S +E ++AA L KNGP++VAINA  
Sbjct: 340 LETEEDYSYHG--HLQACSFSAEKAKVYINDSVELSQNEYKLAAWLAKNGPISVAINAFG 397

Query: 293 MQTYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           MQ Y  G++ P   +CS  L DH VL+VGYG+         + P+W IKNSWG  WGE G
Sbjct: 398 MQFYRHGIAHPLRPLCSPWLIDHAVLIVGYGNR-------SDVPFWAIKNSWGTDWGEEG 450

Query: 350 YYKICRGRNVCGVDSMVSTV 369
           YY + RG   CGV++M S+ 
Sbjct: 451 YYYLHRGSGACGVNTMASSA 470


>gi|343477207|emb|CCD11901.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/320 (38%), Positives = 174/320 (54%), Gaps = 21/320 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG C S W+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGRPPMTVDWRKKGAVTPVKDQGKCDSSWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGGL 233
            +EG   +A  +L SLSEQ LV CD +         D GC GG  + AF++ L    G +
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCDTD---------DFGCRGGFSDPAFKWILWSNKGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      CK     + A ++N   +  DED I   L + GP+A+A++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCKMSGKVVGAKISNRLYLPEDEDMITEWLARKGPVAIAVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q+Y GGV    I S+ +++G LLVGY           + PYWIIKNSW + WGE GY +
Sbjct: 269 FQSYTGGVLTSCI-SKEMNYGALLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYIR 320

Query: 353 ICRGRNVCGVDSMVSTVAAA 372
           I +G N C V ++ S+   +
Sbjct: 321 IEKGTNQCLVKNLPSSAVVS 340


>gi|238481789|gb|ACR43934.1| cathepsin L-like cysteine proteinase [Haliotis diversicolor
           supertexta]
          Length = 347

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 141/316 (44%), Positives = 183/316 (57%), Gaps = 28/316 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLTPAEFRR 118
           FKK+  + Y   EE + RF IFK NL+    H K       S   GI QF+D+   EFR 
Sbjct: 45  FKKQHGRLYEKHEEEEERFEIFKQNLQYIEEHNKKFSLGQKSYYLGINQFADMKNEEFR- 103

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
            Y GLRR     ++   +  L    L  P + DWR+KG V  VK+QG CGSCWSFSTTG+
Sbjct: 104 MYNGLRRDYNYSREVQCSNHLTPEYLVAPDEVDWRKKGYVTAVKNQGQCGSCWSFSTTGS 163

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LEG +F  +GKLVSLSEQQLVDC  +   E       GCNGGLM+ AFEY +  GG+  E
Sbjct: 164 LEGQHFHKSGKLVSLSEQQLVDCSGKFGNE-------GCNGGLMDQAFEYIITNGGIETE 216

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVY--M 293
           E+YPY    R   C F KS++AA+ +    V S DE  +  ++ + GP+++AI+A +   
Sbjct: 217 EEYPYDA--RQERCHFKKSEVAATASGCVDVKSGDETDLKNSVAEVGPVSIAIDASHQSF 274

Query: 294 QTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y GGV   P   S  LDHGVL+VGYG+          + YW++KNSWG +WG  GY K
Sbjct: 275 QLYSGGVYDEPKCSSTELDHGVLVVGYGTD-------DGQDYWLVKNSWGTTWGLEGYVK 327

Query: 353 ICRGR-NVCGVDSMVS 367
           + R + N CGV +  S
Sbjct: 328 MSRNQDNQCGVATQAS 343


>gi|33112583|gb|AAP94047.1| cathepsin-L-like cysteine peptidase 03 [Tenebrio molitor]
          Length = 337

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/325 (42%), Positives = 181/325 (55%), Gaps = 29/325 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLT 112
           +  +  FK   NK Y S  E   R  IF  N    A+H KL      S   GI +++D+ 
Sbjct: 24  QEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADML 83

Query: 113 PAEFRRTYLGLRRK---LRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGS 167
             EF +   G  R    LR  +  D    LP  +  LP   DWR+KGAV PVKDQG CGS
Sbjct: 84  HHEFVQVLNGFNRTKSGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQGQCGS 143

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CWSFS TG+LEG +F  +GKLVSLSEQ LVDC      E+ G  ++GCNGGLM++AF Y 
Sbjct: 144 CWSFSATGSLEGQHFRKSGKLVSLSEQNLVDC-----SEKFG--NNGCNGGLMDNAFRYI 196

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
              GG+  E+ YPY   D    C +  K+K A       + S +ED++ + +   GP++V
Sbjct: 197 KANGGIDTEQAYPYKAEDE--KCHYKPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSV 254

Query: 287 AINAVY--MQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           AI+A +   Q Y GGV     CS  +LDHGVL+VGYG+            YW++KNSWG+
Sbjct: 255 AIDASHQSFQLYSGGVYYEPDCSASQLDHGVLVVGYGTEDDGT------DYWLVKNSWGK 308

Query: 344 SWGENGYYKICRGR-NVCGVDSMVS 367
           SWG+ GY K+ R R N CG+ +  S
Sbjct: 309 SWGDQGYIKMARNRDNNCGIATEAS 333


>gi|391328505|ref|XP_003738729.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 323

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 142/332 (42%), Positives = 187/332 (56%), Gaps = 40/332 (12%)

Query: 53  LLG-AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSAT---HGITQF 108
           LLG A  ++ L+KK   K+Y   EEH  R   +K+  +  A + + D   T    G+ +F
Sbjct: 11  LLGLASANWDLYKKVHGKSYGHDEEHFRRQLFYKSVAKINAHNLRHDLGLTTYRMGLNKF 70

Query: 109 SDLTPAEFRRTYLGL--------RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVK 160
           +D+T  EFR  + GL        R   R  K+      L    LP   DWREKG V PVK
Sbjct: 71  TDMTSEEFR-NFKGLKFDATKTKRNGTRFQKE------LLGEALPTQVDWREKGYVTPVK 123

Query: 161 DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
           +QG CGSCW+FSTTG+LEG +F ATGKLVSLSEQ LVDC            ++GCNGGLM
Sbjct: 124 NQGQCGSCWAFSTTGSLEGQHFKATGKLVSLSEQNLVDCSRV-------EGNNGCNGGLM 176

Query: 221 NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLV 279
           ++ F Y  + GG+  EE YPYTG D    C F+++ + A V  F  V   DE  + A + 
Sbjct: 177 DNGFTYIQQNGGIDTEESYPYTGKD--GDCAFNENSVGARVKGFVDVPQRDEAALQAAVA 234

Query: 280 KNGPLAVAINAV--YMQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
             GP++VAI+A     Q Y  GV     CS  +LDHGVL+VGYG+            YW+
Sbjct: 235 SVGPVSVAIDASNDSFQYYKEGVYDEPSCSFSQLDHGVLVVGYGTENGV-------DYWL 287

Query: 337 IKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           +KNSWG +WG++GY K+ R + N CG+ SM S
Sbjct: 288 VKNSWGPTWGQDGYIKMMRNKENQCGIASMAS 319


>gi|1163075|emb|CAA81061.1| cysteine proteinase [Trypanosoma congolense]
          Length = 442

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/308 (40%), Positives = 171/308 (55%), Gaps = 21/308 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 33  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 92

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 93  RATYHNGAEYYAAALKRPRKVVNVSTGKAPPAVDWRKKGAVTPVKDQGACGSCWAFSAIG 152

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD         + D GC GGLM+ + ++ + +  G +
Sbjct: 153 NIEGQWKVAGHELTSLSEQMLVSCD---------TTDYGCRGGLMDKSLQWIVSSNKGNV 203

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
              + YPY +G  +   C      + A ++    +  DE+ IA  L KNGP+A+A++A  
Sbjct: 204 FTAQSYPYASGGGKMPPCNKSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDATS 263

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
              Y GGV    I S+ LDH VLLVGY           + PYWIIKNSW + WGE GY +
Sbjct: 264 FLGYKGGVLTSCI-SKGLDHDVLLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYIR 315

Query: 353 ICRGRNVC 360
           I +G N C
Sbjct: 316 IEKGTNQC 323


>gi|297852302|ref|XP_002894032.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
 gi|297339874|gb|EFH70291.1| F2G19.31/F2G19.31 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 140/354 (39%), Positives = 194/354 (54%), Gaps = 33/354 (9%)

Query: 6   VVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGD-EILSHHESTNNDLLGAEHHFSLFK 64
           V+LFL  + V SAV    +  D    +       D E++S +E+       A++  SL +
Sbjct: 2   VILFLAMVAVASAVDMSIISYDEKHGVSTTGGRSDAEVMSIYEAWLVKHGKAQNQNSLVE 61

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
           K            D RF IFK NLR    H K + S   G+T+F+DLT  E+R  YLG +
Sbjct: 62  K------------DRRFEIFKDNLRFIDDHNKKNLSYRLGLTRFADLTNDEYRSKYLGAK 109

Query: 125 RKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
            + +  +   Q       D LP   DWR+KGAV  VKDQGSCGSCW+FST GA+EG N +
Sbjct: 110 MEKKGERRTSQRYEARVGDELPESIDWRKKGAVAEVKDQGSCGSCWAFSTIGAVEGINQI 169

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
            TG L++LSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  ++DYPY G
Sbjct: 170 VTGDLITLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKG 221

Query: 244 TDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVS 301
            D G   +  K+    ++ ++  V    ++     V + P++VAI A     Q Y  G+ 
Sbjct: 222 VD-GTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPVSVAIEAGGRAFQLYDSGIF 280

Query: 302 CPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
               C  +LDHGV+ VGYG+          K YWI++NSWG+SWGE+GY K+ R
Sbjct: 281 -DGTCGTQLDHGVVAVGYGTE-------NGKDYWIVRNSWGKSWGESGYLKMAR 326


>gi|343477225|emb|CCD11889.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 447

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/308 (40%), Positives = 171/308 (55%), Gaps = 21/308 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPPAVDWRKKGAVTPVKDQGACGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD         + D GC GGLM+ + ++ + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCD---------TTDYGCRGGLMDKSLQWIVSSNKGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
              + YPY +G  +   C      + A ++    +  DE+ IA  L KNGP+A+A++A  
Sbjct: 209 FTAQSYPYASGGGKMPPCNKSGKVVGAKISGHINLPKDENAIAEWLAKNGPVAIAVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
              Y GGV    I S+ LDH VLLVGY           + PYWIIKNSW + WGE GY +
Sbjct: 269 FLGYKGGVLTSCI-SKGLDHDVLLVGYDDT-------SKPPYWIIKNSWSKGWGEEGYIR 320

Query: 353 ICRGRNVC 360
           I +G N C
Sbjct: 321 IEKGTNQC 328


>gi|33112581|gb|AAP94046.1| cathepsin-L-like cysteine peptidase 02 [Tenebrio molitor]
          Length = 337

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/325 (42%), Positives = 181/325 (55%), Gaps = 29/325 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLT 112
           +  +  FK   NK Y S  E   R  IF  N    A+H KL      S   GI +++D+ 
Sbjct: 24  QEQWGAFKMTHNKQYQSDTEERFRMKIFMENSHTVAKHNKLYAQGLVSFKLGINKYADML 83

Query: 113 PAEFRRTYLGLRRK---LRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGS 167
             EF +   G  R    LR  +  D    LP  +  LP   DWR+KGAV PVKDQG CGS
Sbjct: 84  HHEFVQVLNGFNRTKSGLRSGESDDSVTFLPPANVQLPGQIDWRDKGAVTPVKDQGQCGS 143

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CWSFS TG+LEG +F  +GKLVSLSEQ LVDC      E+ G  ++GCNGGLM++AF Y 
Sbjct: 144 CWSFSATGSLEGQHFRKSGKLVSLSEQNLVDC-----SEKFG--NNGCNGGLMDNAFRYI 196

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
              GG+  E+ YPY   D    C +  K+K A       + S +ED++ + +   GP++V
Sbjct: 197 KANGGIDTEQAYPYKAEDE--KCHYKPKNKGATDRGYVDIESGNEDKLQSAVATVGPVSV 254

Query: 287 AINAVY--MQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           AI+A +   Q Y GGV     CS  +LDHGVL+VGYG+            YW++KNSWG+
Sbjct: 255 AIDASHQSFQLYSGGVYYEPECSPSQLDHGVLVVGYGTEDDGT------DYWLVKNSWGK 308

Query: 344 SWGENGYYKICRGR-NVCGVDSMVS 367
           SWG+ GY K+ R R N CG+ +  S
Sbjct: 309 SWGDQGYIKMARNRDNNCGIATEAS 333


>gi|146216000|gb|ABQ10202.1| cysteine protease Cp4 [Actinidia deliciosa]
          Length = 463

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/308 (42%), Positives = 171/308 (55%), Gaps = 26/308 (8%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR 128
           KAY +  E + RF IFK NLR    H  +  S   G+ +F+DLT  E+R  +LG   +++
Sbjct: 56  KAYNAIGEKERRFEIFKDNLRFVDEHNAVAGSYRVGLNRFADLTNEEYRSMFLGGNMEMK 115

Query: 129 ---LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
                  +D+      + LP   DWREKGAV PVKDQG CGSCW+FST  A+EG N + T
Sbjct: 116 ERSASTKSDRYAFRAGDKLPGSVDWREKGAVSPVKDQGQCGSCWAFSTISAVEGINQIVT 175

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           G+L+SLSEQ+LVDCD         S + GCNGGLM+  F++ +  GG+  EEDYPY   D
Sbjct: 176 GELISLSEQELVDCDK--------SYNMGCNGGLMDYGFQFIINNGGIDTEEDYPYRAVD 227

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCP 303
            G   +F K+    S+  +  V  D++      V N P++VAI A     Q Y  GV   
Sbjct: 228 -GTCDQFRKNARVVSINGYEDVPEDDENSLKKAVANQPVSVAIEAGGRAFQLYESGVFTG 286

Query: 304 YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV---- 359
           + C   LDHGV+ VGYG+            YW ++NSWG  WGENGY K+ R  N     
Sbjct: 287 H-CGTNLDHGVVAVGYGTENGVD-------YWTVRNSWGPKWGENGYIKLERNINATSGK 338

Query: 360 CGVDSMVS 367
           CG+ SM S
Sbjct: 339 CGIASMAS 346


>gi|4581057|gb|AAD24589.1|AF139913_1 cysteine protease [Trypanosoma congolense]
          Length = 440

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 126/320 (39%), Positives = 174/320 (54%), Gaps = 21/320 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG C S W+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPPAIDWRKKGAVTPVKDQGQCHSSWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD           D GC GG  + AF++ + +  G +
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCDTN---------DFGCGGGFSDPAFKWIVSSNKGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      C      + A + +   +  DE+ IA  L K GP+A+A++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCDKSGKVVGAKIRDRVDLPRDENAIAEWLAKKGPVAIAVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q+Y GGV    I S  LDHGVLLVGY           + PYWIIKNSWG+ WGE GY +
Sbjct: 269 FQSYTGGVLTSCI-SEHLDHGVLLVGYDDT-------SKPPYWIIKNSWGKGWGEEGYIR 320

Query: 353 ICRGRNVCGVDSMVSTVAAA 372
           I +G N C + ++ S+   +
Sbjct: 321 IEKGTNQCLMKNLPSSAVVS 340


>gi|154332645|ref|XP_001562139.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059587|emb|CAM37169.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/312 (42%), Positives = 172/312 (55%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + + YA+ +E   R   F+ NL     HQ  +P A  GIT+F DL+  EF   
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G     +  K A Q       DL   PA  DWREKGAV PVKDQG CGSCW+FS  G
Sbjct: 98  YLSGATHFAKAKKFASQYYRKVGADLSTAPAAVDWREKGAVTPVKDQGMCGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGGL 233
            +E   +LAT  L+SLSEQ+LV CD           D GCNGGLM  AF++ L  + G +
Sbjct: 158 NIESKWYLATHSLISLSEQELVSCD---------DVDEGCNGGLMLQAFDWLLNNRNGAV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
                YPY  +  G   +  +S    I A +     +  +ED +AA L  NGP+A+A++A
Sbjct: 209 YTGASYPYV-SGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y GGV  SC     ++L+HGVLLVGY   G       E PYW+IKNSWGE+WGE 
Sbjct: 268 SAFMSYTGGVLTSCD---GKQLNHGVLLVGYNMTG-------EVPYWLIKNSWGENWGEK 317

Query: 349 GYYKICRGRNVC 360
           GY ++ +G N C
Sbjct: 318 GYVRVRKGTNEC 329


>gi|254674508|dbj|BAH86062.1| cysteine protease [Haemaphysalis longicornis]
          Length = 333

 Score =  224 bits (572), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/316 (43%), Positives = 174/316 (55%), Gaps = 27/316 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSATHGITQFSDLTPAEFRR 118
           FK + NKAY+S  E   RF IF  N    A+H     K   S    + +F DL P EF +
Sbjct: 30  FKSQHNKAYSSHVEELLRFKIFTENTLLVAKHNAKYAKGLVSYKLAMNKFGDLLPHEFAK 89

Query: 119 TYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
              G R K    +     P    ND  LP   DWR+KGAV PVK+QG CGSCW+FSTTG+
Sbjct: 90  MVNGYRGKQNKEQRPTFIPPANLNDSSLPTTVDWRKKGAVTPVKNQGQCGSCWAFSTTGS 149

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LEG +F  TGKLVSLSEQ LVDC  +         + GCNGGLM++ F+Y    GG+  E
Sbjct: 150 LEGQHFRKTGKLVSLSEQNLVDCSDDFG-------NQGCNGGLMDNGFQYIKANGGIDTE 202

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY--M 293
           E +PYT  D    CKF K+ + A+ A F  +    ED +   +   GP++VAI+A +   
Sbjct: 203 ESHPYTAQDGD--CKFKKADVGATDAGFVDIQQGSEDDLKKAVATVGPVSVAIDASHGSF 260

Query: 294 QTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y  GV   P   S +LDHGVL VGYG           K YW++KNSWG  WG+NGY  
Sbjct: 261 QLYSQGVYDEPDCSSSQLDHGVLTVGYGVK-------NGKKYWLVKNSWGGDWGDNGYIL 313

Query: 353 ICRGR-NVCGVDSMVS 367
           + R + N CG+ S  S
Sbjct: 314 MSRDKDNQCGIASSAS 329


>gi|357216861|gb|AET71138.1| cysteine peptidase isoform b [Sphenophorus levis]
          Length = 324

 Score =  224 bits (572), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/310 (40%), Positives = 174/310 (56%), Gaps = 25/310 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA----ARHQKLDPSATHGITQFSDLTPA 114
           HF  FK K  K Y +Q E   RF IF+ NLR+     A +++   S T GI +F+D+T A
Sbjct: 25  HFQSFKLKHGKTYKNQAEETKRFAIFRENLRKIEAHNAEYKQGIHSYTQGINKFADMTRA 84

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EF+   L  + K +    A +   L     +P   DWR +  V P+KDQ  CGSCW+F+ 
Sbjct: 85  EFKAM-LATQVKTKPSIVATKTFQLADGVSVPESIDWRSRNVVTPIKDQAQCGSCWAFAV 143

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
            G+ EGA  L+TGKL   SEQQLVDC  +         + GC+GG ++  F Y ++  GL
Sbjct: 144 VGSTEGAYALSTGKLTRFSEQQLVDCTTD--------LNYGCDGGYLDDTFPY-IQTNGL 194

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             E DYPYTG D G+ C ++ SK+   V+++  V  +E  +   +   GP+A+AINA  +
Sbjct: 195 ELESDYPYTGYD-GY-CSYESSKVVTKVSSYVSVPANEQALLEAVGTAGPVAIAINADDL 252

Query: 294 QTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y  G+     C    LDHGVL VGY S          + YW+IKNSWG  WGE+GY++
Sbjct: 253 QFYFSGIIDDKYCDPEYLDHGVLAVGYDSE-------NGRDYWLIKNSWGADWGESGYFR 305

Query: 353 ICRGRNVCGV 362
             RG+N+CGV
Sbjct: 306 FLRGQNICGV 315


>gi|224096714|ref|XP_002310708.1| predicted protein [Populus trichocarpa]
 gi|222853611|gb|EEE91158.1| predicted protein [Populus trichocarpa]
          Length = 356

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 181/324 (55%), Gaps = 26/324 (8%)

Query: 40  DEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP 99
           D  LSH +S+          +  + +K  KAY    E   RF IFK NLR    H   + 
Sbjct: 8   DNHLSHDQSSWRSDDEVMSIYKWWLQKHGKAYNRLGEKAKRFEIFKNNLRFIDEHNSQNR 67

Query: 100 SATHGITQFSDLTPAEFRRTYLGLR----RKLRLPKDADQAPILPTND-LPADFDWREKG 154
           +   G+T+F+DLT  E+R  +LG R    R+L   K+  +       D LP   DWR KG
Sbjct: 68  TYKVGLTKFADLTNQEYRAMFLGTRSDPKRRLMKSKNPSERYAYKAGDKLPESVDWRGKG 127

Query: 155 AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 214
           AV P+KDQGSCGSCW+FST  A+EG N + TG+L+SLSEQ+LVDCD           ++G
Sbjct: 128 AVNPIKDQGSCGSCWAFSTVAAVEGINQIVTGELISLSEQELVDCDR--------FYNAG 179

Query: 215 CNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQ 273
           CNGGLM+ AF++ +  GGL  E+DYPY G D    C  DK K  A S+  F  V   +++
Sbjct: 180 CNGGLMDYAFQFIINNGGLDTEKDYPYLGND--DTCDRDKMKTKAVSIDGFEDVLPFDEK 237

Query: 274 IAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKE 331
                V + P++VAI A  + +Q Y  GV     C   LDHGV++VGYG+        K 
Sbjct: 238 ALQKAVAHQPVSVAIEASGMALQFYQSGVFTGE-CGTALDHGVVVVGYGTE-------KG 289

Query: 332 KPYWIIKNSWGESWGENGYYKICR 355
             YW+++NSWG  WGE+GY K+ R
Sbjct: 290 LDYWLVRNSWGTEWGEHGYIKMQR 313


>gi|37732137|gb|AAR02406.1| cysteine proteinase [Anthonomus grandis]
          Length = 322

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 171/307 (55%), Gaps = 26/307 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLTPAE 115
           F  FK +  K+Y +Q E   RF IF+AN+    +H  L      S    I QF+DLT  E
Sbjct: 26  FETFKVENGKSYRNQVEEVQRFNIFRANVLEIEQHNALYEQGLVSYKKAINQFTDLTQEE 85

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           F+  YLGL  K  L         L   ++P   DWR  G V  VK+QGSCGSCWSF+ TG
Sbjct: 86  FK-AYLGLHVKPVLNNTIQYE--LKGLEVPTSVDWRSAGQVTGVKNQGSCGSCWSFALTG 142

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           + EGA +    +LVSLSEQQLVDC          S + GCNGG +++ F Y ++  GL  
Sbjct: 143 STEGAYYRKHKQLVSLSEQQLVDCST--------SINYGCNGGFLDATFPY-IEQYGLQT 193

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           E  YPYTG D   +CK+D SK+   ++N+  +   E ++   +   GP+A+ ++A Y+ +
Sbjct: 194 ESSYPYTGVDG--SCKYDSSKVVTKISNYVSLHGSESKVLEPVGSIGPVAITMDASYLSS 251

Query: 296 YIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y  G+     C +  L+H VL+VGYGS          + YWI+KNSWG  WGE GY+++ 
Sbjct: 252 YSSGIYAANKCTTTNLNHAVLVVGYGSQ-------NGQNYWIVKNSWGSGWGEQGYFRLL 304

Query: 355 RGRNVCG 361
           RG N CG
Sbjct: 305 RGSNECG 311


>gi|18402225|ref|NP_566633.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|11994461|dbj|BAB02463.1| cysteine proteinase [Arabidopsis thaliana]
 gi|17065298|gb|AAL32803.1| cysteine proteinase [Arabidopsis thaliana]
 gi|20260004|gb|AAM13349.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332642713|gb|AEE76234.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 452

 Score =  224 bits (570), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 190/337 (56%), Gaps = 33/337 (9%)

Query: 43  LSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSAT 102
           ++  E+T N+   A   +  +  +  K Y    E + RF IFK NL+    H  + P+ T
Sbjct: 27  VTATETTRNEA-EARRMYERWLVENRKNYNGLGEKERRFEIFKDNLKFVEEHSSI-PNRT 84

Query: 103 H--GITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPV 159
           +  G+T+F+DLT  EFR  YL  +  + R+P   ++      + LP   DWR KGAV PV
Sbjct: 85  YEVGLTRFADLTNDEFRAIYLRSKMERTRVPVKGEKYLYKVGDSLPDAIDWRAKGAVNPV 144

Query: 160 KDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           KDQGSCGSCW+FS  GA+EG N + TG+L+SLSEQ+LVDCD         S + GC GGL
Sbjct: 145 KDQGSCGSCWAFSAIGAVEGINQIKTGELISLSEQELVDCDT--------SYNDGCGGGL 196

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANL 278
           M+ AF++ ++ GG+  EEDYPY  TD  + C  DK      ++  +  V  ++++     
Sbjct: 197 MDYAFKFIIENGGIDTEEDYPYIATDV-NVCNSDKKNTRVVTIDGYEDVPQNDEKSLKKA 255

Query: 279 VKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           + N P++VAI A     Q Y  GV     C   LDHGV+ VGYGS G        + YWI
Sbjct: 256 LANQPISVAIEAGGRAFQLYTSGVFTG-TCGTSLDHGVVAVGYGSEG-------GQDYWI 307

Query: 337 IKNSWGESWGENGYYKICRGRNV------CGVDSMVS 367
           ++NSWG +WGE+GY+K+   RN+      CGV  M S
Sbjct: 308 VRNSWGSNWGESGYFKL--ERNIKESSGKCGVAMMAS 342


>gi|118486542|gb|ABK95110.1| unknown [Populus trichocarpa]
          Length = 465

 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/323 (40%), Positives = 185/323 (57%), Gaps = 26/323 (8%)

Query: 42  ILSHHES--TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQK 96
           I+S+H++  T +     +   +++++   K  K Y +  E + RF IFK NL    +H  
Sbjct: 28  IISYHQTHATKSSWRTDDEVMAMYEEWLVKHGKNYNALGEKEKRFEIFKDNLMFIDQHNS 87

Query: 97  LDPSATHGITQFSDLTPAEFRRTYLGLR--RKLRLPKDADQAPILPTNDLPADFDWREKG 154
            + + T G+ +F+DLT  EFR  YLG R   K RLPK +D+      + LP   DWR++G
Sbjct: 88  ENRTYTVGLNRFADLTNEEFRSMYLGTRTGHKKRLPKTSDRYAPRVGDSLPDSVDWRKEG 147

Query: 155 AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 214
           AV  VKDQG CGSCW+FST  A+EG N + TG L++LSEQ+LVDCD         S + G
Sbjct: 148 AVAEVKDQGGCGSCWAFSTIAAVEGINKIVTGDLIALSEQELVDCDT--------SYNEG 199

Query: 215 CNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQI 274
           CNGGLM+ AFE+ +  GG+  E+DYPY G D G    + K+    S+ ++  V  +++  
Sbjct: 200 CNGGLMDYAFEFIINNGGIDTEDDYPYLGRD-GRCDTYRKNAKVVSIDSYEDVPENDETA 258

Query: 275 AANLVKNGPLAVAIN--AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEK 332
               V N P++VAI       Q Y  GV     C   LDHGV  VGYG+        K K
Sbjct: 259 LKKAVANQPVSVAIEGGGRNFQLYNSGVFTGE-CGTSLDHGVAAVGYGTE-------KGK 310

Query: 333 PYWIIKNSWGESWGENGYYKICR 355
            YWI++NSWG+SWGE+GY ++ R
Sbjct: 311 DYWIVRNSWGKSWGESGYIRMER 333


>gi|330805273|ref|XP_003290609.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
 gi|325079248|gb|EGC32857.1| hypothetical protein DICPUDRAFT_92519 [Dictyostelium purpureum]
          Length = 333

 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 134/314 (42%), Positives = 183/314 (58%), Gaps = 24/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  + +K ++AY S EE   R+  FK N+    +    +     G+T+F+DLT  E+++ 
Sbjct: 33  FIGWMRKHDRAY-SHEEFTDRYQAFKENMDFIHKWNSQESDTVLGLTKFADLTNEEYKKH 91

Query: 120 YLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           YLG++  ++   +A Q  +       P   DWREKGAV  VKDQG CGSCWSFSTTGA+E
Sbjct: 92  YLGIKVNVKKNLNAAQKGLKFFKFTGPDSIDWREKGAVSQVKDQGQCGSCWSFSTTGAVE 151

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           GA+ + +G +VSLSEQ LVDC  +         + GC GGLM +AFEY +  GG+  E  
Sbjct: 152 GAHQIKSGNMVSLSEQNLVDCSGQYG-------NQGCEGGLMVNAFEYIIDNGGIATESS 204

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVYM--QT 295
           YPYT       CKF KS   A++  +  +   +ED + A L K  P++VAI+A +M  Q 
Sbjct: 205 YPYTAAQG--RCKFTKSMNGANIIGYKEIPQGEEDSLTAALAKQ-PVSVAIDASHMSFQL 261

Query: 296 YIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y  GV   P   S  LDHGVL VGYG+       L+ K Y+IIKNSWG +WG++GY  + 
Sbjct: 262 YSSGVYDEPACSSEALDHGVLAVGYGT-------LEGKDYYIIKNSWGPTWGQDGYIFMS 314

Query: 355 R-GRNVCGVDSMVS 367
           R  +N CGV +M S
Sbjct: 315 RNAQNQCGVATMAS 328


>gi|30575716|gb|AAP33050.1| cysteine proteinase 3 [Clonorchis sinensis]
 gi|358339353|dbj|GAA47433.1| cathepsin F [Clonorchis sinensis]
          Length = 327

 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 185/318 (58%), Gaps = 26/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K+Y S ++ ++RF +FK NL R  + Q ++  +A +G+TQFSDLT  
Sbjct: 27  ARQLYEEFKLKYKKSY-SNDDDEYRFRVFKDNLLRIKQFQNMERGTAKYGVTQFSDLTAQ 85

Query: 115 EFRRTYLGLRRKLR-LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EF+  YL  R K   +P D +  P +  +    +FDWR  GAVGPV DQG CGSCW+FS 
Sbjct: 86  EFKVRYL--RSKFGGVPVDREPVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSA 143

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
            G +EG  F  T  L+ LSEQQL+DCD           D GCNGG    AF+  L  GGL
Sbjct: 144 VGNIEGQWFRKTDNLLQLSEQQLLDCDE---------VDEGCNGGTPQQAFKQILGMGGL 194

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             + DYPY G  R   C+   SK+   +    ++  DE   A  L + GPL+ A+NA+++
Sbjct: 195 QLDSDYPYEG--REGQCRMVPSKVKVYINGSKILPEDEQIQAQMLKETGPLSSALNALFL 252

Query: 294 QTYIGGV--SCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y  G+    P +C ++ L+H VL VGYG  G    RL   PYW +KNSW   +GENGY
Sbjct: 253 QFYTEGILHPLPALCDAQSLNHAVLTVGYGKEG----RL---PYWTVKNSWSTMFGENGY 305

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++++VST
Sbjct: 306 FRIYRGDGTCGINTLVST 323


>gi|118429521|gb|ABK91808.1| cysteine proteinase prozyme precursor [Clonorchis sinensis]
          Length = 316

 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 185/318 (58%), Gaps = 26/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K+Y S ++ ++RF +FK NL R  + Q ++  +A +G+TQFSDLT  
Sbjct: 16  ARQLYEEFKLKYKKSY-SNDDDEYRFRVFKDNLLRIKQFQNMERGTAKYGVTQFSDLTAQ 74

Query: 115 EFRRTYLGLRRKLR-LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EF+  YL  R K   +P D +  P +  +    +FDWR  GAVGPV DQG CGSCW+FS 
Sbjct: 75  EFKVRYL--RSKFGGVPVDREPVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSA 132

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
            G +EG  F  T  L+ LSEQQL+DCD           D GCNGG    AF+  L  GGL
Sbjct: 133 VGNIEGQWFRKTDNLLQLSEQQLLDCDE---------VDEGCNGGTPQQAFKQILGMGGL 183

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             + DYPY G  R   C+   SK+   +    ++  DE   A  L + GPL+ A+NA+++
Sbjct: 184 QLDSDYPYEG--REGQCRMVPSKVKVYINGSKILPEDEQIQAQMLKETGPLSSALNALFL 241

Query: 294 QTYIGGV--SCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y  G+    P +C ++ L+H VL VGYG  G    RL   PYW +KNSW   +GENGY
Sbjct: 242 QFYTEGILHPLPALCDAQSLNHAVLTVGYGKEG----RL---PYWTVKNSWSTMFGENGY 294

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++++VST
Sbjct: 295 FRIYRGDGTCGINTLVST 312


>gi|161408095|dbj|BAF94151.1| cathepsin L-like cysteine protease 1 [Plautia stali]
          Length = 344

 Score =  224 bits (570), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 177/324 (54%), Gaps = 28/324 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLR----RAARHQKLDPSATHGITQFSDL 111
           A   F+ FK ++ K Y S     +R  ++K N +       R+++ + +    +   +D+
Sbjct: 19  AASEFTRFKSQYRKDYPSDSVERYRKKVYKQNEKFVREHNERYERGEVTYKMALNHLADM 78

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQA-PILPTND--LPADFDWREKGAVGPVKDQGSCGSC 168
            P EF  T+LG  R LR      +  P     D  +  + DWR+KGA+ PVKDQG CGSC
Sbjct: 79  HPREFMATFLGFNRSLRATNKVPEGIPFRHNKDAVIQKEVDWRQKGAISPVKDQGHCGSC 138

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           W+FS+TGALE   FL  G+ VSLSEQ L+DC            ++GC GGLM  AF+Y  
Sbjct: 139 WAFSSTGALEAHTFLKKGRRVSLSEQNLIDCS-------LNYGNNGCEGGLMEQAFQYVR 191

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVA 287
              G+  EE YPY G D    C+F K+ + A+ A F ++ S DE  +   +   GPL++A
Sbjct: 192 DNDGIDTEEAYPYEGED--SECRFKKNNVGATDAGFVTIPSGDEQALMEAVATQGPLSIA 249

Query: 288 INAV--YMQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           I+A     Q Y  GV   P   S +LDHGVLLVGYG         K++ YW++KNSW E 
Sbjct: 250 IDASNPSFQFYSEGVYYEPECSSAQLDHGVLLVGYGVE-------KDQKYWLVKNSWSEQ 302

Query: 345 WGENGYYKICRGR-NVCGVDSMVS 367
           WGENGY K+ R + N CG+ +  S
Sbjct: 303 WGENGYIKMARNKDNNCGIATQAS 326


>gi|224136808|ref|XP_002326950.1| predicted protein [Populus trichocarpa]
 gi|222835265|gb|EEE73700.1| predicted protein [Populus trichocarpa]
          Length = 456

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 132/323 (40%), Positives = 185/323 (57%), Gaps = 26/323 (8%)

Query: 42  ILSHHES--TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQK 96
           I+S+H++  T +     +   +++++   K  K Y +  E + RF IFK NL    +H  
Sbjct: 19  IISYHQTHATKSSWRTDDEVMAMYEEWLVKHGKNYNALGEKEKRFEIFKDNLMFIDQHNS 78

Query: 97  LDPSATHGITQFSDLTPAEFRRTYLGLR--RKLRLPKDADQAPILPTNDLPADFDWREKG 154
            + + T G+ +F+DLT  EFR  YLG R   K RLPK +D+      + LP   DWR++G
Sbjct: 79  ENRTYTVGLNRFADLTNEEFRSMYLGTRTGHKKRLPKTSDRYAPRVGDSLPDSVDWRKEG 138

Query: 155 AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 214
           AV  VKDQG CGSCW+FST  A+EG N + TG L++LSEQ+LVDCD         S + G
Sbjct: 139 AVAEVKDQGGCGSCWAFSTIAAVEGINKIVTGDLIALSEQELVDCDT--------SYNEG 190

Query: 215 CNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQI 274
           CNGGLM+ AFE+ +  GG+  E+DYPY G D G    + K+    S+ ++  V  +++  
Sbjct: 191 CNGGLMDYAFEFIINNGGIDTEDDYPYLGRD-GRCDTYRKNAKVVSIDSYEDVPENDETA 249

Query: 275 AANLVKNGPLAVAIN--AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEK 332
               V N P++VAI       Q Y  GV     C   LDHGV  VGYG+        K K
Sbjct: 250 LKKAVANQPVSVAIEGGGRNFQLYNSGVFTGE-CGTSLDHGVAAVGYGTE-------KGK 301

Query: 333 PYWIIKNSWGESWGENGYYKICR 355
            YWI++NSWG+SWGE+GY ++ R
Sbjct: 302 DYWIVRNSWGKSWGESGYIRMER 324


>gi|146215994|gb|ABQ10199.1| cysteine protease Cp1 [Actinidia deliciosa]
          Length = 358

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 144/377 (38%), Positives = 191/377 (50%), Gaps = 34/377 (9%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH- 59
           M   +  L ++ +   +  SS +  DD + +   V+D     L   E++   +LG   H 
Sbjct: 1   MARTSFSLLIILIACVAGASSASTFDDENPIRTVVSDA----LREFETSILSVLGDSRHA 56

Query: 60  --FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
             F+ F  ++ K Y + EE   RF IF  NL+    H K   S T G+  F+D T  EFR
Sbjct: 57  LSFARFAHRYGKRYETAEETKLRFAIFSENLKLIRSHNKKGLSYTLGVNHFADWTWEEFR 116

Query: 118 RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           R  LG  +        +    L    LP   DWR  G V PVKDQG CGSCW+FSTTGAL
Sbjct: 117 RHRLGAAQNCSATTKGNHK--LTEEALPEMKDWRVSGIVSPVKDQGHCGSCWTFSTTGAL 174

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           E A   A GK +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE
Sbjct: 175 EAAYKQAFGKGISLSEQQLVDCAGAFN-------NFGCSGGLPSQAFEYVKYNGGLDTEE 227

Query: 238 DYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-M 293
            YPYTG  +   CKF    +   V    N ++ + DE + A   V+  P++VA   V   
Sbjct: 228 AYPYTG--KNGECKFSSENVGVQVLDSVNITLGAEDELKHAVAFVR--PVSVAFQVVNGF 283

Query: 294 QTYIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           + Y  GV     C R    ++H VL VGYG            PYW+IKNSWG  WG++GY
Sbjct: 284 RLYKEGVYTSDTCGRTPMDVNHAVLAVGYGVENGV-------PYWLIKNSWGADWGDSGY 336

Query: 351 YKICRGRNVCGVDSMVS 367
           +K+  G+N+CGV +  S
Sbjct: 337 FKMEMGKNMCGVATCAS 353


>gi|391343119|ref|XP_003745860.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 385

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 177/318 (55%), Gaps = 23/318 (7%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHGITQFSDLTPAEF 116
            H+  FK + NK Y S  E   R  IF+ N +    H  K +     G+  F DLT  E+
Sbjct: 79  QHWENFKAEHNKKYESFPEELMRRLIFEENHQFIEDHNSKKEFDFYLGMNHFGDLTNKEY 138

Query: 117 RRTYLGLRRKLRLPKDADQ--APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           R  YLG RR    P  A    +      D+P   DWR++G V PVK+QG CGSCW+FS  
Sbjct: 139 RERYLGYRRPENTPSKASYIFSRAEKIEDVPDQIDWRDQGFVTPVKNQGQCGSCWAFSAV 198

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G+LEG +F +TGKLVSLSEQ LVDC     PE     +SGCNGG M+ AFEY     G+ 
Sbjct: 199 GSLEGQHFKSTGKLVSLSEQNLVDCS---TPE----GNSGCNGGWMDQAFEYVKDNHGID 251

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYM 293
            E+ YPY GTD   +C F    I A++  F  V   DE+ +   +   GP++VAI+A  M
Sbjct: 252 TEDSYPYVGTD--GSCHFKNKSIGATLKGFMDVKEGDEEALRQAVGVAGPVSVAIDASSM 309

Query: 294 --QTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             Q Y GGV + P+  +  LDHGVL+VGYG       + + K +W++KNSWG  WG  GY
Sbjct: 310 LFQFYRGGVYNVPWCSTSELDHGVLVVGYGK------QFQGKDFWMVKNSWGVGWGIYGY 363

Query: 351 YKICRGR-NVCGVDSMVS 367
            ++ R + N CG+ S  S
Sbjct: 364 IEMSRNKGNQCGIASKAS 381


>gi|154332649|ref|XP_001562141.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059589|emb|CAM37171.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  223 bits (569), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 133/312 (42%), Positives = 172/312 (55%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + + YA+ +E   R   F+ NL     HQ  +P A  GIT+F DL+  EF   
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G     +  K A Q       DL   PA  DWREKGAV PVKDQG CGSCW+FS  G
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTAPAAVDWREKGAVTPVKDQGMCGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGGL 233
            +E   +LAT  L+SLSEQ+LV CD           D GCNGGLM  AF++ L  + G +
Sbjct: 158 NIESQWYLATHSLISLSEQELVSCD---------DVDEGCNGGLMLQAFDWLLNNRNGAV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
                YPY  +  G   +  +S    I A +     +  +ED +AA L  NGP+A+A++A
Sbjct: 209 YTGVSYPYV-SGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y GGV  SC     ++L+HGVLLVGY   G       E PYW+IKNSWGE+WGE 
Sbjct: 268 SAFMSYTGGVLTSCD---GKQLNHGVLLVGYNMTG-------EVPYWLIKNSWGENWGEK 317

Query: 349 GYYKICRGRNVC 360
           GY ++ +G N C
Sbjct: 318 GYVRVRKGTNEC 329


>gi|116242322|gb|ABJ89818.1| cysteine proteinase 3 [Clonorchis sinensis]
          Length = 327

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 185/318 (58%), Gaps = 26/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K+Y S ++ ++RF +FK NL R  + Q ++  +A +G+TQFSDLT  
Sbjct: 27  ARQLYEEFKLKYKKSY-SNDDDEYRFRVFKDNLLRIKQFQNMERGTAKYGVTQFSDLTAQ 85

Query: 115 EFRRTYLGLRRKLR-LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EF+  YL  R K   +P D +  P +  +    +FDWR  GAVGPV DQG CGSCW+FS 
Sbjct: 86  EFKVRYL--RSKFGGVPVDREPVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSA 143

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
            G +EG  F  T  L+ LSEQQL+DCD           D GCNGG    AF+  L  GGL
Sbjct: 144 VGNIEGQWFRKTDNLLQLSEQQLLDCD---------GVDEGCNGGTPQQAFKQILGMGGL 194

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             + DYPY G  R   C+   SK+   +    ++  DE   A  L + GPL+ A+NA+++
Sbjct: 195 QLDSDYPYEG--REGQCRMVPSKVKVYINGSKILPEDEQIQAQMLKETGPLSSALNALFL 252

Query: 294 QTYIGGV--SCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y  G+    P +C ++ L+H VL VGYG  G    RL   PYW +KNSW   +GENGY
Sbjct: 253 QFYTEGILHPLPALCDAQSLNHAVLTVGYGKEG----RL---PYWTVKNSWSTMFGENGY 305

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++++VST
Sbjct: 306 FRIYRGDGTCGINTLVST 323


>gi|148927394|gb|ABR19828.1| cysteine proteinase [Elaeis guineensis]
          Length = 469

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 127/318 (39%), Positives = 183/318 (57%), Gaps = 32/318 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAE 115
           +  +K +  ++Y + +E + R  IF+ NLR   +H     +  +    G+T+F+DLT  E
Sbjct: 47  YQAWKAQHARSYNALDEDEQRLEIFRDNLRFIDQHNAAANAGKYSFRLGLTRFADLTNEE 106

Query: 116 FRRTYLGLR-----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           +R TYLG+R     R+      +++     ++DLP   DWR+KGAV  VKDQGSCGSCW+
Sbjct: 107 YRSTYLGVRTAGSRRRRNSTVGSNRYRFRSSDDLPDSIDWRDKGAVVDVKDQGSCGSCWA 166

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST  A+EG N + TG L+SLSEQ+LVDCD           + GCNGGLM+ AFE+ +  
Sbjct: 167 FSTIAAVEGINHIVTGDLISLSEQELVDCDT--------YYNQGCNGGLMDYAFEFIISN 218

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           GG+  +EDYPYTG D G   ++ K+    ++ ++  V +++++     V N P++VAI A
Sbjct: 219 GGIDTDEDYPYTGRD-GSCDQYRKNAHVVTIDSYEDVPINDEKSLQKAVANQPVSVAIEA 277

Query: 291 --VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
                Q Y  G+   Y C   LDHGV  +GYGS          K YWI+KNSWG  WGE+
Sbjct: 278 GGRAFQLYESGIFTGY-CGTELDHGVTAIGYGSE-------NGKYYWIVKNSWGSDWGES 329

Query: 349 GYYKICRGRNV----CGV 362
           GY ++ R  N     CG+
Sbjct: 330 GYIRMERNINSATGKCGI 347


>gi|209731972|gb|ACI66855.1| Cathepsin H precursor [Salmo salar]
          Length = 328

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 136/316 (43%), Positives = 179/316 (56%), Gaps = 33/316 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E+HF L+  ++NK Y   EE+ HR  IF  N RR   H + +   T G+ QFSDLT AEF
Sbjct: 25  EYHFKLWMSQYNKVY-DMEEYYHRLQIFIENKRRIDYHNEGNHKFTMGLNQFSDLTFAEF 83

Query: 117 RRTYLGLRRKLRLPKD--ADQAPILPTN-DLPADFDWREKG-AVGPVKDQGSCGSCWSFS 172
           R+++L     L  P++  A +   + +N   P   DWR+KG  V  VK+QGSCGSCW+FS
Sbjct: 84  RKSFL-----LTEPQNCSATKGSHVSSNGPYPESVDWRKKGNYVTAVKNQGSCGSCWTFS 138

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTG LE    +ATGKL+ LSEQQLVDC    +       + GCNGGL + AFEY     G
Sbjct: 139 TTGCLESVTAIATGKLLQLSEQQLVDCAQAFN-------NHGCNGGLPSQAFEYIKFNKG 191

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVA--IN 289
           +M E+DYPYT  D    CKF     AA V +  ++   DE  +   + +  P+++A  + 
Sbjct: 192 IMTEDDYPYTAHDD--TCKFKTDLAAAFVKDVVNITKYDEMGMVDAVARFNPVSLAYEVT 249

Query: 290 AVYMQTYIGGVSCPYICSRRLD---HGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           + +M  Y GGV     C    D   H VL VGYG         K  PYWI+KNSWG SWG
Sbjct: 250 SDFMH-YDGGVYTSKECHNTTDTVNHAVLAVGYGEE-------KGTPYWIVKNSWGSSWG 301

Query: 347 ENGYYKICRGRNVCGV 362
             GY+ I RG+N+CG+
Sbjct: 302 MKGYFFIERGKNMCGL 317


>gi|449454309|ref|XP_004144898.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
 gi|449471311|ref|XP_004153272.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 349

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 134/360 (37%), Positives = 186/360 (51%), Gaps = 23/360 (6%)

Query: 14  VVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYAS 73
           +  S  S  TLI      I   T     I+ +       +      F  +  K +KAY S
Sbjct: 1   MALSTFSKATLILSATLFITYATAHDFSIVGYSPEHLASMDKTIELFESWMSKHSKAYRS 60

Query: 74  QEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDA 133
            EE  HRF IF  NL+      K   S   G+ +F+DL+  EF+  YLGLR +    + +
Sbjct: 61  IEEKLHRFEIFLDNLKHIDETNKKVSSYWLGLNEFADLSHEEFKSKYLGLRVEFPRKRSS 120

Query: 134 DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSE 193
                    DLP   DWR KGAV PVK+QGSCGSCW+FST  A+EG N + TG L SLSE
Sbjct: 121 RGFSYGDVEDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVTGNLTSLSE 180

Query: 194 QQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD 253
           Q+L+DCD         S ++GC GGLM+ AF+Y +   GL +EEDYPY   + G   +  
Sbjct: 181 QELIDCDR--------SFNNGCYGGLMDYAFQYIMSNSGLRKEEDYPYL-MEEGRCIREK 231

Query: 254 KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSRRLD 311
           +     +++ +  V  +++Q     + + P++VAI A     Q Y GG+     C  ++D
Sbjct: 232 EQFEVVTISGYEDVPANDEQSLLKALSHQPVSVAIEASSRNFQFYKGGIFTGR-CGTQMD 290

Query: 312 HGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG----RNVCGVDSMVS 367
           HGV  VGYGS+       +   Y I+KNSWG  WGENGY ++ R       +CG++ M S
Sbjct: 291 HGVTAVGYGSS-------EGTDYIIVKNSWGPKWGENGYIRMKRNTGKPEGLCGINQMAS 343


>gi|357619727|gb|EHJ72186.1| cathepsin [Danaus plexippus]
          Length = 336

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/358 (36%), Positives = 194/358 (54%), Gaps = 41/358 (11%)

Query: 6   VVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKK 65
           +++F++  + F+A +    + DV+++ + V    DE              A   F  F +
Sbjct: 1   MIVFVLCAISFTAAAPQNDVSDVEKVRKPVFYSMDE--------------APILFENFIR 46

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           ++NK Y S+E+ + RF IF  NL+R         +A HGI +F+DL+  EF++ Y G + 
Sbjct: 47  EYNKKYDSKEKEE-RFKIFVNNLKRINDLNHKSTNAVHGINKFTDLSKEEFKKFYTGFKP 105

Query: 126 KLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
                 D  + P   + ++  P  FDWR+KG V  VK+QG+CGSCW+FST G +E  N +
Sbjct: 106 DKSFLDDNIKKPSQLSFNITAPPAFDWRDKGVVTRVKNQGTCGSCWAFSTIGNVESVNAI 165

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
             G LV LSEQQLVDCD         S D  C+ GL ++A +Y L + G + E+ YPY G
Sbjct: 166 KHGNLVELSEQQLVDCD---------SKDEACDSGLPDNAQQY-LVSHGAISEQSYPYKG 215

Query: 244 TDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV--- 300
                 C +D S++   ++NF  V L E Q+A  L    PL++ I A  + TY  G+   
Sbjct: 216 --YAANCTYDSSQVVVRLSNFEKVVLSECQMAEKLYSTAPLSIVIAAEVLGTYTKGILVN 273

Query: 301 SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRN 358
            C    S+ L+H VLLVGYG+ G          +WI+KNSWG +WGE GY++I RG N
Sbjct: 274 ECEQ--SQDLNHAVLLVGYGNEG-------GTNFWILKNSWGTNWGEGGYFRIKRGVN 322


>gi|79314271|ref|NP_001030812.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
 gi|332644501|gb|AEE78022.1| thiol protease aleurain-like protein [Arabidopsis thaliana]
          Length = 357

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/360 (40%), Positives = 189/360 (52%), Gaps = 34/360 (9%)

Query: 11  VSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKF 67
           + L++F+A +S  +  D    I+ V+D   E+    E T   +LG   H   FS F  ++
Sbjct: 11  ILLILFAAAASKEIGFDESNPIKMVSDNLHEL----EDTVVQILGQSRHVLSFSRFTHRY 66

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
            K Y S EE   RF++FK NL       K   S    + QF+DLT  EF+R  LG  +  
Sbjct: 67  GKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAAQNC 126

Query: 128 RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
                        T  +P   DWRE G V PVK+QG CGSCW+FSTTGALE A   A GK
Sbjct: 127 SATLKGSHKITEAT--VPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGK 184

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
            +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG D G
Sbjct: 185 GISLSEQQLVDCAGTFN-------NFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG 237

Query: 248 HACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCP 303
             CKF    I   V    N ++ + DE + A  LV+  P++VA   V+  + Y  GV   
Sbjct: 238 --CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGVFTS 293

Query: 304 YICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
             C      ++H VL VGYG          + PYW+IKNSWG  WG+NGY+K+  G+N+C
Sbjct: 294 NTCGNTPMDVNHAVLAVGYGVE-------DDVPYWLIKNSWGGEWGDNGYFKMEMGKNMC 346


>gi|157093563|gb|ABV22436.1| cysteine proteinase [Oxyrrhis marina]
          Length = 329

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/312 (41%), Positives = 174/312 (55%), Gaps = 25/312 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLG 122
           FK KF ++Y  +EE   R  +F  N++          + T G+ QF+DLT  EF +TY+G
Sbjct: 22  FKAKFGESYNGEEEEAERKGVFAQNVQLINEENSKGHTYTLGVNQFADLTVEEFSKTYMG 81

Query: 123 LRRKLRLPKDADQAP--ILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
            ++  +   DA      +     LP   DW  +GAV PVK+QG CGSCWSFSTTG+LEGA
Sbjct: 82  FKKPAQKYGDAAYLGRHVYNGEALPTSVDWSSQGAVTPVKNQGQCGSCWSFSTTGSLEGA 141

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           N ++TGKLVSLSEQQ VDC            + GCNGGLM+SAF+Y  +A  L  E+ YP
Sbjct: 142 NEISTGKLVSLSEQQFVDCAGTYG-------NQGCNGGLMDSAFKYA-EANALCTEQSYP 193

Query: 241 YTGTD---RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQT 295
           Y GTD   +  +C    +K   SV+ +  VS D +Q   + V   P+++AI A     Q 
Sbjct: 194 YKGTDGSCQASSCSTGLAK--GSVSGYKDVSSDSEQDMMSAVAQQPVSIAIEADKSVFQL 251

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           Y GGV     C   LDHGVL VGYG+       L    YW +KNSWG +WG +GY  + R
Sbjct: 252 YSGGV-LTGACGASLDHGVLAVGYGT-------LSGTDYWKVKNSWGSTWGMSGYVLLQR 303

Query: 356 GRNVCGVDSMVS 367
           G+   G   ++S
Sbjct: 304 GKGGSGECGLLS 315


>gi|6967097|emb|CAB72480.1| cysteine protease-like protein [Arabidopsis thaliana]
          Length = 377

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 145/360 (40%), Positives = 189/360 (52%), Gaps = 34/360 (9%)

Query: 11  VSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKF 67
           + L++F+A +S  +  D    I+ V+D   E+    E T   +LG   H   FS F  ++
Sbjct: 11  ILLILFAAAASKEIGFDESNPIKMVSDNLHEL----EDTVVQILGQSRHVLSFSRFTHRY 66

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
            K Y S EE   RF++FK NL       K   S    + QF+DLT  EF+R  LG  +  
Sbjct: 67  GKKYQSVEEMKLRFSVFKENLDLIRSTNKKGLSYKLSLNQFADLTWQEFQRYKLGAAQNC 126

Query: 128 RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
                        T  +P   DWRE G V PVK+QG CGSCW+FSTTGALE A   A GK
Sbjct: 127 SATLKGSHKITEAT--VPDTKDWREDGIVSPVKEQGHCGSCWTFSTTGALEAAYHQAFGK 184

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
            +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG D G
Sbjct: 185 GISLSEQQLVDCAGTFN-------NFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTGKDGG 237

Query: 248 HACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCP 303
             CKF    I   V    N ++ + DE + A  LV+  P++VA   V+  + Y  GV   
Sbjct: 238 --CKFSAKNIGVQVRDSVNITLGAEDELKHAVGLVR--PVSVAFEVVHEFRFYKKGVFTS 293

Query: 304 YICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
             C      ++H VL VGYG          + PYW+IKNSWG  WG+NGY+K+  G+N+C
Sbjct: 294 NTCGNTPMDVNHAVLAVGYGVE-------DDVPYWLIKNSWGGEWGDNGYFKMEMGKNMC 346


>gi|145334857|ref|NP_001078774.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|332009932|gb|AED97315.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 361

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/345 (40%), Positives = 181/345 (52%), Gaps = 34/345 (9%)

Query: 27  DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTI 83
           D    IR V+DG  E+    E + + +LG   H   F+ F  ++ K Y + EE   RF+I
Sbjct: 27  DESNPIRMVSDGLREV----EESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSI 82

Query: 84  FKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND 143
           FK NL       K   S   G+ QF+DLT  EF+RT LG  +             +    
Sbjct: 83  FKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHK--VTEAA 140

Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
           LP   DWRE G V PVKDQG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    
Sbjct: 141 LPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAF 200

Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN 263
           +       + GCNGGL + AFEY    GGL  E+ YPYTG D    CKF    +   V N
Sbjct: 201 N-------NYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDE--TCKFSAENVGVQVLN 251

Query: 264 FSVVSL---DEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLL 316
              ++L   DE + A  LV+  P+++A   ++  + Y  GV     C      ++H VL 
Sbjct: 252 SVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLA 309

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 361
           VGYG            PYW+IKNSWG  WG+ GY+K+  G+N+CG
Sbjct: 310 VGYGVEDGV-------PYWLIKNSWGADWGDKGYFKMEMGKNMCG 347


>gi|301784869|ref|XP_002927853.1| PREDICTED: cathepsin F-like [Ailuropoda melanoleuca]
          Length = 394

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/350 (42%), Positives = 196/350 (56%), Gaps = 38/350 (10%)

Query: 34  QVTDGGDEILS------HHESTNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIF 84
           +VTD  +E LS      + E    D   +    S+FK+    +N+ Y S+EE + R ++F
Sbjct: 64  KVTDDKNETLSSVLPLLNKEPLPQDF--SVRMVSIFKEFVTTYNRTYESKEEAEWRMSVF 121

Query: 85  KANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND 143
             N+ RA + Q LD  +A +GIT+FSDLT  EFR  YL    +    K  D A  +  + 
Sbjct: 122 SNNVMRAQKIQALDRGTAQYGITKFSDLTEEEFRTIYLNPLLRENRGKKMDLAKSI-GDS 180

Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
            P ++DWR KGAV  VKDQG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DCD   
Sbjct: 181 APPEWDWRNKGAVTQVKDQGMCGSCWAFSVTGNVEGQWFLKRGALLSLSEQELLDCDK-- 238

Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHA--CKFDKSKIAASV 261
                   D  C GGL ++A+      GGL  E+DY Y    RGH   C F   K    +
Sbjct: 239 -------VDKACLGGLPSNAYSAIKTLGGLETEDDYSY----RGHVQTCSFSSKKARVYI 287

Query: 262 ANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRRL-DHGVLLVG 318
            +   +S +E ++ A L +NGP++VAINA  MQ Y  G+S P   +CS  L DH VLLVG
Sbjct: 288 NDSVELSQNEQKLVAWLAQNGPISVAINAFGMQFYRRGISHPLRPLCSPWLIDHAVLLVG 347

Query: 319 YGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           YG+           P+W IKNSWG  WGE GYY + RG   CGV++M S+
Sbjct: 348 YGNRSGI-------PFWAIKNSWGTDWGEEGYYYLHRGSGACGVNTMASS 390


>gi|444510192|gb|ELV09527.1| Cathepsin F [Tupaia chinensis]
          Length = 597

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 148/378 (39%), Positives = 205/378 (54%), Gaps = 43/378 (11%)

Query: 9   FLVSLVVFSAVSSGTLID-DVDQLIRQVTDGGDE-------ILSHHESTNNDLLGAEHHF 60
            L S  V   +    L+  D   ++ +VTD G+E       +L+    + +  +     F
Sbjct: 241 LLCSFEVLDELGKHMLLRRDCGPVVTKVTDDGNEALNSGLPLLTKDPLSQDFSVKMASIF 300

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRT 119
             F   +N+ Y ++EE   R ++F +N+ RA + Q LD  +A +G+T+FSDLT  EFR  
Sbjct: 301 KNFVTTYNRTYQTKEEAQWRLSVFASNMVRAQKIQALDHGTAQYGVTKFSDLTEEEFRTI 360

Query: 120 YLG--LR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           YL   LR    +K+ L K          +  P ++DWR+ GAV  VKDQG CGSCW+FS 
Sbjct: 361 YLNPLLREVPGKKMHLAKSIG-------DPAPPEWDWRKNGAVTKVKDQGMCGSCWAFSV 413

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL
Sbjct: 414 TGNVEGQWFLNRGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYSAIKNLGGL 464

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             E+DY Y G     AC F   K    + +   +S +E ++AA L K GP++VAINA  M
Sbjct: 465 ETEDDYSYQG--HMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGM 522

Query: 294 QTYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y  G++ P   +CS  L DH VL+VGYG+         E P+W IKNSWG  WGE GY
Sbjct: 523 QFYRHGIAHPLRPLCSPWLIDHAVLIVGYGNRS-------EVPFWAIKNSWGTDWGEKGY 575

Query: 351 YKICRGRNVCGVDSMVST 368
           Y + RG   CGV++M S+
Sbjct: 576 YYLHRGSGSCGVNTMASS 593


>gi|77379397|gb|ABA71355.1| cysteine protease [Brassica napus]
          Length = 359

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/378 (38%), Positives = 196/378 (51%), Gaps = 35/378 (9%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVD-QLIRQVTDGGDEILSHHESTNNDLLGAEHH 59
           M S   +L  V+L++  AVS+   I   +   IR V D   E+    E +   +LG   H
Sbjct: 1   MMSVRTILPSVALLILIAVSTAESIGFYESNPIRMVFDRLLEV----EESVVQILGQTRH 56

Query: 60  ---FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
              F+ F  ++ K Y + EE   RF+IFK NL       K   S   G+ QF+D+T  EF
Sbjct: 57  VLSFARFTHRYGKRYENAEEMKLRFSIFKENLDLIRSTNKKGLSYKLGVNQFTDMTWQEF 116

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           +RT LG  +             L    LP   DWRE G V PVKDQG CGSCW+FSTTGA
Sbjct: 117 QRTKLGAAQNCSATLKGTHK--LTGEALPETKDWREDGIVSPVKDQGGCGSCWTFSTTGA 174

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LE A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  E
Sbjct: 175 LEAAYHQAFGKGISLSEQQLVDCAGAFN-------NYGCNGGLPSQAFEYIKSNGGLDTE 227

Query: 237 EDYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY- 292
           E YPYTG D    CK+    +   V    N ++ + DE + A  L++  P+++A   ++ 
Sbjct: 228 EAYPYTGED--GTCKYSAENVGVQVLDSVNITLGAEDELKHAVGLLR--PVSIAFEVIHS 283

Query: 293 MQTYIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
            + Y  GV     C +    ++H VL VGYG            PYW+IKNSWG  WG+ G
Sbjct: 284 FRLYKSGVYSDSHCGQTPMDVNHAVLAVGYGIE-------DGVPYWLIKNSWGADWGDKG 336

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+K+  G+N+CG+ +  S
Sbjct: 337 YFKMEMGKNMCGIATCAS 354


>gi|320164780|gb|EFW41679.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 334

 Score =  223 bits (567), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/318 (40%), Positives = 175/318 (55%), Gaps = 25/318 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD-PSATHGITQFSDLTPAEFR 117
            F  +K+ F K+Y+   E  +R  +++AN      H      S T G+  F+DLT  EF+
Sbjct: 29  EFEAWKRTFGKSYSDAVEEINRRAVWEANKMLVDAHNGAGIHSYTLGMNIFADLTHEEFK 88

Query: 118 RTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           R YLG +  L  P+    +  +PT +   LP   DWR  G V PVKDQG CGSCWSFSTT
Sbjct: 89  RFYLGTKVDLNRPRSNFSSTFIPTANVGALPDSVDWRTAGIVTPVKDQGQCGSCWSFSTT 148

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G++EG +   TG+LVSLSEQ LVDC            + GCNGGLM+ AF+Y +   G+ 
Sbjct: 149 GSVEGQHARKTGQLVSLSEQNLVDCSK-------AQGNQGCNGGLMDDAFQYIITNKGID 201

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAV-- 291
            E  YPYT  D    CKF+ + + A++++F  ++   +    N V   GP++VAI+A   
Sbjct: 202 TEASYPYTAKD--GTCKFNAANVGATLSSFQDITRGSESDLQNAVATVGPVSVAIDASKN 259

Query: 292 YMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             Q Y  GV     CS   LDHGVL  GYG++          PYW++KNSWG SWG+ GY
Sbjct: 260 SFQLYTSGVYNEKKCSSTSLDHGVLAAGYGTS-------NGTPYWLVKNSWGSSWGQAGY 312

Query: 351 YKICR-GRNVCGVDSMVS 367
             + R   N CG+ +  S
Sbjct: 313 IWMSRNANNQCGIATSAS 330


>gi|405971604|gb|EKC36431.1| Cathepsin L [Crassostrea gigas]
          Length = 384

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 179/322 (55%), Gaps = 29/322 (9%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLT 112
           E  +  FK   +K+Y   EE   RF IF+ N+ R  +H KL      S   G+ QF+DL 
Sbjct: 76  EQAWKEFKILHDKSYEDHEEESRRFEIFRENVLRIEKHNKLFHLGKKSYYLGVNQFTDLE 135

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
            AEF   + GL  K+    +   +  L  N++  P   DWR KG V  VK+QG+CGSCW+
Sbjct: 136 YAEFV-NFNGL--KMTNLNNTKCSSHLSANNIVVPDSVDWRSKGYVTKVKNQGACGSCWA 192

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FS TG+LEG  F   GKLV LSE QLVDC      E       GCNGG M +AF+Y    
Sbjct: 193 FSATGSLEGQYFRKNGKLVPLSESQLVDCSGSFGNE-------GCNGGFMENAFKYVKSV 245

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAIN 289
           GG+  E DYPY    R   C FDK+K+ A+V+    V S  E  +   + + GP++VAI+
Sbjct: 246 GGIESESDYPYKARQR--TCAFDKTKVIATVSGCVDVESGSESSLKEVVSEVGPVSVAID 303

Query: 290 AVY--MQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y GGV    +CS  RL+HGVL VGYG++      L+ K YWI+KNSWG  WG
Sbjct: 304 AGHSSFQLYAGGVYDEPLCSTSRLNHGVLCVGYGTS------LQGKDYWIVKNSWGVRWG 357

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
             GY K+ R + N CG+ S  S
Sbjct: 358 VEGYIKMSRNKNNQCGIASEAS 379


>gi|154336052|ref|XP_001564262.1| cysteine peptidase A (CPA) [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061296|emb|CAM38321.1| cysteine peptidase A (CPA) [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 479

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 172/311 (55%), Gaps = 24/311 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSDLTPA 114
           A  HF  FKK+  K++  +    HRF  FK N++ A      +P A + ++ +F+ LTP 
Sbjct: 38  ASAHFMHFKKQHGKSFGEEAVEGHRFNAFKENMQTAVYLNAQNPHAHYDVSGKFAALTPQ 97

Query: 115 EFRRTYLG---LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           EF + YL      R+L+  K+           L A  DWREKGAV  VKDQG CGSCW+F
Sbjct: 98  EFAKQYLNPDYYTRQLKAHKERAHVYEGVRGGLSA-VDWREKGAVTEVKDQGLCGSCWAF 156

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK-- 229
           S  G +EG   L+   LVSLSEQ LV CD         + D GCNGGLM+ A+ + +K  
Sbjct: 157 SAIGNIEGQWALSGNTLVSLSEQMLVSCD---------TVDMGCNGGLMDQAWAWIIKNH 207

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
           +G +  E  YPYT  D   A      K+ A ++    +  DED I A L KNGP+++A++
Sbjct: 208 SGAVYTEVSYPYTSGDGSTASCLSTGKVGARISGQVSLPQDEDAIEAWLEKNGPISIAVD 267

Query: 290 AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           A   Q Y GGV      +  L+HGVLLVGY ++          PYWI+KNSWG SWGE+G
Sbjct: 268 ATTWQLYFGGVVSNCF-AYNLNHGVLLVGYNNSA-------NPPYWIVKNSWGTSWGEHG 319

Query: 350 YYKICRGRNVC 360
           Y ++ +G N C
Sbjct: 320 YIRLAKGSNQC 330


>gi|328870281|gb|EGG18656.1| hypothetical protein DFA_04151 [Dictyostelium fasciculatum]
          Length = 347

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 128/323 (39%), Positives = 175/323 (54%), Gaps = 28/323 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRR------AARHQKLDPSATHGITQFSD 110
           E  F  F+ K+NK Y S E    +   FK +L+R       A+  K+D     G+ +F+D
Sbjct: 27  ETQFREFQLKYNKHYESHE-FAQKLATFKNSLKRIQELNDMAKRAKVDTE--FGVNKFAD 83

Query: 111 LTPAEFRRTYLGLRRKLRLPKDADQAPILP---TNDLPADFDWREKGAVGPVKDQGSCGS 167
           L+  EF   YL  +  +        AP       ++LP  FDWR +GAV PVKDQG CGS
Sbjct: 84  LSKEEFANYYLN-KGGMESTDSETYAPDYSDKEISNLPTSFDWRTQGAVTPVKDQGQCGS 142

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CWSFSTTG +EG  FLA   L  LSEQ LVDC  + D         GCNGGLM  A++Y 
Sbjct: 143 CWSFSTTGNVEGQWFLAGNDLTGLSEQNLVDCSTKND---------GCNGGLMPLAYDYI 193

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
           ++  G+  E  YPY    + + C+F+ + I A +  +  VS +E Q+  NLV NGPL++A
Sbjct: 194 VENNGIDTEASYPYLAIQQKN-CQFNPANIGAKIDGYYNVSSNETQMQINLVNNGPLSIA 252

Query: 288 INAVYMQTYIGGVSCPY--ICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
            +A   Q Y  G+      IC + LDHG+L+VGYG           + +WIIKNSW   W
Sbjct: 253 ADAAEWQYYKKGIFSGIFGICGKNLDHGILIVGYGQ---QTTEFGTELFWIIKNSWSTDW 309

Query: 346 GENGYYKICRGRNVCGVDSMVST 368
           G +G+  I RG   CG++  V++
Sbjct: 310 GLSGFMLIKRGTGECGINLAVTS 332


>gi|224131910|ref|XP_002328138.1| predicted protein [Populus trichocarpa]
 gi|222837653|gb|EEE76018.1| predicted protein [Populus trichocarpa]
          Length = 349

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/306 (42%), Positives = 174/306 (56%), Gaps = 25/306 (8%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR 128
           KAY S EE  HRF +FK NL+   +  K   S   G+ +F+DL+  EF+  +LGL  +  
Sbjct: 56  KAYNSLEEKLHRFEVFKENLKHIDQRNKEVTSYWLGLNEFADLSHEEFKSKFLGLYPEFP 115

Query: 129 LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKL 188
             K ++        DLP   DWR+KGAV PVK+QGSCGSCW+FST  A+EG N +  G L
Sbjct: 116 RKKSSEDFSYRDVVDLPKSIDWRKKGAVTPVKNQGSCGSCWAFSTVAAVEGINQIVAGNL 175

Query: 189 VSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGH 248
            SLSEQQL+DCD         S ++GCNGGLM+ AFE+ +  GGL +EEDYPY   + G 
Sbjct: 176 TSLSEQQLIDCD--------TSFNNGCNGGLMDYAFEFIVNNGGLHKEEDYPYL-MEEGT 226

Query: 249 ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGV-SCPYI 305
             +  +     +++ +  V  +++Q     + + PL+VAI+A     Q Y GGV S P  
Sbjct: 227 CDEKREEMEVVTISGYHDVPRNDEQSLLKALAHQPLSVAIDASGRDFQFYSGGVFSGP-- 284

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG----RNVCG 361
           C   LDHGV  VGYGS+           Y I+KNSWG  WGE GY ++ R       +CG
Sbjct: 285 CGTDLDHGVAAVGYGSSSGI-------DYIIVKNSWGPKWGERGYLRMKRNTGKPEGLCG 337

Query: 362 VDSMVS 367
           ++ M S
Sbjct: 338 INKMAS 343


>gi|356530431|ref|XP_003533785.1| PREDICTED: cysteine proteinase [Glycine max]
          Length = 354

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 136/315 (43%), Positives = 172/315 (54%), Gaps = 27/315 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F+ F  +F K+Y S+EE   R+ IF  NLR    H K     T  +  F+D T  EF+R 
Sbjct: 55  FARFVSRFGKSYQSEEEMKERYEIFSQNLRFIRSHNKKRLPYTLSVNHFADWTWEEFKRH 114

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
            LG  +      + +    L    LP   DWR++G V  VKDQGSCGSCW+FSTTGALE 
Sbjct: 115 RLGAAQNCSATLNGNHK--LTDAVLPPTKDWRKEGIVSSVKDQGSCGSCWTFSTTGALEA 172

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
           A   A GK +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE Y
Sbjct: 173 AYAQAFGKSISLSEQQLVDCAGPFN-------NFGCHGGLPSQAFEYIKYNGGLETEEAY 225

Query: 240 PYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQT 295
           PYTG D    CKF    +A  V    N ++ + DE + A   V+  P++VA   V     
Sbjct: 226 PYTGKD--GVCKFSAENVAVQVLDSVNITLGAEDELKHAVAFVR--PVSVAFQVVNGFHF 281

Query: 296 YIGGVSCPYIC---SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Y  GV     C   S+ ++H VL VGYG            PYW+IKNSWGESWGENGY+K
Sbjct: 282 YENGVFTSDTCGSTSQDVNHAVLAVGYGVENGV-------PYWLIKNSWGESWGENGYFK 334

Query: 353 ICRGRNVCGVDSMVS 367
           +  G+N+CGV +  S
Sbjct: 335 MELGKNMCGVATCAS 349


>gi|261328618|emb|CBH11596.1| cysteine peptidase precursor, (fragment) [Trypanosoma brucei
           gambiense DAL972]
          Length = 404

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/313 (41%), Positives = 174/313 (55%), Gaps = 35/313 (11%)

Query: 67  FNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR------TY 120
           + K Y   +E   RF  F+ N+ +A      +P AT G+T FSD+T  EFR       +Y
Sbjct: 2   YGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASY 61

Query: 121 LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
               +K RL K  +    + T   PA  DWREKGAV P+KDQG CGSCW+F + G +EG 
Sbjct: 62  FAAAQK-RLRKTVN----VTTGRAPAAVDWREKGAVTPMKDQGQCGSCWAFYSIGNIEGQ 116

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMREED 238
             +A   LVSLSEQ LV CD         + D GC GGLM++AF + + +  G +  E  
Sbjct: 117 WQVAGNPLVSLSEQMLVSCD---------TIDFGCGGGLMDNAFNWIVNSNGGNVFTEAS 167

Query: 239 YPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           YPY +G      C+ +  +I A++ +   +  DED IAA L +NGPLA+A++A     Y 
Sbjct: 168 YPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPLAIAVDATSFMDYN 227

Query: 298 GGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GG+  SC    S +LDHGVLLVGY             PYWIIKNSW   WGE+GY +I +
Sbjct: 228 GGILTSCT---SEQLDHGVLLVGYNDN-------SNPPYWIIKNSWSNMWGEDGYIRIEK 277

Query: 356 GRNVCGVDSMVST 368
           G N C ++  VS+
Sbjct: 278 GTNQCLMNQAVSS 290


>gi|79331505|ref|NP_001032106.1| thiol protease aleurain [Arabidopsis thaliana]
 gi|332009931|gb|AED97314.1| thiol protease aleurain [Arabidopsis thaliana]
          Length = 357

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/344 (40%), Positives = 180/344 (52%), Gaps = 34/344 (9%)

Query: 27  DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTI 83
           D    IR V+DG  E+    E + + +LG   H   F+ F  ++ K Y + EE   RF+I
Sbjct: 27  DESNPIRMVSDGLREV----EESVSQILGQSRHVLSFARFTHRYGKKYQNVEEMKLRFSI 82

Query: 84  FKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND 143
           FK NL       K   S   G+ QF+DLT  EF+RT LG  +             +    
Sbjct: 83  FKENLDLIRSTNKKGLSYKLGVNQFADLTWQEFQRTKLGAAQNCSATLKGSHK--VTEAA 140

Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
           LP   DWRE G V PVKDQG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    
Sbjct: 141 LPETKDWREDGIVSPVKDQGGCGSCWTFSTTGALEAAYHQAFGKGISLSEQQLVDCAGAF 200

Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN 263
           +       + GCNGGL + AFEY    GGL  E+ YPYTG D    CKF    +   V N
Sbjct: 201 N-------NYGCNGGLPSQAFEYIKSNGGLDTEKAYPYTGKDE--TCKFSAENVGVQVLN 251

Query: 264 FSVVSL---DEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLL 316
              ++L   DE + A  LV+  P+++A   ++  + Y  GV     C      ++H VL 
Sbjct: 252 SVNITLGAEDELKHAVGLVR--PVSIAFEVIHSFRLYKSGVYTDSHCGSTPMDVNHAVLA 309

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
           VGYG            PYW+IKNSWG  WG+ GY+K+  G+N+C
Sbjct: 310 VGYGVEDGV-------PYWLIKNSWGADWGDKGYFKMEMGKNMC 346


>gi|77628008|ref|NP_001029282.1| cathepsin F precursor [Rattus norvegicus]
 gi|71681040|gb|AAH99780.1| Cathepsin F [Rattus norvegicus]
 gi|149062007|gb|EDM12430.1| cathepsin F, isoform CRA_a [Rattus norvegicus]
 gi|159895422|gb|ABX09995.1| cathepsin F [Rattus norvegicus]
          Length = 462

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/320 (44%), Positives = 184/320 (57%), Gaps = 37/320 (11%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R T+F  N+ RA + Q LD  +A +GIT+FSDLT  EF  
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHT 224

Query: 119 TYLG--LRR----KLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSF 171
            YL   L++    K+ L K          NDL P ++DWR+KGAV  VKDQG CGSCW+F
Sbjct: 225 IYLNPLLQKESGGKMSLAKS--------INDLAPPEWDWRKKGAVTEVKDQGMCGSCWAF 276

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      G
Sbjct: 277 SVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KMDKACMGGLPSNAYTAIKNLG 327

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  E+DY Y G     AC F        + +   +S DE++IAA L + GP++VAINA 
Sbjct: 328 GLETEDDYGYQG--HVQACNFSTQMAKVYINDSVELSRDENKIAAWLAQKGPISVAINAF 385

Query: 292 YMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            MQ Y  G++ P+  +CS   +DH VLLVGYG+           PYW IKNSWG  WGE 
Sbjct: 386 GMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGRDWGEE 438

Query: 349 GYYKICRGRNVCGVDSMVST 368
           GYY + RG   CGV++M S+
Sbjct: 439 GYYYLYRGSGACGVNTMASS 458


>gi|395851695|ref|XP_003798388.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Otolemur garnettii]
          Length = 491

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 185/321 (57%), Gaps = 37/321 (11%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R +IF  N+ RA + Q LD  +A +GIT+FSDLT  EFR 
Sbjct: 194 FKNFLTTYNRTYESKEETQWRLSIFINNMVRAQKIQALDQGTARYGITKFSDLTEEEFRT 253

Query: 119 TYLG--LR----RKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSF 171
            YL   LR    +K+R+ K        P  D  P ++DWR KGAV  VK+QG CGSCW+F
Sbjct: 254 IYLNPLLREDPGKKMRVAK--------PVGDPAPPEWDWRNKGAVTNVKNQGMCGSCWAF 305

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      G
Sbjct: 306 SVTGNVEGQWFLKQGTLLSLSEQELLDCDK---------MDKACLGGLPSNAYSAIKNLG 356

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  EEDY Y G  +  AC F   K    + +   +S +E ++AA L K GP++VAINA 
Sbjct: 357 GLETEEDYSYQG--QMQACNFSAEKAKVYINDSVELSHNEQKLAAWLAKKGPISVAINAF 414

Query: 292 YMQTYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            MQ Y  G+S P   +C+  L DH VL+VGYG+         + P+W IKNSWG  WGE 
Sbjct: 415 GMQFYRHGISRPLRPLCTPWLIDHAVLIVGYGNR-------SDIPFWAIKNSWGTDWGEQ 467

Query: 349 GYYKICRGRNVCGVDSMVSTV 369
           GYY + RG   CGV++M S+ 
Sbjct: 468 GYYYLHRGSGACGVNTMASSA 488


>gi|224103643|ref|XP_002313136.1| predicted protein [Populus trichocarpa]
 gi|222849544|gb|EEE87091.1| predicted protein [Populus trichocarpa]
          Length = 477

 Score =  222 bits (566), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 182/320 (56%), Gaps = 30/320 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRR 118
           + ++  K+ KAY +  E + RF IFK NL+   +H  + +PS   G+ +F+DL+  E+R 
Sbjct: 49  YEMWLVKYGKAYNALGEKERRFEIFKDNLKFVDQHNSVGNPSYKLGLNKFADLSNEEYRA 108

Query: 119 TYLGLR-----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
            YLG R     R L  PK A +      +DLP   DWREKGAV PVKDQG CGSCW+FST
Sbjct: 109 AYLGTRMDGKRRLLGGPKSA-RYLFKDGDDLPESVDWREKGAVAPVKDQGQCGSCWAFST 167

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
            GA+EG N + TG L SLSEQ+LVDCD           + GCNGGLM+ AFE+ +K GG+
Sbjct: 168 VGAVEGINQIVTGNLTSLSEQELVDCDK--------VYNQGCNGGLMDYAFEFIMKNGGI 219

Query: 234 MREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA-- 290
             EEDYPY   D    C  + K+    ++  +  V  ++++     V N P++VAI A  
Sbjct: 220 DTEEDYPYKAVD--SMCDPNRKNARVVTIDGYEDVPQNDEKSLRKAVANQPVSVAIEAGG 277

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
              Q Y  GV     C  +LDHGV+ VGYG+            YW+++NSWG +WGENGY
Sbjct: 278 RAFQLYQSGVFTG-SCGTQLDHGVVAVGYGTENGV-------DYWVVRNSWGPAWGENGY 329

Query: 351 YKICRGRNVCGVDSMVSTVA 370
            ++   RNV   ++    +A
Sbjct: 330 IRM--ERNVASTETGKCGIA 347


>gi|397517049|ref|XP_003828732.1| PREDICTED: cathepsin F [Pan paniscus]
          Length = 379

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 139/314 (44%), Positives = 181/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 82  FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 141

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 142 IYLNPLLRKEPGNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 199

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 200 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 250

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +  V+S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 251 DYSYQG--HMQSCNFSAEKAKVYINDSVVLSQNEQKLAAWLAKRGPISVAINAFGMQFYR 308

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 309 HGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLH 361

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 362 RGSGACGVNTMASS 375


>gi|14041143|emb|CAA71554.1| cathepsin [Geodia cydonium]
          Length = 322

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/316 (41%), Positives = 177/316 (56%), Gaps = 27/316 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           +  +K K+NK Y+SQEE   R  ++ +NL+            T  + +F+DL P EF   
Sbjct: 19  WEQWKLKYNKQYSSQEEDYLRQRVWLSNLKFVEEFDSEREGYTVAMNEFADLDPREFVSH 78

Query: 120 YLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           Y GLRR+   P  +   P     D   LP   DWR KG V  VK+QG CGSCW+FS TG+
Sbjct: 79  YNGLRRR---PHTSSGEPCTLGEDVSALPTTVDWRTKGYVTGVKNQGQCGSCWAFSATGS 135

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LEG +F ATGKLVSLSEQ LVDC            + GCNGGL + AF+Y +K GG+  E
Sbjct: 136 LEGQHFNATGKLVSLSEQNLVDC-------SSAEGNEGCNGGLPDDAFKYVIKNGGIDTE 188

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYM-- 293
             YPY   D    C +  + I ++ +++  + S  E Q+       GP+ V I+A ++  
Sbjct: 189 ASYPYVARDE--KCHYSSANIGSTCSSYVDIESKSEAQLQVASATVGPIPVGIDASHLGF 246

Query: 294 QTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y GGV    +CS+ RLDHGVL+VGYG         KEK YW++KNSWG +WG +G   
Sbjct: 247 QLYDGGVYHSDLCSQTRLDHGVLVVGYGV-------YKEKDYWMVKNSWGTNWGISGDMM 299

Query: 353 ICRGR-NVCGVDSMVS 367
           + R R N CG+ +M S
Sbjct: 300 MSRNRDNNCGIATMAS 315


>gi|343474734|emb|CCD13687.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 524

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/323 (38%), Positives = 179/323 (55%), Gaps = 27/323 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK ++ RA      +P AT G+TQFSD++P EF
Sbjct: 117 QQQFAAFKQKYSRSYKDATEEAFRFRMFKQSMERAKEEAAANPYATFGVTQFSDMSPEEF 176

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TYL G +      K   +   + T   P   DWR+KGAV PVKDQGSCGSCW+F+  G
Sbjct: 177 RATYLNGAKYYAAALKRPRKVVNVSTGKAPPAVDWRKKGAVTPVKDQGSCGSCWAFAAIG 236

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD         + +  C GG  + AF++ + +  G +
Sbjct: 237 NIEGQWKIAGHELTSLSEQMLVSCD---------TTEDNCGGGFADRAFKWIVSSNKGNV 287

Query: 234 MREEDYPYTGTDRGHACKFDKSK--IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E  YPY   D G+    +KS   + A ++    +  DE+ IA  L +NGP+A+A++A 
Sbjct: 288 FTERSYPYASID-GYVPPCNKSGKVVGAKISGHINLPKDENAIAEWLARNGPVAIAVDAS 346

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
               Y GGV  SC    S+ ++H VLLVGY           + PYWIIKNSW + WGE G
Sbjct: 347 TFLDYKGGVLTSC---SSKHVNHEVLLVGYNDTS-------KPPYWIIKNSWDKEWGEEG 396

Query: 350 YYKICRGRNVCGVDSMVSTVAAA 372
           Y +I +G N+C +     +V  +
Sbjct: 397 YIRIEKGTNLCLMKEYARSVVVS 419


>gi|297791625|ref|XP_002863697.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297309532|gb|EFH39956.1| hypothetical protein ARALYDRAFT_917391 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 463

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 140/353 (39%), Positives = 192/353 (54%), Gaps = 30/353 (8%)

Query: 6   VVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGD-EILSHHESTNNDLLGAEHHFSLFK 64
           ++L L  + V  A+    +  D +  I  V+   D E+   +E+        EH     K
Sbjct: 9   MILLLAMIGVSYAIDMSIISYDENHHISTVSSRSDAEVERIYEA-----WMVEHG----K 59

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
           KK N+     E+ D RF IFK NLR    H   + S   G+T+F+DLT  E+R  YLG +
Sbjct: 60  KKMNQNGLGAEK-DQRFEIFKDNLRYIDEHNTKNLSYKLGLTRFADLTNDEYRSMYLGAK 118

Query: 125 RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
              R+ K +D+      + LP   DWR++GAV  VKDQGSCGSCW+FST GA+EG N + 
Sbjct: 119 PVKRVLKTSDRYEARVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKIV 178

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  E DYPY   
Sbjct: 179 TGDLISLSEQELVDCDT--------SYNQGCNGGLMDYAFEFIIKNGGIDTEADYPYKAA 230

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSC 302
           D G   +  K+    ++ ++  V  + +      + + P++VAI A     Q Y  GV  
Sbjct: 231 D-GRCDQNRKNAKVVTIDSYEDVPENSEASLKKALAHQPISVAIEAGGRAFQLYSSGVF- 288

Query: 303 PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
             IC   LDHGV+ VGYG+          K YWI++NSWG  WGE+GY K+ R
Sbjct: 289 DGICGTELDHGVVAVGYGTE-------NGKDYWIVRNSWGNRWGESGYIKMAR 334


>gi|426252094|ref|XP_004019753.1| PREDICTED: cathepsin F isoform 1 [Ovis aries]
          Length = 460

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 181/321 (56%), Gaps = 39/321 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y SQEE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 163 FKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 222

Query: 119 TYLG--LR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            YL   L+    R +RL +     P       P  +DWR KGAV  VKDQG CGSCW+FS
Sbjct: 223 IYLNPLLKDAPGRNMRLAQPVTDVP-------PPQWDWRNKGAVTDVKDQGMCGSCWAFS 275

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GG
Sbjct: 276 VTGNVEGQWFLKRGTLLSLSEQELLDCDK---------TDKACLGGLPSNAYSAIRTLGG 326

Query: 233 LMREEDYPYTGTDRGH--ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           L  E+DY Y    RGH   C F   K    + +   +S +E ++AA L K GP++VAINA
Sbjct: 327 LETEDDYSY----RGHLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKKGPISVAINA 382

Query: 291 VYMQTYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
             MQ Y  G+S P   +CS  L DH VLLVGYG+           P+W IKNSWG +WGE
Sbjct: 383 FGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRS-------ATPFWAIKNSWGTNWGE 435

Query: 348 NGYYKICRGRNVCGVDSMVST 368
            GYY + RG   CGV+ M S+
Sbjct: 436 EGYYYLHRGSGACGVNIMASS 456


>gi|154332647|ref|XP_001562140.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134059588|emb|CAM37170.1| cathepsin L-like protease [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 441

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/312 (42%), Positives = 172/312 (55%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + + YA+ +E   R   F+ NL     HQ  +P A  GIT+F DL+  EF   
Sbjct: 38  FEEFKQTYQRVYATLDEEQQRLANFQRNLELMREHQANNPHARFGITKFFDLSEEEFATR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G     +  K A Q       DL   PA  DWREKGAV PVKDQG CGSCW+FS  G
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTAPAAVDWREKGAVTPVKDQGMCGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGGL 233
            +E   +LAT  L+SLSEQ+LV CD           D GCNGGLM  AF++ L  + G +
Sbjct: 158 NIESQWYLATHSLISLSEQELVSCD---------DVDEGCNGGLMLQAFDWLLNNRNGAV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
                YPY  +  G   +  +S    I A +     +  +ED +AA L  NGP+A+A++A
Sbjct: 209 YTGVSYPYV-SGNGSVPECSESSDLVIGAYIDGHVTIESNEDTMAAWLAANGPIAIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y GGV  SC     ++L+HGVLLVGY   G       E PYW+IKNSWG++WGE 
Sbjct: 268 SAFMSYTGGVLTSCD---GKQLNHGVLLVGYNMTG-------EVPYWLIKNSWGKNWGEK 317

Query: 349 GYYKICRGRNVC 360
           GY ++ +G N C
Sbjct: 318 GYVRVRKGTNEC 329


>gi|74229834|gb|AAU14993.2| cysteine proteinase [Cryptobia salmositica]
          Length = 443

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 185/325 (56%), Gaps = 33/325 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F  FK    + YAS +E   RF IF  N+++AA   + +P AT G  +F+D+T  EF
Sbjct: 22  EVLFGNFKAAHARNYASPDEERKRFEIFAGNMKKAAVLNRKNPMATFGPNEFADMTSEEF 81

Query: 117 RRTY----LGLRRKLRLPKDADQAPILPTNDLPA----DFDWREKGAVGPVKDQGSCGSC 168
           +  +         K R PK+          ++ A      DWR KGAV PVK+QG+CGSC
Sbjct: 82  QTRHNAARHYAAAKARPPKNTK---TFTAEEIKAAVGQQIDWRLKGAVTPVKNQGACGSC 138

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           WSFSTTG +EG + +ATG+LV++SEQ+LV CD           D GCNGGLM++AF + +
Sbjct: 139 WSFSTTGNIEGQHAIATGQLVAVSEQELVSCD---------PIDDGCNGGLMDNAFGWLI 189

Query: 229 KA--GGLMREEDYPY-TGTDRGHACKF--DKSKIAASVANFSVVSLDEDQIAANLVKNGP 283
            A  G +  E +YPY +G     AC    +   + A+++ F  ++  E+ +AA + K+GP
Sbjct: 190 SAHKGQIATEANYPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEEDMAAFVFKHGP 249

Query: 284 LAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           L++ ++A   Q+Y GG+   Y    ++DHGVL+VG+             PYWIIKNSW  
Sbjct: 250 LSIGVDASTWQSYAGGIM-SYCPQDQIDHGVLIVGFDDTA-------STPYWIIKNSWTA 301

Query: 344 SWGENGYYKICRGRNVCGVDSMVST 368
           +WGE GY ++ +G N CG+ S  S+
Sbjct: 302 NWGEEGYIRVAKGSNQCGLTSHPSS 326


>gi|340371596|ref|XP_003384331.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 178/311 (57%), Gaps = 25/311 (8%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
             + L+K K+ K Y S  E + R  I+  N      H  +D S    + +F+DLT  EF 
Sbjct: 27  EEWRLWKGKYGKTYRSIYEDNMRQKIWLQNRDYVNEHNSMDSSFQLEVNEFADLTAEEFS 86

Query: 118 RTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
             Y G   K R  ++ +   I       +P   DWR KG V PVK+Q  CGSCW+FSTTG
Sbjct: 87  SIYNGYG-KGRNRENHENTTIYRYTGGAIPDSVDWRTKGLVTPVKNQKQCGSCWAFSTTG 145

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           +LEGA+   TGKLVSLSEQ LVDCD +         D GC GGLM +AF+Y  +  G+  
Sbjct: 146 SLEGAHAKKTGKLVSLSEQNLVDCDKK---------DHGCQGGLMTTAFKYIEENKGIDT 196

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVA-NFSVVSLDEDQIAANLVKNGPLAVAINAVY-- 292
           EE YPY    +   C+F K  I A+V  + S+++ D + +   + + GP++VA++A +  
Sbjct: 197 EESYPYKA--KNGRCEFKKDDIGATVERHVSILTTDCEALKKAVAEIGPISVAMDASHSS 254

Query: 293 MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Q Y  G+  P IC SR+LDHGVL+VGYG       +   + YW++KNSWG++WG  GY+
Sbjct: 255 FQLYKSGIYDPKICSSRKLDHGVLVVGYG-------KEDGEEYWLVKNSWGKNWGMEGYF 307

Query: 352 KICRGRNVCGV 362
           KI   +N+CG+
Sbjct: 308 KIASKKNLCGI 318


>gi|20147096|gb|AAM09951.1| 49 kDa cysteine proteinase Cysp1 [Cryptobia salmositica]
          Length = 428

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 184/322 (57%), Gaps = 33/322 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK    + YAS +E   RF IF  N+++AA   + +P AT G  +F+D+T  EF+  
Sbjct: 10  FGNFKAAHARNYASPDEERKRFEIFAGNMKKAAVLNRKNPMATFGPNEFADMTSEEFQTR 69

Query: 120 Y----LGLRRKLRLPKDADQAPILPTNDLPA----DFDWREKGAVGPVKDQGSCGSCWSF 171
           +         K R PK+          ++ A      DWR KGAV PVK+QG+CGSCWSF
Sbjct: 70  HNAARHYAAAKARPPKNTK---TFTAEEIKAAVGQQIDWRLKGAVTPVKNQGACGSCWSF 126

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA- 230
           STTG +EG + +ATG+LV++SEQ+LV CD           D GCNGGLM++AF + + A 
Sbjct: 127 STTGNIEGQHAIATGQLVAVSEQELVSCD---------PIDDGCNGGLMDNAFGWLISAH 177

Query: 231 -GGLMREEDYPY-TGTDRGHACKF--DKSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
            G +  E +YPY +G     AC    +   + A+++ F  ++  E+ +AA + K+GPL++
Sbjct: 178 KGQIATEANYPYVSGNGIVPACSSSPESKPVGATISAFQDIARTEEDMAAFVFKHGPLSI 237

Query: 287 AINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
            ++A   Q+Y GG+   Y    ++DHGVL+VG+             PYWIIKNSW  +WG
Sbjct: 238 GVDASTWQSYAGGIMS-YCPQDQIDHGVLIVGFDDTA-------STPYWIIKNSWTANWG 289

Query: 347 ENGYYKICRGRNVCGVDSMVST 368
           E GY ++ +G N CG+ S  S+
Sbjct: 290 EEGYIRVAKGSNQCGLTSHPSS 311


>gi|8347420|dbj|BAA96501.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/374 (39%), Positives = 194/374 (51%), Gaps = 39/374 (10%)

Query: 9   FLVSLVV----FSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FS 61
            L++LVV    F++  +G      +  IRQV   G   L   E+    ++G   H   F+
Sbjct: 6   LLLALVVAGGLFASALAGPATFADENPIRQVVSDG---LHELENAILQVVGKTRHALSFA 62

Query: 62  LFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL 121
            F  ++ K Y S EE   RF +F  NL+    H K   S   G+ +F+DLT  EFRR  L
Sbjct: 63  RFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTDLTWDEFRRDRL 122

Query: 122 GLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
           G  +        +   +  TN  LP   DWRE G V PVK+QG CGSCW+FSTTGALE A
Sbjct: 123 GAAQNCSATTKGN---LKVTNVVLPETKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAA 179

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
              A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YP
Sbjct: 180 YSQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKSNGGLDTEEAYP 232

Query: 241 YTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTY 296
           YTG  +   CKF    +   V    N ++ + DE + A  LV+  P+++A   +   + Y
Sbjct: 233 YTG--KNGLCKFSSENVGVKVIDSVNITLGAEDELKYAVALVR--PVSIAFEVIKGFKQY 288

Query: 297 IGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
             GV     C      ++H VL VGYG            PYW+IKNSWG  WG+NGY+K+
Sbjct: 289 KSGVYTSTECGNTPMDVNHAVLAVGYGVENGV-------PYWLIKNSWGADWGDNGYFKM 341

Query: 354 CRGRNVCGVDSMVS 367
             G+N+CG+ +  S
Sbjct: 342 EMGKNMCGIATCAS 355


>gi|332376957|gb|AEE63618.1| unknown [Dendroctonus ponderosae]
          Length = 318

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/309 (41%), Positives = 174/309 (56%), Gaps = 30/309 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLTPAE 115
           F  FK K +K+Y++Q E   R  IF  NLR    H  L      S    + QF+DLT  E
Sbjct: 25  FQSFKLKHSKSYSNQVEEAKRLAIFTENLRDIEEHNALYAAGLVSYNKSVNQFTDLTIDE 84

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           F+  YL L  K  L    +  P + T   +P   DWR +G V  VKDQG CGSCW+FS  
Sbjct: 85  FK-AYLTLHSKPTL----NTVPYVRTGLQVPTTLDWRSQGYVTGVKDQGDCGSCWAFSVV 139

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G+ EGA + +TGKLVSLSEQQL+DC          + + GC+GG +   F Y ++  GL+
Sbjct: 140 GSTEGAYYKSTGKLVSLSEQQLIDC--------TTNVNDGCDGGYLEETFPY-VQQTGLV 190

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            E  YPYTG D    C+  +S +   V+ + ++  + D + A +   GP++VA++A Y+ 
Sbjct: 191 SESSYPYTGRDGN--CRISESDVVTKVSKYVLLGGEADLLEA-VGSVGPVSVAMDATYIY 247

Query: 295 TYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           +Y  GV    +CS   L+HGVL+VGYG+          K YW+IKNSWG +WGE GY K+
Sbjct: 248 SYASGVYESSLCSLYSLNHGVLVVGYGTQ-------DGKDYWLIKNSWGNTWGEQGYLKL 300

Query: 354 CRGRNVCGV 362
            RG N CG+
Sbjct: 301 LRGTNECGI 309


>gi|426252096|ref|XP_004019754.1| PREDICTED: cathepsin F isoform 2 [Ovis aries]
          Length = 477

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 142/322 (44%), Positives = 181/322 (56%), Gaps = 39/322 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y SQEE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 180 FKDFVTTYNRTYDSQEEASWRMSVFANNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 239

Query: 119 TYLG--LR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            YL   L+    R +RL +     P       P  +DWR KGAV  VKDQG CGSCW+FS
Sbjct: 240 IYLNPLLKDAPGRNMRLAQPVTDVP-------PPQWDWRNKGAVTDVKDQGMCGSCWAFS 292

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GG
Sbjct: 293 VTGNVEGQWFLKRGTLLSLSEQELLDCDK---------TDKACLGGLPSNAYSAIRTLGG 343

Query: 233 LMREEDYPYTGTDRGH--ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           L  E+DY Y    RGH   C F   K    + +   +S +E ++AA L K GP++VAINA
Sbjct: 344 LETEDDYSY----RGHLQTCSFSAEKAKVYINDSVELSKNEQKLAAWLAKKGPISVAINA 399

Query: 291 VYMQTYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
             MQ Y  G+S P   +CS  L DH VLLVGYG+           P+W IKNSWG +WGE
Sbjct: 400 FGMQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRS-------ATPFWAIKNSWGTNWGE 452

Query: 348 NGYYKICRGRNVCGVDSMVSTV 369
            GYY + RG   CGV+ M S+ 
Sbjct: 453 EGYYYLHRGSGACGVNIMASSA 474


>gi|449500145|ref|XP_004161017.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 349

 Score =  221 bits (564), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/314 (39%), Positives = 173/314 (55%), Gaps = 23/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  K +K Y S EE  HRF IF  NL+      K   S   G+ +F+DL+  EF+  
Sbjct: 47  FESWMSKHSKTYRSIEEKLHRFEIFLDNLKHIDETNKKVSSYWLGLNEFADLSHEEFKSK 106

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           YLGLR +    + +         DLP   DWR KGAV PVK+QGSCGSCW+FST  A+EG
Sbjct: 107 YLGLRVEFPRKRSSRGFSYGDVEDLPESVDWRTKGAVTPVKNQGSCGSCWAFSTVAAVEG 166

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
            N + TG L SLSEQ+L+DCD         S ++GC GGLM+ AF+Y +   GL +EEDY
Sbjct: 167 INQIVTGNLTSLSEQELIDCDR--------SFNNGCYGGLMDYAFQYIMSNSGLRKEEDY 218

Query: 240 PYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYI 297
           PY   + G   +  +     +++ +  V  +++Q     + + P++VAI A     Q Y 
Sbjct: 219 PYL-MEEGRCIREKEQFEVVTISGYEDVPANDEQSLLKALSHQPVSVAIEASSRNFQFYK 277

Query: 298 GGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG- 356
           GG+     C  ++DHGV  VGYGS+       +   Y I+KNSWG  WGENGY ++ R  
Sbjct: 278 GGIFTGR-CGTQMDHGVTAVGYGSS-------EGTDYIIVKNSWGPKWGENGYIRMKRNT 329

Query: 357 ---RNVCGVDSMVS 367
                +CG++ M S
Sbjct: 330 GKPEGLCGINQMAS 343


>gi|116787404|gb|ABK24495.1| unknown [Picea sitchensis]
 gi|224286306|gb|ACN40861.1| unknown [Picea sitchensis]
          Length = 452

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 131/313 (41%), Positives = 175/313 (55%), Gaps = 27/313 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           + L+  +  +AY   +E   RF++FK N      H + + S   G+ QF+DL+  EF+ T
Sbjct: 42  YELWLAEHKRAYNGLDEKQKRFSVFKDNFLYIHEHNQGNRSYKLGLNQFADLSHEEFKAT 101

Query: 120 YLG--LRRKLRLPKD-ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           YLG  L  K RL +  + +       DLP   DWREKGAV  VKDQGSCGSCW+FST  A
Sbjct: 102 YLGAKLDTKKRLSRPPSRRYQYSDGEDLPESIDWREKGAVTSVKDQGSCGSCWAFSTVAA 161

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG N + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GGL  E
Sbjct: 162 VEGINQIVTGDLISLSEQELVDCDT--------SYNQGCNGGLMDYAFEFIINNGGLDSE 213

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQ 294
           EDYPYT  D G    + K+    ++ ++  V  ++++       N P++VAI A     Q
Sbjct: 214 EDYPYTAYD-GSCDSYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGREFQ 272

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y  GV     C  +LDHGV LVGYGS            YW +KNSWG+SWGE G+ ++ 
Sbjct: 273 FYDSGVFTS-TCGTQLDHGVTLVGYGSE-------SGTDYWTVKNSWGKSWGEEGFIRLQ 324

Query: 355 RGRNV-----CGV 362
           R   V     CG+
Sbjct: 325 RNIEVASTGMCGI 337


>gi|3916212|gb|AAC78838.1| cathepsin F [Homo sapiens]
          Length = 338

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 179/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 41  FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 100

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA      DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 101 IYLNTLLRKEPGNKMKQAK--SVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 158

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 159 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 209

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 210 DYSYQG--HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYR 267

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 268 HGISRPLRPLCSPWLIDHAVLLVGYGNRS-------DVPFWAIKNSWGTDWGEKGYYYLH 320

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 321 RGSGACGVNTMASS 334


>gi|94448674|emb|CAI91575.1| cathepsin L2 [Lubomirskia baicalensis]
          Length = 324

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 173/312 (55%), Gaps = 23/312 (7%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP--SATHGITQFSDLTPAEFRRTY 120
           +K +  K+Y + +E   R   ++AN +    H +       T  + QF DL  +EF+  Y
Sbjct: 25  WKAEHGKSYRNHKEEMLRHVTWQANKKYIDEHNQHAGVFGYTLKMNQFGDLENSEFKSLY 84

Query: 121 LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
            G R      K     P     DLPA  DW +KG V PVK+QG CGSCWSFS TG++EG 
Sbjct: 85  NGYRMSNAPRKGKPFVPAARVQDLPASVDWSKKGWVTPVKNQGQCGSCWSFSATGSMEGQ 144

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           +F ATG L+SLSEQ LVDC            + GCNGGLM+ AFEY +K  G+  E  YP
Sbjct: 145 HFNATGTLMSLSEQNLVDC-------SAAEGNHGCNGGLMDDAFEYVIKNNGIDTEASYP 197

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLD-EDQIAANLVKNGPLAVAINAVYM--QTYI 297
           Y   D    CKF+ + + A+++ +  V+ D E  +   +   GP++VAI+A ++  Q Y 
Sbjct: 198 YRAVDS--TCKFNTADVGATISGYVDVTKDSESDLQVAVATIGPVSVAIDASHISFQFYS 255

Query: 298 GGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
            GV  P ICS   LDHGVL VGYG+ G        K YW++KNSWG SWG +GY ++ R 
Sbjct: 256 SGVYDPLICSSTNLDHGVLAVGYGTDG-------SKDYWLVKNSWGASWGMSGYIEMVRN 308

Query: 357 R-NVCGVDSMVS 367
             N CG+ +  S
Sbjct: 309 HNNKCGIATSAS 320


>gi|18422289|ref|NP_568620.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
 gi|9757832|dbj|BAB08269.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|17065064|gb|AAL32686.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|21387153|gb|AAM47980.1| cysteine protease component of protease-inhibitor complex
           [Arabidopsis thaliana]
 gi|332007522|gb|AED94905.1| Granulin repeat cysteine protease family protein [Arabidopsis
           thaliana]
          Length = 463

 Score =  221 bits (562), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/294 (43%), Positives = 170/294 (57%), Gaps = 20/294 (6%)

Query: 64  KKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL 123
           KKK N+     E+ D RF IFK NLR    H   + S   G+T+F+DLT  E+R  YLG 
Sbjct: 59  KKKMNQNGLGAEK-DQRFEIFKDNLRFIDEHNTKNLSYKLGLTRFADLTNEEYRSMYLGA 117

Query: 124 RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
           +   R+ K +D+      + LP   DWR++GAV  VKDQGSCGSCW+FST GA+EG N +
Sbjct: 118 KPTKRVLKTSDRYQARVGDALPDSVDWRKEGAVADVKDQGSCGSCWAFSTIGAVEGINKI 177

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
            TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  E DYPY  
Sbjct: 178 VTGDLISLSEQELVDCDT--------SYNQGCNGGLMDYAFEFIIKNGGIDTEADYPYKA 229

Query: 244 TDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVS 301
            D G   +  K+    ++ ++  V  + +      + + P++VAI A     Q Y  GV 
Sbjct: 230 AD-GRCDQNRKNAKVVTIDSYEDVPENSEASLKKALAHQPISVAIEAGGRAFQLYSSGVF 288

Query: 302 CPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
              +C   LDHGV+ VGYG+          K YWI++NSWG  WGE+GY K+ R
Sbjct: 289 -DGLCGTELDHGVVAVGYGTE-------NGKDYWIVRNSWGNRWGESGYIKMAR 334


>gi|358255476|dbj|GAA57175.1| cathepsin L [Clonorchis sinensis]
          Length = 385

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 142/348 (40%), Positives = 184/348 (52%), Gaps = 50/348 (14%)

Query: 52  DLLGAEHHFSL------FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSA 101
           D++G + +F+L      F   + + Y    EH+ RF IF  N  R ++H     +   S 
Sbjct: 52  DVIGVDWNFTLSSIWKHFMTTYKRNYIDPSEHERRFKIFANNFVRISKHNVRFIQGQVSY 111

Query: 102 THGITQFSD------------LTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFD 149
           T GI +FSD             T  E +R     R  L   +D  +  I      P++ D
Sbjct: 112 TMGINEFSDKVIGLIIHTICFQTDEELKRLRC-FRGSLNASRDGSKY-ITIAAPPPSEID 169

Query: 150 WREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPG 209
           WR KGAV PVK+QG+CGSCW+FS TGA+EG NFLATG LVSLSEQQLVDC  E       
Sbjct: 170 WRNKGAVTPVKNQGNCGSCWAFSATGAIEGQNFLATGNLVSLSEQQLVDCSSEYG----- 224

Query: 210 SCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHA---CKFDKSKIAASVANFSV 266
             ++ CNGGLM++AF+Y   + G+  E  YPY   + G A   C+F+  +    V  +  
Sbjct: 225 --NNACNGGLMDNAFKYVKDSNGIDTEASYPYVSGETGDANPTCRFNLKEAVVRVTGY-- 280

Query: 267 VSLDEDQIA---ANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSR-RLDHGVLLVGYG 320
           + L   Q++     +   GP++VAINA      +Y  GV     CS   LDHGVLLVGYG
Sbjct: 281 IDLPRGQVSELKQAVGHYGPISVAINAGLPSFMSYKSGVYSDDQCSSDDLDHGVLLVGYG 340

Query: 321 SAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
                       PYW+IKNSWG  WGENGY KI R   N+CGV SM S
Sbjct: 341 EE-------NGIPYWLIKNSWGPHWGENGYVKILRDHNNLCGVASMAS 381


>gi|332375406|gb|AEE62844.1| unknown [Dendroctonus ponderosae]
          Length = 320

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 174/310 (56%), Gaps = 28/310 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH-----QKLDPSATHGITQFSDLTPA 114
           F  FK K NK Y +  E   R+ IF+A L     H     Q L+ +   G+ +FSD T  
Sbjct: 23  FQAFKLKQNKTYKTPVEETTRYGIFQAKLLEIEEHNSRFEQGLE-TYKKGVNKFSDWTQD 81

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EF   YLGL  K    K     P + T   +PA  DWR +G V  VK+QG CGSCW+FS 
Sbjct: 82  EFN-AYLGLHPKP--AKLGKGIPYVKTGVSVPASVDWRTEGYVTGVKNQGDCGSCWAFSL 138

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TG++EGA F +TGKLVSLSEQQLVDC +       G+ + GC+GG +   F Y ++  GL
Sbjct: 139 TGSVEGALFKSTGKLVSLSEQQLVDCTY-------GTVNFGCDGGYLEETFPY-IQETGL 190

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             E  YPY   D    CKFD SK+   + ++     DE+ +       GP++VA++A Y+
Sbjct: 191 EAEASYPYKARD--GTCKFDASKVVTKINDYVYWYGDEEALLEATATIGPISVAMDANYI 248

Query: 294 QTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            +Y  GV    +CS   L+HGVL+VGYGS            YW++KNSW E WGE+GY K
Sbjct: 249 DSYASGVFSSRLCSSDDLNHGVLVVGYGSENGV-------NYWLVKNSWAEDWGESGYLK 301

Query: 353 ICRGRNVCGV 362
           + RG+N CG+
Sbjct: 302 LLRGQNECGI 311


>gi|355751926|gb|EHH56046.1| Cathepsin F, partial [Macaca fascicularis]
          Length = 381

 Score =  221 bits (562), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 141/316 (44%), Positives = 182/316 (57%), Gaps = 29/316 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 84  FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 143

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 144 IYLNPLLREEPGNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 201

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 202 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 252

Query: 238 DYPYTGTDRGH--ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           DY Y    RGH  AC F   K    + +   +S +E ++AA L K GP++VAINA  MQ 
Sbjct: 253 DYSY----RGHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQF 308

Query: 296 YIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Y  G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY 
Sbjct: 309 YRHGISRPLRPLCSPWLIDHAVLLVGYGNRS-------DIPFWAIKNSWGTDWGEKGYYY 361

Query: 353 ICRGRNVCGVDSMVST 368
           + RG   CGV++M S+
Sbjct: 362 LHRGSGACGVNTMASS 377


>gi|146335576|gb|ABQ23397.1| cathepsin L [Trypanosoma carassii]
          Length = 456

 Score =  221 bits (562), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 179/315 (56%), Gaps = 24/315 (7%)

Query: 55  GAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPA 114
           G    F+ FK +  K+Y S  E  +R  +F+ +++ A  H   +P A  G+T+FSDLT  
Sbjct: 31  GLAAQFAAFKAEHGKSYTSAAEEGYRMRVFEESMKAAQAHAAANPHAKFGVTKFSDLTHE 90

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EF+  Y              + P+  T   P ++DWR+KGAV PVKDQG CGSCW+FSTT
Sbjct: 91  EFKTLYANGAAHFAAAAKRARRPVSVTGTAPDEWDWRKKGAVTPVKDQGHCGSCWTFSTT 150

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GG 232
           G +EG   +A  +L +LSEQ LV CD           D GC+GGLM++AFE+ +    G 
Sbjct: 151 GNIEGQWAVAGNELTNLSEQMLVSCDAR---------DYGCSGGLMDNAFEWIVNQNDGF 201

Query: 233 LMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  EE YPY +G+     C     K+ A++     +  DE+++AA L  NGP+++A++A 
Sbjct: 202 VFTEESYPYASGSGDAPLCDVGGRKVGATIKGHVGLPNDEEKMAAWLAANGPISIAVDAD 261

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
             + Y GGV   C      +LDHGVLLVGY        ++   PYWIIKNSWG +WGE+G
Sbjct: 262 SFKAYKGGVLTGCE---EGQLDHGVLLVGYN-------KVANPPYWIIKNSWGPNWGEHG 311

Query: 350 YYKICRGRNVCGVDS 364
           Y ++  G N C ++S
Sbjct: 312 YIRVGFGTNQCNLNS 326


>gi|413919736|gb|AFW59668.1| cysteine protease 1 [Zea mays]
          Length = 469

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 177/321 (55%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  +   A   ++ +     + Y +  E + RF +F+ NLR    H     + 
Sbjct: 31  IVSYGERSEEE---ARRMYAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAG 87

Query: 102 TH----GITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLG+R R  R  +  D+       DLP   DWR KGAV
Sbjct: 88  VHSFRLGLNRFADLTNDEYRATYLGVRSRPQRERRLGDRYLAGDNEDLPESVDWRAKGAV 147

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             VKDQGSCGSCW+FST  A+EG N + TG ++SLSEQ+LVDCD         S + GCN
Sbjct: 148 AEVKDQGSCGSCWAFSTIAAVEGINQIVTGDMISLSEQELVDCDT--------SYNQGCN 199

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AFE+ +  GG+  EEDYPY GTD G      K+    ++ ++  V  + ++   
Sbjct: 200 GGLMDYAFEFIINNGGIDTEEDYPYKGTD-GRCDVNRKNAKVVTIDSYEDVPANSEKSLQ 258

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K Y
Sbjct: 259 KAVANQPISVAIEAGGRAFQLYNSGIFTG-TCGTALDHGVTAVGYGTE-------NGKDY 310

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI+KNSWG SWGE+GY ++ R
Sbjct: 311 WIVKNSWGSSWGESGYVRMER 331


>gi|356508490|ref|XP_003522989.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 349

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/315 (40%), Positives = 175/315 (55%), Gaps = 25/315 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  K  K Y S EE   RF IFK NL+      K+  +   G+ +F+DL+  EF+  
Sbjct: 47  FESWMSKHGKIYQSIEEKLLRFEIFKDNLKHIDERNKVVSNYWLGLNEFADLSHQEFKNK 106

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           YLGL+      +++ +       +LP   DWR+KGAV PVK+QGSCGSCW+FST  A+EG
Sbjct: 107 YLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEG 166

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
            N + TG L SLSEQ+L+DCD         + ++GCNGGLM+ AF + ++ GGL +EEDY
Sbjct: 167 INQIVTGNLTSLSEQELIDCDR--------TYNNGCNGGLMDYAFSFIVENGGLHKEEDY 218

Query: 240 PYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           PY   +    C+  K +    +++ +  V  + +Q     + N PL+VAI A     Q Y
Sbjct: 219 PYIMEE--GTCEMTKEETEVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFY 276

Query: 297 IGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
            GGV   + C   LDHGV  VGYG+A       K   Y I+KNSWG  WGE GY ++ R 
Sbjct: 277 SGGVFDGH-CGSDLDHGVAAVGYGTA-------KGVDYIIVKNSWGSKWGEKGYIRMRRN 328

Query: 357 ----RNVCGVDSMVS 367
                 +CG+  M S
Sbjct: 329 IGKPEGICGIYKMAS 343


>gi|344271925|ref|XP_003407787.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 333

 Score =  220 bits (561), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 169/311 (54%), Gaps = 21/311 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPA 114
            ++ ++  + K YA  EE D R  +++ N++   RH +      HG T     F D T  
Sbjct: 28  QWNQWRSTYKKVYAVNEE-DWRRAVWEKNMKMIERHNQEYSQGKHGFTMAMNAFGDKTNE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EFR+   G + +          P+     +P   DW +KG V PVKDQG CGSCW+FS T
Sbjct: 87  EFRQLMNGFQSQKHKKGKLFYEPVF--GHIPTSVDWTQKGYVTPVKDQGQCGSCWAFSAT 144

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF+Y    GGL 
Sbjct: 145 GALEGQMFRKTGKLVSLSEQNLVDCSWR-------EGNEGCNGGLMDNAFQYVKDNGGLD 197

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VY 292
            EE YPYT TD    C+++    AA+   F  +   E  +   +   GP++VAI+A  V 
Sbjct: 198 SEESYPYTATDT-QDCRYNPKYSAANDTGFVDIPPQEKALMKAVATVGPISVAIDAGQVS 256

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q Y  G+     C   ++HGVL VGYG  G  P + K   YW++KNSWG+SWG +GY K
Sbjct: 257 FQFYSSGIYFDPACRLTVNHGVLAVGYGFEGTDPDKNK---YWLVKNSWGKSWGADGYIK 313

Query: 353 ICRGRNV-CGV 362
           I + RN  CG+
Sbjct: 314 IAKDRNNHCGI 324


>gi|355566270|gb|EHH22649.1| Cathepsin F [Macaca mulatta]
          Length = 484

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 141/317 (44%), Positives = 182/317 (57%), Gaps = 29/317 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 187 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 246

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 247 IYLNPLLREEPGNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 304

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 305 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 355

Query: 238 DYPYTGTDRGH--ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           DY Y    RGH  AC F   K    + +   +S +E ++AA L K GP++VAINA  MQ 
Sbjct: 356 DYSY----RGHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQF 411

Query: 296 YIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Y  G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY 
Sbjct: 412 YRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDIPFWAIKNSWGTDWGEKGYYY 464

Query: 353 ICRGRNVCGVDSMVSTV 369
           + RG   CGV++M S+ 
Sbjct: 465 LHRGSGACGVNTMASSA 481


>gi|320169652|gb|EFW46551.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 325

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 133/316 (42%), Positives = 178/316 (56%), Gaps = 23/316 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F+ +K   N+ YAS +E   R  I+ +NL     H      S T G+ +F DL   EF  
Sbjct: 21  FAEWKALHNRQYASAQEEALRQEIYLSNLELINEHNAAGRHSYTLGMNEFGDLAHHEFAA 80

Query: 119 TYLGLR-RKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
            YLG+R   +   K    +  LP    LP   DWR  G V PVK+QG CGSCWSFSTTG+
Sbjct: 81  KYLGVRFNGVNATKSFASSTYLPRMVSLPDSVDWRTAGIVTPVKNQGQCGSCWSFSTTGS 140

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG +   TG LVSLSEQ LVDC  +   E       GCNGGLM+ AFEY +K GG+  E
Sbjct: 141 VEGQHARKTGTLVSLSEQNLVDCSSQEGNE-------GCNGGLMDDAFEYIIKNGGIDTE 193

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVYM-- 293
             YPYT T     CKF+ + I A+VA++  +++  E  +   +   GP++VAI+A ++  
Sbjct: 194 ASYPYTATTG--TCKFNAANIGATVASYQDIITGSESDLQNAVATVGPVSVAIDASHINF 251

Query: 294 QTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y  GV     CS  +LDHGVL VGYG++       + K YW++KNSWG +WG+ GY  
Sbjct: 252 QFYFTGVYNEKKCSTTQLDHGVLAVGYGTS------TEGKDYWLVKNSWGATWGKAGYIW 305

Query: 353 ICRGR-NVCGVDSMVS 367
           + R   N CG+ +  S
Sbjct: 306 MSRNADNQCGIATSAS 321


>gi|226496089|ref|NP_001149658.1| cysteine protease 1 precursor [Zea mays]
 gi|195629242|gb|ACG36262.1| cysteine protease 1 precursor [Zea mays]
          Length = 469

 Score =  220 bits (561), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 177/321 (55%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  +   A   ++ +     + Y +  E + RF +F+ NLR    H     + 
Sbjct: 31  IVSYGERSEEE---ARRMYAEWMAAHGRTYNAVGEEERRFEVFRDNLRYVDAHNAAADAG 87

Query: 102 TH----GITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLG+R R  R  +  D+       DLP   DWR KGAV
Sbjct: 88  VHSFRLGLNRFADLTNDEYRATYLGVRSRPQRERRLGDRYLAGDNEDLPESVDWRAKGAV 147

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             +KDQGSCGSCW+FST  A+EG N + TG ++SLSEQ+LVDCD         S + GCN
Sbjct: 148 AEIKDQGSCGSCWAFSTIAAVEGINQIVTGDMISLSEQELVDCDT--------SYNQGCN 199

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AFE+ +  GG+  EEDYPY GTD G      K+    ++ ++  V  + ++   
Sbjct: 200 GGLMDYAFEFIINNGGIDTEEDYPYKGTD-GRCDVNRKNAKVVTIDSYEDVPANSEKSLQ 258

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K Y
Sbjct: 259 KAVANQPISVAIEAGGRAFQLYNSGIFTG-TCGTALDHGVTAVGYGTE-------NGKDY 310

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI+KNSWG SWGE+GY ++ R
Sbjct: 311 WIVKNSWGSSWGESGYVRMER 331


>gi|344271892|ref|XP_003407771.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 126/319 (39%), Positives = 174/319 (54%), Gaps = 22/319 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLT 112
           +  +  +K  + K YA+ EE D R  +++ N++   RH +      HG T     F D+T
Sbjct: 26  DEQWYQWKSLYKKPYAANEE-DWRRAVWEKNMKMIERHNQEYSQGKHGFTMTMNAFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR+   G + + R+       P+     +P   DW +KG V PVKDQG CGSCW+FS
Sbjct: 85  NEEFRQVMNGFQNQKRIQGKLLYEPVF--GHIPKSVDWTQKGYVTPVKDQGQCGSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TGALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF+Y    GG
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCSRR-------EGNEGCNGGLMDNAFQYIKDNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  EE YPYT  D+   C+++    AA+   F  +   E  +   +   GP++VA++A +
Sbjct: 196 LDSEESYPYTAMDK-QDCRYNPKYSAANDTGFVDIPPQEKALMKAVATVGPISVAVDAGH 254

Query: 293 --MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y  G+     CS + L+HGVL+VGYG  G   I      YW++KNSWG  WG +G
Sbjct: 255 ESFQFYKSGIYYDSNCSSKDLNHGVLVVGYGFEG---IDSANNRYWLVKNSWGTGWGTDG 311

Query: 350 YYKICRGRNV-CGVDSMVS 367
           Y K+ + RN  CG+ +  S
Sbjct: 312 YIKMAKDRNNHCGIATAAS 330


>gi|3916214|gb|AAC78839.1| cathepsin F [Homo sapiens]
          Length = 302

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 179/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 5   FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 64

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA      DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 65  IYLNTLLRKEPGNKMKQAK--SVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 122

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 123 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 173

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 174 DYSYQG--HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYR 231

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 232 HGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLH 284

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 285 RGSGACGVNTMASS 298


>gi|355681647|gb|AER96812.1| cathepsin F [Mustela putorius furo]
          Length = 408

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 146/352 (41%), Positives = 194/352 (55%), Gaps = 42/352 (11%)

Query: 34  QVTDGGDEILS------HHESTNNDL-LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKA 86
           +VTD  +E LS      + E    D  +     F  F   +N+ Y S+EE   R ++F  
Sbjct: 79  KVTDDKNETLSSVLPLLNKEPLPQDFSVKMASIFKEFVTTYNRTYESKEETQWRMSVFSN 138

Query: 87  NLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLG--LR----RKLRLPKDADQAPIL 139
           N+ RA + Q LD  +A +G+T+FSDLT  EFR  YL   LR    + +RL K        
Sbjct: 139 NMMRAQKIQALDRGTAQYGVTKFSDLTEEEFRTIYLNPLLREYRGKNMRLDKSTG----- 193

Query: 140 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 199
             +  P+++DWR KGAV  VK+QG CGSCW+FS TG +EG  FL  G L+SLSEQ+L+DC
Sbjct: 194 --DSAPSEWDWRRKGAVTKVKNQGMCGSCWAFSVTGNVEGQWFLKQGALLSLSEQELLDC 251

Query: 200 DHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAA 259
           D           D  C GGL ++A+      GGL  E+DY Y G  R   C F   K   
Sbjct: 252 DK---------VDKACLGGLPSNAYSAIKTLGGLETEDDYSYRG--RMQTCGFSPKKARV 300

Query: 260 SVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRRL-DHGVLL 316
            + +   +S +E+ +AA L + GP++VAINA  MQ Y  G+S P   +CS  L DH VLL
Sbjct: 301 YINDSVELSQNEETLAAWLAEKGPISVAINAFGMQFYRHGISHPLRPLCSPWLIDHAVLL 360

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           VGYG+           P+W IKNSWG  WGE GYY + RG   CGV++M S+
Sbjct: 361 VGYGNR-------SGTPFWAIKNSWGSDWGEEGYYYLHRGSGACGVNTMASS 405


>gi|391332597|ref|XP_003740719.1| PREDICTED: cathepsin L-like [Metaseiulus occidentalis]
          Length = 330

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/327 (42%), Positives = 185/327 (56%), Gaps = 39/327 (11%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLT 112
           + H+ LFK++ NK Y  +++   R  IF+AN+++   H  L      S   G+  F+D+T
Sbjct: 23  DEHWELFKRQHNKTYLQKQDVGRR-AIFEANIKKINAHNLLYDLGRSSYRLGLNGFADMT 81

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTND-----LPADFDWREKGAVGPVKDQGSCGS 167
           P EF +      R  R   +  +   L   D     +P   DWR +G V PVK+QG CGS
Sbjct: 82  PDEFEKY-----RGTRFEANEARVSKLQHRDNRSMHVPDTVDWRTEGYVTPVKNQGVCGS 136

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CW+FSTTGALEG +F  +G LVSLSEQ LVDC            ++GCNGGLM++AF + 
Sbjct: 137 CWAFSTTGALEGQHFRRSGDLVSLSEQMLVDC-------SAVYGNAGCNGGLMDNAFRFI 189

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQI--AANLVKNGPL 284
             AGGL  E+ YPYTG D    C FD   I A +  F  V S DE+ +  AA +V  GP+
Sbjct: 190 KDAGGLETEKSYPYTGKD--GTCHFDARGIGAKLTGFVDVPSRDEEALKEAAGVV--GPV 245

Query: 285 AVAINAV--YMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           +VAI+A     Q Y  GV     CS   LDHGVL+VGYG+          K YW++KNSW
Sbjct: 246 SVAIDASGQNFQFYKDGVYDEITCSSTSLDHGVLVVGYGTT------RDGKDYWLVKNSW 299

Query: 342 GESWGENGYYKICRGR-NVCGVDSMVS 367
           G SWG++GY ++ R + N CG+ +M S
Sbjct: 300 GSSWGQSGYIQMSRNKENQCGIATMAS 326


>gi|2511689|emb|CAB17074.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 364

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 123/297 (41%), Positives = 166/297 (55%), Gaps = 24/297 (8%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           K  K Y   +E + RF +FK NL     H   + + T G+ +F+D+T  E+R  YLG R 
Sbjct: 42  KHRKVYNGLDEKEKRFQVFKDNLGFIQDHNAQNNTYTLGLNKFADITNEEYRAMYLGTRT 101

Query: 126 --KLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
             K R+ K  +       N    LP   DWR KGAVGP+KDQG+CGSCW+FST  A+EG 
Sbjct: 102 DAKRRVMKTQNTGHRYAYNSGDQLPVHVDWRLKGAVGPIKDQGNCGSCWAFSTVAAVEGI 161

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           N + TG+ VSLSEQ+LVDCD E         D GCNGGLM+ AF++ ++ GG+  EEDYP
Sbjct: 162 NNIVTGEFVSLSEQELVDCDRE--------YDEGCNGGLMDYAFQFIIQNGGIDTEEDYP 213

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIG 298
           Y G D G   +  K      +  +  V  + +      V + P++VAI A    +Q Y  
Sbjct: 214 YQGID-GTCDQTKKKTKVVQIDGYEDVPSNNENALKKAVSHQPVSVAIEASGRALQLYQS 272

Query: 299 GVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GV     C   LDHGV++VGYG+            YW+++NSWG  WGE+GY+K+ R
Sbjct: 273 GVFTGK-CGTALDHGVVVVGYGTENGV-------DYWLVRNSWGTGWGEDGYFKMER 321


>gi|119594953|gb|EAW74547.1| cathepsin F, isoform CRA_a [Homo sapiens]
 gi|119594954|gb|EAW74548.1| cathepsin F, isoform CRA_a [Homo sapiens]
          Length = 392

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 179/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 95  FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 154

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA      DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 155 IYLNTLLRKEPGNKMKQAK--SVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 212

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 213 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 263

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 264 DYSYQG--HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYR 321

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 322 HGISRPLRPLCSPWLIDHAVLLVGYGNRS-------DVPFWAIKNSWGTDWGEKGYYYLH 374

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 375 RGSGACGVNTMASS 388


>gi|395742406|ref|XP_003777749.1| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Pongo abelii]
          Length = 490

 Score =  220 bits (560), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 139/314 (44%), Positives = 180/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R +IF  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 193 FKNFVITYNRTYESKEEARWRLSIFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 252

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 253 IYLNPLLREEPSNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 310

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 311 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 361

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 362 DYSYQG--HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYR 419

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 420 HGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLH 472

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 473 RGSGACGVNTMASS 486


>gi|1256830|gb|AAB68374.1| cysteine endopeptidase 1 [Phaseolus vulgaris]
 gi|2959418|emb|CAA12118.1| cysteine protease [Phaseolus vulgaris]
          Length = 364

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 123/297 (41%), Positives = 166/297 (55%), Gaps = 24/297 (8%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           K  K Y   +E + RF +FK NL     H   + + T G+ +F+D+T  E+R  YLG R 
Sbjct: 42  KHRKVYNGLDEKEKRFQVFKDNLGFIQDHNAQNNTYTLGLNKFADITNKEYRAMYLGTRT 101

Query: 126 --KLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
             K R+ K  +       N    LP   DWR KGAVGP+KDQG+CGSCW+FST  A+EG 
Sbjct: 102 DAKRRVMKTQNTGHRYAYNSGDQLPVHVDWRLKGAVGPIKDQGNCGSCWAFSTVAAVEGI 161

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           N + TG+ VSLSEQ+LVDCD E         D GCNGGLM+ AF++ ++ GG+  EEDYP
Sbjct: 162 NNIVTGEFVSLSEQELVDCDRE--------YDEGCNGGLMDYAFQFIIQNGGIDTEEDYP 213

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIG 298
           Y G D G   +  K      +  +  V  + +      V + P++VAI A    +Q Y  
Sbjct: 214 YQGID-GTCDETKKKTKVVQIDGYEDVPSNNENALKKAVSHQPVSVAIEASGRALQLYQS 272

Query: 299 GVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GV     C   LDHGV++VGYG+            YW+++NSWG  WGE+GY+K+ R
Sbjct: 273 GVFTGK-CGTALDHGVVVVGYGTENGV-------DYWLVRNSWGTGWGEDGYFKMER 321


>gi|113819972|gb|AAH04054.2| Ctsf protein [Mus musculus]
          Length = 332

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 180/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R T+F  N+ RA + Q LD  +A +GIT+FSDLT  EF  
Sbjct: 35  FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHT 94

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL     L+       +P    NDL P ++DWR+KGAV  VK+QG CGSCW+FS TG +
Sbjct: 95  IYLN--PLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNV 152

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 153 EGQWFLNRGTLLSLSEQELLDCD---------KVDKACLGGLPSNAYAAIKNLGGLETED 203

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G      C F        + +   +S +E++IAA L + GP++VAINA  MQ Y 
Sbjct: 204 DYGYQG--HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYR 261

Query: 298 GGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G++ P+  +CS   +DH VLLVGYG+           PYW IKNSWG  WGE GYY + 
Sbjct: 262 HGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDWGEEGYYYLY 314

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 315 RGSGACGVNTMASS 328


>gi|402892718|ref|XP_003909556.1| PREDICTED: cathepsin F [Papio anubis]
          Length = 460

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/316 (44%), Positives = 182/316 (57%), Gaps = 29/316 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 163 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 222

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 223 IYLNPLLREEPGNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 280

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 281 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 331

Query: 238 DYPYTGTDRGH--ACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           DY Y    RGH  AC F   K    + +   +S +E ++AA L K GP++VAINA  MQ 
Sbjct: 332 DYSY----RGHMQACNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQF 387

Query: 296 YIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Y  G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY 
Sbjct: 388 YRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDIPFWAIKNSWGTDWGEKGYYY 440

Query: 353 ICRGRNVCGVDSMVST 368
           + RG   CGV++M S+
Sbjct: 441 LHRGSGACGVNTMASS 456


>gi|242086591|ref|XP_002439128.1| hypothetical protein SORBIDRAFT_09g000960 [Sorghum bicolor]
 gi|241944413|gb|EES17558.1| hypothetical protein SORBIDRAFT_09g000960 [Sorghum bicolor]
          Length = 371

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 135/329 (41%), Positives = 185/329 (56%), Gaps = 31/329 (9%)

Query: 52  DLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQF 108
           DL+  +    LF++   K+ KAYAS EE  HRF +FK NL       K   +   G+  F
Sbjct: 55  DLVHHDRLIKLFEEWVAKYRKAYASFEEKLHRFEVFKDNLHHIDEANKKVTTYWLGLNAF 114

Query: 109 SDLTPAEFRRTYLGLRRKLRLPKDAD---QAPILPTNDLPADFDWREKGAVGPVKDQGSC 165
           +DLT  EF+ TYLGLR+     K  D   +   +  +D+PA  DWR+KGAV  VK+QG C
Sbjct: 115 ADLTHDEFKATYLGLRQP-ETKKTTDSRFRYGGVADDDVPASVDWRKKGAVTDVKNQGQC 173

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           GSCW+FST  A+EG N + TG L SLSEQ+LVDC  +         ++GCNGG+M++AF 
Sbjct: 174 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCSTD--------GNNGCNGGVMDNAFS 225

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLA 285
           Y   +GGL  EE YPY   +     K    +   +++ +  V  +++Q     + + PL+
Sbjct: 226 YIASSGGLRTEEAYPYLMEEGDCDDKARDGEQVVTISGYEDVPANDEQALVKALAHQPLS 285

Query: 286 VAINAV--YMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           VAI A   + Q Y GGV + P  C   LDHGV  VGYGS+       K + Y I+KNSWG
Sbjct: 286 VAIEASGRHFQFYSGGVFNGP--CGSELDHGVAAVGYGSS-------KGQDYIIVKNSWG 336

Query: 343 ESWGENGYYKICRG----RNVCGVDSMVS 367
             WGE GY ++ RG      +CG++ M S
Sbjct: 337 SHWGEKGYIRMKRGTGKPEGLCGINKMAS 365


>gi|358339356|dbj|GAA47436.1| cathepsin L [Clonorchis sinensis]
          Length = 236

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 110/228 (48%), Positives = 144/228 (63%), Gaps = 19/228 (8%)

Query: 140 PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 199
           PT  LP  FDWR+ G V  VKDQG CGSCW+F+ TG +EG  +  T KLVSLSEQQL+DC
Sbjct: 17  PTQSLPGSFDWRQHGVVTEVKDQGMCGSCWAFAVTGNIEGQWYKKTKKLVSLSEQQLLDC 76

Query: 200 DHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAA 259
           D +         D  CNGG    A+E  +K GGLM E+DYPY        C    + I+A
Sbjct: 77  DKK---------DEACNGGFPEWAYESIVKMGGLMSEKDYPYEA--HKETCNLKPNNISA 125

Query: 260 SVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP--YICSRR-LDHGVLL 316
            + +   +S DE ++AA L +NGP++V +NA ++Q Y GGVS P   +CS + LDH VLL
Sbjct: 126 YINDSVTLSKDEKELAAWLTENGPISVGMNANFLQFYFGGVSHPPHMLCSEQGLDHAVLL 185

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDS 364
           VGYG   +      ++PYWI+KNSWG SWGE GY++I RG   CG+++
Sbjct: 186 VGYGVTSFW-----QRPYWIVKNSWGRSWGEKGYFRIYRGDGTCGINA 228


>gi|440793751|gb|ELR14926.1| Cysteine proteinase 5, putative [Acanthamoeba castellanii str.
           Neff]
          Length = 326

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 178/312 (57%), Gaps = 23/312 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F+ + ++  K+YA+ EE  +R+ +++ N      H   + S    + +F DLT AEF + 
Sbjct: 30  FADWMQEHQKSYAN-EEFVYRWNVWRENYLYIEAHNHQNKSFHLAMNKFGDLTNAEFNKL 88

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           + GL   +   +   ++ I P   LPADFDWR+KGAV  VK+QG CGSCWSFSTTG+ EG
Sbjct: 89  FKGL--SITADQAKQESDIAPAPGLPADFDWRQKGAVTHVKNQGQCGSCWSFSTTGSTEG 146

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
           ANFL  G+L SLSEQ LVDC            + GCNGGLM+ AFEY ++  G+  EE Y
Sbjct: 147 ANFLKHGRLTSLSEQNLVDC-------STSYGNHGCNGGLMDYAFEYIIRNKGIDTEESY 199

Query: 240 PYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYI 297
           PY  +     C+++K      + +++ V    +    N V   P +VAI+A +   Q Y 
Sbjct: 200 PYHASQG--TCRYNKQHSGGELVSYTNVPSGNEGALLNAVATQPTSVAIDASHSSFQFYK 257

Query: 298 GGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
           GGV   P   S RLDHGVL VG+G      +R   K YW++KNSWG  WG +GY ++ R 
Sbjct: 258 GGVYDEPACSSSRLDHGVLAVGWG------VR-DGKDYWLVKNSWGADWGLSGYIEMSRN 310

Query: 357 R-NVCGVDSMVS 367
           + N CG+ +  S
Sbjct: 311 KHNQCGIATAAS 322


>gi|9845246|ref|NP_063914.1| cathepsin F precursor [Mus musculus]
 gi|12643321|sp|Q9R013.1|CATF_MOUSE RecName: Full=Cathepsin F; Flags: Precursor
 gi|6467384|gb|AAF13147.1|AF136280_1 cathepsin F precursor [Mus musculus]
 gi|7141165|gb|AAF37228.1|AF217224_1 cathepsin F [Mus musculus]
 gi|26344728|dbj|BAC36013.1| unnamed protein product [Mus musculus]
 gi|37589148|gb|AAH58758.1| Cathepsin F [Mus musculus]
 gi|148701127|gb|EDL33074.1| cathepsin F, isoform CRA_b [Mus musculus]
          Length = 462

 Score =  220 bits (560), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 180/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R T+F  N+ RA + Q LD  +A +GIT+FSDLT  EF  
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHT 224

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL     L+       +P    NDL P ++DWR+KGAV  VK+QG CGSCW+FS TG +
Sbjct: 225 IYLN--PLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNV 282

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 283 EGQWFLNRGTLLSLSEQELLDCDK---------VDKACLGGLPSNAYAAIKNLGGLETED 333

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G      C F        + +   +S +E++IAA L + GP++VAINA  MQ Y 
Sbjct: 334 DYGYQG--HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYR 391

Query: 298 GGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G++ P+  +CS   +DH VLLVGYG+           PYW IKNSWG  WGE GYY + 
Sbjct: 392 HGIAHPFRPLCSPWFIDHAVLLVGYGNRS-------NIPYWAIKNSWGSDWGEEGYYYLY 444

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 445 RGSGACGVNTMASS 458


>gi|261289779|ref|XP_002611751.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
 gi|229297123|gb|EEN67761.1| hypothetical protein BRAFLDRAFT_284345 [Branchiostoma floridae]
          Length = 330

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 179/321 (55%), Gaps = 29/321 (9%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFS 109
           L  E  +  FK K +K Y+ +EE+  R  IF+ NL+    H +   +  H    G+ QF+
Sbjct: 18  LSFESQWEAFKIKHDKVYSEKEEYARRL-IFQDNLKTIESHNQEADTGKHSYWLGVNQFA 76

Query: 110 DLTPAEFRRTYLG-LRRKLRLPKDADQAPI--LPTNDLPADFDWREKGAVGPVKDQGSCG 166
           D+T AE+    +G       L K   +A    +P   +    DWR+KG V  +KDQG CG
Sbjct: 77  DMTHAEYLNQVIGGCLITSNLTKTGSRATYRYMPNMQVNDTVDWRDKGLVTDIKDQGQCG 136

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FSTTG+LEG +  ATG LVSLSEQ LVDC  +         + GC GG M+  F+Y
Sbjct: 137 SCWAFSTTGSLEGQHAKATGTLVSLSEQNLVDCSRQ-------EGNKGCEGGDMDQGFQY 189

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLA 285
            ++  G+  E+ YPY    + H CKFD S I A++++F+ V S DED +       GP++
Sbjct: 190 IIQNKGIDTEQCYPYKA--KNHRCKFDNSCIGATMSSFTDVTSGDEDALKQACANIGPIS 247

Query: 286 VAINAVY--MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           V I+A +   Q Y  GV   + CS  +LDHGVL+VGYG+ G        K YW++KNSWG
Sbjct: 248 VGIDASHQSFQFYSSGVYNEFECSSTKLDHGVLVVGYGTYG-------SKDYWLVKNSWG 300

Query: 343 ESWGENGYYKICRGR-NVCGV 362
             WG  GY  + R + N CGV
Sbjct: 301 TVWGNEGYIMMSRNKDNQCGV 321


>gi|4826565|emb|CAB42884.1| cathepsin F [Mus musculus]
          Length = 462

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 180/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R T+F  N+ RA + Q LD  +A +GIT+FSDLT  EF  
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHT 224

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL     L+       +P    NDL P ++DWR+KGAV  VK+QG CGSCW+FS TG +
Sbjct: 225 IYLN--PLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNV 282

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 283 EGQWFLNRGTLLSLSEQELLDCDK---------VDKACLGGLPSNAYAAIKNLGGLETED 333

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G      C F        + +   +S +E++IAA L + GP++VAINA  MQ Y 
Sbjct: 334 DYGYQG--HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYR 391

Query: 298 GGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G++ P+  +CS   +DH VLLVGYG+           PYW IKNSWG  WGE GYY + 
Sbjct: 392 HGIAHPFRPLCSPWFIDHAVLLVGYGNRS-------NIPYWAIKNSWGSDWGEEGYYYLY 444

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 445 RGSGACGVNTMASS 458


>gi|54696066|gb|AAV38405.1| cathepsin F [synthetic construct]
          Length = 485

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 180/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 187 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 246

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 247 IYLNTLLRKEPGNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 304

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 305 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 355

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 356 DYSYQG--HMQSCNFSAEKAKVYINDSMELSQNEQKLAAWLAKRGPISVAINAFGMQFYR 413

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 414 HGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLH 466

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 467 RGSGACGVNTMASS 480


>gi|371781445|emb|CCA95082.1| putative responsive to dehydration 19, partial [Ginkgo biloba]
          Length = 130

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 104/129 (80%), Positives = 116/129 (89%), Gaps = 3/129 (2%)

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLA 285
           Y LKAGGL +EEDYPYTGTD    CKFD  K+ A+V+NFSVVS+DEDQIAANLVKNGPL+
Sbjct: 4   YALKAGGLEKEEDYPYTGTD--GTCKFDDKKVVAAVSNFSVVSIDEDQIAANLVKNGPLS 61

Query: 286 VAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           V INAV+MQTYIGGVSCPYICS+R LDHGVLLVGYGSAGYAPIR+K+KPYWIIKNSWG +
Sbjct: 62  VGINAVFMQTYIGGVSCPYICSKRNLDHGVLLVGYGSAGYAPIRMKDKPYWIIKNSWGAN 121

Query: 345 WGENGYYKI 353
           WGE GYYK+
Sbjct: 122 WGEQGYYKL 130


>gi|326430491|gb|EGD76061.1| cathepsin [Salpingoeca sp. ATCC 50818]
          Length = 381

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/294 (46%), Positives = 169/294 (57%), Gaps = 32/294 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAE 115
           F  FK  F K Y S EE   RF IF  NL   ARH        H    G+ QF+DLT  E
Sbjct: 20  FDDFKTTFEKQYESPEEEARRFAIFADNLAFIARHNAEAARGLHTHTVGVNQFADLTNEE 79

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           +R+ YL       L ++  +  +   N      DWR+KGAV P+K+QG CGSCWSFSTTG
Sbjct: 80  YRQLYLRPYPTELLGRERQEVWLDGPN--AGSVDWRQKGAVTPIKNQGQCGSCWSFSTTG 137

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           ++EGA+ +ATG LVSLSEQQLVDC            + GCNGGLM++AF+Y +  GGL  
Sbjct: 138 SVEGAHAIATGNLVSLSEQQLVDCSGSFG-------NQGCNGGLMDNAFKYIISNGGLDT 190

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINA--VY 292
           E+DYPYT  D G   K  +SK A S++ +  V   +EDQ+AA  V+ GP++VAI A    
Sbjct: 191 EQDYPYTARD-GVCDKSKESKHAVSISGYKDVPQNNEDQLAA-AVEKGPVSVAIEADQQS 248

Query: 293 MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
            Q Y  GV S P  C   LDHGVL+VGY S            YWI+KNSWG SW
Sbjct: 249 FQMYSSGVFSGP--CGTNLDHGVLVVGYTS-----------DYWIVKNSWGASW 289


>gi|401416322|ref|XP_003872656.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488880|emb|CBZ24130.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 366

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G L
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCSGGLMLQAFDWLLQNTNGHL 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S    + A +    ++   E  +AA L KNGP+A+A++A
Sbjct: 209 YTEDSYPYV-SGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I  ++L+HGVLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct: 268 SSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVVMGVNAC 329


>gi|116786779|gb|ABK24233.1| unknown [Picea sitchensis]
          Length = 463

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/317 (41%), Positives = 178/317 (56%), Gaps = 25/317 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRR 118
           + L+  +  KAY    E  +RF++FK N     +H    +PS   G+ QF+DL+  EF+ 
Sbjct: 44  YELWLAQHKKAYNGLGEKQNRFSVFKDNFLYIHQHNNQGNPSYKLGLNQFADLSHEEFKA 103

Query: 119 TYLG--LRRKLRLPKD-ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           TYLG  L  K RL    + +       DLP   DWREKGAV  VKDQGSCGSCW+FST  
Sbjct: 104 TYLGAKLDTKKRLSNSPSPRYQYSDGEDLPESIDWREKGAVTAVKDQGSCGSCWAFSTVA 163

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           A+EG N + TG L SLSEQ+LVDCD         S + GCNGGLM+ AF++ +  GGL  
Sbjct: 164 AVEGINQIVTGNLTSLSEQELVDCDT--------SYNQGCNGGLMDYAFQFIINNGGLDS 215

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YM 293
           E+DYPY   D G    + K+    ++ ++  V  ++++       N P++VAI A     
Sbjct: 216 EDDYPYKAND-GSCDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGRAF 274

Query: 294 QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           Q Y  GV     C  +LDHGV LVGYGS            YWI+KNSWG+SWGE G+ ++
Sbjct: 275 QFYESGVFTS-TCGTQLDHGVTLVGYGSE-------SGTDYWIVKNSWGKSWGEKGFIRL 326

Query: 354 CRGRNVCGVDSMVSTVA 370
              RN+ GV + +  +A
Sbjct: 327 --QRNIEGVSTGMCGIA 341


>gi|6042196|ref|NP_003784.2| cathepsin F precursor [Homo sapiens]
 gi|12643325|sp|Q9UBX1.1|CATF_HUMAN RecName: Full=Cathepsin F; Short=CATSF; Flags: Precursor
 gi|4731642|gb|AAD26616.2|AF088886_1 cathepsin F precursor [Homo sapiens]
 gi|5305722|gb|AAD41790.1|AF132894_1 cathepsin F [Homo sapiens]
 gi|4826528|emb|CAB42883.1| cysteine proteinase [Homo sapiens]
 gi|15079738|gb|AAH11682.1| Cathepsin F [Homo sapiens]
 gi|22209085|gb|AAH36451.1| Cathepsin F [Homo sapiens]
 gi|61363874|gb|AAX42458.1| cathepsin F [synthetic construct]
 gi|123993139|gb|ABM84171.1| cathepsin F [synthetic construct]
 gi|189053904|dbj|BAG36411.1| unnamed protein product [Homo sapiens]
          Length = 484

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 180/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 187 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 246

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 247 IYLNTLLRKEPGNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 304

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 305 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 355

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 356 DYSYQG--HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYR 413

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 414 HGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLH 466

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 467 RGSGACGVNTMASS 480


>gi|11066228|gb|AAG28508.1|AF197480_1 cathepsin F [Mus musculus]
          Length = 462

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 180/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R T+F  N+ RA + Q LD  +A +GIT+FSDLT  EF  
Sbjct: 165 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHT 224

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL     L+       +P    NDL P ++DWR+KGAV  VK+QG CGSCW+FS TG +
Sbjct: 225 IYLN--PLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNV 282

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 283 EGQWFLNRGTLLSLSEQELLDCDK---------VDKACLGGLPSNAYAAIKNLGGLETED 333

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G      C F        + +   +S +E++IAA L + GP++VAINA  MQ Y 
Sbjct: 334 DYGYQG--HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYR 391

Query: 298 GGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G++ P+  +CS   +DH VLLVGYG+           PYW IKNSWG  WGE GYY + 
Sbjct: 392 HGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDWGEEGYYYLY 444

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 445 RGSGACGVNTMASS 458


>gi|281203744|gb|EFA77940.1| hypothetical protein PPL_08585 [Polysphondylium pallidum PN500]
          Length = 505

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/343 (38%), Positives = 190/343 (55%), Gaps = 35/343 (10%)

Query: 51  NDLLGAE----HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT 106
           N LL +E    + F  +  +F K Y    E   RF+IFK+N+         +     G+ 
Sbjct: 168 NALLFSEEQYKNEFENWIDRFEKKY-DVSEFKKRFSIFKSNMDFVHSWNSKNSQTVLGLN 226

Query: 107 QFSDLTPAEFRRTYLGLRRK--LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGS 164
             +DLT  E+R+ YLG  +K  L  P + + + +       A  DWR+KGAV P+KDQG 
Sbjct: 227 HLADLTNLEYRQFYLGTHKKAVLGTPGNHEVSNLQSVFGDSATVDWRQKGAVSPIKDQGQ 286

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCWSFSTTG++EGA+ + +G +V LSEQ LVDC            + GCNGGLM+ AF
Sbjct: 287 CGSCWSFSTTGSVEGAHQIKSGNMVELSEQNLVDC-------STSEGNMGCNGGLMDYAF 339

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GP 283
           EY +   G+  E  YPYT +  G  CK++K+   A+++++  ++   +   A+ VKN GP
Sbjct: 340 EYIITNNGIDTESSYPYTASS-GTTCKYNKANSGATISSYKNITAGSESDLADAVKNAGP 398

Query: 284 LAVAINAVY--MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGY---------APIRLK- 330
           ++VAI+A +   Q Y  G+     CS   LDHGVL+VGYGS            + +R+K 
Sbjct: 399 VSVAIDASHNSFQLYSHGIYYDASCSSVNLDHGVLVVGYGSGTPDSDSRVHKGSQVRVKV 458

Query: 331 -----EKPYWIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
                 K YWI+KNSWG SWG+ G+  + + R N CG+ S  S
Sbjct: 459 PKTDDTKNYWIVKNSWGTSWGDKGFIYMSKDRDNNCGIASCAS 501


>gi|55740402|gb|AAV63977.1| cathepsin L precursor [Artemia franciscana]
          Length = 338

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 137/328 (41%), Positives = 179/328 (54%), Gaps = 30/328 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKLDPSATHGITQ 107
           +LL  E H  LFK    K Y SQ E   R  I+  N  + A+H    +K + S    + +
Sbjct: 25  NLLADEWH--LFKATHKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYQVAMNK 82

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL--PTN-DLPADFDWREKGAVGPVKDQGS 164
           F DL   EFR    G + K +    A+       P N ++P   DWREKGA+ PVKDQG 
Sbjct: 83  FGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGAITPVKDQGQ 142

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCW+FS+TGALEG  F  TGKL+SLSEQ L+DC  +   E       GCNGGLM+ AF
Sbjct: 143 CGSCWAFSSTGALEGQTFRKTGKLISLSEQNLIDCSGKYGNE-------GCNGGLMDQAF 195

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGP 283
           +Y     G+  E  YPY   D    C+++ +++ A       + S +ED++ A +   GP
Sbjct: 196 QYIKDNKGIDTENTYPYEAED--DVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGP 253

Query: 284 LAVAINAVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           ++VAI+A +   Q Y  GV     C S  LDHGVL+VGYGS          K YW++KNS
Sbjct: 254 VSVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSDN-------GKDYWLVKNS 306

Query: 341 WGESWGENGYYKICRGR-NVCGVDSMVS 367
           W E WG+ GY KI R R N CGV +  S
Sbjct: 307 WSEHWGDEGYIKIARNRKNHCGVATAAS 334


>gi|2677828|gb|AAB97142.1| cysteine protease [Prunus armeniaca]
          Length = 358

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/372 (38%), Positives = 189/372 (50%), Gaps = 32/372 (8%)

Query: 6   VVLFLVSLVVFSAVSSGTLIDDVDQL--IRQVTDGGDEILSHHESTNNDLLGAEH---HF 60
           V L L + +V  A+S G      D+   IR V+DG  E+    E     +LG      HF
Sbjct: 4   VTLVLSAALVLVAISCGAAASSFDESNPIRLVSDGLREL----EQQVVQVLGNSRRALHF 59

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTY 120
           + F  ++ K Y S EE   R+ IF  N +      K     T  + +F+D +  EFRR  
Sbjct: 60  ARFAHRYGKKYESVEEMKLRYEIFSENKKLIRSTNKKGLPYTLAVNRFADWSWEEFRRQR 119

Query: 121 LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
           LG  +             L    LP   +WRE+G V PVKDQG CGSCW+FSTTGALE A
Sbjct: 120 LGAAQNCSATTKGSHE--LTDAVLPESKNWREEGIVTPVKDQGHCGSCWTFSTTGALEAA 177

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
              A  K +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  E  YP
Sbjct: 178 YVQAFRKQISLSEQQLVDCAGAFN-------NFGCHGGLPSQAFEYIKYNGGLDTEAAYP 230

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY-MQTYIG 298
           Y GTD   ACKF    +   V +   ++L DE ++   +    P++VA   V   + Y  
Sbjct: 231 YVGTD--GACKFSAENVGVQVLDSVNITLGDEQELKHAVAFVRPVSVAFQVVKSFRIYKS 288

Query: 299 GVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GV     C      ++H VL VGYG  G         P+W+IKNSWGESWG+NGY+K+  
Sbjct: 289 GVYTSDTCGSSPMDVNHAVLAVGYGEEGGV-------PFWLIKNSWGESWGDNGYFKMEF 341

Query: 356 GRNVCGVDSMVS 367
           G+N+CGV +  S
Sbjct: 342 GKNMCGVATCAS 353


>gi|47224192|emb|CAG13112.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 327

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/316 (42%), Positives = 175/316 (55%), Gaps = 32/316 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E HF  +    NKAY+ QE H  R  IF  N RR  +H   + S T G+ QFSD+T AEF
Sbjct: 26  EQHFKSWMALHNKAYSVQEFH-QRLQIFTENKRRIEKHNGGNHSFTMGLNQFSDMTFAEF 84

Query: 117 RRTYLGLRRKLRLPKD--ADQAPILPTND-LPADFDWREKGA-VGPVKDQGSCGSCWSFS 172
           R+ +L        P++  A +   + TN   P   DWR KG  V PVK+QG+CGSCW+FS
Sbjct: 85  RKRFL-----WSEPQNCSATKGSYMKTNSPQPESIDWRTKGNYVTPVKNQGACGSCWTFS 139

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTG LE    + TGKLV LSEQQLVDC  + +       + GCNGGL + AFEY     G
Sbjct: 140 TTGCLESVTAINTGKLVPLSEQQLVDCAWDFN-------NHGCNGGLPSQAFEYIKYNKG 192

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAV 291
           LM E  YPYT  +    CK+     AA V N  ++ + DE  +   +  + P++ A    
Sbjct: 193 LMTESGYPYTAFEG--KCKYKPELAAAFVKNVVNITAYDEKGMEDAVATHNPVSFAFEVT 250

Query: 292 --YMQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
             +M  Y GGV     C +   +++H VL VGYG+           PYWI+KNSWG  WG
Sbjct: 251 DDFMH-YKGGVYSSSRCHKTTDKVNHAVLAVGYGNNN------SSVPYWIVKNSWGPYWG 303

Query: 347 ENGYYKICRGRNVCGV 362
           ENGY+ I RG+N+CG+
Sbjct: 304 ENGYFLIERGKNMCGL 319


>gi|449448298|ref|XP_004141903.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
 gi|449531757|ref|XP_004172852.1| PREDICTED: germination-specific cysteine protease 1-like [Cucumis
           sativus]
          Length = 365

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/364 (37%), Positives = 192/364 (52%), Gaps = 53/364 (14%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M + T  L L+S   F ++S+  L    D  +R++ D                       
Sbjct: 1   MATATTSLALLSFF-FLSISASALSRRSDGEVREIYD----------------------- 36

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTY 120
            L+  K  KAY   +E + RF IFK NL+    H   + +   G+  F+DLT  E+R  Y
Sbjct: 37  -LWLAKHGKAYNGIDEREKRFQIFKENLKFIDDHNSENRTYKVGLNMFADLTNEEYRALY 95

Query: 121 LGLR----RKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           LG R    R++   K A +   +   D LP   DWR +GAV PVK+QGSCGSCW+FST  
Sbjct: 96  LGTRSPPARRVMKAKTASRRYAVNNLDRLPESMDWRTRGAVAPVKNQGSCGSCWAFSTIA 155

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           A+EG N + TG+L+SLSEQ+LV CD +         +SGCNGGLM+ AF++ +  GGL  
Sbjct: 156 AVEGINQIVTGELISLSEQELVSCDKK--------YNSGCNGGLMDYAFQFIIDNGGLDT 207

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYM 293
           EEDYPY   D G      K+    S+  +  V  ++++     V + P++VAI A  + +
Sbjct: 208 EEDYPYEAFD-GQCDPTRKNAKVVSIDAYEDVPANDEESLKKAVAHQPVSVAIEASGLAL 266

Query: 294 QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEK--PYWIIKNSWGESWGENGYY 351
           Q Y  GV     C   LDHGV+ VGYG         KE    YW+++NSWG SWGE+GY+
Sbjct: 267 QLYQSGVFTGK-CGSALDHGVVAVGYG---------KENGVDYWLVRNSWGTSWGEDGYF 316

Query: 352 KICR 355
           K+ R
Sbjct: 317 KLER 320


>gi|449452572|ref|XP_004144033.1| PREDICTED: thiol protease aleurain-like [Cucumis sativus]
 gi|449500499|ref|XP_004161114.1| PREDICTED: thiol protease aleurain-like [Cucumis sativus]
          Length = 356

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/372 (40%), Positives = 192/372 (51%), Gaps = 37/372 (9%)

Query: 8   LFLVS--LVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSL 62
           LF VS  L+V S   +G++ DD +  IR V+D   E+    E     +LG   H   F+ 
Sbjct: 5   LFFVSSLLLVLSCAVAGSVFDDSNP-IRMVSDRLREL----ELEVVRVLGQVPHALRFAR 59

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLG 122
           F  ++ K Y + EE   RF IF  +L       K   S   G+ QF+D T  EFR+  LG
Sbjct: 60  FAHRYGKKYETAEEMKLRFGIFLESLELIKSTNKQGLSYKLGVNQFADWTWEEFRKHRLG 119

Query: 123 LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
             +             L    LP   DWR+ G V PVKDQG CGSCW+FSTTGALE A  
Sbjct: 120 AAQNCSATTKGSHK--LTDTALPESKDWRKDGIVSPVKDQGHCGSCWTFSTTGALEAAYA 177

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
            A GK +SLSEQQLVDC         G  + GCNGGL + AFEY    GGL  EE YPYT
Sbjct: 178 QAHGKGISLSEQQLVDCGR-------GFNNFGCNGGLPSQAFEYIKYNGGLDTEEAYPYT 230

Query: 243 GTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIG 298
           G D   +CKF    +   V    N ++ + DE + A   V+  P++VA   V   + Y  
Sbjct: 231 GVD--GSCKFVPENVGVQVIDSVNITLGAEDELKHAVAFVR--PVSVAFEVVSGFRLYSK 286

Query: 299 GVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GV     C      ++H VL VGYG            PYW+IKNSWG +WG+NGY+K+  
Sbjct: 287 GVYTSNSCGSTPMDVNHAVLAVGYGVE-------DGIPYWLIKNSWGGNWGDNGYFKMEM 339

Query: 356 GRNVCGVDSMVS 367
           G+N+CGV +  S
Sbjct: 340 GKNMCGVATCAS 351


>gi|148701126|gb|EDL33073.1| cathepsin F, isoform CRA_a [Mus musculus]
          Length = 417

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/315 (43%), Positives = 180/315 (57%), Gaps = 25/315 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R T+F  N+ RA + Q LD  +A +GIT+FSDLT  EF  
Sbjct: 120 FKDFMTTYNRTYESREEAQWRLTVFARNMIRAQKIQALDRGTAQYGITKFSDLTEEEFHT 179

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL     L+       +P    NDL P ++DWR+KGAV  VK+QG CGSCW+FS TG +
Sbjct: 180 IYL--NPLLQKESGRKMSPAKSINDLAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGNV 237

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 238 EGQWFLNRGTLLSLSEQELLDCDK---------VDKACLGGLPSNAYAAIKNLGGLETED 288

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G      C F        + +   +S +E++IAA L + GP++VAINA  MQ Y 
Sbjct: 289 DYGYQG--HVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYR 346

Query: 298 GGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G++ P+  +CS   +DH VLLVGYG+           PYW IKNSWG  WGE GYY + 
Sbjct: 347 HGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDWGEEGYYYLY 399

Query: 355 RGRNVCGVDSMVSTV 369
           RG   CGV++M S+ 
Sbjct: 400 RGSGACGVNTMASSA 414


>gi|116242316|gb|ABJ89815.1| putative cathepsin L preprotein [Clonorchis sinensis]
          Length = 371

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/317 (41%), Positives = 177/317 (55%), Gaps = 31/317 (9%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKLDPSATHGITQFSDLTPAEFRR 118
           F +K+ + Y S+ E + R  IF  N  R + H    +K + S + GI  FSD T +E   
Sbjct: 70  FLEKYKRVYDSKLEEERRLGIFTENFIRISEHNLLFEKGEVSYSMGINAFSDKTNSELD- 128

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLP-ADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
              G R   +  +   Q   +P +  P A+ DWR KGAV PVK+QG CGSCW+FS TG +
Sbjct: 129 VLRGFRHSSKASRSGSQ--YIPFDAAPPAEVDWRTKGAVTPVKNQGDCGSCWAFSATGGI 186

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG ++LATGKLVSLSEQQLVDC          S + GC+GGLM+ AFEY  +  G+  E 
Sbjct: 187 EGQHYLATGKLVSLSEQQLVDCS---------SSNDGCDGGLMDLAFEYVKEHKGIDTEV 237

Query: 238 DYPYTGTDRGHA--CKFDKSKIAASVANFSVVSLDEDQIAANLVK-NGPLAVAINAVY-- 292
            YPY   + G+A  C FD    A +V  +  +   ++ +    V  +GP++V INA    
Sbjct: 238 HYPYVSGNTGYARQCSFDPKYAAVNVTGYVDIPEGQELLLQQAVGFHGPISVGINAGLPS 297

Query: 293 MQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
              Y  G+   + C+   LDHGVL+VGYG            PYW+IKNSWGE WGENGY 
Sbjct: 298 FMAYESGIYSDHRCNPHDLDHGVLVVGYGVD-------NGVPYWLIKNSWGEDWGENGYV 350

Query: 352 KICRGR-NVCGVDSMVS 367
           +I R   N+CGV +M S
Sbjct: 351 RILRNHNNLCGVATMAS 367


>gi|146084829|ref|XP_001465113.1| cysteine peptidase A (CPA) [Leishmania infantum JPCM5]
 gi|134069209|emb|CAM67356.1| cysteine peptidase A (CPA) [Leishmania infantum JPCM5]
          Length = 354

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/374 (36%), Positives = 186/374 (49%), Gaps = 42/374 (11%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M  +    F + + +   V  G+       LI Q   G D+ +            A  H+
Sbjct: 1   MARRNPFFFAIVVTILFVVCYGS------ALIAQTPLGVDDFI------------ASAHY 42

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSDLTPAEFRRT 119
             FKK+  K +    E   RF  FK N++ A      +P A + ++ +F+DLTP EF + 
Sbjct: 43  GRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQEFAKL 102

Query: 120 YLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           YL      R  KD  +   +           DWREKG V PVK+QG CGSCW+F+TTG +
Sbjct: 103 YLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFATTGNI 162

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGLMR 235
           EG   L    LVSLSEQ LV CD         + D GCNGGLM  A ++ +    G +  
Sbjct: 163 EGQWALKNHSLVSLSEQVLVSCD---------NIDDGCNGGLMQQAMQWIINDHNGTVPT 213

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           E+ YPYT          D   + A +  +  +  DE++IAA + KNGP+AVA++A   Q 
Sbjct: 214 EDSYPYTSAGGTRPPCHDNGTVGAKIKGYMSLPHDEEEIAAYVGKNGPVAVAVDATTWQL 273

Query: 296 YIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y GGV    +C    L+HGVL+VG+        R  + PYWI+KNSWG SWGE GY ++ 
Sbjct: 274 YFGGVVT--LCFGLSLNHGVLVVGFN-------RQAKPPYWIVKNSWGSSWGEKGYIRLA 324

Query: 355 RGRNVCGVDSMVST 368
            G N C + + V T
Sbjct: 325 MGSNQCLLKNYVVT 338


>gi|410978262|ref|XP_003995514.1| PREDICTED: cathepsin L1-like [Felis catus]
          Length = 333

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/316 (41%), Positives = 170/316 (53%), Gaps = 23/316 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT----QFSDLTPAE 115
           +S +K    K Y   EE   R  ++K N++   +H        H  T     F D+T  E
Sbjct: 29  WSQWKATHGKLYGMDEE-GWRREVWKKNMKMIRQHNWEHSQGKHSFTVAMNGFGDMTNEE 87

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           F++   GL+ +        QAP+     +P+  DWREKG V PVKDQG CGSCW+FS TG
Sbjct: 88  FKQVMNGLQMQKHKKGKMFQAPLFAK--IPSSVDWREKGYVTPVKDQGPCGSCWAFSATG 145

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           ALEG  F  TGKLVSLSEQ LVDC            + GCNGGLMN+AF+Y    GGL  
Sbjct: 146 ALEGQMFRKTGKLVSLSEQNLVDCSQ-------AEGNEGCNGGLMNNAFQYVKDNGGLDS 198

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--M 293
           EE YPY   D   +CK+     AA+   F  +   E  +   +   GP++V I+A +   
Sbjct: 199 EESYPYHAQDE--SCKYKPQDSAANDTGFFDIPQQEKALMVAVATKGPISVGIDASHFTF 256

Query: 294 QTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y  G+   P   S  LDHGVL++GYG+     I    K YWI+KNSWG +WG +GY K
Sbjct: 257 QFYHEGIYYDPDCSSEDLDHGVLVIGYGTEIGQSIN---KTYWIVKNSWGANWGIDGYIK 313

Query: 353 ICRGR-NVCGVDSMVS 367
           + + R N CG+ +M S
Sbjct: 314 MAKDRKNHCGIATMAS 329


>gi|356533293|ref|XP_003535200.1| PREDICTED: LOW QUALITY PROTEIN: cysteine proteinase RD21a-like
           [Glycine max]
          Length = 466

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/308 (41%), Positives = 172/308 (55%), Gaps = 28/308 (9%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEF 116
           H +  +  K  KAY +  E + RF IFK NLR    H    D S   G+ +F+DLT  E+
Sbjct: 46  HVYEAWLVKHGKAYNALGEKERRFKIFKDNLRFIEEHNGAGDKSYKLGLNKFADLTNEEY 105

Query: 117 RRTYLGLR------RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           R  +LG R      +   + K  D+       +LPA  DWREKGAV P+KDQG CGSCW+
Sbjct: 106 RAMFLGTRTRGPKNKAAVVAKKTDRYAYRAGEELPAMVDWREKGAVTPIKDQGQCGSCWA 165

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST GA+EG N + TG L SLSEQ+LVDCD           + GCNGGLM+ AFE+ ++ 
Sbjct: 166 FSTVGAVEGINQIVTGNLTSLSEQELVDCDR--------GYNMGCNGGLMDYAFEFIVQN 217

Query: 231 GGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
           GG+  EEDYPY   D  + C  + K+    ++  +  V  ++++     V N P++VAI 
Sbjct: 218 GGIDTEEDYPYHAKD--NTCDPNRKNARVVTIDGYEDVPTNDEKSLMKAVANQPVSVAIE 275

Query: 290 AVYM--QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
           A  M  Q Y  GV     C   LDHGV+ VGYG+            YW+++NSWG +WGE
Sbjct: 276 AGGMEFQLYQSGVFTGR-CGTNLDHGVVAVGYGTE-------NGTDYWLVRNSWGSAWGE 327

Query: 348 NGYYKICR 355
           NGY K+ R
Sbjct: 328 NGYIKLER 335


>gi|398010921|ref|XP_003858657.1| cathepsin L-like protease, partial [Leishmania donovani]
 gi|322496866|emb|CBZ31937.1| cathepsin L-like protease, partial [Leishmania donovani]
          Length = 345

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 170/311 (54%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E     A   LVSLSEQQLV CD +         D+GCNGGLM  AFE+ L+   G +
Sbjct: 158 NIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYGIV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKI--AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPYT  +   A   + SK+   A +  + ++  +E  +AA L +NGP+A+A++A 
Sbjct: 209 FTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC       L+HGVLLVGY   G         PYW+IKNSWGE WGE G
Sbjct: 269 SFMSYQSGVLTSC---AGDALNHGVLLVGYNKTGGV-------PYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  GRN C
Sbjct: 319 YVRVAMGRNAC 329


>gi|9542|emb|CAA78443.1| cysteine proteinase [Leishmania mexicana]
          Length = 443

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 170/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD           D+GC+GGLM  AF++ L+   G L
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCD---------DMDNGCSGGLMLQAFDWLLQNTNGHL 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S    + A +    ++   E  +AA L KNGP+A+A++A
Sbjct: 209 HTEDSYPYV-SGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I  ++L+HGVLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct: 268 SSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVVMGVNAC 329


>gi|398014254|ref|XP_003860318.1| cysteine peptidase A (CBA) [Leishmania donovani]
 gi|13518086|gb|AAK27384.1| cysteine proteinase-like protein [Leishmania donovani]
 gi|322498538|emb|CBZ33611.1| cysteine peptidase A (CBA) [Leishmania donovani]
          Length = 354

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/366 (36%), Positives = 183/366 (50%), Gaps = 42/366 (11%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M  +    F + + +   V  G+       LI Q   G D+ +            A  H+
Sbjct: 1   MARRNPFFFAIVVTILFVVCYGS------ALIAQTPLGVDDFI------------ASAHY 42

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSDLTPAEFRRT 119
             FKK+  K +    E   RF  FK N++ A      +P A + ++ +F+DLTP EF + 
Sbjct: 43  GRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQEFAKL 102

Query: 120 YLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           YL      R  KD  +   +           DWREKG V PVK+QG CGSCW+F+TTG +
Sbjct: 103 YLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFATTGNI 162

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGLMR 235
           EG   L    LVSLSEQ LV CD         + D GCNGGLM  A ++ +    G +  
Sbjct: 163 EGQWALKNHSLVSLSEQVLVSCD---------NIDDGCNGGLMEQAMQWIINDHNGTVPT 213

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           E+ YPYT          D   + A +A +  +  DE++IAA + KNGP+AVA++A   Q 
Sbjct: 214 EDSYPYTSAGGTRPPCHDNGTVGAKIAGYMSLPHDEEEIAAYVGKNGPVAVAVDATTWQL 273

Query: 296 YIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y GGV    +C    L+HGVL+VG+        R  + PYWI+KNSWG SWGE GY ++ 
Sbjct: 274 YFGGVVT--LCFGLSLNHGVLVVGFN-------RQAKPPYWIVKNSWGSSWGEKGYIRLA 324

Query: 355 RGRNVC 360
            G N C
Sbjct: 325 MGSNQC 330


>gi|255555337|ref|XP_002518705.1| cysteine protease, putative [Ricinus communis]
 gi|223542086|gb|EEF43630.1| cysteine protease, putative [Ricinus communis]
          Length = 471

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/302 (41%), Positives = 175/302 (57%), Gaps = 24/302 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           + ++  +  KAY +  E + RF IFK NLR    H  +D S   G+ +F+DLT  E++  
Sbjct: 51  YEMWLVEHGKAYNALGEKEKRFEIFKDNLRFIDEHNSVDRSYKVGLNRFADLTNEEYKAM 110

Query: 120 YLG--LRRKLRLPKDADQAPILPT-NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           +LG  + RK R      Q  +    +DLP + DWREKGAV PVKDQG CGSCW+FST GA
Sbjct: 111 FLGTKMERKNRFLGTRSQRYLFKDGDDLPENVDWREKGAVVPVKDQGQCGSCWAFSTVGA 170

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG N + TG+L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  E
Sbjct: 171 VEGINQIVTGELISLSEQELVDCDK--------SYNQGCNGGLMDYAFEFIINNGGIDTE 222

Query: 237 EDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYM 293
           EDYPY  +D  + C  + K+    ++  +  V  +++      V + P++VAI A     
Sbjct: 223 EDYPYKASD--NICDPNRKNAKVVTIDGYEDVPENDENSLKKAVAHQPVSVAIEAGGRAF 280

Query: 294 QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           Q Y  GV     C   LDHGV+ VGYG+            YWI++NSWG +WGE+GY ++
Sbjct: 281 QLYKSGVFTGR-CGTELDHGVVAVGYGTENGV-------NYWIVRNSWGSAWGESGYIRM 332

Query: 354 CR 355
            R
Sbjct: 333 ER 334


>gi|401430387|ref|XP_003886572.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|356491640|emb|CBZ40951.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 332

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G L
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCSGGLMLQAFDWLLQNTNGHL 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S    + A +    ++   E  +AA L KNGP+A+A++A
Sbjct: 209 HTEDSYPYV-SGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I  ++L+HGVLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct: 268 SSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVVMGVNAC 329


>gi|186516984|ref|NP_195406.2| cysteine proteinase1 [Arabidopsis thaliana]
 gi|15290508|gb|AAK92229.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332661313|gb|AEE86713.1| cysteine proteinase1 [Arabidopsis thaliana]
          Length = 376

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/290 (42%), Positives = 168/290 (57%), Gaps = 27/290 (9%)

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLR----RKLRL 129
           + D RF IFK NLR    H + + +AT+  G+T+F+DLT  E+R+ YLG R    R++  
Sbjct: 69  DQDKRFNIFKDNLRFIDLHNENNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAK 128

Query: 130 PKDADQAPILPTN--DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
            K+ +Q      N  ++P   DWR+KGAV P+KDQG+CGSCW+FSTT A+EG N + TG+
Sbjct: 129 AKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGE 188

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           L+SLSEQ+LVDCD         S + GCNGGLM+ AF++ +K GGL  E+DYPY G   G
Sbjct: 189 LISLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFG-G 239

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYI 305
               F K+    S+  +  V   ++      +   P++VAI A     Q Y  G+     
Sbjct: 240 KCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGS- 298

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           C   LDH V+ VGYGS            YWI++NSWG  WGE GY ++ R
Sbjct: 299 CGTNLDHAVVAVGYGSENGV-------DYWIVRNSWGPRWGEEGYIRMER 341


>gi|297830592|ref|XP_002883178.1| hypothetical protein ARALYDRAFT_479457 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329018|gb|EFH59437.1| hypothetical protein ARALYDRAFT_479457 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 452

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/310 (41%), Positives = 176/310 (56%), Gaps = 30/310 (9%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLR-R 125
           K Y    E + RF IF  NL+    H  + P+ T   G+T+F+DLT  EFR  YL  +  
Sbjct: 52  KNYNGLGEKETRFEIFTDNLKYIEEHNSV-PNQTFEVGLTRFADLTNDEFRAIYLRSKME 110

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
           + R+P   ++      + LP   DWR KGAV PVKDQG+CGSCW+FS  GA+EG N + T
Sbjct: 111 RTRVPVKGERYLYKVGDTLPDQIDWRAKGAVNPVKDQGNCGSCWAFSAIGAVEGINQIKT 170

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           G+L+SLSEQ+LVDCD         S + GC GGLM+ AF++ ++ GG+  EEDYPYT TD
Sbjct: 171 GELISLSEQELVDCDT--------SYNGGCGGGLMDYAFKFIIENGGIDTEEDYPYTATD 222

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCP 303
                   K+    ++  +  V  ++++     + N P++VAI A     Q Y  GV   
Sbjct: 223 DNICNSDKKNSRVVTIDGYEDVPQNDEKSLKKALANQPISVAIEAGGRAFQLYKSGVFTG 282

Query: 304 YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV---- 359
             C   LDHGV+ VGYGS G        + YWI++NSWG +WGE+GY+K+   RN+    
Sbjct: 283 -TCGTSLDHGVVAVGYGSEG-------GQDYWIVRNSWGSNWGESGYFKL--ERNIKESS 332

Query: 360 --CGVDSMVS 367
             CGV  M S
Sbjct: 333 GKCGVAMMAS 342


>gi|158524604|gb|ABW71226.1| cysteine protease [Nicotiana tabacum]
          Length = 360

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/350 (39%), Positives = 181/350 (51%), Gaps = 33/350 (9%)

Query: 28  VDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTIF 84
           V+  IRQV   G   L   E+    ++G   H   F  F  ++ K Y S EE   RF +F
Sbjct: 29  VENPIRQVVSDG---LHELENGILQVVGQSRHALSFVRFAHRYGKRYESVEEIKQRFEVF 85

Query: 85  KANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL 144
             NL+    H K   S   G+ +F+DLT  EFRR  LG  +        +    L    L
Sbjct: 86  LDNLKMIRSHNKKGLSYKLGVNEFTDLTWDEFRRDRLGAAQNCSATTKGNVK--LTNAVL 143

Query: 145 PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECD 204
           P   DWRE G V PVK+QG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +
Sbjct: 144 PETKDWREDGIVSPVKNQGKCGSCWTFSTTGALEAAYSQAFGKGISLSEQQLVDCAGAFN 203

Query: 205 PEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV--- 261
                  + GCNGGL + AFEY    GGL  EE YPYTG  +   CKF    +   V   
Sbjct: 204 -------NFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTG--KNGLCKFSSENVGVKVIDS 254

Query: 262 ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLLV 317
            N ++ + DE + A  LV+  P+++A   +   + Y  GV     C      ++H VL V
Sbjct: 255 VNITLGAEDELKYAVALVR--PVSIAFEVIKGFKQYKSGVYSSTECGNTPMDVNHAVLAV 312

Query: 318 GYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
           GYG            PYW+IKNSWG  WG++GY+K+  G+N+CG+ +  S
Sbjct: 313 GYGVENGV-------PYWLIKNSWGADWGDDGYFKMEMGKNMCGIATCAS 355


>gi|426369382|ref|XP_004051670.1| PREDICTED: cathepsin F [Gorilla gorilla gorilla]
          Length = 517

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/314 (43%), Positives = 180/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 220 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 279

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 280 IYLNSLLREEPGNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 337

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 338 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 388

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 389 DYSYQG--HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYR 446

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 447 HGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLH 499

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 500 RGSGACGVNTMASS 513


>gi|343473977|emb|CCD14279.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/316 (38%), Positives = 173/316 (54%), Gaps = 21/316 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG C S W+F+  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD         + D GC  G M++AF++ +    G +
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCD---------TNDLGCRAGFMDTAFKWIVSPNDGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G     AC      + A++ +   +  +E+ IA  L KNGP+A+A++A  
Sbjct: 209 FTEQSYPYASGGGNVPACNKSGKVVGANIRDHVHILDNENAIAEWLAKNGPVAIAVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q Y GGV    I S+ ++   LLVGY           + PYWIIKNSWG+ WGE GY +
Sbjct: 269 FQRYTGGVLTSCI-SKEVNSAALLVGYDDT-------SKPPYWIIKNSWGKGWGEEGYIR 320

Query: 353 ICRGRNVCGVDSMVST 368
           I +G N C +   VS+
Sbjct: 321 IEKGTNQCRMKDYVSS 336


>gi|302790836|ref|XP_002977185.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
 gi|300155161|gb|EFJ21794.1| hypothetical protein SELMODRAFT_106228 [Selaginella moellendorffii]
          Length = 299

 Score =  219 bits (557), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/317 (39%), Positives = 174/317 (54%), Gaps = 32/317 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHGITQFSDLTPAEFRR 118
           F  +  K  K+Y+S  E   R  IF   L    +H  + + + T G+ +FSDLT AEFR 
Sbjct: 2   FEDWAAKHGKSYSSDSEKARRLMIFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRA 61

Query: 119 TYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
            Y+G   K + P+  D+ P     +  + LP   DWR++GAV P+KDQG CGSCW+FS  
Sbjct: 62  NYVG---KFKSPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAI 118

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
            ++E A+FLAT +LVSLSEQQL+DCD         + D GC GG    AF++ ++ GG+ 
Sbjct: 119 ASIESAHFLATKELVSLSEQQLIDCD---------TVDQGCQGGFPEDAFKFVVENGGVT 169

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI--NAVY 292
            EE YPYTG     +C  +K+K+   +  +  V+ D        V   P+ V I  +   
Sbjct: 170 TEEAYPYTGF--AGSCNANKNKV-VEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQN 226

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q Y  G+     CS   DH VL++GYG+ G         PYWIIKNSWG SWGENG+ K
Sbjct: 227 FQNYRSGILSGQ-CSNSRDHAVLVIGYGTEG-------GMPYWIIKNSWGTSWGENGFMK 278

Query: 353 ICR--GRNVCGVDSMVS 367
           I +  G  +CG++   S
Sbjct: 279 IKKKDGEGMCGMNGQSS 295


>gi|343477446|emb|CCD11725.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 122/316 (38%), Positives = 173/316 (54%), Gaps = 21/316 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG C S W+F+  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD         + D GC  G M++AF++ +    G +
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCD---------TNDLGCRAGFMDTAFKWIVSPNDGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G     AC      + A++ +   +  +E+ IA  L KNGP+A+A++A  
Sbjct: 209 FTEQSYPYASGGGNVPACNKSGKVVGANIDDHVHILDNENAIAEWLAKNGPVAIAVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q Y GGV    I S+ ++   LLVGY           + PYWIIKNSWG+ WGE GY +
Sbjct: 269 FQRYTGGVLTSCI-SKEVNSAALLVGYDDT-------SKPPYWIIKNSWGKGWGEEGYIR 320

Query: 353 ICRGRNVCGVDSMVST 368
           I +G N C +   VS+
Sbjct: 321 IEKGTNQCRMKDYVSS 336


>gi|338712411|ref|XP_001491536.3| PREDICTED: cathepsin F [Equus caballus]
          Length = 459

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/319 (43%), Positives = 181/319 (56%), Gaps = 35/319 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y ++EE   R +IF +N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 162 FKHFVTTYNRTYETKEEAQWRMSIFASNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 221

Query: 119 TYLG--LRR----KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            YL   L+     K+R  K          +  P ++DWR KGAV  VKDQG CGSCW+FS
Sbjct: 222 IYLNPLLKEEPGVKMRRAKSVG-------DSAPPEWDWRSKGAVTEVKDQGMCGSCWAFS 274

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG +EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GG
Sbjct: 275 VTGNVEGQWFLNRGALLSLSEQELLDCD---------KVDKACMGGLPSNAYSAIKTLGG 325

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  E+DY Y G     AC F   K    + +   ++ +E ++AA L K GP++VAINA  
Sbjct: 326 LETEDDYSYHG--HLQACSFSAEKAKVYINDSVELTKNEQKLAAWLAKKGPISVAINAFG 383

Query: 293 MQTYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           MQ Y  G+S P   +CS  L DH VLLVGYG+           P+W IKNSWG  WGE G
Sbjct: 384 MQFYRHGISHPLRPLCSPWLIDHAVLLVGYGNRSAV-------PFWAIKNSWGTDWGEEG 436

Query: 350 YYKICRGRNVCGVDSMVST 368
           YY + RG   CGV++M S+
Sbjct: 437 YYYLYRGSGACGVNTMASS 455


>gi|378943060|gb|AFC76271.1| cathepsin L-like protease [Leishmania major]
          Length = 348

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 130/309 (42%), Positives = 168/309 (54%), Gaps = 25/309 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPYT  +       + S++A  A +  +  +   E  +AA L KNGP+++A++A 
Sbjct: 209 FTEKSYPYTSGNGDVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDAS 268

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
              +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY 
Sbjct: 269 SFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGYV 320

Query: 352 KICRGRNVC 360
           ++  G N C
Sbjct: 321 RVTMGVNAC 329


>gi|151573014|gb|ABS17682.1| cathepsin L-1 [Artemia salina]
          Length = 334

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 138/328 (42%), Positives = 178/328 (54%), Gaps = 30/328 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKLDPSATHGITQ 107
           +LL  E H  LFK    K Y SQ E   R  I+  N  + A+H    +K + S    + +
Sbjct: 21  NLLADEWH--LFKATHKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYHVAMNK 78

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL--PTN-DLPADFDWREKGAVGPVKDQGS 164
           F DL   EFR    G + K +    A+       P N  +P   DWREKGA+ PVKDQG 
Sbjct: 79  FGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVTVPESVDWREKGAITPVKDQGQ 138

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCW+FS+TGALEG  F  TGKLVSLSEQ L+DC  +   E       GCNGGLM+ AF
Sbjct: 139 CGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKYGNE-------GCNGGLMDQAF 191

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGP 283
           +Y     G+  E  YPY   D    C+++ +++ A       + S +ED++ A +   GP
Sbjct: 192 QYIKDNKGIDTENTYPYEAEDD--VCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGP 249

Query: 284 LAVAINAVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           ++VAI+A +   Q Y  GV     C S  LDHGVL+VGYGS          K YW++KNS
Sbjct: 250 VSVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSD-------NGKDYWLVKNS 302

Query: 341 WGESWGENGYYKICRGR-NVCGVDSMVS 367
           W E WG+ GY K+ R R N CGV S  S
Sbjct: 303 WSEHWGDEGYIKMARNRKNHCGVASAAS 330


>gi|359491865|ref|XP_002273243.2| PREDICTED: xylem cysteine proteinase 1-like [Vitis vinifera]
          Length = 351

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 173/317 (54%), Gaps = 28/317 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  K  K+Y S EE  HRF +F+ NL+      K   S   G+ +F+DL+  EF+R 
Sbjct: 48  FESWMSKHGKSYRSFEEKLHRFEVFQDNLKHIDETNKKVSSYWLGLNEFADLSHEEFKRK 107

Query: 120 YLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           YLGL  K+ LPK  D        D   LP   DWR+KGAV  VK+QG+CGSCW+FST  A
Sbjct: 108 YLGL--KIELPKRRDSPEEFSYKDVADLPKSVDWRKKGAVAHVKNQGACGSCWAFSTVAA 165

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG N + TG L +LSEQ+L+DCD           ++GCNGGLM+ AF + +  GGL +E
Sbjct: 166 VEGINQIVTGNLTALSEQELIDCDK--------PFNNGCNGGLMDYAFAFIISNGGLRKE 217

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQ 294
           EDYPY   + G   +  +     +++ +  V  D +Q     + N PL+VAI A     Q
Sbjct: 218 EDYPYV-MEEGTCGEKKEELEVVTISGYHDVPEDNEQSFLKALANQPLSVAIEASSRGFQ 276

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y GG+   + C   LDHGV  VGYG++       K   Y  +KNSWG  WGE GY ++ 
Sbjct: 277 FYSGGIFNGH-CGTELDHGVAAVGYGTS-------KGVDYITVKNSWGSKWGEKGYIRMK 328

Query: 355 RG----RNVCGVDSMVS 367
           R       +CG+  M S
Sbjct: 329 RNVGKPEGICGIYKMAS 345


>gi|281346354|gb|EFB21938.1| hypothetical protein PANDA_009085 [Ailuropoda melanoleuca]
          Length = 333

 Score =  218 bits (556), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 172/311 (55%), Gaps = 22/311 (7%)

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRRTY 120
           K  N    +++E   R  +++ N++   +H +      H     +  F DLT  EF++  
Sbjct: 33  KAANGKLYNKDEEVWRRAVWEKNMKMIDQHNEEYSQGKHSFILAMNAFGDLTNEEFKQVM 92

Query: 121 LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
            GL  K++ P++ +   +LP  + P+  DWREKG V PVKDQG CGSCW+FS TGALEG 
Sbjct: 93  NGL--KIQNPREGNMFQLLPFAETPSSVDWREKGYVTPVKDQGQCGSCWAFSATGALEGQ 150

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
            F  TGKLVSLSEQ LVDC            ++GCNGGLM++AF Y    GGL  EE YP
Sbjct: 151 MFRKTGKLVSLSEQNLVDCSR-------AEGNAGCNGGLMDNAFRYVKDNGGLDSEESYP 203

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA---VYMQTYI 297
           Y   D    CK+   + AA+   F+ +  DE+ +  ++   GP++VAI+A    +   Y 
Sbjct: 204 YLAQD--GRCKYKPEQSAANDTGFADIHQDEESLMLSVATVGPISVAIDASLDTFRFYYK 261

Query: 298 GGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR 357
           G    P   S  LDHGVL+VGYGS        + K YWI+KNSWG  WG  GY  + + R
Sbjct: 262 GIYYDPNCSSEDLDHGVLVVGYGS---DEREAENKNYWIVKNSWGTQWGMQGYILMAKDR 318

Query: 358 -NVCGVDSMVS 367
            N CG+ +  S
Sbjct: 319 GNHCGIATSAS 329


>gi|46395939|sp|Q94B08.2|GCP1_ARATH RecName: Full=Germination-specific cysteine protease 1; Flags:
           Precursor
 gi|4006883|emb|CAB16767.1| cysteine proteinase [Arabidopsis thaliana]
 gi|7270637|emb|CAB80354.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/290 (42%), Positives = 168/290 (57%), Gaps = 27/290 (9%)

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLR----RKLRL 129
           + D RF IFK NLR    H + + +AT+  G+T+F+DLT  E+R+ YLG R    R++  
Sbjct: 69  DQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAK 128

Query: 130 PKDADQAPILPTN--DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
            K+ +Q      N  ++P   DWR+KGAV P+KDQG+CGSCW+FSTT A+EG N + TG+
Sbjct: 129 AKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGE 188

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           L+SLSEQ+LVDCD         S + GCNGGLM+ AF++ +K GGL  E+DYPY G   G
Sbjct: 189 LISLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFG-G 239

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYI 305
               F K+    S+  +  V   ++      +   P++VAI A     Q Y  G+     
Sbjct: 240 KCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVSVAIEAGGRIFQHYQSGIFTGS- 298

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           C   LDH V+ VGYGS            YWI++NSWG  WGE GY ++ R
Sbjct: 299 CGTNLDHAVVAVGYGSENGV-------DYWIVRNSWGPRWGEEGYIRMER 341


>gi|2804262|dbj|BAA24442.1| cysteine proteinase [Sitophilus zeamais]
          Length = 338

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/326 (41%), Positives = 180/326 (55%), Gaps = 30/326 (9%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA----THGITQFSDLT 112
           +  +S FK + +K Y S+ E   R  IF  N  + A+H KL          G+ +++D+ 
Sbjct: 24  QEQWSSFKMQHSKNYDSETEERFRMKIFMENAHKVAKHNKLFSQGFVKFKLGLNKYADML 83

Query: 113 PAEFRRTYLGLRR-KLRLPKDADQAP----ILPTN-DLPADFDWREKGAVGPVKDQGSCG 166
             EF  T  G  + K  + K +D       I P N  LP   DWR+KGAV  VKDQG CG
Sbjct: 84  HHEFVSTLNGFNKTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTEVKDQGHCG 143

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCWSFS TG+LEG +F  TGKLVSLSEQ LVDC            ++GCNGGLM++AF Y
Sbjct: 144 SCWSFSATGSLEGQHFRKTGKLVSLSEQNLVDCSGRYG-------NNGCNGGLMDNAFRY 196

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLA 285
               GG+  E+ YPY   D    C +      A+   F  +   +ED + A +   GP++
Sbjct: 197 IKDNGGIDTEKSYPYLAEDE--KCHYKAQNSGATDKGFVDIEEANEDDLKAAVATVGPVS 254

Query: 286 VAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           +AI+A +   Q Y  GV S P   S+ LDHGVL+VGYG++         + YW++KNSWG
Sbjct: 255 IAIDASHETFQLYSDGVYSDPECSSQELDHGVLVVGYGTSD------DGQDYWLVKNSWG 308

Query: 343 ESWGENGYYKICRGR-NVCGVDSMVS 367
            SWG NGY K+ R + N+CGV S  S
Sbjct: 309 PSWGLNGYIKMARNQDNMCGVASQAS 334


>gi|6649593|gb|AAF21470.1|U85983_1 cysteine proteinase [Clonorchis sinensis]
          Length = 259

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/273 (45%), Positives = 155/273 (56%), Gaps = 26/273 (9%)

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD---FDWREKGAV 156
           +A +G+TQFSDLT  EF+  YL    ++R         + P  D+  D   FDWRE GAV
Sbjct: 5   TAHYGVTQFSDLTSEEFKTRYL----RMRFDGPIVSEDLTPEEDVTMDNEKFDWREHGAV 60

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
           GPV DQG CGSCW+FS  G + G  F  TG L++LSEQQLVDCD+          D GC+
Sbjct: 61  GPVLDQGKCGSCWAFSVIGNVVGQWFRKTGHLLALSEQQLVDCDY---------LDDGCD 111

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GG     +    K GGL    DYPYTG   G  C  DKSK  A V   +++ L E   A 
Sbjct: 112 GGYPPQTYTAIQKMGGLELASDYPYTGV--GGICHMDKSKFVAYVNGSTILPLSEKVQAQ 169

Query: 277 NLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYW 335
            L   GPL+ A+NA  +Q Y GG+  P  C    ++H VL VGYG           KPYW
Sbjct: 170 KLRAIGPLSSALNADTLQLYKGGIMRPKWCDPAGVNHAVLTVGYGVQ-------NGKPYW 222

Query: 336 IIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           I+KNSWGE +GE GY++I RG   CG++S+V+T
Sbjct: 223 IVKNSWGEDFGEEGYFRIYRGDGTCGINSIVTT 255


>gi|91092014|ref|XP_970644.1| PREDICTED: similar to cathepsin-L-like cysteine peptidase 02
           [Tribolium castaneum]
 gi|270001249|gb|EEZ97696.1| cathepsin L precursor [Tribolium castaneum]
          Length = 337

 Score =  218 bits (555), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 136/326 (41%), Positives = 180/326 (55%), Gaps = 29/326 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDL 111
            +  +  FK    K Y S+ E   R  IF  N  + A+H KL      S   G+ ++SD+
Sbjct: 23  VQEQWGAFKVTHKKQYESETEERFRMKIFMENAHKVAKHNKLYAQGLVSFKLGVNKYSDM 82

Query: 112 TPAEFRRTYLGLRRK---LRLPK-DADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCG 166
              EF  T  G  R    LR  + D     I P N +LP   DWR+ GAV PVKDQG CG
Sbjct: 83  LNHEFVHTLNGYNRSKTPLRSGELDESITFIPPANVELPKQIDWRKLGAVTPVKDQGQCG 142

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCWSFSTTG+LEG +F  + KLVSLSEQ L+DC      E+ G  ++GCNGGLM++AF Y
Sbjct: 143 SCWSFSTTGSLEGQHFRKSKKLVSLSEQNLIDCS-----EKYG--NNGCNGGLMDNAFRY 195

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLA 285
               GG+  E+ YPY   D    C +      A+   F  + S DE+++ A +   GP++
Sbjct: 196 IKDNGGIDTEQSYPYKAEDE--KCHYKPRNKGATDRGFVDIESGDEEKLKAAVATVGPIS 253

Query: 286 VAINAVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           VAI+A +   Q Y  GV   P   S +LDHGVL+VGYG+            YW++KNSWG
Sbjct: 254 VAIDASHPTFQQYSEGVYYEPECSSEQLDHGVLVVGYGTDEDG------NDYWLVKNSWG 307

Query: 343 ESWGENGYYKICRGR-NVCGVDSMVS 367
           +SWG+ GY K+ R R N CG+ +  S
Sbjct: 308 DSWGDQGYIKMARNRDNNCGIATQAS 333


>gi|346466067|gb|AEO32878.1| hypothetical protein [Amblyomma maculatum]
          Length = 358

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 134/332 (40%), Positives = 185/332 (55%), Gaps = 31/332 (9%)

Query: 49  TNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHG 104
           T+ +L+GAE  +S FK    K Y S+ E  +R  I+  N  + ARH +       S    
Sbjct: 41  THQELVGAE--WSAFKALHGKEYHSETEEYYRLKIYMENRLKIARHNEKYANNKASYKLA 98

Query: 105 ITQFSDLTPAEFRRTYLGLRRKLR-LPKDAD---QAPILPTNDLPADFDWREKGAVGPVK 160
           + +F DL   EF  T  G +R  R  P++     +   +    LP   DWR+KGAV PVK
Sbjct: 99  MNEFGDLLHHEFVSTRNGFKRNYRSTPREGSFYIEPEGIEDKHLPKTVDWRKKGAVTPVK 158

Query: 161 DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
           +QG CGSCW+FSTTG+LEG +F  TG++VSLSEQ LVDC  +         ++GC GGLM
Sbjct: 159 NQGQCGSCWAFSTTGSLEGQHFRKTGRMVSLSEQNLVDCSGKFG-------NNGCEGGLM 211

Query: 221 NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVK 280
           ++AF+Y    GG+  E  YPY GTD    C F+KS + A+   F  +    +Q+    V 
Sbjct: 212 DNAFKYIKANGGIDTELSYPYNGTDG--ICHFEKSDVGATDTGFVDIPEGNEQLLKKAVA 269

Query: 281 N-GPLAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
             GP++VAI+A +   Q Y  GV   P   S  LDHGVL+VGYG+          + YW+
Sbjct: 270 TVGPVSVAIDASHESFQFYSQGVYDEPECSSESLDHGVLVVGYGTK-------DGQDYWL 322

Query: 337 IKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           +KNSWG +WG++GY  + R + N CG+ S  S
Sbjct: 323 VKNSWGTTWGDDGYIYMTRNKENQCGIASSAS 354


>gi|116781957|gb|ABK22314.1| unknown [Picea sitchensis]
          Length = 369

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/297 (40%), Positives = 166/297 (55%), Gaps = 25/297 (8%)

Query: 75  EEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDAD 134
           EEH  RF IFK N++      K D     G+ +F+DL+  EF+  Y+G +  LR  ++  
Sbjct: 62  EEHAERFEIFKENVKYIDSVNKKDSPYKLGLNKFADLSNEEFKAIYMGTKMDLRGDREVQ 121

Query: 135 QAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLS 192
               +  N   LPA  DWR+KGAV  VK+QG CGSCW+FST  ++EG N++ TG LVSLS
Sbjct: 122 SGSFMYQNSEPLPASIDWRQKGAVAAVKNQGHCGSCWAFSTVASVEGINYITTGNLVSLS 181

Query: 193 EQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG-TDRGHACK 251
           EQQLVDC  E         +SGCNGGLM++AF+Y +  GG++ E++YPYT       + K
Sbjct: 182 EQQLVDCSTE---------NSGCNGGLMDTAFQYIINNGGIVTEDNYPYTAEATECSSTK 232

Query: 252 FDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYICSRR 309
            +       +  F  V  + +Q     V + P++VAI A     Q Y  GV     C   
Sbjct: 233 INSQTTRVVIDGFEDVPANNEQALKEAVAHQPVSVAIEASGQDFQFYSTGVFTGK-CGTA 291

Query: 310 LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG----RNVCGV 362
           LDHGV+ VGYG+   +P  +    YWI++NSWG  WGE GY ++ +G       CG+
Sbjct: 292 LDHGVVAVGYGT---SPEGIN---YWIVRNSWGPKWGEEGYIRMQQGIEAAEGKCGI 342


>gi|110737959|dbj|BAF00916.1| cysteine proteinase [Arabidopsis thaliana]
          Length = 376

 Score =  218 bits (555), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/290 (42%), Positives = 167/290 (57%), Gaps = 27/290 (9%)

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLR----RKLRL 129
           + D RF IFK NLR    H + + +AT+  G+T+F+DLT  E+R+ YLG R    R++  
Sbjct: 69  DQDKRFNIFKDNLRFIDLHNENNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAK 128

Query: 130 PKDADQAPILPTN--DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
            K+ +Q      N  ++P   DWR+KGAV P+KDQG+CGSCW+FSTT A+EG N + TG+
Sbjct: 129 AKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGE 188

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           L+SLSEQ+LVDCD         S + GCNGGLM+ AF++ +K GGL  E+DYPY G   G
Sbjct: 189 LISLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFG-G 239

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYI 305
               F K+    S+  +  V   ++      +   P+ VAI A     Q Y  G+     
Sbjct: 240 KCNSFLKNSRVVSIDGYEDVPTKDETALKKAISYQPVRVAIEAGGRIFQHYQSGIFTGS- 298

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           C   LDH V+ VGYGS            YWI++NSWG  WGE GY ++ R
Sbjct: 299 CGTNLDHAVVAVGYGSENGV-------DYWIVRNSWGPRWGEEGYIRMER 341


>gi|6467382|gb|AAF13146.1|AF136279_1 cathepsin F precursor [Homo sapiens]
          Length = 484

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 180/314 (57%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 187 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 246

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 247 IYLNTLLRKEPGNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 304

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           +G  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 305 KGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 355

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 356 DYSYQG--HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYR 413

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 414 HGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLH 466

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 467 RGSGACGVNTMASS 480


>gi|351693703|gb|AEQ59229.1| cysteine protease precursor [Clonorchis sinensis]
          Length = 327

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/318 (41%), Positives = 183/318 (57%), Gaps = 26/318 (8%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K+Y S ++ ++RF +FK NL R  + Q ++  +A +G+TQFSDLT  
Sbjct: 27  ARQLYEEFKLKYKKSY-SNDDDEYRFRVFKDNLLRIKQFQNMERGTAKYGVTQFSDLTAQ 85

Query: 115 EFRRTYLGLRRKLR-LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EF+  YL  R K   +P D +  P +  +    +FDWR  GAVGPV D+G CGSCW+FS 
Sbjct: 86  EFKVRYL--RSKFGGVPVDREPVPFIRMDVDDDNFDWRNHGAVGPVLDKGDCGSCWAFSA 143

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
            G +EG  F  T  L+ LSEQQL+DCD           D GCNGG    AF+  L  GGL
Sbjct: 144 VGNIEGQWFRKTDNLLQLSEQQLLDCDE---------VDEGCNGGTPQQAFKQILGMGGL 194

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             + DYPY G  R   C+   SK+   +    ++  DE   A  L + GP + A+NA+ +
Sbjct: 195 QLDSDYPYEG--REGQCRMVPSKVKVYINGSKILPEDEQIQAQMLKETGPFSSALNALSL 252

Query: 294 QTYIGGV--SCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           Q Y  G+    P +C ++ L+H VL VGYG  G    RL   PYW +KNSW   +GENGY
Sbjct: 253 QFYTEGILHPLPALCDAQSLNHAVLTVGYGKEG----RL---PYWTVKNSWSTMFGENGY 305

Query: 351 YKICRGRNVCGVDSMVST 368
           ++I RG   CG++++VST
Sbjct: 306 FRIYRGDGPCGINTLVST 323


>gi|49456321|emb|CAG46481.1| CTSF [Homo sapiens]
          Length = 338

 Score =  218 bits (554), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/314 (43%), Positives = 178/314 (56%), Gaps = 25/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 41  FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 100

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA      DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 101 IYLNTLLRKEPGNKMKQAK--SVGDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 158

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL   +
Sbjct: 159 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETVD 209

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 210 DYSYQG--HMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYR 267

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 268 HGISRPLRPLCSPWLIDHAVLLVGYGNRS-------DVPFWAIKNSWGTDWGEKGYYYLH 320

Query: 355 RGRNVCGVDSMVST 368
           RG   CGV++M S+
Sbjct: 321 RGSGACGVNTMASS 334


>gi|356508487|ref|XP_003522988.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 349

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 176/315 (55%), Gaps = 25/315 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  +  K Y S EE  HRF IFK NL+      K+  +   G+ +F+DL+  EF+  
Sbjct: 47  FESWMSRHGKIYQSIEEKLHRFDIFKDNLKHIDERNKVVSNYWLGLNEFADLSHQEFKNK 106

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           YLGL+      +++ +       +LP   DWR+KGAV  VK+QGSCGSCW+FST  A+EG
Sbjct: 107 YLGLKVDYSRRRESPEEFTYKDFELPKSVDWRKKGAVTQVKNQGSCGSCWAFSTVAAVEG 166

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
            N + TG L SLSEQ+L+DCD         + ++GCNGGLM+ AF + ++ GGL +EEDY
Sbjct: 167 INQIVTGNLTSLSEQELIDCDR--------TYNNGCNGGLMDYAFSFIVENGGLHKEEDY 218

Query: 240 PYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           PY   + G  C+  K +    +++ +  V  + +Q     + N PL+VAI A     Q Y
Sbjct: 219 PYI-MEEG-TCEMTKEETEVVTISGYHDVPQNNEQSLLKALVNQPLSVAIEASGRDFQFY 276

Query: 297 IGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
            GGV   + C   LDHGV  VGYG++       K   Y I+KNSWG  WGE GY ++ R 
Sbjct: 277 SGGVFDGH-CGSDLDHGVAAVGYGTS-------KGVNYIIVKNSWGSKWGEKGYIRMRRN 328

Query: 357 ----RNVCGVDSMVS 367
                 +CG+  M S
Sbjct: 329 IGKPEGICGIYKMAS 343


>gi|14349349|gb|AAC38833.2| cysteine protease [Leishmania chagasi]
          Length = 353

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 125/311 (40%), Positives = 167/311 (53%), Gaps = 24/311 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSDLTPA 114
           A  H+  FKK+  K +    E   RF  FK N++ A      +P A + ++ +F+DLTP 
Sbjct: 37  ASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQ 96

Query: 115 EFRRTYLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF + YL      R  KD  +   +           DWREKG V PVK+QG CGSCW+F+
Sbjct: 97  EFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFA 156

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--A 230
           TTG +EG   L    LVSLSEQ LV CD         + D GCNGGLM  A ++ +    
Sbjct: 157 TTGNIEGQWALKNHSLVSLSEQVLVSCD---------NIDDGCNGGLMQQAMQWIINDHN 207

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           G +  E+ YPYT          D   + A +A +  +  DE++IAA + KNGP+AVA++A
Sbjct: 208 GTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIAGYMSLPHDEEEIAAYVGKNGPVAVAVDA 267

Query: 291 VYMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y GGV    +C    L+HGVL+VG+        R  + PYWI+KNSWG SWGE G
Sbjct: 268 TTWQLYFGGVVT--LCFGLSLNHGVLVVGFN-------RQAKPPYWIVKNSWGSSWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YIRLAMGSNQC 329


>gi|395502422|ref|XP_003755580.1| PREDICTED: pro-cathepsin H [Sarcophilus harrisii]
          Length = 334

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 183/322 (56%), Gaps = 37/322 (11%)

Query: 54  LGAEHHFSLFK---KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSD 110
           + AE  F LFK   K+ NK Y   E H HR   F  N RR  +H   + S T  + QFSD
Sbjct: 26  VSAEEKF-LFKSWMKQNNKKYHLSEYH-HRLHTFLENKRRIDKHNAGNHSFTMRLNQFSD 83

Query: 111 LTPAEFRRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCG 166
           ++  EF++TYL     +RLP++        +      P   DWR+KG  V PVK+QG CG
Sbjct: 84  MSFDEFKKTYL-----MRLPQNCSATKGSHVRRLGPYPESVDWRKKGNFVSPVKNQGGCG 138

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FSTTG LE A  +ATGKL+SL+EQQLVDC  + +       + GCNGGL + AFEY
Sbjct: 139 SCWTFSTTGGLESAVAIATGKLLSLAEQQLVDCAQDFN-------NHGCNGGLPSQAFEY 191

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLA 285
            +   G+M E+ YPY G D    CKF  +K  A V + + + + DE+ +   +  + P++
Sbjct: 192 IMYNKGIMGEDTYPYEGKDG--TCKFQPNKAIAFVKDVANITAYDEEAMTEAVAHHNPVS 249

Query: 286 VAINAV--YMQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
            A      ++  + G  S P  CS+   +++H VL VGYG       +    PYWI+KNS
Sbjct: 250 FAFEVTDDFLSYHKGIYSNP-KCSKSPDKVNHAVLAVGYG-------KENGIPYWIVKNS 301

Query: 341 WGESWGENGYYKICRGRNVCGV 362
           WG SWG NGY+ I RG+N+CG+
Sbjct: 302 WGTSWGNNGYFLIERGKNMCGL 323


>gi|15824704|gb|AAL09448.1| cysteine protease [Leishmania donovani]
          Length = 353

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 125/311 (40%), Positives = 167/311 (53%), Gaps = 24/311 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSDLTPA 114
           A  H+  FKK+  K +    E   RF  FK N++ A      +P A + ++ +F+DLTP 
Sbjct: 37  ASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQ 96

Query: 115 EFRRTYLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF + YL      R  KD  +   +           DWREKG V PVK+QG CGSCW+F+
Sbjct: 97  EFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFA 156

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--A 230
           TTG +EG   L    LVSLSEQ LV CD         + D GCNGGLM  A ++ +    
Sbjct: 157 TTGNIEGQWALKNHSLVSLSEQVLVSCD---------NIDDGCNGGLMEQAMQWIINDHN 207

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           G +  E+ YPYT          D   + A +A +  +  DE++IAA + KNGP+AVA++A
Sbjct: 208 GTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIAGYMSLPHDEEEIAAYVGKNGPVAVAVDA 267

Query: 291 VYMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y GGV    +C    L+HGVL+VG+        R  + PYWI+KNSWG SWGE G
Sbjct: 268 TTWQLYFGGVVT--LCFGLSLNHGVLVVGFN-------RQAKPPYWIVKNSWGSSWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YIRLAMGSNQC 329


>gi|118425914|gb|ABK90856.1| cathepsin-L-like cysteine peptidase [Radix peregra]
          Length = 324

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 181/320 (56%), Gaps = 27/320 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           E ++++FK K NK Y+  E+   R+ I++ NL++   H +L          G  +++D+T
Sbjct: 19  EANWAIFKAKHNKTYSGDEDIIRRY-IWQTNLQKIEAHNELYAKGLSTYFLGENKYADMT 77

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFRRT  GLR    L    D    +  + LP   DWR++G V  VKDQG CGSCW+FS
Sbjct: 78  NEEFRRTLSGLRVDKELTP-GDFVSGMFKDSLPTAVDWRKEGYVTEVKDQGQCGSCWAFS 136

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTG+LEG +F AT +LVSLSE  LVDC  +         + GCNGGLM++AF+Y     G
Sbjct: 137 TTGSLEGQHFKATKQLVSLSESNLVDCSKKWG-------NQGCNGGLMDNAFKYIADNKG 189

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   DR   C F K+ + A+   +  + S  ED +   +   GP++VAI+A 
Sbjct: 190 IDTEKSYPYKPEDR--KCNFKKANVGATDKLYKDITSGSEDALQEAVATIGPISVAIDAS 247

Query: 292 Y--MQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y GGV     CS + LDHGVL VGY S            YWI+KNSWG+SWG +
Sbjct: 248 HDSFQLYSGGVYNEKACSTKTLDHGVLAVGYDSK-------NGDDYWIVKNSWGKSWGID 300

Query: 349 GYYKICRG-RNVCGVDSMVS 367
           GY  + R  +N CG+ +M S
Sbjct: 301 GYIWMSRNKKNQCGIATMAS 320


>gi|5231178|gb|AAD41105.1|AF157961_1 cysteine proteinase [Hypera postica]
          Length = 324

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 130/331 (39%), Positives = 182/331 (54%), Gaps = 44/331 (13%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFS 109
           LGA+  F  FK +  K Y +Q E   RF IF  N+R    H  L      S   GI +F+
Sbjct: 22  LGAK--FQAFKLEHGKTYLNQAEESKRFNIFTDNVRAIEAHNALYEQGKVSYKKGINKFT 79

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN-------DLPADFDWREKGAVGPVKDQ 162
           D++  EF         K  L   A + P L T        ++P+  DWR++G V  VKDQ
Sbjct: 80  DMSQEEF---------KTMLTLSASRKPTLETTSYVKTGVEIPSSVDWRKEGRVTGVKDQ 130

Query: 163 GSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNS 222
           G CGSCW+FS TG+ EGA    +GKLVSLSEQQL+DC   C         +GC+GG ++ 
Sbjct: 131 GDCGSCWAFSITGSTEGAYARKSGKLVSLSEQQLIDC---CT-----DTSAGCDGGSLDD 182

Query: 223 AFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKN 281
            F+Y +K  GL  EE Y Y G D   ACK++ + +   V+ + S+ + DED +   +   
Sbjct: 183 NFKYVMK-DGLQSEESYTYKGED--GACKYNVASVVTKVSKYTSIPAEDEDALLEAVATV 239

Query: 282 GPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           GP++V ++A Y+ +Y  G+     CS   L+H +L VGYG+          K YWIIKNS
Sbjct: 240 GPVSVGMDASYLSSYDSGIYEDQDCSPAGLNHAILAVGYGTE-------NGKDYWIIKNS 292

Query: 341 WGESWGENGYYKICRGRNVCGV--DSMVSTV 369
           WG SWGE GY+++ RG+N CG+  D++  T+
Sbjct: 293 WGASWGEQGYFRLARGKNQCGISEDTVYPTI 323


>gi|390337642|ref|XP_780653.3| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/318 (42%), Positives = 173/318 (54%), Gaps = 32/318 (10%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH-----GITQFSDLTPAEFR 117
           +K +  K Y S EE   R  I++ NL    +H  L     H     GI QF+DL   EF 
Sbjct: 31  WKNEHGKRYLSDEEEASRRLIWQKNLDIVIKHN-LKYDLGHFTYDLGINQFTDLQNEEFV 89

Query: 118 RTYLGLRRKLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
               G R      K A  +  LP N   +LP   DWR KG V PVKDQG CGSCW+FSTT
Sbjct: 90  AMMTGFRVS-GTSKAAKGSTFLPPNNVGELPKTVDWRTKGYVTPVKDQGQCGSCWAFSTT 148

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G++EG +F ATGKLVSLSEQ LVDC            D+GC+GG M+ AF+Y + AGG+ 
Sbjct: 149 GSVEGQHFKATGKLVSLSEQNLVDCSGR---------DAGCDGGFMDRAFQYIIDAGGID 199

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVYM 293
            E  YPY   D    C F K+ + A+V  ++ V S  E  +   +   GP++VAI+A +M
Sbjct: 200 TEASYPYKAVDG--KCHFKKANVGATVTGYTDVTSGSEKALQKAVAHVGPISVAIDASHM 257

Query: 294 --QTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             Q Y  GV     C S  LDHGVL VGYG++           YWI+KNSW E+WG NGY
Sbjct: 258 SFQHYKSGVYNEPGCDSTVLDHGVLAVGYGTSS------DGTDYWIVKNSWAETWGMNGY 311

Query: 351 YKICRGR-NVCGVDSMVS 367
             + R + N CG+ +  S
Sbjct: 312 VWMSRNKDNQCGIATNAS 329


>gi|71482942|gb|AAZ32410.1| cysteine proteinase aleuran type [Nicotiana benthamiana]
          Length = 360

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 136/346 (39%), Positives = 180/346 (52%), Gaps = 33/346 (9%)

Query: 32  IRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           IRQ+   G   L   E+    ++G   H   F+ F  ++ K Y + EE   RF +F  NL
Sbjct: 33  IRQIVSDG---LHELENGILQVVGKTRHALLFARFAHRYGKRYETVEEIKQRFEVFLDNL 89

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
           +    H K   S   G+ +F+D+T  EFRR  LG  +        +    L    LP   
Sbjct: 90  KMIRSHNKKGLSYKLGVNEFTDITWDEFRRDRLGAAQNCSATTKGNLK--LTNVVLPETK 147

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWRE G V PVK+QG CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +    
Sbjct: 148 DWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYGQAFGKGISLSEQQLVDCAGAFN---- 203

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFS 265
              + GCNGGL + AFEY    GGL  EE YPYTG  +   CKF    +   V    N +
Sbjct: 204 ---NFGCNGGLPSQAFEYIKSNGGLDTEEAYPYTG--KNGLCKFSSENVGVKVIDSVNIT 258

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLLVGYGS 321
           + + DE + A  LV+  P+++A   +   + Y  GV     C      ++H VL VGYG 
Sbjct: 259 LGAEDELKYAVALVR--PVSIAFEVIKGFKQYKSGVYTSTECGNTPMDVNHAVLAVGYGV 316

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
                      PYW+IKNSWG  WG+NGY+K+  G+N+CG+ +  S
Sbjct: 317 ENGV-------PYWLIKNSWGADWGDNGYFKMEMGKNMCGIATCAS 355


>gi|388890776|gb|AFK80364.1| cysteine proteinase 3, partial [Acanthamoeba castellanii]
          Length = 329

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/314 (40%), Positives = 179/314 (57%), Gaps = 24/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F+ + +  +K+Y S EE   R+ +++ N +    H + + ++   + +F DLT AEF + 
Sbjct: 30  FAEWMRDNSKSY-SNEEFVFRWNVWRENQQLIEEHNRSNKTSFLAMNKFGDLTNAEFNKL 88

Query: 120 YLGLRRKLRLPKDADQA-PILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           + GL        +   A   +P   L ADFDWR+KGAV  VK+QG CGSCWSFSTTG+ E
Sbjct: 89  FKGLAFDYSFHANKAAAEKAVPAPGLSADFDWRQKGAVTHVKNQGQCGSCWSFSTTGSTE 148

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSC-DSGCNGGLMNSAFEYTLKAGGLMREE 237
           GANFL TG+L SLSEQ L+DC         GS  ++GCNGGLM+ AFEY +   G+  E 
Sbjct: 149 GANFLKTGRLTSLSEQNLIDC--------SGSYGNNGCNGGLMDYAFEYIINNKGIDTEA 200

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQT 295
            YPY      + C+++ +    S+ +++ VS  ++    N V   P +VAI+A +   Q 
Sbjct: 201 SYPYQTAQ--YTCQYNPANSGGSLTSYTDVSSGDENALLNAVATEPTSVAIDASHNSFQF 258

Query: 296 YIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y GGV     CS  +LDHGVL VG+G+          + YW++KNSWG  WG  GY K+ 
Sbjct: 259 YSGGVYYESACSSTQLDHGVLAVGWGTE-------DGQDYWLVKNSWGADWGLAGYIKMA 311

Query: 355 RGR-NVCGVDSMVS 367
           R R N CG+ +  S
Sbjct: 312 RNRSNNCGIATSAS 325


>gi|157864847|ref|XP_001681132.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124426|emb|CAJ02282.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 443

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 170/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G      + + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAVKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|68304200|ref|YP_249668.1| VCATH [Chrysodeixis chalcites nucleopolyhedrovirus]
 gi|67973029|gb|AAY83995.1| VCATH [Chrysodeixis chalcites nucleopolyhedrovirus]
          Length = 344

 Score =  218 bits (554), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 138/374 (36%), Positives = 196/374 (52%), Gaps = 40/374 (10%)

Query: 4   KTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLF 63
           K ++LF V   VF+   SG   + VD +I  VT      L +      +L  A  +F  F
Sbjct: 2   KKIILFFV--FVFA---SGGFDNGVDAIIDYVTAAPQFKLQY------NLERAPQYFETF 50

Query: 64  KKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL 123
           + K+ K YA   E D+R+ IFK NL       + + SA + I +F+DLT  E    + GL
Sbjct: 51  QTKYKKVYADDNERDYRYKIFKTNLEIINLKNQQNDSAVYNINKFADLTKNEVIAKFTGL 110

Query: 124 RRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
             +    K++ +  I+  P+      FDWR+   +  VKDQG CGSCW+FST   LE   
Sbjct: 111 GIRSPALKNSCEPVIVDGPSKYTQETFDWRQFNKITSVKDQGFCGSCWAFSTIAGLESQY 170

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
            +   + V LSEQQLVDCD         + D GC GGL+++A+E  +  GGL  EEDYPY
Sbjct: 171 AIKYNEHVDLSEQQLVDCD---------TIDMGCAGGLLHTAYEEIMAMGGLEYEEDYPY 221

Query: 242 TGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV 300
                   C+    K   SV N +  V   ED++   L + GP+AVA++AV +  Y GG+
Sbjct: 222 RSVQ--GPCRLQSDKFEVSVDNCYRYVLYSEDKLKDVLHEMGPIAVAVDAVDLTDYYGGI 279

Query: 301 --SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRN 358
             SC    +  L+H VLLVGYG            P+W++KNSWG  +GENG+ ++ R  N
Sbjct: 280 ITSCK---NYGLNHAVLLVGYGIENGV-------PFWVLKNSWGSDYGENGFVRVKRNVN 329

Query: 359 VCGVDSMVSTVAAA 372
            CG   M++ +AA+
Sbjct: 330 SCG---MINELAAS 340


>gi|156371477|ref|XP_001628790.1| predicted protein [Nematostella vectensis]
 gi|156215775|gb|EDO36727.1| predicted protein [Nematostella vectensis]
          Length = 330

 Score =  218 bits (554), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/318 (41%), Positives = 172/318 (54%), Gaps = 23/318 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  +  +K    K Y +  E   R  I++ NL++  +H     S T  +    DLT  EF
Sbjct: 25  EQQWQAWKLFHTKKYTTVTEEGARKAIWRDNLKKIQKHNAEGHSFTLAMNHLGDLTQDEF 84

Query: 117 RRTYLGLRRKL-RLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           R  Y G+R       K    A + P++  +P   DWR++G V PVK+QG CGSCW+FSTT
Sbjct: 85  RYFYTGMRSHYSNYTKKQGSAFLAPSHVQVPDTVDWRKEGYVTPVKNQGQCGSCWAFSTT 144

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G+LEG NF  TGKLVSLSEQ LVDC            ++GC GGLM+ AF+Y  + GG+ 
Sbjct: 145 GSLEGQNFKKTGKLVSLSEQNLVDC-------STAYGNNGCQGGLMDYAFKYIKENGGID 197

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYM 293
            EE YPY    R   C+F KS I A    F  V   DE+ +       GP++VAI+A +M
Sbjct: 198 TEESYPYEA--RNDRCRFQKSNIGAVDTGFVDVTHGDEEALKTAAGTVGPISVAIDAGHM 255

Query: 294 --QTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             Q Y  GV     CS   LDHGVL+VGYG+        +   YW++KNSWGE WG  GY
Sbjct: 256 SFQFYHSGVYNNAGCSSTSLDHGVLVVGYGT-------YQGSDYWLVKNSWGERWGMEGY 308

Query: 351 YKICRGR-NVCGVDSMVS 367
             + R + N CGV +  S
Sbjct: 309 IMMSRNKNNQCGVATQAS 326


>gi|17384029|emb|CAD12392.1| cysteine proteinase [Leishmania infantum]
          Length = 354

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/319 (39%), Positives = 170/319 (53%), Gaps = 24/319 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSDLTPA 114
           A  H+  FKK+  K +    E   RF  FK N++ A      +P A + ++ +F+DLTP 
Sbjct: 38  ASAHYGRFKKRHGKPFGEDAEEGRRFNAFKQNMQTAYFLNAHNPHAHYDVSGKFADLTPQ 97

Query: 115 EFRRTYLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF + YL      R  KD  +   +           DWREKG V PVK+QG CGSCW+F+
Sbjct: 98  EFAKLYLNPNYYARHGKDYKEHVHVDDSVRSGVMSVDWREKGVVTPVKNQGMCGSCWAFA 157

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--A 230
           TTG +EG   L    LVSLSEQ LV CD         + D GCNGGLM  A ++ +    
Sbjct: 158 TTGNIEGQWALKNHSLVSLSEQVLVSCD---------NIDDGCNGGLMQQAMQWIINDHN 208

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           G +  E+ YPYT          D   + A +  +  +  DE++IAA + KNGP+AVA++A
Sbjct: 209 GTVPTEDSYPYTSAGGTRPPCHDNGTVGAKIKGYMSLPHDEEEIAAYVGKNGPVAVAVDA 268

Query: 291 VYMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y GGV    +C    L+HGVL+VG+        R  + PYWI+KNSWG SWGE G
Sbjct: 269 TTRQLYFGGVVT--LCFGLSLNHGVLVVGFN-------RQAKPPYWIVKNSWGSSWGEKG 319

Query: 350 YYKICRGRNVCGVDSMVST 368
           Y ++  G N C + + V T
Sbjct: 320 YIRLAMGSNQCLLKNYVVT 338


>gi|410974700|ref|XP_003993781.1| PREDICTED: cathepsin F [Felis catus]
          Length = 459

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 137/313 (43%), Positives = 178/313 (56%), Gaps = 23/313 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y +QEE   R ++F  N+ RA + Q LD  +A +GIT+FSDLT  EFR 
Sbjct: 162 FKEFVTTYNRTYGTQEEAQWRLSVFSNNMVRAQKIQALDRGTAQYGITKFSDLTEEEFRA 221

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            YL    K    K    A  +  +  P ++DWR KGAV  VK+QG CGSCW+FS TG +E
Sbjct: 222 IYLNPLLKENRNKMMHLAKSI-GDHAPPEWDWRTKGAVTNVKNQGMCGSCWAFSVTGNVE 280

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+D
Sbjct: 281 GQWFLKQGDLLSLSEQELLDCD---------KVDKACLGGLPSNAYLAIKNLGGLETEDD 331

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIG 298
           Y Y+G      C F   K    + +   +S +E ++AA L K GP++VAINA  MQ Y  
Sbjct: 332 YSYSG--HLQTCSFSAKKAKVYINDSVELSQNEQKLAAWLAKKGPISVAINAFGMQFYRR 389

Query: 299 GVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           G+S P   +CS  L DH VLLVGYG+           P+W IKNSWG  WGE GYY + R
Sbjct: 390 GISHPLRPLCSPWLIDHAVLLVGYGNRSGI-------PFWAIKNSWGTDWGEEGYYYLYR 442

Query: 356 GRNVCGVDSMVST 368
           G   CGV++M S+
Sbjct: 443 GSGACGVNAMASS 455


>gi|301769893|ref|XP_002920368.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
          Length = 503

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 172/311 (55%), Gaps = 22/311 (7%)

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRRTY 120
           K  N    +++E   R  +++ N++   +H +      H     +  F DLT  EF++  
Sbjct: 33  KAANGKLYNKDEEVWRRAVWEKNMKMIDQHNEEYSQGKHSFILAMNAFGDLTNEEFKQVM 92

Query: 121 LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
            GL  K++ P++ +   +LP  + P+  DWREKG V PVKDQG CGSCW+FS TGALEG 
Sbjct: 93  NGL--KIQNPREGNMFQLLPFAETPSSVDWREKGYVTPVKDQGQCGSCWAFSATGALEGQ 150

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
            F  TGKLVSLSEQ LVDC            ++GCNGGLM++AF Y    GGL  EE YP
Sbjct: 151 MFRKTGKLVSLSEQNLVDCSR-------AEGNAGCNGGLMDNAFRYVKDNGGLDSEESYP 203

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA---VYMQTYI 297
           Y   D    CK+   + AA+   F+ +  DE+ +  ++   GP++VAI+A    +   Y 
Sbjct: 204 YLAQD--GRCKYKPEQSAANDTGFADIHQDEESLMLSVATVGPISVAIDASLDTFRFYYK 261

Query: 298 GGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR 357
           G    P   S  LDHGVL+VGYGS        + K YWI+KNSWG  WG  GY  + + R
Sbjct: 262 GIYYDPNCSSEDLDHGVLVVGYGS---DEREAENKNYWIVKNSWGTQWGMQGYILMAKDR 318

Query: 358 -NVCGVDSMVS 367
            N CG+ +  S
Sbjct: 319 GNHCGIATSAS 329



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/101 (37%), Positives = 48/101 (47%), Gaps = 6/101 (5%)

Query: 258 AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV---YMQTYIGGVSCPYICSRRLDHGV 314
           AA V     V   E+ +   +   GP++ AI A    +     G    P   S  LDHGV
Sbjct: 391 AADVTGPVNVPQQEEAVMLAVAAGGPVSAAIRASLGSFQFCKEGIYYDPNCSSEDLDHGV 450

Query: 315 LLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           L+VGYGS        + K YWI+KNSWG  WG  GY  + R
Sbjct: 451 LVVGYGSD---EREAENKNYWIVKNSWGTDWGLQGYMLLVR 488


>gi|18308182|gb|AAL67857.1|AF462309_1 cysteine proteinase [Acanthamoeba healyi]
          Length = 330

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/313 (41%), Positives = 178/313 (56%), Gaps = 28/313 (8%)

Query: 67  FNKAYASQEEHDHRFT------IFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTY 120
           F K      + ++RF       I++ N+ R   H + + S    + QF DLT AEF R +
Sbjct: 30  FAKWMRENTKSNYRFVYSNEEFIYRWNVWRDEEHNRQNKSYFLAMNQFGDLTNAEFNRLF 89

Query: 121 LGLRRKL-RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
            GL     +  K    AP  P   +P++FDWR+KGAV  VK+QG CGSCWSFSTTG+ EG
Sbjct: 90  KGLAFDYSKHAKIHTAAPEAPATGIPSEFDWRQKGAVTHVKNQGQCGSCWSFSTTGSTEG 149

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
           ANFL TG+LVSLSEQ L+DC            ++GCNGGLM+ AFEY +   G+  E  Y
Sbjct: 150 ANFLKTGRLVSLSEQNLIDCSVSYG-------NNGCNGGLMDYAFEYIINNRGIDTEASY 202

Query: 240 PYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           PY  T     C+++ +    S+  ++ V S DE+ +    VK  P++VAI+A +   Q Y
Sbjct: 203 PYQ-TAGPLTCQYNAANKGGSLTGYTDVTSGDENALLNAAVKE-PVSVAIDASHNSFQFY 260

Query: 297 IGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
            GGV     CS  +LDHGVL+VG+GS          + +W +KNSWG SWG NGY K+ R
Sbjct: 261 SGGVYYESACSSTQLDHGVLVVGWGSE-------NGQDFWWVKNSWGASWGLNGYIKMSR 313

Query: 356 GR-NVCGVDSMVS 367
            + N CG+ +  S
Sbjct: 314 NQNNNCGIATAAS 326


>gi|1581746|prf||2117247B Cys protease:ISOTYPE=2
          Length = 467

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/310 (40%), Positives = 165/310 (53%), Gaps = 23/310 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK++  K Y S  E   R  +FK NL  A  H   +P A+ G+T FSDLT  EFR 
Sbjct: 37  QFAAFKQRHGKVYGSAAEEAFRLGVFKENLLFARLHAAANPHASFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPILPT---NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
            Y          +   + P+         PA  DWR +GAV  +KDQG CGSCW+FST G
Sbjct: 97  RYHNAAAHFAAAQKRVRVPVEVEVEVGGAPAAVDWRARGAVTAIKDQGGCGSCWAFSTIG 156

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGGL 233
            +EG   LA   L  LSEQ LV CD+          D+GC+GGLM+SAF++ +    G +
Sbjct: 157 NIEGQWHLAGNPLTGLSEQMLVSCDNA---------DNGCDGGLMDSAFDWIVGQNNGSV 207

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E  Y Y +G      C      + A ++    +  DED++AA L  NGPLA+A++A  
Sbjct: 208 YTEASYSYVSGGGDSQTCNMSSHVVGAVISGHVDLPQDEDKMAAWLAVNGPLAIAVDATS 267

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
             +Y GGV    + S +LDHGV+LVGY  +          PYWIIKNSWG  WGE GY +
Sbjct: 268 FMSYTGGVLTNCV-SDQLDHGVVLVGYNDS-------SNPPYWIIKNSWGADWGEEGYIR 319

Query: 353 ICRGRNVCGV 362
           I +G N C V
Sbjct: 320 IQKGTNQCLV 329


>gi|156398078|ref|XP_001638016.1| predicted protein [Nematostella vectensis]
 gi|156225133|gb|EDO45953.1| predicted protein [Nematostella vectensis]
          Length = 326

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/318 (38%), Positives = 169/318 (53%), Gaps = 20/318 (6%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTP 113
            G +  +  +K    K+Y+   E   R  I++ NL +  RH   D S    +    DLT 
Sbjct: 21  FGQDSEWVAWKSYHGKSYSDVHEERTRMAIWQQNLEKIKRHNAEDHSYKMAMNHLGDLTE 80

Query: 114 AEFRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            EFR  YLG+R      K      + P+N  +P+  DW +KG V  VK+QG CGSCW+FS
Sbjct: 81  DEFRYFYLGVRAHHNSTKRGWATYMPPSNVKIPSSVDWSQKGYVTGVKNQGQCGSCWAFS 140

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTG++EG +F  TG LVSLSEQ L+DC            ++GC GGLM++AF Y    GG
Sbjct: 141 TTGSVEGQHFRKTGSLVSLSEQNLIDCSGSYG-------NNGCQGGLMDNAFRYIESNGG 193

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAV 291
           +  E  YPY G     +C F  S + A V  +  +    +Q   + V   GP++VA++A 
Sbjct: 194 IDTESSYPYLGQQG--SCHFSSSHVGARVTGYQDIPQGSEQALQSAVATVGPVSVAVDAS 251

Query: 292 YMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             Q Y  GV   PY  S +LDHGVL++GYG+          + YW++KNSWG SWG  GY
Sbjct: 252 QWQFYSSGVYDNPYCSSTQLDHGVLVIGYGN-------YNGQDYWLVKNSWGYSWGVEGY 304

Query: 351 YKICRGR-NVCGVDSMVS 367
             + R + N CG+ S  S
Sbjct: 305 IMMSRNKNNQCGIASSAS 322


>gi|2780176|emb|CAA71085.1| cystein proteinase [Leishmania mexicana]
          Length = 443

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 130/310 (41%), Positives = 170/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD           D+GC+GGLM  AF++ L+   G L
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCD---------DMDNGCSGGLMLQAFDWLLQNTNGHL 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S    + A +    ++   E  +AA L KNGP+A+A++A
Sbjct: 209 YTEDSYPYV-SGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I  ++L+HGVLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct: 268 SSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVVMGVNAC 329


>gi|1730100|sp|P36400.2|LMCPB_LEIME RecName: Full=Cysteine proteinase B; Flags: Precursor
 gi|899313|emb|CAA90236.1| LmCPb2.8 [Leishmania mexicana]
          Length = 443

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G L
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S    + A +    ++   E  +AA L KNGP+A+A++A
Sbjct: 209 HTEDSYPYV-SGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I  ++L+HGVLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct: 268 SSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVVMGVNAC 329


>gi|405958751|gb|EKC24845.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 127/320 (39%), Positives = 175/320 (54%), Gaps = 26/320 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSATHGITQFSDLT 112
           +  + L+ K   K Y ++EE   R  I++ NL    +H     + D S   G+ ++ D+T
Sbjct: 24  DSEWQLYLKAHGKQYGAEEEARRR-VIWEGNLDYIEKHNLAADRGDYSFWLGMNEYGDMT 82

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR T  G + +    + +   P     DLP   DWR KG V P+K+QG CGSCWSFS
Sbjct: 83  NEEFRSTMNGYKMRNGTSRGSLYLPPSNIGDLPDTVDWRPKGYVTPIKNQGQCGSCWSFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG  F  TGKL SLSEQ LVDC  +         + GC GGLM+ AF+Y     G
Sbjct: 143 ATGSLEGQTFKKTGKLPSLSEQNLVDCSQK-------QGNHGCQGGLMDDAFQYIKDNNG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E  YPY    +   C+F+ + + A+ + F+ + S  E  + + +   GP+AVAI+A 
Sbjct: 196 IDTESSYPYEA--KNGKCRFNAANVGATDSGFTDIKSKSESDLQSAVATVGPIAVAIDAS 253

Query: 292 YM--QTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +M  Q Y  GV   + CS  RLDHGVL VGYG+          K YW++KNSWGESWG+ 
Sbjct: 254 HMSFQLYKSGVYHEFFCSETRLDHGVLAVGYGTE-------SGKDYWLVKNSWGESWGQK 306

Query: 349 GYYKICRG-RNVCGVDSMVS 367
           GY  + R  RN CG+ +  S
Sbjct: 307 GYIMMSRNKRNNCGIATSAS 326


>gi|390337645|ref|XP_001199228.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 172/318 (54%), Gaps = 32/318 (10%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH-----GITQFSDLTPAEFR 117
           +K +  K Y S EE   R  I++ NL    RH  L     H     G+ QF+DL   EF 
Sbjct: 31  WKNEHGKRYLSDEEEASRRLIWQKNLDIVIRHN-LKYDLGHFTYDLGMNQFADLQNKEFV 89

Query: 118 RTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
               G R      K A  +  LP N+   LP   DWR KG V PVKDQG CGSCW+FS T
Sbjct: 90  AMMTGFRVN-GTSKAAKGSTFLPPNNVGKLPKTVDWRTKGYVTPVKDQGQCGSCWAFSAT 148

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G+LEG +F  TGKLVSLSEQ LVDC  +         + GCNGGLM+ AF+Y + AGG+ 
Sbjct: 149 GSLEGQHFKKTGKLVSLSEQNLVDCSDK---------NYGCNGGLMDRAFQYIIDAGGID 199

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVY- 292
            EE YPY   D    C F  + + A+V  ++ V S  E  +   +   GP++VAI+A + 
Sbjct: 200 TEESYPYIAMDGN--CHFKTANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDASHF 257

Query: 293 -MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             Q Y  GV + P   S  LDHGVL VGYG+       +    YWI+KNSW E+WG NGY
Sbjct: 258 SFQLYQSGVYNEPGCSSTLLDHGVLAVGYGTT------IDGTDYWIVKNSWAETWGMNGY 311

Query: 351 YKICRGR-NVCGVDSMVS 367
             + R + N CG+ +  S
Sbjct: 312 IWMSRNKDNQCGIATQAS 329


>gi|161598418|gb|ABX74953.1| cysteine protease [Leishmania panamensis]
          Length = 441

 Score =  217 bits (553), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 170/312 (54%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + + YA+  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKQTYKRVYATLAEEQQRVANFQRNLELMREHQANNPHARFGITKFFDLSEAEFATR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G     +  K A Q       DL   PA  DWR+ GAV PV DQG+CGSCW+FS  G
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTAPAAVDWRQMGAVTPVNDQGACGSCWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGGL 233
            +E   ++ T  L++LSEQ+LV CD           D GCNGGLM  AF++ L  K G +
Sbjct: 158 NIESQWYVTTHSLITLSEQELVSCD---------DVDEGCNGGLMLQAFDWLLNNKNGAV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
                YPY  +  G   +  +S    + A +     +  +ED +AA L  NGP+A+A++A
Sbjct: 209 YTGASYPYV-SGNGSVPECSESSELVVGAYIDGHVTIESNEDTMAAWLAVNGPIAIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y GG+  SC     R+L+HGVLLVGY   G       E PYW+IKNSWGE+WGE 
Sbjct: 268 SAFMSYTGGILTSCD---GRQLNHGVLLVGYNMTG-------EVPYWLIKNSWGENWGEK 317

Query: 349 GYYKICRGRNVC 360
           GY ++ +G N C
Sbjct: 318 GYVRVRKGTNEC 329


>gi|157864843|ref|XP_001681130.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124424|emb|CAJ02280.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 130/309 (42%), Positives = 168/309 (54%), Gaps = 25/309 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPYT T        + S++A  A +  +  +   E  +AA L KNGP+++A++A 
Sbjct: 209 FTEKSYPYTSTFGYVPECSNSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDAS 268

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
              +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWG+ WGE GY 
Sbjct: 269 SFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGKDWGEKGYV 320

Query: 352 KICRGRNVC 360
           ++  G N C
Sbjct: 321 RVTMGVNAC 329


>gi|414585111|tpg|DAA35682.1| TPA: cysteine proteinase Mir3 [Zea mays]
          Length = 468

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 177/321 (55%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E ++ +   A   ++ +     + Y +  E + R+ +F+ NLR    H     + 
Sbjct: 31  IVSYGERSDEE---ARRMYAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAG 87

Query: 102 TH----GITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLG R R  R  K   +       DLP   DWR KGAV
Sbjct: 88  VHSFRLGLNRFADLTNDEYRATYLGARTRPQRERKLGARYHAADNEDLPESVDWRAKGAV 147

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             VKDQGSCGSCW+FST  A+EG N + TG L+SLSEQ+LVDCD         S + GCN
Sbjct: 148 AEVKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNQGCN 199

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AFE+ +  GG+  E+DYPY GTD G      K+    ++ ++  V  ++++   
Sbjct: 200 GGLMDYAFEFIINNGGIDTEKDYPYKGTD-GRCDVNRKNAKVVTIDSYEDVPANDEKSLQ 258

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K Y
Sbjct: 259 KAVANQPVSVAIEAAGTAFQLYSSGIFTG-SCGTALDHGVTAVGYGTE-------NGKDY 310

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI+KNSWG SWGE+GY ++ R
Sbjct: 311 WIVKNSWGSSWGESGYVRMER 331


>gi|401416324|ref|XP_003872657.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|322488881|emb|CBZ24131.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 443

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G L
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S    + A +    ++   E  +AA L KNGP+A+A++A
Sbjct: 209 HTEDSYPYV-SGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I  ++L+HGVLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct: 268 SSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVVMGVNAC 329


>gi|241062152|gb|ACS66748.1| cysteine protease [Leishmania guyanensis]
          Length = 441

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 170/312 (54%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + + YA+  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKQTYKRVYATLAEEQQRVANFQRNLELMREHQANNPHARFGITKFFDLSEAEFATR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G     +  K A Q       DL   PA  DWR+ GAV PVKDQG+CGSCW+ S  G
Sbjct: 98  YLSGATHFAKAKKFASQHYRKVGADLSTAPAAVDWRQMGAVTPVKDQGACGSCWALSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGGL 233
            +E   ++ T  L++LSEQ+LV CD           D GCNGGLM  AF++ L  K G +
Sbjct: 158 NIESQWYVTTHSLITLSEQELVSCD---------DVDEGCNGGLMLQAFDWLLNNKNGAV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
                YPY  +  G   +  +S    + A +     +  +ED +AA L  NGP+A+A++A
Sbjct: 209 YTGASYPYV-SGNGSVPECSESSELVVGAYIDGHVTIESNEDTMAAWLAVNGPIAIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y GG+  SC     R+L+HGVLLVGY   G       E PYW+IKNSWGE+WGE 
Sbjct: 268 SAFMSYTGGILTSCD---GRQLNHGVLLVGYNMTG-------EVPYWLIKNSWGENWGEK 317

Query: 349 GYYKICRGRNVC 360
           GY ++ +G N C
Sbjct: 318 GYVRVRKGTNEC 329


>gi|13507095|gb|AAK28439.1| cysteine protease 3 precursor [Clonorchis sinensis]
          Length = 320

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 133/316 (42%), Positives = 182/316 (57%), Gaps = 29/316 (9%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPA 114
           A   +  FK K+ K+Y S ++ ++RF +FK NL R  + Q ++  +A +G+TQFSDLT  
Sbjct: 27  ARQLYEEFKLKYKKSY-SNDDDEYRFRVFKDNLLRIKQFQNMERGTAKYGVTQFSDLTAQ 85

Query: 115 EFRRTYLGLRRKLR-LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EF+  YL  R K   +P D +  P +  +    +FDWR  GAVGPV DQG CGSCW+FS 
Sbjct: 86  EFKVRYL--RSKFGGVPVDREPVPFIRMDVDDDNFDWRNHGAVGPVLDQGDCGSCWAFSA 143

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
            G +EG  F  T  L+ LSEQQL+DCD           D GCNGG    AF   L  GGL
Sbjct: 144 VGNIEGQWFRKTDNLLQLSEQQLLDCD---------GVDEGCNGGTPQQAFRQILGMGGL 194

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM 293
             + DYPY G  R   C+   SK+   +    ++  DE   A  L + GPL+ A+NA+++
Sbjct: 195 QLDSDYPYEG--REGQCRMVPSKVKVYINGSKILPEDEQIQAQMLKETGPLSSALNALFL 252

Query: 294 QTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q  +     P +C ++ L+H VL VGYG  G    RL   PYW +KNSW   +GENGY++
Sbjct: 253 QHPL-----PALCDAQSLNHAVLTVGYGKEG----RL---PYWTVKNSWSTMFGENGYFR 300

Query: 353 ICRGRNVCGVDSMVST 368
           I RG   CG++++VST
Sbjct: 301 IYRGDGTCGINTLVST 316


>gi|157864851|ref|XP_001681134.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124428|emb|CAJ02284.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|378943050|gb|AFC76266.1| cathepsin L-like protease [Leishmania major]
 gi|378943052|gb|AFC76267.1| cathepsin L-like protease [Leishmania major]
 gi|378943054|gb|AFC76268.1| cathepsin L-like protease [Leishmania major]
 gi|378943058|gb|AFC76270.1| cathepsin L-like protease [Leishmania major]
 gi|394331737|gb|AFN27091.1| cysteine protease [Leishmania major]
 gi|394331741|gb|AFN27093.1| cysteine protease [Leishmania major]
 gi|394331747|gb|AFN27096.1| cysteine protease [Leishmania major]
 gi|394331749|gb|AFN27097.1| cysteine protease [Leishmania major]
 gi|394331751|gb|AFN27098.1| cysteine protease [Leishmania major]
 gi|394331753|gb|AFN27099.1| cysteine protease [Leishmania major]
 gi|394331755|gb|AFN27100.1| cysteine protease [Leishmania major]
 gi|394331757|gb|AFN27101.1| cysteine protease [Leishmania major]
 gi|394331759|gb|AFN27102.1| cysteine protease [Leishmania major]
 gi|394331761|gb|AFN27103.1| cysteine protease [Leishmania major]
 gi|394331763|gb|AFN27104.1| cysteine protease [Leishmania major]
 gi|394331765|gb|AFN27105.1| cysteine protease [Leishmania major]
 gi|394331767|gb|AFN27106.1| cysteine protease [Leishmania major]
 gi|394331769|gb|AFN27107.1| cysteine protease [Leishmania major]
 gi|394331771|gb|AFN27108.1| cysteine protease [Leishmania major]
 gi|394331773|gb|AFN27109.1| cysteine protease [Leishmania major]
 gi|394331775|gb|AFN27110.1| cysteine protease [Leishmania major]
 gi|394331777|gb|AFN27111.1| cysteine protease [Leishmania major]
 gi|394331779|gb|AFN27112.1| cysteine protease [Leishmania major]
 gi|394331781|gb|AFN27113.1| cysteine protease [Leishmania major]
 gi|394331783|gb|AFN27114.1| cysteine protease [Leishmania major]
 gi|394331785|gb|AFN27115.1| cysteine protease [Leishmania major]
 gi|394331787|gb|AFN27116.1| cysteine protease [Leishmania major]
 gi|394331789|gb|AFN27117.1| cysteine protease [Leishmania major]
 gi|394331791|gb|AFN27118.1| cysteine protease [Leishmania major]
 gi|394331793|gb|AFN27119.1| cysteine protease [Leishmania major]
 gi|394331795|gb|AFN27120.1| cysteine protease [Leishmania major]
 gi|394331797|gb|AFN27121.1| cysteine protease [Leishmania major]
 gi|394331799|gb|AFN27122.1| cysteine protease [Leishmania major]
 gi|394331801|gb|AFN27123.1| cysteine protease [Leishmania major]
 gi|394331803|gb|AFN27124.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  217 bits (553), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|394331743|gb|AFN27094.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|297745594|emb|CBI40759.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 171/311 (54%), Gaps = 28/311 (9%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           K  K+Y S EE  HRF +F+ NL+      K   S   G+ +F+DL+  EF+R YLGL  
Sbjct: 3   KHGKSYRSFEEKLHRFEVFQDNLKHIDETNKKVSSYWLGLNEFADLSHEEFKRKYLGL-- 60

Query: 126 KLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
           K+ LPK  D        D   LP   DWR+KGAV  VK+QG+CGSCW+FST  A+EG N 
Sbjct: 61  KIELPKRRDSPEEFSYKDVADLPKSVDWRKKGAVAHVKNQGACGSCWAFSTVAAVEGINQ 120

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
           + TG L +LSEQ+L+DCD           ++GCNGGLM+ AF + +  GGL +EEDYPY 
Sbjct: 121 IVTGNLTALSEQELIDCDK--------PFNNGCNGGLMDYAFAFIISNGGLRKEEDYPYV 172

Query: 243 GTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGV 300
             + G   +  +     +++ +  V  D +Q     + N PL+VAI A     Q Y GG+
Sbjct: 173 -MEEGTCGEKKEELEVVTISGYHDVPEDNEQSFLKALANQPLSVAIEASSRGFQFYSGGI 231

Query: 301 SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---- 356
              + C   LDHGV  VGYG++       K   Y  +KNSWG  WGE GY ++ R     
Sbjct: 232 FNGH-CGTELDHGVAAVGYGTS-------KGVDYITVKNSWGSKWGEKGYIRMKRNVGKP 283

Query: 357 RNVCGVDSMVS 367
             +CG+  M S
Sbjct: 284 EGICGIYKMAS 294


>gi|378943046|gb|AFC76264.1| cathepsin L-like protease [Leishmania major]
 gi|378943056|gb|AFC76269.1| cathepsin L-like protease [Leishmania major]
 gi|394331745|gb|AFN27095.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  217 bits (552), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|401430350|ref|XP_003886559.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|356491516|emb|CBZ40966.1| unnamed protein product, partial [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 503

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 98  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 157

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 158 YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 217

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G L
Sbjct: 218 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 268

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S    + A +    ++   E  +AA L KNGP+A+A++A
Sbjct: 269 YTEDSYPYV-SGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA 327

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I  ++L+HGVLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct: 328 SSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 379

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 380 VRVVMGVNAC 389


>gi|50355617|dbj|BAD29957.1| cysteine protease [Daucus carota]
          Length = 437

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 128/337 (37%), Positives = 191/337 (56%), Gaps = 34/337 (10%)

Query: 42  ILSHHESTNNDLLGAEHH----FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL 97
           I+++ ++  N L+  +      ++ +  K  K+Y +  E + RF IFK NLR    H   
Sbjct: 27  IINYDQTHTNSLIRTDDEVMTMYNSWLVKHGKSYNALGEKETRFQIFKDNLRYIDNHNA- 85

Query: 98  DPSATH--GITQFSDLTPAEFRRTYLGLRRKLRLPK----DADQAPILPTNDLPADFDWR 151
           DP  ++  G+ +F+DLT  E+R  YLG + +   PK     +D+   +   +LP   DWR
Sbjct: 86  DPDRSYELGLNRFADLTNEEYRAKYLGTKSRESRPKLSKGPSDRYAPVEGEELPDSIDWR 145

Query: 152 EKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSC 211
           EKGAV  VKDQGSCGSCW+FS  GA+EG N + TG+L++LSEQ+LVDCD         S 
Sbjct: 146 EKGAVAAVKDQGSCGSCWAFSAIGAVEGINQITTGELITLSEQELVDCDR--------SY 197

Query: 212 DSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDE 271
           + GC GGLM+ AF + +K GG+  + DYPYTG D G   +  ++    ++ ++  V + +
Sbjct: 198 NEGCEGGLMDYAFNFIIKNGGIDSDLDYPYTGRD-GTCNQNKENAKVVTIDSYEDVPVYD 256

Query: 272 DQIAANLVKNGPLAVAINAVYM--QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRL 329
           ++       N P++VAI A  M  Q Y+ G+     C   +DHGV++VGYGS        
Sbjct: 257 EKALQKAAANQPISVAIEAGGMDFQLYVSGIFTGK-CGTAVDHGVVVVGYGSE------- 308

Query: 330 KEKPYWIIKNSWGESWGENGYYKICRG----RNVCGV 362
           +   YWI++NSWG +WGE GY K+ R       +CG+
Sbjct: 309 EGMDYWIVRNSWGAAWGEAGYLKMQRNVGKSSGLCGI 345


>gi|343472970|emb|CCD15012.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 382

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 123/314 (39%), Positives = 171/314 (54%), Gaps = 25/314 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYRDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG C S W+FS  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPPAIDWRKKGAVTPVKDQGQCDSSWAFSAIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD         + D GC GG  + AF++ + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCD---------TNDFGCGGGFSDPAFKWIVSSNKGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      C      + A + +   +  DE+ IA  L KNGP+A+A++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCDKSGKVVGAKIRDRVDLPRDENAIAEWLAKNGPVAIAVDATS 268

Query: 293 MQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
            Q+Y GGV  SC    S+ ++  VLLVGY           + PYWIIKNSW + WGE GY
Sbjct: 269 FQSYTGGVLTSC---ISKEMNSAVLLVGYDDTS-------KPPYWIIKNSWSKGWGEKGY 318

Query: 351 YKICRGRNVCGVDS 364
            +I +G N C V +
Sbjct: 319 IRIEKGTNQCLVKN 332


>gi|18141281|gb|AAL60578.1|AF454956_1 senescence-associated cysteine protease [Brassica oleracea]
          Length = 445

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 136/313 (43%), Positives = 180/313 (57%), Gaps = 35/313 (11%)

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRRTYLGLRRK 126
           +K Y    E D RF IF  NL+    H  + + S   G+T+F+DLT  EFR  YL  R K
Sbjct: 45  HKNYNGLGEKDKRFEIFMDNLKFVQEHNSVPNQSYELGLTRFADLTNEEFRAIYL--RSK 102

Query: 127 LRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
           +   +D+ ++     N    LP + DWR KGAV PVKDQGSCGSCW+FS  GA+EG N +
Sbjct: 103 MERTRDSVKSERYLHNVGDKLPDEVDWRAKGAVVPVKDQGSCGSCWAFSAIGAVEGINQI 162

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
            TG+LVSLSEQ+LVDCD         S ++GC GGLM+ AF++ +  GG+  EEDYPYT 
Sbjct: 163 KTGELVSLSEQELVDCDT--------SYNNGCGGGLMDYAFQFIISNGGIDTEEDYPYTA 214

Query: 244 TDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGV 300
           TD  + C  DK      ++  +  V  +E+ +   L  N P++VAI A     Q Y  GV
Sbjct: 215 TDD-NICNTDKKNTRVVTIDGYEDVPENENSLKKALA-NQPISVAIEAGGRGFQLYKSGV 272

Query: 301 SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV- 359
                C   LDHGV+ VGYG++       + + YWII+NSWG +WGE+GY K+   RN+ 
Sbjct: 273 FTG-TCGTALDHGVVAVGYGTS-------EGQDYWIIRNSWGSNWGESGYIKL--QRNIK 322

Query: 360 -----CGVDSMVS 367
                CGV  M S
Sbjct: 323 DSSGKCGVAMMAS 335


>gi|302763837|ref|XP_002965340.1| hypothetical protein SELMODRAFT_143126 [Selaginella moellendorffii]
 gi|302790566|ref|XP_002977050.1| hypothetical protein SELMODRAFT_232903 [Selaginella moellendorffii]
 gi|300155026|gb|EFJ21659.1| hypothetical protein SELMODRAFT_232903 [Selaginella moellendorffii]
 gi|300167573|gb|EFJ34178.1| hypothetical protein SELMODRAFT_143126 [Selaginella moellendorffii]
          Length = 300

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 125/317 (39%), Positives = 175/317 (55%), Gaps = 32/317 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRR 118
           F  +  K  K+Y+S  E   R  IF   L    +H  L + + T G+ +FSDLT AEFR 
Sbjct: 2   FEGWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRA 61

Query: 119 TYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
            Y+G   K + P+  D+ P     +  + LP   DWR++GAV P+KDQG CGSCW+FS  
Sbjct: 62  NYVG---KFKPPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAI 118

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
            ++E A+FLAT +LVSLSEQQL+DCD         + D GC GG    AF++ ++ GG+ 
Sbjct: 119 ASIESAHFLATKELVSLSEQQLIDCD---------TVDQGCQGGFPEDAFKFVVENGGVT 169

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI--NAVY 292
            EE YPYTG     +C  +K+K+   +  +  V+ D        V   P+ V I  +   
Sbjct: 170 TEEAYPYTGF--AGSCNANKNKV-VEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQN 226

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q Y  G+   + CS   DH VL++GYG+ G         PYWIIKNSWG SWGE+G+ +
Sbjct: 227 FQNYRSGILSGH-CSNSRDHAVLVIGYGTEG-------GMPYWIIKNSWGTSWGEDGFMR 278

Query: 353 ICR--GRNVCGVDSMVS 367
           I +  G  +CG++   S
Sbjct: 279 IKKEDGEGMCGMNGQSS 295


>gi|394331822|gb|AFN27130.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  217 bits (552), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 131/312 (41%), Positives = 169/312 (54%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPYAVDWRKKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
           ++E    LA  +L +LSEQQLV CD +         DSGC GGLM  AFE+ L+   G +
Sbjct: 158 SIESQWALAGHRLTALSEQQLVSCDDK---------DSGCGGGLMLQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S      A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEDSYPYVSSS-GYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y  GV  SC  I    L+HGVLLVGY   G       E PYW+IKNSWGE WGEN
Sbjct: 268 SSFMSYESGVLTSCAGI---TLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEN 317

Query: 349 GYYKICRGRNVC 360
           GY ++  G N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|302790570|ref|XP_002977052.1| hypothetical protein SELMODRAFT_268054 [Selaginella moellendorffii]
 gi|300155028|gb|EFJ21661.1| hypothetical protein SELMODRAFT_268054 [Selaginella moellendorffii]
          Length = 300

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 125/317 (39%), Positives = 175/317 (55%), Gaps = 32/317 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRR 118
           F  +  K  K+Y+S  E   R  IF   L    +H  L + + T G+ +FSDLT AEFR 
Sbjct: 2   FEGWAAKHGKSYSSDWEKARRLMIFSDTLAYIEKHNALPNTTFTLGLNKFSDLTNAEFRA 61

Query: 119 TYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
            Y+G   K + P+  D+ P     +  + LP   DWR++GAV P+KDQG CGSCW+FS  
Sbjct: 62  NYVG---KFKPPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAI 118

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
            ++E A+FLAT +LVSLSEQQL+DCD         + D GC GG    AF++ ++ GG+ 
Sbjct: 119 ASIESAHFLATKELVSLSEQQLIDCD---------TVDQGCQGGFPEDAFKFVVENGGVT 169

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI--NAVY 292
            EE YPYTG     +C  +K+K+   +  +  V+ D        V   P+ V I  +   
Sbjct: 170 TEEAYPYTGF--AGSCNANKNKV-VEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQN 226

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q Y  G+   + CS   DH VL++GYG+ G         PYWIIKNSWG SWGE+G+ +
Sbjct: 227 FQNYRSGILSGH-CSNSRDHAVLVIGYGTEG-------GMPYWIIKNSWGTSWGEDGFMR 278

Query: 353 ICR--GRNVCGVDSMVS 367
           I +  G  +CG++   S
Sbjct: 279 IKKKDGEGMCGMNGQSS 295


>gi|229596051|ref|XP_001013456.3| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|225565626|gb|EAR93211.3| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 315

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/324 (40%), Positives = 177/324 (54%), Gaps = 38/324 (11%)

Query: 44  SHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH 103
           +HH +  +  + A   +S FK K+NK YA  +   +R  IF  NL+    + K      +
Sbjct: 26  THHNTQEDQNIQA--LWSAFKTKYNKKYADPDFERYRIEIFTENLKVVESNTK-----NY 78

Query: 104 GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQG 163
           GITQF D+T  EF++TYL L+ K  L      +P    ND   + DW  KGAV PVKDQG
Sbjct: 79  GITQFMDITREEFKQTYLTLKMKNGLKA----SPFAKFNDAGVEIDWTTKGAVTPVKDQG 134

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCWSFSTTGA+EGA FL+T KL SLSEQ LVDC  +         + GCNGGLM++A
Sbjct: 135 QCGSCWSFSTTGAVEGALFLSTKKLTSLSEQYLVDCSKD--------GNEGCNGGLMDTA 186

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGP 283
           F++ +   G+  E  YPY   D    CK        S    S   + +     N ++  P
Sbjct: 187 FDF-ISQHGIPTEAAYPYKAVD--GTCKMTSGPYKIS----SHTDIQDCNDLLNKIQKQP 239

Query: 284 LAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           +A+A++A   Q Y   +     C   LDHGVLLVGY ++G          YW +KNSWG 
Sbjct: 240 IAIAVDANNFQYYQKDIFSD--CGTELDHGVLLVGYSASG---------KYWKVKNSWGP 288

Query: 344 SWGENGYYKICRGRNVCGVDSMVS 367
           +WGE+G+ ++  G N CG+ +M S
Sbjct: 289 NWGESGFIRLAAG-NTCGLCNMAS 311


>gi|461905|sp|Q05094.1|CYSP2_LEIPI RecName: Full=Cysteine proteinase 2; AltName: Full=Amastigote
           cysteine proteinase A-2; Flags: Precursor
 gi|159298|gb|AAA29229.1| cysteine proteinase [Leishmania pifanoi]
          Length = 444

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 169/311 (54%), Gaps = 28/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G L
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK----IAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
             E+ YPY  +  G+  +   S     + A +    ++   E  +AA L KNGP+A+A++
Sbjct: 209 HTEDSYPYV-SGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALD 267

Query: 290 AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           A    +Y  GV    I  ++L+HGVLLVGY   G       E PYW+IKNSWG  WGE G
Sbjct: 268 ASSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQG 319

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 320 YVRVVMGVNAC 330


>gi|577617|gb|AAC37213.1| cysteine proteinase [Trypanosoma cruzi]
          Length = 467

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 127/314 (40%), Positives = 168/314 (53%), Gaps = 21/314 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ANL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYGSAAEEAFRLSVFRANLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWRE+GAV  VK+QG CGSCW+F+  G +
Sbjct: 97  RYHNGAAHFAAAEERARVPVDVEVVGAPAAKDWREEGAVTAVKNQGICGSCWAFAAIGNI 156

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           EG  FLA   L  LSEQ LV CD+          +SGC GGL + AFE+ ++   G +  
Sbjct: 157 EGQWFLAGNPLTRLSEQMLVSCDNT---------NSGCGGGLSSKAFEWIVQENNGAVYT 207

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +       CK     + A++     +  DE QIAA+    GPL+VA++A    
Sbjct: 208 EDSYPYHSCIGIKLPCKDSDRTVGATITGHVELPQDEAQIAASGAVKGPLSVAVDASSWF 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y GGV    + S+RL H VLLVGY  +          PYWIIKNSW   WGE GY +I 
Sbjct: 268 FYTGGVLTNCV-SKRLSHAVLLVGYNDSAAV-------PYWIIKNSWTTHWGEGGYIRIA 319

Query: 355 RGRNVCGVDSMVST 368
           +G N C V   VS+
Sbjct: 320 KGSNQCLVKEEVSS 333


>gi|394331739|gb|AFN27092.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHCRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|255646767|gb|ACU23856.1| unknown [Glycine max]
          Length = 350

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 125/315 (39%), Positives = 175/315 (55%), Gaps = 25/315 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  +  K Y + EE   RF IFK NL+      K+  +   G+++F+DL+  EF   
Sbjct: 48  FESWMSRHGKIYENIEEKLLRFEIFKDNLKHIDERNKVVSNYWLGLSEFADLSHREFNNK 107

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           YLGL+      +++ +       +LP   DWR+KGAV PVK+QGSCGSCW+FST  A+EG
Sbjct: 108 YLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEG 167

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
            N + TG L SLSEQ+L+DCD         + ++GCNGGLM+ AF + ++ GGL +EEDY
Sbjct: 168 INQIVTGNLTSLSEQELIDCDR--------TYNNGCNGGLMDYAFSFIVENGGLHKEEDY 219

Query: 240 PYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           PY   +   AC+  K +    +++ +  V  + +Q     + N PL+VAI A     Q Y
Sbjct: 220 PYIMEE--GACEMTKEETQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFY 277

Query: 297 IGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
            GGV   + C   LDHGV  VGYG+A       K   Y  +KNSWG  WGE GY ++ R 
Sbjct: 278 SGGVFDGH-CGSDLDHGVAAVGYGTA-------KGVDYITVKNSWGSKWGEKGYIRMRRN 329

Query: 357 ----RNVCGVDSMVS 367
                 +CG+  M S
Sbjct: 330 IGKPEGICGIYKMAS 344


>gi|302763109|ref|XP_002964976.1| hypothetical protein SELMODRAFT_83176 [Selaginella moellendorffii]
 gi|302763113|ref|XP_002964978.1| hypothetical protein SELMODRAFT_83554 [Selaginella moellendorffii]
 gi|300167209|gb|EFJ33814.1| hypothetical protein SELMODRAFT_83176 [Selaginella moellendorffii]
 gi|300167211|gb|EFJ33816.1| hypothetical protein SELMODRAFT_83554 [Selaginella moellendorffii]
          Length = 300

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 124/317 (39%), Positives = 177/317 (55%), Gaps = 32/317 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHGITQFSDLTPAEFRR 118
           F  +  K +K+Y+S  E   R  +F   L    +H  + + + T G+ +FSDLT AEFR 
Sbjct: 2   FEDWAAKHDKSYSSDWEKARRLMVFSDTLAYIEKHNAQPNTTFTLGLNKFSDLTNAEFRA 61

Query: 119 TYLGLRRKLRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
            Y+G   K + P+  D+ P     +  + LP   DWR++GAV P+KDQG CGSCW+FS  
Sbjct: 62  NYVG---KFKPPRYQDRRPAKDVDVDVSSLPTSLDWRQEGAVTPIKDQGQCGSCWAFSAI 118

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
            ++E A+FLAT +LVSLSEQQL+DCD         + D GC GG  + AF++ ++ GG+ 
Sbjct: 119 ASIESAHFLATKELVSLSEQQLIDCD---------TVDQGCQGGFPDDAFKFVVENGGVT 169

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI--NAVY 292
            EE YPYTG     +C  +K+K+   +  +  V+ D        V   P+ V I  +   
Sbjct: 170 TEEAYPYTGF--AGSCNTNKNKV-VEITGYKDVTKDSADALMKAVSKTPVTVGICGSDQN 226

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q Y  G+     C+ R DH VL++GYG+ G         PYWIIKNSWG SWGE+G+ K
Sbjct: 227 FQNYRSGILSGQCCNSR-DHAVLVIGYGTEG-------GMPYWIIKNSWGTSWGEDGFMK 278

Query: 353 ICR--GRNVCGVDSMVS 367
           I +  G  +CG++   S
Sbjct: 279 IKKKDGEGMCGMNGQSS 295


>gi|62320725|dbj|BAD95392.1| cysteine proteinase RD21A [Arabidopsis thaliana]
          Length = 433

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 195/360 (54%), Gaps = 47/360 (13%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGD---EILSHHESTNNDLLGAEHHFSLF 63
           +LFL  + V SAV    +  D    +   T GG    E++S +E+             L 
Sbjct: 10  ILFLAMVAVSSAVDMSIISYDEKHGVS--TTGGRSEAEVMSIYEAW------------LV 55

Query: 64  KKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL 123
           K    ++  S  E D RF IFK NLR    H + + S   G+T+F+DLT  E+R  YLG 
Sbjct: 56  KHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGA 115

Query: 124 R------RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           +      R+  L  +A        ++LP   DWR+KGAV  VKDQG CGSCW+FST GA+
Sbjct: 116 KMEKKGERRTSLRYEARVG-----DELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAV 170

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG N + TG L++LSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  ++
Sbjct: 171 EGINQIVTGDLITLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTDK 222

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQT 295
           DYPY G D G   +  K+    ++ ++  V    ++     V + P+++AI A     Q 
Sbjct: 223 DYPYKGVD-GTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQL 281

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           Y  G+     C  +LDHGV+ VGYG+          K YWI++NSWG+SWGE+GY ++ R
Sbjct: 282 YDSGIF-DGSCGTQLDHGVVAVGYGTE-------NGKDYWIVRNSWGKSWGESGYLRMAR 333


>gi|167521499|ref|XP_001745088.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163776702|gb|EDQ90321.1| predicted protein [Monosiga brevicollis MX1]
          Length = 294

 Score =  217 bits (552), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 134/308 (43%), Positives = 177/308 (57%), Gaps = 34/308 (11%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANL----RRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           FK  ++K+Y S+     R   F+ANL    +  A H +   S T G+ +F+DLT  EF  
Sbjct: 1   FKSDYSKSYESEAVEAKRLAAFEANLEFINKHNAEHAQGLHSYTVGVNEFADLTIDEFMA 60

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            Y+  +    +P +    P    + +    DWR KGAV P+K+QG CGSCWSFSTTG+ E
Sbjct: 61  LYVPSKFNRTMPYNTVYLPATSEDSV----DWRTKGAVTPIKNQGQCGSCWSFSTTGSTE 116

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSC-DSGCNGGLMNSAFEYTLKAGGLMREE 237
           GA+ +ATG LVSLSEQQLVDC         GS  + GCNGGLM+ AF+Y +   GL  EE
Sbjct: 117 GAHAIATGNLVSLSEQQLVDCS--------GSFGNQGCNGGLMDDAFKYIISNKGLDTEE 168

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVY--MQ 294
           DYPYT  D G   K  ++K AA+++++S V   +EDQ+AA + K GP++VAI A     Q
Sbjct: 169 DYPYTAQD-GTCNKEKEAKHAATISSYSDVPKNNEDQLAAAVAK-GPVSVAIEADQSGFQ 226

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y  GV     C   LDHGVL+VGY              YWI+KNSWG +WG  GY  + 
Sbjct: 227 LYKSGV-FDGNCGTNLDHGVLVVGY-----------TDDYWIVKNSWGTTWGVEGYINMK 274

Query: 355 RGRNVCGV 362
           RG +  G+
Sbjct: 275 RGVSASGI 282


>gi|147790682|emb|CAN61026.1| hypothetical protein VITISV_001146 [Vitis vinifera]
          Length = 469

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/312 (40%), Positives = 174/312 (55%), Gaps = 25/312 (8%)

Query: 49  TNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQF 108
           T+ D++     +  +  K  K+Y +  E + RF IFK NLR    H   + +   G+ +F
Sbjct: 45  TDEDVMAV---YEAWLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAENRTYKVGLNRF 101

Query: 109 SDLTPAEFRRTYLGLR---RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSC 165
           +DLT  E+R  YLG R   ++    K +D+      + LP   DWR+KGAV  VKDQGSC
Sbjct: 102 ADLTNEEYRSMYLGTRTAAKRRSSNKISDRYAFRVGDSLPESVDWRKKGAVVEVKDQGSC 161

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           GSCW+FST  A+EG N + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE
Sbjct: 162 GSCWAFSTIAAVEGINKIVTGGLISLSEQELVDCDT--------SYNEGCNGGLMDYAFE 213

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLA 285
           + +  GG+  EEDYPY  +D G   ++ K+    ++  +  V  ++++     V N P++
Sbjct: 214 FIINNGGIDSEEDYPYKASD-GRCDQYRKNAXVVTIDGYEDVPENDEKSLEKAVANQPVS 272

Query: 286 VAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           VAI A     Q Y  G+     C   LDHGV  VGYG+            YWI+KNSWG 
Sbjct: 273 VAIEAGGREFQLYQSGIFTGR-CGTALDHGVTAVGYGTENGV-------DYWIVKNSWGA 324

Query: 344 SWGENGYYKICR 355
           SWGE GY ++ R
Sbjct: 325 SWGEEGYIRMER 336


>gi|344271616|ref|XP_003407633.1| PREDICTED: cathepsin L1-like [Loxodonta africana]
          Length = 334

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 170/317 (53%), Gaps = 22/317 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPA 114
            ++ ++  + K YA  EE D R  +++ N++   RH +      HG T     F D+T  
Sbjct: 28  QWNQWRSTYKKPYAVNEE-DWRRAVWEKNVKMIERHNQEYSQGKHGFTMAMNAFGDMTNE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EFR+   G + +          P+     +P   DW +KG V PVK+QG CGSCW+FS T
Sbjct: 87  EFRQVMNGFQNQKHKKGKLFYEPVF--GHIPTSVDWTQKGYVTPVKNQGQCGSCWAFSAT 144

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALEG  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF+Y    GGL 
Sbjct: 145 GALEGQMFRKTGKLVSLSEQNLVDCSRR-------EGNEGCNGGLMDNAFQYVQDNGGLD 197

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY-- 292
            EE YPY  TD  H C +     AA+   F  +   E  +   +   GP++VAI+A +  
Sbjct: 198 SEESYPYLATDT-HTCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHES 256

Query: 293 MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Q Y  G+   P   S+ LDHGVLLVGYG  G      +   +WI+KNSWG SWG NGY 
Sbjct: 257 FQFYKSGIYYEPGCSSKDLDHGVLLVGYGFEGKDS---ENNKFWIVKNSWGTSWGTNGYV 313

Query: 352 KICRGRNV-CGVDSMVS 367
           K+ + +N  CG+ +  S
Sbjct: 314 KMAKDQNNHCGIATAAS 330


>gi|14517542|gb|AAK62661.1| F2G19.31/F2G19.31 [Arabidopsis thaliana]
 gi|19548039|gb|AAL87383.1| F2G19.31/F2G19.31 [Arabidopsis thaliana]
          Length = 462

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 195/360 (54%), Gaps = 47/360 (13%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGD---EILSHHESTNNDLLGAEHHFSLF 63
           +LFL  + V SAV    +  D    +   T GG    E++S +E+             L 
Sbjct: 10  ILFLAMVTVSSAVDMSIISYDEKHGVS--TTGGRSEAEVMSIYEAW------------LV 55

Query: 64  KKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL 123
           K    ++  S  E D RF IFK NLR    H + + S   G+T+F+DLT  E+R  YLG 
Sbjct: 56  KHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGA 115

Query: 124 R------RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           +      R+  L  +A        ++LP   DWR+KGAV  VKDQG CGSCW+FST GA+
Sbjct: 116 KMEKKGERRTSLRYEARVG-----DELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAV 170

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG N + TG L++LSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  ++
Sbjct: 171 EGINQIVTGDLITLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTDK 222

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQT 295
           DYPY G D G   +  K+    ++ ++  V    ++     V + P+++AI A     Q 
Sbjct: 223 DYPYKGVD-GTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQL 281

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           Y  G+     C  +LDHGV+ VGYG+          K YWI++NSWG+SWGE+GY ++ R
Sbjct: 282 YDSGIF-DGSCGTQLDHGVVAVGYGTE-------NGKDYWIVRNSWGKSWGESGYLRMAR 333


>gi|410045434|ref|XP_003313198.2| PREDICTED: LOW QUALITY PROTEIN: cathepsin F [Pan troglodytes]
          Length = 548

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/313 (44%), Positives = 179/313 (57%), Gaps = 25/313 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R ++F  N+ RA + Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 251 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRGTAQYGVTKFSDLTEEEFRT 310

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL    +        QA  +   DL P ++DWR KGAV  VKDQG CGSCW+FS TG +
Sbjct: 311 IYLNPLLRKEPGNKMKQAKSV--GDLAPPEWDWRSKGAVTKVKDQGMCGSCWAFSVTGNV 368

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL  G L+SLSEQ+L+DCD           D  C GGL ++A+      GGL  E+
Sbjct: 369 EGQWFLNQGTLLSLSEQELLDCDK---------MDKACMGGLPSNAYSAIKNLGGLETED 419

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           DY Y G     +C F   K    + +  V+S +E ++AA L K GP++VAINA  MQ Y 
Sbjct: 420 DYSYQG--HMQSCNFSAEKAKVYINDSVVLSQNEQKLAAWLAKRGPISVAINAFGMQFYR 477

Query: 298 GGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            G+S P   +CS  L DH VLLVGYG+         + P+W IKNSWG  WGE GYY + 
Sbjct: 478 HGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKGYYYLH 530

Query: 355 RGRNVCGVDSMVS 367
            G   CGV++M S
Sbjct: 531 CGSEACGVNTMAS 543


>gi|320169658|gb|EFW46557.1| cathepsin L2 [Capsaspora owczarzaki ATCC 30864]
          Length = 324

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/315 (40%), Positives = 173/315 (54%), Gaps = 23/315 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +K     +YA+  E   R  I++ANL    +H     S    + +F+DLT  EF   
Sbjct: 22  FDSWKATHGVSYATVGEETARRGIYRANLDFIEKHNSEGHSYKLAVNKFADLTYPEFAAK 81

Query: 120 YLGLR-RKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           YLGLR       K    +  LP    LP   DWR  G V P+KDQG CGSCWSFSTTG++
Sbjct: 82  YLGLRFDATNATKSFAASTYLPRMVSLPDSVDWRTAGIVTPIKDQGQCGSCWSFSTTGSV 141

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG +   TG+LVSLSEQ LVDC            ++GCNGGLM+ AF+Y +   G+  E 
Sbjct: 142 EGQHARKTGQLVSLSEQNLVDC-------SSAQGNAGCNGGLMDQAFQYIISNNGIDTES 194

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVY--MQ 294
            YPYT  D    C+F+ + + A+VA++  + S  E  +   +   GP++VAI+A     Q
Sbjct: 195 SYPYTAQD--GTCQFNSANVGATVASYQDIASGSESDLQNAVATVGPISVAIDASQPSFQ 252

Query: 295 TYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y  GV + P   S +LDHGVL VGYG++G          YW++KNSWG SWG++GY  +
Sbjct: 253 FYSSGVYNEPACSSSQLDHGVLAVGYGTSG-------SSDYWLVKNSWGTSWGQSGYIWM 305

Query: 354 CRG-RNVCGVDSMVS 367
            R   N CG+ +  S
Sbjct: 306 TRNSNNQCGIATAAS 320


>gi|18401614|ref|NP_564497.1| cysteine proteinase RD21a [Arabidopsis thaliana]
 gi|1172873|sp|P43297.1|RD21A_ARATH RecName: Full=Cysteine proteinase RD21a; Short=RD21; Flags:
           Precursor
 gi|12321010|gb|AAG50628.1|AC083835_13 cysteine protease, putative [Arabidopsis thaliana]
 gi|435619|dbj|BAA02374.1| thiol protease [Arabidopsis thaliana]
 gi|18175926|gb|AAL59952.1| putative cysteine proteinase RD21A [Arabidopsis thaliana]
 gi|22136972|gb|AAM91715.1| putative cysteine proteinase RD21A [Arabidopsis thaliana]
 gi|332194014|gb|AEE32135.1| cysteine proteinase RD21a [Arabidopsis thaliana]
          Length = 462

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/360 (38%), Positives = 195/360 (54%), Gaps = 47/360 (13%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGD---EILSHHESTNNDLLGAEHHFSLF 63
           +LFL  + V SAV    +  D    +   T GG    E++S +E+             L 
Sbjct: 10  ILFLAMVAVSSAVDMSIISYDEKHGVS--TTGGRSEAEVMSIYEAW------------LV 55

Query: 64  KKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL 123
           K    ++  S  E D RF IFK NLR    H + + S   G+T+F+DLT  E+R  YLG 
Sbjct: 56  KHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGA 115

Query: 124 R------RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           +      R+  L  +A        ++LP   DWR+KGAV  VKDQG CGSCW+FST GA+
Sbjct: 116 KMEKKGERRTSLRYEARVG-----DELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAV 170

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG N + TG L++LSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  ++
Sbjct: 171 EGINQIVTGDLITLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTDK 222

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQT 295
           DYPY G D G   +  K+    ++ ++  V    ++     V + P+++AI A     Q 
Sbjct: 223 DYPYKGVD-GTCDQIRKNAKVVTIDSYEDVPTYSEESLKKAVAHQPISIAIEAGGRAFQL 281

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           Y  G+     C  +LDHGV+ VGYG+          K YWI++NSWG+SWGE+GY ++ R
Sbjct: 282 YDSGIF-DGSCGTQLDHGVVAVGYGTE-------NGKDYWIVRNSWGKSWGESGYLRMAR 333


>gi|182375363|gb|ACB87490.1| mucunain [Mucuna pruriens]
          Length = 422

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/306 (41%), Positives = 175/306 (57%), Gaps = 27/306 (8%)

Query: 60  FSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
            SL+++   K  KAY +  E D RF IFK NLR    H   + +   G+ +F+DLT  E+
Sbjct: 1   MSLYEQWLVKHGKAYNALGEKDKRFDIFKDNLRFIDDHNADNRTYKLGLNRFADLTNEEY 60

Query: 117 RRTYLGLR-----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           R  YLG R     R ++    +++      ++LP   DWR + AV PVKDQG+CGSCW+F
Sbjct: 61  RARYLGTRIDPNRRFVKTKTQSNRYAPRVGDNLPESVDWRNESAVLPVKDQGNCGSCWAF 120

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           ST GA+EG N + TG L+SLSEQ+LVDCD         S + GCNGGLM+ A+E+ +  G
Sbjct: 121 STIGAVEGINKIVTGDLISLSEQELVDCDT--------SYNQGCNGGLMDYAYEFIINNG 172

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN-- 289
           G+  EEDYPY   D G   ++ K+    ++ ++  V  +++      V N P++VAI   
Sbjct: 173 GIDSEEDYPYRAVD-GTCDQYRKNAKVVTIDSYEDVPANDELALKKAVANQPVSVAIEGG 231

Query: 290 AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
               Q Y+ GV     C   LDHGV+ VGYGS       +K   YWI++NSWG SWGE G
Sbjct: 232 GREFQLYVSGVFTGR-CGTALDHGVVAVGYGS-------VKGHDYWIVRNSWGASWGEEG 283

Query: 350 YYKICR 355
           Y ++ R
Sbjct: 284 YVRLER 289


>gi|109390302|gb|ABG33750.1| cysteine protease [Hevea brasiliensis]
          Length = 457

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/306 (41%), Positives = 173/306 (56%), Gaps = 26/306 (8%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR- 124
           K  KAY S  E + RF +FK NLR    H   + +   G+ +F+DLT  E+R  YLG   
Sbjct: 48  KHGKAYNSLGEKERRFEVFKDNLRFIDEHNSENRTYRVGLNRFADLTNEEYRSMYLGALS 107

Query: 125 --RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
             R+ +L K +D+      + LP   DWR++GAV  VKDQGSCGSCW+FS   A+EG N 
Sbjct: 108 GIRRNKLRKISDRYTPRVGDSLPDSVDWRKEGAVVGVKDQGSCGSCWAFSAVAAVEGINK 167

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
           + TG L+SLSEQ+LVDCD+        S + GCNGGLM+  FE+ +  GG+  EEDYPY 
Sbjct: 168 IVTGDLISLSEQELVDCDN--------SYNEGCNGGLMDYGFEFIINNGGIDSEEDYPYL 219

Query: 243 GTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGV 300
             D G    + K+    S+ ++  V ++ +      V N P++VAI A     Q Y  GV
Sbjct: 220 ARD-GRCDTYRKNARVVSIDSYEDVPVNNEAALQKAVANQPVSVAIEAGGRDFQLYSSGV 278

Query: 301 SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---- 356
                C   LDHGV+ VGYG+          + YWI++NSWG+SWGE+GY ++ R     
Sbjct: 279 FSGR-CGTALDHGVVAVGYGTE-------NGQDYWIVRNSWGKSWGESGYLRMARNIRKP 330

Query: 357 RNVCGV 362
             +CG+
Sbjct: 331 TGICGI 336


>gi|255538210|ref|XP_002510170.1| cysteine protease, putative [Ricinus communis]
 gi|223550871|gb|EEF52357.1| cysteine protease, putative [Ricinus communis]
          Length = 469

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/285 (42%), Positives = 167/285 (58%), Gaps = 22/285 (7%)

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR---RKLRLPKD 132
           E + RF +FK NLR    H   + S   G+ +F+DLT  E+R  YLG R   ++ RL + 
Sbjct: 70  EKERRFQVFKDNLRFIDEHNSENRSYKVGLNRFADLTNEEYRSMYLGARSGAKRNRLSRS 129

Query: 133 ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLS 192
           +++      + LP   DWR++GAV  VKDQGSCGSCW+FST  A+EG N + TG L+SLS
Sbjct: 130 SNRYLPRVGDSLPDSVDWRKEGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLS 189

Query: 193 EQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 252
           EQ+LVDCD         S + GCNGGLM+ AF++ +  GG+  EEDYPY   D G    +
Sbjct: 190 EQELVDCDR--------SYNEGCNGGLMDYAFQFIINNGGIDSEEDYPYLARD-GTCDTY 240

Query: 253 DKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRL 310
            K+    ++ N+  V +++++     V N P++VAI A     Q Y  G+     C   L
Sbjct: 241 RKNAKVVTIDNYEDVPVNDEKALQKAVANQPVSVAIEAGGREFQFYQSGIFTGR-CGTAL 299

Query: 311 DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           DHGV  VGYG+          K YWI++NSWG+SWGE+GY ++ R
Sbjct: 300 DHGVAAVGYGTE-------NGKDYWIVRNSWGKSWGESGYIRMER 337


>gi|157864853|ref|XP_001681135.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|157864857|ref|XP_001681137.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124429|emb|CAJ02285.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124431|emb|CAJ02287.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 443

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|225458701|ref|XP_002284973.1| PREDICTED: cysteine proteinase RD21a-like [Vitis vinifera]
          Length = 467

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/312 (40%), Positives = 174/312 (55%), Gaps = 25/312 (8%)

Query: 49  TNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQF 108
           T+ D++     +  +  K  K+Y +  E + RF IFK NLR    H   + +   G+ +F
Sbjct: 43  TDEDVMAV---YEAWLAKHGKSYNALGEKERRFQIFKDNLRFIDEHNAENRTYKVGLNRF 99

Query: 109 SDLTPAEFRRTYLGLR---RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSC 165
           +DLT  E+R  YLG R   ++    K +D+      + LP   DWR+KGAV  VKDQGSC
Sbjct: 100 ADLTNEEYRSMYLGTRTAAKRRSSNKISDRYAFRVGDSLPESVDWRKKGAVVEVKDQGSC 159

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           GSCW+FST  A+EG N + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE
Sbjct: 160 GSCWAFSTIAAVEGINKIVTGGLISLSEQELVDCDT--------SYNEGCNGGLMDYAFE 211

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLA 285
           + +  GG+  EEDYPY  +D G   ++ K+    ++  +  V  ++++     V N P++
Sbjct: 212 FIINNGGIDSEEDYPYKASD-GRCDQYRKNAKVVTIDGYEDVPENDEKSLEKAVANQPVS 270

Query: 286 VAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           VAI A     Q Y  G+     C   LDHGV  VGYG+            YWI+KNSWG 
Sbjct: 271 VAIEAGGREFQLYQSGIFTGR-CGTALDHGVTAVGYGTENGV-------DYWIVKNSWGA 322

Query: 344 SWGENGYYKICR 355
           SWGE GY ++ R
Sbjct: 323 SWGEEGYIRMER 334


>gi|226495425|ref|NP_001148706.1| cysteine protease 1 precursor [Zea mays]
 gi|195621544|gb|ACG32602.1| cysteine protease 1 precursor [Zea mays]
          Length = 463

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 176/321 (54%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  +   A   ++ +     + Y +  E + R+ +F+ NLR    H     + 
Sbjct: 26  IVSYGERSXEE---ARRMYAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAG 82

Query: 102 TH----GITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLG R R  R  K   +       DLP   DWR KGAV
Sbjct: 83  VHSFRLGLNRFADLTNDEYRATYLGARTRPQRERKLGARYHAADNEDLPESVDWRAKGAV 142

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             VKDQGSCGSCW+FST  A+EG N + TG L+SLSEQ+LVDCD         S + GCN
Sbjct: 143 AEVKDQGSCGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNQGCN 194

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AFE+ +  GG+  E+DYPY GTD G      K+    ++ ++  V  ++++   
Sbjct: 195 GGLMDYAFEFIINNGGIDTEKDYPYKGTD-GRCDVNRKNAKVVTIDSYEDVPANDEKSLQ 253

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K Y
Sbjct: 254 KAVANQPVSVAIEAAGTAFQLYSSGIFTG-SCGTALDHGVTAVGYGTE-------NGKDY 305

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI+KNSWG SWGE+GY ++ R
Sbjct: 306 WIVKNSWGSSWGESGYVRMER 326


>gi|401430288|ref|XP_003886537.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491333|emb|CBZ40988.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 533

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 128 FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 187

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 188 YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 247

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G L
Sbjct: 248 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 298

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S    + A +    ++   E  +AA L KNGP+A+A++A
Sbjct: 299 HTEDSYPYV-SGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA 357

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I  ++L+HGVLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct: 358 SSFMSYKSGVLTACI-GKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 409

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 410 VRVVMGVNAC 419


>gi|5081735|gb|AAD39513.1|AF147207_1 cathepsin L-like protease precursor [Artemia franciscana]
          Length = 338

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/328 (41%), Positives = 177/328 (53%), Gaps = 30/328 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKLDPSATHGITQ 107
           +LL  E H  LFK    K Y SQ E   R  I+  N  + A+H    +K + S    + +
Sbjct: 25  NLLADEWH--LFKATHKKEYPSQLEEKFRMKIYLENKHKVAKHNILYEKGEKSYQVAMNK 82

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL--PTN-DLPADFDWREKGAVGPVKDQGS 164
           F DL   EFR    G + K +    A+       P N ++P   DWR KGA+ PVKDQG 
Sbjct: 83  FGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWRVKGAITPVKDQGQ 142

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCW+FS+TGALEG  F  TGKL+SLSEQ L+DC  +   E       GCNGGLM+ AF
Sbjct: 143 CGSCWAFSSTGALEGQTFRKTGKLISLSEQNLIDCSGKYGNE-------GCNGGLMDQAF 195

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGP 283
           +Y     G+  E  YPY   D  + C+++     A    F  + S +ED++ A +   GP
Sbjct: 196 QYIKDNKGIDTENTYPYEAED--NVCRYNPRNRGAIDRGFVHIPSGEEDKLKAAVATVGP 253

Query: 284 LAVAINAVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           ++VAI+A +   Q Y  GV     C S  LDHGVL+VGYGS          K YW++KNS
Sbjct: 254 VSVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSDN-------GKDYWLVKNS 306

Query: 341 WGESWGENGYYKICRGR-NVCGVDSMVS 367
           W E WG+ GY KI R R N CG+ +  S
Sbjct: 307 WSEHWGDEGYIKIARNRKNHCGIATAAS 334


>gi|302812789|ref|XP_002988081.1| hypothetical protein SELMODRAFT_183539 [Selaginella moellendorffii]
 gi|300144187|gb|EFJ10873.1| hypothetical protein SELMODRAFT_183539 [Selaginella moellendorffii]
          Length = 425

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/334 (38%), Positives = 185/334 (55%), Gaps = 34/334 (10%)

Query: 48  STNNDLLGAEHHFSLFKKKFNKAYASQEE-HDHRFTIFKANLRRAARHQKLDPSATH-GI 105
           S+++DL G    ++ +  KF K  AS     DHRF  FK N R    H +    +   G+
Sbjct: 4   SSDSDLSG---EYASWCAKFGKECASSNSLGDHRFETFKENFRYIEEHNRAGKHSYRLGL 60

Query: 106 TQFSDLTPAEFRRTYLGLRRKL------RLPKDADQAPILPTNDLPADFDWREKGAVGPV 159
            QFSDLT  EFR+ +LGLR  L      ++P+D+D        DLPA  DWR+ GAV   
Sbjct: 61  NQFSDLTSEEFRQRFLGLRPDLIDSPVLKMPRDSDIEEGFQNVDLPASVDWRQHGAVTAP 120

Query: 160 KDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           KDQGSCG CW+F+TTGA+EG N + TG+LVSLSEQ+L+DCD +         D GC+GGL
Sbjct: 121 KDQGSCGGCWAFATTGAIEGINQIVTGQLVSLSEQELIDCDKK--------ADKGCDGGL 172

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV 279
           M +A+++ ++ GGL  E DYPY  ++     K   S++ A +  +  +   ++Q     V
Sbjct: 173 MENAYQFIVENGGLDTETDYPYHASESHCNMKKLNSRVVA-IDGYKAIPEGDEQALLLAV 231

Query: 280 KNGPLAVAINAVY--MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWII 337
              P++VAI       Q Y  GV   + C   ++HGVL+VGYG+            YWI+
Sbjct: 232 AKQPVSVAIEGASKDFQHYASGVFTGH-CGEEINHGVLIVGYGTE-------DGLDYWIV 283

Query: 338 KNSWGESWGENGYYKICRGR----NVCGVDSMVS 367
           KNSW  +WG+ G+ K+ R       +C ++++ S
Sbjct: 284 KNSWAATWGDGGFVKMQRNTGKRGGLCSINTLAS 317


>gi|537437|gb|AAC35211.1| cysteine proteinase [Hemerocallis hybrid cultivar]
          Length = 359

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/324 (40%), Positives = 177/324 (54%), Gaps = 31/324 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQE--EHDHRFTIFKANLRRAAR-HQKLDPSATHGITQF 108
           DL   E  +SL++K       S++  + D RF +FK N++     +QK D +    + +F
Sbjct: 30  DLASEESLWSLYEKWRAHHAVSRDLDDTDKRFNVFKENVKFIHEFNQKKDATYKLALNKF 89

Query: 109 SDLTPAEFRRTYLGLR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGS 164
            D+T  EFR TY G +      LR  KDA +      +DLP   DWREKGAV  VKDQG 
Sbjct: 90  GDMTNQEFRSTYAGSKIDHHMTLRGVKDAGEFSYEKFHDLPTSVDWREKGAVTGVKDQGQ 149

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCW+FST  A+EG N + T +LVSLSEQQLVDCD +         +SGCNGGLM+ AF
Sbjct: 150 CGSCWAFSTVVAVEGINQIKTNELVSLSEQQLVDCDTK---------NSGCNGGLMDYAF 200

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 284
           ++    GGL  E+ YPY    +  +C  + +    ++  +  V  + +      V N P+
Sbjct: 201 DFIKNNGGLSSEDSYPYLAEQK--SCGSEANSAVVTIDGYQDVPRNNEAALMKAVANQPV 258

Query: 285 AVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           +VAI A     Q Y  GV   + C   LDHGV  VGYG      +    K YWI+KNSWG
Sbjct: 259 SVAIEASGYAFQFYSQGVFSGH-CGTELDHGVAAVGYG------VDDDGKKYWIVKNSWG 311

Query: 343 ESWGENGYYKICRG----RNVCGV 362
           E WGE+GY ++ RG    R  CG+
Sbjct: 312 EGWGESGYIRMERGIKDKRGKCGI 335


>gi|394331805|gb|AFN27125.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKACADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 STEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|30685308|ref|NP_566634.2| putative cysteine proteinase [Arabidopsis thaliana]
 gi|30315949|sp|Q9LT77.1|CPR1_ARATH RecName: Full=Probable cysteine proteinase At3g19400; Flags:
           Precursor
 gi|11994462|dbj|BAB02464.1| cysteine proteinase [Arabidopsis thaliana]
 gi|332642715|gb|AEE76236.1| putative cysteine proteinase [Arabidopsis thaliana]
          Length = 362

 Score =  216 bits (550), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 178/311 (57%), Gaps = 30/311 (9%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
           K Y    E + RF IFK NL+    H  + D +   G+T+F+DLT  EFR  YL  R+K+
Sbjct: 53  KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYL--RKKM 110

Query: 128 RLPKDADQAP--ILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
              KD+ +    +    D LP + DWR  GAV  VKDQG+CGSCW+FS  GA+EG N + 
Sbjct: 111 ERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQIT 170

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TG+L+SLSEQ+LVDCD        G  ++GC+GG+MN AFE+ +K GG+  ++DYPY   
Sbjct: 171 TGELISLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNAN 223

Query: 245 DRGHACKFDKSK--IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGV 300
           D G  C  DK+      ++  +  V  D+++     V + P++VAI A     Q Y  GV
Sbjct: 224 DLG-LCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGV 282

Query: 301 SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRN-- 358
                C   LDHGV++VGYGS          + YWII+NSWG +WG++GY K+ R  +  
Sbjct: 283 MTG-TCGISLDHGVVVVGYGST-------SGEDYWIIRNSWGLNWGDSGYVKLQRNIDDP 334

Query: 359 --VCGVDSMVS 367
              CG+  M S
Sbjct: 335 FGKCGIAMMPS 345


>gi|1848231|gb|AAB48120.1| cathepsin L-like protease [Leishmania major]
          Length = 443

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/310 (42%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|18394919|ref|NP_564126.1| Xylem cysteine proteinase 2 [Arabidopsis thaliana]
 gi|71153409|sp|Q9LM66.2|XCP2_ARATH RecName: Full=Xylem cysteine proteinase 2; Short=AtXCP2; Flags:
           Precursor
 gi|4836904|gb|AAD30607.1|AC007369_17 Putative cysteine proteinase [Arabidopsis thaliana]
 gi|6708183|gb|AAF25832.1|AF191028_1 papain-type cysteine endopeptidase XCP2 [Arabidopsis thaliana]
 gi|28466959|gb|AAO44088.1| At1g20850 [Arabidopsis thaliana]
 gi|110743795|dbj|BAE99733.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|332191910|gb|AEE30031.1| Xylem cysteine proteinase 2 [Arabidopsis thaliana]
          Length = 356

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/317 (40%), Positives = 174/317 (54%), Gaps = 26/317 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +   F KAY + EE   RF +FK NL+      K   S   G+ +F+DL+  EF++ 
Sbjct: 51  FENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKM 110

Query: 120 YLGLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           YLGL+  +    +          D+   P   DWR+KGAV  VK+QGSCGSCW+FST  A
Sbjct: 111 YLGLKTDIVRRDEERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAA 170

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG N + TG L +LSEQ+L+DCD         + ++GCNGGLM+ AFEY +K GGL +E
Sbjct: 171 VEGINKIVTGNLTTLSEQELIDCDT--------TYNNGCNGGLMDYAFEYIVKNGGLRKE 222

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQ 294
           EDYPY+  +     + D+S+      +  V + DE  +   L    PL+VAI+A     Q
Sbjct: 223 EDYPYSMEEGTCEMQKDESETVTINGHQDVPTNDEKSLLKALAHQ-PLSVAIDASGREFQ 281

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y GGV     C   LDHGV  VGYGS+       K   Y I+KNSWG  WGE GY ++ 
Sbjct: 282 FYSGGV-FDGRCGVDLDHGVAAVGYGSS-------KGSDYIIVKNSWGPKWGEKGYIRLK 333

Query: 355 RG----RNVCGVDSMVS 367
           R       +CG++ M S
Sbjct: 334 RNTGKPEGLCGINKMAS 350


>gi|401419663|ref|XP_003874321.1| cysteine peptidase A (CBA) [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|1706259|sp|P35591.2|CYSP1_LEIPI RecName: Full=Cysteine proteinase 1; AltName: Full=Amastigote
           cysteine proteinase A-1; Flags: Precursor
 gi|1220383|gb|AAA91859.1| cysteine proteinase [Leishmania pifanoi]
 gi|322490556|emb|CBZ25817.1| cysteine peptidase A (CBA) [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 354

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/367 (35%), Positives = 188/367 (51%), Gaps = 44/367 (11%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M  +  +LF + + +   V  G+       LI Q     D  +            A  H+
Sbjct: 1   MARRNPLLFAIVVTILFVVCYGS------ALIAQTPPPVDNFV------------ASAHY 42

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSDLTPAEFRRT 119
             FKK+  KA+    E  HRF  FK N++ A      +P A + ++ +F+DLTP EF + 
Sbjct: 43  GSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKL 102

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPA---DFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           YL      R  KD  +  +   +  P+     DWR+KGAV PVK+QG CGSCW+FS  G 
Sbjct: 103 YLNPDYYARHLKDHKED-VHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGN 161

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLM 234
           +EG    +   LVSLSEQ LV CD         + D GCNGGLM+ A  + +++  G + 
Sbjct: 162 IEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVF 212

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            E  YPYT          D+ ++ A +  F  +  DE++IA  + K GP+AVA++A   Q
Sbjct: 213 TEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQ 272

Query: 295 TYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y GGV    +C +  L+HGVL+VG+        +  + PYWI+KNSWG SWGE GY ++
Sbjct: 273 LYFGGVVS--LCLAWSLNHGVLIVGFN-------KNAKPPYWIVKNSWGSSWGEKGYIRL 323

Query: 354 CRGRNVC 360
             G N C
Sbjct: 324 AMGSNQC 330


>gi|405966498|gb|EKC31776.1| Cathepsin L [Crassostrea gigas]
          Length = 330

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 126/320 (39%), Positives = 175/320 (54%), Gaps = 26/320 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSATHGITQFSDLT 112
           +  + L+ K   K Y ++EE   R  I++ NL    +H     + D S   G+ ++ D+T
Sbjct: 24  DSEWQLYLKAHGKQYGAEEEARRR-VIWEGNLDYIEKHNLAADRGDYSFWLGMNEYGDMT 82

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR T  G + +    + +   P     DLP   DWR KG V P+K+QG CGSCWSFS
Sbjct: 83  NEEFRSTMNGYKMRNGTSRGSLYLPPSNIGDLPDTVDWRPKGYVTPIKNQGQCGSCWSFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG  F  TGKL SLSEQ LVDC  +         + GC GGLM+ AF+Y     G
Sbjct: 143 ATGSLEGQTFKKTGKLPSLSEQNLVDCSQK-------QGNHGCQGGLMDDAFQYIKDNSG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E  YPY    +   C+F+ + + A+ + F+ + S  E  + + +   GP++VAI+A 
Sbjct: 196 IDTESSYPYEA--KNGKCRFNAANVGATDSGFTDIKSKSESDLQSAVATVGPISVAIDAS 253

Query: 292 YM--QTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +M  Q Y  GV   + CS  RLDHGVL VGYG+          K YW++KNSWGESWG+ 
Sbjct: 254 HMSFQLYRSGVYHEFFCSETRLDHGVLAVGYGTE-------SGKDYWLVKNSWGESWGQK 306

Query: 349 GYYKICRG-RNVCGVDSMVS 367
           GY  + R  RN CG+ +  S
Sbjct: 307 GYIMMSRNKRNNCGIATSAS 326


>gi|151573016|gb|ABS17683.1| cathepsin L-1 [Artemia persimilis]
          Length = 334

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/328 (41%), Positives = 175/328 (53%), Gaps = 30/328 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKLDPSATHGITQ 107
           +LL  E H  LFK    K Y SQ E   R  I+  N  + A+H    +K + S    + +
Sbjct: 21  NLLADEWH--LFKATHKKEYPSQLEEKFRMKIYLENKHKVAKHNILFEKGEKSYQVAMNK 78

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL--PTN-DLPADFDWREKGAVGPVKDQGS 164
           F DL   EFR    G + K +    A+       P N ++P   DWREKGA+ PVKDQG 
Sbjct: 79  FGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGAITPVKDQGQ 138

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CG CW+FS+TGALEG  F  TGKLVSL EQ L+DC  +   E       GCNGGLM+ AF
Sbjct: 139 CGPCWAFSSTGALEGQTFRKTGKLVSLREQNLIDCSGKYGNE-------GCNGGLMDQAF 191

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGP 283
           +Y     G+  E  YPY   D    C+++     A    F  + S +ED++ A +   GP
Sbjct: 192 QYIKDNKGIDTENTYPYEAED--DVCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGP 249

Query: 284 LAVAINAVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           ++VAI+A +   Q Y  GV     C S  LDHGVL+VGYGS          K YW++KNS
Sbjct: 250 VSVAIDASHESFQFYSKGVYYEPSCDSDDLDHGVLVVGYGSD-------NGKDYWLVKNS 302

Query: 341 WGESWGENGYYKICRGR-NVCGVDSMVS 367
           W E WG+ GY KI R R N CGV +  S
Sbjct: 303 WSEHWGDQGYIKIARNRKNHCGVATAAS 330


>gi|28192371|gb|AAK07729.1| NTCP23-like cysteine proteinase [Nicotiana tabacum]
          Length = 360

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 144/374 (38%), Positives = 192/374 (51%), Gaps = 39/374 (10%)

Query: 9   FLVSLVV----FSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF---S 61
            L++LVV    F++  +G      +  IRQV   G   L   E+    ++G   H    +
Sbjct: 6   LLLALVVAGGLFASALAGPATFADENPIRQVVSDG---LHELENAILQVVGKTRHALSSA 62

Query: 62  LFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL 121
            F  ++ K Y S EE   RF +F  NL+    H K   S   G+ +F+DLT  EFRR  L
Sbjct: 63  RFAHRYGKRYESVEEIKQRFEVFLDNLKMIRSHNKKGLSYKLGVNEFTDLTWDEFRRDRL 122

Query: 122 GLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
           G  +        +   +  TN  LP    WRE G V PVK+QG CGSCW+FSTTGALE A
Sbjct: 123 GAAQNCSATTKGN---LKVTNVVLPETKGWREAGIVSPVKNQGKCGSCWTFSTTGALEAA 179

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
              A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YP
Sbjct: 180 YSQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKSNGGLDTEEAYP 232

Query: 241 YTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTY 296
           YTG  +   CKF    +   V    N ++ + DE + A  LV+  P+++A   +   + Y
Sbjct: 233 YTG--KNGLCKFSSENVGVKVIDSVNITLGAEDELKYAVALVR--PVSIAFEVIKGFKQY 288

Query: 297 IGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
             GV     C      ++H VL VGYG            PYW+IKNSWG  WG+NGY+K+
Sbjct: 289 KSGVYTSTECGNTPMDVNHAVLAVGYGVENGV-------PYWLIKNSWGADWGDNGYFKM 341

Query: 354 CRGRNVCGVDSMVS 367
             G+N+CG+ +  S
Sbjct: 342 EMGKNMCGIATCAS 355


>gi|354496134|ref|XP_003510182.1| PREDICTED: cathepsin F [Cricetulus griseus]
 gi|344250261|gb|EGW06365.1| Cathepsin F [Cricetulus griseus]
          Length = 462

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 136/319 (42%), Positives = 183/319 (57%), Gaps = 35/319 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S+EE   R T+F  N+ +A + + LD  +A +GIT+FSDLT  EF  
Sbjct: 165 FKDFMITYNRTYESREETQWRLTVFTRNMVKAQKIEALDRGTAQYGITKFSDLTEEEFYT 224

Query: 119 TYLG--LRRK----LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            YL   L++K    + L K  +       +  P ++DWR+KGAV  VKDQG CGSCW+FS
Sbjct: 225 IYLNPLLQKKPGSKMSLAKSIN-------DPAPPEWDWRKKGAVTKVKDQGMCGSCWAFS 277

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG +EG  FL  G L+SLSEQ+L+DCD           D  C GG+ ++A+      GG
Sbjct: 278 VTGNVEGQWFLNQGTLLSLSEQELLDCDK---------MDKACLGGMPSNAYTAIKSLGG 328

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  E+DY Y G     AC F   K    + +   +S +E ++AA L + GP++VAINA  
Sbjct: 329 LETEDDYSYKG--YVQACNFSAQKAKVYINDSVELSKNESKMAAWLAQKGPISVAINAFG 386

Query: 293 MQTYIGGVSCPY--ICSRRL-DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           MQ Y  G++ P   +CS  L DH VLLVGYG+           PYW IKNSWG +WGE G
Sbjct: 387 MQFYRHGIAHPLRPLCSPWLIDHAVLLVGYGNRS-------NTPYWAIKNSWGSNWGEEG 439

Query: 350 YYKICRGRNVCGVDSMVST 368
           YY + RG   CGV++M S+
Sbjct: 440 YYYLYRGSGACGVNTMASS 458


>gi|401430108|ref|XP_003879535.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
 gi|356491914|emb|CBZ40911.1| unnamed protein product [Leishmania mexicana MHOM/GT/2001/U1103]
          Length = 359

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/309 (42%), Positives = 167/309 (54%), Gaps = 25/309 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG CGSCW+FS+ G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGECGSCWAFSSVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G L
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 208

Query: 234 MREEDYPY-TGTDRGHAC-KFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPY +G      C    K  + A +    ++   E  +AA L KNGP+A+A++A 
Sbjct: 209 YTEDSYPYVSGNGYLPECSNSSKLVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDAS 268

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
              +Y  GV    I  ++++H VLLVGY   G       E PYW+IKNSWG  WGE GY 
Sbjct: 269 SFMSYKSGVLTACI-GKQVNHAVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGYV 320

Query: 352 KICRGRNVC 360
           ++  G N C
Sbjct: 321 RVVMGVNAC 329


>gi|47086859|ref|NP_997749.1| cathepsin L, 1 a precursor [Danio rerio]
 gi|42542930|gb|AAH66490.1| Cathepsin L1, a [Danio rerio]
          Length = 337

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/320 (42%), Positives = 172/320 (53%), Gaps = 25/320 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H+  +KK  +K Y + EE   R  I++ NL++   H        H    G+  F D+T  
Sbjct: 28  HWDQWKKWHSKKYHATEE-GWRRVIWEKNLKKIEMHNLEHSMGIHTYRLGMNHFGDMTHE 86

Query: 115 EFRRTYLGLRRK--LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EFR+   G + K   R        P     ++P   DWREKG V PVKDQG CGSCW+FS
Sbjct: 87  EFRQVMNGFKHKKDRRFRGSLFMEPNFI--EVPNKLDWREKGYVTPVKDQGECGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGALEG  F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y     G
Sbjct: 145 TTGALEGQMFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYVKDQNG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           L  EE YPY GTD    C FD    AA+   F  + S  E  +   +   GP++VAI+A 
Sbjct: 198 LDSEESYPYLGTD-DQPCHFDPKNSAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAG 256

Query: 292 Y--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  G+     C S  LDHGVL VGYG  G     +  K YWI+KNSW E+WG+ 
Sbjct: 257 HESFQFYQSGIYYEKECSSEELDHGVLAVGYGFEGE---DVDGKKYWIVKNSWSENWGDK 313

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  + + R N CG+ +  S
Sbjct: 314 GYIYMAKDRHNHCGIATAAS 333


>gi|401416326|ref|XP_003872658.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
 gi|14348750|emb|CAC41275.1| CPB2 protein [Leishmania mexicana]
 gi|322488882|emb|CBZ24132.1| putative cathepsin L-like protease [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 359

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/310 (41%), Positives = 168/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG CGSCW+FS+ G
Sbjct: 98  YLNGAAYFAAAKRHAAQHYRKARADLSAVPDAVDWREKGAVTPVKDQGECGSCWAFSSVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +EG  +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G L
Sbjct: 158 NIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHL 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S    + A + +  ++   E  +AA L KNGP+A+A++A
Sbjct: 209 YTEDSYPYV-SGNGYLPECSNSSELVVGAQIDSHVLIGSSEKAMAAWLAKNGPIAIALDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I  + ++H VLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct: 268 SSFMSYKSGVLTACI-GKEVNHAVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVVMGVNAC 329


>gi|74151179|dbj|BAE27712.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 173/322 (53%), Gaps = 25/322 (7%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FS 109
             AE H   +K    + Y + EE + R  I++ N+R    H     +  HG +     F 
Sbjct: 25  FSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFG 81

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW
Sbjct: 82  DMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCW 139

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS +G LEG  FL TGKL+SLSEQ LVDC H          + GCNGGLM+ AF+Y  +
Sbjct: 140 AFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKE 192

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  EE YPY   D   +CK+      A+   F  +   E+ +   +   GP++VA++
Sbjct: 193 NGGLDSEESYPYEAKDG--SCKYRAEFAVANDTGFVDIPQQEEALMKAVATVGPISVAMD 250

Query: 290 AVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +  +Q Y  G+   P   S+ LDHGVLLVGYG  G    + K   YW++KNSWG  WG
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWG 307

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
             GY KI + R N CG+ +  S
Sbjct: 308 MEGYIKIAKDRDNHCGLATAAS 329


>gi|26452046|dbj|BAC43113.1| putative cysteine proteinase RD21A precursor [Arabidopsis thaliana]
          Length = 362

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 178/311 (57%), Gaps = 30/311 (9%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
           K Y    E + RF IFK NL+    H  + D +   G+T+F+DLT  EFR  YL  R+K+
Sbjct: 53  KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYL--RKKM 110

Query: 128 RLPKDADQAP--ILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
              KD+ +    +    D LP + DWR  GAV  VKDQG+CGSCW+FS  GA+EG N + 
Sbjct: 111 ERNKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQIT 170

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TG+L+SLSEQ+LVDCD        G  ++GC+GG+MN AFE+ +K GG+  ++DYPY   
Sbjct: 171 TGELISLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNAN 223

Query: 245 DRGHACKFDKSK--IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGV 300
           D G  C  DK+      ++  +  V  D+++     V + P++VAI A     Q Y  GV
Sbjct: 224 DLG-LCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPVSVAIEASSQAFQLYKSGV 282

Query: 301 SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRN-- 358
                C   LDHGV++VGYGS          + YWII+NSWG +WG++GY K+ R  +  
Sbjct: 283 MTG-TCGISLDHGVVVVGYGST-------SGEDYWIIRNSWGLNWGDSGYVKLQRNIDDP 334

Query: 359 --VCGVDSMVS 367
              CG+  M S
Sbjct: 335 FGKCGIAMMPS 345


>gi|332326587|gb|AEE42617.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 166/311 (53%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  +L +LSEQQLV CD +         DSGCNGGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHRLTALSEQQLVSCDDK---------DSGCNGGLMTQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGT--DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           + E+ YPY  +  D        +    A +  +  +   E  +AA L K+GP+++A++A 
Sbjct: 209 LTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC       L+HGVLLVGY   G       E PYW+IKNSWGE WGE G
Sbjct: 269 SFMSYESGVLTSC---AGDALNHGVLLVGYNXTG-------EVPYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVTMGVNAC 329


>gi|224056176|ref|XP_002298740.1| predicted protein [Populus trichocarpa]
 gi|222845998|gb|EEE83545.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 176/305 (57%), Gaps = 28/305 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRR 118
           + ++  K  +AY +  E + RF IFK NL+    H  + +PS   G+ +F+DL+  E+R 
Sbjct: 25  YEMWLVKHGRAYNALGEKERRFEIFKDNLKFIDEHNSVGNPSYKLGLNKFADLSNDEYRS 84

Query: 119 TYLGLR-----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
            YLG R     R L  PK +++      +DLP   DWREKGAV PVKDQG CGSCW+FST
Sbjct: 85  VYLGTRMDGKGRLLGGPK-SERYLFKEGDDLPETVDWREKGAVAPVKDQGQCGSCWAFST 143

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
            GA+EG N + TG L SLSEQ+LVDCD         + + GCNGGLM+ AF++ ++ GG+
Sbjct: 144 VGAVEGINQIVTGNLTSLSEQELVDCDK--------TYNLGCNGGLMDYAFDFIIENGGI 195

Query: 234 MREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA-- 290
             EEDYPY   D    C  + K+    ++  +  V  ++++     V N P++VAI A  
Sbjct: 196 DTEEDYPYKAID--SMCDPNRKNARVVTIDGYEDVPQNDEKSLKKAVANQPVSVAIEAGG 253

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
              Q Y  GV     C  +LDHGV+ VGYG+            YWI++NSWG +WGENGY
Sbjct: 254 RGFQLYQSGVFTG-SCGTQLDHGVVTVGYGTE-------HGVDYWIVRNSWGPAWGENGY 305

Query: 351 YKICR 355
            ++ R
Sbjct: 306 IRMER 310


>gi|375073984|gb|AFA34859.1| cathepsin L-like protein [Trypanosoma rangeli]
          Length = 467

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 167/312 (53%), Gaps = 23/312 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF+ FK++  K Y S  E   R  +FK NL  A  H   +P A+ G+T FSDLT  EFR 
Sbjct: 37  HFAAFKQRHGKVYRSAAEEAFRLGVFKENLLLARLHAAANPHASFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKD---ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
            Y          +          +     PA  DWR +GAV  VKDQG CGSCW+FST G
Sbjct: 97  RYHNAAAHFAAAQKRARVPVEVEVEVGGAPAAVDWRARGAVTAVKDQGECGSCWAFSTIG 156

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--KAGGL 233
            +EG   LA   L SLSEQ LV CD+          D+GC+GGLM++AF++ +    G +
Sbjct: 157 NIEGQWHLAGNPLTSLSEQMLVSCDNA---------DNGCDGGLMDNAFDWIVGKNNGTV 207

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E  Y Y +G      C      + A ++    +  DED++AA L  NGPLA+A++A  
Sbjct: 208 YTEASYSYVSGGGNSQKCDMSGHVVGAVISGHVDLPKDEDKMAAWLAANGPLAIAVDATS 267

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
             +Y GGV    I S +LDHGV+LVGY  +          PYWIIKNSWG  WGE GY +
Sbjct: 268 FMSYTGGVLTNCI-SDQLDHGVVLVGYNDS-------SNPPYWIIKNSWGADWGEGGYIR 319

Query: 353 ICRGRNVCGVDS 364
           I +G N C V++
Sbjct: 320 IQKGTNQCLVNN 331


>gi|157864855|ref|XP_001681136.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124430|emb|CAJ02286.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/310 (41%), Positives = 168/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  + A L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMTAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|74229746|ref|YP_308950.1| cathepsin [Trichoplusia ni SNPV]
 gi|72259660|gb|AAZ67431.1| cathepsin [Trichoplusia ni SNPV]
          Length = 344

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/374 (35%), Positives = 196/374 (52%), Gaps = 40/374 (10%)

Query: 4   KTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLF 63
           K ++LF V +V     +SG L + V+ +I  V        + H     +L  A  +F  F
Sbjct: 2   KKIILFFVFVV-----ASGGLDNGVNAVIDYVA------AAPHFKLQYNLERAPQYFETF 50

Query: 64  KKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL 123
           + K+ K YA   E D+R+ IFK NL       + + SA + I +F+DLT  E    + GL
Sbjct: 51  QTKYKKVYADDNERDYRYKIFKTNLEIINLKNQQNDSAVYNINKFADLTKNEVIAKFTGL 110

Query: 124 RRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
             K    K+     I+  P+      FDWR+   +  VKDQG CGSCW+FST   LE   
Sbjct: 111 GVKSPNLKNFCDPLIVDGPSKYTQETFDWRQFNKITSVKDQGFCGSCWAFSTIAGLESQY 170

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
            +   + + LSEQQLVDCD         + D GC GGL+++A+E  +  GG+  EEDYPY
Sbjct: 171 AIKYNEHIDLSEQQLVDCD---------TIDMGCAGGLLHTAYEEIMSMGGVEYEEDYPY 221

Query: 242 TGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV 300
                   C+ +  K   SV N +  +   ED++   L + GP+AVA++AV +  Y GG+
Sbjct: 222 RSVQ--GPCRIENDKFQVSVDNCYRYILYSEDKLKDVLHEMGPIAVAVDAVDLTDYYGGI 279

Query: 301 --SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRN 358
             SC    +  L+H VLLVGYG+           P+W++KNSWG  +GENG+ ++ R  N
Sbjct: 280 ITSCK---NYGLNHAVLLVGYGTEN-------GIPFWVLKNSWGTDYGENGFVRVKRNVN 329

Query: 359 VCGVDSMVSTVAAA 372
            CG   M++ +AA+
Sbjct: 330 SCG---MINELAAS 340


>gi|89274062|dbj|BAE80740.1| cysteine proteinase [Platycodon grandiflorus]
          Length = 462

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/364 (36%), Positives = 193/364 (53%), Gaps = 37/364 (10%)

Query: 3   SKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSL 62
           S  + L     V  SA+    +  D     +      DE+++ +ES              
Sbjct: 7   SMAIALLFALFVASSALDMSIINYDATHASKSSWRTDDEVMAMYES-------------- 52

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHGITQFSDLTPAEFRRTYL 121
           +  K  K+Y +  E + RF IFK NLR    H  + + S   G+ +F+DLT  E+R TYL
Sbjct: 53  WLVKHGKSYNALGEKEKRFQIFKDNLRFIDEHNAEENLSYKVGLNRFADLTNEEYRSTYL 112

Query: 122 GLRRKLRLPK-DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
           G + K +L K  +D+      + LP   DWR KGAV P+KDQGSCGSCW+FST  A+EG 
Sbjct: 113 GAKSKPKLSKVKSDRYAPRVGDSLPESVDWRAKGAVAPIKDQGSCGSCWAFSTVNAVEGI 172

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           N + TG+L++LSEQ+LVDCD         S + GC+GGLM+  FE+ +  GG+  ++DYP
Sbjct: 173 NQIVTGELITLSEQELVDCDK--------SYNEGCDGGLMDYGFEFIINNGGIDTDKDYP 224

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN--AVYMQTYIG 298
           Y G D     ++ K+    ++ ++  V ++ ++     V + P++V I       Q Y  
Sbjct: 225 YLGRD-ARCDQYRKNAKVVTIDSYEDVPVNNEEALKKAVASQPVSVGIEGGGRAFQFYDS 283

Query: 299 GVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRN 358
           G+     C   LDHGV +VGYG+        K K YWI++NSWG SWGE GY ++   RN
Sbjct: 284 GIFTG-KCGTALDHGVNVVGYGTE-------KGKDYWIVRNSWGSSWGEAGYIRM--ERN 333

Query: 359 VCGV 362
           + G 
Sbjct: 334 LAGT 337


>gi|394331735|gb|AFN27090.1| cysteine protease [Leishmania major]
          Length = 348

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/310 (41%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWR+KGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|157864849|ref|XP_001681133.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124427|emb|CAJ02283.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/310 (41%), Positives = 169/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWG+ WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGKDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|55740406|gb|AAV63979.1| cathepsin L1 precursor [Artemia parthenogenetica]
          Length = 338

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/328 (41%), Positives = 176/328 (53%), Gaps = 30/328 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKLDPSATHGITQ 107
           +LL  E H  LFK    K Y SQ E   R  I+  N  + A+H    +K + S    + +
Sbjct: 25  NLLADEWH--LFKATHKKEYPSQLEEKLRMKIYLENKHKVAKHNILYEKGEKSYQVAMNK 82

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL--PTN-DLPADFDWREKGAVGPVKDQGS 164
           F DL   EFR    G + K +    A+       P N ++P   DWREKGA+ PVKDQG 
Sbjct: 83  FGDLLHHEFRSIMNGYQHKKQNSSRAESTFTFMEPANVEVPESVDWREKGAITPVKDQGQ 142

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCW+FS+TGALEG  F  TGKLVSLSEQ L+DC  +   E       GCNGGLM+ AF
Sbjct: 143 CGSCWAFSSTGALEGQTFRKTGKLVSLSEQNLIDCSGKYGNE-------GCNGGLMDQAF 195

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGP 283
           +Y     G+  E  YPY   D    C+++     A    F  + S +ED++ A +   GP
Sbjct: 196 QYIKDNKGIDTENTYPYEAEDG--VCRYNPRNRGAVDRGFVDIPSGEEDKLKAAVATVGP 253

Query: 284 LAVAINAVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           ++VAI+A +   Q Y  G      C S  LDHGVL+VGYGS          + YW++KNS
Sbjct: 254 VSVAIDASHESFQFYSKGXYYEPSCDSDDLDHGVLVVGYGSD-------NGEDYWLVKNS 306

Query: 341 WGESWGENGYYKICRGR-NVCGVDSMVS 367
           W E WG+ GY KI R R N CGV +  S
Sbjct: 307 WSEHWGDEGYIKIARNRKNHCGVATAAS 334


>gi|442754503|gb|JAA69411.1| Putative cathepsin l-like cysteine proteinase b [Ixodes ricinus]
          Length = 335

 Score =  215 bits (548), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/329 (39%), Positives = 180/329 (54%), Gaps = 31/329 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQ 107
           ++LGAE  +S FK K  K+Y S+ E   R  I+  N  + A+H +     +   +  + +
Sbjct: 21  EVLGAE--WSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNE 78

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN----DLPADFDWREKGAVGPVKDQG 163
           F D+   EF  T  G +R  +         + P N     LP   DWR KGAV PVK+QG
Sbjct: 79  FGDMLHHEFVSTRNGFKRNYKDQPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQG 138

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCW+FS TG+LEG +F  +G +VSLSEQ LVDC  +         ++GC GGLM++A
Sbjct: 139 QCGSCWAFSATGSLEGQHFRKSGSMVSLSEQNLVDCSTDFG-------NNGCEGGLMDNA 191

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNG 282
           F+Y     G+  E+ YPY GTD    C F KS + A+ + F  +    E Q+   +   G
Sbjct: 192 FKYIRANKGIDTEKSYPYNGTDG--TCHFKKSTVGATDSGFVDIKEGSETQLKKAVATVG 249

Query: 283 PLAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
           P++VAI+A +   Q Y  GV   P   S  LDHGVL+VGYG+       L    YW++KN
Sbjct: 250 PISVAIDASHESFQFYSDGVYDEPECDSESLDHGVLVVGYGT-------LNGTDYWLVKN 302

Query: 340 SWGESWGENGYYKICRG-RNVCGVDSMVS 367
           SWG +WG+ GY ++ R  +N CG+ S  S
Sbjct: 303 SWGTTWGDEGYIRMSRNKKNQCGIASSAS 331


>gi|148927396|gb|ABR19829.1| cysteine proteinase [Elaeis guineensis]
          Length = 358

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/351 (39%), Positives = 183/351 (52%), Gaps = 34/351 (9%)

Query: 27  DVDQLIRQVTDGGDEILSHHESTNNDLLGAEH---HFSLFKKKFNKAYASQEEHDHRFTI 83
           D   LI+ VT+  D +    E++   +LG      HF+ F  ++ K Y S EE   RF I
Sbjct: 26  DEANLIQSVTERIDSL----ETSLLGVLGQTRNALHFARFAHRYGKRYQSVEEMKLRFAI 81

Query: 84  FKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND 143
           F  NL       +       GI +++D++  EFR + LG  +        +    +    
Sbjct: 82  FMENLELIRSTNRRGLPYKLGINRYADMSWEEFRASRLGAAQNCSATLKGNHK--MTDEL 139

Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
           LP   DWRE G V PVKDQGSCGSCW+FSTTGALE A   ATGK +SLSEQQLVDC +  
Sbjct: 140 LPKTKDWREDGIVSPVKDQGSCGSCWTFSTTGALEAAYTQATGKGISLSEQQLVDCAYAF 199

Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV-- 261
           +       + GCNGGL + AFEY    GGL  EE YPY G +    C F    +   V  
Sbjct: 200 N-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPYAGVN--GFCHFKPENVGVKVVE 250

Query: 262 -ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLL 316
             N ++ + DE   A  LV+  P+++A   V   + Y GGV     C R    ++H VL 
Sbjct: 251 SVNITLGAEDELLHAVGLVR--PVSIAFEVVSGFRFYKGGVYTSDTCGRTQMDVNHAVLA 308

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
           VGYG            PYW+IKNSWGE WG +GY+K+  G+N+CG+ +  S
Sbjct: 309 VGYGVE-------NGVPYWLIKNSWGEEWGVDGYFKMELGKNMCGIATCAS 352


>gi|357130141|ref|XP_003566711.1| PREDICTED: xylem cysteine proteinase 1-like [Brachypodium
           distachyon]
          Length = 457

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/332 (40%), Positives = 183/332 (55%), Gaps = 29/332 (8%)

Query: 49  TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI 105
           +  DL   +    LF+K   K  KAYAS EE  HRF +FK NL+   +  +   S   G+
Sbjct: 136 SEEDLSSNDRIIELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKVNREVTSYWLGL 195

Query: 106 TQFSDLTPAEFRRTYLGLR--RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQG 163
            +F+DLT  EF+ TYLGL      R  + + +   +  +DLP   DWR KGAV  VK+QG
Sbjct: 196 NEFADLTHEEFKATYLGLAPPAPARESRGSFKYEDVSADDLPKSVDWRTKGAVTEVKNQG 255

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCW+FST  A+EG N + TG L +LSEQ+L+DC  +         ++GCNGGLM+ A
Sbjct: 256 QCGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDCSVD--------GNNGCNGGLMDYA 307

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNG 282
           F Y   +GGL  EE YPY   + G      KS+  A +++ +  V    +Q     + + 
Sbjct: 308 FSYIASSGGLHTEEAYPYL-MEEGSCGDGKKSESEAVTISGYEDVPAHNEQALIKALAHQ 366

Query: 283 PLAVAINAV--YMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
           P++VAI A   + Q Y GGV   P  C  +LDHGV  VGYGS      + K   Y I++N
Sbjct: 367 PVSVAIEASGRHFQFYSGGVFDGP--CGTQLDHGVAAVGYGSD-----KGKGHDYIIVRN 419

Query: 340 SWGESWGENGYYKICR----GRNVCGVDSMVS 367
           SWG  WGE GY ++ R    G  +CG++ M S
Sbjct: 420 SWGAKWGEKGYIRMKRGTGKGEGLCGINKMAS 451


>gi|394331814|gb|AFN27126.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/312 (41%), Positives = 168/312 (53%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPYAVDWRKKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
           ++E    LA  +L +LSEQQLV CD +         DSGC GGLM  AFE+ L+   G +
Sbjct: 158 SIESQWALAGHRLTALSEQQLVSCDDK---------DSGCGGGLMLQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S      A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEDSYPYVSSS-GYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y  GV  SC       L+HGVLLVGY   G       E PYW+IKNSWGE WGEN
Sbjct: 268 SSFMSYESGVLTSCA---GDTLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEN 317

Query: 349 GYYKICRGRNVC 360
           GY ++  G N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|194320502|gb|ACF48469.1| cathepsin L [Triatoma brasiliensis]
          Length = 330

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/326 (41%), Positives = 178/326 (54%), Gaps = 30/326 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA----ARHQKLDPSATHGITQ 107
           D+   E H  +FK    K Y +Q E   R  IF  N ++     A++++ + S    +  
Sbjct: 21  DIYPEEWH--VFKAMHGKTYKNQFEEMFRMKIFMDNKKKIEAHNAKYEQGEVSYKMMMNH 78

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCG 166
           F DL   EF+    G +      ++ +     P+N +LP   DWR+KGAV PVKDQG CG
Sbjct: 79  FGDLMVHEFKALMNGFKMSPDTKRNGEL--YFPSNSNLPKTVDWRQKGAVTPVKDQGQCG 136

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCWSFS TG+LEG  FL TGKLVSLSEQ LVDC            ++GC GGLM+ AF+Y
Sbjct: 137 SCWSFSATGSLEGQVFLKTGKLVSLSEQNLVDC-------STSYGNNGCEGGLMDQAFQY 189

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAAS-VANFSVVSLDEDQIAANLVKNGPLA 285
                G+  E  YPY    R + C+F K+K+  +   +  + + DE  +   L   GP++
Sbjct: 190 VSDNKGIDTEASYPYEA--RENTCRFKKNKVGGTDKGHVDIPAGDEKALQNALATVGPIS 247

Query: 286 VAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           VAI+A +   Q Y  GV + P   S  LDHGVL VGYG+          + YW++KNSWG
Sbjct: 248 VAIDANHGSFQFYSKGVYNEPNCSSYDLDHGVLAVGYGTE-------NGQDYWLVKNSWG 300

Query: 343 ESWGENGYYKICRGR-NVCGVDSMVS 367
            SWGENGY KI R   N CG+ SM S
Sbjct: 301 PSWGENGYIKIARNHSNHCGIASMAS 326


>gi|124484387|dbj|BAF46304.1| cysteine proteinase precursor [Ipomoea nil]
          Length = 474

 Score =  215 bits (548), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/316 (40%), Positives = 174/316 (55%), Gaps = 26/316 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAE 115
           +  F  +  K  K+Y + +E D RF IF+ NL+       L+  S   G+ +F+D+T  E
Sbjct: 47  KEMFESWLVKHGKSYNAVDEKDKRFKIFRDNLKYIDEKNSLENRSYKLGLNRFADITNEE 106

Query: 116 FRRTYLGLRR---KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           +R  YLG +R   +  +   +D+   +  + LP   DWREKGAV  VKDQGSCGSCW+FS
Sbjct: 107 YRTGYLGAKRDASRNMVKSKSDRYAPVAGDSLPDSIDWREKGAVTGVKDQGSCGSCWAFS 166

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           T  A+EG N LATG L+SLSEQ+LVDCD +         + GCNGG M  AF++ +K GG
Sbjct: 167 TIAAVEGVNQLATGNLISLSEQELVDCDRK--------INQGCNGGDMGYAFQFIIKNGG 218

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA-- 290
           +  EEDYPYTG D         +   AS+  +  V ++ ++     V N P++VAI A  
Sbjct: 219 IDSEEDYPYTGKDGKCDSYRQNNAKVASIDGYEEVPVNNEKSLQKAVANQPVSVAIEAGG 278

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
              Q Y  G+     C   LDHGV  VGYG+            YWI+KNSWG+ WGE GY
Sbjct: 279 YDFQLYSSGIFTG-SCGTDLDHGVAAVGYGTENGV-------DYWIVKNSWGDYWGEKGY 330

Query: 351 YKICRG----RNVCGV 362
            ++ R       +CG+
Sbjct: 331 VRMQRNVKAKTGLCGI 346


>gi|162463464|ref|NP_001104879.1| cysteine proteinase Mir3 precursor [Zea mays]
 gi|2425066|gb|AAB88263.1| cysteine proteinase Mir3 [Zea mays]
          Length = 480

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/321 (39%), Positives = 176/321 (54%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E T+ +   A   ++ +     + Y +    + R+ +F+ NLR    H     + 
Sbjct: 29  IVSYGERTDEE---ARRMYAEWMAAHGRTYNAVGAEERRYQVFRDNLRYIDAHNAAADAG 85

Query: 102 TH----GITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAV 156
            H    G+ +F+DLT  E+  TYLG R R  R  K   +       DLP   DWR KGAV
Sbjct: 86  VHSFRLGLNRFADLTNDEYPATYLGARTRPQRDRKLGARYHAADNEDLPESVDWRAKGAV 145

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             VKDQGSCG+CW+FST  A+EG N + TG L+SLSEQ+LVDCD         S + GCN
Sbjct: 146 AEVKDQGSCGTCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNQGCN 197

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AFE+ +  GG+  E+DYPY GTD G      K+    ++ ++  V  ++++   
Sbjct: 198 GGLMDYAFEFIINNGGIDTEKDYPYKGTD-GRCDVNRKNAKVVTIDSYEDVPANDEKSLQ 256

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V N P++VAI A     Q Y  G+     C  RLDHGV  VGYG+          K Y
Sbjct: 257 KAVANQPVSVAIEAAGTAFQLYSSGIFTG-SCGTRLDHGVTAVGYGTE-------NGKDY 308

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI+KNSWG SWGE+GY ++ R
Sbjct: 309 WIVKNSWGSSWGESGYVRMER 329


>gi|255567869|ref|XP_002524912.1| cysteine protease, putative [Ricinus communis]
 gi|223535747|gb|EEF37409.1| cysteine protease, putative [Ricinus communis]
          Length = 366

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 184/325 (56%), Gaps = 37/325 (11%)

Query: 45  HHEST---NNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQK-LDPS 100
           HH+S+   +N+++     ++ +  K +K Y    E + RF IFK NLR    H    + +
Sbjct: 33  HHQSSWRSDNEVISM---YNWWLAKHSKTYNKLGEREKRFEIFKNNLRFIDEHNNSKNRT 89

Query: 101 ATHGITQFSDLTPAEFRRTYLGLR----RKLRLPKDADQAPILPTND-LPADFDWREKGA 155
              G+T+F+DLT  E+R  +LG +    R+L   K+  Q       D LP   DWR+ GA
Sbjct: 90  YKVGLTRFADLTNEEYRAKFLGTKSDPKRRLMKSKNPSQRYAFKAGDVLPESIDWRQSGA 149

Query: 156 VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGC 215
           V  +KDQGSCGSCW+FST  A+EG N + TG+L+SLSEQ+LVDCD         S ++GC
Sbjct: 150 VSAIKDQGSCGSCWAFSTIAAVEGVNKIVTGELISLSEQELVDCDR--------SYNAGC 201

Query: 216 NGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI---AASVANFSVVSLDED 272
           NGGLM++AF++ +  GG+  ++DYPY   D     K D +K+   A ++  F  V   ++
Sbjct: 202 NGGLMDNAFQFIINNGGIDTDKDYPYQAVD----GKCDTTKVKNKAVTIDGFEDVMAFDE 257

Query: 273 QIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLK 330
                 V + P++VAI A  + +Q Y  GV     C   LDHGV++VGYG+         
Sbjct: 258 MALQKAVAHQPVSVAIEASGMALQFYQSGVFTGE-CGSALDHGVVIVGYGTE-------D 309

Query: 331 EKPYWIIKNSWGESWGENGYYKICR 355
              YW+++NSWG  WGENGY K+ R
Sbjct: 310 GIDYWLVRNSWGRDWGENGYIKMQR 334


>gi|332326581|gb|AEE42614.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 167/311 (53%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  +L +LSEQQLV CD +         DSGC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHRLTALSEQQLVSCDDK---------DSGCGGGLMTQAFEWLLRNMNGTM 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPY + T    AC      +  A +  +  +   E  +AA L K+GP+++A++A 
Sbjct: 209 XTEDSYPYVSSTGDVPACTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC     + L+HGVLLVGY   G       E PYW+IKNSWGE WGE G
Sbjct: 269 SFMSYXSGVLTSC---AGKXLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVTMGVNAC 329


>gi|12847813|dbj|BAB27719.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 172/322 (53%), Gaps = 25/322 (7%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FS 109
             AE H   +K    + Y + EE + R  I++ N+R    H     +  HG +     F 
Sbjct: 25  FSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFG 81

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW
Sbjct: 82  DMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCW 139

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS +G LEG  FL TGKL+SLSEQ LVDC H          + GCNGGLM+ AF+Y  +
Sbjct: 140 AFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDYAFQYIKE 192

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  EE YPY   D   +CK+      A+   F  +   E  +   +   GP++VA++
Sbjct: 193 NGGLDSEESYPYEAKDG--SCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 290 AVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +  +Q Y  G+   P   S+ LDHGVLLVGYG  G    + K   YW++KNSWG  WG
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWG 307

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
             GY KI + R N CG+ +  S
Sbjct: 308 MEGYIKIAKDRDNHCGLATAAS 329


>gi|356553978|ref|XP_003545327.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 496

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/362 (37%), Positives = 189/362 (52%), Gaps = 41/362 (11%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M   T++L      V SA+    +  D        +D  +E++S +E             
Sbjct: 36  MAMATILLLFTVFAVSSALDMSIISYDNAHAATSRSD--EELMSMYEQ------------ 81

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHGITQFSDLTPAEFRRT 119
             +  K  K Y +  E + RF IFK NLR    H  + D +   G+ +F+DLT  E+R  
Sbjct: 82  --WLVKHGKVYNALGEKEKRFQIFKDNLRFIDDHNSQEDRTYKLGLNRFADLTNEEYRAK 139

Query: 120 YLGLR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YLG +    R+L        AP +  + LP   DWR++GAV PVKDQG CGSCW+FS  G
Sbjct: 140 YLGTKIDPNRRLGKTPSNRYAPRV-GDKLPESVDWRKEGAVPPVKDQGGCGSCWAFSAIG 198

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           A+EG N + TG+L+SLSEQ+LVDCD           + GCNGGLM+ AFE+ +  GG+  
Sbjct: 199 AVEGINKIVTGELISLSEQELVDCDT--------GYNEGCNGGLMDYAFEFIINNGGIDS 250

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN--AVYM 293
           EEDYPY G D G    + K+    S+ ++  V   ++      V N P++VAI       
Sbjct: 251 EEDYPYRGVD-GRCDTYRKNAKVVSIDDYEDVPAYDELALKKAVANQPVSVAIEGGGREF 309

Query: 294 QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           Q Y+ GV     C   LDHGV+ VGYG+A           YWI++NSWG SWGE+GY ++
Sbjct: 310 QLYVSGVFTGR-CGTALDHGVVAVGYGTA-------NGHDYWIVRNSWGPSWGEDGYIRL 361

Query: 354 CR 355
            R
Sbjct: 362 ER 363


>gi|168047065|ref|XP_001775992.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672650|gb|EDQ59184.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 336

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 135/351 (38%), Positives = 186/351 (52%), Gaps = 34/351 (9%)

Query: 24  LIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTI 83
           ++ D++ L         EIL H    + D+L    HF+ F  K+ K Y + EE  HRF  
Sbjct: 1   MVTDLEALASTSAGLFTEILGH----SRDVL----HFAGFAAKYKKEYKTVEELKHRFVT 52

Query: 84  FKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND 143
           F  +++    H K   S +  + +F+D+T  EFR + L ++ +           +L    
Sbjct: 53  FLESVKLVETHNKGQHSYSLAVNEFADMTFEEFRDSRL-MKGEQNCSATVGN-HVLTGES 110

Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
           LP   DWRE+G V  VK+Q SCGSCW+FSTTGALE A+  ATGK+V LSEQQLVDC  E 
Sbjct: 111 LPKTKDWREEGIVSQVKNQASCGSCWTFSTTGALEAAHAQATGKMVLLSEQQLVDCAGEF 170

Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN 263
           +       + GC GGL + AFEY    GG+  E+ YPY   D    C+F K+ I A V  
Sbjct: 171 N-------NFGCGGGLPSQAFEYIRYNGGIDTEDSYPYNAKDS--QCRFHKNTIGAQV-- 219

Query: 264 FSVVSLD---EDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICS---RRLDHGVLL 316
           + VV++    E Q+   +    P++VA   V+  + Y GGV     C    + ++H VL 
Sbjct: 220 WDVVNITEGAETQLKHAIATMRPVSVAFEVVHDFRLYNGGVYTSLNCHTGPQTVNHAVLA 279

Query: 317 VGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
           VGYG            PYWIIKNSWG  WG NGY+ +  G+N+CGV +  S
Sbjct: 280 VGYGEDENGV------PYWIIKNSWGADWGMNGYFNMEMGKNMCGVATCAS 324


>gi|161408097|dbj|BAF94152.1| cathepsin L-like cysteine protease 2 [Plautia stali]
          Length = 334

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 180/321 (56%), Gaps = 30/321 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKLDPSATHGITQFSDLTPAE 115
           F+LFKK   K Y ++ E  +R  IF  N +R  +H    ++   S    +   +D+   E
Sbjct: 27  FTLFKKFHRKEYDNELEESYRKKIFLENKKRIEKHNSRYKQGKVSFKLKLNHLADMLIHE 86

Query: 116 FRRTYLGLRRKLRLPKDADQAP--ILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           +   YLG  +  +   +  Q+   I P +  L  + DWR KGAV PVK+QG CGSCW+FS
Sbjct: 87  YSDVYLGFNKSSKANNNKLQSYTFIPPAHVTLNKEVDWRTKGAVTPVKNQGHCGSCWAFS 146

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSC-DSGCNGGLMNSAFEYTLKAG 231
           TTGALEG NF  TGKLVSLSEQ LVDC         GS  ++GC GGLM++AF+Y  +  
Sbjct: 147 TTGALEGQNFRKTGKLVSLSEQNLVDC--------SGSYGNNGCEGGLMDNAFQYIKENH 198

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINA 290
           G+  E+ YPY G D    C+F K+ I A+ + F  +   DE+ +   +   GP++VAI+A
Sbjct: 199 GIDTEKSYPYEGEDE--TCRFRKTSIGATDSGFVDITQGDEEALMQAVATIGPISVAIDA 256

Query: 291 VY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
            +   Q Y  GV   P   S  LDHGVL+VGYG           + YW++KNSWG  WG+
Sbjct: 257 SHQSFQFYSEGVYYEPECSSENLDHGVLVVGYGVE-------DNQKYWLVKNSWGTQWGD 309

Query: 348 NGYYKICRGR-NVCGVDSMVS 367
            GY K+ R + N CG+ +  S
Sbjct: 310 GGYIKMARDQDNNCGIATQAS 330


>gi|356517188|ref|XP_003527271.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 350

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/315 (39%), Positives = 173/315 (54%), Gaps = 25/315 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  +  K Y + EE   RF IFK NL+      K+  +   G+ +F+DL+  EF   
Sbjct: 48  FESWMSRHGKIYENIEEKLLRFEIFKDNLKHIDERNKVVSNYWLGLNEFADLSHREFNNK 107

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           YLGL+      +++ +       +LP   DWR+KGAV PVK+QGSCGSCW+FST  A+EG
Sbjct: 108 YLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEG 167

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
            N + TG L SLSEQ+L+DCD         + ++GCNGGLM+ AF + ++ GGL +EEDY
Sbjct: 168 INQIVTGNLTSLSEQELIDCDR--------TYNNGCNGGLMDYAFSFIVENGGLHKEEDY 219

Query: 240 PYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           PY   +    C+  K +    +++ +  V  + +Q     + N PL+VAI A     Q Y
Sbjct: 220 PYIMEE--GTCEMTKEETQVVTISGYHDVPQNNEQSLLKALANQPLSVAIEASGRDFQFY 277

Query: 297 IGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
            GGV   + C   LDHGV  VGYG+A       K   Y  +KNSWG  WGE GY ++ R 
Sbjct: 278 SGGVFDGH-CGSDLDHGVAAVGYGTA-------KGVDYITVKNSWGSKWGEKGYIRMRRN 329

Query: 357 ----RNVCGVDSMVS 367
                 +CG+  M S
Sbjct: 330 IGKPEGICGIYKMAS 344


>gi|33348834|gb|AAQ16117.1| cathepsin L-like cysteine proteinase A [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 332

 Score =  215 bits (547), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 175/321 (54%), Gaps = 30/321 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K+Y S  E   RF IF  N     +  A++ K   S   G+ QF DL   
Sbjct: 26  QWEAFKTTHKKSYESHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF + + G R + R  + +   P    ND  LP+  DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFAKIFNGYRGQ-RTSRGSTFMPPANVNDSSLPSTVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL  G+LVSLSEQ LVDC            ++GC GGLM++AF+Y     G
Sbjct: 145 ATGSLEGQHFLKDGELVSLSEQNLVDCSQSFG-------NNGCEGGLMDNAFKYIKANDG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  EE YPY   D    C+F K  + A+   F  +    ED +   +   GP++VAI+A 
Sbjct: 198 IDAEESYPYEAMD--DKCRFKKEDVGATDTGFVDIEGGSEDDLKKAVATVGPISVAIDAG 255

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKE-KPYWIIKNSWGESWGE 347
           +   Q Y  GV   P   S  LDHGVL VGYG        +K+ K YW++KNSWG SWG+
Sbjct: 256 HSSFQLYSEGVYDEPECSSEELDHGVLAVGYG--------VKDGKKYWLVKNSWGGSWGD 307

Query: 348 NGYYKICRGR-NVCGVDSMVS 367
           NGY  + R + N CG+ S  S
Sbjct: 308 NGYILMSRDKNNQCGIASAAS 328


>gi|196002275|ref|XP_002111005.1| expressed hypothetical protein [Trichoplax adhaerens]
 gi|190586956|gb|EDV27009.1| expressed hypothetical protein [Trichoplax adhaerens]
          Length = 325

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/314 (39%), Positives = 171/314 (54%), Gaps = 23/314 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           +  +K    K Y +Q E D R  +F  N++  A H     +    I +FSDLT  EF +T
Sbjct: 25  WEAWKSFHGKKYHNQGEDDFRHYVFLQNIKTIAAHNA-KSTFKMAINEFSDLTRKEFVKT 83

Query: 120 YLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           Y G R  ++   +     + P N ++P + DWR++G V P+K+QG CGSCW+FSTTG+LE
Sbjct: 84  YNGYRLSMKKSTNKPSTFMAPLNTNMPTEVDWRKEGYVTPIKNQGRCGSCWAFSTTGSLE 143

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G +F  TGKLVSLSEQ L+DC            + GC GG M+ AFEY     G+  E  
Sbjct: 144 GQHFRKTGKLVSLSEQNLIDC-------SAAEGNDGCGGGFMDDAFEYIKLNNGIDTEAS 196

Query: 239 YPYTGTDRGHACKFDKS-KIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQT 295
           YPY G  R   C++ K+ K A       +    ED + A +   GP++VAI+A +     
Sbjct: 197 YPYEG--RDDICRYKKTNKGAIDTGYMDIKQYSEDDLKAAVATVGPISVAIDASHKSFHM 254

Query: 296 YIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y  GV     CS+  LDHGVL+VGYG+          + YW++KNSWG  WG NGY K+ 
Sbjct: 255 YHTGVYHEPECSQTVLDHGVLVVGYGTE-------NGEDYWLVKNSWGTDWGMNGYIKMS 307

Query: 355 RGR-NVCGVDSMVS 367
           R R N CG+ +  S
Sbjct: 308 RNRSNNCGIATNAS 321


>gi|157864845|ref|XP_001681131.1| cathepsin L-like protease [Leishmania major strain Friedlin]
 gi|68124425|emb|CAJ02281.1| cathepsin L-like protease [Leishmania major strain Friedlin]
          Length = 348

 Score =  215 bits (547), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 130/310 (41%), Positives = 168/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  + A L KNGP+++A++A
Sbjct: 209 STEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMTAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|343470212|emb|CCD17026.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 445

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 119/316 (37%), Positives = 171/316 (54%), Gaps = 21/316 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG C S W+F+  G
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGKAPEAVDWRKKGAVTPVKDQGKCDSSWAFTVIG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD           D GC  G M++AF++ + +  G +
Sbjct: 158 NIEGQWKIAGHELTSLSEQMLVSCDTN---------DLGCRAGFMDTAFKWIVSSNNGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      C      + A++ +   +  +E+ IA  L K GP+A+A++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCNKSGKVVGANIDDHVHILDNENAIAEWLAKKGPVAIAVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q+Y GGV    I S+ ++   LLVGY           + PYWIIKNSW + WGE GY +
Sbjct: 269 FQSYTGGVLTSCI-SKEVNSAALLVGYDDTS-------KPPYWIIKNSWSKGWGEEGYIR 320

Query: 353 ICRGRNVCGVDSMVST 368
           I +G N C +   VS+
Sbjct: 321 IEKGTNQCRMKEYVSS 336


>gi|1581747|prf||2117247C Cys protease:ISOTYPE=3
          Length = 469

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 166/312 (53%), Gaps = 25/312 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK++  K Y S  E   R  +FK NL  A  H   +P A+ G+T FSDLT  EFR 
Sbjct: 37  QFAAFKQRHGKVYGSAAEETFRLGVFKENLLFARLHAAANPHASFGVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPILPT-----NDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
            Y          +   + P+           PA  DWR +GAV  +KDQG+C SCW+FST
Sbjct: 97  RYHNAAAHFAAAQKRVRVPVEVEVEVEVGGAPAAVDWRARGAVTAIKDQGNCSSCWAFST 156

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--G 231
            G +EG   LA   L  LSEQ LV CD+          D+GC+GGLM+SAF++ ++   G
Sbjct: 157 IGNIEGQWHLAGNPLTGLSEQMLVSCDNA---------DNGCDGGLMDSAFDWIVEQNNG 207

Query: 232 GLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
            +  E  Y Y +G      C      + A ++    +  DED++AA L  NGPLA+A++A
Sbjct: 208 SVYTEASYSYVSGGGDSQTCDMSDHVVGAVISGHVDLPQDEDKMAAWLAVNGPLAIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y GGV    + S +LDHGV+LVGY  +          PYWIIKNSWG  WGE GY
Sbjct: 268 TSFMSYTGGVLTNCV-SDQLDHGVVLVGYNDS-------SNPPYWIIKNSWGADWGEEGY 319

Query: 351 YKICRGRNVCGV 362
            +I +G N C V
Sbjct: 320 IRIQKGTNQCLV 331


>gi|356564154|ref|XP_003550321.1| PREDICTED: cysteine proteinase RD21a-like [Glycine max]
          Length = 476

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/322 (40%), Positives = 177/322 (54%), Gaps = 28/322 (8%)

Query: 44  SHHESTNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DP 99
           S H      L   E   S++++   K  K Y +  E + RF IFK NLR    H    D 
Sbjct: 40  SAHADKAATLRTEEELMSMYEQWLVKHGKVYNALGEKEKRFQIFKDNLRFIDDHNSAEDR 99

Query: 100 SATHGITQFSDLTPAEFRRTYLGLR----RKLRLPKDADQAPILPTNDLPADFDWREKGA 155
           +   G+ +F+DLT  E+R  YLG +    R+L        AP +  + LP   DWR++GA
Sbjct: 100 TYKLGLNRFADLTNEEYRAKYLGTKIDPNRRLGKTPSNRYAPRV-GDKLPDSVDWRKEGA 158

Query: 156 VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGC 215
           V PVKDQG CGSCW+FS  GA+EG N + TG+L+SLSEQ+LVDCD           + GC
Sbjct: 159 VPPVKDQGGCGSCWAFSAIGAVEGINKIVTGELISLSEQELVDCDT--------GYNQGC 210

Query: 216 NGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIA 275
           NGGLM+ AFE+ +  GG+  +EDYPY G D G    + K+    S+ ++  V   ++   
Sbjct: 211 NGGLMDYAFEFIINNGGIDSDEDYPYRGVD-GRCDTYRKNAKVVSIDDYEDVPAYDELAL 269

Query: 276 ANLVKNGPLAVAIN--AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKP 333
              V N P++VAI       Q Y+ GV     C   LDHGV+ VGYG+A       K   
Sbjct: 270 KKAVANQPVSVAIEGGGREFQLYVSGVFTGR-CGTALDHGVVAVGYGTA-------KGHD 321

Query: 334 YWIIKNSWGESWGENGYYKICR 355
           YWI++NSWG SWGE+GY ++ R
Sbjct: 322 YWIVRNSWGSSWGEDGYIRLER 343


>gi|410923307|ref|XP_003975123.1| PREDICTED: cathepsin L1-like [Takifugu rubripes]
          Length = 336

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 135/322 (41%), Positives = 180/322 (55%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           + H++L+K   +K Y  +EE   R  +++ NL++   H        H    G+  F D+T
Sbjct: 25  DEHWNLWKDWHSKKYHEKEE-GWRRMVWEKNLKKIELHNLEHSMGKHTYSLGMNHFGDMT 83

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+   G   KL+  +    +  +  N L  P   DWR+KG V PVKDQG CGSCW+
Sbjct: 84  HEEFRQIMNGY--KLKSQRKLRGSLFMEPNFLEAPRSVDWRDKGYVTPVKDQGQCGSCWA 141

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTGA+EG +F  TG LVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    
Sbjct: 142 FSTTGAMEGQHFRKTGTLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDN 194

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
           GGL  EE YPY GTD G  C +D S  +A+   F  V S  E  +   +   GP++VAI+
Sbjct: 195 GGLDSEESYPYLGTDEG-PCHYDPSYNSANDTGFVDVPSGSERALMKAVASVGPVSVAID 253

Query: 290 AVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+     C S  LDHGVL+VGYG  G     +  K YWI+KNSW E+WG
Sbjct: 254 AGHESFQFYHSGIYYDKECSSEELDHGVLVVGYGFEG---KDVDGKKYWIVKNSWSENWG 310

Query: 347 ENGYYKICR-GRNVCGVDSMVS 367
           + GY  + +  +N CG+ +  S
Sbjct: 311 DKGYIYMAKDKKNHCGIATAAS 332


>gi|74149661|dbj|BAE36450.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 172/322 (53%), Gaps = 25/322 (7%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FS 109
             AE H   +K    + Y + EE + R  I++ N+R    H     +  HG +     F 
Sbjct: 25  FSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFG 81

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW
Sbjct: 82  DMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCW 139

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS +G LEG  FL TGKL+SLSEQ LVDC H          + GCNGGLM+ AF+Y  +
Sbjct: 140 AFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKE 192

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  EE YPY   D   +CK+      A+   F  +   E  +   +   GP++VA++
Sbjct: 193 NGGLDSEESYPYEAKDG--SCKYRAEFAVANGTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 290 AVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +  +Q Y  G+   P   S+ LDHGVLLVGYG  G    + K   YW++KNSWG  WG
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWG 307

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
             GY KI + R N CG+ +  S
Sbjct: 308 MEGYIKIAKDRDNHCGLATAAS 329


>gi|6753558|ref|NP_034114.1| cathepsin L1 preproprotein [Mus musculus]
 gi|115742|sp|P06797.2|CATL1_MOUSE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; AltName: Full=p39 cysteine proteinase;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|53047|emb|CAA29470.1| unnamed protein product [Mus musculus]
 gi|309186|gb|AAA37445.1| preprocysteine proteinase [Mus musculus]
 gi|12832050|dbj|BAB21945.1| unnamed protein product [Mus musculus]
 gi|26340196|dbj|BAC33761.1| unnamed protein product [Mus musculus]
 gi|45768760|gb|AAH68163.1| Cathepsin L [Mus musculus]
 gi|74139700|dbj|BAE31701.1| unnamed protein product [Mus musculus]
 gi|74146632|dbj|BAE41323.1| unnamed protein product [Mus musculus]
 gi|74151584|dbj|BAE41141.1| unnamed protein product [Mus musculus]
 gi|74185397|dbj|BAE30172.1| unnamed protein product [Mus musculus]
 gi|74197196|dbj|BAE35143.1| unnamed protein product [Mus musculus]
 gi|74203006|dbj|BAE26206.1| unnamed protein product [Mus musculus]
 gi|74219606|dbj|BAE29572.1| unnamed protein product [Mus musculus]
 gi|148684295|gb|EDL16242.1| cathepsin L [Mus musculus]
          Length = 334

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 172/322 (53%), Gaps = 25/322 (7%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FS 109
             AE H   +K    + Y + EE + R  I++ N+R    H     +  HG +     F 
Sbjct: 25  FSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFG 81

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW
Sbjct: 82  DMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCW 139

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS +G LEG  FL TGKL+SLSEQ LVDC H          + GCNGGLM+ AF+Y  +
Sbjct: 140 AFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKE 192

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  EE YPY   D   +CK+      A+   F  +   E  +   +   GP++VA++
Sbjct: 193 NGGLDSEESYPYEAKDG--SCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 290 AVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +  +Q Y  G+   P   S+ LDHGVLLVGYG  G    + K   YW++KNSWG  WG
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWG 307

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
             GY KI + R N CG+ +  S
Sbjct: 308 MEGYIKIAKDRDNHCGLATAAS 329


>gi|330805275|ref|XP_003290610.1| hypothetical protein DICPUDRAFT_98747 [Dictyostelium purpureum]
 gi|325079249|gb|EGC32858.1| hypothetical protein DICPUDRAFT_98747 [Dictyostelium purpureum]
          Length = 334

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/337 (37%), Positives = 186/337 (55%), Gaps = 30/337 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLF---KKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD 98
           ILS +     +L  A+ + + F    KK NKAY   E +D ++  FK N+         +
Sbjct: 13  ILSINVCAATNLFSAQTYQTSFLGWMKKHNKAYHHHEFND-KYQTFKDNMDFIHNWNSKE 71

Query: 99  PSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN----DLPADFDWREKG 154
                G+ +F+DLT  E+++TYLG+   + L   A+Q P+   N      P+  DWR+ G
Sbjct: 72  SDTVLGLNRFADLTNEEYKKTYLGMSINVNLR--ANQVPMNGLNFERFTGPSSIDWRQNG 129

Query: 155 AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 214
           AV  VKDQG CGSCW+F+TTGA+EGA+ + TG +V+ SEQ LVDC            ++G
Sbjct: 130 AVAYVKDQGHCGSCWAFATTGAVEGAHQIKTGNMVTFSEQHLVDCSGRYG-------NNG 182

Query: 215 CNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQI 274
           C+GGLM SAF+Y +   G+  EE YPYT T   + C ++ + +  +++ +  V    +  
Sbjct: 183 CDGGLMTSAFKYIIDNDGIATEEAYPYTATQ--NRCVYNTTMLGTAISGYKDVPRGSESA 240

Query: 275 AANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKE 331
               +   P+AVAI+A  +  Q Y  GV     CS  RL+HGVL VGYG+       L+ 
Sbjct: 241 LTAAISKQPVAVAIDASPITFQLYKSGVYQEATCSSYRLNHGVLAVGYGT-------LEG 293

Query: 332 KPYWIIKNSWGESWGENGYYKICR-GRNVCGVDSMVS 367
           K Y+I+KNSW E+WG  GY  + R   N CG+ +M S
Sbjct: 294 KDYYIVKNSWAETWGNQGYILMARNANNHCGIATMAS 330


>gi|297802418|ref|XP_002869093.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314929|gb|EFH45352.1| hypothetical protein ARALYDRAFT_491113 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 355

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 177/331 (53%), Gaps = 30/331 (9%)

Query: 49  TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI 105
           T   L   E    LF+    + +K Y S EE  HRF +F+ NL    +      S   G+
Sbjct: 37  TPEQLTSTEKLLELFESWMSEHSKVYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGL 96

Query: 106 TQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQG 163
            +F+DLT  EF+  YLGL +     K    A        DLP   DWR+KGAV PVKDQG
Sbjct: 97  NEFADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQG 156

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCW+FST  A+EG N + TG L SLSEQ+L+DCD         + +SGCNGGLM+ A
Sbjct: 157 QCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDT--------TFNSGCNGGLMDYA 208

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIA-ASVANFSVVSLDEDQIAANLVKNG 282
           F+Y +  GGL +E+DYPY   +    C+  K  +   +++ +  V  ++D+     + + 
Sbjct: 209 FQYIISTGGLHKEDDYPYLMEE--GICQEQKEDVERVTISGYEDVPENDDESLVKALAHQ 266

Query: 283 PLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           P++VAI A     Q Y GGV     C   LDHGV  VGYGS+       K   Y I+KNS
Sbjct: 267 PVSVAIEASGRDFQFYKGGVFNGQ-CGTDLDHGVAAVGYGSS-------KGSDYVIVKNS 318

Query: 341 WGESWGENGYYKICRG----RNVCGVDSMVS 367
           WG  WGE G+ ++ R       +CG++ M S
Sbjct: 319 WGPRWGEKGFIRMKRNTGKPEGLCGINKMAS 349


>gi|89272015|emb|CAJ83143.1| cathepsin L2 [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  214 bits (546), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 179/320 (55%), Gaps = 23/320 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           ++H++L+K    K+YA +EE   R  +++ NLR    H        H    G+ QF D+T
Sbjct: 26  DNHWNLWKNWHKKSYAPKEE-GWRRVLWEKNLRMIEFHNLEHSLGKHSHSLGMNQFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR+   G + + ++      AP     + P   DWR+KG V PVKDQG CGSCW+FS
Sbjct: 85  NEEFRQLMNGYKNQKKIRGSTFLAP--NNFESPKSVDWRKKGYVTPVKDQGQCGSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGALEG ++  TGK++SLSEQ LVDC            + GCNGGLM+ AF+Y    GG
Sbjct: 143 TTGALEGQHYRNTGKMISLSEQNLVDCSR-------AQGNQGCNGGLMDQAFQYVKDNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAV 291
           +  E+ YPYT  D    C +D +  +A+   F  V+ + ++   N V + GP++VA++A 
Sbjct: 196 IDSEDSYPYTAKDD-QECHYDPNYNSANDTGFVDVTSESEKDLMNAVASVGPVSVAVDAG 254

Query: 292 Y--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  G+   P   S  LDHGVL+VGYG  G        K YWI+KNSW E WG +
Sbjct: 255 HQSFQFYKSGIYYEPECSSEDLDHGVLVVGYGFEGEDE---DGKKYWIVKNSWSEKWGND 311

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  I + R N CG+ +  S
Sbjct: 312 GYIYIAKDRHNHCGIATAAS 331


>gi|18418684|ref|NP_567983.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana]
 gi|71153408|sp|O65493.1|XCP1_ARATH RecName: Full=Xylem cysteine proteinase 1; Short=AtXCP1; Flags:
           Precursor
 gi|6708181|gb|AAF25831.1|AF191027_1 papain-type cysteine endopeptidase XCP1 [Arabidopsis thaliana]
 gi|3080415|emb|CAA18734.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|7270487|emb|CAB80252.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|26449881|dbj|BAC42063.1| putative cysteine proteinase [Arabidopsis thaliana]
 gi|28827736|gb|AAO50712.1| unknown protein [Arabidopsis thaliana]
 gi|332661101|gb|AEE86501.1| Xylem cysteine proteinase 1 [Arabidopsis thaliana]
          Length = 355

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 174/317 (54%), Gaps = 27/317 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  + +KAY S EE  HRF +F+ NL    +      S   G+ +F+DLT  EF+  
Sbjct: 51  FESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGR 110

Query: 120 YLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           YLGL +     K    A        DLP   DWR+KGAV PVKDQG CGSCW+FST  A+
Sbjct: 111 YLGLAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAV 170

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG N + TG L SLSEQ+L+DCD         + +SGCNGGLM+ AF+Y +  GGL +E+
Sbjct: 171 EGINQITTGNLSSLSEQELIDCDT--------TFNSGCNGGLMDYAFQYIISTGGLHKED 222

Query: 238 DYPYTGTDRGHACKFDKSKIA-ASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQ 294
           DYPY   +    C+  K  +   +++ +  V  ++D+     + + P++VAI A     Q
Sbjct: 223 DYPYLMEE--GICQEQKEDVERVTISGYEDVPENDDESLVKALAHQPVSVAIEASGRDFQ 280

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y GGV     C   LDHGV  VGYGS+       K   Y I+KNSWG  WGE G+ ++ 
Sbjct: 281 FYKGGVFNGK-CGTDLDHGVAAVGYGSS-------KGSDYVIVKNSWGPRWGEKGFIRMK 332

Query: 355 RG----RNVCGVDSMVS 367
           R       +CG++ M S
Sbjct: 333 RNTGKPEGLCGINKMAS 349


>gi|126021|sp|P25775.1|LMCPA_LEIME RecName: Full=Cysteine proteinase A; Flags: Precursor
 gi|9573|emb|CAA44094.1| cysteine proteinase [Leishmania mexicana]
          Length = 354

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/367 (35%), Positives = 188/367 (51%), Gaps = 44/367 (11%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M  +  +LF + + +   V  G+       LI Q     D  +            A  H+
Sbjct: 1   MARRNPLLFAIVVTILFVVCYGS------ALIAQTPPPVDNFV------------ASAHY 42

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSDLTPAEFRRT 119
             FKK+  KA+    E  HRF  FK N++ A      +P A + ++ +F+DLTP EF + 
Sbjct: 43  GSFKKRHGKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKL 102

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPA---DFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           YL      R  K+  +  +   +  P+     DWR+KGAV PVK+QG CGSCW+FS  G 
Sbjct: 103 YLNPDYYARHLKNHKED-VHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGN 161

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLM 234
           +EG    +   LVSLSEQ LV CD         + D GCNGGLM+ A  + +++  G + 
Sbjct: 162 IEGQWAASGHSLVSLSEQMLVSCD---------NIDEGCNGGLMDQAMNWIMQSHNGSVF 212

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            E  YPYT          D+ ++ A +  F  +  DE++IA  + K GP+AVA++A   Q
Sbjct: 213 TEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQ 272

Query: 295 TYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y GGV    +C +  L+HGVL+VG+        +  + PYWI+KNSWG SWGE GY ++
Sbjct: 273 LYFGGVVS--LCLAWSLNHGVLIVGFN-------KNAKPPYWIVKNSWGSSWGEKGYIRL 323

Query: 354 CRGRNVC 360
             G N C
Sbjct: 324 AMGSNQC 330


>gi|74200292|dbj|BAE22939.1| unnamed protein product [Mus musculus]
          Length = 308

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 172/320 (53%), Gaps = 25/320 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDL 111
           AE H   +K    + Y + EE + R  I++ N+R    H     +  HG +     F D+
Sbjct: 1   AEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDM 57

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW+F
Sbjct: 58  TNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCWAF 115

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S +G LEG  FL TGKL+SLSEQ LVDC H          + GCNGGLM+ AF+Y  + G
Sbjct: 116 SASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKENG 168

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  EE YPY   D   +CK+      A+   F  +   E  +   +   GP++VA++A 
Sbjct: 169 GLDSEESYPYEAKDG--SCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMDAS 226

Query: 292 Y--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +  +Q Y  G+   P   S+ LDHGVLLVGYG  G    + K   YW++KNSWG  WG  
Sbjct: 227 HPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWGME 283

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY KI + R N CG+ +  S
Sbjct: 284 GYIKIAKDRDNHCGLATAAS 303


>gi|15824691|gb|AAL09443.1| cysteine protease [Leishmania donovani]
          Length = 443

 Score =  214 bits (546), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/311 (41%), Positives = 169/311 (54%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E         LVSLSEQQLV CD +         D+GCNGGLM  AFE+ L+   G +
Sbjct: 158 NIESQWARVGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYGIV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKI--AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPYT  +   A   + SK+   A +  + ++  +E  +AA L +NGP+A+A++A 
Sbjct: 209 FTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC       L+HGVLLVGY   G         PYW+IKNSWGE WGE G
Sbjct: 269 SFMSYQSGVLTSCA---GDALNHGVLLVGYNKTGGV-------PYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G+N C
Sbjct: 319 YVRVAMGKNAC 329


>gi|357467173|ref|XP_003603871.1| Cysteine proteinase [Medicago truncatula]
 gi|355492919|gb|AES74122.1| Cysteine proteinase [Medicago truncatula]
 gi|388499154|gb|AFK37643.1| unknown [Medicago truncatula]
          Length = 350

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 127/329 (38%), Positives = 182/329 (55%), Gaps = 27/329 (8%)

Query: 49  TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI 105
           ++ DL   +    LF+    +  K Y + EE   RF +FK NL+      K+  +   G+
Sbjct: 33  SSEDLKSMDKLIELFESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDDRNKVVSNYWLGL 92

Query: 106 TQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGS 164
            +F+DL+  EF+  YLGL+  L   +++ +      + DLP   DWR+KGAV PVK+QG 
Sbjct: 93  NEFADLSHQEFKNKYLGLKVDLSQRRESSEEEFTYRDVDLPKSVDWRKKGAVTPVKNQGQ 152

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCW+FST  A+EG N + TG L SLSEQ+L+DCD         + ++GCNGGLM+ AF
Sbjct: 153 CGSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDT--------TYNNGCNGGLMDYAF 204

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 284
            + +K GGL +EEDYPY   +     K + S++  ++  +  V  + +Q     + N PL
Sbjct: 205 SFIVKNGGLHKEEDYPYIMEESTCEMKKEVSEV-VTINGYHDVPQNNEQSLLKALANQPL 263

Query: 285 AVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           +VAI A     Q Y GGV   + C   LDHGV  VGYG++       K   Y I+KNSWG
Sbjct: 264 SVAIEASGRDFQFYSGGVFDGH-CGSELDHGVSAVGYGTS-------KGLDYIIVKNSWG 315

Query: 343 ESWGENGYYKICRG----RNVCGVDSMVS 367
             WGE G+ ++ R       +CG+  M S
Sbjct: 316 AKWGEKGFIRMKRNIGKSEGICGLYKMAS 344


>gi|109939734|sp|P25776.2|ORYA_ORYSJ RecName: Full=Oryzain alpha chain; Flags: Precursor
 gi|78192122|gb|ABB30151.1| oryzain alpha [Oryza sativa Japonica Group]
          Length = 458

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/321 (38%), Positives = 177/321 (55%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  +   A   ++ +K +  K+Y +  E + R+  F+ NLR    H     + 
Sbjct: 25  IVSYGERSEEE---ARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 81

Query: 102 TH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLGLR K R  +      +   N+ LP   DWR KGAV
Sbjct: 82  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 141

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             +KDQG CGSCW+FS   A+EG N + TG L+SLSEQ+LVDCD         S + GCN
Sbjct: 142 AEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCN 193

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AF++ +  GG+  E+DYPY G D         +K+  ++ ++  V+ + +    
Sbjct: 194 GGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKV-VTIDSYEDVTPNSETSLQ 252

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K Y
Sbjct: 253 KAVANQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGTE-------NGKDY 304

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI++NSWG+SWGE+GY ++ R
Sbjct: 305 WIVRNSWGKSWGESGYVRMER 325


>gi|30142040|gb|AAN34825.1| cysteine proteinase [Leishmania amazonensis]
 gi|30142042|gb|AAN34826.1| cysteine proteinase [Leishmania amazonensis]
 gi|30142572|gb|AAP21894.1| cysteine proteinase [Leishmania amazonensis]
          Length = 354

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/367 (35%), Positives = 188/367 (51%), Gaps = 44/367 (11%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M  +  +LF + + +   V  G+       LI Q     D  +            A  H+
Sbjct: 1   MARRNPLLFAIVVTILFVVCYGS------ALIAQTPPAVDNFV------------ASAHY 42

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSDLTPAEFRRT 119
             FKK+ +KA+    E  HRF  FK N++ A      +P A + ++ +F+DLTP EF + 
Sbjct: 43  GSFKKRHSKAFGGDAEEGHRFNAFKQNMQTAYFLNTQNPHAHYDVSGKFADLTPQEFAKL 102

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPA---DFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           YL         KD  +  +   +  P+     DWR+KGAV PVK+QG CGSCW+FS  G 
Sbjct: 103 YLNPDYYTSHLKDHKED-VHVDDSAPSGVMSVDWRDKGAVTPVKNQGLCGSCWAFSAIGN 161

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLM 234
           +EG    +   LVSLSEQ LV CD         + D GCNGGLM+ A  + +++  G + 
Sbjct: 162 IEGQWAASGHSLVSLSEQMLVSCD---------NVDEGCNGGLMDQAMNWIMQSHNGSVF 212

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
            E  YPYT          D+ ++ A +  F  +  DE++IA  + K GP+AVA++A   Q
Sbjct: 213 TEASYPYTSGGGTRPPCHDEGEVGAKITGFLSLPHDEERIADWVEKRGPVAVAVDATTWQ 272

Query: 295 TYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y GGV    +C +  L+HGVL+VG+        +  + PYWI+KNSWG SWGE GY ++
Sbjct: 273 LYFGGVVS--LCLAWSLNHGVLIVGFN-------KNAKPPYWIVKNSWGSSWGEKGYIRL 323

Query: 354 CRGRNVC 360
             G N C
Sbjct: 324 AMGSNQC 330


>gi|50355623|dbj|BAD29960.1| cysteine protease [Daucus carota]
          Length = 460

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/331 (38%), Positives = 183/331 (55%), Gaps = 29/331 (8%)

Query: 44  SHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKAN-LRRAARHQKLDPSAT 102
           +H   + +D++ A +   L K    K+Y +  E + RF IFK N L    ++   D S  
Sbjct: 30  THAVGSTDDVIMAAYESWLVKH--GKSYNALGEKEQRFQIFKDNFLYIDEQNAAKDRSFK 87

Query: 103 HGITQFSDLTPAEFRRTYLGLRRK---LRLPKDADQAPILPTNDLPADFDWREKGAVGPV 159
            G+ +F+DLT  E+R  Y G+R K    ++   + +   L    LP   DWRE GAV  V
Sbjct: 88  LGLNRFADLTNEEYRSKYTGIRTKDSRKKVSGKSQRYASLAGESLPESVDWREHGAVASV 147

Query: 160 KDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           KDQG CGSCW+FST  A+EG N +ATGKL++LSEQ+LVDCD         S + GCNGGL
Sbjct: 148 KDQGQCGSCWAFSTISAVEGINQIATGKLITLSEQELVDCDR--------SYNEGCNGGL 199

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV 279
           M+ AF++ +  GG+  + DYPYTG D G   ++ K+    ++ ++  V   +++      
Sbjct: 200 MDDAFQFIINNGGIDSDADYPYTGRD-GQCDQYRKNAKVVTIDSYEDVPEYDEKALQKAA 258

Query: 280 KNGPLAVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWII 337
            N P++VAI A     Q Y  G+     C   LDHGV++VGYG+          K YWI+
Sbjct: 259 ANQPISVAIEASGRDFQFYDSGIFTG-KCGTDLDHGVVVVGYGTE-------NGKDYWIV 310

Query: 338 KNSWGESWGENGYYKICRG----RNVCGVDS 364
           +NSWG  WGE GY ++ RG      +CG+ S
Sbjct: 311 RNSWGADWGEKGYLRMERGISSKAGICGITS 341


>gi|6978723|ref|NP_037288.1| cathepsin L1 preproprotein [Rattus norvegicus]
 gi|55888|emb|CAA68691.1| prepro-cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/313 (39%), Positives = 172/313 (54%), Gaps = 23/313 (7%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRR 118
           +K    + Y + EE + R  +++ N+R    H     +  HG T     F D+T  EFR+
Sbjct: 32  WKSTHRRLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQ 90

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
              G R +        Q P++    +P   DWREKG V PVK+QG CGSCW+FS +G LE
Sbjct: 91  IVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLE 148

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G  FL TGKL+SLSEQ LVDC H+         + GCNGGLM+ AF+Y  + GGL  EE 
Sbjct: 149 GQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQYIKENGGLDSEES 201

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           YPY   D   +CK+      A+   F  +   E  +   +   GP++VA++A +  +Q Y
Sbjct: 202 YPYEAKDG--SCKYRAEYAVANDTGFVDIPQQEKALMKPVATVGPISVAMDASHPSLQFY 259

Query: 297 IGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
             G+   P   S+ LDHGVL+VGYG  G    + K   YW++KNSWG+ WG +GY KI +
Sbjct: 260 SSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDK---YWLVKNSWGKEWGMDGYIKIAK 316

Query: 356 GRNV-CGVDSMVS 367
            RN  CG+ +  S
Sbjct: 317 DRNNHCGLATAAS 329


>gi|115743|sp|P07154.2|CATL1_RAT RecName: Full=Cathepsin L1; AltName: Full=Cyclic protein 2;
           Short=CP-2; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Procathepsin L;
           Contains: RecName: Full=Cathepsin L1 heavy chain;
           Contains: RecName: Full=Cathepsin L1 light chain; Flags:
           Precursor
 gi|38648869|gb|AAH63175.1| Cathepsin L1 [Rattus norvegicus]
 gi|149029152|gb|EDL84437.1| cathepsin L, isoform CRA_a [Rattus norvegicus]
 gi|386267881|dbj|BAM14518.1| cathepsin L [Rattus norvegicus]
          Length = 334

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/313 (39%), Positives = 172/313 (54%), Gaps = 23/313 (7%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRR 118
           +K    + Y + EE + R  +++ N+R    H     +  HG T     F D+T  EFR+
Sbjct: 32  WKSTHRRLYGTNEE-EWRRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQ 90

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
              G R +        Q P++    +P   DWREKG V PVK+QG CGSCW+FS +G LE
Sbjct: 91  IVNGYRHQKHKKGRLFQEPLML--QIPKTVDWREKGCVTPVKNQGQCGSCWAFSASGCLE 148

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G  FL TGKL+SLSEQ LVDC H+         + GCNGGLM+ AF+Y  + GGL  EE 
Sbjct: 149 GQMFLKTGKLISLSEQNLVDCSHD-------QGNQGCNGGLMDFAFQYIKENGGLDSEES 201

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           YPY   D   +CK+      A+   F  +   E  +   +   GP++VA++A +  +Q Y
Sbjct: 202 YPYEAKDG--SCKYRAEYAVANDTGFVDIPQQEKALMKAVATVGPISVAMDASHPSLQFY 259

Query: 297 IGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
             G+   P   S+ LDHGVL+VGYG  G    + K   YW++KNSWG+ WG +GY KI +
Sbjct: 260 SSGIYYEPNCSSKDLDHGVLVVGYGYEGTDSNKDK---YWLVKNSWGKEWGMDGYIKIAK 316

Query: 356 GRNV-CGVDSMVS 367
            RN  CG+ +  S
Sbjct: 317 DRNNHCGLATAAS 329


>gi|339896953|ref|XP_003392238.1| cathepsin L-like protease [Leishmania infantum JPCM5]
 gi|14349351|gb|AAC38832.2| cysteine protease [Leishmania chagasi]
 gi|17384031|emb|CAD12393.1| cysteine proteinase [Leishmania infantum]
 gi|321398984|emb|CBZ08377.1| cathepsin L-like protease [Leishmania infantum JPCM5]
          Length = 443

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 169/311 (54%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E     A   LVSLSEQQLV CD +         D+GCNGGLM  AFE+ L+   G +
Sbjct: 158 NIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYGIV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKI--AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPYT  +   A   + SK+   A +  + ++  +E  +AA L +NGP+A+A++A 
Sbjct: 209 FTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC       L+HGVLLVGY   G         PYW+IKNSWGE WGE G
Sbjct: 269 SFMSYQSGVLTSCA---GDALNHGVLLVGYNKTGGV-------PYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVVMGLNAC 329


>gi|332374900|gb|AEE62591.1| unknown [Dendroctonus ponderosae]
          Length = 359

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/314 (37%), Positives = 170/314 (54%), Gaps = 24/314 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDL 111
           A   F  F++K+ K Y +  E   R  IFK NL +   H K       S   G+ QFSDL
Sbjct: 20  ATETFVTFQQKYGKVYQNDSELSVREEIFKENLAKIEEHNKQFQQNLVSYELGLNQFSDL 79

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQA-PILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           T AEF+          +L K  ++          P   +W EKG V PVK+QG+CGSCW+
Sbjct: 80  TEAEFQALLTMSPLTDQLTKQMEKYNSEFDIKTAPVSVNWAEKGVVTPVKNQGNCGSCWT 139

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           F+TTG +E    L TG LVSLSEQQL+DC+           ++GC+GG+++ A +Y +++
Sbjct: 140 FTTTGTIESRLALKTGSLVSLSEQQLLDCNR---------VNAGCDGGVLSYALQY-VES 189

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
            GL  E++YPY   +    C      +AA    ++++    +      V  GP+AVA+NA
Sbjct: 190 AGLTTEDEYPYKAWN--GTCNSTHKPVAAYTKGYTLIYTRSESDLMKAVAEGPVAVALNA 247

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             +Q Y  G+  P  CS  ++HG L+VGY             PYWIIKNSWG +WGENGY
Sbjct: 248 DLLQYYSKGIFNPSACSSTVNHGGLVVGYEENA-------TLPYWIIKNSWGATWGENGY 300

Query: 351 YKICRGRNVCGVDS 364
           +++ +G N+CG+ S
Sbjct: 301 FRMAKGYNLCGITS 314


>gi|42564163|gb|AAS20593.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 324

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/326 (39%), Positives = 179/326 (54%), Gaps = 30/326 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH-QKLD---PSATHGITQ 107
           + L  +  +  FK  F+K+Y +  E   RF IF +NL R   H Q       +   G+ +
Sbjct: 15  EALSDKEKWQNFKINFSKSYQNVVEEKRRFNIFLSNLLRIEEHNQNFSRGLSTYEMGVNK 74

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGS 167
           F+DLTP EF   +  LR K +    ++QA      DLPA+ DW ++GAV  VK QGSCGS
Sbjct: 75  FADLTPEEFMERFRPLR-KTKPKFLSEQAKFNFDGDLPAEVDWTKQGAVTEVKSQGSCGS 133

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CW+FSTTG++E  NF+ TGKL+SLSEQQLVDC            +SGC GG M+ A EY 
Sbjct: 134 CWAFSTTGSVESHNFIKTGKLISLSEQQLVDCVKN---------NSGCAGGWMDIALEY- 183

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAV 286
           ++A G+M E+DYPY   +R   C+F+ SK A  + ++  +   DE  +   +   GP++V
Sbjct: 184 IEADGIMSEDDYPY--EERNTTCRFNNSKAAVQIKSYKAIKKNDEIDLQKAVALEGPVSV 241

Query: 287 AIN-AVYMQTYIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           AI   +  Q Y  G+     C      L H VL+ GYGS          K YWI+KNSWG
Sbjct: 242 AIEVTIAFQLYARGILNDPQCKNTEGDLTHAVLVTGYGSQ-------DGKDYWIVKNSWG 294

Query: 343 ESWGENGYYKICR-GRNVCGVDSMVS 367
             +G +GY ++ R   N CG+ +  S
Sbjct: 295 AEYGMDGYLRMSRNADNQCGIATRAS 320


>gi|1749812|emb|CAA90237.1| cysteine proteinase LmCPB1 [Leishmania mexicana]
          Length = 359

 Score =  214 bits (545), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 168/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFCAR 97

Query: 120 YLG-----LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           YL         K   P+   +A     + +P   DWREKGAV PVKDQG+CGSCW+FS  
Sbjct: 98  YLNGAAYFAAAKRHTPQHYPKARA-DLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAV 156

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGG 232
           G +EG  +LA  +LVSLSEQQLV CD   D         GC+GGLM  AF++ L+   G 
Sbjct: 157 GNIEGQWYLAGHELVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGH 207

Query: 233 LMREEDYPY-TGTDRGHAC-KFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           L  E+ YPY +G      C    K  + A +    ++   E  +AA L KNGP+A+A++A
Sbjct: 208 LYTEDSYPYVSGNGYLPECSNSSKLVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I  ++++H VLLVGY   G       E PYW+IKNSWG  WGE GY
Sbjct: 268 SSFMSYKSGVLTACI-GKQVNHAVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVVMGVNAC 329


>gi|222629675|gb|EEE61807.1| hypothetical protein OsJ_16426 [Oryza sativa Japonica Group]
          Length = 459

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/321 (38%), Positives = 177/321 (55%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  +   A   ++ +K +  K+Y +  E + R+  F+ NLR    H     + 
Sbjct: 26  IVSYGERSEEE---ARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 82

Query: 102 TH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLGLR K R  +      +   N+ LP   DWR KGAV
Sbjct: 83  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 142

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             +KDQG CGSCW+FS   A+EG N + TG L+SLSEQ+LVDCD         S + GCN
Sbjct: 143 AEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCN 194

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AF++ +  GG+  E+DYPY G D         +K+  ++ ++  V+ + +    
Sbjct: 195 GGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKV-VTIDSYEDVTPNSETSLQ 253

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K Y
Sbjct: 254 KAVANQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGTE-------NGKDY 305

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI++NSWG+SWGE+GY ++ R
Sbjct: 306 WIVRNSWGKSWGESGYVRMER 326


>gi|224081756|ref|XP_002306486.1| predicted protein [Populus trichocarpa]
 gi|222855935|gb|EEE93482.1| predicted protein [Populus trichocarpa]
          Length = 352

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 126/303 (41%), Positives = 168/303 (55%), Gaps = 24/303 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           +  +  K  KAY    E   RF IFK NLR    H   + +   G+T+F+DLT  E+R  
Sbjct: 4   YKWWLAKHGKAYNGLGEEAERFEIFKNNLRFIDEHNSQNHTYKVGLTKFADLTNEEYRAM 63

Query: 120 YLGLR----RKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           +LG R    R+L   K   +       D LP   DWR KGAV P+KDQGSCGSCW+FST 
Sbjct: 64  FLGTRSDAKRRLMKSKSPSERYAFKAGDKLPESVDWRAKGAVNPIKDQGSCGSCWAFSTV 123

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
            A+EG N + TG+L+SLSEQ+LVDCD         + ++GCNGGLM+ AF++ +  GGL 
Sbjct: 124 AAVEGINQIVTGELISLSEQELVDCDR--------TYNAGCNGGLMDYAFQFIINNGGLD 175

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VY 292
            E+DYPY G D     K      A S+  F  V   +++     V + P++VAI A  + 
Sbjct: 176 TEKDYPYVGDDD-KCDKDKMKTKAVSIDGFEDVLPYDEKALQKAVAHQPVSVAIEASGMA 234

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           +Q Y  GV     C   LDHGV++VGY S            YW+++NSWG  WGE+GY K
Sbjct: 235 LQFYQSGVFTGE-CGTALDHGVVVVGYASE-------NGLDYWLVRNSWGTEWGEHGYIK 286

Query: 353 ICR 355
           + R
Sbjct: 287 MQR 289


>gi|50355619|dbj|BAD29958.1| cysteine protease [Daucus carota]
          Length = 496

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/304 (40%), Positives = 171/304 (56%), Gaps = 27/304 (8%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRRTYLGLRRK- 126
           K+Y +  E + RF IFK NLR       + D     G+ +F+DLT  E+R  Y G++ K 
Sbjct: 54  KSYNALGEEEKRFQIFKNNLRYIDEQNLVEDRGFKLGLNKFADLTNEEYRSKYTGIKSKD 113

Query: 127 --LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
              ++   + +   L    LP   DWRE GAV  VKDQGSCGSCW+FST  A+EG N +A
Sbjct: 114 LRKKVSAKSGRYATLSGESLPESVDWRESGAVATVKDQGSCGSCWAFSTISAVEGINQIA 173

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TGKL++LSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  + DYPYTG 
Sbjct: 174 TGKLITLSEQELVDCDR--------SYNEGCNGGLMDYAFEFIINNGGIDTDVDYPYTGR 225

Query: 245 DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSC 302
           D G   ++ K+    ++ ++  V   ++        N P++VAI A     Q Y  G+  
Sbjct: 226 D-GKCDQYRKNAKVVTIDSYEDVPAYDELALKKAAANQPISVAIEASGRDFQFYDSGIFT 284

Query: 303 PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG----RN 358
              C   LDHGV++VGYG+          K YWI++NSWG  WGENGY ++ RG      
Sbjct: 285 G-KCGIALDHGVVVVGYGTE-------NGKDYWIVRNSWGADWGENGYLRMERGISSKTG 336

Query: 359 VCGV 362
           +CG+
Sbjct: 337 ICGI 340


>gi|195124431|ref|XP_002006696.1| GI21205 [Drosophila mojavensis]
 gi|193911764|gb|EDW10631.1| GI21205 [Drosophila mojavensis]
          Length = 339

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 132/332 (39%), Positives = 185/332 (55%), Gaps = 33/332 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQ 107
           D++  E H   FK +  K Y  + E   R  IF  N  + A+H +     + +    + +
Sbjct: 21  DVIKEEWH--TFKLEHRKTYQDETEERFRLKIFNENKHKIAKHNQRYATGEVTFKMAVNK 78

Query: 108 FSDLTPAEFRRTYLG----LRRKLRL--PKDADQAPILPTN-DLPADFDWREKGAVGPVK 160
           ++D+   EFR T  G    L ++LR   P       I P +  LP   DWREKGAV  VK
Sbjct: 79  YADMLHHEFRETMNGFNYTLHKELRASDPSFTGITFISPAHVKLPKSVDWREKGAVTAVK 138

Query: 161 DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
           DQG CGSCW+FS+TGALEG +F  TG LVSLSEQ LVDC  +         ++GCNGGLM
Sbjct: 139 DQGHCGSCWAFSSTGALEGQHFRKTGTLVSLSEQNLVDCSAKYG-------NNGCNGGLM 191

Query: 221 NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLV 279
           ++AF Y    GG+  E+ YPY G D   +C F+K  + A+   F+ +   +E ++A  + 
Sbjct: 192 DNAFRYIKDNGGIDTEKSYPYEGIDD--SCHFNKDSVGATDRGFADIPQGNEKKMAEAVA 249

Query: 280 KNGPLAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
             GP++VAI+A +   Q Y  G+ + P   S+ LDHGVL+VGYG+          K YW+
Sbjct: 250 TIGPVSVAIDASHESFQFYSEGIYNEPECNSQNLDHGVLVVGYGTDESG------KDYWL 303

Query: 337 IKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           +KNSWG +WG+ G+ K+ R   N CG+ S  S
Sbjct: 304 VKNSWGTTWGDKGFIKMARNEDNQCGIASASS 335


>gi|356517184|ref|XP_003527269.1| PREDICTED: xylem cysteine proteinase 2-like [Glycine max]
          Length = 350

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/329 (38%), Positives = 179/329 (54%), Gaps = 28/329 (8%)

Query: 49  TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI 105
           ++ DL   +    LF+    +  K Y S EE  HRF IFK NL+      K+  +   G+
Sbjct: 34  SSEDLKSMDKLIELFESWISRHGKIYQSIEEKLHRFEIFKDNLKHIDERNKVVSNYWLGL 93

Query: 106 TQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSC 165
            +F+DL+  EF+  YLGL+      +++ +       +LP   DWR+KGAV  VK+QGSC
Sbjct: 94  NEFADLSHQEFKNKYLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVTQVKNQGSC 153

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           GSCW+FST  A+EG N + TG L SLSEQ+L+DCD         + ++GCNGGLM+ AF 
Sbjct: 154 GSCWAFSTVAAVEGINQIVTGNLTSLSEQELIDCDR--------TYNNGCNGGLMDYAFS 205

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPL 284
           + ++  GL +EEDYPY   +    C+  K +    +++ +  V  + +Q     + N PL
Sbjct: 206 FIVENDGLHKEEDYPYIMEE--GTCEMAKEETEVVTISGYHDVPQNNEQSLLKALANQPL 263

Query: 285 AVAINAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           +VAI A     Q Y GGV   + C   LDHGV  VGYG+A       K   Y  +KNSWG
Sbjct: 264 SVAIEASGRDFQFYSGGVFDGH-CGSDLDHGVAAVGYGTA-------KGVDYITVKNSWG 315

Query: 343 ESWGENGYYKICRG----RNVCGVDSMVS 367
             WGE GY ++ R       +CG+  M S
Sbjct: 316 SKWGEKGYIRMRRNIGKPEGICGIYKMAS 344


>gi|390457768|ref|XP_002742793.2| PREDICTED: cathepsin L2 [Callithrix jacchus]
          Length = 588

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/313 (39%), Positives = 167/313 (53%), Gaps = 23/313 (7%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRR 118
           +K    + Y + EE   R  +++ N++    H        HG T     F D+T  EFR+
Sbjct: 32  WKATHRRLYGTNEE-GWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQ 90

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
             +  R +    +   + P+L   +LP   DWR+KG V PVK+Q  CGSCW+FS TGALE
Sbjct: 91  VMVCFRNQKHKNRKVFRGPLL--LNLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALE 148

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G  F  TGKLVSLSEQ LVDC H          + GCNGG MN+AF+Y  + GGL  E  
Sbjct: 149 GQMFRKTGKLVSLSEQNLVDCSHP-------QGNQGCNGGFMNNAFQYVKENGGLDSEAS 201

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           YPY   D   +CK+      A+   F V+   E ++   +   GP++VA++A +   Q Y
Sbjct: 202 YPYVAKD--GSCKYKPENSVANDTGFVVIPAHEKELMKAVATVGPISVAVDASHSSFQFY 259

Query: 297 IGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
             G+     C S+ LDHGVL+VGYG  G          YW+IKNSWG  WG NGY KI +
Sbjct: 260 KSGIYFEQDCSSKNLDHGVLVVGYGFEG---TNSNNNNYWLIKNSWGPEWGSNGYIKIAK 316

Query: 356 GRNV-CGVDSMVS 367
            RN  CG+ +  S
Sbjct: 317 DRNNHCGIATAAS 329


>gi|60100207|gb|AAX13273.1| putative cysteine protease [Oryza sativa Japonica Group]
          Length = 349

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/318 (42%), Positives = 174/318 (54%), Gaps = 34/318 (10%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI-----TQFSDLTPAEFRRTY 120
           K  +AYA   E   R  +F+ N+   A  + ++ +A+         QF+DLT AEFR T 
Sbjct: 46  KHGRAYADDAEKARRLEVFRDNV---AFIESVNAAASQHKFWLEENQFADLTNAEFRATR 102

Query: 121 LGLR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
            GLR    R  R P     A +  T DLPA  DWR KGAV PVKDQG CG CW+FS   A
Sbjct: 103 TGLRPSSSRGNRAPTSFRYANV-STGDLPASVDWRGKGAVNPVKDQGDCGCCWAFSAVAA 161

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EGA  LATGKLVSLSEQQLV CD + +       D GC GGLM+ AF++ +K GGL  E
Sbjct: 162 MEGAVKLATGKLVSLSEQQLVSCDVKGE-------DQGCEGGLMDDAFDFIIKNGGLAAE 214

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQ 294
            DYPYT +D            AA++  +  V  +++      V N P++VAI+    + Q
Sbjct: 215 SDYPYTASDD-KCATAGAGAAAATIKGYEDVPANDEAALLKAVANQPVSVAIDGGDRHFQ 273

Query: 295 TYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y GGV S    C+  LDH +  VGYG A           YW++KNSWG SWGE+GY ++
Sbjct: 274 FYKGGVLSGAAGCATELDHAITAVGYGVAS------DGTKYWLMKNSWGTSWGEDGYVRM 327

Query: 354 CRG----RNVCGVDSMVS 367
            RG      VCG+  M S
Sbjct: 328 ERGVADKEGVCGLAMMAS 345


>gi|194352750|emb|CAQ00103.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326514262|dbj|BAJ92281.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519402|dbj|BAJ96700.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326524351|dbj|BAK00559.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326531998|dbj|BAK01375.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 356

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/332 (40%), Positives = 184/332 (55%), Gaps = 29/332 (8%)

Query: 49  TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI 105
           +  DL   E    LF+K   K  KAYAS EE  HRF +FK NL+   +  +   S   G+
Sbjct: 35  SEEDLSSNERLVELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKHIDKINREVTSYWLGL 94

Query: 106 TQFSDLTPAEFRRTYLGLRRK--LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQG 163
            +F+DLT  EF+  YLGL      R    + +   +  +DLP   DWR+KGAV  VK+QG
Sbjct: 95  NEFADLTHDEFKAAYLGLDAAPARRGSSRSFRYEDVSASDLPKSVDWRKKGAVTEVKNQG 154

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCW+FST  A+EG N + TG L +LSEQ+L+DC  +         +SGCNGGLM+ A
Sbjct: 155 QCGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDCSVD--------GNSGCNGGLMDYA 206

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNG 282
           F Y   +GGL  EE YPY   + G      K++  A +++ +  V  +++Q     + + 
Sbjct: 207 FSYIASSGGLHTEEAYPYL-MEEGSCGDGKKAESEAVTISGYEDVPANDEQALIKALAHQ 265

Query: 283 PLAVAINAV--YMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
           P++VAI A   + Q Y GGV   P  C  +LDHGV  VGYGS      + K   Y I++N
Sbjct: 266 PVSVAIEASGRHFQFYSGGVFDGP--CGAQLDHGVAAVGYGSD-----KGKGHDYIIVRN 318

Query: 340 SWGESWGENGYYKICR----GRNVCGVDSMVS 367
           SWG  WGE GY ++ R    G  +CG++ M S
Sbjct: 319 SWGAQWGEKGYIRMKRGTSNGEGLCGINKMAS 350


>gi|343978787|gb|AEM76722.1| cathepsin L-like proteinase [Triatoma brasiliensis]
          Length = 330

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/319 (41%), Positives = 172/319 (53%), Gaps = 30/319 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRA----ARHQKLDPSATHGITQFSDLTPAE 115
           +  FK    K Y +Q E   R  IF  N +R     A++++ + S    +  F DL   E
Sbjct: 27  WETFKVVHGKNYKNQFEEMFRRKIFMNNKKRIEAHNAKYEQGEVSYKMKMNHFGDLMSHE 86

Query: 116 FRRTYLGLRRKLRLPKDADQAPI-LPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFST 173
            +    G +     P    +  I  P+ND LP   DWR+KGAV PVKDQG CGSCWSFS 
Sbjct: 87  IKALMNGFKM---TPNTKREGKIYFPSNDKLPKSVDWRQKGAVTPVKDQGQCGSCWSFSA 143

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TG+LEG  FL  GKLVSLSEQ L+DC  E         ++GC GGLM+ AF+Y     G+
Sbjct: 144 TGSLEGQIFLKKGKLVSLSEQNLMDCSKEYG-------NNGCEGGLMDKAFQYVSDNKGI 196

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E  YPY   D  +AC+F K K+  +   +  +   DE  +   L   GP++VAI+A +
Sbjct: 197 DTESSYPYEARD--YACRFKKDKVGGTDKGYVDIPEGDEKALQNALATVGPISVAIDASH 254

Query: 293 --MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
                Y  GV + PY  S  LDHGVL VGYG+          + YW++KNSWG SWGE+G
Sbjct: 255 ESFHFYSEGVYNEPYCSSYDLDHGVLAVGYGTE-------NGQDYWLVKNSWGPSWGESG 307

Query: 350 YYKICRGR-NVCGVDSMVS 367
           Y KI R   N CG+ SM S
Sbjct: 308 YIKIARNHSNHCGIASMAS 326


>gi|4886998|gb|AAD32136.1|AF121837_1 cathepsin L [Mus musculus]
 gi|4887000|gb|AAD32137.1|AF121838_1 cathepsin L [Mus musculus]
 gi|4887002|gb|AAD32138.1|AF121839_1 cathepsin L [Mus musculus]
 gi|200501|gb|AAA39984.1| preprocathepsin L precursor [Mus musculus]
          Length = 334

 Score =  214 bits (544), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 172/322 (53%), Gaps = 25/322 (7%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FS 109
             AE H   +K    + Y + EE + R  I++ N+R    H     +  HG +     F 
Sbjct: 25  FSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRIIQLHNGEYSNGQHGFSMEMNAFG 81

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW
Sbjct: 82  DMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCW 139

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS +G LEG  FL TGKL+SLSEQ LVDC H          + GCNGGLM+ AF+Y  +
Sbjct: 140 AFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKE 192

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  EE YPY   D   +CK+      A+   F  +   E  +   +   GP++VA++
Sbjct: 193 NGGLDSEESYPYEAKDG--SCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 290 AVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +  +Q Y  G+   P   S+ LDHGVLLVGYG  G    + K   YW++KNSWG  WG
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWG 307

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
             GY KI + R N CG+ +  S
Sbjct: 308 MEGYIKIAKDRDNHCGLATAAS 329


>gi|449275508|gb|EMC84350.1| Cathepsin L1, partial [Columba livia]
          Length = 319

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 135/319 (42%), Positives = 173/319 (54%), Gaps = 22/319 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H+ L+K   NK Y  +EE   R  +++ NL+    H        H    G+ QF D+T  
Sbjct: 9   HWQLWKSWHNKDYHEREE-SWRRVVWEKNLKMIELHNLDHTLGKHSYKLGMNQFGDMTTE 67

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EFR+   G   K    K      + P+  + P   DWREKG V PVKDQG CGSCW+FST
Sbjct: 68  EFRQLMNGYAHKKSERKYRGSQFLEPSFLEAPRSVDWREKGYVTPVKDQGQCGSCWAFST 127

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TGALEG +F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    GG+
Sbjct: 128 TGALEGQHFRKTGKLVSLSEQNLVDCSR---PE----GNQGCNGGLMDQAFQYVQDNGGI 180

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY 292
             EE YPYT  D    C++     AA+   F  +    E  +   +   GP++VAI+A +
Sbjct: 181 DSEESYPYTAKD-DEDCRYKAEYNAANDTGFVDIPQGHERALMKAVAAVGPVSVAIDAGH 239

Query: 293 --MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y  G+     CS   LDHGVL+VGYG  G     +  K YWI+KNSWGE WG+ G
Sbjct: 240 SSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEG---EDVDGKKYWIVKNSWGEKWGDKG 296

Query: 350 YYKICRGR-NVCGVDSMVS 367
           Y  + + R N CG+ +  S
Sbjct: 297 YIYMAKDRKNHCGIATAAS 315


>gi|325303202|tpg|DAA34687.1| TPA_inf: cathepsin L-like cysteine proteinase B [Amblyomma
           variegatum]
          Length = 337

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 132/332 (39%), Positives = 178/332 (53%), Gaps = 31/332 (9%)

Query: 49  TNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHG 104
           T+ +L+GAE  +S FK    K Y S+ E  +R  I+  N    ARH +       S    
Sbjct: 20  THQELVGAE--WSAFKALHGKEYQSETEEYYRLKIYMENRMMIARHNEKYANNKVSYKLA 77

Query: 105 ITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPT----NDLPADFDWREKGAVGPVK 160
           + ++ D+   EF  T  G RR  R         I P       LP   DWR+KGAV PVK
Sbjct: 78  MNEYGDMLHHEFVSTRNGFRRDYRSKPRQGSFYIEPEGIEDKHLPKTVDWRKKGAVTPVK 137

Query: 161 DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
           +QG CGSCW+FSTTG+LEG +F  +G +VSLSEQ LVDC            ++GC GGLM
Sbjct: 138 NQGQCGSCWAFSTTGSLEGQHFRKSGDMVSLSEQNLVDC-------STAFGNNGCEGGLM 190

Query: 221 NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVK 280
           ++AF+Y    GG+  E+ YPY GTD    C F KS + A+   F  +    + +    V 
Sbjct: 191 DNAFKYIKANGGIDTEKSYPYNGTDG--TCHFKKSDVGATDTGFVDIPEGNEHLLKKAVA 248

Query: 281 N-GPLAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
             GP++VAI+A +   Q Y  GV   P   S  LDHGVL+VGYG+         ++ YW+
Sbjct: 249 TVGPISVAIDASHQSFQFYSQGVYDEPECSSENLDHGVLVVGYGTK-------DDQDYWL 301

Query: 337 IKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           +KNSWG +WG+ GY  + R + N CG+ S  S
Sbjct: 302 VKNSWGTTWGDGGYIYMTRNKDNQCGIASSAS 333


>gi|50355615|dbj|BAD29956.1| cysteine protease [Daucus carota]
          Length = 423

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 126/309 (40%), Positives = 178/309 (57%), Gaps = 23/309 (7%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQK-LDPSATHGITQFSDLTPAEFRRTYLGLR 124
           K +K Y +    + RF IFK NLR    H K ++ S   G+ +F+DL+  E++  +LG R
Sbjct: 13  KHHKNYNALGAKEKRFEIFKDNLRFIDEHNKGVNQSFKLGLNKFADLSNEEYKSMFLGGR 72

Query: 125 R-KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
             + R   ++D+      ++LP   DWREKGAV PVKDQG CGSCW+FST  A+EG N +
Sbjct: 73  MVRDRKGFESDRFKYGVGDELPQSVDWREKGAVAPVKDQGQCGSCWAFSTVAAVEGINQI 132

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
           ATG L+SLSEQ+LVDCD           + GCNGG M+ AFE+ +K GG+  E+DYPY G
Sbjct: 133 ATGDLISLSEQELVDCDK--------GFNQGCNGGFMDYAFEFIVKNGGIDTEDDYPYKG 184

Query: 244 TDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVS 301
            D G   +  K+    ++  F  V  ++++     V + P++VAI A     Q Y  G+ 
Sbjct: 185 VD-GQCDQNRKNAKVVTINGFEDVPQNDEKSLKKAVAHQPVSVAIEAGGRAFQLYESGIF 243

Query: 302 CPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 361
              +C   LDHGV+ VGYG+          K YWI++NSWG +WGENGY ++   RNV  
Sbjct: 244 -NGLCGTDLDHGVVAVGYGTE-------DGKDYWIVRNSWGPNWGENGYIRL--ERNVAS 293

Query: 362 VDSMVSTVA 370
            ++    +A
Sbjct: 294 TNTGKCGIA 302


>gi|340380717|ref|XP_003388868.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 337

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/328 (38%), Positives = 187/328 (57%), Gaps = 26/328 (7%)

Query: 48  STNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAAR-HQKLDPSATHGIT 106
           S ++D + AE  F+++ KK+ K Y++ EE++ R  ++ +N     + +++  P   + + 
Sbjct: 24  SPSDDEVMAES-FNMWMKKYEKTYSTMEEYNERLRVYTSNYYYIEQLNKEHGPHTEYELN 82

Query: 107 QFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCG 166
           QFSDLT AEF++ YL   +         Q P+   +  P   DWREK  + PVKDQG CG
Sbjct: 83  QFSDLTFAEFKKIYLTEPQHCSATNGNFQKPVNARD--PVAVDWREKNVITPVKDQGKCG 140

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FSTTG LE  + + TG+L+SLSEQQLVDC    +       + GCNGGL + AFEY
Sbjct: 141 SCWTFSTTGCLEAHHAIKTGQLISLSEQQLVDCAGAFN-------NHGCNGGLPSQAFEY 193

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLD-EDQIAANLVKNGPLA 285
               GG+  E +Y YT  D    C+F+ S +AA+V++   ++ D E  I   +   GP++
Sbjct: 194 IKYNGGIESESNYNYTAKDG--VCRFNSSLVAATVSDVVNITKDAEGDIGTAVANVGPVS 251

Query: 286 VAINAVY-MQTYIGGVSCPYI--CSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
           +A       Q Y  GV    I  CS+   +++H VL+VGY        +L E+ YWI+KN
Sbjct: 252 IAFEVTKSFQHYKKGVYQGEIEVCSQSPDKVNHAVLVVGYNQT-----KLGEE-YWIVKN 305

Query: 340 SWGESWGENGYYKICRGRNVCGVDSMVS 367
           SW  SWG +GY+ I RG N CG+ +  S
Sbjct: 306 SWSASWGMDGYFWIRRGHNACGLATCAS 333


>gi|297845064|ref|XP_002890413.1| hypothetical protein ARALYDRAFT_472321 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297336255|gb|EFH66672.1| hypothetical protein ARALYDRAFT_472321 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 357

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 172/317 (54%), Gaps = 25/317 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +   F KAY + EE   RF +FK NL+      K   S   G+ +F+DL+  EF++ 
Sbjct: 51  FENWISNFEKAYETVEEKLLRFEVFKDNLKHIDETNKKVKSYWLGLNEFADLSHEEFKKM 110

Query: 120 YLGLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           YLGL+  +    +          D+   P   DWR+KGAV  VK+QGSCGSCW+FST  A
Sbjct: 111 YLGLKTDIVRRDEERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAA 170

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG N + TG L +LSEQ+L+DCD         + ++GCNGGLM+ AFEY +K GGL +E
Sbjct: 171 VEGINKIVTGNLTTLSEQELIDCDT--------TYNNGCNGGLMDYAFEYIVKNGGLRKE 222

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQ 294
           EDYPY+  +     + D+S+      +  V + DE  +   L    PL+VAI+A     Q
Sbjct: 223 EDYPYSMEEGTCEMQKDESETVTIDGHQDVPTNDEKSLLKALAHQ-PLSVAIDASGREFQ 281

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y G       C   LDHGV  VGYGS+       K   Y I+KNSWG  WGE GY ++ 
Sbjct: 282 FYSGVSVFDGRCGVDLDHGVAAVGYGSS-------KGSDYIIVKNSWGPKWGEKGYIRLK 334

Query: 355 RG----RNVCGVDSMVS 367
           R       +CG++ M S
Sbjct: 335 RNTGKPEGLCGINKMAS 351


>gi|378943048|gb|AFC76265.1| cathepsin L-like protease [Leishmania major]
          Length = 348

 Score =  214 bits (544), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/310 (41%), Positives = 168/310 (54%), Gaps = 27/310 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ A F   
Sbjct: 38  FEEFKRTYQRAYGTLTEEQRRLANFERNLELMREHQARNPHARFGITKFFDLSEAVFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  KLV LSEQQLV CDH          D+GC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHKLVRLSEQQLVSCDH---------VDNGCGGGLMLQAFEWVLRNMNGTV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIA--ASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY +G      C  + S++A  A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEKSYPYVSGNGDVPECS-NSSELAPGARIDGYVSMESSERVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
               +Y  GV    I   +L+HGVLLVGY   G       E PYW+IKNSWGE WGE GY
Sbjct: 268 SSFMSYHSGVLTSCI-GEQLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKGY 319

Query: 351 YKICRGRNVC 360
            ++  G N C
Sbjct: 320 VRVTMGVNAC 329


>gi|357619725|gb|EHJ72184.1| hypothetical protein KGM_03271 [Danaus plexippus]
          Length = 338

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 175/319 (54%), Gaps = 29/319 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  F K +NK Y  + E + RF IF  NL+      +   +A +GI +FSDL+  EF + 
Sbjct: 41  FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKY 99

Query: 120 YLGLRRKLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           Y GL+R+     +  +   LP +     P  FDWR+KG V  +K+Q  CGSCW+FS    
Sbjct: 100 YTGLKREESPSNEDHKKTDLPESFNVTAPDQFDWRKKGVVSSIKNQKHCGSCWAFSAAAN 159

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +E  + + TGKL+ +SEQQL+DCD           DSGC+GGL   A  Y + A G M  
Sbjct: 160 VESIHAIKTGKLIDVSEQQLLDCD---------KYDSGCSGGLPWDALRYFV-ANGAMSL 209

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVS-LDEDQIAANLVKNGPLAVAINAVYMQT 295
           + YPY   +    C++D SK+   +  + + S + EDQI  +L   GPL++AI+   ++ 
Sbjct: 210 KSYPYVAKE--GKCRYDSSKVEIRLKGYKIFSKISEDQIKEHLYNIGPLSIAIDVSPIKP 267

Query: 296 YIGGV---SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Y+GG+    C  +C  +++H VLLVGYG             YWI+KNSWG +WGENGY++
Sbjct: 268 YVGGIVMEECHEVC--QVNHAVLLVGYGKEYSV-------EYWIVKNSWGPNWGENGYFR 318

Query: 353 ICRGRNVCGVDSMVSTVAA 371
           + RG N   + S   T A 
Sbjct: 319 MERGVNCLLLTSTGITTAV 337


>gi|301769891|ref|XP_002920367.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
 gi|281346353|gb|EFB21937.1| hypothetical protein PANDA_009084 [Ailuropoda melanoleuca]
          Length = 333

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 133/319 (41%), Positives = 177/319 (55%), Gaps = 27/319 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPA 114
           H+S +K+   K Y   EE   R  +++ N++   +H +      H  T     F DLT  
Sbjct: 28  HWSHWKEAHGKLYDKDEEGQRR-RVWEKNMKMIDQHNEEYSQGQHSFTMAMNAFGDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDAD--QAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF++    L  K++ P++ +  QAP+    ++PA  DWREKG V PVK QG C SCW+FS
Sbjct: 87  EFKQVLNDL--KIQKPEEGNVFQAPLFA--EIPASVDWREKGYVTPVKYQGHCQSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TGALEG  F  TGKLVSLSEQ LVDC        P + D GC GGLM++AF Y    GG
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCSW------PQNND-GCRGGLMDNAFRYVKDNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L   E YPY G  R  +CK+   K AA++  F  VS  ED +   +   GP++ A+++  
Sbjct: 196 LDSAESYPYLG--RNESCKYRPEKSAANLTTFWSVSNKEDGLMTTVATVGPVSAAVDSSL 253

Query: 293 --MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y  G+   P   S RL+H VL+VGYG  G      + K YWIIKNSWG +WG  G
Sbjct: 254 HSFQFYKKGIYYDPNCRSNRLNHAVLVVGYGFEGEES---ENKKYWIIKNSWGTNWGMKG 310

Query: 350 YYKICRGR-NVCGVDSMVS 367
           Y  + + R N CG+ +M S
Sbjct: 311 YMLLAKDRDNHCGIATMAS 329


>gi|71084302|gb|AAZ23596.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  214 bits (544), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 170/312 (54%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSVVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  +L +LSEQQLV CD           DSGC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHRLTALSEQQLVSCD---------DMDSGCGGGLMTQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  T  G+  +   S      A +  + ++  +E  +AA L K+GP+++ ++A
Sbjct: 209 FTEDSYPYVST-FGYVPECTNSSQLVPGARIDGYVMIESNETVMAAWLAKSGPISIGVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y GGV  SC     ++L+HGVLLVGY   G       E PYW+IKNSWGE+WGE 
Sbjct: 268 SSFMSYHGGVLTSC---AGKQLNHGVLLVGYNMTG-------EVPYWVIKNSWGENWGEK 317

Query: 349 GYYKICRGRNVC 360
           GY ++  G N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|113195461|ref|YP_717598.1| V-CATH [Clanis bilineata nucleopolyhedrosis virus]
 gi|66968272|gb|AAY59557.1| V-CATH [Clanis bilineata nucleopolyhedrosis virus]
          Length = 325

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 119/326 (36%), Positives = 180/326 (55%), Gaps = 27/326 (8%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           DLL A  +F  F   +NK Y   +E  +R+ IFK NL       +++  A   I +FSD+
Sbjct: 19  DLLKAPDYFESFVANYNKMYNDTQEKAYRYKIFKHNLEEINIKNQVEDHAVFSINKFSDM 78

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           + +E    Y GL     + ++  +A IL  P N  P +FDWR+  AV PV+ QG+CGSCW
Sbjct: 79  SKSEIISKYTGLSLPSLMQENFCRAIILDGPPNKAPINFDWRQYNAVTPVRVQGNCGSCW 138

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FST   +E    +   K +SLS QQLVDCD         + + GC GGL+++A E  + 
Sbjct: 139 AFSTLAGIESQYSIKYNKQISLSVQQLVDCD---------TSNMGCAGGLLHTALEQIIN 189

Query: 230 A-GGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVA 287
           A GG+++EEDYPY G D+   C    +  A  V   +  + ++E+++   L   GP+ VA
Sbjct: 190 AGGGVLQEEDYPYKGVDK--QCNLPHNNFAVQVLGCYRYIVMNEEKLKDVLRAVGPIPVA 247

Query: 288 INAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           I+A  +  Y  G+  +C Y     L+H VLLVGYG            PYW +KN+WG+ W
Sbjct: 248 IDAASIVDYSRGIIRTCTY---YGLNHAVLLVGYGVQ-------DGVPYWTLKNTWGDDW 297

Query: 346 GENGYYKICRGRNVCGVDSMVSTVAA 371
           GE+GY+++ +  N CG+ + +++ A 
Sbjct: 298 GEHGYFRVRQNVNSCGIINDLASTAV 323


>gi|148224022|ref|NP_001087489.1| cathepsin L2 precursor [Xenopus laevis]
 gi|51258284|gb|AAH80004.1| MGC81823 protein [Xenopus laevis]
          Length = 335

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 172/318 (54%), Gaps = 23/318 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H+ L+K    K+Y  +EE   R  +++ NLR    H        H    G+ QF D+T  
Sbjct: 28  HWHLWKNWHKKSYLPKEE-GWRRVLWEKNLRTIEFHNLDHSLGKHSYRLGMNQFGDMTNE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EFR+   G + +  +      AP     + P   DWREKG V PVKDQG CGSCW+FSTT
Sbjct: 87  EFRQLMNGYKNQKMIKGSTFLAP--NNFEAPKTVDWREKGYVTPVKDQGQCGSCWAFSTT 144

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALEG ++   GKL+SLSEQ LVDC            + GCNGGLM+ AF+Y    GG+ 
Sbjct: 145 GALEGQHYRKAGKLISLSEQNLVDCSR-------AQGNQGCNGGLMDQAFQYVKDNGGID 197

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPYT  D    C +D +  +A+   F  V S  E  +   +   GP++VA++A + 
Sbjct: 198 SEDSYPYTAKDD-QECHYDPNYNSANDTGFVDVPSGSEKDLMKAVASVGPVSVAVDAGHK 256

Query: 293 -MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             Q Y  G+   P   S  LDHGVL+VGYG  G     +  K YWI+KNSW E WG NGY
Sbjct: 257 SFQFYQSGIYYDPECSSEDLDHGVLVVGYGFEG---EDVDGKRYWIVKNSWSEKWGNNGY 313

Query: 351 YKICRGR-NVCGVDSMVS 367
            KI + R N CG+ +  S
Sbjct: 314 IKIAKDRHNHCGIATAAS 331


>gi|394331816|gb|AFN27127.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 129/312 (41%), Positives = 169/312 (54%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
           ++E    LA  +L +LSEQQLV CD +         D+GC GGLM  AFE+ L+   G +
Sbjct: 158 SIESQWALAGHRLTALSEQQLVSCDDK---------DNGCAGGLMLQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S      A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEDSYPYV-SSTGYVPECSNSSQLVPGARIDGYLTIESSETVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y  GV  SC       L+HGVLLVGY   G       E PYW+IKNSWGE+WGEN
Sbjct: 268 SSFMSYQSGVLTSC---AGDALNHGVLLVGYNRTG-------EVPYWVIKNSWGENWGEN 317

Query: 349 GYYKICRGRNVC 360
           GY ++  G N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|402770499|gb|AFQ98384.1| cathepsin L, partial [Hyalomma anatolicum anatolicum]
          Length = 312

 Score =  213 bits (543), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 172/320 (53%), Gaps = 28/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K+Y S+ E   R+ IF  N     +  A++ K   S   G+ QF DL P 
Sbjct: 6   QWEAFKTTHKKSYQSKMEELLRYKIFTENSLLIAKHNAKYAKGLVSYKLGMNQFGDLLPH 65

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF + + G   + R  + +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 66  EFAKMFNGYHGE-RKGRGSTFLPPANVNDSSLPKTVDWRKKGAVTPVKDQGQCGSCWAFS 124

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL +GKLVSLSEQ L+DC      E       GC GGLM++AF+Y     G
Sbjct: 125 ATGSLEGQHFLKSGKLVSLSEQNLIDCSGSFGNE-------GCGGGLMDNAFKYIKANDG 177

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  EE YPY   D    C+F K  + A+   F  +    ED +   +   GP++VAI+A 
Sbjct: 178 IDTEESYPYEAMD--GDCRFKKEDVGATDTGFVDIQQGSEDDLQKAVATVGPISVAIDAS 235

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV   P   S  LDHGVL VGYG           K YW++KNSW E+WG+N
Sbjct: 236 HSSFQLYSEGVYDEPNCSSEELDHGVLAVGYGVK-------NGKKYWLVKNSWAETWGDN 288

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  + R + N CG+ S  S
Sbjct: 289 GYILMSRDKDNQCGIASSAS 308


>gi|38346007|emb|CAD40110.2| OSJNBa0035O13.9 [Oryza sativa Japonica Group]
 gi|125589429|gb|EAZ29779.1| hypothetical protein OsJ_13837 [Oryza sativa Japonica Group]
          Length = 314

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 136/318 (42%), Positives = 174/318 (54%), Gaps = 34/318 (10%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI-----TQFSDLTPAEFRRTY 120
           K  +AYA   E   R  +F+ N+   A  + ++ +A+         QF+DLT AEFR T 
Sbjct: 11  KHGRAYADDAEKARRLEVFRDNV---AFIESVNAAASQHKFWLEENQFADLTNAEFRATR 67

Query: 121 LGLR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
            GLR    R  R P     A +  T DLPA  DWR KGAV PVKDQG CG CW+FS   A
Sbjct: 68  TGLRPSSSRGNRAPTSFRYANV-STGDLPASVDWRGKGAVNPVKDQGDCGCCWAFSAVAA 126

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EGA  LATGKLVSLSEQQLV CD + +       D GC GGLM+ AF++ +K GGL  E
Sbjct: 127 MEGAVKLATGKLVSLSEQQLVSCDVKGE-------DQGCEGGLMDDAFDFIIKNGGLAAE 179

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQ 294
            DYPYT +D            AA++  +  V  +++      V N P++VAI+    + Q
Sbjct: 180 SDYPYTASDD-KCATAGAGAAAATIKGYEDVPANDEAALLKAVANQPVSVAIDGGDRHFQ 238

Query: 295 TYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y GGV S    C+  LDH +  VGYG A           YW++KNSWG SWGE+GY ++
Sbjct: 239 FYKGGVLSGAAGCATELDHAITAVGYGVAS------DGTKYWLMKNSWGTSWGEDGYVRM 292

Query: 354 CRG----RNVCGVDSMVS 367
            RG      VCG+  M S
Sbjct: 293 ERGVADKEGVCGLAMMAS 310


>gi|218195711|gb|EEC78138.1| hypothetical protein OsI_17694 [Oryza sativa Indica Group]
          Length = 458

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/321 (38%), Positives = 176/321 (54%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  +   A   ++ +K +  K Y +  E + R+  F+ NLR    H     + 
Sbjct: 25  IVSYGERSEEE---ARRLYAEWKAEHGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 81

Query: 102 TH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLGLR K R  +      +   N+ LP   DWR KGAV
Sbjct: 82  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 141

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             +KDQG CGSCW+FS   A+EG N + TG L+SLSEQ+LVDCD         S + GCN
Sbjct: 142 AEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCN 193

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AF++ +  GG+  E+DYPY G D         +K+  ++ ++  V+ + +    
Sbjct: 194 GGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKV-VTIDSYEDVTPNSETSLQ 252

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K Y
Sbjct: 253 KAVANQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGTE-------NGKDY 304

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI++NSWG+SWGE+GY ++ R
Sbjct: 305 WIVRNSWGKSWGESGYVRMER 325


>gi|116563690|gb|ABJ99858.1| cathepsin L [Hippoglossus hippoglossus]
          Length = 336

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 135/320 (42%), Positives = 176/320 (55%), Gaps = 25/320 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H+ L+K   +K Y  +EE   R  +++ NL++   H       TH    G+  F D+T  
Sbjct: 27  HWDLWKSWHSKKYHEKEEGWRRM-VWEKNLQKIELHNLEHSMGTHSFRLGMNHFGDMTHE 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EFR+   G   KL+  +    +  +  N +  P+  DWREKG V PVKDQG CGSCW+FS
Sbjct: 86  EFRQIMNGY--KLKTQRKFTGSLFMEPNFMTAPSAVDWREKGYVTPVKDQGQCGSCWAFS 143

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGALEG  F  TGKLVSLSEQ LVDC     PE     + GC GGLM+ AF+Y     G
Sbjct: 144 TTGALEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCGGGLMDQAFQYVTDNQG 196

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           L  E+ YPYTGTD    C +D    +A+   F  V S  E  +   +   GP++VAI+A 
Sbjct: 197 LDSEDSYPYTGTDD-QPCHYDPLYNSANDTGFVDVPSGKEHALMKAVASVGPVSVAIDAG 255

Query: 292 Y--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  G+     C S  LDHGVL VGYG  G   +    K +WI+KNSWGE WG+ 
Sbjct: 256 HESFQFYQSGIYYEKECSSEELDHGVLAVGYGFEGEDKMG---KKFWIVKNSWGEKWGDK 312

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  + + R N CG+ +  S
Sbjct: 313 GYIYMAKDRKNHCGIATAAS 332


>gi|52345644|ref|NP_001004869.1| cathepsin L2 precursor [Xenopus (Silurana) tropicalis]
 gi|49522051|gb|AAH74718.1| MGC69486 protein [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 176/320 (55%), Gaps = 23/320 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           ++H++L+K    K+YA +EE   R  +++ NLR    H        H    G+ QF D+T
Sbjct: 26  DNHWNLWKNWHKKSYAPKEE-GWRRVLWEKNLRMIEFHNLEHSLGKHSHSLGMNQFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR+   G + + ++      AP     + P   DWR+KG V PVKDQG CGSCW+FS
Sbjct: 85  NEEFRQLMNGYKNQKKIRGSTFLAP--NNFESPKSVDWRKKGYVTPVKDQGQCGSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGALEG ++  TGK++SLSEQ LVDC            + GCNGGLM+ AF+Y    GG
Sbjct: 143 TTGALEGQHYRNTGKMISLSEQNLVDCSR-------AQGNQGCNGGLMDQAFQYVKDNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPYT  D    C +D +  +A+   F  V S  E  +   +   GP++VA++A 
Sbjct: 196 IDSEDSYPYTAKDD-QECHYDPNYNSANDTGFVDVTSGSEKDLMNAVASVGPVSVAVDAG 254

Query: 292 Y--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  G+   P   S  LDHGVL+VGYG  G        K YWI+KNSW E WG +
Sbjct: 255 HQSFQFYKSGIYYEPECSSEDLDHGVLVVGYGFEGEDE---DGKKYWIVKNSWSEKWGND 311

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  I + R N CG+ +  S
Sbjct: 312 GYIYIAKDRHNHCGIATAAS 331


>gi|346469447|gb|AEO34568.1| hypothetical protein [Amblyomma maculatum]
          Length = 333

 Score =  213 bits (543), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 169/320 (52%), Gaps = 27/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSATHGITQFSDLTPA 114
            +  FK    K Y S  E   RF IF  N    A+H     K   S   GI QF+DL P 
Sbjct: 26  EWEAFKSTHKKTYKSNVEELLRFKIFTENSLFIAKHNVKYAKGLVSYKLGINQFADLLPH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF +   G + K    + +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFVKMMNGYQGKRLAGRGSTYLPPANLNDSSLPKTVDWRKKGAVTPVKDQGQCGSCWAFS 145

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           +TG+LEG +FL TGKLVSLSEQ LVDC            + GCNGGLM+++F Y    GG
Sbjct: 146 STGSLEGQHFLKTGKLVSLSEQNLVDC-------SSAYGNQGCNGGLMDNSFNYIKANGG 198

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C++ K  + A+   F  +    E  +   +   GP++VAI+A 
Sbjct: 199 IDTEDSYPYEAED--GDCRYKKEDVGATDTGFVDIKEGSEKDLQKAVATVGPVSVAIDAS 256

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               Q Y  GV   P   S  LDHGVL VGYG           K YW++KNSW E+WG++
Sbjct: 257 QQSFQLYSEGVYDEPNCSSESLDHGVLAVGYGVK-------NGKKYWLVKNSWAETWGQD 309

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  + R + N CG+ S  S
Sbjct: 310 GYILMSRDKNNQCGIASSAS 329


>gi|33348836|gb|AAQ16118.1| cathepsin L-like cysteine proteinase B [Rhipicephalus
           haemaphysaloides haemaphysaloides]
          Length = 335

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/332 (40%), Positives = 180/332 (54%), Gaps = 31/332 (9%)

Query: 49  TNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSATHG 104
           T+ +L+GAE  +S FK    K YAS  E  +R  I+  N  + ARH     K   S    
Sbjct: 18  THQELVGAE--WSAFKALHGKDYASDTEEYYRLKIYMENRLKIARHNEKYAKSQVSYKLA 75

Query: 105 ITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN----DLPADFDWREKGAVGPVK 160
           + +F DL   EF  T  G +R  R         + P       LP   DWR+KGAV PVK
Sbjct: 76  MNEFGDLLHHEFVSTRNGFKRNYRDSPREGSFFVEPEGFEDLQLPKTVDWRKKGAVTPVK 135

Query: 161 DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
           +QG CGSCW+FSTTG+LEG +F  T KLVSLSEQ LVDC            ++GC GGLM
Sbjct: 136 NQGQCGSCWAFSTTGSLEGPHFRKTRKLVSLSEQNLVDCSRSFG-------NNGCEGGLM 188

Query: 221 NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLV 279
           ++AF+Y     G+  E  YPY  TD    C F++S + A+   F  +   DE+++   + 
Sbjct: 189 DNAFKYIKSNKGIDTEWSYPYNATD--GVCHFNRSDVGATDTGFVDIPEGDENKLKKAVA 246

Query: 280 KNGPLAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
             GP++VAI+A +   Q Y  GV   P   S +LDHGVL+VGYG+          + YW+
Sbjct: 247 AVGPVSVAIDASHESFQFYSEGVYDEPECSSEQLDHGVLVVGYGTK-------DGQDYWL 299

Query: 337 IKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           +KNSWG +WG+ GY  + R + N CG+ S  S
Sbjct: 300 VKNSWGTTWGDEGYIYMTRNKDNQCGIASSAS 331


>gi|74222595|dbj|BAE38161.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 172/322 (53%), Gaps = 25/322 (7%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FS 109
             AE H   +K    + Y + EE + R  I++ N+R    H     +  HG +     F 
Sbjct: 25  FSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFG 81

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW
Sbjct: 82  DMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCW 139

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS +G LEG  FL TGKL+SLSEQ LVDC H          + GCNGGLM+ AF+Y  +
Sbjct: 140 AFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKE 192

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  EE YPY   D   +CK+      A+   F  +   E  +   +   GP++VA++
Sbjct: 193 NGGLDSEESYPYEAKDG--SCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 290 AVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +  +Q Y  G+   P   S+ LDHGVLLVGYG  G    + K   YW++KNSWG  WG
Sbjct: 251 ASHPSLQFYSLGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWG 307

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
             GY KI + R N CG+ +  S
Sbjct: 308 MEGYIKIAKDRDNHCGLATAAS 329


>gi|297802228|ref|XP_002868998.1| cysteine proteinase [Arabidopsis lyrata subsp. lyrata]
 gi|297314834|gb|EFH45257.1| cysteine proteinase [Arabidopsis lyrata subsp. lyrata]
          Length = 375

 Score =  213 bits (543), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/290 (41%), Positives = 167/290 (57%), Gaps = 27/290 (9%)

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLR----RKLRL 129
           + D RF IFK NLR    H + + +AT+  G+T+F+DLT  E+R  YLG R    R++  
Sbjct: 69  DQDKRFNIFKDNLRFIDLHNEKNKNATYKLGLTKFTDLTNEEYRSLYLGARTEPVRRIAK 128

Query: 130 PKDADQ--APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
            K+ +Q  +  +   ++P   DWR KGAV P+KDQG+CGSCW+FST  A+EG N + TG+
Sbjct: 129 AKNVNQKYSAAVDGKEVPETVDWRLKGAVNPIKDQGTCGSCWAFSTAAAVEGINKIVTGE 188

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           L+SLSEQ+LVDCD+        S + GCNGGLM+ AF++ +K GGL  E+DYPY G   G
Sbjct: 189 LISLSEQELVDCDN--------SYNQGCNGGLMDYAFQFIMKNGGLKTEKDYPYRGFG-G 239

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYI 305
               F K+    S+  +  V   ++      +   P++VAI A     Q Y  G+     
Sbjct: 240 KCNSFLKNAKVVSIDGYEDVPTKDETALKRAISLQPVSVAIEAGGRIFQHYQTGIFTGN- 298

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           C   LDH V+ VGYGS            YWI++NSWG  WGE GY ++ R
Sbjct: 299 CGTNLDHAVVAVGYGSENGV-------DYWIVRNSWGPRWGEEGYIRMER 341


>gi|74213650|dbj|BAE35627.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/322 (39%), Positives = 172/322 (53%), Gaps = 25/322 (7%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FS 109
             AE H   +K    + Y + EE + R  I++ N+R    H     +  HG +     F 
Sbjct: 25  FSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFG 81

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK+QG CGSCW
Sbjct: 82  DMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNQGQCGSCW 139

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS +G LEG  FL TGKL+SLSEQ LVDC H          + GCNGGLM+ AF+Y  +
Sbjct: 140 AFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKE 192

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  EE YPY   D   +CK+      A+   F  +   E  +   +   GP++VA++
Sbjct: 193 NGGLDSEESYPYEAKDG--SCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 290 AVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +  +Q Y  G+   P   S+ LDHGVLLVGYG  G    + K   YW++KNSWG  WG
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWG 307

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
             GY +I + R N CG+ +  S
Sbjct: 308 MEGYIEIAKDRDNHCGLATAAS 329


>gi|162459393|ref|NP_001105993.1| cysteine protease component of protease-inhibitor complex precursor
           [Zea mays]
 gi|6682829|dbj|BAA88898.1| cysteine protease component of protease-inhibitor complex [Zea
           mays]
          Length = 465

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/321 (39%), Positives = 176/321 (54%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E ++ +   A   ++ +     + Y +  E + R+ +F+ NLR    H     + 
Sbjct: 29  IVSYGERSDEE---ARRMYAEWMAAHGRTYNAVGEEERRYQVFRDNLRYIDAHNAAADAG 85

Query: 102 TH----GITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLG R R  R  K   +       DLP   DWR KGAV
Sbjct: 86  VHSFRLGLNRFADLTNDEYRATYLGARTRPQRERKLGARYHAADNEDLPESVDWRAKGAV 145

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             VKDQGS GSCW+FST  A+EG N + TG L+SLSEQ+LVDCD         S + GCN
Sbjct: 146 AEVKDQGSYGSCWAFSTIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNQGCN 197

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AFE+ +  GG+  E+DYPY GTD G      K+    ++ ++  V  ++++   
Sbjct: 198 GGLMDYAFEFIINNGGIDTEKDYPYKGTD-GRCDVNRKNAKVVTIDSYEDVPANDEKSLQ 256

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K Y
Sbjct: 257 KAVANQPVSVAIEAAGTQFQLYSSGIFTG-SCGTALDHGVTAVGYGTE-------NGKDY 308

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI+KNSWG SWGE+GY ++ R
Sbjct: 309 WIVKNSWGSSWGESGYVRMER 329


>gi|22653679|sp|Q26636.1|CATL_SARPE RecName: Full=Cathepsin L; Contains: RecName: Full=Cathepsin L
           heavy chain; Contains: RecName: Full=Cathepsin L light
           chain; Flags: Precursor
 gi|505140|dbj|BAA03970.1| cathepsin L precursor [Sarcophaga peregrina]
          Length = 339

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/331 (39%), Positives = 184/331 (55%), Gaps = 32/331 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQ 107
           DL+  E H   +K +  K YA++ E   R  IF  N  + A+H +L      S   G+ +
Sbjct: 22  DLIKEEWH--TYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNK 79

Query: 108 FSDLTPAEFRRTYLG----LRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKD 161
           ++D+   EF+ T  G    LR+ +R       A  +P   +  P   DWRE GAV  VKD
Sbjct: 80  YADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKD 139

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QG CGSCW+FS+TGALEG +F   G LVSLSEQ LVDC  +         ++GCNGGLM+
Sbjct: 140 QGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMD 192

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVK 280
           +AF Y    GG+  E+ YPY G D   +C F+K+ I A+   F  +   DE+++   +  
Sbjct: 193 NAFRYIKDNGGIDTEKSYPYEGIDD--SCHFNKATIGATDTGFVDIPEGDEEKMKKAVAT 250

Query: 281 NGPLAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWII 337
            GP++VAI+A +   Q Y  GV + P    + LDHGVL+VGYG+            YW++
Sbjct: 251 MGPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESG------MDYWLV 304

Query: 338 KNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           KNSWG +WGE GY K+ R + N CG+ +  S
Sbjct: 305 KNSWGTTWGEQGYIKMARNQNNQCGIATASS 335


>gi|50355611|dbj|BAD29954.1| cysteine protease [Daucus carota]
          Length = 474

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 138/364 (37%), Positives = 198/364 (54%), Gaps = 43/364 (11%)

Query: 4   KTVVLF--LVSLVVFSAVSSGTLI--DDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH 59
           + +VLF  L S ++ S+ S  ++I  D+   L        D++LS +ES           
Sbjct: 14  QCLVLFFSLASFLMLSSASDMSIITYDETHGLNSPPLRTHDQLLSLYES----------- 62

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRR 118
              +  K +K Y +  E + RF IFK N+    RH  + + S   G+ +F+DLT  E+R 
Sbjct: 63  ---WLVKHHKNYNALGEKETRFGIFKDNVGFVDRHNSMRNQSYKLGLNKFADLTNDEYRS 119

Query: 119 TYLGLRRKLRLPKD-----ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
            YL  +   R  K+     +D+      + LP   DWR++GAV PVKDQG CGSCW+FST
Sbjct: 120 LYLSGKMMKRERKNEDGFRSDRFVFEDGDHLPESVDWRDRGAVAPVKDQGQCGSCWAFST 179

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
            GA+EG N + TG+L+SLSEQ+LVDCD+          + GCNGGLM+ AFE+ +K GG+
Sbjct: 180 VGAVEGINKIVTGELISLSEQELVDCDN--------GYNQGCNGGLMDYAFEFIVKNGGI 231

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--V 291
             E+DYPY G D G   +  K+    ++  +  V  ++++     V + P++VAI A   
Sbjct: 232 DTEDDYPYKGVD-GLCDQNRKNAKVVTINGYEDVPHNDEKSLKKAVAHQPVSVAIEAGGR 290

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
             Q Y  GV     C   LDHGV+ VGYGS          K YWI++NSWG  WGE+GY 
Sbjct: 291 AFQLYESGVFTGQ-CGTELDHGVVAVGYGSE-------NGKDYWIVRNSWGPDWGESGYI 342

Query: 352 KICR 355
           ++ R
Sbjct: 343 RLER 346


>gi|285002340|ref|YP_003422404.1| cathepsin [Pseudaletia unipuncta granulovirus]
 gi|197343600|gb|ACH69415.1| cathepsin [Pseudaletia unipuncta granulovirus]
          Length = 338

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/328 (36%), Positives = 170/328 (51%), Gaps = 25/328 (7%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S   +   DL  +E  F  F  K+ K YA+  E   RF +FKANL         + SA
Sbjct: 19  IVSSMNNLQYDLSNSEVLFDEFVTKYGKVYANDAERKSRFDVFKANLAIINERNAQEESA 78

Query: 102 THGITQFSDLTPAEFRRTYLGLRRKL-----RLPKDADQAPIL--PTNDLPADFDWREKG 154
           T GI  +SDL+  E  R   G +  L     +  K   +  I    T  LP  F+WR+  
Sbjct: 79  TFGINFYSDLSSNELLRKQTGFKTALHNDNEKKSKYCTRRVITGPSTRLLPEAFNWRDSD 138

Query: 155 AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 214
           AV  VK Q  CGSCW+FS    +E   ++   + V LSEQQ+VDCD           ++G
Sbjct: 139 AVTSVKQQRDCGSCWAFSAVANIESQYYIKNKQYVDLSEQQIVDCD---------PINNG 189

Query: 215 CNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQI 274
           CNGGLM+ A EY +++GG+  EEDY Y G +    CK + + +       S    +E+++
Sbjct: 190 CNGGLMSWAMEYVMRSGGVQLEEDYQYVGNE--GVCKNNSANVVQISGCVSYDLRNEERL 247

Query: 275 AANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
              LV NGP++VAI+ + +  Y  G++     +  L+H VLLVGYG            PY
Sbjct: 248 RELLVSNGPISVAIDVMDVTNYQSGIAKHCSVAHGLNHAVLLVGYGVQ-------NNTPY 300

Query: 335 WIIKNSWGESWGENGYYKICRGRNVCGV 362
           W+ KNSWG  WGENGY+++ R  N CG+
Sbjct: 301 WVFKNSWGSDWGENGYFRVLRDVNSCGM 328


>gi|269784818|ref|NP_001161481.1| cathepsin L1 precursor [Gallus gallus]
          Length = 353

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/319 (42%), Positives = 175/319 (54%), Gaps = 22/319 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H+ L+K   +K Y  +EE   R  +++ NL+    H        H    G+ QF D+T  
Sbjct: 43  HWQLWKSWHSKDYHEREE-SWRRVVWEKNLKMIELHNLDHSLGKHSYKLGMNQFGDMTAE 101

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EFR+   G + K    K      + P+  + P   DWREKG V PVKDQG CGSCW+FST
Sbjct: 102 EFRQLMNGYKHKKSERKYRGSQFLEPSFLEAPRSVDWREKGYVTPVKDQGQCGSCWAFST 161

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TGALEG +F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    GG+
Sbjct: 162 TGALEGQHFRKTGKLVSLSEQNLVDCSR---PE----GNQGCNGGLMDQAFQYVQDNGGI 214

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVY 292
             EE YPYT  D    C++     AA+   F  +    ++     V + GP++VAI+A +
Sbjct: 215 DSEESYPYTAKD-DEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGH 273

Query: 293 --MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y  G+     CS   LDHGVL+VGYG  G     +  K YWI+KNSWGE WG+ G
Sbjct: 274 SSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGED---VDGKKYWIVKNSWGEKWGDKG 330

Query: 350 YYKICRGR-NVCGVDSMVS 367
           Y  + + R N CG+ +  S
Sbjct: 331 YIYMAKDRKNHCGIATAAS 349


>gi|74142447|dbj|BAE31977.1| unnamed protein product [Mus musculus]
          Length = 334

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/322 (39%), Positives = 172/322 (53%), Gaps = 25/322 (7%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FS 109
             AE H   +K    + Y + EE + R  I++ N+R    H     +  HG +     F 
Sbjct: 25  FSAEWH--QWKSTHRRLYGTNEE-EWRRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFG 81

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           D+T  EFR+   G R +        Q P++    +P   DWREKG V PVK++G CGSCW
Sbjct: 82  DMTNEEFRQVVNGYRHQKHKKGRLFQEPLMLK--IPKSVDWREKGCVTPVKNKGQCGSCW 139

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS +G LEG  FL TGKL+SLSEQ LVDC H          + GCNGGLM+ AF+Y  +
Sbjct: 140 AFSASGCLEGQMFLKTGKLISLSEQNLVDCSH-------AQGNQGCNGGLMDFAFQYIKE 192

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
            GGL  EE YPY   D   +CK+      A+   F  +   E  +   +   GP++VA++
Sbjct: 193 NGGLDSEESYPYEAKDG--SCKYRAEFAVANDTGFVDIPQQEKALMKAVATVGPISVAMD 250

Query: 290 AVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +  +Q Y  G+   P   S+ LDHGVLLVGYG  G    + K   YW++KNSWG  WG
Sbjct: 251 ASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGYEGTDSNKNK---YWLVKNSWGSEWG 307

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
             GY KI + R N CG+ +  S
Sbjct: 308 MEGYIKIAKDRDNHCGLATAAS 329


>gi|356565778|ref|XP_003551114.1| PREDICTED: thiol protease aleurain-like [Glycine max]
          Length = 353

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 142/375 (37%), Positives = 195/375 (52%), Gaps = 35/375 (9%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH- 59
           M   ++++F    V  +   +G+  DD +  IR  +D   ++L        D++G   H 
Sbjct: 1   MARLSLLIFAFCAVAVAVAVAGSSFDDANP-IRLASDLESQVL--------DVIGQSRHA 51

Query: 60  --FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
             F+ F ++  K Y S +E  +RF IF  NL+      +   + T G+  F+D T  EF 
Sbjct: 52  LSFARFARRHGKRYRSVDEIRNRFRIFSDNLKLIRSTNRRSLTYTLGVNHFADWTWEEFT 111

Query: 118 RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           R  LG  +        +    L    LP + DWR++G V  VKDQG+CGSCW+FSTTGAL
Sbjct: 112 RHKLGAPQNCSATLKGNHR--LTDAVLPDEKDWRKEGIVSQVKDQGNCGSCWTFSTTGAL 169

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           E A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE
Sbjct: 170 EAAYAQAFGKNISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEE 222

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLD-EDQIAANLVKNGPLAVAIN-AVYMQT 295
            YPYTG D    CKF    +A  V +   ++L  ED++   +    P++VA   A   + 
Sbjct: 223 AYPYTGKD--GVCKFTAKNVAVRVIDSINITLGAEDELKQAVAFVRPVSVAFEVAKDFRF 280

Query: 296 YIGGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Y  GV    IC      ++H VL VGYG            PYWIIKNSWG +WG+NGY+K
Sbjct: 281 YNNGVYTSTICGSTPMDVNHAVLAVGYGVE-------DGVPYWIIKNSWGSNWGDNGYFK 333

Query: 353 ICRGRNVCGVDSMVS 367
           +  G+N+CGV +  S
Sbjct: 334 MELGKNMCGVATCAS 348


>gi|300121328|emb|CBK21708.2| unnamed protein product [Blastocystis hominis]
          Length = 318

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/296 (42%), Positives = 163/296 (55%), Gaps = 20/296 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ +  K+ K YA+ EE  +R  +F  NL +   H   +   T G+ +F+D++  EF  
Sbjct: 21  EFTSYMSKYGKTYAAPEEARYRLRVFNDNLLKIKEHNAKNLPWTLGVNKFADVSAEEFAY 80

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            + G  +    PK           D+PA  DWRE+GAV PVK+QG CGSCW+FSTTG  E
Sbjct: 81  KFCGCAKD---PKTRGTRQTTLVGDVPARVDWREQGAVTPVKNQGMCGSCWAFSTTGTTE 137

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           GA FL TG LVSLSEQQLVDC    DPE     + GC+GG   SA +Y  K  GL  EED
Sbjct: 138 GAYFLKTGNLVSLSEQQLVDCAR--DPEYE---NFGCSGGWPWSAVDYVTKH-GLCTEED 191

Query: 239 YPYTGTDRGHACKFDKSKIAA-SVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
           YPY G D    CK    K+A  SV    +   DED +A  + K  P+++ ++A  MQ Y 
Sbjct: 192 YPYKGVD--AECKESSCKVAVQSVDKVQLPVGDEDSLAVAVSKT-PVSIVLDATAMQLYD 248

Query: 298 GGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            G+     CS  ++H VL VGY       ++     YWIIKNSWG  WGE GY +I
Sbjct: 249 KGIITR--CSESINHAVLAVGYDKDAETGLK-----YWIIKNSWGADWGEEGYCRI 297


>gi|46309423|ref|YP_006313.1| ORF31 [Agrotis segetum granulovirus]
 gi|46200640|gb|AAS82707.1| ORF31 [Agrotis segetum granulovirus]
          Length = 327

 Score =  213 bits (542), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/331 (36%), Positives = 179/331 (54%), Gaps = 33/331 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           +L  +E  F  F +K+NK+Y+S+EE   +F  FK N+R       L  SA + I  +SD+
Sbjct: 17  NLNDSEKLFEDFVQKYNKSYSSEEERQIKFDNFKNNIRSINEKNSLSNSAVYDINFYSDM 76

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPILPTND----------LPADFDWREKGAVGPVKD 161
              E  R   G +  L+   + D +  +  N           LP  FDWR++  +  VK+
Sbjct: 77  NKNELLRKQTGFKINLK-KNNLDLSWNIKCNKKLINGNPAVLLPDSFDWRDRHVITSVKN 135

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           Q  CGSCW+FST   +E    +   KL+ LSEQQLV+CD +         ++GCNGGLM+
Sbjct: 136 QRDCGSCWAFSTIANIESLYAIKYNKLLDLSEQQLVNCDEQ---------NNGCNGGLMH 186

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN 281
            A E  ++ GG+  E D+PYT +D    CK  +  +  +  N  ++S +ED++   L+ N
Sbjct: 187 WAMEEIIRQGGVSNETDFPYTASD--GFCKRKQGFVNINGCNQFILS-NEDRLRELLIFN 243

Query: 282 GPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           GP+++AI+ + +  Y  G+S        L+H VLLVGYG            PYWI+KNSW
Sbjct: 244 GPISIAIDVIDVIDYSQGISSTCRNDNGLNHAVLLVGYGVKN-------NIPYWILKNSW 296

Query: 342 GESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           G  WGENGY+++ R  N CG   M++  AA+
Sbjct: 297 GSQWGENGYFRVQRNINSCG---MINDYAAS 324


>gi|281211531|gb|EFA85693.1| cysteine protease [Polysphondylium pallidum PN500]
          Length = 366

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/340 (37%), Positives = 186/340 (54%), Gaps = 48/340 (14%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F+ +  KF + Y S  E   ++  FK+N+         +      +   +D +P E+++ 
Sbjct: 27  FTDWTHKFQRLY-SNNEFLKKYHTFKSNMDYVHSWNAKNSDTVLELNHLADHSPEEYKKF 85

Query: 120 YLGLRRKLRLPKDADQAPI---LPT--NDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           YLG R K  +  +     I   L T   D  A  DWR+KGAV P+KDQG CGSCWSFSTT
Sbjct: 86  YLGTRVK-HIHFNVQGTHINTQLSTVFEDSGATVDWRKKGAVSPIKDQGQCGSCWSFSTT 144

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G++EGA+ + TG +V LSEQ LVDC            + GCNGGLMN+AF+Y +   G+ 
Sbjct: 145 GSVEGAHQIKTGNMVELSEQNLVDC-------SSAEGNMGCNGGLMNNAFDYIISNHGID 197

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVY- 292
            E+ YPYT  + G  CKF+K+ + A+++++  ++   +   AN VK  GP++VAI+A + 
Sbjct: 198 TEQSYPYTA-NTGSVCKFNKTNVGATISSYKSITPGSETDLANAVKTAGPVSVAIDASHR 256

Query: 293 -MQTYIGGVSCPYICSR-RLDHGVLLVGYGSA----------------------GYAPIR 328
             Q Y  G+   ++CS  RLDHGVL+VGYGS                       G   ++
Sbjct: 257 SFQLYSHGIYYEWLCSSTRLDHGVLVVGYGSGNPPNSDMDHMILKKTAKTDHYHGKKSLK 316

Query: 329 LKE------KPYWIIKNSWGESWGENGYYKICRGR-NVCG 361
           +++      K YWI+KNSW ++WG+ GY  + + R N CG
Sbjct: 317 VEKVDTTSSKNYWIVKNSWSDTWGDKGYIYMSKDRKNNCG 356


>gi|218181|dbj|BAA14402.1| oryzain alpha precursor [Oryza sativa Japonica Group]
          Length = 458

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/321 (38%), Positives = 177/321 (55%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  +   A   ++ +K +  K+Y +  E + R+  F+ NLR    H     + 
Sbjct: 25  IVSYGERSEEE---ARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 81

Query: 102 TH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLGLR K R  +      +   N+ LP   DWR KGAV
Sbjct: 82  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 141

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             +KDQG CGSCW+FS   A+E  N + TG L+SLSEQ+LVDCD         S + GCN
Sbjct: 142 AEIKDQGGCGSCWAFSAIAAVEDINQIVTGDLISLSEQELVDCDT--------SYNEGCN 193

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AF++ +  GG+  E+DYPY G D         +K+  ++ ++  V+ + +    
Sbjct: 194 GGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKV-VTIDSYEDVTPNSETSLQ 252

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V+N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K Y
Sbjct: 253 KAVRNQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGTE-------NGKDY 304

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI++NSWG+SWGE+GY ++ R
Sbjct: 305 WIVRNSWGKSWGESGYVRMER 325


>gi|156397875|ref|XP_001637915.1| predicted protein [Nematostella vectensis]
 gi|156225031|gb|EDO45852.1| predicted protein [Nematostella vectensis]
          Length = 331

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/316 (40%), Positives = 171/316 (54%), Gaps = 23/316 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           ++  +K    K Y ++ E   R  I++ NL++   H +   S    +    D+T  E  +
Sbjct: 28  NWKAWKSFHGKEYPNKNEETMRNFIWQNNLKKIVTHNEGKHSFKLAMNHLGDMTSLEISQ 87

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPA--DFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           T LGL+ K         A  LP  ++      DWR KG V PVK+QG CGSCW+FSTTGA
Sbjct: 88  TLLGLKLKKHAESQPKGATFLPPANVKVVDSIDWRSKGYVTPVKNQGQCGSCWAFSTTGA 147

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LEG +F  TGKLVSLSEQ LVDC  +         ++GC GGLM++AF+Y  + GG+  E
Sbjct: 148 LEGQHFRKTGKLVSLSEQNLVDCSGKYG-------NNGCEGGLMDNAFQYIKENGGIDTE 200

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINA---VY 292
           + YPY   D    C ++KS I A    F  + + DE+ +   L   GP+++AI+A    +
Sbjct: 201 KSYPYLAKDG--VCHYNKSAIGAKDTGFVDIPTGDENALQQALASVGPISIAIDASQSTF 258

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
              + G    P   S RLDHGVL VGYG+          K YW++KNSWG SWGE GY K
Sbjct: 259 HFYHQGVYDDPDCSSTRLDHGVLAVGYGTD-------DGKDYWLVKNSWGPSWGEEGYIK 311

Query: 353 ICRG-RNVCGVDSMVS 367
           I R   + CGV S  S
Sbjct: 312 IARNDHDKCGVASKAS 327


>gi|332326589|gb|AEE42618.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 165/311 (53%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + + Y +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHHRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  +L +LSEQQLV CD +         DSGCNGGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHRLTALSEQQLVSCDDK---------DSGCNGGLMTQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGT--DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           + E+ YPY  +  D        +    A +  +  +   E  +AA L K+GP+++A++A 
Sbjct: 209 LTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC       L+HGVLLVGY   G       E PYW+IKNSWGE WGE G
Sbjct: 269 SFMSYESGVLTSC---AGDALNHGVLLVGYNRTG-------EVPYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVTMGVNAC 329


>gi|125547258|gb|EAY93080.1| hypothetical protein OsI_14881 [Oryza sativa Indica Group]
          Length = 314

 Score =  213 bits (541), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/318 (42%), Positives = 174/318 (54%), Gaps = 34/318 (10%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI-----TQFSDLTPAEFRRTY 120
           K  +AYA   E   R  +F+ N+   A  + ++ +A+         QF+DLT AEFR T 
Sbjct: 11  KHGRAYADDAEKVRRLEVFRDNV---AFIESVNAAASQHKFWLEENQFADLTNAEFRATR 67

Query: 121 LGLR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
            GLR    R  R P     A +  T DLPA  DWR KGAV PVKDQG CG CW+FS   A
Sbjct: 68  TGLRPSSSRGNRAPTSFRYANV-STGDLPASVDWRGKGAVNPVKDQGDCGCCWAFSAVAA 126

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EGA  LATGKLVSLSEQQLV CD + +       D GC GGLM+ AF++ +K GGL  E
Sbjct: 127 MEGAVKLATGKLVSLSEQQLVSCDVKGE-------DQGCEGGLMDDAFDFIIKNGGLAAE 179

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQ 294
            DYPYT +D            AA++  +  V  +++      V N P++VAI+    + Q
Sbjct: 180 SDYPYTASDD-KCATAGAGAAAATIKGYEDVPANDEAALLKAVANQPVSVAIDGGDRHFQ 238

Query: 295 TYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y GGV S    C+  LDH +  VGYG A           YW++KNSWG SWGE+GY ++
Sbjct: 239 FYKGGVLSGAAGCATELDHAITAVGYGVAS------DGTKYWLMKNSWGTSWGEDGYVRM 292

Query: 354 CRG----RNVCGVDSMVS 367
            RG      VCG+  M S
Sbjct: 293 ERGVADKEGVCGLAMMAS 310


>gi|82659048|gb|ABB88697.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/312 (41%), Positives = 167/312 (53%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
           ++E    LA   L +LSEQQLV CD +         D+GC GGLM  AFE+ L+   G +
Sbjct: 158 SIESQWALAGHGLTALSEQQLVSCDDK---------DNGCGGGLMLQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S      A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEDSYPYVSSS-GYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y  GV  SC       L+HGVLLVGY   G       E PYW+IKNSWGE WGEN
Sbjct: 268 SSFMSYQSGVLTSC---AGDALNHGVLLVGYNRTG-------EVPYWVIKNSWGEDWGEN 317

Query: 349 GYYKICRGRNVC 360
           GY ++  G N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|449673497|ref|XP_002169904.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 325

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/316 (40%), Positives = 171/316 (54%), Gaps = 23/316 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  + ++K   NKAY+ + E + R+ I+K N+ R   +     +    +  F D+T  EF
Sbjct: 24  ESSWYVWKMAHNKAYSHESEENVRYAIWKDNMNRITEYNSKSKNVILRMNHFGDMTNTEF 83

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           R    GL   L   ++     +      P   DWR +G V PVK+QG CGSCW+FS+TGA
Sbjct: 84  RAKMNGLL--LHKHQNGSTFLVPSHTAAPDAVDWRSEGYVTPVKNQGQCGSCWAFSSTGA 141

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LEG +F  TG+LVSLSEQ LVDC  +         ++GCNGGLM++AF Y    GG+  E
Sbjct: 142 LEGQHFKKTGRLVSLSEQNLVDCSTDYG-------NNGCNGGLMDNAFSYIKANGGIDTE 194

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVYM-- 293
             YPY G D    C++ KS I A    F  +   DED +   +   GP++VAI+A +M  
Sbjct: 195 TGYPYEGQDG--TCRYSKSSIGADDTGFVDIPEGDEDALKQAVATVGPVSVAIDASHMSF 252

Query: 294 QTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y  GV     CS   LDHGVL+VGYG+          K YW++KNSWG  WG  GY  
Sbjct: 253 QFYHSGVYDEPQCSPSALDHGVLVVGYGTD-------NGKDYWLVKNSWGTGWGTEGYIY 305

Query: 353 ICR-GRNVCGVDSMVS 367
           + R  +N CG+ S  S
Sbjct: 306 MSRNNQNQCGIASKAS 321


>gi|318037269|ref|NP_001187182.1| cathepsin L precursor [Ictalurus punctatus]
 gi|196475596|gb|ACG76367.1| cathepsin L [Ictalurus punctatus]
          Length = 336

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 175/320 (54%), Gaps = 26/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H+  +K+  NK Y  +EE   R  +++ NL++   H        H     +  F D+   
Sbjct: 28  HWQQWKEWHNKDYHEKEE-GWRRMVWEKNLKKIELHNLEHSLGKHSYRLAMNHFGDMPHE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EFR+   G + K+R  + +     +  N L  P+  DWREKG V PVKDQG CGSCW+FS
Sbjct: 87  EFRQVMNGYKHKVRKIRGS---LFMEPNFLEAPSKLDWREKGYVTPVKDQGQCGSCWAFS 143

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGA+EG  F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    GG
Sbjct: 144 TTGAMEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDNGG 196

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           L  E+ YPY GTD    C +D S  AA+   F  + S  E  +   +   GP++VAI+A 
Sbjct: 197 LDTEKFYPYLGTDD-QPCHYDPSYSAANDTGFVDIPSGKEHALMKAVTAVGPVSVAIDAG 255

Query: 292 Y--MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  G+     CS   LDHGVL+VGY   GY    +  K YWI+KNSW E WG  
Sbjct: 256 HESFQFYQSGIYYEADCSSEDLDHGVLVVGY---GYEGENVDGKKYWIVKNSWSEQWGNK 312

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  + + R N CG+ +  S
Sbjct: 313 GYIYMAKDRHNHCGIATAAS 332


>gi|194352752|emb|CAQ00104.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
          Length = 351

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 182/332 (54%), Gaps = 29/332 (8%)

Query: 49  TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI 105
           +  DL   +    LF+K   K  KAYAS EE  HRF +FK NL+      +   S   G+
Sbjct: 30  SEEDLSSHDRLVELFEKWLAKHQKAYASFEEKLHRFEVFKDNLKLIDEINREVTSYWLGL 89

Query: 106 TQFSDLTPAEFRRTYLGLRRKLRLPKDAD--QAPILPTNDLPADFDWREKGAVGPVKDQG 163
            +F+DLT  EF+ TYLGL         +   +   +  +DLP   DWR+KGAV  VK+QG
Sbjct: 90  NEFADLTHDEFKTTYLGLSPPPARRSSSRSFRYENVAAHDLPKAVDWRKKGAVTDVKNQG 149

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCW+FST  A+EG N + TG L +LSEQ+L+DC  +         +SGCNGG+M+ A
Sbjct: 150 QCGSCWAFSTVAAVEGINAIVTGNLTALSEQELIDCSVD--------GNSGCNGGMMDYA 201

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNG 282
           F Y   +GGL  EE YPY   + G      KS+  A S++ +  V   ++Q     + + 
Sbjct: 202 FSYIASSGGLHTEEAYPYL-MEEGSCGDGKKSESEAVSISGYEDVPTKDEQALIKALAHQ 260

Query: 283 PLAVAINAV--YMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
           P++VAI A   + Q Y GGV   P  C  +LDHGV  VGYGS      + K   Y I+KN
Sbjct: 261 PVSVAIEASGRHFQFYSGGVFDGP--CGAQLDHGVAAVGYGSD-----KGKGHDYIIVKN 313

Query: 340 SWGESWGENGYYKICRG----RNVCGVDSMVS 367
           SWG  WGE GY ++ RG      +CG++ M S
Sbjct: 314 SWGGKWGEKGYIRMKRGTGKSEGLCGINKMAS 345


>gi|41688064|dbj|BAD08618.1| cathepsin L preproprotein [Cyprinus carpio]
          Length = 337

 Score =  213 bits (541), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 174/322 (54%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           ++H+  +K    K Y  +EE   R  +++ NL++   H       TH    G+ +F D+T
Sbjct: 26  DNHWEQWKNWHGKKYHEKEE-GWRRMVWEKNLQKIELHNLEHSMGTHTYRLGMNRFGDMT 84

Query: 113 PAEFRRTYLGLRRK--LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+   G + K   R        P     ++P   DWREKG V PVKDQG CGSCW+
Sbjct: 85  HEEFRQVMNGYKHKKERRFRGSLFMEPNFL--EVPNSLDWREKGYVTPVKDQGECGSCWA 142

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTGA+EG  F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    
Sbjct: 143 FSTTGAMEGQMFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDQ 195

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
            GL  EE YPY GTD    C +D    AA+   F  + S  E  +   +   GP++VAI+
Sbjct: 196 NGLDSEESYPYVGTD-DQPCHYDPKYSAANDTGFVDIPSGKEHALMKAIAAVGPVSVAID 254

Query: 290 AVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+     C S  LDHGVL VGYG  G     +  K YWI+KNSW E+WG
Sbjct: 255 AGHESFQFYQSGIYYEKECSSEELDHGVLAVGYGFEG---EDVDGKKYWIVKNSWSENWG 311

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + GY  + + R N CG+ +  S
Sbjct: 312 DKGYVYMAKDRHNHCGIATAAS 333


>gi|348564702|ref|XP_003468143.1| PREDICTED: cathepsin F-like [Cavia porcellus]
          Length = 462

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/315 (42%), Positives = 179/315 (56%), Gaps = 26/315 (8%)

Query: 61  SLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEF 116
           SLFKK    +N+ Y S+EE   R ++F  N+  A + Q LD  +A +G+T+FSDLT  EF
Sbjct: 163 SLFKKFVATYNRTYESKEETQWRLSVFTRNMILAQKIQALDRGTAQYGVTKFSDLTEEEF 222

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           R  YL    +    K   QA I+  +  P ++DWR+KGAV  VK+QG CGSCW+FS TG 
Sbjct: 223 RTIYLNPLLREHPSKTMRQAKIV-HDSAPPEWDWRKKGAVTEVKNQGMCGSCWAFSVTGN 281

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG  FL  G L+SLSEQ+L+DCD           D  C GGL  +A+      GGL  E
Sbjct: 282 VEGQWFLKKGTLLSLSEQELLDCD---------KVDKACMGGLPINAYSAIKSLGGLETE 332

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTY 296
           +DY Y G     AC F   K    + +   +S +E  +AA L   GP+++AINA  MQ Y
Sbjct: 333 DDYSYQG--HMEACNFSAKKAKVYINDSVELSKNEQYLAAWLAVKGPISIAINAFGMQFY 390

Query: 297 IGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
             G++ P   +CS   +DH +L+VGYG       +    P+W IKNSWG  WGE GYY +
Sbjct: 391 RHGIAHPLQPLCSPWFIDHAMLIVGYG-------KRSGVPFWAIKNSWGTDWGEEGYYYL 443

Query: 354 CRGRNVCGVDSMVST 368
            RG   CGV+ M S+
Sbjct: 444 HRGSRSCGVNVMASS 458


>gi|427797099|gb|JAA64001.1| Putative cathepsin l cathepsin l, partial [Rhipicephalus
           pulchellus]
          Length = 331

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/332 (40%), Positives = 181/332 (54%), Gaps = 31/332 (9%)

Query: 49  TNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSATHG 104
           T+ +L+GAE  +S FK    K Y S  E  +R  I+  N  + ARH     K   S    
Sbjct: 14  THEELVGAE--WSAFKALHGKEYESDTEEYYRLKIYMENRLKIARHNEKYAKSQVSYKLA 71

Query: 105 ITQFSDLTPAEFRRTYLGLRRKLR-LPKDAD---QAPILPTNDLPADFDWREKGAVGPVK 160
           + +F D+   EF  T  G +R  R  P++     +   L    LP   DWR+KGAV PVK
Sbjct: 72  MNEFGDMLHHEFVSTRNGFKRNYRDTPREGSFFVEPEGLEDFHLPKTVDWRKKGAVTPVK 131

Query: 161 DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
           +QG CGSCWSFSTTG+LEG +F    KLVSLSEQ L+DC            ++GC GGLM
Sbjct: 132 NQGQCGSCWSFSTTGSLEGQHFRKLHKLVSLSEQNLIDCSRSFG-------NNGCEGGLM 184

Query: 221 NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLV 279
           + AF+Y     G+  E+ YPY  TD    C F+KS + A+   F  +   DE+++   + 
Sbjct: 185 DYAFKYIKANKGIDTEQSYPYNATDG--VCHFNKSAVGATDTGFVDIPEGDENKLKKAVA 242

Query: 280 KNGPLAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
             GP++VAI+A +   Q Y  GV   P   S +LDHGVL+VGYG+          + YW+
Sbjct: 243 TVGPVSVAIDASHESFQFYSEGVYDEPECDSEQLDHGVLVVGYGTK-------DGQDYWL 295

Query: 337 IKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           +KNSWG +WG+ GY  + R + N CG+ S  S
Sbjct: 296 VKNSWGTTWGDGGYIYMSRNKDNQCGIASAAS 327


>gi|151547430|gb|ABS12459.1| cysteine protease Cp [Citrus sinensis]
          Length = 361

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/346 (39%), Positives = 180/346 (52%), Gaps = 33/346 (9%)

Query: 32  IRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           IR V+  G   L   E++   ++G   H   F+ F +++ K Y S EE   RF  F  NL
Sbjct: 34  IRLVSSDG---LRDFETSVLQVIGQARHALSFARFARRYGKIYESVEEMKLRFATFSKNL 90

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
                      S   G+ +F+D +  EF+R  LG  +        +    L  + LP   
Sbjct: 91  DLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHK--LTADVLPETK 148

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWRE G V PVKDQG CGSCW+FSTTG+LE A   A GK +SLSEQQLVDC    +    
Sbjct: 149 DWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFGKGISLSEQQLVDCAQAFN---- 204

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFS 265
              + GCNGGL + AFEY    GGL  EE YPYTG D    CKF    +   V    N +
Sbjct: 205 ---NQGCNGGLPSQAFEYIKYNGGLDTEEAYPYTGKD--GVCKFSSENVGVQVLDSVNIT 259

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAV-YMQTYIGGVSCPYICSRR---LDHGVLLVGYGS 321
           + + DE Q A  LV+  P++VA   V   + Y  GV     C      ++H V+ VGYG 
Sbjct: 260 LGAEDELQHAVGLVR--PVSVAFEVVDGFRFYKSGVYSSTKCGNTPMDVNHAVVAVGYGV 317

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
                      PYW+IKNSWGE+WG++GY+KI  G+N+CG+ +  S
Sbjct: 318 E-------DGVPYWLIKNSWGENWGDHGYFKIKMGKNMCGIATCAS 356


>gi|260516678|gb|ACX43965.1| cysteine protease 1 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 168/311 (54%), Gaps = 31/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRR 118
           F+ F K+++KAY S  E   RF  FKAN+     H  L + S T G+ +F+DL+  EF+ 
Sbjct: 42  FTAFMKQYSKAY-SHAEFSSRFNQFKANVETIRLHNTLANASYTMGLNEFADLSFEEFKG 100

Query: 119 TYLGLR---RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
            Y G +   R+     +  Q         P   DWR   AV P+KDQG CGSCW+FS TG
Sbjct: 101 KYFGYKHVEREFARSNNLHQ----EVEAAPTSIDWRTSNAVTPIKDQGQCGSCWAFSATG 156

Query: 176 ALEGANFLATGK--LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           ++EGA ++  GK  L SLSEQQLVDC            D+GCNGGLM+ AFEY +   G+
Sbjct: 157 SIEGA-WVLQGKHTLTSLSEQQLVDCSTSYG-------DAGCNGGLMDYAFEYIIANKGI 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--V 291
             E  YPY G   G  C+   +K+        V S DE  +   +   GP++VAI A   
Sbjct: 209 CAESAYPYKGV--GGLCQKSCTKVVTISGYKDVASGDEASLLNAVGTVGPVSVAIEADQA 266

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
             Q Y  GV     C   LDHGVL VGYG+ G        + YWI+KNSWG SWGE+GY 
Sbjct: 267 GFQFYSSGVFSG-TCGHNLDHGVLAVGYGTTG-------SQDYWIVKNSWGTSWGESGYI 318

Query: 352 KICRGRNVCGV 362
           ++ R +N CG+
Sbjct: 319 RMIRNKNQCGI 329


>gi|449460678|ref|XP_004148072.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like [Cucumis
           sativus]
          Length = 317

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 180/318 (56%), Gaps = 28/318 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  +  +  K+ + Y S+EE + RFTI++AN++       ++ S T     F+DLT  EF
Sbjct: 16  QDRYQKWMDKYGRQYKSREEWERRFTIYQANVQYIDNFNSMNHSHTLAENNFADLTNEEF 75

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           + TYLG +  + +P    +   +   +LP + DWR++GAV P+K+QG CGSCW+FS   A
Sbjct: 76  KATYLGYK-TVSIPDTCFRYGNMV--NLPTNVDWRQEGAVTPIKNQGQCGSCWAFSAVAA 132

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG N +  GKL+SLSEQ+LVDCD         S + GCNGG M  AFE+ +K  GL  E
Sbjct: 133 VEGINKIKAGKLISLSEQELVDCD-------VTSGNQGCNGGYMYKAFEF-IKRTGLTTE 184

Query: 237 EDYPYTGTDRGHACKFDKSKIA-ASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YM 293
            +YPY G +   AC   K K    S++ +  V +++++     V N P++VAI+A     
Sbjct: 185 IEYPYQGAE--SACNEQKEKYQFVSISGYEKVPVNDEKSLKAAVANQPVSVAIDAEGNNF 242

Query: 294 QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           Q Y GG+     C  +L+HGV +VGYG           + YW++KNSWG  WGE+GY ++
Sbjct: 243 QFYSGGIFSG-NCGNQLNHGVAIVGYG-------ETSNQAYWLVKNSWGTDWGESGYIRM 294

Query: 354 CRG----RNVCGVDSMVS 367
            R     +  CG+  M S
Sbjct: 295 KRDSTDRQGTCGIAMMAS 312


>gi|388509526|gb|AFK42829.1| unknown [Lotus japonicus]
          Length = 333

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/320 (39%), Positives = 175/320 (54%), Gaps = 28/320 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           + H++LFK  F K Y++ EE   R   ++AN+    +H        H    G+  ++DLT
Sbjct: 25  DSHWALFKTTFGKQYSTAEEITRRLA-WEANVAIIRQHNLEHDLGLHTYTLGLNNYADLT 83

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAP-ILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWS 170
            AEF +   GLR      K A++   + P   +LP   DWR KG V P+KDQG CGSCW+
Sbjct: 84  NAEFNQVMNGLRVNASQTKSANRRTYVAPVGVELPTSVDWRTKGYVTPIKDQGQCGSCWA 143

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FS+TG+LEG +F  TG+LVSLSEQ L DC  +         + GCNGGLM+ AF Y  + 
Sbjct: 144 FSSTGSLEGQHFAKTGQLVSLSEQNLTDCSQK-------QGNMGCNGGLMDQAFTYIKEN 196

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAIN 289
            G+  E  YPY   D    C F  + + A+   ++ +   DE+ + + +   GP++VAI+
Sbjct: 197 NGIDTESSYPYKAVDE--KCHFKAADVGATDTGYTDIAQQDENALQSAIATVGPISVAID 254

Query: 290 AVY--MQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G      CS  +LDHGVL VGY S          K Y+I+KNSWG SWG
Sbjct: 255 ASHSSFQLYRSGAYNERACSATQLDHGVLAVGYDSE-------DGKDYYIVKNSWGTSWG 307

Query: 347 ENGYYKICRGR-NVCGVDSM 365
           + GY  + R + N CG+ +M
Sbjct: 308 QKGYIWMTRNKNNQCGIATM 327


>gi|156124996|gb|ABU50816.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 174/323 (53%), Gaps = 31/323 (9%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSATHGITQFSDLT 112
           E  F  FK  F + Y S E   HR +IF+ANL+   RH       D + +  +  F+DL+
Sbjct: 30  EAQFEQFKSTFGRVYPSPEIELHRKSIFRANLQFILRHNIDYFNGDSTFSVSVNNFTDLS 89

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCW 169
             EFR T+ G RR L     AD   +   ND   LPA  DW  KG V P+K+Q  CGSCW
Sbjct: 90  NEEFRATFNGYRR-LAAVSLADS--VHADNDVEALPATVDWTTKGVVTPIKNQQQCGSCW 146

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS   ++EG + L TGKLVSLSEQ LVDC            D GC+GG M+ AF+Y ++
Sbjct: 147 AFSAVASMEGQHALKTGKLVSLSEQNLVDC-------SAAEGDMGCSGGWMDYAFKYVIQ 199

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAI 288
             G+  E  YPY   D   +C+F ++ I A++ +F  V + DE  +   +   GP++VAI
Sbjct: 200 NRGIDTEASYPYKAIDE--SCEFKRNSIGATIHSFVDVKTGDESALQNAVASIGPISVAI 257

Query: 289 NAVY--MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           +A     Q Y  GV     CS   LDHGV  VGYG+       L   PYW +KNSWG SW
Sbjct: 258 DASQPSFQFYSSGVYNEPDCSTEILDHGVTAVGYGT-------LNGVPYWKVKNSWGTSW 310

Query: 346 GENGYYKICRGR-NVCGVDSMVS 367
           G+ GY  + R + N CG+ +  S
Sbjct: 311 GQKGYIFMSRNKQNQCGIATKAS 333


>gi|37780041|gb|AAP32193.1| cysteine protease 14 [Trifolium repens]
          Length = 351

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/316 (38%), Positives = 175/316 (55%), Gaps = 25/316 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  +  K Y + EE   RF +FK NL+      K+  +   G+ +F+DL+  EF+  
Sbjct: 47  FESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDERNKIVSNYWLGLNEFADLSHQEFKNK 106

Query: 120 YLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           YLGL+  L   +++         D  LP   DWR+KGAV PVK+QG CGSCW+FST  A+
Sbjct: 107 YLGLKVNLSQRRESSNEEEFTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAV 166

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG N + TG L SLSEQ+L+DCD         + ++GCNGGLM+ AF + ++ GGL +E+
Sbjct: 167 EGINQIVTGNLTSLSEQELIDCD--------TTYNNGCNGGLMDYAFSFIVQNGGLHKED 218

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQT 295
           DYPY   +     K +++++  ++  +  V  + +Q     + N PL+VAI A     Q 
Sbjct: 219 DYPYIMEESTCEMKKEETQV-VTINGYHDVPQNNEQSLLKALANQPLSVAIEASSRDFQF 277

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           Y GGV   + C   LDHGV  VGYG++       K   Y I+KNSWG  WGE G+ ++ R
Sbjct: 278 YSGGVFDGH-CGSDLDHGVSAVGYGTS-------KNLDYIIVKNSWGAKWGEKGFIRMKR 329

Query: 356 G----RNVCGVDSMVS 367
                  +CG+  M S
Sbjct: 330 NIGKPEGICGLYKMAS 345


>gi|449524070|ref|XP_004169046.1| PREDICTED: KDEL-tailed cysteine endopeptidase CEP1-like, partial
           [Cucumis sativus]
          Length = 314

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 180/318 (56%), Gaps = 28/318 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  +  +  K+ + Y S+EE + RFTI++AN++       ++ S T     F+DLT  EF
Sbjct: 16  QDRYQKWMDKYGRQYKSREEWERRFTIYQANVQYIDNFNSMNHSHTLAENNFADLTNEEF 75

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           + TYLG +  + +P    +   +   +LP + DWR++GAV P+K+QG CGSCW+FS   A
Sbjct: 76  KATYLGYK-TVSIPDTCFRYGNMV--NLPTNVDWRQEGAVTPIKNQGQCGSCWAFSAVAA 132

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG N +  GKL+SLSEQ+LVDCD         S + GCNGG M  AFE+ +K  GL  E
Sbjct: 133 VEGINKIKAGKLISLSEQELVDCD-------VTSGNQGCNGGYMYKAFEF-IKRTGLTTE 184

Query: 237 EDYPYTGTDRGHACKFDKSKIA-ASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YM 293
            +YPY G +   AC   K K    S++ +  V +++++     V N P++VAI+A     
Sbjct: 185 IEYPYQGAE--SACNEQKEKYQFVSISGYEKVPVNDEKSLKAAVANQPVSVAIDAEGNNF 242

Query: 294 QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           Q Y GG+     C  +L+HGV +VGYG           + YW++KNSWG  WGE+GY ++
Sbjct: 243 QFYSGGIFSG-NCGNQLNHGVAIVGYG-------ETSNQAYWLVKNSWGTDWGESGYIRM 294

Query: 354 CR----GRNVCGVDSMVS 367
            R     +  CG+  M S
Sbjct: 295 KRDSTDKQGTCGIAMMAS 312


>gi|302781881|ref|XP_002972714.1| hypothetical protein SELMODRAFT_98707 [Selaginella moellendorffii]
 gi|300159315|gb|EFJ25935.1| hypothetical protein SELMODRAFT_98707 [Selaginella moellendorffii]
          Length = 446

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/334 (38%), Positives = 184/334 (55%), Gaps = 34/334 (10%)

Query: 48  STNNDLLGAEHHFSLFKKKFNKAYASQEE-HDHRFTIFKANLRRAARHQKLDP-SATHGI 105
           S+++DL G    ++ +  KF K  AS     D RF  FK N R    H +    S   G+
Sbjct: 4   SSDSDLSG---EYASWCAKFGKECASSNSLGDRRFETFKENFRYIEEHNRAGKHSYRLGL 60

Query: 106 TQFSDLTPAEFRRTYLGLRRKL------RLPKDADQAPILPTNDLPADFDWREKGAVGPV 159
            QFSDLT  EFR+ +LGLR  L      ++P+D+D        DLPA  DWR+ GAV   
Sbjct: 61  NQFSDLTSEEFRQRFLGLRPDLIDSPVLKMPRDSDIEEGFQNVDLPASVDWRKHGAVTAP 120

Query: 160 KDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           KDQGSCG CW+F+TTGA+EG N + TG+L+SLSEQ+L+DCD +         D GC+GGL
Sbjct: 121 KDQGSCGGCWAFATTGAIEGINQIVTGQLMSLSEQELIDCDKK--------ADKGCDGGL 172

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV 279
           M +A+++ ++ GGL  E DYPY  ++     K   S++ A +  +  +   ++Q     V
Sbjct: 173 MENAYQFIVENGGLDTETDYPYHASESHCNMKKLNSRVVA-IDGYEAIPDGDEQALLRAV 231

Query: 280 KNGPLAVAINAVY--MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWII 337
              P++VAI       Q Y  GV   + C   ++HGVL+VGYG+            YWI+
Sbjct: 232 AKQPVSVAIEGASKDFQHYASGVFTGH-CGEEINHGVLIVGYGTE-------DGLDYWIV 283

Query: 338 KNSWGESWGENGYYKICRGR----NVCGVDSMVS 367
           KNSW  +WG+ G+ K+ R       +C ++++ S
Sbjct: 284 KNSWAATWGDGGFVKMQRNTGKRGGLCSINTLAS 317


>gi|15593249|gb|AAL02221.1|AF410881_1 cysteine protease CP10 precursor [Frankliniella occidentalis]
          Length = 334

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 167/321 (52%), Gaps = 29/321 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA----THGITQFSDLTPA 114
           H+  FK    K YA+  E  +R  +FK N  R A+H  L  S       G +Q++D+   
Sbjct: 27  HWESFKATHAKTYANTVEEAYRAKVFKENAIRIAKHNDLFASGEVTFKVGYSQYADMHTH 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSF 171
           E      G R  L   K A       +ND        DWR KGAV P+KDQG CGSCWSF
Sbjct: 87  EVTEKLNGYRSGL---KQASAFVHTASNDSWPWSKKVDWRSKGAVTPIKDQGQCGSCWSF 143

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S TG+LEG  FL    LVSLSEQ LVDC  +   E       GCNGGLM+SAFEY    G
Sbjct: 144 SATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGNE-------GCNGGLMDSAFEYVESNG 196

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINA 290
           G+  EE YPYT  D G +C +  +  A     +  V +  E  +   + K GP++VAI+A
Sbjct: 197 GIDTEESYPYTAVD-GDSCLYKAANNAGVNTGYKDVQAKSESALRDAVEKAGPVSVAIDA 255

Query: 291 V--YMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
                Q Y  G+     CS   LDHGVL VGYGS          K +WI+KNSWG SWGE
Sbjct: 256 SNWSFQMYSSGIYYESACSSDYLDHGVLAVGYGS------EWPNKEFWIVKNSWGTSWGE 309

Query: 348 NGYYKICRG-RNVCGVDSMVS 367
            GY K+ R  +N CG+ +  S
Sbjct: 310 EGYIKMARNKKNNCGIATEAS 330


>gi|348505824|ref|XP_003440460.1| PREDICTED: pro-cathepsin H-like [Oreochromis niloticus]
          Length = 324

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/320 (39%), Positives = 182/320 (56%), Gaps = 31/320 (9%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E HF  +  ++NK Y + +E+  R  IF  N +R  +H + + S T G+ +FSD+T +EF
Sbjct: 23  EFHFKSWMAQYNKEY-NLKEYYQRLQIFTENKKRIDKHNEGNHSFTMGLNEFSDMTFSEF 81

Query: 117 RRTYLGLRRKLRLPKD--ADQAPILPTNDL-PADFDWREKGA-VGPVKDQGSCGSCWSFS 172
           R+++L     +  P++  A +     +N L P   DWR+KG  V PVK+QG CGSCW+FS
Sbjct: 82  RKSFL-----MSEPQNCSATKGNYFSSNGLLPDSIDWRKKGNYVTPVKNQGGCGSCWTFS 136

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTG LE    +  GKLV LSEQQLVDC  + +       + GCNGGL + AFEY +   G
Sbjct: 137 TTGCLESVTAINKGKLVPLSEQQLVDCAQDFN-------NHGCNGGLPSQAFEYIMYNKG 189

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAV 291
           LM E+DYPYT  +    C +   K AA V +  ++ + +E ++   +  + P++ A    
Sbjct: 190 LMTEQDYPYTAFEG--KCVYKPGKAAAFVNSVVNITAYNELEMVDAVGTHNPVSFAFEVT 247

Query: 292 Y-MQTYIGGVSCPYIC---SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
               +Y  GV     C   + +++H VL VGYG       +    PYWI+KNSWG SWG 
Sbjct: 248 SDFMSYHQGVYTSTECHNTTDKVNHAVLAVGYG-------QENGTPYWIVKNSWGSSWGM 300

Query: 348 NGYYKICRGRNVCGVDSMVS 367
           NGY+ I RG+N+CG+ +  S
Sbjct: 301 NGYFLIERGKNMCGLAACAS 320


>gi|403258371|ref|XP_003921746.1| PREDICTED: pro-cathepsin H [Saimiri boliviensis boliviensis]
          Length = 336

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 172/318 (54%), Gaps = 30/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  +  K +K Y+ +EE+ HR   F +N R+   H   + +    + QF+D++ AE +R
Sbjct: 34  HFKSWMAKHHKTYSREEEYHHRLQTFASNWRKINAHNNGNHTFKMAVNQFADMSFAEIKR 93

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTT 174
            YL        P++        +  T   P   DWR+KG  V PVK+QG+CGSCW+FSTT
Sbjct: 94  KYL-----WSEPQNCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTT 148

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +ATGK++SL+EQQLVDC  + +       + GC GGL + AFEY L   G+M
Sbjct: 149 GALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNKGIM 201

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G D    CKF   K    V + + +++ DED +   +    P++ A      
Sbjct: 202 GEDTYPYQGKDSD--CKFQPGKAIGFVKDVANITIYDEDAMVEAVALYNPVSFAFEVTQD 259

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  G+     C +   +++H VL VGYG            PYWI+KNSWG  WG NG
Sbjct: 260 FMMYKRGIYSSTSCHKTPDKVNHAVLAVGYGEE-------NGIPYWIVKNSWGPQWGMNG 312

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG+N+CG+ +  S
Sbjct: 313 YFLIERGKNMCGLAACAS 330


>gi|340503366|gb|EGR29962.1| hypothetical protein IMG5_145110 [Ichthyophthirius multifiliis]
          Length = 1095

 Score =  212 bits (540), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/285 (38%), Positives = 161/285 (56%), Gaps = 26/285 (9%)

Query: 93   RHQ--KLDPSATHGITQFSDLTPAEFRRTYLGLRRK--LRLPKDAD------QAPILPTN 142
            +HQ  ++  SA  G T+FSDL+P +F + +L L +K  L++ K+        Q  I    
Sbjct: 822  QHQSFQVKNSAVFGHTKFSDLSPQQFAQKHLKLNQKKLLQVKKETKKLTTPIQQDITVEE 881

Query: 143  DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 202
            ++P  FDWR++  V   K Q +CGSCW+FSTTG +E    +   KLV  SEQQLVDCD  
Sbjct: 882  NVPEQFDWRDRNVVTEPKYQNTCGSCWTFSTTGVIESQYAIKHQKLVPFSEQQLVDCD-- 939

Query: 203  CDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVA 262
                     + GC+GGLM  A++Y  ++GGL   EDY     ++   CKFD +K+ A + 
Sbjct: 940  -------DINDGCHGGLMTDAYKYLQQSGGLEFAEDYG-DYKNKKEKCKFDLNKVQAKIK 991

Query: 263  NFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSA 322
             +  +  DE+ I   L +NGP+A  +NA  +Q Y  G+  P  C   ++H +L+VGYG  
Sbjct: 992  EWQQIDEDEEIIKKQLYQNGPIAAGVNARLLQFYKSGIFDPKECDSDINHAILIVGYG-- 1049

Query: 323  GYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
                +    + YWIIKN WG+ WG +GY+K+ RG+  CG+ +  S
Sbjct: 1050 ----VEKDGQKYWIIKNQWGKDWGMDGYFKLARGKKQCGIHTYAS 1090


>gi|148907299|gb|ABR16787.1| unknown [Picea sitchensis]
          Length = 372

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 169/306 (55%), Gaps = 29/306 (9%)

Query: 75  EEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR----RKLRLP 130
           +EH  RF IFK N++      K D     G+ +F+DL+  EF+  ++  +    + LR  
Sbjct: 61  DEHARRFEIFKENVKHIDSVNKKDGPYKLGLNKFADLSNEEFKAMHMTTKMEKHKSLRGD 120

Query: 131 KDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKL 188
           +  +    +  N   LPA  DWR+KGAV PVK+QG CGSCW+FST  ++EG N++ TGKL
Sbjct: 121 RGVESGSFMYQNSKRLPASIDWRKKGAVTPVKNQGQCGSCWAFSTIASVEGINYIKTGKL 180

Query: 189 VSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG-TDRG 247
           VSLSEQQLVDC  E         ++GCNGGLM++AF+Y +  GG++ E++YPYT      
Sbjct: 181 VSLSEQQLVDCSKE---------NAGCNGGLMDNAFQYIIDNGGIVTEDEYPYTAEAGEC 231

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYI 305
              K +   IA  +  F  V  + +      V + P+++AI A     Q Y  GV     
Sbjct: 232 STTKIESKSIATIIDGFEDVPANNEGALKKAVAHQPVSIAIEASGHDFQFYSTGVFTGK- 290

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG----RNVCG 361
           C   LDHGV++VGYG    +P  +    YWI++NSWG  WGE GY ++ RG       CG
Sbjct: 291 CGTELDHGVVVVGYGK---SPEGIN---YWIVRNSWGPEWGEQGYIRMQRGIEATEGKCG 344

Query: 362 VDSMVS 367
           +    S
Sbjct: 345 ISMQAS 350


>gi|185135439|ref|NP_001117777.1| procathepsin L precursor [Oncorhynchus mykiss]
 gi|14582899|gb|AAK69706.1|AF358668_1 procathepsin L [Oncorhynchus mykiss]
          Length = 338

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 135/322 (41%), Positives = 174/322 (54%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           E H+ L+K   +K Y   EE   R  +++ NL++   H        H    G+  F D+T
Sbjct: 27  EDHWHLWKNWHSKHYHESEE-GWRRMVWEKNLKKIEIHNLEHTMGKHSYRLGMNHFGDMT 85

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+T  G ++     +    +  +  N L  P   DWREKG V PVKDQGSCGSCW+
Sbjct: 86  NEEFRQTMNGYKQTTE--RKFKGSLFMEPNYLQAPKAVDWREKGYVTPVKDQGSCGSCWA 143

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTGA+EG  F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    
Sbjct: 144 FSTTGAMEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIQDN 196

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
            GL  EE YPY GTD    C +     AA+   F  + S  E  +   +   GP++VAI+
Sbjct: 197 AGLDTEESYPYVGTDED-PCHYKPEFSAANETGFVDIPSGKEHAMMKAVAAVGPVSVAID 255

Query: 290 AVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+     C S  LDHGVL+VGYG  G     +  K YWI+KNSW E WG
Sbjct: 256 AGHESFQFYESGIYYEKECSSEELDHGVLVVGYGFEG---EDVDGKKYWIVKNSWSEKWG 312

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + GY  + + R N CG+ +  S
Sbjct: 313 DKGYIYMAKDRKNHCGIATASS 334


>gi|449683741|ref|XP_002155462.2| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 169/314 (53%), Gaps = 32/314 (10%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR--RTY 120
           +K   NKAY+   E   R+TI+K N RR   H          + QF D+T  EF+    Y
Sbjct: 30  WKMAHNKAYSHDGEETVRYTIWKDNERRIREHNLQGGDFLLEMNQFGDMTNNEFKDFNGY 89

Query: 121 LGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           L         K    +  L  N    P   DWR +G V PVKDQG CGSCW+FSTTG+LE
Sbjct: 90  LS-------HKHVSGSTFLTPNSFVAPDSVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLE 142

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G NF  TGKLVSLSEQ LVDC            ++GCNGGLM++AF Y  +  G+  E  
Sbjct: 143 GQNFKKTGKLVSLSEQNLVDC-------STAYGNNGCNGGLMDNAFTYIKENNGIDSEAS 195

Query: 239 YPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY--MQT 295
           YPYT  D    C F K  +AA+   F  + S DE+++   +   GP++VAI+A +   Q 
Sbjct: 196 YPYTAKD--GKCAFTKPNVAATDTGFVDIPSGDENKLKEAVASVGPISVAIDASHFSFQF 253

Query: 296 YIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y  GV     CS   LDHGVL+VGYG+          K YW++KNSW  SWG+ GY K+ 
Sbjct: 254 YRKGVYNERKCSSTELDHGVLVVGYGTE-------SGKDYWLVKNSWNTSWGDKGYIKMS 306

Query: 355 R-GRNVCGVDSMVS 367
           R  +N CG+ +  S
Sbjct: 307 RNAKNQCGIATNAS 320


>gi|225428328|ref|XP_002279940.1| PREDICTED: cysteine proteinase-like [Vitis vinifera]
          Length = 707

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 175/317 (55%), Gaps = 28/317 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  K  K Y S EE  HRF +F+ NL       K   S   G+ +F+DL+  EF+  
Sbjct: 404 FESWVSKHGKVYKSMEEKLHRFEVFRENLNHIDERNKEVSSYWLGLNEFADLSHEEFKSK 463

Query: 120 YLGLRRKLRLPKD-ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           YLGLR +    +D + +       DLP   DWR+KGAV  VK+QG+CGSCW+FST  A+E
Sbjct: 464 YLGLRAEFPRSRDYSGEFRYRDVADLPESVDWRKKGAVTHVKNQGACGSCWAFSTVAAVE 523

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G N + TG L +LSEQ+L+DCD         + +SGCNGGLM+ AF +    GGL +E+D
Sbjct: 524 GINQIVTGNLTTLSEQELIDCD--------TTFNSGCNGGLMDYAFAFIASNGGLHKEDD 575

Query: 239 YPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQT 295
           YPY   + G  C+  K  +   +++ +  V   +++     + + PL+VAI A     Q 
Sbjct: 576 YPYL-MEEG-TCEEQKEDVDIVTISGYEDVPEKDEESLLKALAHQPLSVAIEASGRDFQF 633

Query: 296 YIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y GGV + P  C   LDHGV  VGYGS+       K   Y I+KNSWG  WGE GY ++ 
Sbjct: 634 YSGGVFNGP--CGTELDHGVAAVGYGSS-------KGLDYIIVKNSWGPKWGEKGYIRMK 684

Query: 355 RG----RNVCGVDSMVS 367
           R       +CG++ M S
Sbjct: 685 RNTGKTEGLCGINKMAS 701


>gi|343472974|emb|CCD15016.1| unnamed protein product [Trypanosoma congolense IL3000]
          Length = 361

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/310 (38%), Positives = 165/310 (53%), Gaps = 21/310 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F+ FK+K++++Y    E   RF +FK N+ RA      +P AT G+T+FSD++P EF
Sbjct: 38  QQQFAAFKQKYSRSYKDATEEAFRFRVFKQNMERAKEEAAANPYATFGVTRFSDMSPEEF 97

Query: 117 RRTYL-GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           R TY  G        K   +   + T   P   DWR+KGAV PVKDQG C S W+FS TG
Sbjct: 98  RATYHNGAEYYAAALKRPRKVVNVSTGRPPMTVDWRKKGAVTPVKDQGKCDSSWAFSATG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   +A  +L SLSEQ LV CD +         D GC  G  + AF + + +  G +
Sbjct: 158 NIEGQWKVAGHELTSLSEQMLVSCDTD---------DLGCRDGFPDIAFNWIVSSNKGNV 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY +G      C      + A + +   ++ DED IA  L + GP A+ ++A  
Sbjct: 209 FTEQSYPYASGGGNVPTCDKSGKVVGAKIRDHVDLARDEDMIAEWLARKGPAAITVDATS 268

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q Y GGV    I S+ ++   LLVGY           + PYWIIKNSWG+ WGE GY +
Sbjct: 269 FQRYTGGVLTSCI-SKEMNSAALLVGYDDT-------SKPPYWIIKNSWGKGWGEEGYIR 320

Query: 353 ICRGRNVCGV 362
           I +G N C V
Sbjct: 321 IEKGTNQCLV 330


>gi|226443040|ref|NP_001140018.1| Cathepsin L1 precursor [Salmo salar]
 gi|221221188|gb|ACM09255.1| Cathepsin L1 precursor [Salmo salar]
          Length = 338

 Score =  212 bits (539), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 174/322 (54%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           E H+ L+K   +K+Y   EE   R  +++ NL++   H        H    G+  F D+T
Sbjct: 27  EDHWHLWKNWHSKSYHESEE-GWRRMVWEKNLKKIEMHNLEHTMGKHSYRLGMNHFGDMT 85

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+T  G ++     +    +  +  N L  P   DWREKG V PVKDQGSCGSCW+
Sbjct: 86  NEEFRQTMNGYKQTTE--RKFKGSLFMEPNYLQAPKAVDWREKGYVTPVKDQGSCGSCWA 143

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTGA+EG  F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    
Sbjct: 144 FSTTGAMEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIQDN 196

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
            GL  EE YPY GTD    C +      A+   F  + S  E  +   +   GP++VAI+
Sbjct: 197 AGLDTEESYPYVGTDED-PCHYKPEFSGANETGFVDIPSGKEHAMMKAVAAVGPVSVAID 255

Query: 290 AVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+     C S  LDHGVL+VGYG  G     +  K YWI+KNSW E WG
Sbjct: 256 AGHESFQFYESGIYYEKECSSEELDHGVLVVGYGFEG---EDVDGKKYWIVKNSWSEKWG 312

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + GY  + + R N CG+ +  S
Sbjct: 313 DKGYIYMAKDRKNHCGIATASS 334


>gi|332375975|gb|AEE63128.1| unknown [Dendroctonus ponderosae]
          Length = 338

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/328 (40%), Positives = 178/328 (54%), Gaps = 32/328 (9%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDL 111
            +  ++ FK +  K Y S+ E   R  IF  N  + A+H KL     +     + ++ DL
Sbjct: 23  VQEQWNSFKVQHKKQYESETEERFRMKIFMDNSHKVAKHNKLFEQGLYPYKLAMNKYGDL 82

Query: 112 TPAEFRRTYLGLRR-KLRLPKDADQAPIL---PTN-DLPADFDWREKGAVGPVKDQGSCG 166
              EF     G  R K  L +   Q  I    P + D+P   DWR++GAV PVKDQG CG
Sbjct: 83  LHHEFVGLLNGFNRTKTYLKRGELQDSITFIEPAHVDIPDTVDWRQEGAVTPVKDQGHCG 142

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCWSFS TGALEG +F  T KLVSLSEQ LVDC            ++GCNGGLM++AF Y
Sbjct: 143 SCWSFSATGALEGQHFRQTKKLVSLSEQNLVDCSSRFG-------NNGCNGGLMDNAFRY 195

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFD---KSKIAASVANFSVVSLDEDQIAANLVKNGP 283
               GG+  E  YPY G D     KF    K++ A       + S DED++ A +   GP
Sbjct: 196 IKNNGGIDTEAAYPYMGEDE----KFRYSAKNRGATDKGFVDIPSGDEDKLKAAVATVGP 251

Query: 284 LAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           +++AI+A +   Q Y  GV S P   S  LDHGVL+VGYG+     +      YW++KNS
Sbjct: 252 ISIAIDASHESFQLYSNGVYSDPTCSSTELDHGVLVVGYGTDEKTGM-----DYWLVKNS 306

Query: 341 WGESWGENGYYKICRGR-NVCGVDSMVS 367
           WG++WG +GY K+ R + N CGV +  S
Sbjct: 307 WGDTWGLDGYIKMARNQDNQCGVATQAS 334


>gi|344953542|gb|AEN28617.1| cathepsin L-like cysteine protease [Epinephelus coioides]
          Length = 336

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 175/320 (54%), Gaps = 25/320 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H+ L+K   +K Y  +EE   R  +++ NL++   H       TH    G+  F D+T  
Sbjct: 27  HWELWKSWHSKKYHEKEE-GWRRMVWEKNLKKIELHNLEHSMGTHSYRLGMNHFGDMTHE 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EFR+   G +RK      A  +  L  N L  P   DWR+ G V PVKDQG CGSCW+FS
Sbjct: 86  EFRQLMNGYKRKAET--KARGSLFLEPNFLEAPKSVDWRDNGYVTPVKDQGQCGSCWAFS 143

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGALEG +F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y     G
Sbjct: 144 TTGALEGQHFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYVKDNQG 196

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           L  E+ YPY GTD    C +D +  + +   F  + S  E  +   +   GP++VAI+A 
Sbjct: 197 LDSEDSYPYLGTDD-QPCHYDPTYNSVNDTGFVDIPSGKERALMKAVAAVGPVSVAIDAG 255

Query: 292 Y--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  G+     C S  LDHGVL+VGYG  G     +  K YWI+KNSW E WG+ 
Sbjct: 256 HESFQFYQSGIYYEKECSSEELDHGVLVVGYGFQG---EDVDGKKYWIVKNSWSEKWGDK 312

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  + + R N CG+ +  S
Sbjct: 313 GYIYMAKDRKNHCGIATAAS 332


>gi|297598407|ref|NP_001045533.2| Os01g0971400 [Oryza sativa Japonica Group]
 gi|15289977|dbj|BAB63672.1| putative cysteine protease CP1 [Oryza sativa Japonica Group]
 gi|125529282|gb|EAY77396.1| hypothetical protein OsI_05384 [Oryza sativa Indica Group]
 gi|125573472|gb|EAZ14987.1| hypothetical protein OsJ_04922 [Oryza sativa Japonica Group]
 gi|215740756|dbj|BAG97412.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215741010|dbj|BAG97505.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215765325|dbj|BAG87022.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215767338|dbj|BAG99566.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255674119|dbj|BAF07447.2| Os01g0971400 [Oryza sativa Japonica Group]
          Length = 365

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/338 (39%), Positives = 179/338 (52%), Gaps = 35/338 (10%)

Query: 49  TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI 105
           +  DL   E    LF+K   K+ KAY+S EE   RF +FK NL       K       G+
Sbjct: 38  SEEDLASHERLMELFEKFMAKYRKAYSSLEEKLRRFEVFKDNLNHIDEENKKITGYWLGL 97

Query: 106 TQFSDLTPAEFRRTYLGLRRKLRLPKDADQA---PILPTNDLPADFDWREKGAVGPVKDQ 162
            +F+DLT  EF+  YLGL          DQ      +    LP + DWR+KGAV  VK+Q
Sbjct: 98  NEFADLTHDEFKAAYLGLTLTPARRNSNDQLFRYEEVEAASLPKEVDWRKKGAVTEVKNQ 157

Query: 163 GSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNS 222
           G CGSCW+FST  A+EG N + TG L  LSEQ+L+DCD +         ++GC+GGLM+ 
Sbjct: 158 GQCGSCWAFSTVAAVEGINAIVTGNLTRLSEQELIDCDTD--------GNNGCSGGLMDY 209

Query: 223 AFEYTLKAGGLMREEDYPY---TGTDRGHACKFD---KSKIAASVANFSVVSLDEDQIAA 276
           AF Y    GGL  EE YPY    GT R  + + D   ++  A +++ +  V  + +Q   
Sbjct: 210 AFSYIAANGGLHTEESYPYLMEEGTCRRGSTEGDDDGEAAAAVTISGYEDVPRNNEQALL 269

Query: 277 NLVKNGPLAVAINAV--YMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKP 333
             + + P++VAI A     Q Y GGV   P  C  RLDHGV  VGYG+A       K   
Sbjct: 270 KALAHQPVSVAIEASGRNFQFYSGGVFDGP--CGTRLDHGVTAVGYGTAS------KGHD 321

Query: 334 YWIIKNSWGESWGENGYYKICRGR----NVCGVDSMVS 367
           Y I+KNSWG  WGE GY ++ RG      +CG++ M S
Sbjct: 322 YIIVKNSWGSHWGEKGYIRMRRGTGKHDGLCGINKMAS 359


>gi|156124998|gb|ABU50817.1| Ale o 1 allergen [Aleuroglyphus ovatus]
          Length = 337

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/323 (40%), Positives = 173/323 (53%), Gaps = 31/323 (9%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSATHGITQFSDLT 112
           E  F  FK  F + Y S E   HR +IF+ANL+   RH       D + +  +  F+DL+
Sbjct: 30  EAQFEQFKSTFGRVYPSPEIELHRKSIFRANLQFILRHNIDYFNGDSTFSVSVNNFTDLS 89

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCW 169
             EFR T+ G RR L     AD   +   ND   LPA  DW  KG V P+K+Q  CGSCW
Sbjct: 90  NEEFRATFNGYRR-LAAVSLADS--VHADNDVEALPATVDWTTKGVVTPIKNQQQCGSCW 146

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS   ++EG + L TGKLVSLSEQ LVDC            D GC+GG M+ AF+Y ++
Sbjct: 147 AFSAVASMEGQHALKTGKLVSLSEQNLVDC-------SAAEGDMGCSGGWMDYAFKYVIQ 199

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAI 288
             G+  E  YPY   D   +C+F ++ + A++ +F  V + DE  +   +   GP++VAI
Sbjct: 200 NRGIDTEASYPYKAIDE--SCEFKRNSVGATIHSFVDVKTGDESALQNAVASIGPISVAI 257

Query: 289 NAVY--MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           +A     Q Y  GV     CS   LDHGV  VGYG+       L   PYW +KNSWG SW
Sbjct: 258 DAAQPSFQFYSSGVYNEPDCSTEILDHGVTAVGYGT-------LNGAPYWKVKNSWGTSW 310

Query: 346 GENGYYKICRGR-NVCGVDSMVS 367
           G  GY  + R + N CG+ +  S
Sbjct: 311 GRKGYIFMSRNKQNQCGIATKAS 333


>gi|332326585|gb|AEE42616.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/311 (40%), Positives = 165/311 (53%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKBQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKBQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +E    +A  +L  LSEQQLV CD +         DSGC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHRLXXLSEQQLVSCDDK---------DSGCXGGLMTQAFEWLLRXMNGTM 208

Query: 234 MREEDYPYTGT--DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPY  +  D        +    A +  + ++  +E  +AA L K+GP+++ ++A 
Sbjct: 209 FTEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIESNETVMAAWLAKSGPISIGVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC     + L+HGVLLVGY   G       E PYW+IKNSWGE WGE G
Sbjct: 269 SFMSYESGVLTSC---AGKHLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVTMGVNAC 329


>gi|238816977|gb|ACR56863.1| cathepsin L-like cysteine proteinase [Delia coarctata]
          Length = 338

 Score =  212 bits (539), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/318 (40%), Positives = 179/318 (56%), Gaps = 30/318 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLTPAE 115
           +  FK +  K Y S+ E   R  IF  N  + A+H +L      S   G+ +++D+   E
Sbjct: 27  WQTFKMEHRKNYLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYADMLHHE 86

Query: 116 FRRTYLG----LRRKLRLPKDADQAP-ILPTN-DLPADFDWREKGAVGPVKDQGSCGSCW 169
           F+ T  G    +R++LR  +  +    I P N  +P   DWR+ GAV  VKDQG CGSCW
Sbjct: 87  FKETMNGYNHTMRKELRAQEGFNGITYISPANVQVPKAVDWRQHGAVTSVKDQGHCGSCW 146

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           SFS+TG+LEG +F   G LVSLSEQ LVDC  +         ++GCNGGLM++AF Y   
Sbjct: 147 SFSSTGSLEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKD 199

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAI 288
            GG+  E+ YPY G D   +C F+K+ + A+   F  +   DE+ +   +   GP+AVAI
Sbjct: 200 NGGVDTEKSYPYEGIDD--SCHFNKATVGATDTGFVDIPQGDEEAMMKAVATMGPVAVAI 257

Query: 289 NAV--YMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           +A     Q Y  GV + P   S  LDHGVL+VGYG+          + YW++KNSWG +W
Sbjct: 258 DASNESFQLYSEGVYNDPNCSSDNLDHGVLVVGYGT------DKDGQDYWLVKNSWGTTW 311

Query: 346 GENGYYKICRGR-NVCGV 362
           G+ GY K+ R + N CG+
Sbjct: 312 GDQGYIKMARNQDNQCGI 329


>gi|357158628|ref|XP_003578189.1| PREDICTED: thiol protease aleurain-like [Brachypodium distachyon]
          Length = 363

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 140/347 (40%), Positives = 178/347 (51%), Gaps = 32/347 (9%)

Query: 31  LIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTIFKAN 87
           LIR VT+     L   EST    LG   H   F+ F  ++ K+Y S  E   RF IF  +
Sbjct: 33  LIRPVTERAATAL---ESTIVAALGRSRHALRFARFAVRYGKSYESAAEVQRRFRIFSES 89

Query: 88  LRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPAD 147
           L       +   S   GI ++SD++  EF+ + LG  +        +   +   N LP  
Sbjct: 90  LEEVRSTNQKGLSYRLGINRYSDMSWEEFQASRLGAAQTCSATLRGNHR-MQDANALPET 148

Query: 148 FDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEE 207
            DWRE G V PVKDQ  CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC    +   
Sbjct: 149 KDWREDGIVSPVKDQSHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGAYN--- 205

Query: 208 PGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANF 264
               + GCNGGL + AFEY    GGL  EE YPY G +    C +     A  V    N 
Sbjct: 206 ----NFGCNGGLPSQAFEYIKYNGGLDTEESYPYKGVN--GVCHYKPENAAVQVLDSVNI 259

Query: 265 SVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRRLD---HGVLLVGYG 320
           ++ + DE Q A  LV+  P++VA   +   + Y  GV     C    D   H VL VGYG
Sbjct: 260 TLNAEDELQNAVGLVR--PVSVAFEVINGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYG 317

Query: 321 SAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
                       PYW+IKNSWGESWG+ GY+K+ RG+N+C V +  S
Sbjct: 318 VE-------NGTPYWLIKNSWGESWGDKGYFKMERGKNMCAVATCAS 357


>gi|281200606|gb|EFA74824.1| cysteine proteinase 5 precursor [Polysphondylium pallidum PN500]
          Length = 307

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 178/312 (57%), Gaps = 17/312 (5%)

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR-RK 126
           ++ Y +QE    RF IFK N+    +      S   G+   +D++  E++R YLG     
Sbjct: 5   DRQYTAQE-FGTRFNIFKKNMDFVHKWNAKGSSTVLGLNSMADISNEEYQRVYLGTHIDA 63

Query: 127 LRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
            +  + A    +  T  +  A+ DWR KGAV P+K+QG CGSCWSFSTTG+ EGA+F+ T
Sbjct: 64  SQFRQQAASHKLGRTFKVQAANVDWRAKGAVTPIKNQGQCGSCWSFSTTGSTEGAHFIKT 123

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           G LVSLSEQ L+DC     PE     + GCNGGLM +AFEY +K  G+  E  YPY   D
Sbjct: 124 GNLVSLSEQNLMDCS---KPEG----NQGCNGGLMTAAFEYIIKNNGIDTESSYPYKAED 176

Query: 246 RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCP 303
            G  C ++ +  AA+++++  V+   +   A     GP++VAI+A +   Q Y  GV   
Sbjct: 177 -GKKCLYNPANSAATLSSYVNVTTGSESDLAVKSGLGPVSVAIDASHNSFQLYSSGVYYE 235

Query: 304 YICSR-RLDHGVLLVGYGSAGY--APIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NV 359
             CS+ +LDHGVL+VGYGS     A +      +WI+KNSWG +WG  GY  + R R N 
Sbjct: 236 PKCSQTQLDHGVLVVGYGSDALPSAGVSAGSGDWWIVKNSWGTTWGVEGYIYMSRNRNNN 295

Query: 360 CGVDSMVSTVAA 371
           CG+ +M S  +A
Sbjct: 296 CGIATMASLPSA 307


>gi|332326583|gb|AEE42615.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 164/311 (52%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + + Y +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHHRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  +L  LSEQQLV CD +         DSGCNGGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVADHRLXXLSEQQLVSCDDK---------DSGCNGGLMTQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGT--DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           + E+ YPY  +  D        +    A +  +  +   E  +AA L K+GP+++A++A 
Sbjct: 209 LTEDSYPYVSSTGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIAVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC       L+HGVLLVGY   G       E PYW+IKNSWGE WGE G
Sbjct: 269 SFMSYESGVLTSC---AGDALNHGVLLVGYNRTG-------EVPYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVTMGVNAC 329


>gi|40806498|gb|AAR92154.1| putative cysteine protease 1 [Iris x hollandica]
          Length = 340

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/303 (40%), Positives = 161/303 (53%), Gaps = 30/303 (9%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLR 128
           + Y +  E  HRF IF+AN+ R       +     G+ QF+DLT  EF+      R  L+
Sbjct: 50  RVYKNAAEKAHRFEIFRANVERIESFNAENHKFKLGVNQFADLTNEEFK-----TRNTLK 104

Query: 129 LPKDADQAPILPTN--DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATG 186
             K A        N   +PA  DWR KGAV P+KDQG CGSCW+FS   A EG   L+TG
Sbjct: 105 PSKMASTKSFKYENVTAVPATMDWRTKGAVTPIKDQGQCGSCWAFSAVAATEGITKLSTG 164

Query: 187 KLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDR 246
           KL+SLSEQ++VDCD   D       D GCNGG M+ AFEY +K  G+  E +YPY   D 
Sbjct: 165 KLISLSEQEVVDCDVTSD-------DQGCNGGEMDDAFEYIIKNKGITTEANYPYKAAD- 216

Query: 247 GHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCP 303
              C   K+   AAS+  +  V+++ +        N P+AVAI+A     Q Y  GV   
Sbjct: 217 -GTCNTKKAASHAASITGYEDVTVNSEAALLKAAANQPIAVAIDAGDFAFQMYSSGVFTG 275

Query: 304 YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR----GRNV 359
             C   LDHGV LVGYG+            YW++KNSWG SWGE+GY ++ R       +
Sbjct: 276 -DCGTDLDHGVTLVGYGATSDGT------KYWLVKNSWGTSWGEDGYIRMERDVDAKEGL 328

Query: 360 CGV 362
           CG+
Sbjct: 329 CGI 331


>gi|410519429|gb|AFV73398.1| cathepsin L [Haliotis discus hannai]
          Length = 326

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/320 (38%), Positives = 169/320 (52%), Gaps = 25/320 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           +  + +FK + NK Y   +E  +R  +F   +    +H        H    GI +++D+ 
Sbjct: 19  DREWGMFKVRHNKQYKDNQEEAYRKGVFMKAVEYIQQHNLEADRGVHSFRVGINEYADMP 78

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EF R   G + + + PK     P     DLPA  DWR KG V  VK+QG CGSCW+FS
Sbjct: 79  NEEFVRVMNGYKMQEQRPKAPTYMPPSNVGDLPATVDWRTKGYVTEVKNQGQCGSCWAFS 138

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           +TG+LEG  F    KL+SLSEQ LVDC  E         + GC GGLM+ AF Y     G
Sbjct: 139 STGSLEGQTFKKYNKLISLSEQNLVDCSTE-------QGNMGCGGGLMDQAFTYIKVNDG 191

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E  YPY        C+F+K+ + A+   ++ + S  E  + + +   GP+AVAI+A 
Sbjct: 192 IDTETSYPYEAAS--GKCRFNKANVGANDTGYTDIKSKSESDLQSAVATVGPIAVAIDAS 249

Query: 292 YM--QTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +M  Q Y  GV     CS+ RLDHGVL VGYG+          K YW++KNSWG +WG+ 
Sbjct: 250 HMSFQLYKSGVYHYIFCSQTRLDHGVLAVGYGTD-------SGKDYWLVKNSWGATWGQQ 302

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  + R R N CG+ +  S
Sbjct: 303 GYIMMSRNRDNNCGIATQAS 322


>gi|225719768|gb|ACO15730.1| Cathepsin L1 precursor [Caligus clemensi]
          Length = 338

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 135/322 (41%), Positives = 175/322 (54%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           E H+ L+K   +K Y + EE   R  +++ NL++   H        H    G+  F D+T
Sbjct: 27  EDHWHLWKNWHSKNYHASEE-GWRRMVWEKNLKKIEIHNLEHTMGKHSHRLGMNHFGDMT 85

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+T  G ++     +    +  +  N L  P   DWREKG V PVKDQGSCGSCW+
Sbjct: 86  NEEFRQTMNGYKQTTE--RKFKGSLFMEPNYLQAPKAVDWREKGYVTPVKDQGSCGSCWA 143

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTGA+EG  F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    
Sbjct: 144 FSTTGAMEGQPFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIQDN 196

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
            GL  EE YPY GTD    C +     AA+   F  + S  E  +   +   GP++VAI+
Sbjct: 197 AGLDTEESYPYVGTDED-PCHYKPEFSAANETGFVDIPSGKEHAMMKAVAAVGPVSVAID 255

Query: 290 AVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+     C S  LDHGVL+VGYG  G     +  K YWI+KNSW E WG
Sbjct: 256 AGHESFQFYESGIYYEKECSSEELDHGVLVVGYGFEG---EDVDGKKYWIVKNSWSEKWG 312

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + GY  + + R N CG+ +  S
Sbjct: 313 DKGYIYMAKDRKNHCGIATASS 334


>gi|255635584|gb|ACU18142.1| unknown [Glycine max]
          Length = 345

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/297 (40%), Positives = 166/297 (55%), Gaps = 21/297 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  K  K Y S EE   RF IFK NL+      K+  +   G+ +F+DL+  EF+  
Sbjct: 47  FESWMSKHGKIYQSIEEKLLRFEIFKDNLKHIDERNKVVSNYWLGLNEFADLSHQEFKNK 106

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           YLGL+      +++ +       +LP   DWR+KGAV PVK+QGSCGSCW+FST  A+EG
Sbjct: 107 YLGLKVDYSRRRESPEEFTYKDVELPKSVDWRKKGAVAPVKNQGSCGSCWAFSTVAAVEG 166

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
            N + TG L SLSEQ+L+DCD         +  +GCNGGLM+ AF + ++ GGL +EEDY
Sbjct: 167 INQIVTGNLTSLSEQELIDCDR--------TYSNGCNGGLMDYAFSFIVENGGLHKEEDY 218

Query: 240 PYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTY 296
           PY   +    C+  K +    +++ +  V  + +Q     + N  L+VAI A     Q Y
Sbjct: 219 PYIMEE--GTCEMTKEETEVVTISGYHDVPQNNEQSLLKALANQSLSVAIEASGRDFQFY 276

Query: 297 IGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            GGV   + C   LDHGV  VGYG+A       K   Y I+KNSWG  WGE GY ++
Sbjct: 277 SGGVFDGH-CGSDLDHGVAAVGYGTA-------KGVDYIIVKNSWGSKWGEKGYIRM 325


>gi|2352469|gb|AAC00067.1| cysteine protease [Trypanosoma cruzi]
          Length = 471

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/314 (40%), Positives = 167/314 (53%), Gaps = 23/314 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S        ++F+ NL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYESAARR-LPLSVFRENLFLARLHAAANPHATFGVTPFSDLTREEFRS 95

Query: 119 TYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y          ++  + P+ +     PA  DWR +GAV  VKDQG CGSCW+FS  G +
Sbjct: 96  RYHNGAAHFAAAQERARVPVKVEVVGAPAAVDWRARGAVTAVKDQGQCGSCWAFSAIGNV 155

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E   FLA   L +LSEQ LV CD           D GC+GGLMN+AFE+ ++   G +  
Sbjct: 156 ECQWFLAGHPLTNLSEQMLVSCDKT---------DFGCSGGLMNNAFEWIVQENNGAVYT 206

Query: 236 EEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
           E+ YPY +G      C      + A++     +  DE QIAA +  NGP+AVA++A    
Sbjct: 207 EDSYPYASGEGISPPCTTSGHTVGATITGHVELPQDEAQIAACVAVNGPVAVAVDASSWM 266

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           TY GGV    + S +LDHGVLLVGY  +          PYWIIKNSW  + GE GY +I 
Sbjct: 267 TYTGGVMTSCV-SEQLDHGVLLVGYNDSAAV-------PYWIIKNSW-TTQGEEGYIRIA 317

Query: 355 RGRNVCGVDSMVST 368
           +G N C V    S+
Sbjct: 318 KGSNQCLVKEEASS 331


>gi|66735056|gb|AAY53767.1| cysteine protease [Saprolegnia parasitica]
          Length = 523

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/306 (41%), Positives = 167/306 (54%), Gaps = 29/306 (9%)

Query: 79  HRFTIFKANLRRAARHQK-LDPSATHGITQFSDLTPAEFRRTYLGLRRKLRL----PKDA 133
           HRF +F  N +R   H K    S T G  ++S LT  EF++   GLR          K A
Sbjct: 46  HRFEVFILNDQRIEAHNKDASSSFTMGHNEYSHLTFDEFKKLRTGLRVSPSYIQSRAKYA 105

Query: 134 DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSE 193
             AP +   D+P + DW E+G V PVK+QG CGSCW+FSTTGA+EGA F+++ +LVS+SE
Sbjct: 106 LMAPAVNMTDVPNEMDWVEQGGVTPVKNQGMCGSCWAFSTTGAIEGAAFVSSKQLVSVSE 165

Query: 194 QQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD 253
           Q+LVDCDH        + D GCNGGLM++AF++     GL +EEDYPY   +    C   
Sbjct: 166 QELVDCDH--------NGDMGCNGGLMDNAFKWVKTHKGLCKEEDYPYHAKEG--TCALK 215

Query: 254 KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLD 311
           K K    V  F  V  +++Q     V   P++VAI A     Q Y  GV     C  +LD
Sbjct: 216 KCKPVTKVTAFHDVPANDEQALKAAVAKQPVSVAIEADQPEFQFYKSGV-FDKSCGTKLD 274

Query: 312 HGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR----GRNVCGVDSMVS 367
           HGVL+VGYG  G        K YW +KNSWG  WG+ GY K+ R        CGV  + S
Sbjct: 275 HGVLVVGYGEEG-------GKKYWKVKNSWGADWGDKGYIKLAREFGPETGQCGVAMVPS 327

Query: 368 TVAAAV 373
              A++
Sbjct: 328 YPTASI 333


>gi|394331820|gb|AFN27129.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 168/311 (54%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
           ++E    LA  +L +LSEQQLV CD +         D+GC GGLM  AFE+ L+   G +
Sbjct: 158 SIESQWALAGHRLTALSEQQLVSCDDK---------DNGCRGGLMLQAFEWLLRNMNGTM 208

Query: 234 MREEDYPY-TGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPY + T     C      +  A +  +  +   E  +AA L KNGP+++A++A 
Sbjct: 209 FTEDSYPYVSSTGYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC  +    L+HGVLLV Y   G       E PYW+IKNSWGE+WGENG
Sbjct: 269 SFMSYQSGVLTSCAGM---PLNHGVLLVWYNRTG-------EVPYWVIKNSWGENWGENG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVTMGVNAC 329


>gi|156399477|ref|XP_001638528.1| predicted protein [Nematostella vectensis]
 gi|156225649|gb|EDO46465.1| predicted protein [Nematostella vectensis]
          Length = 325

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 175/319 (54%), Gaps = 23/319 (7%)

Query: 54  LGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTP 113
           L  +  +  +K    K Y  +EE D R  I+  NL    +H   + S    +  F+DLT 
Sbjct: 21  LSQDRQWHAWKDFHGKTYTGEEE-DLRRAIWNDNLEIVKKHNAENHSYKLDMNHFADLTV 79

Query: 114 AEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
            EF++ ++G R        +   P L    LPA+ DWR+KG V  VK+QG CGSCW+FS+
Sbjct: 80  TEFKQRFMGYRAASNSTGGSTFLP-LSNVQLPAEVDWRDKGFVTAVKNQGQCGSCWAFSS 138

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TG+LEG +F  TGKLVSLSEQ LVDC  +         ++GC GGLM+ AF+Y     G+
Sbjct: 139 TGSLEGQHFRKTGKLVSLSEQNLVDCSKKYG-------NNGCEGGLMDYAFKYIKNNDGI 191

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY 292
             E+ YPYT  D    C F    + A+V  ++ V    E  + + +   GP++VAI+A +
Sbjct: 192 DTEQSYPYTARDG--QCHFKPGSVGATVTGYTDVQRGSEGDLQSAVATVGPISVAIDAGH 249

Query: 293 --MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y  GV S P   S +LDHGVL VGYG+          K YW++KNSWGE WG NG
Sbjct: 250 SSFQLYKTGVYSEPDCSSTQLDHGVLAVGYGAE-------DGKDYWLVKNSWGEGWGMNG 302

Query: 350 YYKICRGR-NVCGVDSMVS 367
           Y K+ R + N CG+ +  S
Sbjct: 303 YIKMSRNKDNQCGIATQAS 321


>gi|449438381|ref|XP_004136967.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 479

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/309 (42%), Positives = 176/309 (56%), Gaps = 28/309 (9%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR--RK 126
           KAY +  E + RF IFK NLR    H +   +   G+T+F+DLT  E+R  +LG R  RK
Sbjct: 71  KAYNAIGEKERRFEIFKDNLRFIDEHNRESRTYKVGLTRFADLTNEEYRARFLGGRFSRK 130

Query: 127 LRL--PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLA 184
            RL   K    A  L  +DLP D DWR+KGAV  VKDQG CGSCW+FS+  A+EG N + 
Sbjct: 131 PRLSAAKSGRYAAAL-GDDLPDDVDWRKKGAVATVKDQGQCGSCWAFSSVAAVEGINQIV 189

Query: 185 TGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGT 244
           TG+L+ LSEQ+LVDCD         S + GCNGGLM+ AF++ +  GG+  EEDYPY G 
Sbjct: 190 TGELIPLSEQELVDCDK--------SFNMGCNGGLMDYAFQFIIGNGGIDTEEDYPYKGR 241

Query: 245 DRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVS 301
           D   AC  + K+    ++  +  V  +++      V N P++VAI A     Q Y  GV 
Sbjct: 242 DA--ACDPNRKNAKVVTIDGYEDVPENDESSLKKAVANQPVSVAIEAGGRAFQLYQSGVF 299

Query: 302 CPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCG 361
               C   LDHGV+ VGYG+            YWI++NSWG+ WGE+GY ++   RNV  
Sbjct: 300 TGR-CGTDLDHGVVAVGYGTD-------NGTDYWIVRNSWGKDWGESGYIRL--ERNVAN 349

Query: 362 VDSMVSTVA 370
           + +    +A
Sbjct: 350 ITTGKCGIA 358


>gi|21666724|gb|AAM73806.1|AF448505_1 cysteine proteinase [Brassica napus]
 gi|21666726|gb|AAM73807.1|AF448506_1 cysteine proteinase [Brassica napus]
          Length = 343

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/294 (40%), Positives = 158/294 (53%), Gaps = 27/294 (9%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLRRK 126
           + YA   E ++R+ +FK N+    R  ++    T    + QF+DLT  EFR  Y G +  
Sbjct: 46  RVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVNQFADLTNEEFRSMYTGYKGN 105

Query: 127 LRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
             L             + ++ LP   DWR+KGAV P+KDQGSCGSCW+FS   A+EG   
Sbjct: 106 SVLSSRTKPTSFRYQHVSSDALPISVDWRKKGAVTPIKDQGSCGSCWAFSAVAAIEGVAQ 165

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
           +  GKL+SLSEQ+LVDCD         + D GC GG MNSAF YT+  GGL  E +YPY 
Sbjct: 166 IKKGKLISLSEQELVDCD---------TNDDGCMGGYMNSAFNYTMTTGGLTSESNYPYK 216

Query: 243 GTDRGHACKFDKSK-IAASVANFSVVSLDEDQIAANLVKNGPLAVAI--NAVYMQTYIGG 299
            TD    C  +K+K IA S+  F  V  ++++     V + P+++ I       Q Y  G
Sbjct: 217 STD--GTCNINKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGGTGFQFYSSG 274

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           V     CS  LDHGV +VGYG +           YWI+KNSWG  WGE GY +I
Sbjct: 275 VFSGE-CSTHLDHGVAVVGYGKSSNGS------KYWILKNSWGPKWGERGYMRI 321


>gi|126681066|gb|ABO26562.1| cathepsin L-like cysteine protease [Ixodes ricinus]
          Length = 335

 Score =  211 bits (538), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/329 (38%), Positives = 177/329 (53%), Gaps = 31/329 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQ 107
           ++LGAE  +S FK K  K+Y S+ E   R  I+  N  + A+H +     +   +  + +
Sbjct: 21  EVLGAE--WSAFKAKHGKSYVSETEEVFRLKIYMENRHKIAKHNEKYARGEVPYSMAMNE 78

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN----DLPADFDWREKGAVGPVKDQG 163
           F D+   EF  T  G +R  +         + P N     LP   DWR KGAV PVK+QG
Sbjct: 79  FGDMLHHEFVSTRNGFKRNYKDQPREGSTYLEPENIEDFSLPKTVDWRTKGAVTPVKNQG 138

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCW+FS TG+LEG +F  +G +VSLSEQ LV C  +         ++GC GGLM+ A
Sbjct: 139 QCGSCWAFSATGSLEGQHFRKSGSMVSLSEQNLVGCSTDFG-------NNGCEGGLMDDA 191

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNG 282
           F+Y     G+  E+ YPY GTD    C F KS + A+ + F  +    E Q+   +   G
Sbjct: 192 FKYIRANKGIDTEKSYPYNGTDG--TCHFKKSTVGATDSGFVDIKEGSETQLKKAVATVG 249

Query: 283 PLAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
           P++VAI+A +   Q Y  GV   P   S  LDHGVL+VGYG+       L    YW +KN
Sbjct: 250 PISVAIDASHESFQFYSDGVYDEPECDSESLDHGVLVVGYGT-------LNGTDYWFVKN 302

Query: 340 SWGESWGENGYYKICRG-RNVCGVDSMVS 367
           SWG +WG+ GY ++ R  +N CG+ S  S
Sbjct: 303 SWGTTWGDEGYIRMSRNKKNQCGIASSAS 331


>gi|115461667|ref|NP_001054433.1| Os05g0108600 [Oryza sativa Japonica Group]
 gi|14719319|gb|AAK73137.1|AC079022_10 putative cysteine proteinase [Oryza sativa]
 gi|33151125|gb|AAP97431.1| cysteine protease CP1 [Oryza sativa]
 gi|52353572|gb|AAU44138.1| cysteine proteinase CP1 [Oryza sativa Japonica Group]
 gi|113577984|dbj|BAF16347.1| Os05g0108600 [Oryza sativa Japonica Group]
 gi|125550541|gb|EAY96250.1| hypothetical protein OsI_18148 [Oryza sativa Indica Group]
          Length = 358

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/335 (38%), Positives = 179/335 (53%), Gaps = 35/335 (10%)

Query: 49  TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI 105
           +  DL   +    LF+K   K+ KAYAS EE   RF +FK NL       K   S   G+
Sbjct: 37  SEEDLASHDRLIELFEKWVAKYRKAYASFEEKVRRFEVFKDNLNHIDDINKKVTSYWLGL 96

Query: 106 TQFSDLTPAEFRRTYLGL------RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPV 159
            +F+DLT  EF+ TYLGL              +  +   +   ++P + DWR+K AV  V
Sbjct: 97  NEFADLTHDEFKATYLGLTPPPTRSNSKHYSSEEFRYGKMSNGEVPKEMDWRKKNAVTEV 156

Query: 160 KDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           K+QG CGSCW+FST  A+EG N + TG L SLSEQ+L+DC  +         ++GCNGGL
Sbjct: 157 KNQGQCGSCWAFSTVAAVEGINAIVTGNLTSLSEQELIDCSTD--------GNNGCNGGL 208

Query: 220 MNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLV 279
           M+ AF Y    GGL  EE YPY   + G  C   K     +++ +  V  +++Q     +
Sbjct: 209 MDYAFSYIASTGGLRTEEAYPYA-MEEGD-CDEGKGAAVVTISGYEDVPANDEQALVKAL 266

Query: 280 KNGPLAVAINAV--YMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
            + P++VAI A   + Q Y GGV   P  C  +LDHGV  VGYG++       K + Y I
Sbjct: 267 AHQPVSVAIEASGRHFQFYSGGVFDGP--CGEQLDHGVTAVGYGTS-------KGQDYII 317

Query: 337 IKNSWGESWGENGYYKICR----GRNVCGVDSMVS 367
           +KNSWG  WGE GY ++ R    G  +CG++ M S
Sbjct: 318 VKNSWGPHWGEKGYIRMKRGTGKGEGLCGINKMAS 352


>gi|302764466|ref|XP_002965654.1| hypothetical protein SELMODRAFT_230713 [Selaginella moellendorffii]
 gi|300166468|gb|EFJ33074.1| hypothetical protein SELMODRAFT_230713 [Selaginella moellendorffii]
          Length = 345

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 177/312 (56%), Gaps = 28/312 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHGITQFSDLTPAEFRR 118
           +  + ++  KAY S  E+  RF IFK N+     H  + + S + G+ +F+DLT +EFR 
Sbjct: 38  YQKWIQEHGKAYNSAHEYKKRFQIFKENVNYINSHNARRNNSHSLGLNKFADLTNSEFRG 97

Query: 119 TYLG-LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            Y+G L+R     +  D A +    D     DWR+KG V  +KDQG CGSCW+FS   A+
Sbjct: 98  LYVGRLQRPAPFHEVGDIALVA---DTATSVDWRKKGGVTEIKDQGDCGSCWAFSAVAAV 154

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL+TG LVSLSEQ+LVDCD         + + GC+GG+M+ AF+Y ++ GG+  + 
Sbjct: 155 EGLTFLSTGTLVSLSEQELVDCDT--------TVNQGCDGGIMDYAFQYMIRNGGITSQS 206

Query: 238 DYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQ 294
           +YPY    RG AC  DK K  AA++  F  +    +++    V N P++VAI A     Q
Sbjct: 207 NYPYRAL-RG-ACDKDKVKYHAATINGFQAIPPQSEELLLRAVANQPVSVAIEAGGQDFQ 264

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y  GV     C   LDHGV +VGYG+          + YW++KNSWG  WGE+GY ++ 
Sbjct: 265 LYSSGVFTGE-CGSNLDHGVAIVGYGTDAGG------RQYWLVKNSWGSGWGESGYVRME 317

Query: 355 R---GRNVCGVD 363
           R   G  VCG++
Sbjct: 318 RQGPGAGVCGIN 329


>gi|292397748|ref|YP_003517814.1| cathepsin [Lymantria xylina MNPV]
 gi|291065465|gb|ADD73783.1| cathepsin [Lymantria xylina MNPV]
          Length = 335

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/332 (37%), Positives = 184/332 (55%), Gaps = 34/332 (10%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRR--AARHQKLD-PSATHGITQF 108
           +L  A  +F  F + +NK Y S  E + R++IFK NL    A      D P+AT+GI +F
Sbjct: 27  NLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYGINKF 86

Query: 109 SDLTPAEFRRTYLGLRRKLRLPKDAD---QAPIL--PTNDLPADFDWREKGAVGPVKDQG 163
           SDL+ +E    + GL     +P+ A    +  +L  P +  P  FDWRE+  V  +K+QG
Sbjct: 87  SDLSKSELIAKFTGLS----IPQRASNFCKTIVLNQPPDKGPLHFDWREQNKVTSIKNQG 142

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
           +CG+CW+F+T  ++E    +   +LV LSEQQL+DCD         S D GCNGGL+++A
Sbjct: 143 ACGACWAFATLASVESQFAMRHNRLVDLSEQQLIDCD---------SVDMGCNGGLLHTA 193

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGP 283
           FE  ++ GG+  E DYP+ G DR       +  + + V  +  V ++E+++   L   GP
Sbjct: 194 FEEIIRMGGVQAELDYPFVGRDRRCGVDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGP 253

Query: 284 LAVAINAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           + +AI+A  +  Y  GV  SC    +  L+H VLLVGYG            PYW  KN+W
Sbjct: 254 IPMAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYGVENGV-------PYWAFKNTW 303

Query: 342 GESWGENGYYKICRGRNVCG-VDSMVSTVAAA 372
           G+ WGENGY+++ +  N CG V+ + ST   A
Sbjct: 304 GDDWGENGYFRVRQNINACGMVNDLASTAVLA 335


>gi|171702829|dbj|BAG16370.1| cysteine protease [Brassica oleracea var. italica]
          Length = 332

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/294 (40%), Positives = 158/294 (53%), Gaps = 27/294 (9%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLRRK 126
           + YA   E ++R+ +FK N+    R  ++    T    + QF+DLT  EFR  Y G +  
Sbjct: 40  RVYADANEKNNRYVVFKRNVESIERLNEVQYGLTFKLAVNQFADLTNEEFRSMYTGYKGN 99

Query: 127 LRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
             L             + ++ LP   DWR+KGAV P+KDQGSCGSCW+FS   A+EG   
Sbjct: 100 SVLSSRTKPTSFRYQHVSSDALPISVDWRKKGAVTPIKDQGSCGSCWAFSAVAAIEGVAQ 159

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
           +  GKL+SLSEQ+LVDCD         + D GC GG MNSAF YT+  GGL  E +YPY 
Sbjct: 160 IKKGKLISLSEQELVDCD---------TNDDGCMGGYMNSAFNYTMTTGGLTSESNYPYK 210

Query: 243 GTDRGHACKFDKSK-IAASVANFSVVSLDEDQIAANLVKNGPLAVAI--NAVYMQTYIGG 299
            TD    C  +K+K IA S+  F  V  ++++     V + P+++ I       Q Y  G
Sbjct: 211 STD--GTCNINKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGGTGFQFYSSG 268

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           V     CS  LDHGV +VGYG +           YWI+KNSWG  WGE GY +I
Sbjct: 269 VFSGE-CSTHLDHGVAVVGYGKSSNGS------KYWILKNSWGPKWGERGYMRI 315


>gi|307110445|gb|EFN58681.1| hypothetical protein CHLNCDRAFT_56822 [Chlorella variabilis]
          Length = 466

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/315 (40%), Positives = 176/315 (55%), Gaps = 21/315 (6%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  + +   +AYAS EE++ RF ++  NLR    +     S    +  ++DL+  E+R  
Sbjct: 40  FDFWVQTLKRAYASAEEYERRFDVWLDNLRFVHEYNAGHTSHWLSMGVYADLSQDEYRSK 99

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPA-DFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            LG    L   +    AP L    +P  + DW  KGAV PVK+Q  CGSCW+FSTTGA+E
Sbjct: 100 ALGYNADLHEERPLRAAPFLYEGTVPPKEVDWVAKGAVTPVKNQLLCGSCWAFSTTGAVE 159

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           GA+ +ATGKL SLSEQ LVDCD E         D+GC+GGLM+ AFE+ +K GG+  E+D
Sbjct: 160 GASAIATGKLASLSEQMLVDCDRE--------RDNGCHGGLMDFAFEFIMKNGGIDTEDD 211

Query: 239 YPYTGTDRGHACKFDK-SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQT 295
           YPYT  +    C+ +K  +   ++ ++  V  +++      V N P++VAI A     Q 
Sbjct: 212 YPYTAEE--GMCQDNKMRRHVVTIDDYQDVPPNDEHALMKAVANQPVSVAIEADQRAFQL 269

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           Y GGV     C   LDHGVL+VGYG+A      L   PYW++KNSWG  WG+ GY ++ R
Sbjct: 270 YGGGVF-DAECGTALDHGVLVVGYGTASNGTHHL---PYWLVKNSWGAEWGDKGYIRLLR 325

Query: 356 G---RNVCGVDSMVS 367
                  CGV    S
Sbjct: 326 NLGEEGQCGVAMQAS 340


>gi|224069140|ref|XP_002326284.1| predicted protein [Populus trichocarpa]
 gi|118482340|gb|ABK93094.1| unknown [Populus trichocarpa]
 gi|222833477|gb|EEE71954.1| predicted protein [Populus trichocarpa]
          Length = 358

 Score =  211 bits (537), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/365 (38%), Positives = 188/365 (51%), Gaps = 35/365 (9%)

Query: 13  LVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNK 69
           L +   V++G+  D+ +  I+ V+D     L   ES+   +LG       F+ F  +  K
Sbjct: 13  LFLLCCVAAGSSFDESNP-IKLVSDR----LHDFESSFVKVLGQSRRALSFARFAHRHGK 67

Query: 70  AYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRL 129
            Y ++ E   RF IF  +L       K     T G+ QF+D T  EF++  LG  +    
Sbjct: 68  RYETEGEMKLRFAIFSESLDLIRSTNKKGLPYTLGLNQFADWTWQEFQKYRLGAAQNCSA 127

Query: 130 PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLV 189
               +    L    LP   DWRE+G V PVK+QG CGSCW+FSTTGALE A   A GK +
Sbjct: 128 TTRGNHK--LTNALLPETKDWREEGIVSPVKNQGHCGSCWTFSTTGALEAAYHQAFGKGI 185

Query: 190 SLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHA 249
           SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPYTG D   A
Sbjct: 186 SLSEQQLVDCARAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKD--DA 236

Query: 250 CKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAV-YMQTYIGGVSCPYI 305
           CKF    +   V    N ++ + DE + A   V+  P++VA   V   + Y  GV     
Sbjct: 237 CKFSSENVGVRVVESVNITLGAEDELKHAVAFVR--PVSVAFEVVGSFRLYKEGVYTTST 294

Query: 306 CSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGV 362
           C      ++H VL VGYG            PYW+IKNSWGE WG+NGY+K+  G+N+CG+
Sbjct: 295 CGSTPMDVNHAVLAVGYGVE-------NGIPYWLIKNSWGEDWGDNGYFKMEMGKNMCGI 347

Query: 363 DSMVS 367
            +  S
Sbjct: 348 ATCAS 352


>gi|86355549|ref|YP_473217.1| Cathepsin [Hyphantria cunea nucleopolyhedrovirus]
 gi|86198154|dbj|BAE72318.1| Cathepsin [Hyphantria cunea nucleopolyhedrovirus]
          Length = 324

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 116/312 (37%), Positives = 172/312 (55%), Gaps = 19/312 (6%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           DLL A  +F  F  KFNK Y+S+ E   RF IF+ NL       + D +A + I +FSDL
Sbjct: 20  DLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDL 79

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           +  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+
Sbjct: 80  SKDETISKYTGLALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWA 139

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           F+T  +LE    +   +L++LSEQQL+DCD+          D+GCNGGL+++A+E  ++ 
Sbjct: 140 FATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAVMQM 190

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           GG+  E DYPY G+D G+        +      +  +++ E+++   L   GP+ VAI+A
Sbjct: 191 GGVQAENDYPYEGSD-GNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDA 249

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             +  Y  G+   Y  +  L+H VLLVGYG            PYWI+KN+WGE WGE GY
Sbjct: 250 SDIVNYRRGIM-RYCSNYGLNHAVLLVGYGVEN-------NVPYWILKNTWGEDWGEQGY 301

Query: 351 YKICRGRNVCGV 362
           +++ +  N CG+
Sbjct: 302 FRVQQNINACGI 313


>gi|296213765|ref|XP_002753411.1| PREDICTED: pro-cathepsin H [Callithrix jacchus]
          Length = 336

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 171/318 (53%), Gaps = 30/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  +  K +K Y+ +EE+  R   F +N R+   H   + +    + QFSD++ AE +R
Sbjct: 34  HFKSWMAKHHKTYSREEEYHQRLQTFASNWRKINAHNNGNHTFKMAVNQFSDMSFAEIKR 93

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTT 174
            YL        P++        +  T   P   DWR+KG  V PVK+QG+CGSCW+FSTT
Sbjct: 94  KYL-----WSEPQNCSATKSNYLRGTGPYPPSVDWRKKGHFVSPVKNQGACGSCWTFSTT 148

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +ATGK++SL+EQQLVDC  + +       + GC GGL + AFEY L   G+M
Sbjct: 149 GALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNNGIM 201

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G D    CKF   K    V + + +++ DED +   +    P++ A      
Sbjct: 202 GEDTYPYQGKDSD--CKFQPGKAIGFVKDVANITIYDEDAMVEAVALYNPVSFAFEVTQD 259

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  G+     C +   +++H VL VGYG            PYWI+KNSWG  WG NG
Sbjct: 260 FMMYKRGIYSSTSCHKTPDKVNHAVLAVGYGEE-------NGIPYWIVKNSWGPQWGMNG 312

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG+N+CG+ +  S
Sbjct: 313 YFLIERGKNMCGLAACAS 330


>gi|223646726|gb|ACN10121.1| Cathepsin L1 precursor [Salmo salar]
 gi|223672581|gb|ACN12472.1| Cathepsin L1 precursor [Salmo salar]
          Length = 338

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 174/322 (54%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           E H+ L+K   +K+Y   EE   R  +++ NL++   H        H    G+  F D+T
Sbjct: 27  EDHWHLWKNWHSKSYHESEE-GWRRMVWEKNLKKIEMHNLEHTMGKHSYRLGMNHFGDMT 85

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+T  G ++     +    +  +  N L  P   DWREKG V PVKDQGSCGSCW+
Sbjct: 86  NEEFRQTMNGYKQTTE--RKFKGSLFMEPNYLQAPKAVDWREKGYVTPVKDQGSCGSCWA 143

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTGA+EG  F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    
Sbjct: 144 FSTTGAMEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIQDN 196

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
            GL  EE YPY GTD    C +      A+   F  + S  E  +   +   GP++VAI+
Sbjct: 197 AGLDTEESYPYVGTDED-PCHYKPEFSGANETGFVDIPSGKEHAMMKAVAAVGPVSVAID 255

Query: 290 AVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+     C S  LDHGVL+VGYG  G     +  K YWI+KNSW E WG
Sbjct: 256 AGHESFQFYEFGIYYEKECSSEELDHGVLVVGYGFEG---EDVDGKKYWIVKNSWSEKWG 312

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + GY  + + R N CG+ +  S
Sbjct: 313 DKGYIYMAKDRKNHCGIATASS 334


>gi|1706261|sp|Q10717.1|CYSP2_MAIZE RecName: Full=Cysteine proteinase 2; Flags: Precursor
 gi|644490|dbj|BAA08245.1| cysteine proteinase [Zea mays]
          Length = 360

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 144/373 (38%), Positives = 189/373 (50%), Gaps = 36/373 (9%)

Query: 8   LFLVSLVVFS---AVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEH---HFS 61
           LF++++VV +   AV +    D     IR VTD     L   EST    LG       F+
Sbjct: 6   LFVLAVVVLADTAAVVNSGFADS--NPIRPVTDRAASAL---ESTVFAALGRTRDALRFA 60

Query: 62  LFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYL 121
            F  ++ K+Y S  E   RF IF  +L+      +   S   GI +F+D++  EFR T L
Sbjct: 61  RFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRL 120

Query: 122 GLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
           G  +        +         LP   DWRE G V PVK+QG CGSCW+FSTTGALE A 
Sbjct: 121 GAAQNCSATLTGNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAY 180

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
             ATGK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE YPY
Sbjct: 181 TQATGKPISLSEQQLVDCGFAFN-------NFGCNGGLPSQAFEYIKYNGGLDTEESYPY 233

Query: 242 TGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYI 297
            G +    CKF    +   V    N ++ + DE + A  LV+  P++VA   +   + Y 
Sbjct: 234 QGVN--GICKFKNENVGVKVLDSVNITLGAEDELKDAVGLVR--PVSVAFEVITGFRLYK 289

Query: 298 GGVSCPYICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            GV     C      ++H VL VGYG            PYW+IKNSWG  WG+ GY+K+ 
Sbjct: 290 SGVYTSDHCGTTPMDVNHAVLAVGYGVE-------DGVPYWLIKNSWGADWGDEGYFKME 342

Query: 355 RGRNVCGVDSMVS 367
            G+N+CGV +  S
Sbjct: 343 MGKNMCGVATCAS 355


>gi|255032|gb|AAB23155.1| COT44=cysteine proteinase homolog [Brassica napus, seedling, rapid
           cycling base population CrGC5, Peptide, 328 aa]
          Length = 328

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 120/290 (41%), Positives = 166/290 (57%), Gaps = 27/290 (9%)

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLR----RKLRL 129
           + D RF IFK NLR    H + + +AT+  G+T F++LT  E+R  YLG R    R++  
Sbjct: 24  QQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITK 83

Query: 130 PKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
            K+ +       ND+  P   DWR+KGAV  +KDQG+CGSCW+FST  A+EG N + TG+
Sbjct: 84  AKNVNMKYSAAVNDVEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGE 143

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           LVSLSEQ+LVDCD         S + GCNGGLM+ AF++ +K GGL  E+DYPY GT+ G
Sbjct: 144 LVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTN-G 194

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYI 305
                 K+    ++  +  V   ++      V   P++VAI+A     Q Y  G+     
Sbjct: 195 KCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGK- 253

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           C   +DH V+ VGYGS            YWI++NSWG  WGE+GY ++ R
Sbjct: 254 CGTNMDHAVVAVGYGSENGV-------DYWIVRNSWGTRWGEDGYIRMER 296


>gi|225444726|ref|XP_002278624.1| PREDICTED: thiol protease aleurain-like isoform 1 [Vitis vinifera]
 gi|147826441|emb|CAN62278.1| hypothetical protein VITISV_031382 [Vitis vinifera]
 gi|297738562|emb|CBI27807.3| unnamed protein product [Vitis vinifera]
          Length = 362

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 145/367 (39%), Positives = 191/367 (52%), Gaps = 42/367 (11%)

Query: 13  LVVFSAVSSGTLID------DVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLF 63
           L++  AV+SG          D +  IR V+D   ++    ES+   L+G   H   F+ F
Sbjct: 11  LILLCAVASGEADHHFRSSFDEENPIRLVSDSIRDL----ESSVLRLIGDTRHAHSFASF 66

Query: 64  KKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL 123
             ++ K+Y + +E   RF IF  NL+      +     T  + QF+D T  EFRR  LG 
Sbjct: 67  AHRYGKSYKTVDEIKLRFEIFSENLKLIRSTNRKGLPYTLAVNQFADWTWEEFRRHRLGA 126

Query: 124 RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
            +        +    L    LP   DWRE G V P+KDQG CGSCW+FSTTGALE A   
Sbjct: 127 AQNCSATLKGNHK--LTDVILPETKDWREDGIVSPIKDQGHCGSCWTFSTTGALEAAYAQ 184

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
           A GK +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG
Sbjct: 185 AFGKGISLSEQQLVDCAGAFN-------NFGCHGGLPSQAFEYIKYNGGLDTEEAYPYTG 237

Query: 244 TDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGG 299
            D    CKF    I   V    N ++ + DE + A   V+  P++VA   V+  + Y  G
Sbjct: 238 LDG--TCKFSSENIGVQVLDSVNITLGAEDELKHAVAFVR--PVSVAFEVVHDFRFYKKG 293

Query: 300 VSCPYICSRR---LDHGVLLVGYG-SAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           V     C      ++H VL VGYG   G A        YW+IKNSWGE+WG+NGY+K+  
Sbjct: 294 VYTSGTCGSTPMDVNHAVLAVGYGVEDGVA--------YWLIKNSWGENWGDNGYFKMEL 345

Query: 356 GRNVCGV 362
           G+N+CGV
Sbjct: 346 GKNMCGV 352


>gi|332326591|gb|AEE42619.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 165/311 (53%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYWRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKBQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKBQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A   LV LSEQQLV CD +         DSGC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAXHGLVRLSEQQLVSCDDK---------DSGCGGGLMTQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGT--DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPY  +  D        +    A +  + ++   E  +AA L K+GP+++A++A 
Sbjct: 209 FTEDSYPYVSSTGDVPECTNSSELVPGARIDGYVMIESXETVMAAWLAKSGPISIAVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC     + L+HGVLLVGY   G       E PYW+IKNSWGE WGE G
Sbjct: 269 PFMSYESGVLTSC---VGKXLNHGVLLVGYNMTG-------EVPYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVTMGVNAC 329


>gi|32396020|gb|AAP41847.1| senescence-associated cysteine protease [Anthurium andraeanum]
          Length = 460

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/297 (42%), Positives = 170/297 (57%), Gaps = 27/297 (9%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDP--SATHGITQFSDLTPAEFRRTYLGLRRK 126
           KAY    E + RF IF  NLR    H + +   S T G+T+F+DLT  E+R TYLG++  
Sbjct: 47  KAYNLLGEKERRFEIFWDNLRYIDDHNRAENNHSYTLGLTRFADLTNEEYRSTYLGVKPG 106

Query: 127 LRLPKDADQAP----ILPTN--DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
              P+ A++AP     L  N  DLP   DWREKGAV P+KDQG CGSCW+FST  A+EG 
Sbjct: 107 QVRPRRANRAPGRGRDLSANGDDLPQKVDWREKGAVAPIKDQGGCGSCWAFSTVAAVEGI 166

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           N + TG L+ LSEQ+LVDCD         + + GCNGGLM+ AF++ +  GG+  EEDYP
Sbjct: 167 NQIVTGDLIVLSEQELVDCDT--------AYNEGCNGGLMDYAFQFIISNGGIDTEEDYP 218

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN--AVYMQTYIG 298
           Y   D G      K+    S+ ++  V  +++      V + P++VAI       Q Y  
Sbjct: 219 YKERD-GLCDPNRKNAKVVSIDSYEDVLENDEHALKTAVAHQPVSVAIEGGGRSFQLYKS 277

Query: 299 GVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           G+     C   LDHGV+ VGYG+          K YWI++NSWG+SWGE GY ++ R
Sbjct: 278 GIF-DGRCGIDLDHGVVAVGYGTE-------SGKDYWIVRNSWGKSWGEAGYIRMER 326


>gi|1208549|gb|AAC49455.1| Pseudotzain [Pseudotsuga menziesii]
          Length = 454

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/374 (36%), Positives = 193/374 (51%), Gaps = 45/374 (12%)

Query: 7   VLFLVSLVVFSAVSSGTLIDDVDQLIRQVTD--GGDEILSHHESTNNDLLGAEHHFSLFK 64
           +L L +++  SA++      D   +     D  G D I+  +E              L+ 
Sbjct: 3   ILLLFAVLALSAMAGSASRADFSIISYDSQDLIGDDAIMELYE--------------LWL 48

Query: 65  KKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRRTYLGL 123
            +  KAY   +E   +F++FK N     +H    +PS   G+ QF+DL+  EF+  YLG 
Sbjct: 49  AQHKKAYNGLDEKQKKFSVFKDNFLYIHQHNNQGNPSYKLGLNQFADLSHEEFKAAYLGT 108

Query: 124 R-----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           +     R  R P    Q  +    DLP   DWREKGAV  VK+QGSCGSCW+FST  A+E
Sbjct: 109 KLDAKKRLSRSPSPRYQYSV--GEDLPESIDWREKGAVTAVKNQGSCGSCWAFSTVAAVE 166

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G N + TG L SLSEQ+LVDCD         S + GCNGGLM+ AF++ +  GGL  E+D
Sbjct: 167 GINQIVTGNLTSLSEQELVDCDT--------SYNQGCNGGLMDYAFQFIISNGGLDSEDD 218

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTY 296
           YPY   + G    + K+    ++ ++  V  ++++       N P++VAI A     Q Y
Sbjct: 219 YPYK-ANNGSCDAYRKNAHVVTIDDYEDVPENDEKSLKKAAANQPISVAIEASGRAFQFY 277

Query: 297 IGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
             GV     C  +LDHGV LVGYGS            YW++KNSWG SWGE G+ K+   
Sbjct: 278 ESGVFTSN-CGTQLDHGVTLVGYGSE-------SGIDYWLVKNSWGNSWGEKGFIKL--Q 327

Query: 357 RNVCGVDSMVSTVA 370
           RN+ G  + +  +A
Sbjct: 328 RNLEGASTGMCGIA 341


>gi|374713649|gb|AEZ65082.1| cysteine protease [Carica papaya]
          Length = 471

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/332 (39%), Positives = 184/332 (55%), Gaps = 34/332 (10%)

Query: 43  LSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSAT 102
           L   E T   ++    H+ +   K  K Y +  E + RF IFK NLR       + P  T
Sbjct: 38  LQSTERTEAHMMKMYEHWLV---KHGKNYNAIGEKERRFEIFKDNLRFVDEQNSV-PGRT 93

Query: 103 H--GITQFSDLTPAEFRRTYLG--LRRKLRLPKDADQAPILPT---NDLPADFDWREKGA 155
           +  G+T+F+DLT  E+R  YLG  + +K +L  +  Q  +      +DLP+  DWREKGA
Sbjct: 94  YKLGLTKFADLTNEEYRAMYLGAKMEKKEKLRTERSQRYLHKAGNDDDLPSHVDWREKGA 153

Query: 156 VGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGC 215
           V  VKDQG CGSCW+FST G++EG N + TG L+SLSEQ+LVDCD         + + GC
Sbjct: 154 VTEVKDQGQCGSCWAFSTVGSVEGINQIVTGDLISLSEQELVDCDK--------AYNQGC 205

Query: 216 NGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD-KSKIAASVANFSVVSLDEDQI 274
           NGGLM+ AFE+ +K GG+  E DYPY  +D  + C  + K+    ++  +  V  ++++ 
Sbjct: 206 NGGLMDYAFEFIIKNGGIDSEADYPYRASD--NMCDSNRKNAHVVTIDGYEDVPENDEES 263

Query: 275 AANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEK 332
               V N P++VAI A     Q Y  GV     C   LDHGV+ VGYG+           
Sbjct: 264 LKKAVANQPVSVAIEAGGREFQLYQSGVFTGR-CGTNLDHGVVAVGYGTENGI------- 315

Query: 333 PYWIIKNSWGESWGENGYYKICRGRNVCGVDS 364
            YWI++NSWG  WGE+GY ++   RNV   D+
Sbjct: 316 DYWIVRNSWGPKWGESGYIRM--ERNVASTDT 345


>gi|340368362|ref|XP_003382721.1| PREDICTED: cathepsin L1-like [Amphimedon queenslandica]
          Length = 329

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/317 (39%), Positives = 176/317 (55%), Gaps = 28/317 (8%)

Query: 55  GAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT----QFSD 110
           G  + + L+K  + K+Y + EE  +R   ++ N      H     S  HG T     F D
Sbjct: 22  GTSNEWELWKATYGKSYLTLEEEKYRRDTWEENSLLIKTHNT--DSDKHGYTLEMNSFGD 79

Query: 111 LTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           LT AEF   Y G R+ L        + +   N +P+  DWR+K  V  VK+QG CGSCW+
Sbjct: 80  LTSAEFSSLYNGYRQNLETSGSVFSSSL--RNAMPSSLDWRDKKVVTDVKNQGKCGSCWA 137

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTG+LEG + L TG LVSLSEQQL+DC  +         ++GC+GG M SAF+Y   A
Sbjct: 138 FSTTGSLEGLHALKTGHLVSLSEQQLMDCSVKYG-------NNGCDGGNMRSAFQYIKDA 190

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
           GG   EE YPYT   +  +C+FD  K+ A+   +  + S DE  +   L + GP++VA++
Sbjct: 191 GGDDTEESYPYTA--KNESCRFDPKKVGATDEGYVRIPSGDEVSLMHALYEVGPISVAMD 248

Query: 290 A--VYMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A     Q Y  G+   Y+CS   L+HGV L+GYG +          PYW++KNSWG+ WG
Sbjct: 249 AGLKTFQFYKKGIYSDYLCSNTHLNHGVTLIGYGESS------DGSPYWLVKNSWGKDWG 302

Query: 347 ENGYYKICRG-RNVCGV 362
            +GY+ + R   N+CGV
Sbjct: 303 IDGYFMLARYVGNMCGV 319


>gi|195056367|ref|XP_001995082.1| GH22826 [Drosophila grimshawi]
 gi|193899288|gb|EDV98154.1| GH22826 [Drosophila grimshawi]
          Length = 340

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 176/324 (54%), Gaps = 31/324 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLTPAE 115
           +  FK +  K Y  + E   R  IF  N  + A+H +L    + S   G+ +++D+   E
Sbjct: 28  WQTFKLEHRKQYQDETEERFRLKIFNENKHKIAKHNQLYAAGEVSFKMGLNKYADMLHHE 87

Query: 116 FRRTYLGLRRKLRLPKDADQAP------ILPTN-DLPADFDWREKGAVGPVKDQGSCGSC 168
           F  T  G    L     A  A       I P +  LP   DWR KGAV  VKDQG CGSC
Sbjct: 88  FHETMNGFNYTLHKQLRASDATFTGVTFISPEHVKLPQSVDWRNKGAVTGVKDQGHCGSC 147

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           W+FS+TGALEG +F  TG L+SLSEQ LVDC  +         ++GCNGGLM++AF Y  
Sbjct: 148 WAFSSTGALEGQHFRKTGTLISLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIK 200

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVA 287
             GG+  E+ YPY G D   +C F+K  I A+   F+ +   DE ++A  +   GP++VA
Sbjct: 201 DNGGIDTEKSYPYEGIDD--SCHFNKGTIGATDRGFTDIPQGDEKKLAQAVATIGPVSVA 258

Query: 288 INAVY--MQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           I+A +   Q Y  GV     C  + LDHGVL+VGYG+          K YW++KNSWG +
Sbjct: 259 IDASHESFQFYSTGVYDEPQCDPQNLDHGVLVVGYGTDENG------KDYWLVKNSWGTT 312

Query: 345 WGENGYYKICRG-RNVCGVDSMVS 367
           WG+ G+ K+ R   N CG+ +  S
Sbjct: 313 WGDKGFIKMARNDDNQCGIATASS 336


>gi|237844793|ref|XP_002371694.1| cathepsin L-like thiolproteinase, putative [Toxoplasma gondii ME49]
 gi|50313163|gb|AAT74529.1| toxopain-2 [Toxoplasma gondii]
 gi|89242977|gb|ABD64744.1| cathepsin L [Toxoplasma gondii]
 gi|95007485|emb|CAJ20707.1| toxopain-2 [Toxoplasma gondii RH]
 gi|211969358|gb|EEB04554.1| cathepsin L-like thiolproteinase, putative [Toxoplasma gondii ME49]
 gi|221480879|gb|EEE19300.1| cysteine protease, putative [Toxoplasma gondii GT1]
 gi|221501596|gb|EEE27366.1| cysteine protease, putative [Toxoplasma gondii VEG]
          Length = 422

 Score =  211 bits (536), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/301 (42%), Positives = 169/301 (56%), Gaps = 29/301 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           FS F+  + K+YA++EE   R+ IFK NL     H +   S +  +  F DL+  EFRR 
Sbjct: 117 FSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRK 176

Query: 120 YLGLRRKLRLPKD-----ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           YLG ++   L         +   +LP+ +LPA  DWR +G V PVKDQ  CGSCW+FSTT
Sbjct: 177 YLGFKKSRNLKSHHLGVATELLNVLPS-ELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTT 235

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALEGA+   TGKLVSLSEQ+L+DC            +  C+GG MN AF+Y L +GG+ 
Sbjct: 236 GALEGAHCAKTGKLVSLSEQELMDCSR-------AEGNQSCSGGEMNDAFQYVLDSGGIC 288

Query: 235 REEDYPYTGTD---RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
            E+ YPY   D   R  +C+    K+   +    V    E  + A L K+ P+++AI A 
Sbjct: 289 SEDAYPYLARDEECRAQSCE----KVVKILGFKDVPRRSEAAMKAALAKS-PVSIAIEAD 343

Query: 292 YM--QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
            M  Q Y  GV     C   LDHGVLLVGYG+      +  +K +WI+KNSWG  WG +G
Sbjct: 344 QMPFQFYHEGV-FDASCGTDLDHGVLLVGYGTD-----KESKKDFWIMKNSWGTGWGRDG 397

Query: 350 Y 350
           Y
Sbjct: 398 Y 398


>gi|388513209|gb|AFK44666.1| unknown [Lotus japonicus]
 gi|388514955|gb|AFK45539.1| unknown [Lotus japonicus]
          Length = 352

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 135/344 (39%), Positives = 179/344 (52%), Gaps = 34/344 (9%)

Query: 32  IRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           IR V+D  +++L         ++G   H   F+ F  K+ K Y S EE  HRF IF  NL
Sbjct: 30  IRLVSDLEEQVL--------QVIGQTRHAVSFARFASKYGKRYDSVEEIQHRFRIFSENL 81

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
                  K   S   G+  F+DL+  EFR   LG  +        +    L    LPA+ 
Sbjct: 82  ELIKSTNKKRLSYKLGLNHFADLSWDEFRTQKLGAAQNCSATLIGNHK--LTDAVLPAEK 139

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWR++  V  VKDQ  CGSCW+FSTTGALE A   A GK +SLSEQQLVDC    +    
Sbjct: 140 DWRKESIVSEVKDQAHCGSCWTFSTTGALEAAYAQAHGKNISLSEQQLVDCAGAFN---- 195

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
              + GCNGGL + AFEY    GG+  E++YPYT  D   ACKF    +A  V +   ++
Sbjct: 196 ---NFGCNGGLPSQAFEYIKYNGGIALEKEYPYTAKDE--ACKFTAENVAVRVLDSVNIT 250

Query: 269 LD-EDQIAANLVKNGPLAVAINAV-YMQTYIGGVSCPYICSRR---LDHGVLLVGYGSAG 323
           L  ED++   +    P++VA   V   + Y  GV     C      ++H VL VGYG   
Sbjct: 251 LGAEDELKHAVAFARPVSVAFQVVDGFRLYKEGVYTSDTCGNTPMDVNHAVLAVGYGVE- 309

Query: 324 YAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
                    PYWIIKNSWG +WG++GY+K+  G+N+CGV +  S
Sbjct: 310 ------NNVPYWIIKNSWGSTWGDHGYFKMELGKNMCGVATCAS 347


>gi|157868354|ref|XP_001682730.1| cysteine peptidase A (CPA) [Leishmania major strain Friedlin]
 gi|68126185|emb|CAJ07238.1| cysteine peptidase A (CPA) [Leishmania major strain Friedlin]
          Length = 354

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 130/366 (35%), Positives = 182/366 (49%), Gaps = 42/366 (11%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M  +   LF + + +   V  G+       L+ Q   G D  +            A  H+
Sbjct: 1   MARRNPFLFAIVVTILFVVCYGS------ALVAQTPLGVDNFI------------ASAHY 42

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSDLTPAEFRRT 119
             FK++  K++    +  HRF  FK N++ A      +P A + ++ +F+DLTP EF + 
Sbjct: 43  GRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLNTHNPHAHYDVSGKFADLTPQEFAKL 102

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPA--DFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           YL         KD  +   +  + L      DWREKGAV PVK+QG CGSCW+FS  G +
Sbjct: 103 YLNPDYYAHRGKDYKEHVHVDDSVLSGAMSVDWREKGAVTPVKNQGMCGSCWAFSAIGNI 162

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGLMR 235
           E    L    LVSLSEQ LV CD           D GCNGGLM+ A E+ ++   G +  
Sbjct: 163 ESQWALKNHSLVSLSEQMLVSCD---------DIDDGCNGGLMDQAMEWIIQHHNGTVPT 213

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           E+ YPY           DK +  A ++ +  +  DE  IAA + K GP+AVA++A   Q 
Sbjct: 214 EKSYPYASAGGTSPPCHDKGEFGARISGYMSLPHDEKAIAAYVEKKGPVAVAVDATTWQL 273

Query: 296 YIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y GGV    +C    L+HGVL+VG+        +  + PYWI+KNSWG SWGE GY ++ 
Sbjct: 274 YFGGVVT--LCFGLSLNHGVLVVGFN-------KRAKPPYWIVKNSWGTSWGEKGYIRLA 324

Query: 355 RGRNVC 360
            G N C
Sbjct: 325 MGSNQC 330


>gi|151176971|gb|ABR88030.1| digestive cysteine protease [Dermestes frischii]
          Length = 339

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 134/327 (40%), Positives = 172/327 (52%), Gaps = 31/327 (9%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLT 112
           +  +  FK +  K Y S  E   R  IF  N  + A+  KL      S    I +++D+ 
Sbjct: 24  QEQWGTFKLQHKKQYKSDTEEKFRMKIFMENSHKVAKXNKLYEMGLVSYKLKINKYADML 83

Query: 113 PAEFRRTYLGLRRKLRLP-----KDADQAP-ILPTN-DLPADFDWREKGAVGPVKDQGSC 165
             EF  T  G  R    P     +D   A  I P N   P + DWRE GAV  VKDQG C
Sbjct: 84  HHEFVHTVNGFNRTKNTPLLGTSEDEQGATFIAPANVKFPENVDWREHGAVTXVKDQGHC 143

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           GSCWSFS TGALEG +F  T KLVSLSEQ LVDC  +         + GCNGGLM++AF+
Sbjct: 144 GSCWSFSATGALEGQHFRKTNKLVSLSEQNLVDCSTKFG-------NDGCNGGLMDNAFK 196

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPL 284
           Y     G+  E  YPY   D    C ++     A+   F  + + DE+++ A +   GP+
Sbjct: 197 YVKYNHGIDTEASYPYHADDE--KCHYNPKTSGATDRGFVDIPTGDEEKLMAAVATVGPV 254

Query: 285 AVAINAVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           +VAI+A +   Q Y  GV   P   S  LDHGVL+VGYG+          + YWI+KNSW
Sbjct: 255 SVAIDASHESFQLYSEGVYYDPECSSEELDHGVLVVGYGTDENG------QDYWIVKNSW 308

Query: 342 GESWGENGYYKICRGR-NVCGVDSMVS 367
           GESWGE GY K+ R R N CG+ +  S
Sbjct: 309 GESWGEQGYIKMARNRDNNCGIATQAS 335


>gi|260516654|gb|ACX43954.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516656|gb|ACX43955.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516658|gb|ACX43956.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516660|gb|ACX43957.1| cysteine protease 1 [Brachiaria hybrid cultivar]
 gi|260516662|gb|ACX43958.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516664|gb|ACX43959.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516666|gb|ACX43960.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516668|gb|ACX43961.1| cysteine protease 2 [Brachiaria hybrid cultivar]
 gi|260516670|gb|ACX43962.1| cysteine protease 2 [Brachiaria hybrid cultivar]
          Length = 338

 Score =  211 bits (536), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 168/311 (54%), Gaps = 31/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRR 118
           F+ F K+++KAY S  E   RF  FKAN+     H  L + S T G+ +F+DL+  EF+ 
Sbjct: 42  FTAFMKQYSKAY-SHAEFSSRFNQFKANVETIRLHNTLANASYTMGLNEFADLSFEEFKG 100

Query: 119 TYLGLR---RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
            Y G +   R+     +  Q         P   DWR   AV P+KDQG CGSCW+FS TG
Sbjct: 101 KYFGYKHVEREFARSNNLHQ----EVEAAPTSIDWRTSNAVTPIKDQGQCGSCWAFSATG 156

Query: 176 ALEGANFLATGK--LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           ++EGA ++  GK  L SLSEQQLVDC            ++GCNGGLM+ AFEY +   G+
Sbjct: 157 SIEGA-WVLQGKHTLTSLSEQQLVDCSTSYG-------NAGCNGGLMDYAFEYIIANKGI 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--V 291
             E  YPY G   G  C+   +K+        V S DE  +   +   GP++VAI A   
Sbjct: 209 CAESAYPYKGV--GGLCQKSCTKVVTISGYKDVASGDEASLLNAVGTVGPVSVAIEADQA 266

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
             Q Y  GV     C   LDHGVL VGYG+ G        + YWI+KNSWG SWGE+GY 
Sbjct: 267 GFQFYSSGVFSG-TCGHNLDHGVLAVGYGTTG-------SQDYWIVKNSWGTSWGESGYI 318

Query: 352 KICRGRNVCGV 362
           ++ R +N CG+
Sbjct: 319 RMIRNKNQCGI 329


>gi|90399361|emb|CAJ86180.1| H0212B02.7 [Oryza sativa Indica Group]
          Length = 470

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/334 (37%), Positives = 177/334 (52%), Gaps = 41/334 (12%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  +   A   ++ +K +  K Y +  E + R+  F+ NLR    H     + 
Sbjct: 25  IVSYGERSEEE---ARRLYAEWKAEHGKNYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 81

Query: 102 TH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLGLR K R  +      +   N+ LP   DWR KGAV
Sbjct: 82  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 141

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             +KDQG CGSCW+FS   A+EG N + TG L+SLSEQ+LVDCD         S + GCN
Sbjct: 142 AEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCN 193

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACK-------------FDKSKIAASVAN 263
           GGLM+ AF++ +  GG+  E+DYPY G D    C              F K+    ++ +
Sbjct: 194 GGLMDYAFDFIINNGGIDTEDDYPYKGKD--ERCDVNRVSFVFFAPLVFQKNAKVVTIDS 251

Query: 264 FSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGS 321
           +  V+ + +      V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+
Sbjct: 252 YEDVTPNSETSLQKAVANQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGT 310

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
                     K YWI++NSWG+SWGE+GY ++ R
Sbjct: 311 E-------NGKDYWIVRNSWGKSWGESGYVRMER 337


>gi|94421564|gb|ABF18889.1| cathepsin-L [Lygus lineolaris]
          Length = 314

 Score =  211 bits (536), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 126/301 (41%), Positives = 165/301 (54%), Gaps = 26/301 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIF----KANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           +K K+ K Y S E    R TI+    +  +   AR ++   S   G+  F+D+   EFR+
Sbjct: 30  YKAKYGKTYESNENEAARRTIYFMAKEKVMEHNARFEQGLVSYKLGLNSFADMHNGEFRK 89

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
              G RR    P+++    +     LPA  DWR KGAV P+K+QG CGSCW+FSTTG+LE
Sbjct: 90  MMNGYRRGT--PRNSVVVHVESNITLPASVDWRTKGAVTPIKNQGQCGSCWAFSTTGSLE 147

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G + L  GKLVSLSEQ+LVDC            + GC+GGLM+ AF Y  K  G+  E+ 
Sbjct: 148 GQHALKKGKLVSLSEQELVDC-------SAAEGNDGCDGGLMDDAFTYIKKNNGIDTEQS 200

Query: 239 YPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY--MQT 295
           YPYTG D    C F KS +AA+V  F  V S  E  +       GP++VAI+A     Q 
Sbjct: 201 YPYTGED--GTCSFKKSDVAATVTGFVDVTSGSESGLQDASATIGPISVAIDASSWDFQL 258

Query: 296 YIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y  GV     CS   LDHGVL+VGYG+            YW++KNSWG  WG +GY ++ 
Sbjct: 259 YESGVYDVSDCSTTELDHGVLVVGYGTD-------DGTAYWLVKNSWGTDWGHHGYIQMS 311

Query: 355 R 355
           R
Sbjct: 312 R 312


>gi|426219875|ref|XP_004004143.1| PREDICTED: cathepsin L1 [Ovis aries]
          Length = 333

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 171/317 (53%), Gaps = 23/317 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPA 114
            + L+K    K Y   EE   R  ++K N++    H +      H  +     F DLT  
Sbjct: 28  QWELWKAVHRKPYDLNEE-GWRKAVWKKNMKMIELHNQEYSQGKHSFSMAMNAFGDLTSE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EFR+   G +R+           I  +  +P   DWREKG V PVK+QG CGSCW+FSTT
Sbjct: 87  EFRQMMNGFQRQENKKGKVFHETIFAS--IPPSVDWREKGYVTPVKNQGKCGSCWAFSTT 144

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALEG  F  TGKLVSLSEQ LVDC     PE     + GC+GGLM++AF+Y L  GGL 
Sbjct: 145 GALEGQMFRKTGKLVSLSEQNLVDCSQ---PE----GNRGCHGGLMDNAFQYVLDVGGLD 197

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--Y 292
            EE YPYTG      C ++    AA+   F  +   E+ +   +   GP++VA++A    
Sbjct: 198 SEESYPYTGLVG--TCNYNPKNSAANETGFVDLPKQENALMKAVATLGPISVAVDASNPS 255

Query: 293 MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Q Y  G+     C S  +DHGVL+VGYG  G       +  YW++KNSWG+ WG NGY 
Sbjct: 256 FQFYKSGIYYEPKCKSESVDHGVLVVGYGFEG---ADSDDNKYWLVKNSWGKHWGINGYI 312

Query: 352 KICRGRNV-CGVDSMVS 367
           K+ + +N  CG+ +M S
Sbjct: 313 KMAKDQNNHCGIATMAS 329


>gi|164472556|gb|ABY58967.1| cathepsin L [Toxoplasma gondii]
          Length = 421

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/301 (42%), Positives = 169/301 (56%), Gaps = 29/301 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           FS F+  + K+YA++EE   R+ IFK NL     H +   S +  +  F DL+  EFRR 
Sbjct: 116 FSSFQAMYAKSYATEEEKQRRYAIFKNNLVYIHTHNQQGYSYSLKMNHFGDLSRDEFRRK 175

Query: 120 YLGLRRKLRLPKD-----ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           YLG ++   L         +   +LP+ +LPA  DWR +G V PVKDQ  CGSCW+FSTT
Sbjct: 176 YLGFKKSRNLKSHHLGVATELLNVLPS-ELPAGVDWRSRGCVTPVKDQRDCGSCWAFSTT 234

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALEGA+   TGKLVSLSEQ+L+DC            +  C+GG MN AF+Y L +GG+ 
Sbjct: 235 GALEGAHCAKTGKLVSLSEQELMDCSR-------AEGNQSCSGGEMNDAFQYVLDSGGIC 287

Query: 235 REEDYPYTGTD---RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
            E+ YPY   D   R  +C+    K+   +    V    E  + A L K+ P+++AI A 
Sbjct: 288 SEDAYPYLARDEECRAQSCE----KVVKILGFKDVPRRSEAAMKAALAKS-PVSIAIEAD 342

Query: 292 YM--QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
            M  Q Y  GV     C   LDHGVLLVGYG+      +  +K +WI+KNSWG  WG +G
Sbjct: 343 QMPFQFYHEGV-FDASCGTDLDHGVLLVGYGTD-----KESKKDFWIMKNSWGTGWGRDG 396

Query: 350 Y 350
           Y
Sbjct: 397 Y 397


>gi|225706370|gb|ACO09031.1| Cathepsin L precursor [Osmerus mordax]
          Length = 337

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 172/321 (53%), Gaps = 23/321 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           + H+ L+K   +K Y  ++E   R  +++ NL++   H        H    G+  F D+T
Sbjct: 26  DEHWDLWKSWHSKNYQHEKEEGWRRMVWEKNLKKIEMHNLEHSLGKHSYSLGMNHFGDMT 85

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSF 171
             EFR+   G   KL+  K      + P N + P   DWRE+G V PVKDQG CGSCW+F
Sbjct: 86  NEEFRQVMNGY--KLQQRKFKGSLFLEPNNMEAPKQVDWREEGYVTPVKDQGQCGSCWAF 143

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           STTGA+EG  F  T KLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y     
Sbjct: 144 STTGAMEGQMFRKTQKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIQDNS 196

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINA 290
           GL  EE YPY GTD    C +     AA+   F  + S  E  +   +   GP++VAI+A
Sbjct: 197 GLDSEEAYPYLGTDD-QPCNYKAEFSAANDTGFMDIPSGKEHALMKAIASVGPVSVAIDA 255

Query: 291 VY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
            +   Q Y  G+     C S  LDHGVL VGYG  G     +  K YWI+KNSW E WG+
Sbjct: 256 GHESFQFYQSGIYYEKECSSEELDHGVLAVGYGFEGE---DVDGKKYWIVKNSWSEKWGD 312

Query: 348 NGYYKICRGR-NVCGVDSMVS 367
            GY  + + R N CG+ +  S
Sbjct: 313 KGYILMAKDRKNHCGIATAAS 333


>gi|37780039|gb|AAP32192.1| cysteine protease 14 [Trifolium repens]
          Length = 351

 Score =  210 bits (535), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 122/316 (38%), Positives = 174/316 (55%), Gaps = 25/316 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  +  K Y + EE   RF +FK NL+      K+  +   G+ +F+DL+  EF+  
Sbjct: 47  FESWMSRHGKIYETIEEKLLRFEVFKDNLKHIDDRNKIVSNYWLGLNEFADLSHQEFKNK 106

Query: 120 YLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           YLGL+  L   +++         D  LP   DWR+KGAV PVK+QG CGSCW+FST  A+
Sbjct: 107 YLGLKVDLSQRRESSNEEEFTYRDVDLPKSVDWRKKGAVTPVKNQGQCGSCWAFSTVAAV 166

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG N + TG L SLSEQ+L+DCD         + ++GCNGGLM+ AF +  + GGL +EE
Sbjct: 167 EGINQIVTGNLTSLSEQELIDCDT--------TYNNGCNGGLMDYAFSFIGQNGGLHKEE 218

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQT 295
           DYPY   +     K +++++  ++  +  V  + +Q     + N PL+VAI A     Q 
Sbjct: 219 DYPYIMEESTCEMKKEETQV-VTINGYHDVPQNNEQSLLKALANQPLSVAIEASSRDFQF 277

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           Y GGV   + C   LDHGV  VGYG++       K   Y I+KNSWG  WGE G+ ++ R
Sbjct: 278 YSGGVFDGH-CGSDLDHGVSAVGYGTS-------KNLDYIIVKNSWGAKWGEKGFIRMKR 329

Query: 356 G----RNVCGVDSMVS 367
                  +CG+  M S
Sbjct: 330 DIGKPEGICGLYKMAS 345


>gi|313224805|emb|CBY20597.1| unnamed protein product [Oikopleura dioica]
          Length = 343

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 170/315 (53%), Gaps = 24/315 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH-QKLDPSATHGITQFSDLTPAEFRR 118
           F  ++ +F+K Y + EE   R   F  N      H Q+ D + T G+   +DLT +EF+ 
Sbjct: 42  FRQYEVEFSKMYETAEERRIRAQTFSKNFEMITSHNQREDVTWTMGLNFDADLTFSEFQS 101

Query: 119 TYLGLRRKLRLPKDAD-QAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            YL + +        D    IL    LP +FDWRE G V PVK+QG CGSCW+FSTTG L
Sbjct: 102 RYLMVSQDCSATSTRDLDIDILS---LPENFDWREHGGVSPVKNQGHCGSCWTFSTTGCL 158

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           E A+ +   K  +LSEQQLVDC  + D       + GCNGGL + AFEY    GGL  E+
Sbjct: 159 ESAHLIHHKKAYNLSEQQLVDCAQDFD-------NHGCNGGLPSHAFEYIHYVGGLEEEQ 211

Query: 238 DYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVY-MQT 295
           DY Y   +    C+FD +K A +V   F++   DEDQ+   L    P++VA   V   + 
Sbjct: 212 DYSYHAEEG--LCEFDPTKTAGTVREVFNITETDEDQLTIALAYFNPVSVAFEVVDGFRF 269

Query: 296 YIGGVSCPYICS---RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Y  GV     C      ++H VL VGYG       +  E PY+I+KNSWG  WG+ G++K
Sbjct: 270 YKEGVYQSDTCKSGPEDVNHAVLAVGYGMC-----KKCETPYFIVKNSWGAEWGDEGFFK 324

Query: 353 ICRGRNVCGVDSMVS 367
           I RG N+CG+ +  S
Sbjct: 325 IKRGENMCGIATCAS 339


>gi|2499879|sp|Q40143.1|CYSP3_SOLLC RecName: Full=Cysteine proteinase 3; Flags: Precursor
 gi|1235545|emb|CAA88629.1| pre-pro-cysteine proteinase [Solanum lycopersicum]
          Length = 356

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 147/377 (38%), Positives = 193/377 (51%), Gaps = 36/377 (9%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVT---DGGDEILSHHESTNNDLLGAE 57
           M   ++VL LV+ +  +A++      D +  IRQV    +  + IL     T + L    
Sbjct: 1   MSRLSLVLILVAGLFATALAGPATFADKNP-IRQVVFPDELENGILQVVGQTRSAL---- 55

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
             F+ F  +  K Y S EE   RF IF  NL+    H +   S   GI +F+DLT  EFR
Sbjct: 56  -SFARFAIRHRKRYDSVEEIKQRFEIFLDNLKMIRSHNRKGLSYKLGINEFTDLTWDEFR 114

Query: 118 RTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           +  LG  +        +    L    LP   DWR+ G V PVK QG CGSCW+FSTTGAL
Sbjct: 115 KHKLGASQNCSATTKGNLK--LTNVVLPETKDWRKDGIVSPVKAQGKCGSCWTFSTTGAL 172

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           E A   A GK +SLSEQQLVDC    +       + GCNGGL + AFEY    GGL  EE
Sbjct: 173 EAAYAQAFGKGISLSEQQLVDCAGAFN-------NFGCNGGLPSQAFEYIKFNGGLDTEE 225

Query: 238 DYPYTGTDRGHACKFDKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-M 293
            YPYTG  +   CKF ++ I   V    N ++ +  E + A  LV+  P++VA   V   
Sbjct: 226 AYPYTG--KNGICKFSQANIGVKVISSVNITLGAEYELKYAVALVR--PVSVAFEVVKGF 281

Query: 294 QTYIGGVSCPYICS---RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
           + Y  GV     C      ++H VL VGYG            PYW+IKNSWG  WGE+GY
Sbjct: 282 KQYKSGVYASTECGDTPMDVNHAVLAVGYGVE-------NGTPYWLIKNSWGADWGEDGY 334

Query: 351 YKICRGRNVCGVDSMVS 367
           +K+  G+N+CGV +  S
Sbjct: 335 FKMEMGKNMCGVATCAS 351


>gi|403300987|ref|XP_003941193.1| PREDICTED: cathepsin L2 [Saimiri boliviensis boliviensis]
          Length = 333

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 126/313 (40%), Positives = 167/313 (53%), Gaps = 23/313 (7%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRR 118
           +K    + Y++ EE   R  +++ N++    H        HG T     F D+T  EFR+
Sbjct: 32  WKATHRRLYSTNEEGWRR-AVWEKNMKMIELHNGEYSRGKHGFTMAMNAFGDMTNEEFRQ 90

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
             +  R +        + P+L   DLP   DWR+KG V PVK+Q  CGSCW+FS TGALE
Sbjct: 91  VMVCFRNQKHKNGKVFRGPLLL--DLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGALE 148

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G  F  TGKLVSLSEQ LVDC     P+     + GCNGG MN AF Y  + GGL  E  
Sbjct: 149 GQMFRKTGKLVSLSEQNLVDCSR---PQG----NQGCNGGFMNYAFRYVKENGGLDSEAS 201

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           YPY   D    CK+      A+   F V+   E ++   +   GP++VA++A +   Q Y
Sbjct: 202 YPYEAKD--GICKYKPENSVANDTGFVVIPTHEKELMKAVATVGPISVAVDASHSSFQFY 259

Query: 297 IGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
             G+     C S+ LDHGVL+VGYG  G      K+  YW+IKNSWG  WG NGY KI +
Sbjct: 260 KSGIYFEKKCSSKNLDHGVLVVGYGFEG---ANSKDNKYWLIKNSWGPEWGLNGYIKIAK 316

Query: 356 GRNV-CGVDSMVS 367
            +N  CG+ +  S
Sbjct: 317 DQNNHCGIATAAS 329


>gi|323451241|gb|EGB07119.1| hypothetical protein AURANDRAFT_54023 [Aureococcus anophagefferens]
          Length = 377

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 130/333 (39%), Positives = 179/333 (53%), Gaps = 22/333 (6%)

Query: 51  NDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI-TQFS 109
            D+      F  F  KF K Y + EE  HR T+F  N +    H         G+  QF+
Sbjct: 56  TDVEAVHEAFMTFMTKFEKTYETVEEWAHRLTVFAQNAKIVLEHDAKAEGFALGLDNQFA 115

Query: 110 DLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           D T  EF  +Y  L  + + P  A     +     P   DWR +G V  +K+QGSCGSCW
Sbjct: 116 DWTAEEFA-SYQKLHSRPK-PSQAGATHEVSDKAAPTAVDWRTEGVVADIKNQGSCGSCW 173

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FST  ++EGA    TGKLV+LSEQ LVDC  +   +    C  GC+GGLM++AF+Y +K
Sbjct: 174 TFSTVVSIEGAAARKTGKLVTLSEQNLVDCVKKDQIDGGDECCMGCSGGLMDNAFDYIIK 233

Query: 230 A--GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAV 286
              GG+  E  Y YTG D    C FDK+ + A+++N++ V++ DE  +A  L   GP+++
Sbjct: 234 NQDGGIDTEASYGYTGKDG--TCAFDKANVGATISNWTDVAVGDEVALADALANAGPVSI 291

Query: 287 AINAV-YMQTYIGGVSCPYI---CSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
           A++A    Q Y GG+  P     CS      DHGV +VGYG+            YW I+N
Sbjct: 292 ALDASKQWQLYSGGILKPRSILGCSSDPTHADHGVAIVGYGTD-------DGVDYWWIRN 344

Query: 340 SWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           SWG +WGE+GY ++ RG N CGV +  S   AA
Sbjct: 345 SWGTTWGESGYMRLERGVNACGVANFASYPIAA 377


>gi|169659203|dbj|BAG12786.1| putative cysteine protease [Sorogena stoianovitchae]
          Length = 293

 Score =  210 bits (535), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 175/311 (56%), Gaps = 35/311 (11%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLG 122
            + ++NK Y   E+  HR  +F  ++R          S T G+ QF+DLT  EF   YLG
Sbjct: 9   LEGEYNKTYGGAEDK-HRLALFAESVRIVETENAKGHSYTLGLNQFADLTTEEFSSLYLG 67

Query: 123 LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
           L  + ++   A ++ +L   D   + DWR+KGAV PVKDQ SCGSCW+FS TGA+EGA  
Sbjct: 68  LVLENKV--QASESVVLQDGDSEENVDWRQKGAVTPVKDQKSCGSCWAFSATGAMEGALV 125

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
            +TGKL++LSEQQLVDC  +C+         GCNGGLM +AF+Y L   G   E+DYPY 
Sbjct: 126 KSTGKLINLSEQQLVDCVTKCN---------GCNGGLMTAAFDYVL-GRGRATEKDYPYK 175

Query: 243 GTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV-YMQTYIGGVS 301
           G D    CK  ++     +  ++ V  +  +     V + PL+VA+NA   +Q Y  GV 
Sbjct: 176 GVD--GRCK--QTATDNKIKGYNNVPQNNYKALKAAVAS-PLSVAVNAAGTIQRYKSGV- 229

Query: 302 CPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRN--- 358
               C  RLDHGVL VGY          + + YWI+KNSWG  +GENGY+++  G     
Sbjct: 230 IDANCGTRLDHGVLAVGY----------QGEDYWIVKNSWGNGYGENGYFRVKMGTQNGG 279

Query: 359 --VCGVDSMVS 367
             VCG++ M +
Sbjct: 280 AGVCGINMMAA 290


>gi|146152090|gb|ABQ08058.1| cathepsin L [Misgurnus mizolepis]
          Length = 337

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 172/320 (53%), Gaps = 25/320 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H+  +K    K Y  +EE   R  I++ NLR+   H        H    G+  F D+   
Sbjct: 28  HWEQWKTWHGKNYHEKEE-GWRRMIWEKNLRKIQFHNLEHSMGIHTYRLGMNHFGDMNHE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EFR+   G + K    +    +  +  N  ++P+  DWREKG V PVKDQG CGSCW+FS
Sbjct: 87  EFRQVMNGYKHKTE--RKFKGSLFMEPNFLEVPSKLDWREKGYVTPVKDQGECGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGA+EG  F   GKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y     G
Sbjct: 145 TTGAMEGQMFRKQGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDNNG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           L  EE YPY GTD    C +D    AA+   F  + S  E  +   +   GP++VAI+A 
Sbjct: 198 LDSEEAYPYLGTDD-QPCHYDPKYNAANDTGFVDIPSGKEHALMKAVASVGPVSVAIDAG 256

Query: 292 Y--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  G+     C S  LDHGVL+VGYG  G     +  K YWI+KNSW ESWG+ 
Sbjct: 257 HESFQFYQSGIYFEKECSSEELDHGVLVVGYGFEG---EDVDGKKYWIVKNSWSESWGDK 313

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  + + R N CG+ +  S
Sbjct: 314 GYIYMAKDRKNHCGIATAAS 333


>gi|255539310|ref|XP_002510720.1| cysteine protease, putative [Ricinus communis]
 gi|223551421|gb|EEF52907.1| cysteine protease, putative [Ricinus communis]
          Length = 349

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 173/325 (53%), Gaps = 26/325 (8%)

Query: 52  DLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQF 108
           DL   +    LF+    +F + Y S EE   RF IFK NL       K   +   G+ +F
Sbjct: 36  DLTSNDKLIDLFESWISRFGRVYESAEEKLERFEIFKDNLFHIDDTNKKVRNYWLGLNEF 95

Query: 109 SDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSC 168
           +DL+  EF+  YLGL+  L       +        +P   DWR+KGAV PVK+QGSCGSC
Sbjct: 96  ADLSHEEFKNKYLGLKPDLSKRAQCPEEFTYKDVAIPKSVDWRKKGAVTPVKNQGSCGSC 155

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           W+FST  A+EG N + TG L SLSEQ+L+DCD         + ++GCNGGLM+ AF Y +
Sbjct: 156 WAFSTVAAVEGINQIVTGNLTSLSEQELIDCDT--------TYNNGCNGGLMDYAFAYIV 207

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 288
             GGL +EEDYPY   + G      +   A +++ +  V  + ++     + N PL++AI
Sbjct: 208 ANGGLHKEEDYPYI-MEEGTCDMRKEESDAVTISGYHDVPQNSEESLLKALANQPLSIAI 266

Query: 289 NAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
            A     Q Y GGV   + C   LDHGV  VGYG++       K   Y I+KNSWG  WG
Sbjct: 267 EASGRDFQFYSGGVFDGH-CGTELDHGVAAVGYGTS-------KGLDYIIVKNSWGPKWG 318

Query: 347 ENGYYKICRG----RNVCGVDSMVS 367
           E GY ++ R       +CG+  M S
Sbjct: 319 EKGYIRMKRKTSKPEGICGIYKMAS 343


>gi|6978721|ref|NP_037071.1| pro-cathepsin H precursor [Rattus norvegicus]
 gi|115729|sp|P00786.1|CATH_RAT RecName: Full=Pro-cathepsin H; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|55886|emb|CAA68699.1| cathepsin H pre-pro-peptide [Rattus norvegicus]
 gi|55391460|gb|AAH85352.1| Cathepsin H [Rattus norvegicus]
 gi|149018921|gb|EDL77562.1| cathepsin H, isoform CRA_a [Rattus norvegicus]
 gi|226475|prf||1514114A cathepsin H
          Length = 333

 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 174/318 (54%), Gaps = 31/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF+ + K+  K Y+S+E + HR  +F  N R+   H + + +   G+ QFSD++ AE + 
Sbjct: 32  HFTSWMKQHQKTYSSRE-YSHRLQVFANNWRKIQAHNQRNHTFKMGLNQFSDMSFAEIKH 90

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTT 174
            YL        P++        +  T   P+  DWR+KG  V PVK+QG+CGSCW+FSTT
Sbjct: 91  KYL-----WSEPQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTT 145

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +A+GK+++L+EQQLVDC    +       + GC GGL + AFEY L   G+M
Sbjct: 146 GALESAVAIASGKMMTLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYILYNKGIM 198

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G  +   CKF+  K  A V N   ++L DE  +   +    P++ A      
Sbjct: 199 GEDSYPYIG--KNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTED 256

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  GV     C +   +++H VL VGYG             YWI+KNSWG +WG NG
Sbjct: 257 FMMYKSGVYSSNSCHKTPDKVNHAVLAVGYGEQ-------NGLLYWIVKNSWGSNWGNNG 309

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG+N+CG+ +  S
Sbjct: 310 YFLIERGKNMCGLAACAS 327


>gi|340370276|ref|XP_003383672.1| PREDICTED: digestive cysteine proteinase 2-like [Amphimedon
           queenslandica]
          Length = 327

 Score =  210 bits (534), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 128/321 (39%), Positives = 177/321 (55%), Gaps = 32/321 (9%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA--THGITQFSDLTPAE 115
             F  +K K+NK Y ++E    R  I+++N +    H         T  + +F+DL   E
Sbjct: 22  QEFQDWKVKYNKVYETKETELERQIIWESNKKFVENHNANSDKFGFTVAMNEFADLDAGE 81

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           F R + GL   L  P   +   I   +   +P   DW+EKGAV P+K+QG CGSCWSFS+
Sbjct: 82  FGRIFNGL---LPRPSSYNSTNIYKPSGVKVPDTVDWKEKGAVTPIKNQGQCGSCWSFSS 138

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TG+LEG +F+ TG LVSLSEQQL+DC  +         + GCNGGLM+++F Y     G 
Sbjct: 139 TGSLEGQHFINTGTLVSLSEQQLMDCSTKYG-------NHGCNGGLMDNSFRYLKSVAGD 191

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL---DEDQIAANLVKNGPLAVAINA 290
             E++YPYT  +    C++D S   A V + S V +   DED +   +   GP++VAI+A
Sbjct: 192 ETEDNYPYTAEN--GVCRYDSS--LAVVTDKSYVDIPQGDEDSLKDAVANVGPISVAIDA 247

Query: 291 VY--MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
            +   Q Y  GV     CS  +LDHGVL +GYG+          K YW++KNSWG SWG 
Sbjct: 248 SHSSFQLYNSGVYYASTCSSTQLDHGVLAIGYGTE-------DGKDYWLVKNSWGTSWGM 300

Query: 348 NGYYKICRGR-NVCGVDSMVS 367
            GY K+ R R N CG+ +  S
Sbjct: 301 EGYIKMSRNRNNNCGIATQAS 321


>gi|118127|sp|P25251.1|CYSP4_BRANA RecName: Full=Cysteine proteinase COT44; Flags: Precursor
          Length = 328

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/290 (40%), Positives = 168/290 (57%), Gaps = 27/290 (9%)

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLR----RKLRL 129
           + D RF IFK NLR    H + + +AT+  G+T F++LT  E+R  YLG R    R++  
Sbjct: 24  QQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITK 83

Query: 130 PKDADQ--APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
            K+ +   +  +  +++P   DWR+KGAV  +KDQG+CGSCW+FST  A+EG N + TG+
Sbjct: 84  AKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGE 143

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           LVSLSEQ+LVDCD         S + GCNGGLM+ AF++ +K GGL  E+DYPY GT+ G
Sbjct: 144 LVSLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTN-G 194

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYI 305
                 K+    ++  +  V   ++      V   P++VAI+A     Q Y  G+     
Sbjct: 195 KCNSLLKNSRVVTIDGYEDVPSKDETALKRAVSYQPVSVAIDAGGRAFQHYQSGIFTGK- 253

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           C   +DH V+ VGYGS            YWI++NSWG  WGE+GY ++ R
Sbjct: 254 CGTNMDHAVVAVGYGSENGV-------DYWIVRNSWGTRWGEDGYIRMER 296


>gi|426248750|ref|XP_004018122.1| PREDICTED: pro-cathepsin H [Ovis aries]
          Length = 355

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/319 (40%), Positives = 175/319 (54%), Gaps = 33/319 (10%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  +  +  K Y+S+E H HR  +F +NLR    H   + +   G+ QFSD++ AE +R
Sbjct: 54  HFQSWMVQHQKKYSSEEYH-HRLQVFASNLREINAHNARNHTFKMGLNQFSDMSFAELKR 112

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTT 174
            YL        P++        +  T   P   DWREKG  V PVK+QGSCGSCW+FSTT
Sbjct: 113 KYL-----WSEPQNCSATKSNYLRGTGPYPPSMDWREKGNFVTPVKNQGSCGSCWTFSTT 167

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +ATGKL  L+EQQLVDC    +       + GC GGL + AFEY     G+M
Sbjct: 168 GALESAVAIATGKLPFLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIM 220

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVA--INAV 291
            E+ YPY G D    CK+  SK  A V + + ++L DE+ +   +    P++ A  + A 
Sbjct: 221 GEDTYPYRGEDGD--CKYQPSKAIAFVKDVANITLNDEEAMVEAVALYNPVSFAFEVTAD 278

Query: 292 YMQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +M  Y  G+     C +   +++H VL VGYG         K  PYWI+KNSWG  WG  
Sbjct: 279 FM-MYRKGIYSSTSCHKTPDKVNHAVLAVGYGEE-------KGIPYWIVKNSWGPHWGMK 330

Query: 349 GYYKICRGRNVCGVDSMVS 367
           GY+ I RG+N+CG+ +  S
Sbjct: 331 GYFLIERGKNMCGLAACAS 349


>gi|394331818|gb|AFN27128.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 167/312 (53%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
           ++E    LA  +L +LSE  LV C  +         +SGC GGLM  AFE+ L+   G +
Sbjct: 158 SIESQWALAGHRLTALSEHHLVSCHDK---------NSGCTGGLMLQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S      A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEDSYPYVSSS-GYVPECSNSSQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y  GV  SC  I    L+HGVLLVGY   G       E PYW+IKNSWGE+WGEN
Sbjct: 268 SSFMSYQSGVLTSCAGI---SLNHGVLLVGYNRTG-------EVPYWVIKNSWGENWGEN 317

Query: 349 GYYKICRGRNVC 360
           GY ++  G N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|224083362|ref|XP_002306996.1| predicted protein [Populus trichocarpa]
 gi|222856445|gb|EEE93992.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/316 (40%), Positives = 177/316 (56%), Gaps = 26/316 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  K  K Y S EE  HRF IFK NL       K   +   G+ +F+DL+  EF+  
Sbjct: 33  FESWISKHQKIYESIEEKWHRFEIFKDNLFHIDETNKKVVNYWLGLNEFADLSHEEFKNK 92

Query: 120 YLGLRRKLRLPKD-ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           YLGL   L   ++ +++      + +P   DWR+KGAV  VK+QGSCGSCW+FST  A+E
Sbjct: 93  YLGLNVDLSNRRECSEEFTYKDVSSIPKSVDWRKKGAVTDVKNQGSCGSCWAFSTVAAVE 152

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G N + TG L SLSEQ+LVDCD         + ++GCNGGLM+ AF Y +  GGL +EED
Sbjct: 153 GINQIVTGNLTSLSEQELVDCDT--------TYNNGCNGGLMDYAFAYIISNGGLHKEED 204

Query: 239 YPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQT 295
           YPY   + G  C+  K++    +++ +  V  + ++     + N PL+VAI+A     Q 
Sbjct: 205 YPYI-MEEG-TCEMRKAESEVVTISGYHDVPQNSEESLLKALANQPLSVAIDASGRDFQF 262

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           Y GGV   + C   LDHGV  VGYGSA       K   + ++KNSWG  WGE G+ ++ R
Sbjct: 263 YSGGVFDGH-CGTELDHGVAAVGYGSA-------KGLDFIVVKNSWGSKWGEKGFIRMKR 314

Query: 356 GR----NVCGVDSMVS 367
                  +CG++ M S
Sbjct: 315 NTGKPAGLCGINKMAS 330


>gi|15617524|ref|NP_258322.1| cathepsin-like cysteine proteinase [Spodoptera litura NPV]
 gi|37077642|sp|Q91BH1.1|CATV_NPVST RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|15553260|gb|AAL01738.1|AF325155_50 cathepsin-like cysteine proteinase [Spodoptera litura NPV]
          Length = 337

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/332 (37%), Positives = 176/332 (53%), Gaps = 34/332 (10%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           D+  A  ++  F K+ NK Y + ++ D  F  FK NL        +   A +GI +FSD+
Sbjct: 25  DIDSASVYYENFIKQHNKEYTTPDQRDAAFVNFKRNLADMNAMNNVSNQAVYGINKFSDI 84

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPIL---------PTNDLPADFDWREKGAVGPVKDQ 162
               F   + GL   L    D++  P           P+   P  FDWR+   V  VK+Q
Sbjct: 85  DKITFVNEHAGLVSNLINSTDSNFDPYRLCEYVTVAGPSARTPESFDWRKLNKVTKVKEQ 144

Query: 163 GSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNS 222
           G CGSCW+F+  G +E    +    L+ LSEQQL+DCD           D GC+GGLM+ 
Sbjct: 145 GVCGSCWAFAAIGNIESQYAIMHDSLIDLSEQQLLDCDR---------VDQGCDGGLMHL 195

Query: 223 AFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKN 281
           AF+  ++ GG+  E DYPY G +  +AC+   SK+A  +++     L DE ++   L KN
Sbjct: 196 AFQEIIRIGGVEHEIDYPYQGIE--YACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKN 253

Query: 282 GPLAVAINAVYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNS 340
           GP+AVAI+ V +  Y  G++   +C+   L+H VLLVGYG          + PYWI KNS
Sbjct: 254 GPIAVAIDCVDIIDYRSGIAT--VCNDNGLNHAVLLVGYGIE-------NDTPYWIFKNS 304

Query: 341 WGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
           WG +WGENGY++  R  N CG   M++  AA+
Sbjct: 305 WGSNWGENGYFRARRNINACG---MLNEFAAS 333


>gi|449513868|ref|XP_002191976.2| PREDICTED: cathepsin L1-like [Taeniopygia guttata]
          Length = 443

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 141/350 (40%), Positives = 184/350 (52%), Gaps = 27/350 (7%)

Query: 29  DQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           +Q+I    +   E L      + +L G   H+ L+K    K Y  +EE   R  +++ NL
Sbjct: 106 NQVIPVTKENSTETLHCRWQVDPELDG---HWQLWKSWHRKDYHEREE-GWRRVVWEKNL 161

Query: 89  RRAARHQKLDPSATH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDL 144
           +    H        H    G+ QF D+T  EFR+   G   K +  +    +  L  N L
Sbjct: 162 KMIEIHNLDHALGKHSYKLGMNQFGDMTTEEFRQLMNGYVHK-KSERKYRGSQFLEPNFL 220

Query: 145 --PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHE 202
             P   DWREKG V PVKDQG CGSCW+FSTTGALEG +F  TGKLVSLSEQ LVDC   
Sbjct: 221 EAPRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRKTGKLVSLSEQNLVDCSR- 279

Query: 203 CDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVA 262
             PE     + GCNGGLM+ AF+Y    GG+  EE YPYT  D    C++     AA+  
Sbjct: 280 --PE----GNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKD-DEDCRYKAEYNAANDT 332

Query: 263 NF-SVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSRR-LDHGVLLVG 318
            F  +    E  +   +   GP++VAI+A +   Q Y  G+     CS   LDHGVL+VG
Sbjct: 333 GFVDIPQGHERALMKAVAAVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVG 392

Query: 319 YGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           YG  G     +  K YWI+KNSWGE WG+ GY  + + R N CG+ +  S
Sbjct: 393 YGFEGED---VDGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAAS 439


>gi|44844204|emb|CAF32698.1| cysteine proteinase [Leishmania infantum]
          Length = 443

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/311 (41%), Positives = 166/311 (53%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK  G+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKXXGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E     A   LVSLSEQQLV CD +         D+GCNGGLM  AFE  L+   G +
Sbjct: 158 NIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEXLLRHMYGIV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKI--AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPYT  +   A   + SK+   A +  + ++  +E  +AA L +NGP+A+A++A 
Sbjct: 209 FTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC       L+HGVLLVGY   G         PYW+IKNSWGE WGE G
Sbjct: 269 SFMSYQSGVLTSCA---GDALNHGVLLVGYNKTGGV-------PYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVVMGXNAC 329


>gi|260819200|ref|XP_002604925.1| hypothetical protein BRAFLDRAFT_77225 [Branchiostoma floridae]
 gi|229290254|gb|EEN60935.1| hypothetical protein BRAFLDRAFT_77225 [Branchiostoma floridae]
          Length = 520

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/348 (37%), Positives = 181/348 (52%), Gaps = 43/348 (12%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
           H  S +K + N+ Y + +E   RF  F+ NL +  +             QF+D++  EFR
Sbjct: 173 HFASQWKHEHNRRYKTADEEKARFATFQDNLLKIEKLNAEYSGTEFATNQFADMSEEEFR 232

Query: 118 RTYLGLRRKLRLPKDA----DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
              L   R            D   +   NDLP  ++W + GAV P+KDQGS GSCW+FST
Sbjct: 233 SKILMRPRPPPQHPRERYLRDYGEV---NDLPEAYNWVDHGAVTPIKDQGSAGSCWAFST 289

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
              LEG  FL    L +LS +Q+VDCD   DP+  G+ D G  GG    AF+Y  + GG+
Sbjct: 290 IENLEGQWFLTKHPLTNLSVEQVVDCDDNTDPKT-GNADCGVFGGWPYLAFQYIKRVGGI 348

Query: 234 MREEDYPYT---GTDRG-------------------------HACKF--DKSKI--AASV 261
            +EEDYPY    G ++G                          +C F  DKSK      V
Sbjct: 349 EKEEDYPYCSGLGGEKGTCFPCPAPAYNTSMCGPAVSYCNETESCGFRLDKSKFIPGLQV 408

Query: 262 ANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYIC-SRRLDHGVLLVGYG 320
            +++ +  +E  IA  L+K GPL+VA+NAV +Q Y  GV  P+ C  + LDH VLL G+G
Sbjct: 409 TDWAAIDTNETTIAVQLMKIGPLSVALNAVLLQFYHRGVFEPHFCDPKSLDHAVLLTGWG 468

Query: 321 SAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
                 I  ++KPYWI+KNSWG+ WG +GY+ I RG   CG+++ V+T
Sbjct: 469 VE--KTIFGEKKPYWIVKNSWGKKWGMDGYFYIKRGVGQCGINTQVAT 514



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 33/137 (24%)

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT---GTDRG------------------ 247
           G+ D G  GG    AF+Y  + GG+ +EEDYPY    G ++G                  
Sbjct: 20  GNADCGVFGGWPYLAFQYIKRVGGIEKEEDYPYCSGLGGEKGTCFPCPAPAYNASMCGPA 79

Query: 248 -------HACKF--DKSKI--AASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTY 296
                   +C F  DKSK      V +++ +  +E  IA  L+K GPL+VA+NAV +Q Y
Sbjct: 80  VSYCNETESCGFRLDKSKFIPGLQVTDWAAIDTNETTIAVQLMKIGPLSVALNAVLLQFY 139

Query: 297 IGGVSCPYIC-SRRLDH 312
             GV  P+ C  + LDH
Sbjct: 140 HRGVFEPHFCDPKSLDH 156


>gi|146215990|gb|ABQ10197.1| actinidin Act4a [Actinidia eriantha]
          Length = 385

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/314 (36%), Positives = 183/314 (58%), Gaps = 24/314 (7%)

Query: 46  HESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHG 104
            + TN++++     F  +  ++ K+Y +  E + RF IFK NLR    H   ++ S   G
Sbjct: 37  EQRTNDEVIAM---FESWLVEYGKSYNALGEKERRFEIFKDNLRFVDEHNADVNRSYKVG 93

Query: 105 ITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGS 164
           + QFSDLT AE+   YLG +  +R+   +D+      + LP   DWR+KGAV  VK+QG+
Sbjct: 94  LNQFSDLTDAEYSSIYLGTKFNIRMTNVSDRYEPRVGDQLPDSVDWRKKGAVLGVKNQGN 153

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCW+F++  A+EG N + TG L+SLSEQ++VDC  +         ++GCNGG ++ A+
Sbjct: 154 CGSCWTFASIAAVEGINKIVTGNLISLSEQEIVDCQRKYP-------NNGCNGGTLSGAY 206

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 284
           ++ +  GG+  E +YPYTG D G   +  K+K   ++  +  V  + ++     V   P+
Sbjct: 207 QFIINNGGINTEANYPYTGRD-GVCDQNKKNKKYVTIDRYENVPSNNEKALQKAVAFQPV 265

Query: 285 AVAI--NAVYMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           +V I  N+   ++Y  G+ + P  C  R+DHGV +VGYG+ G        K YWI++NSW
Sbjct: 266 SVVIASNSTAFKSYKSGIFNGP--CGPRIDHGVTIVGYGTEG-------GKDYWIVRNSW 316

Query: 342 GESWGENGYYKICR 355
           G +WGE+GY ++ R
Sbjct: 317 GPNWGESGYVRMQR 330


>gi|84660246|emb|CAI43320.1| cathepsin L [Lubomirskia baicalensis]
 gi|85677150|emb|CAI46307.1| cathepsin L [Lubomirskia baicalensis]
          Length = 327

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/314 (39%), Positives = 168/314 (53%), Gaps = 26/314 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA--THGITQFSDLTPAEFRRTY 120
           +KK+  K Y S  E   R  I++AN +    H         T G+ QF+DL  +EF R Y
Sbjct: 25  WKKEHGKVYNSDREELTRHIIWQANRKYVDEHNAHAEKFGFTVGMNQFADLESSEFGRLY 84

Query: 121 LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
            G   K  + K   +       DLP   DWR KG V  +K+QG CGSCW+FS    LEG 
Sbjct: 85  NGYNNKPSMKKAQSKVFSTKVGDLPTSVDWRTKGFVTAIKNQGQCGSCWAFSAVAGLEGQ 144

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           +F ATG LVSLSEQ LVDC            + GCNGGLM++AF+Y +K GG+  E  YP
Sbjct: 145 HFNATGTLVSLSEQNLVDCS-------TAEGNQGCNGGLMDNAFQYVIKNGGIDTEASYP 197

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVV--SLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           Y   D+   CKF+ + + ++ + FS +     E  +   +   GP++VAI+A +   Q Y
Sbjct: 198 YKAVDQ--KCKFNAANVGSTCSGFSDILPHKSEAALQVAVAVVGPISVAIDASHTSFQLY 255

Query: 297 IGGVSCPYICSR-RLDHGVLLVGY-GSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
             GV     CS+  LDHGV  VGY  S+G A        YWI+KNSWG +WG+ GY  + 
Sbjct: 256 KSGVYSESACSQTSLDHGVTAVGYDSSSGVA--------YWIVKNSWGTTWGQAGYIWMS 307

Query: 355 RGR-NVCGVDSMVS 367
           R + N CG+ +  S
Sbjct: 308 RNKNNQCGIATAAS 321


>gi|401397136|ref|XP_003879989.1| cathepsin L, related [Neospora caninum Liverpool]
 gi|325114397|emb|CBZ49954.1| cathepsin L, related [Neospora caninum Liverpool]
          Length = 415

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 172/315 (54%), Gaps = 26/315 (8%)

Query: 46  HESTNNDLLGAEHHFS----LFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           H++  N     E HF      F+  + K+YA++EE   R+ IFK NL     H +   S 
Sbjct: 101 HKTPVNIWEWKEEHFQNAFGSFRATYGKSYATEEETQKRYAIFKNNLAYIHTHNQQGYSY 160

Query: 102 THGITQFSDLTPAEFRRTYLGLRRKLRLPKD----ADQAPILPTNDLPADFDWREKGAVG 157
           +  +  F DL+  EFRR YLG  +   L  +    A +   +  +D+P+  DWREKG V 
Sbjct: 161 SLKMNHFGDLSREEFRRKYLGYNKSRNLKSNNLGVATELLKVSPSDVPSAVDWREKGCVT 220

Query: 158 PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNG 217
           PVKDQ  CGSCW+FS TGALEGA+   TG+L+SLSEQ+LVDC            + GC+G
Sbjct: 221 PVKDQRDCGSCWAFSATGALEGAHCAKTGELLSLSEQELVDCS-------LAEGNQGCSG 273

Query: 218 GLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAN 277
           G MN AF+Y + +GGL  EE YPY   D    CK    K+  +++ F  V    +     
Sbjct: 274 GEMNDAFQYVVDSGGLCSEEGYPYLARD--GECKRACKKV-VTISGFKDVPRKSETAMKA 330

Query: 278 LVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYW 335
            + + P+++AI A  +  Q Y  GV     C   LDHGVLLVGYG+      +  +K +W
Sbjct: 331 ALAHSPVSIAIEADQLPFQFYHEGV-FDASCGTDLDHGVLLVGYGTD-----KETKKDFW 384

Query: 336 IIKNSWGESWGENGY 350
           I+KNSWG  WG +GY
Sbjct: 385 IMKNSWGSGWGRDGY 399


>gi|9631045|ref|NP_047715.1| cathepsin-like proteinase [Lymantria dispar MNPV]
 gi|13124028|sp|Q9YMP9.1|CATV_NPVLD RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|3822313|gb|AAC70264.1| cathepsin-like proteinase [Lymantria dispar MNPV]
          Length = 356

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/330 (36%), Positives = 183/330 (55%), Gaps = 30/330 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRR--AARHQKLD-PSATHGITQF 108
           +L  A  +F  F + +NK Y S  E + R++IFK NL    A      D P+AT+ I +F
Sbjct: 48  NLQRAPDYFESFVENYNKNYTSDWEKNKRYSIFKDNLHEINAKNGNATDGPTATYKINKF 107

Query: 109 SDLTPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGS 167
           SDL+ +E    + GL    R+        +  P +  P  FDWRE+  V  +K+QG+CG+
Sbjct: 108 SDLSKSELIAKFTGLSIPERVSNFCKTIILNQPPDKGPLHFDWREQNKVTSIKNQGACGA 167

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CW+F+T  ++E    +   +L+ LSEQQL+DCD         S D GCNGGL+++AFE  
Sbjct: 168 CWAFATLASVESQFAMRHNRLIDLSEQQLIDCD---------SVDMGCNGGLLHTAFEEI 218

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFDKSK--IAASVANFSVVSLDEDQIAANLVKNGPLA 285
           ++ GG+  E DYP+ G +R   C  D+ +  + + V  +  V ++E+++   L   GP+ 
Sbjct: 219 MRMGGVQTELDYPFVGRNR--RCGLDRHRPYVVSLVGCYRYVMVNEEKLKDLLRAVGPIP 276

Query: 286 VAINAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           +AI+A  +  Y  GV  SC    +  L+H VLLVGYG            PYW+ KN+WG+
Sbjct: 277 MAIDAADIVNYYRGVISSCE---NNGLNHAVLLVGYGVENGV-------PYWVFKNTWGD 326

Query: 344 SWGENGYYKICRGRNVCG-VDSMVSTVAAA 372
            WGENGY+++ +  N CG V+ + ST   A
Sbjct: 327 DWGENGYFRVRQNVNACGMVNDLASTAVLA 356


>gi|1581745|prf||2117247A Cys protease:ISOTYPE=1
          Length = 467

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/310 (39%), Positives = 166/310 (53%), Gaps = 23/310 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK++  K Y S  E   R  +FK NL  A  H   +P A+  +T FSDLT  EFR 
Sbjct: 37  QFAAFKQRHGKVYGSAAEEAFRLGVFKENLLFARLHAAANPHASFAVTPFSDLTREEFRS 96

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLP---ADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
            Y          +   + P+    ++    A  DWR +GAV  +KDQG+C SCW+FST G
Sbjct: 97  RYHNAAAHFAAAQKRVRVPVEVEVEVGGPPAAVDWRARGAVTAIKDQGNCSSCWAFSTIG 156

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA--GGL 233
            +EG   LA   L  LSEQ LV CD+          D+GC+GGLM+SAF++ ++   G +
Sbjct: 157 NIEGQWHLAGNPLTGLSEQMLVSCDNA---------DNGCDGGLMDSAFDWIVEQNNGSV 207

Query: 234 MREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E  Y Y +G      C      + A ++    +  DED++AA L  NGPLA+A++A  
Sbjct: 208 YTEASYSYVSGGGDSQTCDMSDHVVGAVISGHVDLPQDEDKMAAWLAVNGPLAIAVDATS 267

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
             +Y GGV    + S +LDHGV+LVGY  +          PYWIIKNSWG  WGE GY +
Sbjct: 268 FMSYTGGVLTNCV-SDQLDHGVVLVGYNDS-------SNPPYWIIKNSWGADWGEEGYIR 319

Query: 353 ICRGRNVCGV 362
           I +G N C V
Sbjct: 320 IQKGTNQCLV 329


>gi|166235890|ref|NP_031827.2| pro-cathepsin H preproprotein [Mus musculus]
 gi|341940309|sp|P49935.2|CATH_MOUSE RecName: Full=Pro-cathepsin H; AltName: Full=Cathepsin B3; AltName:
           Full=Cathepsin BA; Contains: RecName: Full=Cathepsin H
           mini chain; Contains: RecName: Full=Cathepsin H;
           Contains: RecName: Full=Cathepsin H heavy chain;
           Contains: RecName: Full=Cathepsin H light chain; Flags:
           Precursor
 gi|74151776|dbj|BAE29677.1| unnamed protein product [Mus musculus]
 gi|74181999|dbj|BAE34071.1| unnamed protein product [Mus musculus]
 gi|74211659|dbj|BAE29188.1| unnamed protein product [Mus musculus]
 gi|74213518|dbj|BAE35569.1| unnamed protein product [Mus musculus]
 gi|148688954|gb|EDL20901.1| cathepsin H, isoform CRA_b [Mus musculus]
          Length = 333

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 173/318 (54%), Gaps = 31/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  + K+  K Y+S  E++HR  +F  N R+   H + + +    + QFSD++ AE + 
Sbjct: 32  HFKSWMKQHQKTYSS-VEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKH 90

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTT 174
            +L        P++        +  T   P+  DWR+KG  V PVK+QG+CGSCW+FSTT
Sbjct: 91  KFLWSE-----PQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACGSCWTFSTT 145

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +A+GK++SL+EQQLVDC    +       + GC GGL + AFEY L   G+M
Sbjct: 146 GALESAVAIASGKMLSLAEQQLVDCAQAFN-------NHGCKGGLPSQAFEYILYNKGIM 198

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G D   +C+F+  K  A V N   ++L DE  +   +    P++ A      
Sbjct: 199 EEDSYPYIGKDS--SCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTED 256

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  GV     C +   +++H VL VGYG             YWI+KNSWG  WGENG
Sbjct: 257 FLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQN-------GLLYWIVKNSWGSQWGENG 309

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG+N+CG+ +  S
Sbjct: 310 YFLIERGKNMCGLAACAS 327


>gi|171702841|dbj|BAG16376.1| cysteine protease [Brassica rapa var. perviridis]
          Length = 333

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/294 (40%), Positives = 161/294 (54%), Gaps = 27/294 (9%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLRRK 126
           + YA   E ++R+ +FK N+ R  R   +    T    + QF+DLT  EFR  Y G +  
Sbjct: 41  RVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEFRSMYTGFKGN 100

Query: 127 LRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
             L             + ++ LP   DWR+KGAV P+KDQG CGSCW+FS   A+EG   
Sbjct: 101 SVLSSRTKPTSFRYQNVSSDALPVSVDWRKKGAVTPIKDQGLCGSCWAFSAVAAIEGVAQ 160

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
           +  GKL+SLSEQ+LVDCD         + D GC GGLM++AF YT+  GGL  E +YPY 
Sbjct: 161 IKKGKLISLSEQELVDCD---------TNDGGCMGGLMDTAFNYTITIGGLTSESNYPYK 211

Query: 243 GTDRGHACKFDKSK-IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGG 299
            T+    C F+K+K IA S+  F  V  ++++     V + P+++ I    +  Q Y  G
Sbjct: 212 STN--GTCNFNKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGDIGFQFYSSG 269

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           V     C+  LDHGV  VGYG +      LK   YWI+KNSWG  WGE GY +I
Sbjct: 270 VFSGE-CTTHLDHGVTAVGYGRSKNG---LK---YWILKNSWGPKWGERGYMRI 316


>gi|23110964|ref|NP_001326.2| cathepsin W preproprotein [Homo sapiens]
 gi|29476894|gb|AAH48255.1| Cathepsin W [Homo sapiens]
 gi|119594870|gb|EAW74464.1| cathepsin W (lymphopain), isoform CRA_b [Homo sapiens]
          Length = 376

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/335 (37%), Positives = 171/335 (51%), Gaps = 42/335 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD-PSATHGITQFSDLTPAEFRR 118
           F LF+ +FN++Y S EEH HR  IF  NL +A R Q+ D  +A  G+T FSDLT  EF +
Sbjct: 42  FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 119 TYLGLRRKLRLPKDADQAPIL--------PTNDLPADFDWRE-KGAVGPVKDQGSCGSCW 169
            Y G RR       A   P +        P   +P   DWR+  GA+ P+KDQ +C  CW
Sbjct: 102 LY-GYRRA------AGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNCCW 154

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           + +  G +E    ++    V +S Q+L+DC         G C  GC+GG +  AF   L 
Sbjct: 155 AMAAAGNIETLWRISFWDFVDVSVQELLDC---------GRCGDGCHGGFVWDAFITVLN 205

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
             GL  E+DYP+ G  R H C   K +  A + +F ++  +E +IA  L   GP+ V IN
Sbjct: 206 NSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTIN 265

Query: 290 AVYMQTYIGGV--SCPYICSRRL-DHGVLLVGYG-------------SAGYAPIRLKEKP 333
              +Q Y  GV  + P  C  +L DH VLLVG+G             S+   P      P
Sbjct: 266 MKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTP 325

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           YWI+KNSWG  WGE GY+++ RG N CG+     T
Sbjct: 326 YWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360


>gi|355681656|gb|AER96815.1| Cathepsin L precursor [Mustela putorius furo]
          Length = 331

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 126/316 (39%), Positives = 170/316 (53%), Gaps = 23/316 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAE 115
           +S +K    K Y   EE   R  +++ NL+   +H +      H  T     F DLT  E
Sbjct: 29  WSQWKAAHGKLYDENEE-GWRRAVWEKNLKVIKQHNQEYSQGKHSFTMAMNAFGDLTNEE 87

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           F++   GL+ + R   +  QAP  P  + P+  DWR+KG V PVK+QG CGSCW+FS TG
Sbjct: 88  FKQVMNGLKSQKRKEGNVFQAP--PFAETPSSVDWRKKGYVTPVKNQGPCGSCWAFSATG 145

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           ALEG  F  T +LVSLSEQ LVDC            + GC+GGLM+ AF+Y    GGL  
Sbjct: 146 ALEGQMFRKTKRLVSLSEQNLVDCSQ-------AEGNEGCSGGLMDYAFQYVKDNGGLDS 198

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--M 293
           EE YPY   D   +CK+   + AA+   F  +  +E+ +   +   GP++ AI+A     
Sbjct: 199 EESYPYRAQDE--SCKYKPEQSAANDTGFMDIHPEEESLKLAVATVGPISAAIDASLSTF 256

Query: 294 QTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y  G+   P   S  LDHG+L+VGYGS G    + K   YWI+KNSWG  WG  GY  
Sbjct: 257 QFYHKGIYYDPDCSSENLDHGILVVGYGSQGEDSEKQK---YWIVKNSWGTDWGTQGYIL 313

Query: 353 ICRGR-NVCGVDSMVS 367
           + + R N CG+ +  S
Sbjct: 314 MAKDRDNHCGIATAAS 329


>gi|209732040|gb|ACI66889.1| Cathepsin H precursor [Salmo salar]
          Length = 330

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/316 (40%), Positives = 168/316 (53%), Gaps = 33/316 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E+HF  +  ++NK Y   EE+ HR  IF  + RR   H     + + G+ QFSD++ AEF
Sbjct: 27  EYHFKQWMLQYNKVY-DLEEYYHRLDIFTRHKRRIDYHNAGKHTFSMGLNQFSDMSFAEF 85

Query: 117 RRTYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFS 172
           R+T+L     L  P++        I      P   DWREKG  V PVK QG CGSCW+FS
Sbjct: 86  RKTFL-----LTEPQNCSATKGSHISSHGPYPGSVDWREKGNYVSPVKYQGHCGSCWTFS 140

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTG LE    +ATGKL  LSEQQLVDC  + +       + GC GGL + AFEY     G
Sbjct: 141 TTGCLESVTAIATGKLPLLSEQQLVDCAQDFN-------NHGCMGGLPSQAFEYVKYNNG 193

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAV 291
           LM E+DYPYTG D   +C F     AA V +  ++ S DE  +   + +  P++      
Sbjct: 194 LMTEDDYPYTGHDG--SCNFKPELAAAFVKDVVNITSYDEKGMVDAVARLNPVSFGYEVT 251

Query: 292 --YMQTYIGGVSCPYICSRRLD---HGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
             ++  Y  GV     C    D   H VL VGYG            PYWI+KNSWG +WG
Sbjct: 252 DDFLH-YKDGVYSSTTCKNTTDNVNHAVLAVGYGEK-------NSTPYWIVKNSWGTNWG 303

Query: 347 ENGYYKICRGRNVCGV 362
            +GY+ I RGRN+CG+
Sbjct: 304 MDGYFLIERGRNMCGL 319


>gi|5823020|gb|AAD53012.1|AF089849_1 senescence-specific cysteine protease [Brassica napus]
          Length = 344

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/294 (40%), Positives = 161/294 (54%), Gaps = 27/294 (9%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRRTYLGLRRK 126
           + YA   E ++R+ +FK N+ R  R   +    T    + QF+DLT  EFR  Y G +  
Sbjct: 47  RVYADANEKNNRYAVFKRNVERIERLNDVQSGLTFKLAVNQFADLTNEEFRSMYTGFKGN 106

Query: 127 LRLPKDADQAPI----LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
             L             + ++ LP   DWR+KGAV P+KDQG CGSCW+FS   A+EG   
Sbjct: 107 SVLSSRTKPTSFRYQNVSSDALPVSVDWRKKGAVTPIKDQGLCGSCWAFSAVAAIEGVAQ 166

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
           +  GKL+SLSEQ+LVDCD         + D GC GGLM++AF YT+  GGL  E +YPY 
Sbjct: 167 IKKGKLISLSEQELVDCD---------TNDGGCMGGLMDTAFNYTITIGGLTSESNYPYK 217

Query: 243 GTDRGHACKFDKSK-IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGG 299
            T+    C F+K+K IA S+  F  V  ++++     V + P+++ I    +  Q Y  G
Sbjct: 218 STN--GTCNFNKTKQIATSIKGFEDVPANDEKALMKAVAHHPVSIGIAGGDIGFQFYSSG 275

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           V     C+  LDHGV  VGYG +      LK   YWI+KNSWG  WGE GY +I
Sbjct: 276 VFSGE-CTTHLDHGVTAVGYGRSKNG---LK---YWILKNSWGPKWGERGYMRI 322


>gi|198432217|ref|XP_002130230.1| PREDICTED: similar to cathepsin L [Ciona intestinalis]
          Length = 327

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/315 (41%), Positives = 171/315 (54%), Gaps = 27/315 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRR 118
           +K    K+YAS EE   +  I++ NLR   +H        H     +T+F+DL   EF  
Sbjct: 26  WKNTHGKSYASHEELKRQL-IWEKNLRVVTQHNYEYDEGLHTYTMAMTKFADLENDEFAA 84

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            YL   RK          P+    + P   DWR +G V PVK+Q  CGSCW+FSTTG+LE
Sbjct: 85  MYLPRMRKDSRNGFCSAQPVGGFVENPTSIDWRTRGYVTPVKNQLQCGSCWAFSTTGSLE 144

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G +F  T  LVSLSEQQL+DC  +         D GC GG+M+ AF+Y   AGG+  E D
Sbjct: 145 GQHFAKTKNLVSLSEQQLMDCSFK-------EGDEGCGGGIMDYAFDYIFLAGGVESEAD 197

Query: 239 YPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAVYM--QT 295
           YPY    R   C+FD S IAA++     V S  E Q+   +   GP++VAI+A ++  Q 
Sbjct: 198 YPYEA--RNDHCRFDNSSIAATLTGCVDVTSGSETQLEKAVGSIGPVSVAIDASHISFQL 255

Query: 296 YIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE-NGYYKI 353
           Y  GV+   +CS   LDHGVL VGYG+            YWI+KNSWGE WG  NGY K+
Sbjct: 256 YGSGVNYEPMCSTTTLDHGVLAVGYGAD-------NGNEYWIVKNSWGEGWGHLNGYIKM 308

Query: 354 CRGR-NVCGVDSMVS 367
            + R N CG+ +  S
Sbjct: 309 SKNRNNNCGIATQAS 323


>gi|71084306|gb|AAZ23598.1| cysteine protease [Leishmania major]
          Length = 327

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 167/315 (53%), Gaps = 24/315 (7%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGIT-QFSD 110
           D   A  H+  FK++  K++    +  HRF  FK N++ A      +P A + ++ +F+D
Sbjct: 7   DNFIASAHYGRFKERHGKSFGEDADEGHRFNAFKQNMQTAYFLNTHNPHAHYDVSGKFAD 66

Query: 111 LTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPA--DFDWREKGAVGPVKDQGSCGSC 168
           LTP EF + YL      R  KD  +   +  + L      DWREK AV PVK+QG CGSC
Sbjct: 67  LTPQEFAKLYLNPDYYARRGKDYKEHVHVDDSVLSGAMSVDWREKVAVTPVKNQGMCGSC 126

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           W+FS  G +E    L    LVSLSEQ LV CD           D GCNGGLM+ A E+ +
Sbjct: 127 WAFSAIGNIESQWALKNHSLVSLSEQMLVSCD---------DIDDGCNGGLMDQAMEWII 177

Query: 229 K--AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
           +   G +  EE YPY           DK +  A ++ +  +  DE  IAA + K GP+AV
Sbjct: 178 QHHNGTVPTEESYPYASAGGTSPPCHDKGEFGARISGYMSLPHDEKAIAAYVEKKGPVAV 237

Query: 287 AINAVYMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           A++A   Q Y GGV    +C    L+HGVL+VG+        +  + PYWI+KNSWG SW
Sbjct: 238 AVDATTWQLYFGGVVT--LCFGWSLNHGVLVVGFN-------KRAKPPYWIVKNSWGTSW 288

Query: 346 GENGYYKICRGRNVC 360
           GE GY ++  G N C
Sbjct: 289 GEKGYIRLAMGSNQC 303


>gi|357166359|ref|XP_003580684.1| PREDICTED: oryzain alpha chain-like [Brachypodium distachyon]
          Length = 456

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/295 (40%), Positives = 165/295 (55%), Gaps = 26/295 (8%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRRTYLGLR 124
           + Y +  E + RF +F+ NLR   +H     +  H    G+ +F+DLT  E+R TYLG+R
Sbjct: 51  RTYNAIGEEERRFEVFRDNLRYVDQHNAAADAGLHSFRLGLNRFADLTNEEYRDTYLGVR 110

Query: 125 RK-LRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
            K +R  + + +       +LP   DWREKGAV  VKDQG CGSCW+FS   A+EG N +
Sbjct: 111 TKPVRERRLSGRYQAADNEELPESVDWREKGAVAKVKDQGGCGSCWAFSAIAAVEGINQI 170

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
            TG +++LSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG+  EEDYPY  
Sbjct: 171 VTGDMIALSEQELVDCDT--------SYNQGCNGGLMDYAFEFIINNGGIDSEEDYPY-- 220

Query: 244 TDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGV 300
            +R + C  +K      ++  +  V ++ +      V N P++VAI A     Q Y  G+
Sbjct: 221 KERDNRCDANKKNAKVVTIDGYEDVPVNSELSLKKAVANQPISVAIEAGGRAFQLYKSGI 280

Query: 301 SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
                C   LDHGV  VGYGS          K YWI+KNSWG  WGE+GY ++ R
Sbjct: 281 FTGR-CGTALDHGVTAVGYGSE-------NGKDYWIVKNSWGTVWGEDGYVRLER 327


>gi|157644745|gb|ABV59078.1| cathepsin L [Lates calcarifer]
          Length = 337

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/319 (41%), Positives = 174/319 (54%), Gaps = 22/319 (6%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H+ L+K   +K Y  +EE   R  +++ NL++   H        H    G+  F D+T  
Sbjct: 27  HWDLWKSWHSKKYHEKEE-GWRRMVWEKNLKKIELHNLEHSMGKHPYRLGMNHFGDMTHE 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           EFR+   G +++    K      + P   + P   DWR+KG V PVKDQG CGSCW+FST
Sbjct: 86  EFRQIMNGYKQRKTERKFKGSLFMEPNFLEAPRALDWRDKGYVTPVKDQGQCGSCWAFST 145

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TGALEG  F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y     GL
Sbjct: 146 TGALEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYVKDNQGL 198

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY 292
             E+ YPY GTD    C +D +  +A+   F  V S  E  +   +   GP++VAI+A +
Sbjct: 199 DSEDSYPYLGTD-DQPCHYDPNYNSANDTGFVDVPSGKERALMKAVAAVGPVSVAIDAGH 257

Query: 293 --MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y  G+     C S  LDHGVL+VGY   GY    +  K YWI+KNSW E WG+ G
Sbjct: 258 ESFQFYQSGIYYEKDCSSEELDHGVLVVGY---GYEGEDVDGKKYWIVKNSWSEKWGDKG 314

Query: 350 YYKICRGR-NVCGVDSMVS 367
           Y  + + R N CG+ +  S
Sbjct: 315 YIYMAKDRKNHCGIATAAS 333


>gi|260830531|ref|XP_002610214.1| hypothetical protein BRAFLDRAFT_216923 [Branchiostoma floridae]
 gi|229295578|gb|EEN66224.1| hypothetical protein BRAFLDRAFT_216923 [Branchiostoma floridae]
          Length = 274

 Score =  209 bits (533), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/297 (40%), Positives = 167/297 (56%), Gaps = 35/297 (11%)

Query: 80  RFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI 138
           R+ +F+ NL++A   Q  +  +A +G+T+F DLT  EFRR YL      + P        
Sbjct: 1   RYFVFQDNLKKAETLQDSERGTAKYGVTKFMDLTEEEFRRYYL--TPVWKAPAKPLPPAT 58

Query: 139 LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVD 198
           +P  D P  FDWR+ GAV  VKDQG CGSCW+FSTTG +EG   +  G L  LSEQ    
Sbjct: 59  IPKKDAPTAFDWRDHGAVTEVKDQGQCGSCWAFSTTGNIEGQWAIKKGNLPDLSEQHTSK 118

Query: 199 CDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA----GGLMREEDYPYTGTDRGHACKFDK 254
            +         SC        +N   + T ++     GL  E+ YPY   D    C  D 
Sbjct: 119 IE---------SCH-------INPIVKRTKRSIDGKSGLESEKAYPYEAKDE--QCHMDY 160

Query: 255 SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICS-RRLD 311
           SK+   + +   +S DE+ +A+ L +NGP+++ INA  MQ Y+GG+S P+   C+   LD
Sbjct: 161 SKVQVYINSSVNISKDENDMASWLAENGPISIGINAFPMQFYMGGISHPWRIFCNPEELD 220

Query: 312 HGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           HGVL+VGYG+         E PYWIIKNSWG++WGE GYY + RG  VCG+++M ++
Sbjct: 221 HGVLIVGYGTK-------DETPYWIIKNSWGKNWGEEGYYLVYRGGGVCGLNTMCTS 270


>gi|327358519|gb|AEA51106.1| cathepsin F, partial [Oryzias melastigma]
          Length = 255

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/268 (45%), Positives = 158/268 (58%), Gaps = 23/268 (8%)

Query: 106 TQFSDLTPAEFRRTYLG-LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGS 164
           T+FSDLT  EF   YL  L  +  L ++   AP   +    + +DWR+ GAV PVK+QG 
Sbjct: 4   TKFSDLTEEEFHSAYLNPLLSQWTLHREMKPAPPAKSPAPDS-WDWRDHGAVSPVKNQGM 62

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCW+FS TG +EG  FL  G L+SLSEQ+LVDCD           D  C GGL ++A+
Sbjct: 63  CGSCWAFSVTGNIEGQWFLKNGTLLSLSEQELVDCD---------GLDQACRGGLPSNAY 113

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 284
           E   K GGL  E DY YTG  +   C F   K+AA + +   +  DE +IAA L +NGP+
Sbjct: 114 EAIEKLGGLETETDYSYTG--KKQRCDFTNRKVAAYINSSVELPKDEKEIAAWLAENGPI 171

Query: 285 AVAINAVYMQTYIGGVSCPY--ICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           +VA+NA  MQ Y  GVS P+   C+   +DH VLLVGYG            P+W IKNSW
Sbjct: 172 SVALNAFAMQFYKKGVSHPWKIFCNPWMIDHAVLLVGYG-------ERNGIPFWAIKNSW 224

Query: 342 GESWGENGYYKICRGRNVCGVDSMVSTV 369
           GE +GE GYY + RG N CG++ M S+ 
Sbjct: 225 GEDYGEQGYYYLHRGSNACGINKMGSSA 252


>gi|15593255|gb|AAL02223.1|AF410883_1 cysteine protease CP19 precursor [Frankliniella occidentalis]
          Length = 334

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 165/321 (51%), Gaps = 29/321 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA----THGITQFSDLTPA 114
           H+  FK    K YA+  E  +R  +FK N  R A+H  L  S       G  Q++D+   
Sbjct: 27  HWESFKATHAKTYANAVEEAYRAKVFKENAIRIAKHNDLFASGEVTFKVGYNQYADMHTH 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSF 171
           E      G R  L   K A       +ND        DWR KGA  P+KDQG CGSCWSF
Sbjct: 87  EVTEKLNGYRSGL---KQASAFVHTASNDSWPWSKKVDWRSKGAATPIKDQGQCGSCWSF 143

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S TG+LEG  FL    LVSLSEQ LVDC  +   E       GCNGGLM+SAFEY    G
Sbjct: 144 SATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGNE-------GCNGGLMDSAFEYVKSNG 196

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINA 290
           G+  EE YPYT  D G +C +  +  A     +  V +  E  +   + K GP++VAI+A
Sbjct: 197 GIDTEESYPYTAVD-GDSCLYRAANNAGVNTGYKDVQAKSESALRDAVEKVGPVSVAIDA 255

Query: 291 V--YMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
                Q Y  G+     CS   LDHGVL VGYGS          K +WI+KNSWG SWGE
Sbjct: 256 SNWSFQMYSSGIYYESACSSDYLDHGVLAVGYGS------EWPNKEFWIVKNSWGTSWGE 309

Query: 348 NGYYKICRG-RNVCGVDSMVS 367
            GY K+ R  +N CG+ +  S
Sbjct: 310 EGYIKMARNKKNNCGIATEAS 330


>gi|167526493|ref|XP_001747580.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774026|gb|EDQ87660.1| predicted protein [Monosiga brevicollis MX1]
          Length = 330

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/293 (45%), Positives = 164/293 (55%), Gaps = 31/293 (10%)

Query: 81  FTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILP 140
           F    ANLR    H   + S T GITQF+DLT AEF          +  P++       P
Sbjct: 48  FRCHLANLRVIEAHNAGNSSFTMGITQFADLTAAEFSAYVKRFPMNVTRPRNEVWITEAP 107

Query: 141 TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCD 200
             ++    DWR+K AV  +K+QG CGSCWSFSTTG++EGA+ +ATGKLVSLSEQQL+DC 
Sbjct: 108 LQEV----DWRQKNAVTEIKNQGQCGSCWSFSTTGSVEGAHAIATGKLVSLSEQQLMDCS 163

Query: 201 HECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAAS 260
                      + GCNGGLM+ AFEY +  GGL  EEDYPYT  D G      + K AA 
Sbjct: 164 TRYG-------NHGCNGGLMDYAFEYVIANGGLDTEEDYPYTAED-GKCNTEKEKKHAAE 215

Query: 261 VANFSVVSLD-EDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLV 317
           +  F  V  + EDQ+AA  V  GP++VAI A     Q Y  GV     C   LDHGVL+V
Sbjct: 216 IHGFRNVPKEHEDQLAA-AVSIGPVSVAIEADQAGFQHYTSGVF-DGKCGTSLDHGVLVV 273

Query: 318 GYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG---RNVCGVDSMVS 367
           GY              YWI+KNSWG+SWGE GY ++ RG   + +CG+    S
Sbjct: 274 GYSD-----------DYWIVKNSWGKSWGEEGYIRLKRGVDKKGMCGITMQAS 315


>gi|394331824|gb|AFN27131.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/312 (41%), Positives = 168/312 (53%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
           ++E    LA  +L +LSEQQLV CD +         DSGC   LM  AFE+ L+   G +
Sbjct: 158 SIESQWALAGHRLTALSEQQLVSCDDK---------DSGCRARLMLQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGTDRGHACKFDKS---KIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S      A +  +  +   E  +AA L KNGP+++A++A
Sbjct: 209 FTEDSYPYVSST-GYVPECSNSIQLVPGARIDGYMTIESSETVMAAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y  GV  SC  +    L+HGVLLVGY   G       E PYW+IKNSWGE+WGEN
Sbjct: 268 SSFMSYQRGVVTSCAGM---PLNHGVLLVGYNRTG-------EVPYWVIKNSWGENWGEN 317

Query: 349 GYYKICRGRNVC 360
           GY ++  G N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|350538043|ref|NP_001234324.1| cysteine protease TDI-65 precursor [Solanum lycopersicum]
 gi|5726641|gb|AAD48496.1|AF172856_1 cysteine protease TDI-65 [Solanum lycopersicum]
 gi|2828252|emb|CAA05894.1| CYP1 [Solanum lycopersicum]
          Length = 466

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 198/365 (54%), Gaps = 47/365 (12%)

Query: 3   SKTVVLFLVSLVVFSAVSSGT---LIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH 59
           S T+ + ++ +++FS +SS +   +I   +  I + TD  DE+ + +ES           
Sbjct: 5   SSTLTISILLMLIFSTLSSASDMSIISYDETHIHRRTD--DEVSALYES----------- 51

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRR 118
              +  +  K+Y +  E D RF IFK NLR       + + S   G+T+F+DLT  E+R 
Sbjct: 52  ---WLIEHGKSYNALGEKDKRFQIFKDNLRYIDEQNSVPNQSYKLGLTKFADLTNEEYRS 108

Query: 119 TYLGL-----RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
            YLG      R+KL   K     P +  + LP   DWREKG +  VKDQGSCGSCW+FS 
Sbjct: 109 IYLGTKSSGDRKKLSKNKSDRYLPKV-GDSLPESIDWREKGVLVGVKDQGSCGSCWAFSA 167

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
             A+E  N + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+ +K GG+
Sbjct: 168 VAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVIKNGGI 219

Query: 234 MREEDYPYTGTDRGHAC-KFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA-- 290
             EEDYPY   +R   C ++ K+     + ++  V ++ ++     V + P+++A+ A  
Sbjct: 220 DTEEDYPY--KERNGVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIALEAGG 277

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
              Q Y  G+     C   +DHGV++ GYG+            YWI++NSWG +WGENGY
Sbjct: 278 RDFQHYKSGIFTGK-CGTAVDHGVVIAGYGTE-------NGMDYWIVRNSWGANWGENGY 329

Query: 351 YKICR 355
            ++ R
Sbjct: 330 LRVQR 334


>gi|148927382|gb|ABR19827.1| cysteine proteinase [Elaeis guineensis]
          Length = 470

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 170/311 (54%), Gaps = 32/311 (10%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH-----GITQFSDLTPAEFRRTY 120
           K  +AY +  E + RF IFK N+     H      A H     G+ +F+D+T  E+R  Y
Sbjct: 56  KHGRAYNALGEKERRFEIFKDNVLFIDAHNAA-ADAGHRSFRLGLNRFADMTNEEYRAVY 114

Query: 121 LGLR---RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           LG R    + R    +D+       DLP   DWR KGAV  VKDQGSCGSCW+FST  A+
Sbjct: 115 LGTRPAGHRRRARVGSDRYRYNAGEDLPESVDWRAKGAVAAVKDQGSCGSCWAFSTVAAV 174

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG N + TG L+SLSEQ+LVDCD+          + GCNGGLM+  FE+ +  GG+  EE
Sbjct: 175 EGINKIVTGDLISLSEQELVDCDN--------GYNQGCNGGLMDYGFEFIINNGGIDTEE 226

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQT 295
           DYPYT  D G   ++ K+    S+  +  V +++++     V N P++VAI A     Q 
Sbjct: 227 DYPYTARD-GKCDQYRKNAKVVSIDGYEDVPVNDEKALQKAVANQPVSVAIEAGGREFQL 285

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           Y  G+     C   LDHGV+ VGYG+          K YWI++NSWG  WGE+GY ++ R
Sbjct: 286 YHSGIFTGR-CGTDLDHGVVAVGYGTE-------NGKDYWIVRNSWGGDWGESGYIRMER 337

Query: 356 GRNV----CGV 362
             N     CG+
Sbjct: 338 NVNTSTGKCGI 348


>gi|13124026|sp|Q9WGE0.1|CATV_NPVHC RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|4884631|gb|AAD31760.1|AF120926_1 cysteine proteinase [Hyphantria cunea nucleopolyhedrovirus]
          Length = 324

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/312 (36%), Positives = 171/312 (54%), Gaps = 19/312 (6%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           DLL A  +F  F  KFNK Y+S+ E   RF IF+ NL       + D +A + I +FSDL
Sbjct: 20  DLLKAPSYFEDFLHKFNKHYSSESEKLRRFQIFQHNLEEIIIKNQNDTTAQYEINKFSDL 79

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           +  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+
Sbjct: 80  SKDETISKYTGLALPLQTQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGICGACWA 139

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           F+T  +LE    +   +L++LSEQQL+DCD+          D+GCNGGL+++A+E  ++ 
Sbjct: 140 FATLASLESQFAIKHNQLINLSEQQLIDCDY---------VDAGCNGGLLHTAYEAVMQM 190

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           GG+  E DYPY G+D G+        +      +  +++ E+++   L   GP+ VAI+A
Sbjct: 191 GGVQAENDYPYEGSD-GNCRVDVAKFVVKVKKCYRYIAVFEEKLKDLLRIVGPIPVAIDA 249

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
             +  Y  G+   Y  +   +H VLLVGYG            PYWI+KN+WGE WGE GY
Sbjct: 250 SDIVNYRRGIM-RYCSNYGFNHAVLLVGYGVEN-------NVPYWILKNTWGEDWGEQGY 301

Query: 351 YKICRGRNVCGV 362
           +++ +  N CG+
Sbjct: 302 FRVQQNINACGI 313


>gi|363807062|ref|NP_001242584.1| uncharacterized protein LOC100804015 precursor [Glycine max]
 gi|255640677|gb|ACU20623.1| unknown [Glycine max]
          Length = 366

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/369 (36%), Positives = 190/369 (51%), Gaps = 59/369 (15%)

Query: 1   MGSKTVV--LFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEH 58
           M S T++  L  +S  +  A+ + T+I+  D          +E+++ +E           
Sbjct: 1   MASMTMIYTLLFLSFTLSYAIKTSTIINYTD----------NEVMAMYEE---------- 40

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQK-LDPSATHGITQFSDLTPAEFR 117
               +  +  K Y    + D RF +FK NL     H   L+ +   G+ +F+D+T  E+R
Sbjct: 41  ----WLVRHQKGYNELGKKDKRFQVFKDNLGFIQEHNNNLNNTYKLGLNKFADMTNEEYR 96

Query: 118 RTYLGL-----RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             YLG      RR ++      +      + LP   DWR KGAV P+KDQGSCGSCW+FS
Sbjct: 97  AMYLGTKSNAKRRLMKTKSTGHRYAFSARDRLPVHVDWRMKGAVAPIKDQGSCGSCWAFS 156

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           T   +E  N + TGK VSLSEQ+LVDCD         + + GCNGGLM+ AFE+ ++ GG
Sbjct: 157 TVATVEAINKIVTGKFVSLSEQELVDCDR--------AYNEGCNGGLMDYAFEFIIQNGG 208

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF----SVVSLDEDQIAANLVKNGPLAVAI 288
           +  ++DYPY G D    C  D +K  A V N      V   DE+ +    V + P++VAI
Sbjct: 209 IDTDKDYPYRGFD--GIC--DPTKKNAKVVNIDGYEDVPPYDENAL-KKAVAHQPVSVAI 263

Query: 289 NAV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
            A    +Q Y  GV     C   LDHGV++VGYGS            YW+++NSWG  WG
Sbjct: 264 EASGRALQLYQSGVFTG-KCGTSLDHGVVVVGYGSENGV-------DYWLVRNSWGTGWG 315

Query: 347 ENGYYKICR 355
           E+GY+K+ R
Sbjct: 316 EDGYFKMQR 324


>gi|37651368|ref|NP_932731.1| cathepsin [Choristoneura fumiferana DEF MNPV]
 gi|82024252|sp|Q6VTL7.1|CATV_NPVCD RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|37499277|gb|AAQ91676.1| cathepsin [Choristoneura fumiferana DEF MNPV]
          Length = 324

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/322 (36%), Positives = 175/322 (54%), Gaps = 23/322 (7%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           DLL A  +F  F   FNK Y+S+ E  HRF IF+ NL         D SA + I +FSDL
Sbjct: 20  DLLKAPSYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDL 79

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           +  E    Y GL   L+  ++  +  +L  P +  P +FDWR    V  VK+QG+CG+CW
Sbjct: 80  SKDETISKYTGLSLPLQ-NQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACW 138

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +F+T G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E  + 
Sbjct: 139 AFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMN 189

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAI 288
            GG+  E DYPY   +    C+ + +K    V   +  V + E+++   L   GPL VAI
Sbjct: 190 MGGIQAENDYPYEANNGD--CRLNAAKFVVKVKKCYRYVLMFEEKLKDLLRIVGPLPVAI 247

Query: 289 NAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +A  +  Y  GV   Y  +  L+H VLLVGY             P+WI+KN+WG  WGE 
Sbjct: 248 DASDIVNYKRGV-IRYCANHGLNHAVLLVGYAVENGV-------PFWILKNTWGTDWGEQ 299

Query: 349 GYYKICRGRNVCGVDSMVSTVA 370
           GY+++ +  N CG+ + + + A
Sbjct: 300 GYFRVQQNINACGIQNELPSSA 321


>gi|402770507|gb|AFQ98388.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 166/320 (51%), Gaps = 28/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K Y S  E   RF IF  N     +  A++ K   S   G+ QF DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF R + G     R    +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFARIFNGYHGS-RKSGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTG+LEG +FL  G+LVSLSEQ LVDC            ++GC GGLM  AF+Y     G
Sbjct: 145 TTGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLD-EDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C+F K  + A+   +  +    ED +   +   GP++VAI+A 
Sbjct: 198 IDTEKSYPYEAVDG--ECRFKKEDVGATDTGYVEIKAGCEDDLKKAVATVGPISVAIDAS 255

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV   P   S  LDHGVL+VGYG  G        K YW++KNSW ESWG+ 
Sbjct: 256 HSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQ 308

Query: 349 GYYKICR-GRNVCGVDSMVS 367
           GY  + R   N CG+ S  S
Sbjct: 309 GYILMSRDNNNQCGIASQAS 328


>gi|1834307|dbj|BAA09820.1| cysteine proteinase [Spirometra erinaceieuropaei]
 gi|1834309|dbj|BAA09821.1| cysteine proteinase [Spirometra erinaceieuropaei]
          Length = 336

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/334 (41%), Positives = 182/334 (54%), Gaps = 35/334 (10%)

Query: 48  STNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH-----QKLDPSAT 102
           ST ++       +  +K  F K Y S EE  HR   F  NL    RH     Q+L+  A 
Sbjct: 20  STESETYVRRELWKAWKLAFKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAV 79

Query: 103 HGITQFSDLTPAEFRRTYLGLR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGP 158
             +  FSDLTP EF   YL LR     KLR  K+A   P+    +LP   +WRE+GAV  
Sbjct: 80  R-LNDFSDLTPGEFAERYLCLRGIVLTKLR-RKEAVSVPL--KENLPDSVNWRERGAVTS 135

Query: 159 VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGG 218
           VK+QG CGSCWSFS  GA+EGA  + TG L SLSEQQL+DC  +         + GCNGG
Sbjct: 136 VKNQGQCGSCWSFSANGAIEGAIQIKTGALRSLSEQQLMDCSWDYG-------NQGCNGG 188

Query: 219 LMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAAN 277
           LM  AF+Y  +  G+  E DY Y  T+R   C++ +  + A+V  ++ +   DE  +   
Sbjct: 189 LMPQAFQYAQRY-GVEAEVDYRY--TERDGVCRYRQDLVVANVTGYAELPEGDEGGLQRA 245

Query: 278 LVKNGPLAVAINAV--YMQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPY 334
           +   GP++V I+A      +Y  GV     CS   +DHGVL+VGYG+            Y
Sbjct: 246 VATIGPISVGIDAADPGFMSYSHGVFVSKTCSPYAIDHGVLVVGYGAE-------NGDAY 298

Query: 335 WIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           W++KNSWG SWGE+GY K+ R R N+CG+ SM S
Sbjct: 299 WLVKNSWGSSWGEDGYLKMARNRNNMCGIASMAS 332


>gi|242044818|ref|XP_002460280.1| hypothetical protein SORBIDRAFT_02g025920 [Sorghum bicolor]
 gi|241923657|gb|EER96801.1| hypothetical protein SORBIDRAFT_02g025920 [Sorghum bicolor]
          Length = 363

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/346 (39%), Positives = 175/346 (50%), Gaps = 31/346 (8%)

Query: 32  IRQVTDGGDEILSHHESTNNDLLGAEH---HFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           IR VTD     L   EST    LG       F+ F  ++ K+Y S  E   RF IF  +L
Sbjct: 34  IRSVTDRAASAL---ESTVFGALGRTRDALRFARFAVRYGKSYESAAEVQKRFRIFSESL 90

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
           +      +   S   GI +FSD++  EFR T LG  +        +         LP   
Sbjct: 91  QLVRSTNRKGLSYRLGINRFSDMSWEEFRATRLGAAQNCSATLAGNHRMRAAAVALPKTK 150

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWRE G V PVK+QG CGSCW+FSTTGALE A   ATGK +SLSEQQLVDC    +    
Sbjct: 151 DWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGKPFN---- 206

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFS 265
              + GCNGGL + AFEY    GGL  EE YPY G +    C F    +   V    N +
Sbjct: 207 ---NFGCNGGLPSQAFEYIKYNGGLDTEESYPYKGVN--GICDFKAENVGVKVLDSVNIT 261

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLLVGYGS 321
           + + DE + A  LV+  P++VA   V   + Y  GV     C      ++H VL VGYG 
Sbjct: 262 LGAEDELKDAVALVR--PVSVAFQVVNGFRQYKSGVYTSDSCGNTPMDVNHAVLAVGYGV 319

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
                      PYW+IKNSWG  WG+ GY+K+  G+N+CGV +  S
Sbjct: 320 ENGV-------PYWLIKNSWGADWGDKGYFKMEMGKNMCGVATCAS 358


>gi|15128493|dbj|BAB62718.1| plerocercoid growth factor/cysteine protease [Spirometra
           erinaceieuropaei]
 gi|15130639|dbj|BAB62799.1| plerocercoid growth factor-2/cysteine protease [Spirometra
           erinaceieuropaei]
          Length = 336

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 137/334 (41%), Positives = 182/334 (54%), Gaps = 35/334 (10%)

Query: 48  STNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH-----QKLDPSAT 102
           ST ++       +  +K  F K Y S EE  HR   F  NL    RH     Q+L+  A 
Sbjct: 20  STGSETYVRRELWKAWKLAFKKEYFSSEEELHRKRAFFNNLDFIIRHNQRYYQQLESYAV 79

Query: 103 HGITQFSDLTPAEFRRTYLGLR----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGP 158
             +  FSDLTP EF   YL LR     KLR  K+A   P+    +LP   +WRE+GAV  
Sbjct: 80  R-LNDFSDLTPGEFAERYLCLRGIVLTKLR-RKEAVSVPL--KENLPDSVNWRERGAVTS 135

Query: 159 VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGG 218
           VK+QG CGSCWSFS  GA+EGA  + TG L SLSEQQL+DC  +         + GCNGG
Sbjct: 136 VKNQGQCGSCWSFSANGAIEGAIQIKTGALRSLSEQQLMDCSWDYG-------NQGCNGG 188

Query: 219 LMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAAN 277
           LM  AF+Y  +  G+  E DY Y  T+R   C++ +  + A+V  ++ +   DE  +   
Sbjct: 189 LMPQAFQYAQRY-GVEAEVDYRY--TERDGVCRYRQDLVVANVTGYAELPEGDEGGLQRA 245

Query: 278 LVKNGPLAVAINAV--YMQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPY 334
           +   GP++V I+A      +Y  GV     CS   +DHGVL+VGYG+          + Y
Sbjct: 246 VATIGPISVGIDAADPGFMSYSHGVFVSKTCSPYAIDHGVLVVGYGAE-------NGEAY 298

Query: 335 WIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           W++KNSWG SWGE GY K+ R R N+CG+ SM S
Sbjct: 299 WLVKNSWGSSWGEGGYVKMARNRNNMCGIASMAS 332


>gi|443724292|gb|ELU12369.1| hypothetical protein CAPTEDRAFT_165495 [Capitella teleta]
          Length = 351

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 174/320 (54%), Gaps = 34/320 (10%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLTPAEFRR 118
           FK    + Y   EE   R  +F+ NL++   H  L      S   GI QF+D+   EF  
Sbjct: 47  FKTVHERNYGETEEM-QRKEVFRNNLKKIEMHNYLHSQGKSSYRMGINQFADMEVKEFAS 105

Query: 119 TYLGLRRKLRLPKDADQ------APILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
              G R   R  K  D       +P +P + LPA+ DWR++G V P+KDQG CGSCWSFS
Sbjct: 106 VVNGFRMNNRT-KVRDHLHSHYISPAIPVS-LPAEVDWRKEGYVTPIKDQGHCGSCWSFS 163

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGALEG +F  TGKLVSLSEQ L+DC            ++GCNGG+M+ AF+Y     G
Sbjct: 164 TTGALEGQHFRKTGKLVSLSEQNLIDC-------STSYGNNGCNGGVMDYAFQYIKDNDG 216

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAV 291
              E+ YPY   D    C+F K  + A+   ++ +   DE+++   +   GP++VAI+A 
Sbjct: 217 DDTEDSYPYEAADG--PCRFKKEYVGATDTGYTDLPKGDEEKMKEAVAMVGPVSVAIDAS 274

Query: 292 Y--MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV     C    LDHGVL+VGYG+          + YW++KNSWG  WG+ 
Sbjct: 275 HTSFQMYQSGVYDEVECDPEGLDHGVLVVGYGTE-------LGQDYWLVKNSWGTKWGDE 327

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY K+ R + N CG+ SM S
Sbjct: 328 GYIKMSRNKNNQCGISSMAS 347


>gi|6851030|emb|CAB71032.1| cysteine protease [Lolium multiflorum]
          Length = 359

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/346 (40%), Positives = 177/346 (51%), Gaps = 32/346 (9%)

Query: 32  IRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           IR VT+      S  EST    LG   H   F+ F  +  K+Y S  E   RF IF  +L
Sbjct: 30  IRPVTE---RAASAVESTVLGALGRTRHALRFARFAVRHGKSYGSAAEVQRRFRIFSESL 86

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
                  +   S   GI +FSD+T  EF+ T LG  +        +   +   N LP   
Sbjct: 87  DEVRSTNRKGLSYKLGINRFSDMTWEEFQATKLGAAQTCSATLAGNHL-MRDANALPETK 145

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWRE G V PVKDQ SCGSCW+FSTTGALE A   ATGK +SLSEQQLVDC    +    
Sbjct: 146 DWRETGIVSPVKDQASCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGAYN---- 201

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVA---NFS 265
              + GCNGGL + AFEY    GG+  EE YPY G +    CK+     A  VA   N +
Sbjct: 202 ---NFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVN--GVCKYRPENAAVQVADSVNIT 256

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAV-YMQTYIGGVSCPYICSRRLD---HGVLLVGYGS 321
           + + DE + A  LV+  P++VA   +   + Y  GV     C    D   H VL VGYG 
Sbjct: 257 LNAEDELKNAVGLVR--PVSVAFEVIDGFKQYKSGVYTSDHCGTTPDDVNHAVLAVGYGV 314

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
                      PYW+IKNSWG  WGE+GY+K+  G+N+C V +  S
Sbjct: 315 E-------NGVPYWLIKNSWGADWGEDGYFKMEMGKNMCAVATCAS 353


>gi|395819351|ref|XP_003783057.1| PREDICTED: cathepsin L1-like [Otolemur garnettii]
          Length = 333

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/317 (39%), Positives = 169/317 (53%), Gaps = 23/317 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPA 114
           H+  +K K  K Y  +EE   R  +++ N++    H +      HG T     F D+T  
Sbjct: 28  HWYRWKAKHRKLYGMREE-GWRRAVWEKNMKMIEVHNQEYSQGKHGFTMAMNAFGDMTNE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EFR+   G R +        Q P     ++P   DWREKG V PVK+QG CGSCW+FS T
Sbjct: 87  EFRQVMNGFRNQKHKKGKVFQEPSFL--EVPKSVDWREKGYVTPVKNQGQCGSCWAFSAT 144

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALEG  F  TGKL+SLSEQ LVDC     P+     + GC+GGLM+ AF+Y  + GGL 
Sbjct: 145 GALEGQMFRKTGKLISLSEQNLVDCSR---PQ----GNEGCDGGLMDYAFQYIKENGGLD 197

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY-- 292
            EE YPY   D   +CK+      A+   F  +  +E  +   +   GP++VAI+A +  
Sbjct: 198 SEESYPYDAMDE--SCKYRPEYSVANDTGFVDIPKEEKALMKAVATVGPISVAIDAGHES 255

Query: 293 MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Q Y  GV   P   S  +DHGVL+VGY   GY         +W++KNSWGE WG  GY 
Sbjct: 256 FQFYKEGVYFEPECSSDNVDHGVLVVGY---GYEETESDNNKFWLVKNSWGEEWGLGGYI 312

Query: 352 KICRG-RNVCGVDSMVS 367
           K+ +  +N CG+ +  S
Sbjct: 313 KMTKDQKNHCGIATAAS 329


>gi|426369199|ref|XP_004051582.1| PREDICTED: cathepsin W [Gorilla gorilla gorilla]
          Length = 376

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 172/335 (51%), Gaps = 42/335 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD-PSATHGITQFSDLTPAEFRR 118
           F LF+ +FN++Y S EEH HR  IF  NL +A R Q+ D  +A  G+T FSDLT  EF +
Sbjct: 42  FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 119 TYLGLRRKLRLPKDADQAPIL--------PTNDLPADFDWRE-KGAVGPVKDQGSCGSCW 169
            Y G RR       A   P +        P   +P   DWR+  GA+ P+KDQ +C  CW
Sbjct: 102 LY-GYRRA------AGGVPSMGREIRSEEPEESVPFTCDWRKVAGAISPIKDQKNCNCCW 154

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           + +  G +E    ++    V +S Q+L+DC         G C  GC+GG +  AF   L 
Sbjct: 155 AMAAAGNIETLWRISFWDFVDVSVQELLDC---------GRCGDGCHGGFVWDAFITVLN 205

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
             GL  E+DYP+ G  R H+C   K +  A + +F ++  +E +IA  L   GP+ V IN
Sbjct: 206 NSGLASEKDYPFQGKVRAHSCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTIN 265

Query: 290 AVYMQTYIGGV--SCPYICSRRL-DHGVLLVGYG-------------SAGYAPIRLKEKP 333
              ++ Y  GV  + P  C  +L DH VLLVG+G             S+   P      P
Sbjct: 266 MKPLRLYRKGVIKATPITCDPQLVDHSVLLVGFGSIKSEEGILAETVSSQSQPQPPHPTP 325

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           YWI+KNSWG  WGE GY+++ RG N CG+     T
Sbjct: 326 YWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360


>gi|157132324|ref|XP_001655999.1| cathepsin l [Aedes aegypti]
 gi|108881694|gb|EAT45919.1| AAEL002833-PA [Aedes aegypti]
          Length = 339

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/327 (40%), Positives = 180/327 (55%), Gaps = 31/327 (9%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH-QKLDPSATH---GITQFSDLT 112
           +  ++ FK +  K Y S+ E   R  I+  N  + A+H Q+ D         + +++DL 
Sbjct: 24  KEEWNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYADLL 83

Query: 113 PAEFRRTYLGLRR---KLRLPKDADQAP---ILPTN-DLPADFDWREKGAVGPVKDQGSC 165
             EF +T  G  R   K  L     + P   I P N ++P   DWR+KGAV PVKDQG C
Sbjct: 84  HEEFVQTVNGFNRTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPVKDQGHC 143

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           GSCWSFS TGALEG +F  TGKLVSLSEQ LVDC  +         ++GCNGG+M+ AF+
Sbjct: 144 GSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYG-------NNGCNGGMMDYAFQ 196

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPL 284
           Y    GG+  E+ YPY   D    C F+   + A+   +  +   DE+ +   L   GP+
Sbjct: 197 YIKDNGGIDTEKSYPYEAID--DTCHFNPKAVGATDKGYVDIPQGDEEALKKALATVGPV 254

Query: 285 AVAINAVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           ++AI+A +   Q Y  GV     C S  LDHGVL VGYG++       + + YW++KNSW
Sbjct: 255 SIAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSE------EGEDYWLVKNSW 308

Query: 342 GESWGENGYYKICRGR-NVCGVDSMVS 367
           G +WG+ GY K+ R R N CGV +  S
Sbjct: 309 GTTWGDQGYVKMARNRDNHCGVATCAS 335


>gi|96979798|ref|YP_611001.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|37077647|sp|Q91CL9.1|CATV_NPVAP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|16041073|dbj|BAB69773.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|94983331|gb|ABF50271.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
 gi|146229694|gb|ABQ12259.1| cathepsin [Antheraea pernyi nucleopolyhedrovirus]
          Length = 324

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/322 (36%), Positives = 177/322 (54%), Gaps = 23/322 (7%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           DLL A  +F  F  KFNK Y+S+ E   RF IF+ NL       + D SA + I +FSDL
Sbjct: 20  DLLKAPSYFEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDL 79

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           +  E    Y GL   L+  ++  +  +L  P +  P +FDWR    V  VK+QG CG+CW
Sbjct: 80  SKDETISKYTGLSLPLQ-KQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACW 138

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +F+T G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E  + 
Sbjct: 139 AFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDVGCDGGLLHTAYEAVMN 189

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAI 288
            GG+  E DYPY   +    C+ + +K    V   +  V+L E+++   L   GP+ VAI
Sbjct: 190 MGGIQAENDYPYEANN--GPCRVNAAKFVVRVKKCYRYVTLFEEKLKDLLRIVGPIPVAI 247

Query: 289 NAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +A  +  Y  G+   Y  +  L+H VLLVGYG            P+WI+KN+WG  WGE 
Sbjct: 248 DASDIVGYKRGI-IRYCENHGLNHAVLLVGYGVENGI-------PFWILKNTWGADWGEQ 299

Query: 349 GYYKICRGRNVCGVDSMVSTVA 370
           GY+++ +  N CG+ + + + A
Sbjct: 300 GYFRVQQNINACGIKNELPSSA 321


>gi|66810271|ref|XP_638859.1| cysteine proteinase 3 [Dictyostelium discoideum AX4]
 gi|166201983|sp|Q23894.2|CYSP3_DICDI RecName: Full=Cysteine proteinase 3; AltName: Full=Cysteine
           proteinase II; Flags: Precursor
 gi|60467526|gb|EAL65548.1| cysteine proteinase 3 [Dictyostelium discoideum AX4]
          Length = 337

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/308 (40%), Positives = 166/308 (53%), Gaps = 24/308 (7%)

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
           NKAY + +E   R+  FK N+               G+ Q +DL+  E+R  YLG R  +
Sbjct: 42  NKAY-THKEFMPRYEEFKKNMDYVHNWNSKGSKTVLGLNQHADLSNEEYRLNYLGTRAHI 100

Query: 128 RL----PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
           +L     ++       P    P + DWREK AV PVKDQG CGSC+SFSTTG++EG   +
Sbjct: 101 KLNGYHKRNLGLRLNRPQFKQPLNVDWREKDAVTPVKDQGQCGSCYSFSTTGSVEGVTAI 160

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
            TGKLVSLSEQ ++DC      E       GCNGGLM +AFEY +K  GL  EE YPY  
Sbjct: 161 KTGKLVSLSEQNILDCSSSFGNE-------GCNGGLMTNAFEYIIKNNGLNSEEQYPYE- 212

Query: 244 TDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVS 301
                 CKF +  +AA + ++  +   ++    N +   P++VAI+A +   Q Y  GV 
Sbjct: 213 MKVNDECKFQEGSVAAKITSYKEIEAGDENDLQNALLLNPVSVAIDASHNSFQLYTAGVY 272

Query: 302 CPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NV 359
               CS   LDHGVL VG G+          + Y+I+KNSWG SWG NGY  + R + N 
Sbjct: 273 YEPACSSEDLDHGVLAVGMGTD-------NGEDYYIVKNSWGPSWGLNGYIHMARNKDNN 325

Query: 360 CGVDSMVS 367
           CG+ +M S
Sbjct: 326 CGISTMAS 333


>gi|332260024|ref|XP_003279085.1| PREDICTED: cathepsin L1 isoform 3 [Nomascus leucogenys]
 gi|441593306|ref|XP_004087072.1| PREDICTED: cathepsin L1 [Nomascus leucogenys]
 gi|441593309|ref|XP_004087073.1| PREDICTED: cathepsin L1 [Nomascus leucogenys]
          Length = 333

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 169/319 (52%), Gaps = 23/319 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLT 112
           E  ++ +K   N+ Y   EE   R  +++ N++   +H +      H  T     F D+T
Sbjct: 26  EAQWTKWKAMHNRLYGMNEEGWRR-AVWEKNMKMIEQHNQEYREGKHSFTMAMNAFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR+   G + +        Q P+    + P   DWREKG V PVK+QG CGSCW+FS
Sbjct: 85  SEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y    GG
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQ----GNEGCNGGLMDYAFQYVQDNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  EE YPY  T+   +CK++     A+   F  +   E  +   +   GP++VA++A +
Sbjct: 196 LDSEESYPYEATEE--SCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAVDAGH 253

Query: 293 --MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y  G+     CS   +DHGVL+VGY   G+         YW++KNSWGE WG  G
Sbjct: 254 QSFQFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNNKYWLVKNSWGEEWGMGG 310

Query: 350 YYKICRG-RNVCGVDSMVS 367
           Y K+ +  RN CG+ S  S
Sbjct: 311 YIKMAKDRRNHCGIASAAS 329


>gi|402770501|gb|AFQ98385.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 166/320 (51%), Gaps = 28/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K Y S  E   RF IF  N     +  A++ K   S   G+ QF DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF R + G     R    +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL  G+LVSLSEQ LVDC            ++GC GGLM  AF+Y     G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C+F K  + A+   +  + +  ED +   +   GP++VAI+A 
Sbjct: 198 IDTEKSYPYEAVDG--ECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDAS 255

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV   P   S  LDHGVL+VGYG  G        K YW++KNSW ESWG+ 
Sbjct: 256 HSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQ 308

Query: 349 GYYKICR-GRNVCGVDSMVS 367
           GY  + R   N CG+ S  S
Sbjct: 309 GYILMSRDNNNQCGIASQAS 328


>gi|42564161|gb|AAS20592.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 326

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 120/307 (39%), Positives = 174/307 (56%), Gaps = 22/307 (7%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRA----ARHQKLDPSATHGITQFSDLTPAEFRR 118
           FK+   K Y S  E   RF IF++NLR+     A++ K + S   G+T F+DLT  EF+ 
Sbjct: 26  FKQTHGKTYKSLLEERTRFGIFQSNLRKIEEHNAKYDKGEESYFLGVTPFADLTHDEFKD 85

Query: 119 TYLGLRRKLRLPKDADQA-PILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
               LRR+++   + +    + P   ++P   DW +KGAV  VK QG CGSCW+FS TGA
Sbjct: 86  K---LRRQIKTKPNVEATLAVFPEGLEVPDSIDWTQKGAVLDVKYQGGCGSCWAFSATGA 142

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LEG N +     + LSEQQL+DC       +P   D   +GGLM+ AF+Y L   G+  +
Sbjct: 143 LEGQNAIVNNVKIPLSEQQLLDC------SKPYGNDDCEHGGLMSFAFDYVLDK-GIEAD 195

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTY 296
             YPY G D    C++D  K    +  +  VS+ E+++   +   GP++VAI+A  +Q Y
Sbjct: 196 SSYPYKGIDT--PCQYDAKKTVLKIKGYRNVSISEEELKKAVGTVGPVSVAIDADPIQLY 253

Query: 297 IGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR- 355
            GG+     C+  L+HGVL VGYG   +      +K +W +KNSWG+ WGE GY++I R 
Sbjct: 254 SGGILDGLFCTHNLNHGVLAVGYGEEDHL---FGKKKFWKVKNSWGKDWGEQGYFRIKRD 310

Query: 356 GRNVCGV 362
             N+CG+
Sbjct: 311 ANNLCGI 317


>gi|288548564|gb|ADC52430.1| cathepsin L1 cysteine protease [Pinctada fucata]
          Length = 331

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/320 (38%), Positives = 175/320 (54%), Gaps = 26/320 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           +  ++++K  F K Y + EE   R  +++ N+    +H +      H    G  +++D+T
Sbjct: 25  DQEWAIYKDMFAKNYVADEERMRRL-VWEDNIDYIEKHNRRADRGEHKFWLGTNEYADMT 83

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EF+    G   +     D   +P     DLP   DWR+KG V PVK+QG CGSCWSFS
Sbjct: 84  IDEFKAIMNGFIMQNGTKGDTYMSPS-NIGDLPDKVDWRDKGYVTPVKNQGHCGSCWSFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +F +TGKLVSLSEQ L+DC  +         + GC GGLM+ AFEY  K  G
Sbjct: 143 ATGSLEGQHFKSTGKLVSLSEQNLIDCSKK-------EGNHGCKGGLMDFAFEYIQKNDG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAAS-VANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPYT  D G  C+F K+ + A+      +    E  +   +   GP++VA++A 
Sbjct: 196 IDTEQSYPYTAKD-GIECRFKKADVGATDKGKVDLPRQSEKALQEAVATVGPISVAMDAG 254

Query: 292 Y--MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  G+    +CS  +LDHGVL VGYGS G       E  YW++KNSWG +WG  
Sbjct: 255 HRSFQLYKRGIYTEPMCSSTKLDHGVLAVGYGSEG-------EGDYWLVKNSWGATWGME 307

Query: 349 GYYKICRG-RNVCGVDSMVS 367
           G++ + R  RN CG+ +  S
Sbjct: 308 GFFMLARNHRNECGIATQAS 327


>gi|402770503|gb|AFQ98386.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  209 bits (531), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 167/320 (52%), Gaps = 28/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K Y S  E   RF IF  N     +  A++ K   S   G+ QF DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF R + G     R    +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSTFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL  G+LVSLSEQ LVDC            ++GC GGLM  AF+Y  +  G
Sbjct: 145 ATGSLEGRHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKENDG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C+F K  + A+   +  + +  ED +   +   GP++VAI+A 
Sbjct: 198 IDTEKSYPYEAVDG--ECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDAS 255

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV   P   S  LDHGVL+VGYG  G        K YW++KNSW ESWG+ 
Sbjct: 256 HSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQ 308

Query: 349 GYYKICR-GRNVCGVDSMVS 367
           GY  + R   N CG+ S  S
Sbjct: 309 GYILMSRDNNNQCGIASQAS 328


>gi|530734|emb|CAA56914.1| cathepsin l [Nephrops norvegicus]
 gi|1582620|prf||2119193A cathepsin L-related Cys protease
          Length = 324

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 171/321 (53%), Gaps = 29/321 (9%)

Query: 53  LLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA----ARHQKLDPSATHGITQF 108
           L  A   +  FK KF + Y   EE  +R  +F  NL+       +++  + +    I QF
Sbjct: 13  LAAANPSWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYESGEVTYNLAINQF 72

Query: 109 SDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP--ADFDWREKGAVGPVKDQGSCG 166
           SDLT  EF     G +  LR PK    A    T+  P   + DWR KG V  VKDQG CG
Sbjct: 73  SDLTNDEFNSMMKGYKTSLR-PKPV--AVFTSTDAAPETTEVDWRTKGCVTHVKDQGQCG 129

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FS TG+LEG +FL  G+LVSL+EQQLVDC            + GCNGG +N AF+Y
Sbjct: 130 SCWAFSATGSLEGQHFLKYGELVSLAEQQLVDCAGGI------YYNQGCNGGWVNQAFKY 183

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLA 285
               GG+  E  YPY   D  + C+F+ + +AA+ + F S+    E          GP++
Sbjct: 184 IKANGGIDTESSYPYEARD--NTCRFNSNSVAATCSGFVSIAQGSESPEVRRTTNTGPIS 241

Query: 286 VAINAVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           VAI+A +   Q+Y  GV   P   S +LDH VL VGYGS G        + +W++KNSWG
Sbjct: 242 VAIDAAHRSFQSYSSGVYYEPSCSSSQLDHAVLAVGYGSEG-------GQDFWLVKNSWG 294

Query: 343 ESWGENGYYKICRGR-NVCGV 362
            SWG  GY  + R R N CG+
Sbjct: 295 TSWGSAGYINMARNRNNNCGI 315


>gi|354466410|ref|XP_003495667.1| PREDICTED: pro-cathepsin H-like [Cricetulus griseus]
          Length = 333

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 178/322 (55%), Gaps = 39/322 (12%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  +  +  K Y+S E +++R   F  N R+   H + + +   G+ QFSD+T AE +R
Sbjct: 32  HFKSWMTQHQKTYSSVE-YNYRLKTFANNWRKIHAHNQRNHTFKMGLNQFSDMTFAEIKR 90

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTT 174
            YL        P++        +  T  LP   DWR+KG  V  VK+QGSCGSCW+FSTT
Sbjct: 91  KYL-----WSEPQNCSATKGNYLRGTGPLPPSMDWRKKGNFVSAVKNQGSCGSCWTFSTT 145

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +A+GK++SL+EQQLVDC    +       + GC GGL + AFEY L   G+M
Sbjct: 146 GALESAVAIASGKMLSLAEQQLVDCAQNFN-------NHGCEGGLPSQAFEYILYNKGIM 198

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINA--- 290
            E+ YPY G D GH CKFD  K  A V + + ++L DE  +   +    P++ A      
Sbjct: 199 GEDTYPYRGKD-GH-CKFDPQKAIAFVKDVANITLNDEKAMVEAVALYNPVSFAFEVTDD 256

Query: 291 --VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEK---PYWIIKNSWGESW 345
             +Y +      SC +    +++H VL VGYG          EK   PYWI+KNSWG +W
Sbjct: 257 FMLYQKGIYSSTSC-HKTPDKVNHAVLAVGYG----------EKDGIPYWIVKNSWGTNW 305

Query: 346 GENGYYKICRGRNVCGVDSMVS 367
           G+ GY+ I RG+N+CG+ +  S
Sbjct: 306 GDKGYFLIERGKNMCGLAACAS 327


>gi|16304178|gb|AAL16954.1|AF426414_1 cathepsin L-like cysteine protease precursor [Delia radicum]
          Length = 337

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 178/322 (55%), Gaps = 29/322 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLTPAE 115
           +  FK +  K + S+ E   R  IF  N  + A+H +L      S   G+ ++SD+   E
Sbjct: 27  WQTFKMEHRKNFLSEVEERFRMKIFNENRHKIAKHNQLYAQGKVSFKLGLNKYSDMLYHE 86

Query: 116 FRRTYLG----LRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWS 170
           F+ T  G    +R+ LR    +    I P N  +P   DWR+ GAV  VKDQG CGSCW+
Sbjct: 87  FKETMNGYNHTMRKVLRAQGFSGIIYIPPANVQIPKSVDWRQHGAVTAVKDQGHCGSCWA 146

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FS+T ALEG +F   G LVSLSEQ LVDC  +         ++GCNGGLM++AF Y    
Sbjct: 147 FSSTAALEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDN 199

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
           GG+  E+ YPY G D   +C F KS + A+   F  +   DE+ +   +   GP++VAI+
Sbjct: 200 GGIDTEKSYPYEGIDD--SCHFTKSGVGATDTGFVDIPQGDEEALMKAVATMGPVSVAID 257

Query: 290 AVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  GV + P   ++ LDHGVL+VGYG+            YW++KNSWG +WG
Sbjct: 258 ASHESFQLYSEGVYNEPECDAQNLDHGVLVVGYGTDKTGL------DYWLVKNSWGTTWG 311

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + GY K+ R + N CG+ +  S
Sbjct: 312 DQGYIKMARNQDNQCGIATASS 333


>gi|110349475|gb|ABG73218.1| cathepsin L 2 precursor [Diaprepes abbreviatus]
          Length = 348

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/336 (38%), Positives = 174/336 (51%), Gaps = 41/336 (12%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD----PSATHGITQFSDLT 112
           +  +  FK +  K Y S+ E+++R ++F  NL +   H KL      S    +    DLT
Sbjct: 25  QEQWEQFKLEHGKVYESESENEYRQSVFMENLFQINEHNKLYEMGLSSYQMAMNHLGDLT 84

Query: 113 PAEFRRTYLGLRRKL-------------RLPKDADQ--APILPTN----DLPADFDWREK 153
             EF R Y     +L              LP+D        LPTN    DLP D DWR+K
Sbjct: 85  KDEFMRIYTVNMPQLPQSENLSDSEPWLDLPQDLQGFVTYALPTNLDEVDLPTDIDWRQK 144

Query: 154 GAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDS 213
           GAV PVK+Q +CGSCWSFS TGALE   F  T KL+SLSEQQLVDC            + 
Sbjct: 145 GAVTPVKNQRNCGSCWSFSATGALEAQWFKKTNKLISLSEQQLVDCSGRYG-------NH 197

Query: 214 GCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQ 273
           GC+GG M+ AF Y  + GG+  E+ YPYT  D    C +     AA+V+   +V   E+Q
Sbjct: 198 GCHGGWMHWAFGYIKENGGIDTEQSYPYTAKDG--RCAYKPGNKAATVSQVIMVPRGENQ 255

Query: 274 IAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEK 332
           +AA +   GP+++A    +  Q Y  GV     C   L+H +L VGYGS G        K
Sbjct: 256 LAAKVSSVGPISIAAEVSHKFQFYHSGVYDEPQCGHSLNHAMLAVGYGSMG-------GK 308

Query: 333 PYWIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
            +W++KNSWG  WG+ GY ++ + + N CG+  M S
Sbjct: 309 NFWLVKNSWGTGWGDQGYIRMAKDKNNQCGIALMAS 344


>gi|326493368|dbj|BAJ85145.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 436

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/322 (37%), Positives = 175/322 (54%), Gaps = 29/322 (9%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  ++      ++ +  +    Y +  E + RF  F+ NLR   +H     + 
Sbjct: 28  IVSYGERSEEEV---RRMYAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAG 84

Query: 102 TH----GITQFSDLTPAEFRRTYLGLRRKL-RLPKDADQAPILPTNDLPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLG R K  R  K + +      ++LP   DWR+KGAV
Sbjct: 85  VHSFRLGLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQAADNDELPESVDWRKKGAV 144

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
           G VKDQG CGSCW+FS   A+EG N + TG ++ LSEQ+LVDCD         S + GCN
Sbjct: 145 GAVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT--------SYNQGCN 196

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIA 275
           GGLM+ AFE+ +  GG+  EEDYPY   +R + C  +K      ++  +  V ++ ++  
Sbjct: 197 GGLMDYAFEFIINNGGIDSEEDYPY--KERDNRCDANKKNAKVVTIDGYEDVPVNSEKSL 254

Query: 276 ANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKP 333
              V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K 
Sbjct: 255 QKAVANQPISVAIEAGGRAFQLYKSGIFTG-TCGTALDHGVAAVGYGTE-------NGKD 306

Query: 334 YWIIKNSWGESWGENGYYKICR 355
           YW+++NSWG  WGE+GY ++ R
Sbjct: 307 YWLVRNSWGSVWGEDGYIRMER 328


>gi|444514070|gb|ELV10520.1| Cathepsin L1 [Tupaia chinensis]
          Length = 450

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/334 (40%), Positives = 172/334 (51%), Gaps = 33/334 (9%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I S   +++ +L  + HH+   K    + Y   EE   R  +++ N++    H     + 
Sbjct: 138 IASATPNSDQNLDTSWHHW---KSTHRRLYGKNEE-GWRRAVWEKNMKMIEMHNHEYSNG 193

Query: 102 THGITQ----FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVG 157
            HG T     F D+T  EFR+   G R + +       AP+L     P   DWREKG V 
Sbjct: 194 KHGFTMGMNAFGDMTNEEFRQVMNGFRNQKQKSGKVFHAPLLL--QAPKSVDWREKGFVT 251

Query: 158 PVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNG 217
           PVK+QG CGSCW+FS TGALEG  F  TGKL+SLSEQ LVDC            + GC G
Sbjct: 252 PVKNQGQCGSCWAFSATGALEGQMFRKTGKLISLSEQNLVDCSRR-------QGNLGCQG 304

Query: 218 GLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAAN 277
           GLM++AF+Y    GGL  EE YPY G D    C++      A+   F      E  +   
Sbjct: 305 GLMDNAFQYIKDNGGLDSEESYPYKGMD--GTCQYKAEWAVANDTGF------EKALMKA 356

Query: 278 LVKNGPLAVAINAVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
           +   GP++VAI+A +   Q Y  G+   P   S  LDHGVL+VGYG       R     Y
Sbjct: 357 VASVGPISVAIDAGHASFQFYKDGIYYEPDCSSENLDHGVLVVGYG----VEKRNSNDKY 412

Query: 335 WIIKNSWGESWGENGYYKICRGRNV-CGVDSMVS 367
           W+IKNSWGE WG NGY KI + RN  CGV S  S
Sbjct: 413 WLIKNSWGEQWGANGYVKIAKDRNNHCGVASAAS 446


>gi|358339355|dbj|GAA47435.1| cathepsin F [Clonorchis sinensis]
          Length = 1157

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/277 (41%), Positives = 161/277 (58%), Gaps = 22/277 (7%)

Query: 87  NLRRAARHQKLDP-SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP 145
           N+++A  +Q L+  +A +G+TQFSDLT  EF+ T+LGLR   +  K         +  +P
Sbjct: 654 NIKQAEFYQTLERGTALYGVTQFSDLTGEEFQETFLGLRLDEQYSKSQSYVKKKHSVSIP 713

Query: 146 ADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDP 205
            ++DWR  GAVGPV DQG CGSCW+FS  G +EG  F  TG+LVSLS+QQLVDCD     
Sbjct: 714 ENYDWRPYGAVGPVLDQGHCGSCWAFSVIGNIEGQWFRKTGQLVSLSKQQLVDCDRS--- 770

Query: 206 EEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS 265
                   GC GG   + ++   + GGL  E DY YTG D    C  +  K  A V +  
Sbjct: 771 ------SRGCGGGYPPATYDSIRRIGGLEIELDYRYTGRD--GVCHQNPRKFVAYVNSSV 822

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCP---YICSRRLDHGVLLVGYGSA 322
            ++ DE+ IA  L  +GP+++A+NA  +Q Y+ G+  P   Y   + + H VL VG+G+ 
Sbjct: 823 ALTKDENTIAEWLSYHGPISMALNARLLQFYVSGIMHPPAAYCPVKDISHAVLSVGFGTK 882

Query: 323 GYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV 359
           G         P+WI+KNSWG  WGE GY++I RG ++
Sbjct: 883 G-------NVPFWIVKNSWGTLWGEEGYFRIYRGDDM 912



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/261 (38%), Positives = 129/261 (49%), Gaps = 34/261 (13%)

Query: 115 EFRRTYLGL---RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
           EF+  YL      RKL   K  +   +    D    FDWR+ GAVGPV DQ  CG+ W+F
Sbjct: 434 EFKALYLTAMYDHRKLNQSKTTEPETVGEPQD---SFDWRDYGAVGPVLDQDRCGASWAF 490

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S  G +EG  F+   +L+SLSEQQLVDCD           D GC GG    AFE   + G
Sbjct: 491 SAIGNIEGQYFMRVHRLLSLSEQQLVDCDR---------IDQGCAGGTPYGAFEGIQQLG 541

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  E DYPY G      C+ +  +   S+     +  DEDQIA  L  +GPL+V IN  
Sbjct: 542 GLELEADYPYLGHQDN--CQSNPLRFVVSINGSVQLPKDEDQIAQYLFDHGPLSVGINGA 599

Query: 292 YMQTYIGGVSCPYI--CS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            +Q Y  G+  P    C+   ++H  L VG+G         ++ PYW IKNSWG  WGE 
Sbjct: 600 LLQYYSSGIMQPLWDNCNPAEMNHAGLAVGFGFE-------QDVPYWTIKNSWGMLWGEE 652

Query: 349 G-------YYKICRGRNVCGV 362
                   Y  + RG  + GV
Sbjct: 653 DNIKQAEFYQTLERGTALYGV 673



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/182 (46%), Positives = 102/182 (56%), Gaps = 12/182 (6%)

Query: 116  FRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
            F   YLG R   R P  A    +    ++P  FDWRE GAVGP++DQG CGSCW+FST G
Sbjct: 972  FYFLYLGARFD-REPSRAGSMVVDDLGEIPERFDWRELGAVGPIQDQGDCGSCWAFSTIG 1030

Query: 176  ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
             +EG  F  TG+L++LSEQQL+DCD         S D GC GG     +   +K GGL  
Sbjct: 1031 NIEGQWFKKTGQLLTLSEQQLIDCD---------SVDDGCGGGYPPDTYGDIVKMGGLEL 1081

Query: 236  EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
              DYPY   D    CK ++SK  A V    V+   EDQ A  L KNGPL+  INA Y+Q 
Sbjct: 1082 NADYPYIAAD--GVCKMERSKFRAYVNKSLVLPTKEDQQAVWLSKNGPLSAGINADYLQV 1139

Query: 296  YI 297
             I
Sbjct: 1140 VI 1141



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 115/242 (47%), Gaps = 43/242 (17%)

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EFRR YL  +      +  D+  +     LP+ FDWRE GAVGPV++QG CGSCW+ S  
Sbjct: 190 EFRRLYLTYKSPDE-HEPIDRIHVQEVGQLPSYFDWREYGAVGPVRNQGQCGSCWAISA- 247

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
                               ++VDCDH          D GC+GG    A+E   + GGL 
Sbjct: 248 --------------------EVVDCDH---------ADHGCSGGFPIHAYECVQRLGGLE 278

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQ 294
               YPY G  +   C+ D     A +     +  D +QIA  L   GPL+V ++A  +Q
Sbjct: 279 LAVRYPYVGYQQ--YCQADPRYFVAYINGSVALPKDSEQIAKFLATFGPLSVVLDARLLQ 336

Query: 295 TYIGGVSCP---YICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Y  G+  P   Y     L+H VL VG+G+        +  PYWIIKNSWGE WGE    
Sbjct: 337 YYRSGILNPSVAYCNPEELNHAVLSVGFGTE-------QGIPYWIIKNSWGEQWGEQHLT 389

Query: 352 KI 353
           K+
Sbjct: 390 KL 391



 Score = 94.4 bits (233), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 81/158 (51%), Gaps = 21/158 (13%)

Query: 194 QQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD 253
           QQLVDCDH          D GC GG    AF    + GGL    DYPY  + +  AC+F+
Sbjct: 23  QQLVDCDH---------VDRGCEGGFPLDAFMAVQRLGGLQLSIDYPYIASRQ--ACQFN 71

Query: 254 KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV---SCPYICSRRL 310
             +  A V  F+ +  +E  IA  L +NGPL+V +N+  ++ Y  G+   +        L
Sbjct: 72  PKQAVAFVTGFAALPRNELLIAEYLHRNGPLSVGLNSRTLKFYNSGILNLAAEQCDPEAL 131

Query: 311 DHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +H  L VG+G+        +  P+WIIKN++G+ WGE 
Sbjct: 132 NHAALAVGFGTD-------ESTPFWIIKNTFGKDWGEQ 162


>gi|342305188|dbj|BAK55648.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/322 (40%), Positives = 174/322 (54%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           + H+ L+K    K Y  +EE   R  +++ NL++   H        H    G+  F D+T
Sbjct: 25  DEHWDLWKSWHTKKYHEKEE-GWRRMVWEKNLKKIELHNLEHSMGEHTYRLGMNHFGDMT 83

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+   G +RK    +    +  +  N L  P   DWR+ G V PVKDQG CGSCW+
Sbjct: 84  HEEFRQIMYGYKRKSE--RKFKGSLFMEPNFLEAPRSVDWRDNGYVTPVKDQGQCGSCWA 141

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTGA+EG +F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    
Sbjct: 142 FSTTGAMEGQHFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDN 194

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
            GL  E+ YPY GTD    C +D    +A+   F  + S  E  +   +   GP++VAI+
Sbjct: 195 QGLDSEDSYPYLGTD-DQPCHYDPKYNSANDTGFIDIPSGKERALMKAVAAVGPVSVAID 253

Query: 290 AVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+     C S  LDHGVL+VGYG  G     +  K YWI+KNSW E WG
Sbjct: 254 AGHESFQFYQSGIYYEKECSSEELDHGVLVVGYGFEG---EDVDGKKYWIVKNSWSEKWG 310

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + GY  + + R N CG+ +  S
Sbjct: 311 DKGYIYMAKDRKNHCGIATAAS 332


>gi|23344734|gb|AAN28680.1| cathepsin L [Theromyzon tessulatum]
          Length = 351

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 172/315 (54%), Gaps = 26/315 (8%)

Query: 48  STNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATH 103
           S   ++L AE  +  FK + NK Y   EE   R TIF  N +    H  L    + S T 
Sbjct: 29  SNFQEVLDAEVAWHKFKLEHNKVYVGIEEESLRKTIFATNYKFIKDHNALHATGEKSFTV 88

Query: 104 GITQFSDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQ 162
           G+ +F+D+T  EF +   GL+    R+      +P +    LP + DWR KG V  VK+Q
Sbjct: 89  GVNEFADMTVHEFAQMMNGLKPDSTRVSGSTYLSPNIDA-PLPVEVDWRTKGLVSEVKNQ 147

Query: 163 GSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNS 222
           GSCGSCW+FSTTG+LEG +   TG +V LSEQ LVDC            + GCNGGLM +
Sbjct: 148 GSCGSCWAFSTTGSLEGQHMRKTGTMVDLSEQNLVDC-------STSYGNDGCNGGLMTN 200

Query: 223 AFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKN 281
           AF+Y     G+  EE YPY G D    CKF K+K+ A+V  F  + + +E ++   L   
Sbjct: 201 AFKYIKDNKGIDTEEAYPYAGRDGD--CKFKKNKVGATVTGFVEIPAGNEKKLQEALATV 258

Query: 282 GPLAVAINA---VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIK 338
           GP++VAI+A    +M    G    P   S +LDHGVL VGYGS       +  K Y+I+K
Sbjct: 259 GPVSVAIDANHQSFMLYKSGVYDEPECDSAQLDHGVLAVGYGS-------IHGKDYYIVK 311

Query: 339 NSWGESWGENGYYKI 353
           NSWG +WGE GY + 
Sbjct: 312 NSWGTTWGEQGYIRF 326


>gi|15824693|gb|AAL09444.1| cysteine protease [Leishmania donovani]
          Length = 394

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 168/311 (54%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVK+QG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKNQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E     A   LVSLSEQQLV CD +         D+GCNGGLM  AFE+ L+   G +
Sbjct: 158 NIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYGIV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKI--AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPYT  +   A   + SK+   A +  + ++  +E  +AA L +NGP+A+ ++A 
Sbjct: 209 FTEKSYPYTSGNGDVAECLNSSKLVPGARIDGYVMIPSNETVMAAWLAENGPIAIGVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC       L+HGVLLVGY + G         PY +IKNSWGE WGE G
Sbjct: 269 SFMSYQSGVLTSC---AGDALNHGVLLVGYNTTGGV-------PYCVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVAMGLNAC 329


>gi|945081|gb|AAC49361.1| P21 [Petunia x hybrida]
          Length = 358

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 140/348 (40%), Positives = 177/348 (50%), Gaps = 37/348 (10%)

Query: 32  IRQVTDGGDEILSHHESTNNDL--LGAEHH---FSLFKKKFNKAYASQEEHDHRFTIFKA 86
           IRQV        S HE  +  L  +G   H   F+ F +++ K Y S EE   RF IF  
Sbjct: 31  IRQVVSD-----SFHELESGILHVVGQTRHALSFARFARRYGKRYDSVEEIKQRFDIFLD 85

Query: 87  NLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPA 146
           NL     H     S   G+ +FSDLT  EFRR  LG  +        +    L    LP 
Sbjct: 86  NLEMINSHNDKGLSYKLGVNEFSDLTWDEFRRDRLGAAQNCSATTKGNLK--LRDAVLPE 143

Query: 147 DFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPE 206
             DWRE G V PVK+QG CGSCW+FSTTGALE A     GK +SLSEQQLVDC    +  
Sbjct: 144 TKDWREAGIVSPVKNQGKCGSCWTFSTTGALEAAYTQKFGKGISLSEQQLVDCAGAFN-- 201

Query: 207 EPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---AN 263
                + GCNGGL + AFEY    GGL  EE YPYTG  +   CKF    +   V    N
Sbjct: 202 -----NFGCNGGLPSQAFEYIKSNGGLETEEAYPYTG--KNGLCKFSSQNVGVKVTDSVN 254

Query: 264 FSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLLVGY 319
            ++ + DE + A  LV+  P++VA   V   + Y  GV     C      ++H VL VGY
Sbjct: 255 ITLGAEDELKYAVALVR--PVSVAFEVVKGFKQYKSGVYTSTECGTTPMDVNHAVLAVGY 312

Query: 320 GSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
           G   Y        P+W+IKNSWG  WG+N Y+K+  G ++CG+ +  S
Sbjct: 313 G-VEYGV------PFWLIKNSWGADWGDNAYFKMEMGNDMCGIATCAS 353


>gi|312281697|dbj|BAJ33714.1| unnamed protein product [Thellungiella halophila]
          Length = 347

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/377 (34%), Positives = 189/377 (50%), Gaps = 54/377 (14%)

Query: 1   MGSKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHF 60
           M SK + +FL+  ++ S   S TL   +D                    +N+L+  + H 
Sbjct: 1   MASKQIQIFLIVSLISSFCLSITLSRPLD--------------------DNELIMQKRH- 39

Query: 61  SLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH--GITQFSDLTPAEFRR 118
             +  K  + YA  +E ++R+ +FK N+ R  R   +    T    + QF+DLT  EFR 
Sbjct: 40  DEWMAKHGRVYADMKEKNNRYVVFKRNVERIERLNNVPAGRTFKLAVNQFADLTNDEFRS 99

Query: 119 TYLGLRRKLRLPKDADQAPI------LPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            Y G +    L   +           + +  LP   DWR+KGAV P+K+QG+CG CW+FS
Sbjct: 100 MYTGYKGGSVLSSQSGTKTSSFRYQNVSSGALPVSVDWRKKGAVTPIKNQGTCGCCWAFS 159

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
              A+EGA  +  GKL+SLSEQQLVDCD           D GC+GGLM++AFE+ +  GG
Sbjct: 160 AVAAIEGATKIKKGKLISLSEQQLVDCDTN---------DFGCSGGLMDTAFEHIMATGG 210

Query: 233 LMREEDYPYTGTDRGHACKFDKSK-IAASVANFSVVSLDEDQIAANLVKNGPLAVAIN-- 289
           L  E +YPY G D    CK   +K  A S+  +  V +++++     V + P+++ I   
Sbjct: 211 LTTESNYPYKGKD--ATCKIKNTKPTATSITGYEDVPVNDEKALMKAVAHQPVSIGIEGG 268

Query: 290 AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
               Q Y  GV     C+  LDH V  VGYG +           YWIIKNSWG  WGE+G
Sbjct: 269 GFDFQFYGSGVFTGE-CTTYLDHAVTAVGYGQSSNGS------KYWIIKNSWGTKWGESG 321

Query: 350 YYKICR----GRNVCGV 362
           Y +I +     + +CG+
Sbjct: 322 YMRIKKDVKDKKGLCGL 338


>gi|530736|emb|CAA56915.1| cathepsin l [Nephrops norvegicus]
 gi|1582621|prf||2119193B cathepsin L-related Cys protease
          Length = 313

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 172/324 (53%), Gaps = 28/324 (8%)

Query: 53  LLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA-ARHQKLDPSATH---GITQF 108
           L  A   +  FK ++ + Y   +E  +R  +F+ N +   A ++K +         + QF
Sbjct: 5   LATASPSWEHFKTQYGRKYGDAKEELYRQRVFQQNEQLVEAFNKKFENGEVTFKVAMNQF 64

Query: 109 SDLTPAEFRRTYLGLRRKLR-LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGS 167
            D+T  EF     G ++  R  P     A   P   + AD DWR KGAV PVKDQG CGS
Sbjct: 65  GDMTNEEFNAVMKGYKKGSRGEPTTVFTAEGRP---MAADVDWRTKGAVTPVKDQGQCGS 121

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CW+FS TG+LEG +FL   +LVSLSEQ+LVDC  E         + GC GG M SAF+Y 
Sbjct: 122 CWAFSATGSLEGQHFLKNNELVSLSEQELVDCSTEYG-------NDGCGGGWMTSAFDYI 174

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
              GG+  E  YPY   DR  +C+FD + I A+   F  V   E+ +   +   GP++VA
Sbjct: 175 KDNGGIDTESSYPYEAQDR--SCRFDANSIGATCTGFVEVQHTEEALHEAVSDIGPISVA 232

Query: 288 INAVY--MQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           I+A +   Q Y  GV     CS   LDHGVL VGYG+          + YW++KNSWG  
Sbjct: 233 IDASHFSFQFYSSGVYYEKKCSPTNLDHGVLAVGYGTE-------STEDYWLVKNSWGSG 285

Query: 345 WGENGYYKICRGR-NVCGVDSMVS 367
           WG+ GY K+ R R N CG+ S  S
Sbjct: 286 WGDAGYIKMSRNRDNNCGIASEPS 309


>gi|301789679|ref|XP_002930256.1| PREDICTED: cathepsin L1-like [Ailuropoda melanoleuca]
 gi|281343339|gb|EFB18923.1| hypothetical protein PANDA_020645 [Ailuropoda melanoleuca]
          Length = 334

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/313 (40%), Positives = 166/313 (53%), Gaps = 22/313 (7%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRR 118
           +K    + Y   EE   R  +++ N++    H +      HG T     F D+T  EFR+
Sbjct: 32  WKATHRRLYGMNEEGWRR-AVWEKNMKMIDLHNREYSQGQHGFTMAMNAFGDMTNEEFRQ 90

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
              G R +        Q P+    ++P   DW  KG V PVK+QG CGSCW+FS TGALE
Sbjct: 91  VMNGFRNQKPRKGKVFQEPLFA--EIPKSVDWTLKGYVTPVKNQGQCGSCWAFSATGALE 148

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G  F  TGKLVSLSEQ LVDC      E       GCNGGLM++AF+Y  + GGL  EE 
Sbjct: 149 GQMFRKTGKLVSLSEQNLVDCSRSQGNE-------GCNGGLMDNAFQYVKENGGLDSEES 201

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           YPY GTD   +CK+     AA+   F  +   E  +   +   GP++VAI+A +   Q Y
Sbjct: 202 YPYLGTDT-DSCKYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHQSFQFY 260

Query: 297 IGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
             G+   P   S+ LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+ +
Sbjct: 261 KSGIYYDPDCSSKDLDHGVLVVGYGFEG---TDSNNNKFWIVKNSWGPEWGTNGYVKMAK 317

Query: 356 GRNV-CGVDSMVS 367
            +N  CG+ +  S
Sbjct: 318 DQNNHCGIATAAS 330


>gi|119964630|ref|YP_950826.1| cathepsin [Maruca vitrata MNPV]
 gi|119514473|gb|ABL76048.1| cathepsin [Maruca vitrata MNPV]
          Length = 324

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/325 (35%), Positives = 178/325 (54%), Gaps = 23/325 (7%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           DLL A ++F  F  +FNK Y S+ E   RF IF+ NL       + D +A + I +FSDL
Sbjct: 20  DLLKAPNYFEEFVLQFNKNYGSEIEKLRRFKIFQHNLNEIINKNQNDSAAKYEINKFSDL 79

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           +  E    Y GL   ++  ++  +  +L  P    P +FDWR    V  VK+QG CG+CW
Sbjct: 80  SKDETIAKYTGLSLPIQ-TQNFCKVIVLDQPPGKGPFEFDWRRLNKVTNVKNQGVCGACW 138

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +F+   +LE    +   +L+ LSEQQ++DCD         S D+GCNGGL+++AFE  +K
Sbjct: 139 AFAALASLESQFAMKHNQLIDLSEQQMIDCD---------SVDAGCNGGLLHTAFEAVIK 189

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAI 288
            GG+  E+DYPY   +    C+ + +K    V + +  + + E+++   L   GP+ +AI
Sbjct: 190 MGGVQLEKDYPYEAANNN--CRMNSNKFLVKVKDCYRYIIVYEEKLKDLLRSVGPIPMAI 247

Query: 289 NAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +A  +  Y  G+   Y  +  L+H VLLVGYG            PYW  KN+WG  WGE+
Sbjct: 248 DAADIVNYKQGI-IKYCLNSGLNHAVLLVGYGVEN-------NIPYWTFKNTWGTDWGES 299

Query: 349 GYYKICRGRNVCGVDSMVSTVAAAV 373
           GY+++ +  N CG+ + +++ A  V
Sbjct: 300 GYFRLQQNINACGMRNELASTAVIV 324


>gi|342675481|gb|AEL31666.1| cathepsin L [Cynoglossus semilaevis]
          Length = 336

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 172/320 (53%), Gaps = 25/320 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H+ L+K   +K Y  +EE   R  I++ NL +   H        H    G+  F D+T  
Sbjct: 27  HWELWKNWHSKKYHEKEE-GWRRMIWEKNLNKIELHNLEHSMGKHSYRLGMNHFGDMTHE 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EFR+   G +RK    + A  +  +  N +  P+  DWREKG V PVKDQG CGSCW+FS
Sbjct: 86  EFRQIMNGYQRKTE--RKAIGSLFMEPNFMVAPSAVDWREKGYVTPVKDQGQCGSCWAFS 143

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGALZG NF   GKLVSLSEQ LVDC     PE     + GC GGLM+ AF+Y     G
Sbjct: 144 TTGALZGQNFRKMGKLVSLSEQNLVDCSR---PE----GNEGCGGGLMDQAFQYVKDNQG 196

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           L  E+ YPY GTD    C +D    + +   F  + S  E  +   +   GP++VAI+A 
Sbjct: 197 LDSEDSYPYLGTDD-QPCHYDPKYNSVNDTGFVDIPSGKEHALMKAVASVGPVSVAIDAG 255

Query: 292 Y--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  G+     C S  LDHGVL VGYG  G     +  K YWI+KNSW E WG+ 
Sbjct: 256 HESFQFYQSGIYYEKECSSEELDHGVLAVGYGFEGE---DVDGKKYWIVKNSWSEKWGDK 312

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  + + R N CG+ +  S
Sbjct: 313 GYIYMAKDRKNHCGIATAAS 332


>gi|332326593|gb|AEE42620.1| cysteine protease [Leishmania aethiopica]
          Length = 443

 Score =  208 bits (530), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/311 (40%), Positives = 162/311 (52%), Gaps = 29/311 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + + Y +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYWRVYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E    +A  +L +LSEQQLV CD +         DSGC GGLM  AFE+ L+   G +
Sbjct: 158 NIESQWAVAGHRLTALSEQQLVSCDDK---------DSGCGGGLMTQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGT--DRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPY  +  D        +    A +  +  +   E  +AA L K+GP+++ ++A 
Sbjct: 209 FTEDSYPYVSSXGDVPECTNSSQLVPGARIDGYVTIESSETVMAAWLAKSGPISIGVDAS 268

Query: 292 YMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              +Y  GV  SC       L+HGVLLVGY   G       E PYW+IKNSWGE WGE G
Sbjct: 269 SFMSYESGVLTSC---AGBXLNHGVLLVGYNXTG-------EVPYWVIKNSWGEDWGEKG 318

Query: 350 YYKICRGRNVC 360
           Y ++  G N C
Sbjct: 319 YVRVAMGVNAC 329


>gi|403367386|gb|EJY83513.1| Cathepsin L [Oxytricha trifallax]
          Length = 339

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/310 (42%), Positives = 173/310 (55%), Gaps = 29/310 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA-THGITQFSDLTPAEFRR 118
           F+ +  K+ K+Y ++EE   RF  ++ N+   A H   + +  T    +F+D TPAE+++
Sbjct: 43  FANYLAKYGKSYGTKEEFQFRFQQYQQNMALIAHHNSNNENTFTLASNKFADYTPAEYKK 102

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
             LG +R   +PK   Q        +P   DWR KGAV PVKDQG CGSCW+FSTTG+LE
Sbjct: 103 L-LGYKR---MPKANAQYAEFDLTAVPDSIDWRTKGAVTPVKDQGQCGSCWAFSTTGSLE 158

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G + +ATG L S SEQQLVDCD+  D  +      GCNGG M  A +Y+ K   L  E D
Sbjct: 159 GRDAIATGTLQSYSEQQLVDCDYSTDGNQ------GCNGGDMGLAMDYSAK-NPLELESD 211

Query: 239 YPYTGTDRGHACKFDK--SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYM--Q 294
           YPY   D   + K DK  SK      N    SL + + A   +  GP++VAI A  M  Q
Sbjct: 212 YPYKAIDGKCSYKADKGHSKNKGHT-NVKQNSLPDLKAA---IAQGPVSVAIEADTMVFQ 267

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y GG+     C   LDHGVL VGYGS          KPY+I+KNSWG SWGE GY +I 
Sbjct: 268 FYNGGILNSKSCGTNLDHGVLAVGYGSE-------NNKPYYIVKNSWGPSWGEQGYLRIA 320

Query: 355 R--GRNVCGV 362
           +  G  +CG+
Sbjct: 321 QVDGAGICGI 330


>gi|2804264|dbj|BAA24443.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  208 bits (529), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 132/324 (40%), Positives = 177/324 (54%), Gaps = 30/324 (9%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA----THGITQFSDL 111
            +  +S FK + +K Y S+ E   R  IF  N  + A+H KL          G+ +++D+
Sbjct: 23  VQEQWSSFKMQHSKNYDSETEERFRMKIFMENAHKVAKHSKLFSQGFVKFKLGLNKYADM 82

Query: 112 TPAEFRRTYLGLRR-KLRLPKDADQAP----ILPTN-DLPADFDWREKGAVGPVKDQGSC 165
              EF  T  G  + K  + K +D       I P N  LP   DWR+KGAV  VKDQG C
Sbjct: 83  LHHEFVSTLNGFNKTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTKVKDQGHC 142

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           GSCWSFS +G+LEG +F  TGKLVSLSEQ LVDC            ++GCNGGLM++AF 
Sbjct: 143 GSCWSFSGSGSLEGQHFRKTGKLVSLSEQNLVDCSGRYG-------NNGCNGGLMDNAFR 195

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPL 284
           Y    GG+  E+ YPY   D    C +      A+   F  +   +ED + A +   GP+
Sbjct: 196 YIKDNGGIDTEQSYPYLAEDE--KCHYKTQNSGATDKGFVDIEEGNEDDLKAAVATVGPI 253

Query: 285 AVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           ++AI+A Y   Q Y  GV S P   S+ LDHGVL+VGYG++         + YW++KNSW
Sbjct: 254 SIAIDASYETFQLYSDGVYSDPECISQELDHGVLVVGYGTSDDG------QDYWLVKNSW 307

Query: 342 GESWGENGYYKICRGR-NVCGVDS 364
             S G NGY K+ R + N+CGV S
Sbjct: 308 RPSCGLNGYIKMARNQDNMCGVAS 331


>gi|403300975|ref|XP_003941187.1| PREDICTED: cathepsin L1-like isoform 1 [Saimiri boliviensis
           boliviensis]
 gi|403300977|ref|XP_003941188.1| PREDICTED: cathepsin L1-like isoform 2 [Saimiri boliviensis
           boliviensis]
 gi|403300979|ref|XP_003941189.1| PREDICTED: cathepsin L1-like isoform 3 [Saimiri boliviensis
           boliviensis]
          Length = 333

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/321 (39%), Positives = 174/321 (54%), Gaps = 27/321 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLT 112
           E  +  +K   N+ Y   EE + R  +++ N++    H        H  T     F D+T
Sbjct: 26  EAQWIKWKAMHNRLYGKNEE-EWRRAVWEKNMKTIELHNHEYNQGKHSFTMAMNTFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDAD--QAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+   G +   R P++    Q P+L  ++ P   DWREKG V PVK+QG CGSCW+
Sbjct: 85  NEEFRQVMNGFQN--RKPRNGKVFQEPLL--HEAPRSVDWREKGYVTPVKNQGQCGSCWA 140

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FS TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y  + 
Sbjct: 141 FSATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQ----GNQGCNGGLMDYAFQYVQEN 193

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           GGL  EE YPY  T+   +CK++     A+   F  +   E  +   +   GP++VAI+A
Sbjct: 194 GGLDSEESYPYEATEE--SCKYNPKYSVANDTGFVDIPKLEKALMKAVATVGPISVAIDA 251

Query: 291 VY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
            +   Q Y  G+   P   S  +DHGVL+VGY   G+         YW++KNSWGE WG 
Sbjct: 252 GHESFQFYKEGIYFEPECSSEDMDHGVLVVGY---GFERTGSDNSKYWLVKNSWGEEWGM 308

Query: 348 NGYYKICRGR-NVCGVDSMVS 367
           +GY K+ + R N CG+ S  S
Sbjct: 309 DGYIKMAKDRKNHCGIASAAS 329


>gi|2414570|emb|CAB16317.1| cysteine proteinase precursor [Nicotiana tabacum]
          Length = 374

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/354 (36%), Positives = 190/354 (53%), Gaps = 31/354 (8%)

Query: 10  LVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNK 69
           +++ ++F+  SS +   D+      + D  +   +   +  +D    ++ + ++  +  +
Sbjct: 5   IITTLLFALFSSLSYAIDM-----SIIDYKNNHYARKWTLQSDEDQVKNRYEMWLAEHGR 59

Query: 70  AYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRRTYLGL----R 124
           AY +  E + RF IFK NLR    H    + +   G+ QF+DLT  E+R  YLG     R
Sbjct: 60  AYNALGEKEKRFEIFKDNLRFIEGHNNSGNRTYKVGLNQFADLTNEEYRTMYLGTKSDAR 119

Query: 125 RKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFL 183
           R+    K+  Q      N+L P   DWR++GAV P+K+QGSCGSCW+FST  A+EG N +
Sbjct: 120 RRFVKSKNPSQRYASRPNELMPHSVDWRKRGAVAPIKNQGSCGSCWAFSTVAAVEGINQI 179

Query: 184 ATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG 243
            TG++++LSEQ+LVDCD           +SGCNGGLM+ AFE+ +  GG+  E+ YPY G
Sbjct: 180 VTGEMITLSEQELVDCDR--------VQNSGCNGGLMDYAFEFIISNGGMDTEKHYPYRG 231

Query: 244 TDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVS 301
            + G      K+    S+  +  V  +E  +    V + P+ VAI A     Q Y  GV 
Sbjct: 232 VE-GRCDPVRKNYKVVSIDGYEDVPRNERAL-QKAVAHQPVCVAIEASGRAFQLYSSGVF 289

Query: 302 CPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
               C   +DHGV++VGYGS            YWI++NSWG  WGENGY K+ R
Sbjct: 290 TGE-CGEEVDHGVVVVGYGSEDGV-------DYWIVRNSWGTKWGENGYVKMER 335


>gi|255550445|ref|XP_002516273.1| cysteine protease, putative [Ricinus communis]
 gi|223544759|gb|EEF46275.1| cysteine protease, putative [Ricinus communis]
          Length = 358

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 141/362 (38%), Positives = 187/362 (51%), Gaps = 35/362 (9%)

Query: 16  FSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKKKFNKAYA 72
           F    SG+  D+ +  IR V+D     L   E++   ++G       FS F  +  K Y 
Sbjct: 17  FCVAVSGSNFDESNP-IRLVSD----RLRDFEASVTKVVGHSRRALSFSRFVYRHGKRYQ 71

Query: 73  SQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKD 132
           S++E   RF IF  NL       +   S T  +  F+DLT  EF++  LG  +       
Sbjct: 72  SEDEMKMRFAIFSENLDFIRSTNRKGLSYTLAVNDFADLTWQEFQKHRLGAAQNCSATTK 131

Query: 133 ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLS 192
            +    L    LP   DWRE G V PVK+QG CGSCW+FSTTGALE A   A GK +SLS
Sbjct: 132 GNHK--LTGVALPDTKDWREVGIVSPVKNQGHCGSCWTFSTTGALEAAYHQAFGKGISLS 189

Query: 193 EQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 252
           EQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG D   ACKF
Sbjct: 190 EQQLVDCAGAFN-------NFGCHGGLPSQAFEYIKYNGGLETEEAYPYTGED--GACKF 240

Query: 253 DKSKIAASV---ANFSVVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSR 308
               +   V    N ++ + DE + A  LV+  P++VA   V   + Y  GV     C  
Sbjct: 241 SSENVGIQVLDSVNITLGAEDELKEAVGLVR--PVSVAFEVVSGFRFYKSGVYTSDTCGS 298

Query: 309 R---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSM 365
               ++H VL VGYG            PYW++KNSWGE+WG++GY+K+  G+N+CGV + 
Sbjct: 299 TPMDVNHAVLAVGYGVE-------DGVPYWLVKNSWGENWGDHGYFKMEMGKNMCGVATC 351

Query: 366 VS 367
            S
Sbjct: 352 AS 353


>gi|71400414|ref|XP_803044.1| cysteine peptidase [Trypanosoma cruzi strain CL Brener]
 gi|70865609|gb|EAN81598.1| cysteine peptidase, putative [Trypanosoma cruzi]
          Length = 467

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/320 (38%), Positives = 166/320 (51%), Gaps = 33/320 (10%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ FK+K  + Y S  E   R ++F+ANL  A  H   +P AT G+T FSDLT  EFR 
Sbjct: 37  QFAEFKQKHGRVYGSAAEEAFRLSVFRANLFLARLHAAANPHATFGVTPFSDLTREEFRS 96

Query: 119 TY-------LGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
            Y          + + R+P D +          PA  DWRE+GAV  VK+QG CGSCW+F
Sbjct: 97  RYHNGAAHFAAAQERARVPVDVEFV------GAPAAKDWREEGAVTAVKNQGMCGSCWAF 150

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL--K 229
           +  G +E   FLA   L  LSEQ LV CD+          +SGC GG    AF++ +   
Sbjct: 151 AAIGNIECQWFLAGNPLTRLSEQMLVSCDNT---------NSGCGGGWPLVAFKWIVDRN 201

Query: 230 AGGLMREEDYPY-TGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI 288
            G +  EE YPY +       C      + A++  +  +  DE+ IAA L  NGP+AV +
Sbjct: 202 NGTVYTEESYPYHSCIGISPPCTTSGHTVGATITGYVTIPRDENGIAAWLAVNGPVAVVV 261

Query: 289 NAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +A     Y GGV    + S++L H VLLVGY  +          P+WIIKNSW   WGE+
Sbjct: 262 DASSWIFYTGGVMTSCV-SKQLSHAVLLVGYNDSATV-------PHWIIKNSWTTHWGED 313

Query: 349 GYYKICRGRNVCGVDSMVST 368
           GY +I +G N C V   VS+
Sbjct: 314 GYIRIAKGSNQCLVKEGVSS 333


>gi|449522968|ref|XP_004168497.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 348

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 128/328 (39%), Positives = 178/328 (54%), Gaps = 31/328 (9%)

Query: 52  DLLGAEHHFSLFKKKFN---KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQF 108
           DL   +    LF++  +   K Y + EE  HRF +FK NL+      K   S   G+ +F
Sbjct: 34  DLTSMDRLIELFEEWISNHGKIYETIEEKWHRFEVFKDNLKHIDETNKKVTSYWLGVNEF 93

Query: 109 SDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGS 167
           +DLT  EF+  YLGL+    R  +  ++       DLP   DWR+KGAV  VK+QGSCGS
Sbjct: 94  ADLTHQEFKNMYLGLKVESSRTRQSPEEFTYKDVVDLPKSVDWRKKGAVTRVKNQGSCGS 153

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CW+FST  A+EG N +  G L SLSEQ+L+DCD           ++GC+GGLM+ AF + 
Sbjct: 154 CWAFSTVAAVEGINKIVGGNLTSLSEQELIDCDR--------PYNNGCHGGLMDYAFSFI 205

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAV 286
           + +GGL +EEDYPY   +    C   K ++   +++ +  V  + +      + + PL+V
Sbjct: 206 VSSGGLHKEEDYPYLEVES--TCDNKKGELEVVTISGYKDVPENNEASLIKALAHQPLSV 263

Query: 287 AINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           AI A     Q Y GGV   P  C  +LDHGV  VGYGS+       K   Y I+KNSWG 
Sbjct: 264 AIEASGRDFQFYSGGVFDGP--CGTQLDHGVTAVGYGSS-------KGVDYIIVKNSWGP 314

Query: 344 SWGENGYYKICRGR----NVCGVDSMVS 367
            WGE GY ++ R       +CG++ M S
Sbjct: 315 KWGEKGYIRMKRNTGKPAGLCGINKMAS 342


>gi|348514005|ref|XP_003444531.1| PREDICTED: cathepsin L1-like [Oreochromis niloticus]
          Length = 338

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/322 (40%), Positives = 171/322 (53%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           + H++L+K    K Y  +EE   R  +++ NL++   H        H    G+  F D+T
Sbjct: 27  DEHWNLWKSWHTKKYHEKEE-GWRRMVWEKNLKKIELHNLDHSMGKHTYRLGMNHFGDMT 85

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+   G + K    +    +  L  N L  P   DWR+KG V PVKDQG CGSCW+
Sbjct: 86  NEEFRQLMNGYKHKAE--RKVKGSLFLEPNFLEAPRSLDWRDKGYVTPVKDQGQCGSCWA 143

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FS TGALEG  F  TGK+V LSEQ LV+C     PE     + GCNGGLM+ AF+Y    
Sbjct: 144 FSATGALEGQQFRKTGKMVQLSEQNLVECSR---PE----GNEGCNGGLMDQAFQYVKDN 196

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
            GL  EE YPY GTD    C +D    A +   F  + S  E  +   +   GP++VAI+
Sbjct: 197 QGLDSEESYPYLGTD-DQKCHYDPRYNAVNDTGFVDIKSGSEHALMKAVTAVGPISVAID 255

Query: 290 AVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+   P   S  LDHGVLLVGYG  G     +  K YWI+KNSW E WG
Sbjct: 256 AGHESFQFYQSGIYYEPECSSEELDHGVLLVGYGFEG---EDVDGKKYWIVKNSWSEKWG 312

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + GY  + + R N CG+ +  S
Sbjct: 313 DKGYVYMAKDRQNHCGIATAAS 334


>gi|157093355|gb|ABV22332.1| cysteine protease 1 [Noctiluca scintillans]
          Length = 338

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 133/332 (40%), Positives = 171/332 (51%), Gaps = 41/332 (12%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           + + HE    D +     F+ FK K+ K Y    E   RF IFKAN+         + + 
Sbjct: 12  VAAGHEVPPPDYM---MMFNNFKTKYGKVYNGINEDAVRFGIFKANVDIIYATNARNLTF 68

Query: 102 THGITQFSDLTPAEFRRTYLGLRRKLR---LPK----DADQAPILPTNDLPADFDWREKG 154
             G+ +F+DLT  E   +Y GL+       LP+    + + AP      L +  DW  +G
Sbjct: 69  ALGVNEFTDLTQEELAASYTGLKPASLWSGLPRLSTHEYNGAP------LASSVDWTTQG 122

Query: 155 AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 214
            V PVK+QG CGSCWSFSTTGALEGA  L+TG LVSLSEQQ VDCD         + DSG
Sbjct: 123 VVTPVKNQGQCGSCWSFSTTGALEGAWALSTGNLVSLSEQQFVDCD---------TTDSG 173

Query: 215 CNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIA---ASVANFSVVSLDE 271
           CNGG M++AF +  K   +  E  YPYT TD    C     ++      V  ++ VS D 
Sbjct: 174 CNGGWMDNAFSFA-KKNSICTEGSYPYTATD--GTCNLSGCQVGIPQGGVVGYTDVSTDS 230

Query: 272 DQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRL 329
           +Q   + V   P+++AI A     Q Y  GV     C  RLDHGVL VGYGS        
Sbjct: 231 EQAMMSAVAQQPVSIAIEADQYSFQLYSSGV-LTASCGTRLDHGVLAVGYGSE------- 282

Query: 330 KEKPYWIIKNSWGESWGENGYYKICRGRNVCG 361
               YW +KNSWG SWGE GY ++ RG+   G
Sbjct: 283 AGTDYWKVKNSWGSSWGEQGYVRLQRGKGGAG 314


>gi|116779845|gb|ABK21448.1| unknown [Picea sitchensis]
 gi|116791731|gb|ABK26088.1| unknown [Picea sitchensis]
 gi|224286276|gb|ACN40847.1| unknown [Picea sitchensis]
          Length = 357

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 192/379 (50%), Gaps = 42/379 (11%)

Query: 3   SKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEH---H 59
           ++ + + L +L+  +   S     +  + I  VTD     + + ES+   +LG       
Sbjct: 2   ARILAIVLSTLLALAIAVSAARSFEETEYIDMVTDK----IQNLESSLFKILGTNPKSVQ 57

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F+ F  ++ K Y S  +  HRF  F  N+        ++   T  I +F+D+T  EF   
Sbjct: 58  FAEFALRYGKRYDSVRQLVHRFNAFVKNVELIESRNSMNLPYTLAINEFADITWEEFHGQ 117

Query: 120 YLGLRRKLRLPKD----ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YLG  +     K      D  P       P   DWRE+G V PVK+Q  CGSCW+FSTTG
Sbjct: 118 YLGASQNCSATKSNHKFTDAQP-------PTKKDWREEGIVSPVKNQAHCGSCWTFSTTG 170

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           ALE A   ATGK V LSEQQLVDC    +       + GC+GGL + AFEY    GGL  
Sbjct: 171 ALEAAYTQATGKTVILSEQQLVDCAGAFN-------NFGCSGGLPSQAFEYIKYNGGLDT 223

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVA---NFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           EE YPYT  D    C +D + +   VA   N S+ + DE + A  LV+  P++VA   + 
Sbjct: 224 EEAYPYTAKD--GVCNYDVNNVGVKVADSVNISLGAEDELKSAVGLVR--PVSVAFQVIQ 279

Query: 293 -MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
             + Y  GV     C +    ++H VL VGYG      +  +  P+WIIKNSWG+SWG  
Sbjct: 280 DFRFYKEGVFTSTTCGQGPMDVNHAVLAVGYG------VSEEGTPHWIIKNSWGKSWGVE 333

Query: 349 GYYKICRGRNVCGVDSMVS 367
           GY+K+  G+N+CGV +  S
Sbjct: 334 GYFKMEMGKNMCGVATCAS 352


>gi|402770509|gb|AFQ98389.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 166/320 (51%), Gaps = 28/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K Y S  E   RF IF  +     R  A++ K   S   G+ QF DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTESSLIIARHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF R + G     R    +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL  G+LVSLSEQ LVDC            ++GC GGLM  AF+Y     G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C+F K  + A+   +  + +  ED +   +   GP++VAI+A 
Sbjct: 198 IDTEKSYPYEAVDG--ECRFKKEDVGATDTGYVEIKAGSEDDLKKAVATVGPISVAIDAS 255

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV   P   S  LDHGVL+VGYG  G        K YW++KNSW ESWG+ 
Sbjct: 256 HSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQ 308

Query: 349 GYYKICR-GRNVCGVDSMVS 367
           GY  + R   N CG+ S  S
Sbjct: 309 GYILMSRDNNNQCGIASQAS 328


>gi|2351557|gb|AAB68595.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 116/322 (36%), Positives = 176/322 (54%), Gaps = 23/322 (7%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           DLL A  +F  F   FNK Y+S+ E  HRF IF+ NL         D SA + I +FSDL
Sbjct: 20  DLLKAPSYFEDFLHNFNKNYSSKSEKLHRFKIFQHNLEEIINKNLNDTSAQYEINKFSDL 79

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPIL--PTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
           +  E    Y GL   L+  ++  +  +L  P +  P +FDWR    V  VK+QG+CG+CW
Sbjct: 80  SKDETISKYTGLSLPLQ-NQNFCEVVVLNRPPDKGPLEFDWRRLNKVTSVKNQGTCGACW 138

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +F+T G+LE    +   +L++LSEQQL+DCD           D GC+GGL+++A+E  + 
Sbjct: 139 AFATLGSLESQFAIKHDQLINLSEQQLIDCDF---------VDMGCDGGLLHTAYEAVMN 189

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAI 288
            GG+  E DYPY   +    C+ + +K    V   +  +++ E+++   L   GP+ VAI
Sbjct: 190 MGGIQAENDYPYEANNGD--CRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAI 247

Query: 289 NAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +A  +  Y  G+   Y  +  L+H VLLVGY             P+WI+KN+WG  WGE 
Sbjct: 248 DASDIVNYKRGI-MKYCANHGLNHAVLLVGYAVQNGV-------PFWILKNTWGADWGEQ 299

Query: 349 GYYKICRGRNVCGVDSMVSTVA 370
           GY+++ +  N CG+ + + + A
Sbjct: 300 GYFRVQQNINACGIQNELPSSA 321


>gi|168017893|ref|XP_001761481.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687165|gb|EDQ73549.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 471

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/304 (42%), Positives = 172/304 (56%), Gaps = 28/304 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  + ++ ++ Y S  E   RF IFK NL     H K + S   G+ +FSDLT  EFR  
Sbjct: 52  FHQWLERHSRVYHSLSEKQRRFQIFKDNLHYIHNHNKQEKSYWLGLNKFSDLTHDEFRAL 111

Query: 120 YLGLRRKLRLP--KDADQAPILPTNDLPAD--FDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YLG+R   R    ++ D+       D+ A+   DWR+KGAV  VKDQGSCGSCW+FS  G
Sbjct: 112 YLGIRPAGRAHGLRNGDR---FIYEDVVAEEMVDWRKKGAVSDVKDQGSCGSCWAFSAIG 168

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           ++EG N + TG+L+SLSEQ+LVDCD           + GCNGGLM+ AF++ +K GG+  
Sbjct: 169 SVEGVNAIVTGELISLSEQELVDCDR--------GQNQGCNGGLMDYAFDFIIKNGGIDT 220

Query: 236 EEDYPYTGTD-RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VY 292
           EEDYPY  TD +    + + SK+   + ++  V    +      V   P++VAI A    
Sbjct: 221 EEDYPYKATDGQCDEARKETSKVVV-IDDYQDVPTKSESSLLKAVSKNPVSVAIEAGGRD 279

Query: 293 MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Q Y GGV + P  C   LDHGVL VGYG+            YWI+KNSWG SWGE GY 
Sbjct: 280 FQHYQGGVFTGP--CGTDLDHGVLAVGYGTDDDGV------NYWIVKNSWGPSWGEKGYI 331

Query: 352 KICR 355
           ++ R
Sbjct: 332 RMER 335


>gi|194689248|gb|ACF78708.1| unknown [Zea mays]
 gi|414885653|tpg|DAA61667.1| TPA: cysteine protease2 [Zea mays]
          Length = 360

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/346 (39%), Positives = 176/346 (50%), Gaps = 31/346 (8%)

Query: 32  IRQVTDGGDEILSHHESTNNDLLGAEH---HFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           IR VTD     L   EST    LG       F+ F  ++ K+Y S  E   RF IF  +L
Sbjct: 31  IRPVTDRAASAL---ESTVFAALGRTRDALRFARFAVRYGKSYESAAEVHKRFRIFSESL 87

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
           +      +   S   GI +F+D++  EFR T LG  +        +         LP   
Sbjct: 88  QLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETK 147

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWRE G V PVK+QG CGSCW+FSTTGALE A   ATGK +SLSEQQL+DC    +    
Sbjct: 148 DWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLIDCGFAFN---- 203

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFS 265
              + GCNGGL + AFEY    GGL  EE YPY G +    CKF    +   V    N +
Sbjct: 204 ---NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN--GICKFKNENVGVKVLDSVNIT 258

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLLVGYGS 321
           + + DE + A  LV+  P++VA   +   + Y  GV     C      ++H VL VGYG 
Sbjct: 259 LGAEDELKDAVGLVR--PVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGV 316

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
                      PYW+IKNSWG  WG+ GY+K+  G+N+CGV +  S
Sbjct: 317 E-------DGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCAS 355


>gi|12597541|ref|NP_075125.1| cathepsin [Helicoverpa armigera nucleopolyhedrovirus G4]
 gi|15426394|ref|NP_203611.1| cathepsin [Helicoverpa armigera NPV]
 gi|12483807|gb|AAG53799.1|AF271059_56 cathepsin [Helicoverpa armigera nucleopolyhedrovirus G4]
 gi|15384470|gb|AAK96381.1|AF303045_123 cathepsin [Helicoverpa armigera NPV]
 gi|18027090|gb|AAL55725.1|AF268612_1 cathepsin [Helicoverpa armigera NPV]
          Length = 365

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/329 (36%), Positives = 172/329 (52%), Gaps = 39/329 (11%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQK------------LDP 99
           +L  +E +F  F +++NK+Y   +E+ +R+ +FK NL +     +            L  
Sbjct: 47  NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLST 106

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL---PTNDLPADFDWREKGAV 156
           SA  G+ +FSD TP E   +  G    L       +  I+   P   LP  +DWR+   V
Sbjct: 107 SAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPNIRLPDYYDWRDTNKV 166

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
            P+KDQG CGSCW+F   G +E    +   KL+ LSEQQL+DCD           D GCN
Sbjct: 167 TPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCN 217

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIA 275
           GGLM+ AF+  L  GG+  E DYPY G+++   C  D  KIA  + + F     DE+++ 
Sbjct: 218 GGLMHLAFQELLLMGGVETEADYPYQGSEQ--MCTLDNRKIAVKLNSCFKYDIRDENKLK 275

Query: 276 ANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKP 333
             +   GP+A+A++A+ +  Y  G+   C       L+H VLL+G+G            P
Sbjct: 276 ELVYTTGPVAIAVDAMDIINYRRGILNQCHIY---DLNHAVLLIGWGIEN-------NVP 325

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGV 362
           YWIIKNSWGE WGENGY ++ R  N CG+
Sbjct: 326 YWIIKNSWGEDWGENGYLRVRRNVNACGL 354


>gi|340504799|gb|EGR31212.1| papain family cysteine protease, putative [Ichthyophthirius
           multifiliis]
          Length = 250

 Score =  208 bits (529), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 103/224 (45%), Positives = 138/224 (61%), Gaps = 17/224 (7%)

Query: 144 LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHEC 203
           LP+ FDWRE+G + PVK Q +CG CW+F+TTG +E    L   KLV+ SEQQL+DCD   
Sbjct: 39  LPSYFDWREQGIITPVKYQDTCGGCWTFATTGVIESQYALKYNKLVNFSEQQLIDCD--- 95

Query: 204 DPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN 263
                 S + GC GGLM  A++   + GGL   EDY      +G  CK D +K++A V N
Sbjct: 96  ------SINDGCRGGLMTDAYKAIQEMGGLETSEDYGEYLNSKGQ-CKIDSNKVSAKVIN 148

Query: 264 FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAG 323
           +  +S DE+ I   LV+NGP+AV +NA ++Q Y GG+  P +C   ++H VL+VGYG   
Sbjct: 149 WYQISEDEEAIRRELVQNGPIAVGVNARFLQFYQGGILDPKLCDDSINHAVLIVGYGEE- 207

Query: 324 YAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
                   K YWIIKN WG+SWG NGY+K+ RG+  CGV +  S
Sbjct: 208 ------NGKKYWIIKNQWGKSWGINGYFKLVRGKKQCGVHTYAS 245


>gi|23452059|gb|AAN32912.1| cathepsin [Danio rerio]
          Length = 310

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 130/299 (43%), Positives = 159/299 (53%), Gaps = 24/299 (8%)

Query: 80  RFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRRTYLGLRRK--LRLPKDA 133
           R   +K NL+    H        H    G+  F D+T  EFR+   G + K   R     
Sbjct: 21  RRIFWKKNLKXIEMHNLXHSMGIHTYRLGMNHFGDMTHEEFRQVMNGFKHKKDRRFRGSL 80

Query: 134 DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSE 193
              P     ++P   DWREKG V PVKDQG CGSCW+FSTTGALEG  F  TGKLVSLSE
Sbjct: 81  FMEPXFI--EVPNKLDWREKGYVTPVKDQGECGSCWAFSTTGALEGQMFRKTGKLVSLSE 138

Query: 194 QQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFD 253
           Q LVDC     PE     + GCNGGLM+ AF+Y     GL  EE YPY GTD    C FD
Sbjct: 139 QNLVDCSR---PE----GNEGCNGGLMDQAFQYVKDQNGLDSEESYPYLGTDD-QPCHFD 190

Query: 254 KSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYIC-SRR 309
               AA+   F  + S  E  +   +   GP++VAI+A +   Q Y  G+     C S  
Sbjct: 191 PKNSAANDTGFVDIPSGKERALMKAIAAVGPVSVAIDAGHESFQFYQSGIYYEKECSSEE 250

Query: 310 LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           LDHGVL VGYG  G     +  K YWI+KNSW E+WG+ GY  + + R N CG+ +  S
Sbjct: 251 LDHGVLAVGYGFEGED---VDGKKYWIVKNSWSENWGDKGYIYMAKDRHNHCGIATAAS 306


>gi|344310882|gb|AEN03980.1| cathepsin-like cysteine proteinase [Helicoverpa armigera NPV strain
           Australia]
          Length = 367

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/329 (36%), Positives = 172/329 (52%), Gaps = 39/329 (11%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQK------------LDP 99
           +L  +E +F  F +++NK+Y   +E+ +R+ +FK NL +     +            L  
Sbjct: 49  NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLST 108

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL---PTNDLPADFDWREKGAV 156
           SA  G+ +FSD TP E   +  G    L       +  I+   P   LP  +DWR+   V
Sbjct: 109 SAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPNIRLPDYYDWRDTNKV 168

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
            P+KDQG CGSCW+F   G +E    +   KL+ LSEQQL+DCD           D GCN
Sbjct: 169 TPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCN 219

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIA 275
           GGLM+ AF+  L  GG+  E DYPY G+++   C  D  KIA  + + F     DE+++ 
Sbjct: 220 GGLMHLAFQELLLMGGVETEADYPYQGSEQ--MCTLDNRKIAVKLNSCFKYDIRDENKLK 277

Query: 276 ANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKP 333
             +   GP+A+A++A+ +  Y  G+   C       L+H VLL+G+G            P
Sbjct: 278 ELVYTTGPVAIAVDAMDIINYRRGILNQCHIY---DLNHAVLLIGWGIEN-------NVP 327

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGV 362
           YWIIKNSWGE WGENGY ++ R  N CG+
Sbjct: 328 YWIIKNSWGEDWGENGYLRVRRNVNACGL 356


>gi|42564159|gb|AAS20591.1| digestive cysteine proteinase intestain [Leptinotarsa decemlineata]
          Length = 326

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/312 (38%), Positives = 174/312 (55%), Gaps = 22/312 (7%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRA----ARHQKLDPSATHGITQFSDLTPAEFRR 118
           FK+   K Y S  E   RF IF++NLR+     A++ K + S   G+T F+DLT  EF+ 
Sbjct: 26  FKQTHGKTYKSLLEERTRFGIFQSNLRKIEEHNAKYDKGEESYFLGVTPFADLTHDEFKD 85

Query: 119 TYLGLRRKLRLPKDADQA-PILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
               LRR+++   + +    + P   ++P   DW +KGAV  VK QG CGSCW+FS TGA
Sbjct: 86  E---LRRQIKTKPNVEATLAVFPEGLEVPDSIDWTQKGAVLDVKYQGGCGSCWAFSATGA 142

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LEG N +     + LSEQQL+DC       +P   D   +GGLM+ AF+Y L   G+  +
Sbjct: 143 LEGQNAIVNNVKIPLSEQQLLDC------SKPYGNDDCEHGGLMSFAFDYVLDK-GIEAD 195

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTY 296
             YPY G D    C++D  K    +  +  VS  E+++   +   GP++VAI+A  +Q Y
Sbjct: 196 SSYPYKGIDT--PCQYDAKKTVLKIKGYKNVSNSEEELKKAVGTVGPVSVAIDADPIQLY 253

Query: 297 IGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR- 355
            GG+     C+  L+HGVL VGYG   +      +K +W +KNSWG+ WGE GY++I R 
Sbjct: 254 FGGILDGLFCTHNLNHGVLAVGYGEEDHL---FGKKKFWKVKNSWGKDWGEQGYFRIKRD 310

Query: 356 GRNVCGVDSMVS 367
             N+CG+    S
Sbjct: 311 ANNLCGIADKAS 322


>gi|449455625|ref|XP_004145553.1| PREDICTED: xylem cysteine proteinase 1-like [Cucumis sativus]
          Length = 351

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 128/328 (39%), Positives = 178/328 (54%), Gaps = 31/328 (9%)

Query: 52  DLLGAEHHFSLFKKKFN---KAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQF 108
           DL   +    LF++  +   K Y + EE  HRF +FK NL+      K   S   G+ +F
Sbjct: 37  DLTSMDRLIELFEEWISNHGKIYETIEEKWHRFEVFKDNLKHIDETNKKVTSYWLGVNEF 96

Query: 109 SDLTPAEFRRTYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGS 167
           +DLT  EF+  YLGL+    R  +  ++       DLP   DWR+KGAV  VK+QGSCGS
Sbjct: 97  ADLTHQEFKNMYLGLKVESSRTRQSPEEFTYKDVVDLPKSVDWRKKGAVTRVKNQGSCGS 156

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CW+FST  A+EG N +  G L SLSEQ+L+DCD           ++GC+GGLM+ AF + 
Sbjct: 157 CWAFSTVAAVEGINKIVGGNLTSLSEQELIDCDR--------PYNNGCHGGLMDYAFSFI 208

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAV 286
           + +GGL +EEDYPY   +    C   K ++   +++ +  V  + +      + + PL+V
Sbjct: 209 VSSGGLHKEEDYPYLEVES--TCDNKKGELEVVTISGYKDVPENNEASLIKALAHQPLSV 266

Query: 287 AINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           AI A     Q Y GGV   P  C  +LDHGV  VGYGS+       K   Y I+KNSWG 
Sbjct: 267 AIEASGRDFQFYSGGVFDGP--CGTQLDHGVTAVGYGSS-------KGVDYIIVKNSWGP 317

Query: 344 SWGENGYYKICRGR----NVCGVDSMVS 367
            WGE GY ++ R       +CG++ M S
Sbjct: 318 KWGEKGYIRMKRNTGKPAGLCGINKMAS 345


>gi|394331826|gb|AFN27132.1| cysteine protease [Leishmania tropica]
          Length = 443

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 165/312 (52%), Gaps = 31/312 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTVAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWR+KGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWRKKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
           ++E    LA   L +LSEQQLV CD +         D+GC+GGLM  AFE+ L+   G +
Sbjct: 158 SIESQWALAGHGLTALSEQQLVSCDDK---------DNGCSGGLMLQAFEWLLRNMNGTM 208

Query: 234 MREEDYPYTGTDRGHACKFDKSK---IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
             E+ YPY  +  G+  +   S      A +  +  +   E    A L KNGP+++A++A
Sbjct: 209 FTEDSYPYVSSS-GYVPECSNSSQLVPGARIEGYMTIESSETVKGAWLAKNGPISIAVDA 267

Query: 291 VYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               +Y  GV  SC       L+HGVLLVGY   G       E PYW+IKNSWGE WGE 
Sbjct: 268 SSFMSYQSGVLTSC---AGDALNHGVLLVGYNRTG-------EVPYWVIKNSWGEDWGEK 317

Query: 349 GYYKICRGRNVC 360
           GY ++  G N C
Sbjct: 318 GYVRVTMGVNAC 329


>gi|226508570|ref|NP_001141984.1| uncharacterized protein LOC100274134 precursor [Zea mays]
 gi|194706676|gb|ACF87422.1| unknown [Zea mays]
 gi|413920745|gb|AFW60677.1| vignain [Zea mays]
          Length = 363

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 173/342 (50%), Gaps = 39/342 (11%)

Query: 36  TDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ 95
           T GGDE +                +  +  ++ + Y    E  HRF +FKAN     R  
Sbjct: 47  TTGGDEAMMMA------------RYKKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSN 94

Query: 96  KLDPSA-THGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN-------DLPAD 147
                    G  QF+DLT  EF   Y GLR+   +P  A Q P   +        D    
Sbjct: 95  AGGKKKYVLGTNQFADLTSKEFAAMYTGLRKPAAVPSGAKQIPAAGSKYQNFTRLDDDVQ 154

Query: 148 FDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEE 207
            DWR++GAV PVK+QG CG CW+FS  GA+EG   + TG LVSLSEQQ++DCD E D  +
Sbjct: 155 VDWRQQGAVTPVKNQGQCGCCWAFSAVGAMEGLIMITTGNLVSLSEQQILDCD-ESDGNQ 213

Query: 208 PGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVV 267
                 GCNGG M++AF+Y +  GG+  E+ YPY+       C+    + AA+++ F  +
Sbjct: 214 ------GCNGGYMDNAFQYVINNGGVTTEDAYPYSAVQ--GTCQ--NVQPAATISGFQDL 263

Query: 268 SLDEDQIAANLVKNGPLAVAIN--AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYA 325
              ++   AN V N P++V ++  +   Q Y GG+     C   ++H V  +GYG+    
Sbjct: 264 PSGDENALANAVANQPVSVGVDGGSSPFQFYQGGIYDGDGCGTDMNHAVTAIGYGA---- 319

Query: 326 PIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
               +   YWI+KNSWG  WGENG+ ++  G   CG+ +M S
Sbjct: 320 --DDQGTQYWILKNSWGTGWGENGFMQLQMGVGACGISTMAS 359


>gi|354507493|ref|XP_003515790.1| PREDICTED: cathepsin L1-like [Cricetulus griseus]
 gi|344259154|gb|EGW15258.1| Cathepsin L1 [Cricetulus griseus]
          Length = 333

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 169/325 (52%), Gaps = 25/325 (7%)

Query: 51  NDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ--- 107
           N    A+ H   +K  + + Y + EE + R  +++ N++    H        HG T    
Sbjct: 22  NQTFNAQWH--KWKSTYRRLYGTNEE-EWRRAVWEKNMKMIELHNGEYSEGKHGYTMEMN 78

Query: 108 -FSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCG 166
            F D+T  EFR+   G + +        Q P++    LP   DWREKG V PVK+QG CG
Sbjct: 79  AFGDMTNEEFRQLVNGYKHQKHRKGKVFQEPLML--QLPKSVDWREKGCVTPVKNQGQCG 136

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           SCW+FS  GALEG   L TG LVSLSEQ LVDC            + GCNGGLM+ AF+Y
Sbjct: 137 SCWAFSACGALEGQMCLKTGVLVSLSEQNLVDCSQ-------AEGNQGCNGGLMDFAFQY 189

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAV 286
            L   GL  EE YPY   D    CK+     AA+   +  +   E  +   +   GP+A+
Sbjct: 190 VLNNKGLDSEESYPYEAKDG--TCKYKPEFAAANDTGYVDIPQLEKALMKAVATVGPIAI 247

Query: 287 AINAVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGE 343
           AI+A +   Q Y  G+   P   S+ LDHGVL+VGYG  G       +K YWI+KNSWG 
Sbjct: 248 AIDASHPSFQFYSSGIYYEPNCSSKELDHGVLVVGYGFEG---TDSNKKKYWIVKNSWGS 304

Query: 344 SWGENGYYKICRGRNV-CGVDSMVS 367
           SWG  G++ I + +N  CGV +  S
Sbjct: 305 SWGMGGFFHIAKDKNNHCGVATAAS 329


>gi|417399160|gb|JAA46608.1| Putative pro-cathepsin h [Desmodus rotundus]
          Length = 336

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/318 (39%), Positives = 171/318 (53%), Gaps = 31/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  + ++  K Y S EE+ HR   F +N R+   H   + +   GI  FSD+T AEF+R
Sbjct: 35  HFKSWMEQHQKTY-SAEEYRHRLQTFASNQRKIKEHNARNHTFKMGINPFSDMTFAEFKR 93

Query: 119 TYLGLRRKLRLPKD--ADQAPILPTN-DLPADFDWREKGA-VGPVKDQGSCGSCWSFSTT 174
            YL        P++  A ++  L  +   P   DWR+KG  V PVK+QG CGSCW+FSTT
Sbjct: 94  RYL-----WSEPQNCSATKSNYLRGHGPYPTSVDWRKKGRFVSPVKNQGGCGSCWTFSTT 148

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  + TGK++SLSEQQLVDC    +       + GC GGL + AFEY     G+M
Sbjct: 149 GALESAIAIKTGKMLSLSEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIM 201

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G D    C+F   K  A V + + ++L DE  +   +    P++ A      
Sbjct: 202 EEDSYPYEGKDSN--CRFQPEKAIAFVKDVANITLNDEAAMVEAVALYNPVSFAFEVTSD 259

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  G+     C +   +++H VL VGYG           KPYWI+KNSWG  WG NG
Sbjct: 260 FMLYRKGIYSSTSCHKTPDKVNHAVLAVGYGEQ-------NGKPYWIVKNSWGPYWGMNG 312

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG N+CG+ +  S
Sbjct: 313 YFLIERGTNMCGLAACAS 330


>gi|2804266|dbj|BAA24444.1| cysteine proteinase [Sitophilus zeamais]
          Length = 331

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/324 (40%), Positives = 177/324 (54%), Gaps = 30/324 (9%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA----THGITQFSDL 111
            +  +S FK + +K Y S+ E   R  IF  N  + A+H KL          G+ +++D+
Sbjct: 23  VQEQWSSFKMQHSKNYDSETEERFRMKIFMENDHKVAKHSKLFSQGFVKFKLGLNKYADM 82

Query: 112 TPAEFRRTYLGLRR-KLRLPKDADQAP----ILPTN-DLPADFDWREKGAVGPVKDQGSC 165
              EF  T  G  + K  + K +D       I P N  LP   DWR+KGAV  VKDQG C
Sbjct: 83  LHHEFVSTLNGFNKTKNNILKGSDLNDAVRFISPANVKLPDTVDWRDKGAVTKVKDQGHC 142

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           GSCWSFS +G+LEG +F  TGKLVSLSEQ LVDC            ++GCNGGLM++AF 
Sbjct: 143 GSCWSFSGSGSLEGQHFRKTGKLVSLSEQNLVDCSGRYG-------NTGCNGGLMDNAFR 195

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPL 284
           Y    GG+  E+ YPY   D    C +      A+   F  +   +ED + A +   GP+
Sbjct: 196 YIKDNGGIDTEQSYPYLAEDE--KCHYKTQNSGATDKGFVDIEEGNEDDLKAAVATVGPV 253

Query: 285 AVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           ++AI+A Y   Q Y  GV S P   S+ LDHGVL+VGYG++         + YW++KNSW
Sbjct: 254 SIAIDASYETFQLYSDGVYSDPECSSQELDHGVLVVGYGTSDDG------QDYWLVKNSW 307

Query: 342 GESWGENGYYKICRGR-NVCGVDS 364
             S G NGY K+ R + N+CGV S
Sbjct: 308 RPSCGLNGYIKMARNQDNMCGVAS 331


>gi|402770505|gb|AFQ98387.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 166/320 (51%), Gaps = 28/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K Y S  E   RF IF  N     +  A++ K   S   G+ QF DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF R + G  R  R    +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HRGTRKTGGSTFLPPANVNDSSLPKAVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL  G+LVSLSEQ LVDC            ++GC GGLM  AF+Y     G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C+F K  + A+   +  + +  E  +   +   GP++VAI+A 
Sbjct: 198 IDTEKSYPYEAVD--GECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDAS 255

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV   P   S  LDHGVL+VGYG  G        K YW++KNSW ESWG+ 
Sbjct: 256 HSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQ 308

Query: 349 GYYKICR-GRNVCGVDSMVS 367
           GY  + R   N CG+ S  S
Sbjct: 309 GYILMSRDNNNQCGIASQAS 328


>gi|299507656|gb|ADJ21807.1| cathepsin L [Oplegnathus fasciatus]
          Length = 336

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 131/322 (40%), Positives = 174/322 (54%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           + H+ L+K    K Y  +EE   R  +++ NL++   H        H    G+  F D+T
Sbjct: 25  DEHWDLWKSWHTKKYHEKEE-GWRRMVWEKNLKKIELHNLEHSMGEHTYRLGMNHFGDMT 83

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+   G +RK    +    +  +  N L  P   DWR+ G V PVKDQG CGSCW+
Sbjct: 84  HEEFRQIMNGYKRKSE--RKFKGSLFMEPNFLEAPRSVDWRDNGYVTPVKDQGQCGSCWA 141

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTGA+EG +F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    
Sbjct: 142 FSTTGAMEGQHFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYIKDN 194

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
            GL  E+ YPY GTD    C +D    +A+   F  + S  E  +   +   GP++VAI+
Sbjct: 195 QGLDSEDSYPYLGTD-DQPCHYDPKYNSANDTGFIDIPSGKERALMKAVAAVGPVSVAID 253

Query: 290 AVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+     C S  LDHGVL+VGYG  G     +  K YWI+KNSW E WG
Sbjct: 254 AGHESFQFYQSGIYYEKECSSEELDHGVLVVGYGFEGE---DVDGKKYWIVKNSWSEKWG 310

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + GY  + + R N CG+ +  S
Sbjct: 311 DKGYIYMAKDRKNHCGIATAAS 332


>gi|281204231|gb|EFA78427.1| cysteine proteinase 3 [Polysphondylium pallidum PN500]
          Length = 329

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/330 (40%), Positives = 173/330 (52%), Gaps = 40/330 (12%)

Query: 54  LGAEHHFSLFKKKFNKAYASQE------EHDHRFTIFKANLRRAARHQKLDPSATHGITQ 107
           L AE H+   + +F      Q+      E   R++ FK NL    R   ++     G T 
Sbjct: 19  LFAEKHY---QNQFTNWMVVQDRQYDAYEFRTRYSAFKDNLDFIHRWNAVNKETELGATV 75

Query: 108 FSDLTPAEFRRTYLGLRRKLR----LPKDADQA--PILPTNDLPADFDWREKGAVGPVKD 161
           F+DLT  E+R  YLG+          P   DQ   P+  T       DWR  GAVG VKD
Sbjct: 76  FADLTNEEYRAVYLGMNVDASNFAAQPATLDQVYQPVRST------LDWRNNGAVGRVKD 129

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QG CGSCW+FSTTGA+EGA+ +ATG  VSLSEQQL+DC            + GC GGLM+
Sbjct: 130 QGQCGSCWAFSTTGAVEGAHQIATGNFVSLSEQQLMDCSRSYG-------NHGCQGGLMD 182

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN 281
           SA  Y +K GG+  EE YPY   D  + CK++ +   A ++ +S +    +   A  +  
Sbjct: 183 SAMSYIVKQGGINTEESYPYEMRD-SYTCKYNPANNGAKLSGYSNIKRGSEADLAAKLNI 241

Query: 282 GPLAVAINAVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIK 338
           GP+A+A++A +   Q Y  GV   P   S  L HGVL VGYG+ G          YWI+K
Sbjct: 242 GPVAIALDASHSSFQLYKSGVFYDPACSSTSLSHGVLAVGYGTEG-------SSAYWIVK 294

Query: 339 NSWGESWGENGYYKICRGRNV-CGVDSMVS 367
           NSWG  WG+ GY  I + RN  CGV +M S
Sbjct: 295 NSWGTRWGDAGYIWIAKDRNNHCGVATMSS 324


>gi|5777889|emb|CAB53515.1| cysteine protease [Solanum tuberosum]
          Length = 466

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/362 (36%), Positives = 193/362 (53%), Gaps = 41/362 (11%)

Query: 3   SKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSL 62
           S T+ + L+ +++FS +SS + +  +           DE   HH S  +D + A +   L
Sbjct: 5   SSTLTISLLLMLIFSTLSSASDMSIISY---------DETHIHHRS--DDEVSALYESWL 53

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEFRRTYL 121
            +    K+Y +  E D RF IFK NL+       + + S   G+T+F+DLT  E+R  YL
Sbjct: 54  IE--HGKSYNALGEKDKRFQIFKDNLKYIDEQNSVPNQSYKLGLTKFADLTNEEYRSIYL 111

Query: 122 GL-----RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           G      RRKL   K     P +  + LP   DWR+KG +  VKDQGSCGSCW+FS   A
Sbjct: 112 GTKSSGDRRKLSKNKSDRYLPKV-GDSLPESVDWRDKGVLVGVKDQGSCGSCWAFSAVAA 170

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +E  N + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+ +  GG+  E
Sbjct: 171 MESINAIVTGNLISLSEQELVDCDK--------SYNEGCDGGLMDYAFEFVINNGGIDTE 222

Query: 237 EDYPYTGTDRGHAC-KFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYM 293
           EDYPY   +R   C ++ K+     + ++  V ++ ++     V + P+++AI A    +
Sbjct: 223 EDYPY--KERNDVCDQYRKNAKVVKIDSYEDVPVNNEKALQKAVAHQPVSIAIEAGGRDL 280

Query: 294 QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           Q Y  G+     C   +DHGV+  GYGS            YWI++NSWG  WGE GY ++
Sbjct: 281 QHYKSGIFTGK-CGTAVDHGVVAAGYGSE-------NGMDYWIVRNSWGAKWGEKGYLRV 332

Query: 354 CR 355
            R
Sbjct: 333 QR 334


>gi|139947602|ref|NP_001077155.1| cathepsin L1 precursor [Bos taurus]
 gi|134025180|gb|AAI34742.1| CTSL1 protein [Bos taurus]
 gi|296484500|tpg|DAA26615.1| TPA: cathepsin L1 [Bos taurus]
          Length = 333

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 126/317 (39%), Positives = 168/317 (52%), Gaps = 23/317 (7%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPA 114
            + L+K    K Y   EE   R  ++K N++    H +      H  +     F D+T  
Sbjct: 28  QWKLWKAAHRKPYDLNEE-GWRKAVWKKNMKMIELHNQEYSQGKHSFSMAMNAFGDMTNE 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           EFR T  G +R+           I  +  +P   DWREKG V PVK+QG CGSCW+FS T
Sbjct: 87  EFRHTMNGFQRQKNKKGKEFHETIFAS--IPPSVDWREKGYVTPVKNQGKCGSCWAFSAT 144

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALEG  F  TGKLVSLSEQ LVDC     PE     + GC+GG +++AF+Y L  GGL 
Sbjct: 145 GALEGQMFQKTGKLVSLSEQNLVDCSQ---PE----GNRGCHGGFIDNAFQYVLDVGGLD 197

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VY 292
            EE YPYTG      C ++ +  AA+   F  +   E  +   +   GP++VA++A    
Sbjct: 198 SEESYPYTGLVG--TCLYNPNNSAANETGFVDLPKQEKALMKAVANLGPISVAVDAHNPS 255

Query: 293 MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Q Y  G+   P   S  +DH VL+VGYG  G       +  YW++KNSWGE WG NGY 
Sbjct: 256 FQFYKSGIYYEPNCSSESVDHAVLVVGYGFEG---ADSDDNKYWLVKNSWGEHWGMNGYI 312

Query: 352 KICRGRNV-CGVDSMVS 367
           K+ + RN  CG+ +M S
Sbjct: 313 KMAKDRNNHCGIATMAS 329


>gi|454101|gb|AAA82966.1| cathepsin H prepropeptide [Mus musculus]
          Length = 333

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/318 (37%), Positives = 172/318 (54%), Gaps = 31/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  + K+  K Y+S  E++HR  +F  N R+   H + + +    + QFSD++ AE + 
Sbjct: 32  HFKSWMKQHQKTYSS-VEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKH 90

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTT 174
            +L        P++        +  T   P+  DWR+KG  V PVK+QG+C SCW+FSTT
Sbjct: 91  KFLWSE-----PQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVKNQGACASCWTFSTT 145

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +A+GK++SL+EQQLVDC    +       + GC GGL + AFEY L   G+M
Sbjct: 146 GALESAVAIASGKMLSLAEQQLVDCAQAFN-------NHGCKGGLPSQAFEYILYNKGIM 198

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G D   +C+F+  K  A V N   ++L DE  +   +    P++ A      
Sbjct: 199 EEDSYPYIGKDS--SCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTED 256

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  GV     C +   +++H VL VGYG             YWI+KNSWG  WGENG
Sbjct: 257 FLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQN-------GLLYWIVKNSWGSQWGENG 309

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG+N+CG+ +  S
Sbjct: 310 YFLIERGKNMCGLAACAS 327


>gi|226477902|emb|CAX72658.1| Cathepsin L precursor [Schistosoma japonicum]
 gi|226488903|emb|CAX74801.1| Cathepsin L precursor [Schistosoma japonicum]
          Length = 372

 Score =  207 bits (528), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 141/357 (39%), Positives = 185/357 (51%), Gaps = 38/357 (10%)

Query: 28  VDQLIRQVTDGGDEILSHHESTNNDLL---GAEHHFSLFKKKFNKAYASQEEHDHRFTIF 84
           + QL +Q   G D I +   S N +LL   GA   F  FK  F +AY +  E   RF IF
Sbjct: 33  LSQLFKQKAVG-DGIFN---SENLELLSNIGAAWKF--FKINFKRAYGNVMEETKRFLIF 86

Query: 85  KANLRRAARHQKL--DPSATH--GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILP 140
             N  +   H +   +  AT+  G+  F+D T  E R+   G R   R+ K      I  
Sbjct: 87  GTNFIKMMEHNRAYQEGKATYKMGVNNFTDKTEYELRKL-RGYRSACRIAKPKGSTFISS 145

Query: 141 TN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 199
            +  LP   DWR  GAV PVK+QG CGSCW+FS+TGA+EG ++  T +LV+LSEQQL+DC
Sbjct: 146 EHAKLPDRVDWRRNGAVTPVKNQGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDC 205

Query: 200 DHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG--TDRGHACKFDKSKI 257
                       ++GC GGLM+ AF+Y     G+  E  YPY     D    C F+ + I
Sbjct: 206 SKSYG-------NNGCEGGLMDLAFQYVRDNEGIDSEISYPYISGDGDENVRCLFNSTNI 258

Query: 258 AASVANFSVVSLDEDQIAANLVKN-GPLAVAINA--VYMQTYIGGVSCPYIC---SRRLD 311
            A V  +  +   +++   N V   GP++VAINA       Y  G+     C   S  LD
Sbjct: 259 MAQVTGYINIHEGDERALMNAVATIGPVSVAINAGLSSFSMYKSGIYSDPECASASEDLD 318

Query: 312 HGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR-GRNVCGVDSMVS 367
           HGVLLVGYG           KPYW+IKNSWGE WG+ GY KI +  +N+CGV S  S
Sbjct: 319 HGVLLVGYGIE-------DGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCGVASAAS 368


>gi|38345906|emb|CAE04498.2| OSJNBb0059K02.8 [Oryza sativa Japonica Group]
          Length = 458

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/321 (38%), Positives = 175/321 (54%), Gaps = 27/321 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  +   A   ++ +K +  K+Y +  E + R+  F+ NLR    H     + 
Sbjct: 25  IVSYGERSEEE---ARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAG 81

Query: 102 TH----GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLGLR K R  +      +   N+ LP   DWR KGAV
Sbjct: 82  VHSFRLGLNRFADLTNEEYRDTYLGLRNKPRRERKVSDRYLAADNEALPESVDWRTKGAV 141

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             +KDQ   GSCW+FS   A+EG N + TG L+SLSEQ+LVDCD         S + GCN
Sbjct: 142 AEIKDQEVAGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCN 193

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAA 276
           GGLM+ AF++ +  GG+  E+DYPY G D         +K+  ++ ++  V+ + +    
Sbjct: 194 GGLMDYAFDFIINNGGIDTEDDYPYKGKDERCDVNRKNAKV-VTIDSYEDVTPNSETSLQ 252

Query: 277 NLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPY 334
             V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K Y
Sbjct: 253 KAVANQPVSVAIEAGGRAFQLYSSGIFTG-KCGTALDHGVAAVGYGTE-------NGKDY 304

Query: 335 WIIKNSWGESWGENGYYKICR 355
           WI++NSWG+SWGE+GY ++ R
Sbjct: 305 WIVRNSWGKSWGESGYVRMER 325


>gi|157093357|gb|ABV22333.1| cysteine protease 1 [Noctiluca scintillans]
          Length = 338

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 133/332 (40%), Positives = 171/332 (51%), Gaps = 41/332 (12%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           + + HE    D +     F+ FK K+ K Y    E   RF IFKAN+         + + 
Sbjct: 12  VAAGHEVPPPDYM---MMFNNFKTKYGKVYNGINEDAVRFGIFKANVDIIYATNARNLTF 68

Query: 102 THGITQFSDLTPAEFRRTYLGLRRKLR---LPK----DADQAPILPTNDLPADFDWREKG 154
             G+ +F+DLT  EF  +Y GL+       LP+    + + AP      L +  DW  +G
Sbjct: 69  ALGVNEFTDLTQEEFAASYTGLKPASLWSGLPRLSTHEYNGAP------LASSVDWTTQG 122

Query: 155 AVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSG 214
            V PVK+QG CGSCWSFSTTGALEGA  L+TG LVSLSEQQ  DCD         + DSG
Sbjct: 123 VVTPVKNQGQCGSCWSFSTTGALEGAWALSTGNLVSLSEQQFEDCD---------TTDSG 173

Query: 215 CNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIA---ASVANFSVVSLDE 271
           CNGG M++AF +  K   +  E  YPYT TD    C     ++      V  ++ VS D 
Sbjct: 174 CNGGWMDNAFSFA-KKNSICTEGSYPYTATD--GTCNLSGCQVGIPQGGVVGYTDVSTDS 230

Query: 272 DQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRL 329
           +Q   + V   P+++AI A     Q Y  GV     C  RLDHGVL VGYGS        
Sbjct: 231 EQAMMSAVAQQPVSIAIEADQYSFQLYSSGV-LTASCGTRLDHGVLAVGYGSE------- 282

Query: 330 KEKPYWIIKNSWGESWGENGYYKICRGRNVCG 361
               YW +KNSWG SWGE GY ++ RG+   G
Sbjct: 283 AGTDYWKVKNSWGSSWGEQGYVRLQRGKGGAG 314


>gi|312381833|gb|EFR27483.1| hypothetical protein AND_05794 [Anopheles darlingi]
          Length = 344

 Score =  207 bits (528), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 135/329 (41%), Positives = 177/329 (53%), Gaps = 36/329 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH-QKLDPSATH---GITQFSDLTPAE 115
           ++ FK +  K Y S+ E   R  I+  N  + A+H Q+ D         + +++DL   E
Sbjct: 27  WNAFKLQHRKKYDSESEERIRMKIYVQNKHKIAKHNQRYDLGQEKFRLRVNKYADLLHEE 86

Query: 116 FRRTYLGLRR------KL--RLPKDADQAPIL---PTN-DLPADFDWREKGAVGPVKDQG 163
           F  T  G  R      KL  R      + PI    P N D+P   DWREKGAV PVKDQG
Sbjct: 87  FVHTLNGFNRSAAAGSKLLGREQLMTIEEPITWIEPANVDVPTTIDWREKGAVTPVKDQG 146

Query: 164 SCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSA 223
            CGSCWSFS TGALEG +F  TGKLVSLSEQ LVDC  +         ++GCNGGLM++A
Sbjct: 147 HCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNA 199

Query: 224 FEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNG 282
           F+Y     G+  E+ YPY   D    C ++   I A+   F  +   DE  +   L   G
Sbjct: 200 FQYVKDNKGIDTEKAYPYEAID--DECHYNPKAIGATDKGFVDIPQGDEKALKKALATVG 257

Query: 283 PLAVAINAVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
           P++VAI+A +   Q Y  GV     C S +LDHGVL VGYG+          + YW++KN
Sbjct: 258 PVSVAIDASHESFQFYSEGVYYEPQCDSEQLDHGVLAVGYGTTEDG------EDYWLVKN 311

Query: 340 SWGESWGENGYYKICRGR-NVCGVDSMVS 367
           SWG +WG+ GY K+ R R N CG+ +  S
Sbjct: 312 SWGTTWGDQGYVKMARNRENHCGIATTAS 340


>gi|2582045|gb|AAB82449.1| lymphopain [Homo sapiens]
 gi|2582181|gb|AAB82457.1| lymphopain [Homo sapiens]
 gi|3033547|gb|AAC32181.1| cathepsin W [Homo sapiens]
          Length = 376

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 170/335 (50%), Gaps = 42/335 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD-PSATHGITQFSDLTPAEFRR 118
           F LF+ +FN++Y S EEH HR  IF  NL +A R Q+ D  +A  G+T FSDLT  EF +
Sbjct: 42  FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 119 TYLGLRRKLRLPKDADQAPIL--------PTNDLPADFDWRE-KGAVGPVKDQGSCGSCW 169
            Y G RR       A   P +        P   +P   DWR+  GA+ P+KDQ +C  CW
Sbjct: 102 LY-GYRRA------AGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNCCW 154

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           + +  G +E    ++    V +S  +L+DC         G C  GC+GG +  AF   L 
Sbjct: 155 AMAAAGNIETLWRISFWDFVDVSVHELLDC---------GRCGDGCHGGFVWDAFITVLN 205

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
             GL  E+DYP+ G  R H C   K +  A + +F ++  +E +IA  L   GP+ V IN
Sbjct: 206 NSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTIN 265

Query: 290 AVYMQTYIGGV--SCPYICSRRL-DHGVLLVGYG-------------SAGYAPIRLKEKP 333
              +Q Y  GV  + P  C  +L DH VLLVG+G             S+   P      P
Sbjct: 266 MKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTP 325

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           YWI+KNSWG  WGE GY+++ RG N CG+     T
Sbjct: 326 YWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360


>gi|259016196|sp|P56202.2|CATW_HUMAN RecName: Full=Cathepsin W; AltName: Full=Lymphopain; Flags:
           Precursor
          Length = 376

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/335 (37%), Positives = 170/335 (50%), Gaps = 42/335 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD-PSATHGITQFSDLTPAEFRR 118
           F LF+ +FN++Y S EEH HR  IF  NL +A R Q+ D  +A  G+T FSDLT  EF +
Sbjct: 42  FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 119 TYLGLRRKLRLPKDADQAPIL--------PTNDLPADFDWRE-KGAVGPVKDQGSCGSCW 169
            Y G RR       A   P +        P   +P   DWR+   A+ P+KDQ +C  CW
Sbjct: 102 LY-GYRRA------AGGVPSMGREIRSEEPEESVPFSCDWRKVASAISPIKDQKNCNCCW 154

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           + +  G +E    ++    V +S Q+L+DC         G C  GC+GG +  AF   L 
Sbjct: 155 AMAAAGNIETLWRISFWDFVDVSVQELLDC---------GRCGDGCHGGFVWDAFITVLN 205

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
             GL  E+DYP+ G  R H C   K +  A + +F ++  +E +IA  L   GP+ V IN
Sbjct: 206 NSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTIN 265

Query: 290 AVYMQTYIGGV--SCPYICSRRL-DHGVLLVGYG-------------SAGYAPIRLKEKP 333
              +Q Y  GV  + P  C  +L DH VLLVG+G             S+   P      P
Sbjct: 266 MKPLQLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTP 325

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           YWI+KNSWG  WGE GY+++ RG N CG+     T
Sbjct: 326 YWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360


>gi|121543825|gb|ABM55577.1| putative cathepsin L-like protease [Maconellicoccus hirsutus]
          Length = 341

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/332 (38%), Positives = 180/332 (54%), Gaps = 33/332 (9%)

Query: 51  NDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGIT 106
           NDL+  E  + LFK +F+KAY ++ E   R  +F  N  + ARH KL    + S    + 
Sbjct: 24  NDLIAEE--WELFKTQFSKAYNTEIEEKFRMKVFMDNKHKIARHNKLFQNGEVSYELEMN 81

Query: 107 QFSDLTPAEFRRTYLGLRRKLR--LPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQ 162
            F DL   EF +T  G R  LR     + D    +P  ++  P   DWR +GAV  VK+Q
Sbjct: 82  HFGDLLHHEFVKTVNGYRHSLRRVTGDEIDSVTFIPAYNVTVPDSVDWRTEGAVTEVKNQ 141

Query: 163 GSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNS 222
           G CGSCW+FSTTG+LEG +F  T +L SLSEQ L+DC  +         ++GC+GGLM++
Sbjct: 142 GQCGSCWAFSTTGSLEGQHFRNTKQLTSLSEQNLIDCSGKYG-------NNGCSGGLMDN 194

Query: 223 AFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKN 281
           AF Y     G+  E+ YPY G D    C++   +  A+   F  +   DE+++   +   
Sbjct: 195 AFAYIKSNKGIDTEQSYPYEGIDD--KCRYKPQESGATDKGFVDIPQGDEEKLKLAVATV 252

Query: 282 GPLAVAINAVY--MQTYIGGVSCPYIC---SRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           GP++VAI+A +   Q Y  GV     C      LDHGVL VGYG+          K YW+
Sbjct: 253 GPISVAIDASHQSFQFYKKGVYYDKGCGNGEEDLDHGVLAVGYGTE-------NGKDYWL 305

Query: 337 IKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           +KNSWG+ WG +GY K+ R + N CG+ +  S
Sbjct: 306 VKNSWGKRWGLDGYIKMARNKHNHCGIATSAS 337


>gi|374713651|gb|AEZ65083.1| cysteine protease [Carica papaya]
          Length = 467

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 138/380 (36%), Positives = 196/380 (51%), Gaps = 43/380 (11%)

Query: 1   MGSKTVVLFLVSLVVF---SAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAE 57
           MG     L L  L++F   SAV    +  D     +      DE+++ +E+         
Sbjct: 1   MGLHRSSLSLFLLMIFTASSAVDMSIVSYDQRHADKSSWRTDDEVMAMYEA--------- 51

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
                +  K  KAY +  E + RF IFK NLR    H   + +   G+ +F+DLT  E+R
Sbjct: 52  -----WLVKHGKAYNALGEKEKRFGIFKDNLRFIDEHNSQNLTYRLGLNRFADLTNEEYR 106

Query: 118 RTYLGL-----RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             YLG+     R   ++ + +D+      + LP   DWR++GAV  VKDQGSCGSCW+FS
Sbjct: 107 SMYLGVKPGATRVTRKVSRKSDRFAARVGDALPDFIDWRKEGAVVGVKDQGSCGSCWAFS 166

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           T  A+EG N + TG L+SLSEQ+LVDCD         S + GCNGGLM+ AFE+ +  GG
Sbjct: 167 TIAAVEGINQIVTGDLISLSEQELVDCDT--------SYNEGCNGGLMDYAFEFIINNGG 218

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA-- 290
           +  EEDYPY   D+    ++ K+    S+  +  V  +++      V   P++VAI A  
Sbjct: 219 IDSEEDYPYRAADQ-KCDQYRKNANVVSIDGYEDVPENDEAALKKAVAKQPVSVAIEAGG 277

Query: 291 VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
              Q Y  GV     C   LDHGV  VGYG+          + YWI+ NSWG++WGE+GY
Sbjct: 278 RAFQLYQSGVFTGK-CGTSLDHGVAAVGYGTE-------NGQDYWIVGNSWGKNWGEDGY 329

Query: 351 YKICRGRNVCGVDSMVSTVA 370
            ++   RN+ G  S    +A
Sbjct: 330 IRM--ERNLAGSSSGKCGIA 347


>gi|109112413|ref|XP_001106814.1| PREDICTED: cathepsin L2 isoform 3 [Macaca mulatta]
 gi|297271422|ref|XP_002800251.1| PREDICTED: cathepsin L2 [Macaca mulatta]
          Length = 334

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/315 (41%), Positives = 168/315 (53%), Gaps = 26/315 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRR 118
           +K    + Y + EE   R  +++ N++    H        HG T     F D+T  EFR+
Sbjct: 32  WKATHRRLYGASEEGWRR-AVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQ 90

Query: 119 TYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
                R +KLR  K   +   L   DLP   DWR+KG V PVK+Q  CGSCW+FS TGAL
Sbjct: 91  VMGCFRNQKLRKGKLFREPLFL---DLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGAL 147

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  F  TGKLVSLSEQ LVDC H   P+     + GCNGG MNSAF Y  + GGL  EE
Sbjct: 148 EGQMFRKTGKLVSLSEQNLVDCSH---PQG----NQGCNGGFMNSAFRYVKENGGLDSEE 200

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVY--MQ 294
            YPY   D    CK+      A+   F VV   +++     V   GP++VA++A +   Q
Sbjct: 201 SYPYVAMD--GICKYRSENSVANDTGFKVVPAGKEKALMKAVATVGPISVAMDAGHSSFQ 258

Query: 295 TYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y  G+   P   S+ LDHGVL+VGYG  G          YW++KNSWG  WG NGY KI
Sbjct: 259 FYKSGIYFEPDCSSKNLDHGVLVVGYGFEG---ANSDNNKYWLVKNSWGPEWGSNGYVKI 315

Query: 354 CRGR-NVCGVDSMVS 367
            + + N CG+ +  S
Sbjct: 316 AKDKDNHCGIATAAS 330


>gi|157278115|ref|NP_001098156.1| cathepsin L precursor [Oryzias latipes]
 gi|50251128|dbj|BAD27581.1| cathepsin L [Oryzias latipes]
          Length = 336

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 132/322 (40%), Positives = 175/322 (54%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           + H+ L+K   +K Y  +EE   R  +++ NLR+   H        H    G+  F D+T
Sbjct: 25  DQHWQLWKGWHSKNYHEKEEGWRRL-VWEKNLRKIELHNLEHSMGKHSYRLGMNHFGDMT 83

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EFR+   G +R  R  +    +  +  N L  P   DWR+KG V PVKDQG CGSCW+
Sbjct: 84  HEEFRQIMNGYKR--REQRKYSGSLFMEPNFLEAPRAVDWRDKGYVTPVKDQGQCGSCWA 141

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTGALEG  F  TGKLVSLSEQ LVDC     PE     + GCNGGLM+ AF+Y    
Sbjct: 142 FSTTGALEGQQFRKTGKLVSLSEQNLVDCSR---PE----GNEGCNGGLMDQAFQYVKDN 194

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
            GL  E+ YPY GTD    C+++    A +   F  + S  E  +   +   GP++VAI+
Sbjct: 195 QGLDSEDFYPYKGTD-DQPCQYNAQYSAVNDTGFVDIPSGKERALMKAVASVGPVSVAID 253

Query: 290 AVY--MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+     CS   LDHGVL+VGYG  G     +  K YWI+KNSW E WG
Sbjct: 254 AGHESFQFYQSGIYFEKECSSDELDHGVLVVGYGFEG---EDVDGKKYWIVKNSWSEKWG 310

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + G+  + + R N CG+ +  S
Sbjct: 311 DKGFIYMAKDRHNHCGIATAAS 332


>gi|56758090|gb|AAW27185.1| SJCHGC06231 protein [Schistosoma japonicum]
          Length = 372

 Score =  207 bits (527), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 141/357 (39%), Positives = 185/357 (51%), Gaps = 38/357 (10%)

Query: 28  VDQLIRQVTDGGDEILSHHESTNNDLL---GAEHHFSLFKKKFNKAYASQEEHDHRFTIF 84
           + QL +Q   G D I +   S N +LL   GA   F  FK  F +AY +  E   RF IF
Sbjct: 33  LSQLFKQKAVG-DGIFN---SENLELLSNIGAAWKF--FKINFKRAYGNVMEETKRFLIF 86

Query: 85  KANLRRAARHQKL--DPSATH--GITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILP 140
             N  +   H +   +  AT+  G+  F+D T  E R+   G R   R+ K      I  
Sbjct: 87  GTNFIKMMEHNRAYQEGKATYKMGVNNFTDKTEYELRKL-RGYRSACRIAKPKGSTFISS 145

Query: 141 TN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDC 199
            +  LP   DWR  GAV PVK+QG CGSCW+FS+TGA+EG ++  T +LV+LSEQQL+DC
Sbjct: 146 EHAKLPDRVDWRRNGAVTPVKNQGQCGSCWAFSSTGAIEGQHYRKTNRLVNLSEQQLIDC 205

Query: 200 DHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTG--TDRGHACKFDKSKI 257
                       ++GC GGLM+ AF+Y     G+  E  YPY     D    C F+ + I
Sbjct: 206 SKSYG-------NNGCEGGLMDLAFQYVRDNKGIDSEISYPYISGDGDENVRCLFNSTNI 258

Query: 258 AASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVY--MQTYIGGVSCPYIC---SRRLD 311
            A V  +  +   +++   N V   GP++VAINA       Y  G+     C   S  LD
Sbjct: 259 MAQVTGYINIHEGDERALMNAVATIGPVSVAINAGLPSFSMYKSGIYSDPECASASEDLD 318

Query: 312 HGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR-GRNVCGVDSMVS 367
           HGVLLVGYG           KPYW+IKNSWGE WG+ GY KI +  +N+CGV S  S
Sbjct: 319 HGVLLVGYGIE-------DGKPYWLIKNSWGEDWGDKGYVKILKDSKNMCGVASAAS 368


>gi|220983358|dbj|BAH11164.1| cysteine protease [Hordeum vulgare]
          Length = 462

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 123/308 (39%), Positives = 166/308 (53%), Gaps = 35/308 (11%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDL 111
           AEHH           Y    E + RF  F+ NLR   +H     +  H    G+ +F+DL
Sbjct: 47  AEHH---------STYNPIGEEERRFEAFRNNLRYIDQHNAAADAGVHSFRLGLNRFADL 97

Query: 112 TPAEFRRTYLGLRRKL-RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           T  E+R TYLG R K  R  K + +      ++LP   DWR+KGAVG VKDQG CGSCW+
Sbjct: 98  TNEEYRSTYLGARTKPDRERKLSARYQAADNDELPESVDWRKKGAVGAVKDQGGCGSCWA 157

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FS   A+EG N + TG ++ LSEQ+LVDCD         S + GCNGGLM+ AFE+ +  
Sbjct: 158 FSAIAAVEGINQIVTGDMIPLSEQELVDCDT--------SYNQGCNGGLMDYAFEFIINN 209

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
           GG+  EEDYPY   +R + C  +K      ++  +  V ++ ++     V N P++VAI 
Sbjct: 210 GGIDSEEDYPY--KERDNRCDANKKNAKVVTIDGYEDVPVNSEKSLQKAVANQPISVAIE 267

Query: 290 A--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
           A     Q Y  G+     C   LDHGV  VGYG+          K YW+++NSWG  WGE
Sbjct: 268 AGGRAFQLYKSGIFTG-TCGTALDHGVAAVGYGTE-------NGKDYWLVRNSWGSVWGE 319

Query: 348 NGYYKICR 355
           NGY ++ R
Sbjct: 320 NGYIRMER 327


>gi|34223513|gb|AAQ62999.1| oil palm polygalacturonase allergen PEST472 [Elaeis guineensis]
          Length = 525

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/312 (40%), Positives = 172/312 (55%), Gaps = 34/312 (10%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAEFRRTYL 121
           K  +A  +  E + RF IFK N+R    H     S       G+ +F+D+T  E+R  YL
Sbjct: 56  KHGRADNALGEKERRFEIFKDNVRFIDAHNAAADSGHRSFRLGLNRFADMTNEEYRTVYL 115

Query: 122 GLR-----RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           G R     R+ RL   +D+       +LP   DWR+KGAV  VKDQGSCGSCW+FST  A
Sbjct: 116 GTRPASHRRRARL--GSDRYRYNAGEELPESVDWRDKGAVTTVKDQGSCGSCWAFSTIAA 173

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +EG N + TG L+SLSEQ+LVDCD+          + GCNGGLM+ AFE+ +  GG+  E
Sbjct: 174 VEGINKIVTGDLISLSEQELVDCDN--------GQNQGCNGGLMDYAFEFIINNGGIDTE 225

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQ 294
           EDYPY   D G   ++ K+    S+  +  V +++++     V N P++VAI A     Q
Sbjct: 226 EDYPYKARD-GKCDQYRKNAKVVSIDGYEDVPVNDEKALQKAVANQPVSVAIEAGGREFQ 284

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y  G+     C   LDHGV+ VGYG+          K YWI++NSWG  WGE+GY ++ 
Sbjct: 285 LYHSGIFTGR-CGTDLDHGVVAVGYGTE-------NGKDYWIVRNSWGGDWGESGYIRME 336

Query: 355 RGRNV----CGV 362
           R  N     CG+
Sbjct: 337 RNVNASTGKCGI 348


>gi|340380715|ref|XP_003388867.1| PREDICTED: pro-cathepsin H-like [Amphimedon queenslandica]
          Length = 347

 Score =  207 bits (527), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/318 (38%), Positives = 172/318 (54%), Gaps = 27/318 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAAR-HQKLDPSATHGITQFSDLTPAEFRR 118
           F  +  K  K YA+ EE++ R  ++ AN     R ++   P+    + QF+DLT AEF+R
Sbjct: 43  FERWTIKHKKTYATAEEYNWRLRVYTANHYYVKRLNEGHGPATEFELNQFADLTFAEFKR 102

Query: 119 TYLGLRRK-LRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
            YL    +  R      Q P+   N + P   DWR++  + PV+DQGSCGSCW+FS T  
Sbjct: 103 IYLSSSSQHCRATTGNFQMPVKKNNVEDPVAIDWRKRNVITPVRDQGSCGSCWAFSATSC 162

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           L     L TG+L+SLS+QQL+DC    +       + GC GGL + AFEY    GG+  E
Sbjct: 163 LSAHLALKTGQLISLSKQQLLDCSRSFN-------NRGCKGGLPSQAFEYIRYNGGIESE 215

Query: 237 EDYPYTGTDRGHACKFDKSKIAAS---VANFSVVSLDEDQIAANLVKNGPLAVAINAVY- 292
            DYPY   DR   C F  S +AA+   V NF+  +  ED IA  L   GP+++ I++   
Sbjct: 216 RDYPY--KDREEKCHFKPSLVAATVTGVVNFTQGA--EDDIAVALANIGPVSIGIHSTKS 271

Query: 293 MQTYIGGVSCPYICS---RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
             TY  G+    +CS   R+++H VL+VGY            + YWI KNSWG +WG NG
Sbjct: 272 FATYKKGIYQGKLCSKNPRKINHAVLIVGYDQTASG------EKYWIGKNSWGTNWGMNG 325

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG N CG+ +  S
Sbjct: 326 YFWIRRGHNACGLATCAS 343


>gi|1134882|emb|CAA92583.1| cysteine protease [Pisum sativum]
          Length = 350

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 135/362 (37%), Positives = 187/362 (51%), Gaps = 35/362 (9%)

Query: 9   FLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKK 65
            L+ L   ++ ++G    D +  IR V+D  +++L         ++G   H   F+ F  
Sbjct: 6   LLIVLFCVASAAAGFSFHDSNP-IRMVSDVEEQLL--------QVIGESRHAVSFARFAN 56

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           ++ K Y S +E   RF IF  NL       K   S   G+  F+D T  EFR   LG  +
Sbjct: 57  RYGKRYDSVDEMKLRFKIFSENLELIRSSNKRRLSYKLGVNHFADWTWEEFRSHRLGAAQ 116

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
                   +    +   +LP + DWR++G V  VKDQGSCGSCW+FSTTGALE A   A 
Sbjct: 117 NCSATLKGNHK--ITDANLPDEKDWRKEGIVSGVKDQGSCGSCWTFSTTGALESAYAQAF 174

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           GK +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG++
Sbjct: 175 GKNISLSEQQLVDCAGAFN-------NFGCSGGLPSQAFEYIKYNGGLETEEAYPYTGSN 227

Query: 246 RGHACKFDKSKIAASVANFSVVSLD-EDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCP 303
               CKF    +A  V     ++L  ED++   +    P++VA   V+  + Y  GV   
Sbjct: 228 --GLCKFRSEHVAVKVLGSVNITLGAEDELKHAIAFARPVSVAFEVVHDFRLYKSGVYTS 285

Query: 304 YICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
             C      ++H VL VGYG            PYW+IKNSWG  WG++GY+K+  G+N+C
Sbjct: 286 TACGSTPMDVNHAVLAVGYGIE-------DGIPYWLIKNSWGGDWGDHGYFKMEMGKNMC 338

Query: 361 GV 362
           GV
Sbjct: 339 GV 340


>gi|195628596|gb|ACG36128.1| vignain precursor [Zea mays]
          Length = 362

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/341 (35%), Positives = 172/341 (50%), Gaps = 38/341 (11%)

Query: 36  TDGGDEILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ 95
           T GGDE +                +  +  ++ + Y    E  HRF +FKAN     R  
Sbjct: 47  TTGGDEAMMMA------------RYKKWMAQYRRKYKDDAEKAHRFQVFKANAEFIDRSN 94

Query: 96  KLDPSA-THGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPI------LPTNDLPADF 148
                    G  QF+DLT  EF   Y GLR+   +P  A Q P           D     
Sbjct: 95  AGGKKKYVLGTNQFADLTSKEFAAMYTGLRKPAAVPSGAKQIPAGFKYQNFTRLDDDVQV 154

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWR++GAV PVK+QG CG CW+FS  GA+EG   + TG LVSLSEQQ++DCD E D  + 
Sbjct: 155 DWRQQGAVTPVKNQGQCGCCWAFSAVGAMEGLIMITTGNLVSLSEQQILDCD-ESDGNQ- 212

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVS 268
                GCNGG M++AF+Y +  GG+  E+ YPY+       C+    + AA+++ F  + 
Sbjct: 213 -----GCNGGYMDNAFQYVVNNGGVTTEDAYPYSAVQ--GTCQ--NVQPAATISGFQDLP 263

Query: 269 LDEDQIAANLVKNGPLAVAIN--AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAP 326
             ++   AN V N P++V ++  +   Q Y GG+     C   ++H V  +GYG+     
Sbjct: 264 SGDENALANAVANQPVSVGVDGGSSPFQFYQGGIYDGDGCGTDMNHAVTAIGYGADD--- 320

Query: 327 IRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
              +   YWI+KNSWG  WGENG+ ++  G   CG+ +M S
Sbjct: 321 ---QGTQYWILKNSWGTGWGENGFMQLQMGVGACGISTMAS 358


>gi|146217394|gb|ABQ10739.1| cathepsin L [Penaeus monodon]
          Length = 341

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/324 (40%), Positives = 169/324 (52%), Gaps = 31/324 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPAE 115
           +  FK + +K Y S+ E   R  IF  N  + A H K      H     + ++ D+   E
Sbjct: 29  WEAFKLEHSKKYDSEVEESFRMKIFTENKHKIANHNKGFAQGHHTYKLSMNKYGDMLHHE 88

Query: 116 FRRTYLGLRRKLRLPKDADQAP-----ILPTND--LPADFDWREKGAVGPVKDQGSCGSC 168
           F  T  G R         ++A      I P +D  LP + DWR KGAV P+KDQG CGSC
Sbjct: 89  FVSTMNGFRGNHTGGYKNNRAYTGATFIEPDDDVQLPKNVDWRTKGAVTPIKDQGQCGSC 148

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           W+FS TGALEG  F  TG+LVSLSEQ LVDC  +         ++GCNGGLM++AFEY  
Sbjct: 149 WAFSATGALEGQTFRKTGQLVSLSEQNLVDCSRKFG-------NNGCNGGLMDNAFEYVK 201

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVA 287
           + GG+  EE YPY   D    C ++     A    F  V    E  +   +   GP++VA
Sbjct: 202 ENGGIDTEESYPYDAEDE--KCHYNPRAAGAEDKGFVDVREGSEHALKKAVATVGPVSVA 259

Query: 288 INAVY--MQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           I+A +   Q Y  GV     CS   LDHGVL+VGYG      I      YW++KNSWG +
Sbjct: 260 IDASHESFQFYSHGVYIEPECSPEMLDHGVLVVGYG------IDDDGTDYWLVKNSWGTT 313

Query: 345 WGENGYYKICRGR-NVCGVDSMVS 367
           WG+ GY K+ R R N CG+ S  S
Sbjct: 314 WGDQGYVKMARNRDNQCGIASSAS 337


>gi|410907221|ref|XP_003967090.1| PREDICTED: pro-cathepsin H-like [Takifugu rubripes]
          Length = 324

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 125/316 (39%), Positives = 172/316 (54%), Gaps = 34/316 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F  +    NKAY   ++ D R  +F  N RR  +H + + S    + Q+SD+T AEF
Sbjct: 24  EREFRSWMALHNKAYV--KDFDQRLQVFTENKRRIDKHNEGNHSFAMRLNQYSDMTFAEF 81

Query: 117 RRTYLGLRRKLRLPKD--ADQAPILPTND-LPADFDWREKGA-VGPVKDQGSCGSCWSFS 172
           R+ +L        P++  A +   + TN   P   DWR+KG  V PVK+QGSCGSCW+FS
Sbjct: 82  RKHFLWAE-----PQNCSATKGSYIQTNSPHPESIDWRKKGNYVTPVKNQGSCGSCWTFS 136

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTG LE    + +GKLV LSEQQLVDC  + +       + GCNGGL + AFEY     G
Sbjct: 137 TTGCLESVTAINSGKLVPLSEQQLVDCAQDFN-------NHGCNGGLPSQAFEYIKYNKG 189

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAV 291
           LM E DYPYT  +    C +     AA V N  ++ + DE ++   +    P++ A    
Sbjct: 190 LMTESDYPYTAFED--KCTYKPELAAAFVKNVVNITAYDEKEMEDAVATRNPVSFAFEVT 247

Query: 292 --YMQTYIGGVSCPYIC---SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
             +M  Y  GV     C   + +++H VL VGYGS           PYWI+KNSWG  WG
Sbjct: 248 PDFMH-YSSGVYSSSTCHTTTDKVNHAVLAVGYGSEN-------GTPYWIVKNSWGPGWG 299

Query: 347 ENGYYKICRGRNVCGV 362
           ++GY+ I RG+N+CG+
Sbjct: 300 QDGYFLIMRGKNMCGL 315


>gi|18390634|ref|NP_563764.1| cysteine proteinase-like protein [Arabidopsis thaliana]
 gi|8844131|gb|AAF80223.1|AC025290_12 Contains similarity to a cysteine endopeptidase 1 from Phaseolus
           vulgaris gb|U52970 and is a member of the papain
           cysteine protease family PF|00112 [Arabidopsis thaliana]
 gi|332189848|gb|AEE27969.1| cysteine proteinase-like protein [Arabidopsis thaliana]
          Length = 343

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 177/322 (54%), Gaps = 33/322 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F  + K  +K Y  ++E   RF I+++N++       L         +F+D+T +EF
Sbjct: 40  KQRFEKWLKTHSKLYGGRDEWMLRFGIYQSNVQLIDYINSLHLPFKLTDNRFADMTNSEF 99

Query: 117 RRTYLGLR-RKLRLPKDADQAPIL-PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           +  +LGL    LRL K   Q P+  P  ++P   DWR +GAV P+++QG CG CW+FS  
Sbjct: 100 KAHFLGLNTSSLRLHKK--QRPVCDPAGNVPDAVDWRTQGAVTPIRNQGKCGGCWAFSAV 157

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
            A+EG N + TG LVSLSEQQL+DCD        G+ + GC+GGLM +AFE+    GGL 
Sbjct: 158 AAIEGINKIKTGNLVSLSEQQLIDCD-------VGTYNKGCSGGLMETAFEFIKTNGGLA 210

Query: 235 REEDYPYTGTDRGHACKFDKSK-IAASVANFSVVSLDED--QIAANLVKNGPLAVAINA- 290
            E DYPYTG +    C  +KSK    ++  +  V+ +E   QIAA      P++V I+A 
Sbjct: 211 TETDYPYTGIE--GTCDQEKSKNKVVTIQGYQKVAQNEASLQIAA---AQQPVSVGIDAG 265

Query: 291 -VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
               Q Y  GV   Y C   L+HGV +VGYG  G       ++ YWI+KNSWG  WGE G
Sbjct: 266 GFIFQLYSSGVFTNY-CGTNLNHGVTVVGYGVEG-------DQKYWIVKNSWGTGWGEEG 317

Query: 350 YYKICRG----RNVCGVDSMVS 367
           Y ++ RG       CG+  M S
Sbjct: 318 YIRMERGVSEDTGKCGIAMMAS 339


>gi|195624522|gb|ACG34091.1| thiol protease aleurain precursor [Zea mays]
          Length = 360

 Score =  207 bits (526), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 136/346 (39%), Positives = 176/346 (50%), Gaps = 31/346 (8%)

Query: 32  IRQVTDGGDEILSHHESTNNDLLGAEH---HFSLFKKKFNKAYASQEEHDHRFTIFKANL 88
           IR VTD     L   EST    LG       F+ F  ++ K+Y S  E   RF IF  +L
Sbjct: 31  IRPVTDRAASAL---ESTVFAALGRTRDALRFARFAVRYGKSYESAAEVHKRFRIFSESL 87

Query: 89  RRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADF 148
           +      +   S   GI +F+D++  EFR T LG  +        +         LP   
Sbjct: 88  QLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLTGNHRMRAAAVALPETK 147

Query: 149 DWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEP 208
           DWRE G V PVK+QG CGSCW+FSTTGALE A   ATGK +SLSEQQL+DC    +    
Sbjct: 148 DWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLIDCGFAFN---- 203

Query: 209 GSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASV---ANFS 265
              + GCNGGL + AFEY    GGL  EE YPY G +    CKF    +   V    N +
Sbjct: 204 ---NFGCNGGLPSQAFEYIKYNGGLDTEESYPYQGVN--GICKFKNENVGFKVLDSVNIT 258

Query: 266 VVSLDEDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCPYICSRR---LDHGVLLVGYGS 321
           + + DE + A  LV+  P++VA   +   + Y  GV     C      ++H VL VGYG 
Sbjct: 259 LGAEDELKDAVGLVR--PVSVAFEVITGFRLYKSGVYTSDHCGTTPMDVNHAVLAVGYGV 316

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVS 367
                      PYW+IKNSWG  WG+ GY+K+  G+N+CGV +  S
Sbjct: 317 E-------DGVPYWLIKNSWGADWGDEGYFKMEMGKNMCGVATCAS 355


>gi|50657027|emb|CAH04631.1| cathepsin H [Suberites domuncula]
          Length = 335

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/311 (39%), Positives = 170/311 (54%), Gaps = 21/311 (6%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E +F  +++K  K Y+++EE   R  +F  N+     H K   S    + +++D+T  EF
Sbjct: 32  EDYFKEWQEKHGKVYSTEEESQSRLKVFMKNVIYIDNHNKQGHSYELEVNEYADMTLDEF 91

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           +  YL   +           P     D P   DWR KGAV PVK+QG CGSCW+FSTTG 
Sbjct: 92  KDQYLMEPQHCSATHSLKSDPP-KYRDPPKAIDWRSKGAVTPVKNQGQCGSCWTFSTTGC 150

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LE  +FL TG+LVSLSEQQLVDC    +       ++GCNGGL + AFEY    GGL  E
Sbjct: 151 LESHHFLKTGQLVSLSEQQLVDCAQAFN-------NNGCNGGLPSQAFEYIHYNGGLDSE 203

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAIN-AVYMQ 294
           E YPY   D    C F  S+++A+V+N  ++ S DE Q+   +   GP+++A + +   +
Sbjct: 204 ESYPYRAHDE--KCHFVPSEVSATVSNVVNITSKDEMQLYNAVGTVGPVSIAYDVSADFR 261

Query: 295 TYIGGVSCPYICS---RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            Y  GV     C      ++H VL VGY +          + YWI+KNSWG  +G NGY+
Sbjct: 262 FYKKGVYKSKECKTDPEHVNHAVLAVGYNTTESG------EDYWIVKNSWGTKFGINGYF 315

Query: 352 KICRGRNVCGV 362
            I RG N+CG+
Sbjct: 316 WIARGENMCGL 326


>gi|194352754|emb|CAQ00105.1| papain-like cysteine proteinase [Hordeum vulgare subsp. vulgare]
 gi|326513690|dbj|BAJ87864.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326514532|dbj|BAJ96253.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 463

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/322 (37%), Positives = 175/322 (54%), Gaps = 29/322 (9%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  ++      ++ +  +    Y +  E + RF  F+ NLR   +H     + 
Sbjct: 28  IVSYGERSEEEV---RRMYAEWMAEHGSTYNAIGEEERRFEAFRDNLRYIDQHNAAADAG 84

Query: 102 TH----GITQFSDLTPAEFRRTYLGLRRKL-RLPKDADQAPILPTNDLPADFDWREKGAV 156
            H    G+ +F+DLT  E+R TYLG R K  R  K + +      ++LP   DWR+KGAV
Sbjct: 85  VHSFRLGLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQAADNDELPESVDWRKKGAV 144

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
           G VKDQG CGSCW+FS   A+EG N + TG ++ LSEQ+LVDCD         S + GCN
Sbjct: 145 GAVKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT--------SYNQGCN 196

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIA 275
           GGLM+ AFE+ +  GG+  EEDYPY   +R + C  +K      ++  +  V ++ ++  
Sbjct: 197 GGLMDYAFEFIINNGGIDSEEDYPY--KERDNRCDANKKNAKVVTIDGYEDVPVNSEKSL 254

Query: 276 ANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKP 333
              V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+          K 
Sbjct: 255 QKAVANQPISVAIEAGGRAFQLYKSGIFTG-TCGTALDHGVAAVGYGTE-------NGKD 306

Query: 334 YWIIKNSWGESWGENGYYKICR 355
           YW+++NSWG  WGE+GY ++ R
Sbjct: 307 YWLVRNSWGSVWGEDGYIRMER 328


>gi|30387350|ref|NP_848429.1| cathepsin [Choristoneura fumiferana MNPV]
 gi|1168799|sp|P41715.1|CATV_NPVCF RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|332509|gb|AAA96732.1| cathepsin [Choristoneura fumiferana MNPV]
 gi|30270084|gb|AAP29900.1| cathepsin [Choristoneura fumiferana MNPV]
          Length = 324

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 112/321 (34%), Positives = 174/321 (54%), Gaps = 21/321 (6%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           D+L A ++F  F  KFNK+Y+S+ E   RF IF+ NL         D +A + I +F+DL
Sbjct: 20  DVLKAPNYFEDFLHKFNKSYSSESEKLRRFQIFRHNLEEIINKNHNDSTAQYEINKFADL 79

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           +  E    Y GL   L+     +   +  P +  P +FDWR    V  VK+QG CG+CW+
Sbjct: 80  SKDETISKYTGLSLPLQTQNFCEVVVLDRPPDKGPLEFDWRRLNKVTSVKNQGMCGACWA 139

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           F+T G+LE    +   + ++LSEQQL+DCD           D+GC+GGL+++AFE  +  
Sbjct: 140 FATLGSLESQFAIKHNQFINLSEQQLIDCDF---------VDAGCDGGLLHTAFEAVMNM 190

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAIN 289
           GG+  E DYPY   +    C+ + +K    V   +  +++ E+++   L   GP+ VAI+
Sbjct: 191 GGIQAESDYPYEANNGD--CRANAAKFVVKVKKCYRYITVFEEKLKDLLRSVGPIPVAID 248

Query: 290 AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           A  +  Y  G+   Y  +  L+H VLLVGY             P+WI+KN+WG  WGE G
Sbjct: 249 ASDIVNYKRGIM-KYCANHGLNHAVLLVGYAVENGV-------PFWILKNTWGADWGEQG 300

Query: 350 YYKICRGRNVCGVDSMVSTVA 370
           Y+++ +  N CG+ + + + A
Sbjct: 301 YFRVQQNINACGIQNELPSSA 321


>gi|13905172|gb|AAH06878.1| Cathepsin H [Mus musculus]
          Length = 333

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 120/318 (37%), Positives = 172/318 (54%), Gaps = 31/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  + K+  K Y+S  E++HR  +F  N R+   H + + +    + QFSD++ AE + 
Sbjct: 32  HFKSWMKQHQKTYSS-VEYNHRLQMFANNWRKIQAHNQRNHTFKMALNQFSDMSFAEIKH 90

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTT 174
            +L        P++        +  T   P+  DWR+KG  V PV +QG+CGSCW+FSTT
Sbjct: 91  KFLWSE-----PQNCSATKSNYLRGTGPYPSSMDWRKKGNVVSPVINQGACGSCWTFSTT 145

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +A+GK++SL+EQQLVDC    +       + GC GGL + AFEY L   G+M
Sbjct: 146 GALESAVAIASGKMLSLAEQQLVDCAQAFN-------NHGCKGGLPSQAFEYILYNKGIM 198

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G D   +C+F+  K  A V N   ++L DE  +   +    P++ A      
Sbjct: 199 EEDSYPYIGKDS--SCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTED 256

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  GV     C +   +++H VL VGYG             YWI+KNSWG  WGENG
Sbjct: 257 FLMYKSGVYSSKSCHKTPDKVNHAVLAVGYGEQ-------NGLLYWIVKNSWGSQWGENG 309

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG+N+CG+ +  S
Sbjct: 310 YFLIERGKNMCGLAACAS 327


>gi|294883322|ref|XP_002770704.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
 gi|239873993|gb|EER02713.1| cathepsin L, putative [Perkinsus marinus ATCC 50983]
          Length = 333

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 165/305 (54%), Gaps = 22/305 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F  F+ KF K Y S+EE   R  IF+ANL    +    D S   G+ + +DLT  EF
Sbjct: 25  ELAFMGFQHKFGKNYESKEEEVKRNAIFQANLHHIEQVNAKDLSYKLGVNEHADLTHEEF 84

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
               LG   K+   +D        T  LP   DWR K  + PVKDQGSCGSCW+FSTTGA
Sbjct: 85  AALKLG-TLKMSTRRDDKFVIEADTTQLPTSVDWRNKNVLTPVKDQGSCGSCWAFSTTGA 143

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           LE    +ATGKL+SLSEQQLVDC         G  ++GC GGLM+ A+EY +K+ GL +E
Sbjct: 144 LEAQYAIATGKLLSLSEQQLVDC-------SSGYGNNGCEGGLMDDAYEY-IKSAGLDQE 195

Query: 237 EDYPYTGTD---RGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV-- 291
             Y Y GTD   +G   K      A  V  F ++   E  +   L  + P++VA+ A   
Sbjct: 196 STYSYNGTDDVCQGSLAKRSDGIPAGEVTGFHMLDKTEQSLMKALA-DAPVSVAMYAADP 254

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
             + Y  GV     C+ +LDHGV+ VGYG+            Y+II+NSWG SWG+ GY+
Sbjct: 255 DFRFYKSGVYSSATCNGKLDHGVVAVGYGTE-------NGSDYFIIRNSWGSSWGQAGYF 307

Query: 352 KICRG 356
            + RG
Sbjct: 308 YLKRG 312


>gi|357474523|ref|XP_003607546.1| Cysteine proteinase [Medicago truncatula]
 gi|358347207|ref|XP_003637651.1| Cysteine proteinase [Medicago truncatula]
 gi|355503586|gb|AES84789.1| Cysteine proteinase [Medicago truncatula]
 gi|355508601|gb|AES89743.1| Cysteine proteinase [Medicago truncatula]
          Length = 345

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/329 (36%), Positives = 179/329 (54%), Gaps = 26/329 (7%)

Query: 46  HESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI 105
           H+  ++D+   +  F  + K+  + Y   +E + RF I++AN++          S     
Sbjct: 32  HKQKSSDVEAMKKRFDGWVKRHGRKYKHNDEREVRFGIYQANVQYIQCKNAQKNSYNLTD 91

Query: 106 TQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSC 165
            +F+DLT  EF+ TY+GL  +LR      +       DLP   DWR++GAV  + DQG C
Sbjct: 92  NKFADLTNEEFQSTYMGLSTRLRSHNTGFRYD--EHGDLPESKDWRKEGAVTEIMDQGQC 149

Query: 166 GSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFE 225
           G CW+F+   A+EG N + +GKL+SLSEQ+L+DCD +       S + GC GGLM +A+ 
Sbjct: 150 GGCWAFAAVAAVEGINKIKSGKLISLSEQELIDCDVK-------SGNQGCQGGLMETAYT 202

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDK-SKIAASVANFSVVSLDEDQIAANLVKNGPL 284
           + ++ GGL  E+DYPY G D    CK +K +  AAS++ +  V  D +        + P+
Sbjct: 203 FIIENGGLTTEQDYPYEGVD--GTCKMEKAAHYAASISGYEEVPADNEAKLKAAAAHQPV 260

Query: 285 AVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           +VAI+A     Q Y  GV    IC ++L+HGV +VGYG       +     YWI+KNSWG
Sbjct: 261 SVAIDAGGYSFQFYSEGVFSG-ICGKQLNHGVTVVGYG-------KETINKYWIVKNSWG 312

Query: 343 ESWGENGYYKICR----GRNVCGVDSMVS 367
             WGE+GY ++ R       +CG+    S
Sbjct: 313 ADWGESGYIRMKRDTLSKEGMCGIAMQAS 341


>gi|168063167|ref|XP_001783545.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664932|gb|EDQ51634.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/318 (38%), Positives = 171/318 (53%), Gaps = 35/318 (11%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
            F+ +  K  KAY   E+  HRF ++K NL    RH + + + + G+T+F+DLT  EFRR
Sbjct: 53  QFAAWAHKHGKAYHDAEQCLHRFAVWKDNLAYI-RHSETNRTYSLGLTKFADLTNEEFRR 111

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
            Y G R                 ++ P   DWR+ GAV  VKDQGSCGSCW+FS  G++E
Sbjct: 112 MYTGTRIDRSRRAKRRTGFRYADSEAPESVDWRKNGAVTSVKDQGSCGSCWAFSAVGSVE 171

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G N +  G+ VSLSEQ+LVDCD E         + GCNGGLM+ AF++ ++ GG+  E+D
Sbjct: 172 GINAIRNGEAVSLSEQELVDCDLE--------YNQGCNGGLMDYAFDFIIQNGGIDTEKD 223

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA------VY 292
           YPY G D G      K+    ++  +  V  ++++     V   P++VAI A      +Y
Sbjct: 224 YPYKGFD-GRCDNSKKNAHVVTIDGYEDVPENDEEALKKAVAGQPVSVAIEAGGRDFQLY 282

Query: 293 MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
            Q    G      C   LDHGVL VGYG+            YWI+KNSWGE WGE+GY +
Sbjct: 283 AQGVFSGE-----CGTDLDHGVLAVGYGTEDGV-------DYWIVKNSWGEYWGESGYLR 330

Query: 353 ICR-------GRNVCGVD 363
           + R       G  +CG++
Sbjct: 331 MKRNMKDSNDGPGLCGIN 348


>gi|29165304|gb|AAO65603.1| cathepsin L precursor [Hydra vulgaris]
          Length = 324

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 172/314 (54%), Gaps = 32/314 (10%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR--RTY 120
           +K   NK Y+   E   R+TI+K N RR   H          + QF D+T +EF+    Y
Sbjct: 30  WKMYHNKVYSHDGEETVRYTIWKDNERRIREHNLKGGDFILKMNQFGDMTNSEFKAFNGY 89

Query: 121 LGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           L         K  + +  L  N+   P   DWR +G V PVKDQG CGSCW+FSTTG+LE
Sbjct: 90  LS-------HKHVNGSTFLTPNNFVAPDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLE 142

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G +F  TGKLVSLSEQ LVDC            ++GC+GGLM++AF Y  +  G+  E  
Sbjct: 143 GQHFKKTGKLVSLSEQNLVDC-------STAYGNNGCDGGLMDNAFTYIKENKGIDSEAS 195

Query: 239 YPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY--MQT 295
           YPYT  D    C F KS +AA+   F  +   +E+++   +   GP++VAI+A +   Q 
Sbjct: 196 YPYTAEDG--KCVFKKSSVAATDTGFVDIPEGNENKLKEAVASVGPISVAIDASHESFQF 253

Query: 296 YIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y  GV + P   S  LDHGVL+VGYG+          K YW++KNSW  SWG+ GY K+ 
Sbjct: 254 YSSGVYNEPSCSSTELDHGVLVVGYGTE-------SGKDYWLVKNSWNTSWGDKGYIKMR 306

Query: 355 R-GRNVCGVDSMVS 367
           R  +N CG+ +  S
Sbjct: 307 RNAKNQCGIATKAS 320


>gi|13897890|gb|AAK48495.1|AF259983_1 putative cysteine protease [Ipomoea batatas]
          Length = 462

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/298 (42%), Positives = 164/298 (55%), Gaps = 28/298 (9%)

Query: 76  EHDHRFTIFKANLRRA-ARHQKLDPSATHGITQFSDLTPAEFRRTYLGL----RRKLRLP 130
           E D RF IFK NLR    ++ + D S   G+ +F+DLT  E+R TYLG     RR++   
Sbjct: 66  EKDKRFEIFKDNLRYIDEQNSRGDRSYKLGLNRFADLTNEEYRSTYLGAKTDARRRIAKT 125

Query: 131 KDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVS 190
           K   +        LP   DWREKGAV  VKDQGSCGSCW+FST  A+EG N + TG+L+S
Sbjct: 126 KSDRRYAPKAGGSLPDSIDWREKGAVAEVKDQGSCGSCWAFSTIAAVEGINQIVTGELIS 185

Query: 191 LSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHAC 250
           LSEQ+LVDCD         S + GCNGGLM+ AFE+ +K GG+  E DYPYTG   G   
Sbjct: 186 LSEQELVDCDT--------SYNEGCNGGLMDYAFEFIIKNGGIDTEADYPYTGR-YGRCD 236

Query: 251 KFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSR 308
           +  K+    S+  +  V+  ++      V   P++VAI A     Q Y  G+     C  
Sbjct: 237 QTRKNAKVVSIDGYEDVTPYDEAALKEAVAGQPVSVAIEAGGRDFQLYSSGIFTG-SCGT 295

Query: 309 RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG----RNVCGV 362
            LDHGV  VGYG+            YWI+KNSW  SWGE GY ++ R       +CG+
Sbjct: 296 DLDHGVTAVGYGTENGV-------DYWIVKNSWAASWGEKGYLRMQRNVKDKNGLCGI 346


>gi|37994576|gb|AAH60335.1| Unknown (protein for MGC:68554) [Xenopus laevis]
          Length = 335

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/320 (39%), Positives = 173/320 (54%), Gaps = 23/320 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           ++H+  +K    K YA +EE   R  +++ NL+    H        H    G+ QF D+T
Sbjct: 26  DNHWYSWKDWHKKTYAPKEE-GWRRVLWEKNLKMIEFHNLDHSLGKHSYRLGMNQFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EF++   G + +  +      AP     + P   DWR+KG V PVKDQG CGSCW+FS
Sbjct: 85  NEEFKQLMNGYKNQKMIRGSTFLAP--NNFEAPKSVDWRKKGYVTPVKDQGQCGSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
           TTGALEG ++  T KL+SLSEQ LVDC            + GCNGGLM+ AF+Y    GG
Sbjct: 143 TTGALEGQHYRKTSKLISLSEQNLVDCSR-------AQGNEGCNGGLMDQAFQYVKDNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPYT  D    C +D +  +A+   F  V S  E  +   +   GP++VAI+A 
Sbjct: 196 IDSEDSYPYTAKDD-QECHYDPNNNSANDTGFVDVQSGCEKDLMKAVASVGPVSVAIDAG 254

Query: 292 Y--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  G+   P   S  LDHGVL+VGY   G+    +  K YWI+KNSW E WG+N
Sbjct: 255 HQSFQFYQSGIYYEPECSSEDLDHGVLVVGY---GFESEDVDGKKYWIVKNSWSEKWGDN 311

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  I + R N CG+ +  S
Sbjct: 312 GYINIAKDRHNHCGIATAAS 331


>gi|410990008|ref|XP_004001242.1| PREDICTED: cathepsin L1 isoform 1 [Felis catus]
          Length = 333

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/316 (39%), Positives = 171/316 (54%), Gaps = 23/316 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAE 115
           +S +K    K Y   +E   R  +++ N++   +H +      H  T     F D+T  E
Sbjct: 29  WSQWKATHGKLYGMNDEVWRR-AVWERNMKMIEQHNREHSQGKHTFTMAMNAFGDMTNEE 87

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           FR+   GL+ + R      QAP     ++P+  DWREKG V PVKDQG C  CW+FS TG
Sbjct: 88  FRQVMNGLKIQKRKKWKVFQAPFFV--EIPSSVDWREKGYVTPVKDQGYCLCCWAFSATG 145

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           ALEG  F  TGKLVSLSEQ LVDC            + G +GGL++ AF+Y    GGL  
Sbjct: 146 ALEGQMFRKTGKLVSLSEQNLVDCSQT-------EGNEGYSGGLIDDAFQYVKDNGGLDS 198

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--M 293
           EE YPY    +G +CK+      A+V ++  +   E+++   L   GP++ AI+A     
Sbjct: 199 EESYPYHA--QGDSCKYRPENSVANVTDYWDIPSKENELMITLAAVGPISAAIDASLDTF 256

Query: 294 QTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           + Y  G+   P   S  +DHGVL+VGYG+ G      + K YWIIKNSWG  WG +GY K
Sbjct: 257 RFYKEGIYYDPSCSSEDVDHGVLVVGYGADG---TETENKKYWIIKNSWGTDWGMDGYIK 313

Query: 353 ICRGR-NVCGVDSMVS 367
           + + R N CG+ S+ S
Sbjct: 314 MAKDRDNHCGIASLAS 329


>gi|75067394|sp|Q9GKL8.1|CATL1_CERAE RecName: Full=Cathepsin L1; AltName: Full=Major excreted protein;
           Short=MEP; Contains: RecName: Full=Cathepsin L1 heavy
           chain; Contains: RecName: Full=Cathepsin L1 light chain;
           Flags: Precursor
 gi|11493685|gb|AAG35605.1|AF201700_1 cysteine protease [Chlorocebus aethiops]
          Length = 333

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 167/319 (52%), Gaps = 23/319 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLT 112
           E  ++ +K   N+ Y   EE   R  +++ N++    H +      H  T     F D+T
Sbjct: 26  EAQWTKWKAMHNRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR+   G + +        Q P+    + P   DWREKG V PVK+QG CGSCW+FS
Sbjct: 85  SEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y    GG
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQ----GNEGCNGGLMDYAFQYVADNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  EE YPY  T+   +CK++     A+   F  +   E  +   +   GP++VAI+A +
Sbjct: 196 LDSEESYPYEATEE--SCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGH 253

Query: 293 --MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
                Y  G+     CS   +DHGVL+VGY   G+         YW++KNSWGE WG  G
Sbjct: 254 ESFMFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNSKYWLVKNSWGEEWGMGG 310

Query: 350 YYKICRG-RNVCGVDSMVS 367
           Y K+ +  RN CG+ S  S
Sbjct: 311 YIKMAKDRRNHCGIASAAS 329


>gi|109112057|ref|XP_001086247.1| PREDICTED: cathepsin L1-like isoform 5 [Macaca mulatta]
 gi|402897797|ref|XP_003911929.1| PREDICTED: cathepsin L1 [Papio anubis]
          Length = 333

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 167/319 (52%), Gaps = 23/319 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLT 112
           E  ++ +K   N+ Y   EE   R  +++ N++    H +      H  T     F D+T
Sbjct: 26  EAQWTKWKAMHNRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR+   G + +        Q P+    + P   DWREKG V PVK+QG CGSCW+FS
Sbjct: 85  SEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y    GG
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQ----GNEGCNGGLMDYAFQYVADNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  EE YPY  T+   +CK++     A+   F  +   E  +   +   GP++VAI+A +
Sbjct: 196 LDSEESYPYEATEE--SCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGH 253

Query: 293 --MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
                Y  G+     CS   +DHGVL+VGY   G+         YW++KNSWGE WG  G
Sbjct: 254 ESFMFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNSKYWLVKNSWGEEWGMGG 310

Query: 350 YYKICRG-RNVCGVDSMVS 367
           Y K+ +  RN CG+ S  S
Sbjct: 311 YIKMAKDRRNHCGIASAAS 329


>gi|6650705|gb|AAF21977.1|AF115280_1 thiolproteinase SmTP1 [Sarcocystis muris]
          Length = 394

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/307 (41%), Positives = 167/307 (54%), Gaps = 31/307 (10%)

Query: 57  EHHFS----LFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLT 112
           +HHF      F++  NK YA++EE   R+ IFK NL     H     S    + +F DLT
Sbjct: 82  DHHFQSQFYQFQRDHNKFYATEEERLKRYAIFKNNLTYIHNHNMQGYSYVLKMNKFGDLT 141

Query: 113 PAEFRRTYLGLRR-KLRLP-KDADQA-PILPTNDLPADFDWREKGAVGPVKDQGSCGSCW 169
             EFR+ YLG ++  LR P ++ D     +  ND+P   DWR++G V  VKDQG CGSCW
Sbjct: 142 LEEFRQRYLGYKKPDLRTPPREVDTTLESVEDNDIPTHVDWRQRGCVTSVKDQGDCGSCW 201

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FS TGA+EG     TGKLV+LS+QQLVDC            + GC+GG M  AFEY ++
Sbjct: 202 AFSATGAMEGVYCAKTGKLVNLSQQQLVDCSRFLG-------NQGCDGGRMEEAFEYVVE 254

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAI 288
            GG+   E+YPY   D    CK  +    A++  + SV    E  +   L    P++VAI
Sbjct: 255 NGGICSGENYPYMRKD--GVCKSSQCTSVATITGYRSVPRRSEKSMKTALALRSPVSVAI 312

Query: 289 --NAVYMQTYIGGV-SCPYICSRRLDHGVLLVGYG--SAGYAPIRLKEKPYWIIKNSWGE 343
             N    Q Y  G+   P  C   LDHGVLLVGY   +AG       +  YWI+KNSWG 
Sbjct: 313 QANQAAFQFYYDGIFDAP--CGTNLDHGVLLVGYSAETAG-------QGDYWIMKNSWGA 363

Query: 344 SWGENGY 350
           +WG+ GY
Sbjct: 364 AWGKGGY 370


>gi|328869030|gb|EGG17408.1| cysteine protease [Dictyostelium fasciculatum]
          Length = 379

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/340 (36%), Positives = 184/340 (54%), Gaps = 47/340 (13%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           +F K+Y S +    RF +FK N+                + QF+D+T  E+RR YLG R 
Sbjct: 45  RFEKSYESFD-FLQRFAVFKTNMDYVHEWNSKKLPTVLELNQFADITNQEYRRLYLGTRI 103

Query: 126 KLR----LPKDADQAPIL-------PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
             R     P   + +           ++   A  DWR KGAV P+K+QG CGSCWSFSTT
Sbjct: 104 NARHLLGTPGTHEMSNNFGKVFGDDDSDSSGATVDWRAKGAVSPIKNQGQCGSCWSFSTT 163

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           G++EGA++++TGK+V LSEQ LVDC            + GC GGLMN AF+Y +K  G+ 
Sbjct: 164 GSVEGAHYISTGKMVPLSEQNLVDCSGS-------EGNMGCQGGLMNLAFDYIIKNEGID 216

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVY- 292
            E+ YPY+  + G  C F+K+ + A+++++  ++  ++   A+ VKN GP++VAI+A + 
Sbjct: 217 TEDSYPYS-AETGKKCLFNKTNVGATISSYKNITSGDESNLADAVKNAGPVSVAIDASHN 275

Query: 293 -MQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPI-----------------RLKEKP 333
             Q Y  G+     CS   LDHGVL+VGYGS   + +                 R+ + P
Sbjct: 276 SFQLYSHGIYYEKDCSSVNLDHGVLVVGYGSGDPSSLANNVGGRSGPKMVVFNNRMVKTP 335

Query: 334 -----YWIIKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
                YWI+KNSWG +WG +G+  +   R N CG+ +  S
Sbjct: 336 SSNGDYWIVKNSWGSTWGSHGFIFMSMNRDNNCGIATSAS 375


>gi|256082975|ref|XP_002577726.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 1471

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/336 (38%), Positives = 175/336 (52%), Gaps = 42/336 (12%)

Query: 51  NDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKLDPSATHGIT 106
           +D++ A   +  FK +F +AY    E   RF IF AN  +   H    Q+   +   G+ 
Sbjct: 54  DDIIAA---WKFFKIQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQEGKVTYKMGVN 110

Query: 107 QFSDLTPAEFRR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVK 160
           +F+D T  E ++      T   +R K      ++         LP+  DWR +GAV  VK
Sbjct: 111 EFTDKTDYELKKLRGYKVTSGAIRHKGSTFIRSEHTK------LPSKVDWRREGAVTDVK 164

Query: 161 DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
           +QG CGSCW+FSTTGA+EG ++  T +LV+LSEQQLVDC            ++GC+GGLM
Sbjct: 165 NQGQCGSCWAFSTTGAIEGQHYRKTNRLVNLSEQQLVDCS-------KSYGNNGCSGGLM 217

Query: 221 NSAFEYTLKAGGLMREEDYPYTGTD--RGHACKFDKSKIAASVANF-SVVSLDEDQIAAN 277
           NSAFEY     G+  E  YPY   D    + C F+ S I A V  + ++   DE  +   
Sbjct: 218 NSAFEYVRDNEGIDSEISYPYVSGDGTENNRCLFNASNILAQVTGYVNIHEGDERALMDA 277

Query: 278 LVKNGPLAVAINA--VYMQTYIGGVSCPYICS---RRLDHGVLLVGYGSAGYAPIRLKEK 332
           +   GP++VAINA       Y  G+     C      LDHGVL+VGYG           +
Sbjct: 278 VATKGPVSVAINAGLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEEN-------GR 330

Query: 333 PYWIIKNSWGESWGENGYYKICRG-RNVCGVDSMVS 367
            YW+IKNSWGE WGE GY KI +G  N+CGV S  S
Sbjct: 331 SYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAAS 366


>gi|431897851|gb|ELK06685.1| Cathepsin L1 [Pteropus alecto]
          Length = 331

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/300 (39%), Positives = 162/300 (54%), Gaps = 22/300 (7%)

Query: 76  EHDHRFTIFKANLR----RAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPK 131
           E   R  +++ N++        H++   S T  I  F D+T  EFR+   GL+ +     
Sbjct: 42  EEGWRRAVWEKNMKMIELHNQEHRQGKHSFTMAINAFGDMTNEEFRKLMNGLQNQKHWKG 101

Query: 132 DADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSL 191
              Q P  P  ++P   DWR+KG V PVKDQG CGSCW+FS TGALEG  F  TGKL+SL
Sbjct: 102 KLFQEPPFP--EIPPSVDWRQKGYVTPVKDQGQCGSCWAFSATGALEGQMFRKTGKLISL 159

Query: 192 SEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACK 251
           SEQ LVDC            + GC+GGLM++AF+Y    GGL  EE YPY   D   +CK
Sbjct: 160 SEQNLVDCSQ-------SQGNEGCDGGLMDNAFQYVKDNGGLDSEESYPYLARDE--SCK 210

Query: 252 FDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSC-PYICSR 308
           +     AA+ + F  +   E  +   +   GP++V I+A Y   Q Y  G+   P   S 
Sbjct: 211 YKPEFSAANDSGFVDIHKQERSLMKAVASVGPISVGIDASYSSFQFYEKGIYYEPECSSE 270

Query: 309 RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNV-CGVDSMVS 367
            L+HGVL+VGY   G+      +  YWI+KNSWG +WG NGY  + + +N  CG+ +  S
Sbjct: 271 DLNHGVLVVGY---GFERAESNKNKYWIVKNSWGTNWGMNGYINMAKDQNNHCGIATAAS 327


>gi|298713906|emb|CBJ33775.1| Cathepsin-like proteinase [Ectocarpus siliculosus]
          Length = 462

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/350 (38%), Positives = 180/350 (51%), Gaps = 49/350 (14%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F  F  KF K+Y + +E   RF +FK NL+R            + +T ++DLT  EF
Sbjct: 123 ESLFQEFGIKFEKSYENDDEKAMRFEVFKRNLKRIDERNSKSLGVKYDVTMWTDLTHEEF 182

Query: 117 R--RTYLGL--------RRKLRLPKDAD----------QAPILP---TNDLPADFDWREK 153
           +  + Y  +        R K    KDA           + P L    T DLP +FDWR+ 
Sbjct: 183 KGYQNYGKISDEAKEVARSKAMSTKDASDMYESCQSCTRFPELEQYITGDLPTEFDWRDY 242

Query: 154 GAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDS 213
           GAV PVK+Q  CGSCW+FSTTG LEGA +L+   L SLSEQQLV CD         S + 
Sbjct: 243 GAVTPVKNQAYCGSCWTFSTTGCLEGAWYLSGHPLESLSEQQLVACDT--------SYNQ 294

Query: 214 GCNGGLMNSAFEYTLKAGGLMREEDYPYTGT-DRGH----ACK--FDKSKIAASVA---N 263
           GCNGG  + + +Y  K GG++ E  YPY      GH     C     +   AA++A    
Sbjct: 295 GCNGGWPSISMDYISKNGGIVPESIYPYRKVFMNGHLGDPVCSDVVKEGNYAATLAIEVA 354

Query: 264 FSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPYICS-RRLDHGVLLVGYGSA 322
            +  S+ E+ +A  L+ NGPL+VA++A+ M  Y  G+     C    +DH VL+VGYG  
Sbjct: 355 LAEDSMTEEAMARWLILNGPLSVALDAMGMDYYSEGIDMGEYCEPLEIDHAVLIVGYGEE 414

Query: 323 GYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDSMVSTVAAA 372
                      YWIIKNSW   WGE GYY++ RG N CG+   V+T+  A
Sbjct: 415 DGV-------KYWIIKNSWKYLWGERGYYRLVRGVNACGIADDVTTIIVA 457


>gi|224460525|gb|ACN43674.1| cathepsin L [Paralichthys olivaceus]
          Length = 334

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 176/324 (54%), Gaps = 29/324 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLT 112
           +H F  +K KF ++Y S  E D R  I+  N      H  +      +   G+T ++DL 
Sbjct: 23  DHDFHAWKLKFGRSYNSSSEEDKRMQIWLRNREIVMAHNAMADQGHSTYRLGMTFYADLE 82

Query: 113 PAEFRRTYLGL-RRKLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSC 168
             EF++T  G+        K    +  L  +   +LP   DWR+ G V PVK+QGSCGSC
Sbjct: 83  HEEFKQTVFGVCLGSFNASKPRGGSSFLKMHRFYNLPQTIDWRQWGFVTPVKNQGSCGSC 142

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           WSFS+TGALEG NF  TG+LVSLSEQ+LVDC            + GCNGG M++AF Y +
Sbjct: 143 WSFSSTGALEGQNFRKTGRLVSLSEQELVDCSGNYG-------NYGCNGGWMDNAFRYIV 195

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVA 287
             GG+  E+ YPY G  +   C+ +  +I A+    + + S +E  +   +   GP++VA
Sbjct: 196 NKGGIHTEDSYPYEG--QVGQCRANYGEIGATCTGYYDIPSGNEHALKEAVATFGPVSVA 253

Query: 288 INAV--YMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           I+A     Q Y  GV + PY     LDH VL+VGYG+          + YW++KNSWG +
Sbjct: 254 IHASDQSFQLYHSGVYNNPYCSGTALDHAVLIVGYGTE-------YGQDYWLVKNSWGPA 306

Query: 345 WGENGYYKICRGR-NVCGVDSMVS 367
           WG+ GY K+ R R N CG+ S  S
Sbjct: 307 WGDQGYIKMSRNRYNQCGIASAAS 330


>gi|15320768|ref|NP_203280.1| V-CATH [Epiphyas postvittana NPV]
 gi|37077652|sp|Q91GE3.1|CATV_NPVEP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|15213236|gb|AAK85675.1| V-CATH [Epiphyas postvittana NPV]
          Length = 323

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/321 (35%), Positives = 176/321 (54%), Gaps = 22/321 (6%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           D+L A ++F  F +++NK Y S+ E   R+ IF+ NL       + D +A + I +FSDL
Sbjct: 20  DILKAPNYFEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRND-TAVYKINKFSDL 78

Query: 112 TPAEFRRTYLGLRRKLRLPKDADQAPI-LPTNDLPADFDWREKGAVGPVKDQGSCGSCWS 170
           +  E    Y GL   L      +   +  P    P +FDWR    +  VK+QG CG+CW+
Sbjct: 79  SKDETIAKYTGLSLPLHTQNFCEVVVLDRPPGKGPLEFDWRRFNKITSVKNQGMCGACWA 138

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           F+T  +LE    +A  +L++LSEQQ++DCD         S D GC GGL+++AFE  +  
Sbjct: 139 FATLASLESQFAIAHDRLINLSEQQMIDCD---------SVDVGCEGGLLHTAFEAIISM 189

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAIN 289
           GG+  E DYPY  ++  + C+ D +K    V   +  +++ E+++   L   GP+ VAI+
Sbjct: 190 GGVQIENDYPYESSN--NYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAID 247

Query: 290 AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
           A  +  Y  G+   Y  +  L+H VLLVGYG            PYWI+KNSWG  WGE G
Sbjct: 248 ASDILNYEQGI-IKYCANNGLNHAVLLVGYGVEN-------NVPYWILKNSWGTDWGEQG 299

Query: 350 YYKICRGRNVCGVDSMVSTVA 370
           ++KI +  N CG+ + +++ A
Sbjct: 300 FFKIQQNVNACGIKNELASTA 320


>gi|355753449|gb|EHH57495.1| Cathepsin L1 [Macaca fascicularis]
          Length = 333

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/319 (39%), Positives = 167/319 (52%), Gaps = 23/319 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLT 112
           E  ++ +K   N+ Y   EE   R  +++ N++    H +      H  T     F D+T
Sbjct: 26  EAQWTKWKAMHNRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR+   G +   R P+       L   + P   DWREKG V PVK+QG CGSCW+FS
Sbjct: 85  SEEFRQVMNGFQN--RKPRKGKVFQELLFYEAPRSVDWREKGYVTPVKNQGQCGSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y    GG
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCSW---PQ----GNEGCNGGLMDYAFQYVADNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  EE YPY  T+   +CK++     A+   F  +   E  +   +   GP++VAI+A +
Sbjct: 196 LDSEESYPYEATEE--SCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGH 253

Query: 293 --MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
                Y  G+     CS   +DHGVL+VGY   G+         YW++KNSWGE WG  G
Sbjct: 254 ESFMFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNSKYWLVKNSWGEEWGMGG 310

Query: 350 YYKICRG-RNVCGVDSMVS 367
           Y K+ +  RN CG+ S  S
Sbjct: 311 YIKMAKDRRNHCGIASAAS 329


>gi|222629922|gb|EEE62054.1| hypothetical protein OsJ_16838 [Oryza sativa Japonica Group]
          Length = 336

 Score =  206 bits (525), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/314 (39%), Positives = 170/314 (54%), Gaps = 32/314 (10%)

Query: 67  FNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL--- 123
           + KAYAS EE   RF +FK NL       K   S   G+ +F+DLT  EF+ TYLGL   
Sbjct: 36  YRKAYASFEEKVRRFEVFKDNLNHIDDINKKVTSYWLGLNEFADLTHDEFKATYLGLTPP 95

Query: 124 ---RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
                      +  +   +   ++P + DWR+K AV  VK+QG CGSCW+FST  A+EG 
Sbjct: 96  PTRSNSKHYSSEEFRYGKMSNGEVPKEMDWRKKNAVTEVKNQGQCGSCWAFSTVAAVEGI 155

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           N + TG L SLSEQ+L+DC  +         ++GCNGGLM+ AF Y    GGL  EE YP
Sbjct: 156 NAIVTGNLTSLSEQELIDCSTD--------GNNGCNGGLMDYAFSYIASTGGLRTEEAYP 207

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIG 298
           Y   + G  C   K     +++ +  V  +++Q     + + P++VAI A   + Q Y G
Sbjct: 208 YA-MEEGD-CDEGKGAAVVTISGYEDVPANDEQALVKALAHQPVSVAIEASGRHFQFYSG 265

Query: 299 GV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR-- 355
           GV   P  C  +LDHGV  VGYG++       K + Y I+KNSWG  WGE GY ++ R  
Sbjct: 266 GVFDGP--CGEQLDHGVTAVGYGTS-------KGQDYIIVKNSWGPHWGEKGYIRMKRGT 316

Query: 356 --GRNVCGVDSMVS 367
             G  +CG++ M S
Sbjct: 317 GKGEGLCGINKMAS 330


>gi|17062058|gb|AAL34984.1|AF320565_1 cathepsine L-like cysteine protease [Rhodnius prolixus]
          Length = 316

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/315 (39%), Positives = 171/315 (54%), Gaps = 28/315 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRA----ARHQKLDPSATHGITQFSDLTPAEFRR 118
           FK    K Y +Q E   R  +F  N ++     A+++  + S    +    DL   EF+ 
Sbjct: 16  FKAMHGKNYRNQFEEIFRMKVFIDNKKKIDEHNAKYELGEASYKMKMNHLGDLMVHEFKA 75

Query: 119 TYLGLRRKLRLPKDADQAPILPTND-LPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
              G ++     ++      +P+N+ LP   DWR++GAV PVKDQG CGSCWSFS TG+L
Sbjct: 76  LMNGFKKTPNAERNG--KIYVPSNENLPKSVDWRQRGAVTPVKDQGHCGSCWSFSATGSL 133

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  FL TG+LVSLSEQ LVDC            +SGC GGLMN AF+Y     G+  E 
Sbjct: 134 EGQLFLKTGRLVSLSEQNLVDCSKTYG-------NSGCEGGLMNQAFQYVRDNKGIDTEA 186

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY--MQ 294
            YPY    R + C+F + K+  +   +  ++   E  + + +   GP++V I+A +   Q
Sbjct: 187 SYPYEA--RENNCRFKEDKVGGTDKGYVDILEASEKDLQSAVATVGPISVRIDASHESFQ 244

Query: 295 TYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y  GV     CS  +LDHGVL VGYG+          + YW++KNSWG SWGE+GY KI
Sbjct: 245 FYSEGVYKEQYCSPSQLDHGVLTVGYGTE-------NGQDYWLVKNSWGPSWGESGYIKI 297

Query: 354 CRG-RNVCGVDSMVS 367
            R  +N CG+ SM S
Sbjct: 298 ARNHKNHCGIASMAS 312


>gi|30141021|dbj|BAC75924.1| cysteine protease-2 [Helianthus annuus]
          Length = 362

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/318 (38%), Positives = 172/318 (54%), Gaps = 34/318 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           + ++++  +K   +  E   RF +FK+N+       K+D      + +F+D+T  EFR  
Sbjct: 37  WDMYERWRHKVATNHGEKLRRFNVFKSNVLHVHETNKMDKPYKLKLNKFADMTNHEFRSV 96

Query: 120 YLGLR-----RKLRLPKDADQAPILPT-NDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           Y G +     R L+  +   +  +      +P   DWR+KGAV PVKDQG CGSCW+FST
Sbjct: 97  YAGSKIHHHDRSLQGDRSGSKTFMYANVESVPTSVDWRKKGAVAPVKDQGQCGSCWAFST 156

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
             A+EG N + T +LVSLSEQ+LVDCD           + GCNGGLM+ AF++  K GGL
Sbjct: 157 VAAVEGINKIKTNELVSLSEQELVDCD--------TLENQGCNGGLMDLAFDFIKKTGGL 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANF---SVVSLDEDQIAANLVKNGPLAVAINA 290
            RE+ YPY   D     K D +K+ + V +      V  +++Q     V N P+AVAI+A
Sbjct: 209 TREDAYPYAAED----GKCDSNKMNSPVVSIDGHEDVPKNDEQSLMKAVANQPVAVAIDA 264

Query: 291 --VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
                Q Y  GV     C  +LDHGV  VGYG+       L    YWI++NSWG  WGE 
Sbjct: 265 GSSDFQFYSEGVFTGK-CGTQLDHGVAAVGYGTT------LDGTKYWIVRNSWGSEWGEK 317

Query: 349 GYYKICRG----RNVCGV 362
           GY ++ RG    R +CG+
Sbjct: 318 GYIRMERGISDKRGLCGI 335


>gi|359359213|gb|AEV41117.1| putative oryzain beta chain precursor [Oryza officinalis]
          Length = 465

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/320 (38%), Positives = 174/320 (54%), Gaps = 24/320 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL--DPSATHGITQFSDLTP 113
           A   + L+  +  ++Y +  EH+ RF +F  NLR A  H     D     G+ +F+DLT 
Sbjct: 50  ARAAYDLWLAENGRSYNALGEHERRFRVFWDNLRFADAHNARADDHGFRLGMNRFADLTN 109

Query: 114 AEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
            EFR T+LG +   R     ++       +LP   DWREKGAV PVK+QG CGSCW+FS 
Sbjct: 110 EEFRATFLGAKVVERSRAAGERYRHDGVEELPESVDWREKGAVAPVKNQGQCGSCWAFSA 169

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
              +E  N L TG++++LSEQ+LV+C            +SGCNGGLM+ AF++ +K GG+
Sbjct: 170 VSTVESINQLVTGEMITLSEQELVEC-------STNGQNSGCNGGLMDDAFDFIIKNGGI 222

Query: 234 MREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--V 291
             E+DYPY   D       + +K+  S+  F  V  ++++     V + P++VAI A   
Sbjct: 223 DTEDDYPYKAVDGKCDINRENAKV-VSIDGFEDVPQNDEKSLQKAVAHQPVSVAIEAGGR 281

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
             Q Y  GV     C   LDHGV+ VGYG+          K YWI++NSWG  WGE+GY 
Sbjct: 282 EFQLYHSGVFSGR-CGTSLDHGVVAVGYGTD-------NGKDYWIVRNSWGPKWGESGYV 333

Query: 352 KICRGRNV----CGVDSMVS 367
           ++ R  NV    CG+  M S
Sbjct: 334 RMERNINVTTGKCGIAMMAS 353


>gi|91992508|gb|ABE72970.1| cathepsin L [Aedes aegypti]
          Length = 339

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/324 (40%), Positives = 178/324 (54%), Gaps = 31/324 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH-QKLDPSATH---GITQFSDLTPAE 115
           ++ FK +  K Y S+ E   R  I+  N  + A+H Q+ D         + +++DL   E
Sbjct: 27  WNAFKLQHRKNYDSETEERIRLKIYVQNKHKIAKHNQRFDLGQEKYRLRVNKYADLLHEE 86

Query: 116 FRRTYLGLRR---KLRLPKDADQAP---ILPTN-DLPADFDWREKGAVGPVKDQGSCGSC 168
           F +T  G  R   K  L     + P   I P N ++P   DWR+KGAV PVKDQG CGSC
Sbjct: 87  FVQTVNGFNRTDSKKSLKGVRIEEPVTFIEPANVEVPTTVDWRKKGAVTPVKDQGHCGSC 146

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           WSFS TGALEG +F  TGKLVSLSEQ LVDC  +         ++GCNGG+M+ AF+Y  
Sbjct: 147 WSFSATGALEGQHFRKTGKLVSLSEQNLVDCSGKYG-------NNGCNGGMMDYAFQYIK 199

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVA 287
             GG+  E+ YPY   D    C F+   + A+   +  +   DE+ +   L   GP+++A
Sbjct: 200 DNGGIDTEKSYPYEAID--DTCHFNPKAVGATDKGYVDIPQGDEEALKKALATVGPVSIA 257

Query: 288 INAVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
           I+A +   Q Y  GV     C S  LDHGVL VGYG++       + + YW++KNSWG +
Sbjct: 258 IDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSE------EGEDYWLVKNSWGTT 311

Query: 345 WGENGYYKICRGR-NVCGVDSMVS 367
           WG+ GY K+ R   N CGV +  S
Sbjct: 312 WGDQGYVKMARNHDNHCGVATCAS 335


>gi|148908373|gb|ABR17300.1| unknown [Picea sitchensis]
          Length = 357

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 192/379 (50%), Gaps = 42/379 (11%)

Query: 3   SKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEH---H 59
           ++ + + L +L+  +   S     +  + I  VTD     + + ES+   +LG       
Sbjct: 2   ARILAIVLSTLLALAIAVSAARSFEETEYIDMVTDK----IQNLESSLFKILGTNPKSVQ 57

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F+ F  ++ K Y S  +  HRF  F  N+        ++   T  I +F+D+T  EF   
Sbjct: 58  FAEFALRYGKRYDSVRQLVHRFNAFVKNVELIESRNSMNLPYTLAINEFADITWEEFHGQ 117

Query: 120 YLGLRRKLRLPKD----ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YLG  +     K      D  P       P   DWRE+G V PVK+Q  CGSCW+FSTTG
Sbjct: 118 YLGASQNCSATKSNHKFTDAQP-------PTKKDWREEGIVSPVKNQAHCGSCWTFSTTG 170

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           ALE A   ATGK V LSEQQLVDC    +       + GC+GGL + AFEY    GGL  
Sbjct: 171 ALEAAYTQATGKTVILSEQQLVDCAGAFN-------NFGCSGGLPSQAFEYIKYNGGLDT 223

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVA---NFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           EE YPYT  D    C +D + +   VA   N S+ + D+ + A  LV+  P++VA   + 
Sbjct: 224 EEAYPYTAKD--GVCNYDVNNVGVKVADSVNISLGAEDKLKSAVGLVR--PVSVAFQVIQ 279

Query: 293 -MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
             + Y  GV     C +    ++H VL VGYG      +  +  P+WIIKNSWG+SWG  
Sbjct: 280 DFRFYKEGVFTSTTCGQGPMDVNHAVLAVGYG------VSEEGTPHWIIKNSWGKSWGVE 333

Query: 349 GYYKICRGRNVCGVDSMVS 367
           GY+K+  G+N+CGV +  S
Sbjct: 334 GYFKMEMGKNMCGVATCAS 352


>gi|14422331|emb|CAC41636.1| early leaf senescence abundant cysteine protease [Pisum sativum]
          Length = 350

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/362 (37%), Positives = 187/362 (51%), Gaps = 35/362 (9%)

Query: 9   FLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHH---FSLFKK 65
            L+ L   ++ ++G    D +  IR V+D  +++L         ++G   H   F+ F  
Sbjct: 6   LLIVLFCVASAAAGFSFHDSNP-IRMVSDVEEQLL--------QVIGESRHAVSFARFAN 56

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRR 125
           ++ K Y S +E   RF IF  N+       K   S   G+  F+D T  EFR   LG  +
Sbjct: 57  RYGKRYDSVDEMKLRFKIFSENIELIRSSNKRRLSYKLGVNHFADWTWEEFRSHRLGAAQ 116

Query: 126 KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLAT 185
                   +    +   +LP + DWR++G V  VKDQGSCGSCW+FSTTGALE A   A 
Sbjct: 117 NCSATLKGNHK--ITDANLPDEKDWRKEGIVSGVKDQGSCGSCWTFSTTGALESAYAQAF 174

Query: 186 GKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTD 245
           GK +SLSEQQLVDC    +       + GC+GGL + AFEY    GGL  EE YPYTG++
Sbjct: 175 GKNISLSEQQLVDCAGAFN-------NFGCSGGLPSQAFEYIKYNGGLETEEAYPYTGSN 227

Query: 246 RGHACKFDKSKIAASVANFSVVSLD-EDQIAANLVKNGPLAVAINAVY-MQTYIGGVSCP 303
               CKF    +A  V     ++L  ED++   +    P++VA   V+  + Y  GV   
Sbjct: 228 --GLCKFRSEHVAVKVLGSVNITLGAEDELKHAIAFARPVSVAFEVVHDFRLYKSGVYTS 285

Query: 304 YICSRR---LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVC 360
             C      ++H VL VGYG            PYW+IKNSWG  WG++GY+K+  G+N+C
Sbjct: 286 TACGSTPMDVNHAVLAVGYGIE-------DGIPYWLIKNSWGGDWGDHGYFKMEMGKNMC 338

Query: 361 GV 362
           GV
Sbjct: 339 GV 340


>gi|1185457|gb|AAA87848.1| cathepsin L, partial [Schistosoma japonicum]
          Length = 224

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 106/231 (45%), Positives = 146/231 (63%), Gaps = 20/231 (8%)

Query: 137 PILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQL 196
           P     D+P +FDWREKGAV  VK+QG CGSCW+FSTTG +E   F  TGKL+SLSEQQL
Sbjct: 3   PRREVGDIPNNFDWREKGAVTEVKNQGMCGSCWAFSTTGNIESQWFRKTGKLLSLSEQQL 62

Query: 197 VDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSK 256
           VDCD         S D GCNGGL ++A+E  ++ GGLM E++YPY    +   C      
Sbjct: 63  VDCD---------SLDDGCNGGLPSNAYESIIRMGGLMLEDNYPYDA--KNEKCHLKVGN 111

Query: 257 IAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGVSCPY--ICSRR-LDHG 313
           +AA + +   ++ DE ++A  L  +  ++V +NA+ +Q Y  G+S P+   CS+  LDH 
Sbjct: 112 VAAYINSSVNLTQDESELAIWLYHHSAISVGMNALLLQFYRHGISHPWWIFCSKYLLDHA 171

Query: 314 VLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRNVCGVDS 364
           VLLVGYG      +  K +P+WI+KNSWG  WGE GY+++ RG   CG+++
Sbjct: 172 VLLVGYG------VSEKNEPFWIVKNSWGVEWGEKGYFRMYRGDGTCGINT 216


>gi|330803818|ref|XP_003289899.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
 gi|325080010|gb|EGC33584.1| hypothetical protein DICPUDRAFT_154350 [Dictyostelium purpureum]
          Length = 326

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/312 (37%), Positives = 172/312 (55%), Gaps = 25/312 (8%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  K  K+Y + +E   R+++F+ N+   A+  +   +   G+   +DLT  EF++ 
Sbjct: 32  FQNWMVKHQKSY-TNDEFGSRYSVFQDNMDIVAKWNQKGSNTILGLNVMADLTNEEFKKL 90

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
           YLG +  +   K      ++  + LPA  DWR  GAV  VK+QG CG C++FSTTG++EG
Sbjct: 91  YLGTKANVTYKKKT----LVGVSGLPASVDWRANGAVTAVKNQGQCGGCYAFSTTGSVEG 146

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
            + + + +LV LSEQQ++DC            ++GC+GGLM ++FEY +  GGL  E  Y
Sbjct: 147 IHEITSQQLVPLSEQQILDCSGS-------EGNNGCDGGLMTNSFEYIIAVGGLDTEASY 199

Query: 240 PYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTYI 297
           PYTG      CKF+K  I A++  +  V    +      V   P++VAI+A     Q Y 
Sbjct: 200 PYTG--EVGKCKFNKKNIGATITGYKNVESGSESDLQTAVAAQPVSVAIDASQSSFQLYA 257

Query: 298 GGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG 356
            GV   P   S +LDHGVL VGYGS          + YWI+KNSWG  WGENG+  + R 
Sbjct: 258 SGVYYEPECSSTQLDHGVLAVGYGSQ-------SGQDYWIVKNSWGADWGENGFILMARN 310

Query: 357 R-NVCGVDSMVS 367
           + N CG+ +M S
Sbjct: 311 KDNNCGIATMAS 322


>gi|15593246|gb|AAL02220.1|AF410880_1 cysteine protease CP7 precursor [Frankliniella occidentalis]
          Length = 333

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 163/321 (50%), Gaps = 30/321 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA----THGITQFSDLTPA 114
           H+  FK    K YA+  E  +R  +FK N  R A+H     S       G  Q++D+   
Sbjct: 27  HWESFKATHAKTYANAAEEAYRAKVFKENAIRIAKHNDRFASGEVTFKVGYNQYADMHTH 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSF 171
           E      G R  L   K A       +ND        DWR KGAV P+KDQG CGSCWSF
Sbjct: 87  EVTEKLNGYRSGL---KQASAFVHTASNDSWPWSKKVDWRSKGAVTPIKDQGQCGSCWSF 143

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S TG+LEG  FL    LVSLSEQ LVDC  +   E       GCNGGLM+SAFEY    G
Sbjct: 144 SATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGNE-------GCNGGLMDSAFEYVKSYG 196

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINA 290
           G+  EE YPYT  D    C +  +  A     +  V +  E  +   + K GP++VAI+A
Sbjct: 197 GIDTEESYPYTAEDG--TCLYKAANNAGVNTGYKDVQAKSESALRDAVEKVGPVSVAIDA 254

Query: 291 V--YMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
                Q Y  G+     CS   LDHGVL VGYGS          K +WI+KNSWG SWGE
Sbjct: 255 SNWSFQMYTSGIYYEPACSSDSLDHGVLAVGYGS------EWPNKEFWIVKNSWGTSWGE 308

Query: 348 NGYYKICRG-RNVCGVDSMVS 367
            GY K+ R  +N CG+ +  S
Sbjct: 309 EGYIKMARNKKNNCGIATEAS 329


>gi|440910969|gb|ELR60703.1| Cathepsin H, partial [Bos grunniens mutus]
          Length = 329

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/319 (39%), Positives = 176/319 (55%), Gaps = 33/319 (10%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  +  +  K Y+S EE+ HR  +F +NLR    H   + +   G+ QFSD++  E +R
Sbjct: 28  HFQSWMVQHQKKYSS-EEYYHRLQVFASNLREINAHNARNHTFKMGLNQFSDMSFDELKR 86

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTT 174
            YL        P++        +  T   P   DWR+KG  V PVK+QGSCGSCW+FSTT
Sbjct: 87  KYL-----WSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVTPVKNQGSCGSCWTFSTT 141

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +ATGKL  L+EQQLVDC    +       + GC GGL + AFEY     G+M
Sbjct: 142 GALESAVAIATGKLPFLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYIRYNKGIM 194

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVA--INAV 291
            E+ YPY G D    CK+  SK  A V + + ++L DE+ +   +  + P++ A  + A 
Sbjct: 195 GEDTYPYRGQDGD--CKYQPSKAIAFVKDVANITLNDEEAMVEAVALHNPVSFAFEVTAD 252

Query: 292 YMQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +M  Y  G+     C +   +++H VL VGYG         K  PYWI+KNSWG +WG  
Sbjct: 253 FM-MYRKGIYSSTSCHKTPDKVNHAVLAVGYGEE-------KGIPYWIVKNSWGPNWGMK 304

Query: 349 GYYKICRGRNVCGVDSMVS 367
           GY+ I RG+N+CG+ +  S
Sbjct: 305 GYFLIERGKNMCGLAACAS 323


>gi|118119|sp|P13277.2|CYSP1_HOMAM RecName: Full=Digestive cysteine proteinase 1; Flags: Precursor
 gi|11051|emb|CAA45127.1| cysteine proteinase preproenzyme [Homarus americanus]
 gi|228243|prf||1801240A Cys protease 1
          Length = 322

 Score =  206 bits (524), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 176/322 (54%), Gaps = 33/322 (10%)

Query: 53  LLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRA----ARHQKLDPSATHGITQF 108
           L  A   +  FK KF + Y   EE  +R  +F  NL+       ++++ + +    I QF
Sbjct: 13  LAAANPSWEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQF 72

Query: 109 SDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTNDLP--ADFDWREKGAVGPVKDQGSCG 166
           SD+T  +F     G ++    P+ A  A    T+  P   + DWR KGAV PVKDQG CG
Sbjct: 73  SDMTNEKFNAVMKGYKKG---PRPA--AVFTSTDAAPESTEVDWRTKGAVTPVKDQGQCG 127

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGS-CDSGCNGGLMNSAFE 225
           SCW+FSTTG +EG +FL TG+LVSLSEQQLVDC         GS  + GCNGG +  A  
Sbjct: 128 SCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDC-------AGGSYYNQGCNGGWVERAIM 180

Query: 226 YTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPL 284
           Y    GG+  E  YPY   D  + C+F+ + I A+   +  ++   +       ++ GP+
Sbjct: 181 YVRDNGGVDTESSYPYEARD--NTCRFNSNTIGATCTGYVGIAQGSESALKTATRDIGPI 238

Query: 285 AVAINAVY--MQTYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSW 341
           +VAI+A +   Q+Y  GV   P   S +LDH VL VGYGS G        + +W++KNSW
Sbjct: 239 SVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGYGSEG-------GQDFWLVKNSW 291

Query: 342 GESWGENGYYKICRGR-NVCGV 362
             SWGE+GY K+ R R N CG+
Sbjct: 292 ATSWGESGYIKMARNRNNNCGI 313


>gi|170041165|ref|XP_001848344.1| cathepsin l [Culex quinquefasciatus]
 gi|167864709|gb|EDS28092.1| cathepsin l [Culex quinquefasciatus]
          Length = 340

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/332 (39%), Positives = 179/332 (53%), Gaps = 39/332 (11%)

Query: 60  FSLFKKKFN-------KAYASQEEHDHRFTIFKANLRRAARH-QKLDPSATH---GITQF 108
           F L K+++N       K Y S+ E   R  I+  N  + A+H Q+ +         + ++
Sbjct: 20  FELVKEEWNAYKLQHRKKYDSETEERLRLKIYVQNKHKIAKHNQRFEQGQEKFRLRVNKY 79

Query: 109 SDLTPAEFRRTYLGLRR-KLRLPK------DADQAPILPTN-DLPADFDWREKGAVGPVK 160
           +DL   EF +T  G  R   + P       D     I P N ++P   DWREKGAV PVK
Sbjct: 80  TDLLHEEFVQTLNGFNRTNAKKPMLKGVKIDEPVTYIEPANVEVPKTVDWREKGAVTPVK 139

Query: 161 DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
           DQG CGSCWSFS TGALEG +F  TGKLVSLSEQ LVDC  +         ++GCNGG+M
Sbjct: 140 DQGHCGSCWSFSATGALEGQHFRKTGKLVSLSEQNLVDCSTKYG-------NNGCNGGMM 192

Query: 221 NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLV 279
           + AF+Y    GG+  E+ YPY   D    C ++   + A+   F  +   DE  +   + 
Sbjct: 193 DFAFQYIKDNGGIDTEKAYPYEAID--DTCHYNPKAVGATDKGFVDIPQGDEKALMKAIA 250

Query: 280 KNGPLAVAINAVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
             GP++VAI+A +   Q Y  GV     C S  LDHGVL VGYG++       + + YW+
Sbjct: 251 TAGPVSVAIDASHESFQFYSEGVYYEPQCDSENLDHGVLAVGYGTSE------EGEDYWL 304

Query: 337 IKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           +KNSWG +WG+ GY K+ R R N CG+ +  S
Sbjct: 305 VKNSWGTTWGDQGYVKMARNRDNHCGIATAAS 336


>gi|380790141|gb|AFE66946.1| cathepsin L1 preproprotein [Macaca mulatta]
 gi|384939708|gb|AFI33459.1| cathepsin L1 preproprotein [Macaca mulatta]
          Length = 333

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 167/319 (52%), Gaps = 23/319 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLT 112
           E  ++ +K   N+ Y   EE   R  +++ N++    H +      H  T     F D+T
Sbjct: 26  EAQWTKWKAMHNRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR+   G + +        Q P+    + P   DWREKG V PVK+QG CGSCW+FS
Sbjct: 85  SEEFRQLMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y    GG
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQ----GNEGCNGGLMDYAFQYVADNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  EE YPY  T+   +CK++     A+   F  +   E  +   +   GP++VAI+A +
Sbjct: 196 LDSEESYPYEATEE--SCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGH 253

Query: 293 --MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
                Y  G+     CS   +DHGVL+VGY   G+         YW++KNSWGE WG  G
Sbjct: 254 ESFMFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNSKYWLVKNSWGEEWGMGG 310

Query: 350 YYKICRG-RNVCGVDSMVS 367
           Y K+ +  RN CG+ S  S
Sbjct: 311 YIKMAKDRRNHCGIASAAS 329


>gi|355567871|gb|EHH24212.1| Cathepsin L1 [Macaca mulatta]
          Length = 333

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 167/319 (52%), Gaps = 23/319 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLT 112
           E  ++ +K   N+ Y   EE   R  +++ N++    H +      H  T     F D+T
Sbjct: 26  EAQWTKWKAMHNRLYGMNEEGWRR-AVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
             EFR+   G + +        Q P+    + P   DWREKG V PVK+QG CGSCW+FS
Sbjct: 85  SEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFS 142

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TGALEG  F  TGKLVSLSEQ LVDC     P+     + GCNGGLM+ AF+Y    GG
Sbjct: 143 ATGALEGQMFRKTGKLVSLSEQNLVDCS---GPQ----GNEGCNGGLMDYAFQYVADNGG 195

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY 292
           L  EE YPY  T+   +CK++     A+   F  +   E  +   +   GP++VAI+A +
Sbjct: 196 LDSEEAYPYEATEE--SCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGH 253

Query: 293 --MQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
                Y  G+     CS   +DHGVL+VGY   G+         YW++KNSWGE WG  G
Sbjct: 254 ESFMFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNSKYWLVKNSWGEEWGMGG 310

Query: 350 YYKICRG-RNVCGVDSMVS 367
           Y K+ +  RN CG+ S  S
Sbjct: 311 YIKMAKDRRNHCGIASAAS 329


>gi|38147395|gb|AAR12010.1| cathepsin L-like proteinase [Triatoma infestans]
          Length = 328

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/316 (39%), Positives = 168/316 (53%), Gaps = 31/316 (9%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQFSDLTPAEFRR 118
           FK +F K+Y +  E   R  ++K N R+   H K     + S    +  F DL   EF+ 
Sbjct: 29  FKAQFGKSYKNSFEELFRMNVYKENQRKIDEHNKRYENGEVSYKLKMNHFGDLMQHEFK- 87

Query: 119 TYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
               L +  R  K  +   +       LPA  DWR+KGAV PVKD G CGSCW+FS+TG+
Sbjct: 88  ---ALNKLKRSAKQQNSGEVFRATGGKLPAKVDWRQKGAVTPVKDPGQCGSCWAFSSTGS 144

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           L G  FL   KLVSLSEQQLVDC            + GC+GG+M  AF+Y    GG+  E
Sbjct: 145 LGGQLFLKNKKLVSLSEQQLVDCSGNYG-------NDGCDGGIMVQAFQYIKGNGGIDTE 197

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINA--VYM 293
             YPY   D    C++    +A +   +  +   DE+ +   + + GP++VAI+A  +  
Sbjct: 198 GSYPYEAED--DKCRYKTKSVAGTDKGYVDIAQGDENALKEAVAEIGPISVAIDAGNLSF 255

Query: 294 QTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYK 352
           Q Y  G+   P+  +  LDHGVL+VGYG+          + YW++KNSWG SWGENGY K
Sbjct: 256 QFYSEGIYDEPFCSNTELDHGVLVVGYGTE-------NGQDYWLVKNSWGPSWGENGYIK 308

Query: 353 ICRGRNV-CGVDSMVS 367
           I R  N  CG+ SM S
Sbjct: 309 IARNHNNHCGIASMAS 324


>gi|28192373|gb|AAK07730.1| CPR1-like cysteine proteinase [Nicotiana tabacum]
          Length = 374

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/307 (39%), Positives = 170/307 (55%), Gaps = 26/307 (8%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAE 115
           ++ + ++  +  +AY +  E + RF IFK NLR    H    + +   G+ QF+DLT  E
Sbjct: 47  KNRYEMWLAEHGRAYNALGEKEKRFEIFKDNLRFIEEHNNSGNRTYKVGLNQFADLTNEE 106

Query: 116 FRRTYLGL----RRKLRLPKDADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWS 170
           +R  YLG     RR+    K+  Q      N+L P   DWR++GAV P+K+QGSCGSCW+
Sbjct: 107 YRTMYLGTKSDARRRFVKSKNPSQRYASRPNELMPHSVDWRKRGAVAPIKNQGSCGSCWA 166

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FST  A+ G N + TG++++LSEQ+LVDCD           +SGCNGGLM+ AFE+ +  
Sbjct: 167 FSTVAAVGGINQIVTGEMITLSEQELVDCDR--------VQNSGCNGGLMDYAFEFIISN 218

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA 290
           GG+  E+ YPY G + G      K+    S+  +  V  +E  +    V + P+ VAI A
Sbjct: 219 GGMDTEKHYPYRGVE-GRCDPVRKNYKVVSIDGYEDVPRNERALQK-AVAHQPVCVAIEA 276

Query: 291 V--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
                Q Y  GV     C   +DHGV++VGYGS            YWI++NSWG  WGEN
Sbjct: 277 SGRAFQLYSSGVFTGE-CGEEVDHGVVVVGYGSEDGV-------DYWIVRNSWGTKWGEN 328

Query: 349 GYYKICR 355
           GY K+ R
Sbjct: 329 GYVKMER 335


>gi|18138384|ref|NP_542680.1| cathepsin [Helicoverpa zea SNPV]
 gi|209401110|ref|YP_002273979.1| viral cathepsin-like protein [Helicoverpa armigera NPV NNg1]
 gi|37077430|sp|Q8V5U0.1|CATV_NPVHZ RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|18028766|gb|AAL56202.1|AF334030_127 ORF57 [Helicoverpa zea SNPV]
 gi|209364362|dbj|BAG74621.1| viral cathepsin-like protein [Helicoverpa armigera NPV NNg1]
          Length = 367

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/329 (36%), Positives = 172/329 (52%), Gaps = 39/329 (11%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQK------------LDP 99
           +L  +E +F  F +++NK+Y   +E+ +R+ +FK NL +     +            L  
Sbjct: 49  NLDQSEIYFKHFLQQYNKSYDDPKEYQYRYNVFKDNLNKINSQNRENLLNNKNNNDSLST 108

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL---PTNDLPADFDWREKGAV 156
           SA  G+ +FSD TP E   +  G    L       +  I+   P   LP  +DWR+   V
Sbjct: 109 SAQFGVNKFSDKTPDEVLHSNTGFFLNLSQHYTLCENRIVKGAPDIRLPDYYDWRDTNKV 168

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
            P+KDQG CGSCW+F   G +E    +   KL+ LSEQQL+DCD           D GCN
Sbjct: 169 TPIKDQGVCGSCWAFVAIGNIESQYAIRHNKLIDLSEQQLLDCD---------EVDLGCN 219

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIA 275
           GGLM+ AF+  L  GG+  E DYPY G+++   C  D  KIA  + + F     DE+++ 
Sbjct: 220 GGLMHLAFQELLLMGGVETEADYPYQGSEQ--MCTLDNRKIAVKLNSCFKYDIRDENKLK 277

Query: 276 ANLVKNGPLAVAINAVYMQTYIGGV--SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKP 333
             +   GP+A+A++A+ +  Y  G+   C       L+H VLL+G+G            P
Sbjct: 278 ELVYTTGPVAIAVDAMDIINYRRGILNQCHIY---DLNHAVLLIGWGIEN-------NVP 327

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGV 362
           YWIIKNSWGE WGENG+ ++ R  N CG+
Sbjct: 328 YWIIKNSWGEDWGENGFLRVRRNVNACGL 356


>gi|356559055|ref|XP_003547817.1| PREDICTED: cysteine proteinase RD21a [Glycine max]
          Length = 366

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 162/301 (53%), Gaps = 31/301 (10%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQK-LDPSATHGITQFSDLTPAEFRRTYLGL- 123
           K  K Y    E D RF +FK NL     H    + +   G+ QF+D+T  E+R  Y G  
Sbjct: 46  KHQKVYNGLREKDKRFQVFKDNLGFIQEHNNNQNNTYKLGLNQFADMTNEEYRVMYFGTK 105

Query: 124 ----RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEG 179
               RR ++      +      + LP   DWR KGAV P+KDQGSCGSCW+FST   +E 
Sbjct: 106 SDAKRRLMKTKSTGHRYAYSAGDRLPVHVDWRVKGAVAPIKDQGSCGSCWAFSTVATVEA 165

Query: 180 ANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDY 239
            N + TGK VSLSEQ+LVDCD         + + GCNGGLM+ AFE+ ++ GG+  ++DY
Sbjct: 166 INKIVTGKFVSLSEQELVDCDR--------AYNEGCNGGLMDYAFEFIIQNGGIDTDKDY 217

Query: 240 PYTGTDRGHACKFDKSKIAASVAN---FSVVSLDEDQIAANLVKNGPLAVAINAV--YMQ 294
           PY G D    C  D +K  A V N   F  V   ++      V + P+++AI A    +Q
Sbjct: 218 PYRGFD--GIC--DPTKKNAKVVNIDGFEDVPPYDENALKKAVAHQPVSIAIEASGRDLQ 273

Query: 295 TYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
            Y  GV     C   LDHGV++VGYGS            YW+++NSWG  WGE+GY+K+ 
Sbjct: 274 LYQSGVFTGK-CGTSLDHGVVVVGYGSENGV-------DYWLVRNSWGTGWGEDGYFKMQ 325

Query: 355 R 355
           R
Sbjct: 326 R 326


>gi|146078033|ref|XP_001463431.1| cathepsin L-like protease [Leishmania infantum JPCM5]
 gi|134067516|emb|CAM65796.1| cathepsin L-like protease [Leishmania infantum JPCM5]
          Length = 381

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/309 (40%), Positives = 162/309 (52%), Gaps = 38/309 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  FK+ + +AY +  E   R   F+ NL     HQ  +P A  GIT+F DL+ AEF   
Sbjct: 38  FEEFKRTYRRAYGTLAEEQQRLANFERNLELMREHQARNPHARFGITKFFDLSEAEFAAR 97

Query: 120 YL-GLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
           YL G        + A Q       DL   P   DWREKGAV PVKDQG+CGSCW+FS  G
Sbjct: 98  YLNGAAYFAAAKQHAGQHYRKARADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVG 157

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK--AGGL 233
            +E     A   LVSLSEQQLV CD +         D+GCNGGLM  AFE+ L+   G +
Sbjct: 158 NIESQWARAGHGLVSLSEQQLVSCDDK---------DNGCNGGLMLQAFEWLLRHMYGIV 208

Query: 234 MREEDYPYTGTDRGHACKFDKSKI--AASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
             E+ YPYT  +   A   + SK+   A +  + ++  +E  +AA L +NGP+A+A++A 
Sbjct: 209 FTEKSYPYTSGNGDVAECLNSSKLVPGAQIDGYVMIPSNETVMAAWLAENGPIAIAVDAS 268

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
              +Y                GVLLVGY   G         PYW+IKNSWGE WGE GY 
Sbjct: 269 SFMSY--------------QSGVLLVGYNKTGGV-------PYWVIKNSWGEDWGEKGYV 307

Query: 352 KICRGRNVC 360
           ++  G N C
Sbjct: 308 RVAMGLNAC 316


>gi|74927078|sp|Q86GF7.1|CRUST_PANBO RecName: Full=Crustapain; AltName: Full=NsCys; Flags: Precursor
 gi|28971811|dbj|BAC65417.1| crustapain [Pandalus borealis]
          Length = 323

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/313 (41%), Positives = 164/313 (52%), Gaps = 34/313 (10%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLR----RAARHQKLDPSATHGITQFSDLTPAEFRR 118
           FK KF K YA+ EE  HR ++F   L+       R+ K + +    I  FSDLT  E   
Sbjct: 23  FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLA 82

Query: 119 TYLGLRRKLR----LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           T  G+ R+      LPK A      PT  + AD DWR KGAV PVKDQG CGSCW+FS  
Sbjct: 83  TKTGMTRRRHPLSVLPKSA------PTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAV 136

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
            ALEGA+FL TG LVSLSEQ LVDC            + GCNGG    A++Y +   G+ 
Sbjct: 137 AALEGAHFLKTGDLVSLSEQNLVDCSSSYG-------NQGCNGGWPYQAYQYIIANRGID 189

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINA--V 291
            E  YPY   D    C++D   I A+V+++    S DE  +   +   GP++V I+A   
Sbjct: 190 TESSYPYKAIDDN--CRYDAGNIGATVSSYVEPASGDESALQHAVQNEGPVSVCIDAGQS 247

Query: 292 YMQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGY 350
              +Y GGV     C S   +H V  VGYG+            YWI+KNSWG  WGE+GY
Sbjct: 248 SFGSYGGGVYYEPNCDSWYANHAVTAVGYGT------DANGGDYWIVKNSWGAWWGESGY 301

Query: 351 YKICRGR-NVCGV 362
            K+ R R N C +
Sbjct: 302 IKMARNRDNNCAI 314


>gi|357619726|gb|EHJ72185.1| cathepsin [Danaus plexippus]
          Length = 1118

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 183/340 (53%), Gaps = 41/340 (12%)

Query: 37   DGGDEILSHHESTNNDLLGAEHHFSL---------FKKKFNKAYASQEEHDHRFTIFKAN 87
            +GG+++   +   + +L G +H +SL         F K +NK Y  + E + RF IF  N
Sbjct: 788  NGGEKVALQYNVYSREL-GQKHLYSLEEAPTLFEQFIKDYNKEY-DESEKEERFKIFVNN 845

Query: 88   LRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN---DL 144
            L+      +   +A +GI +FSDL+  EF + Y GL+R+     +  +   LP +     
Sbjct: 846  LKDINAMNERSSNAVYGINKFSDLSKDEFVKFYTGLKREESPSNEDHKKTDLPKSFNVTA 905

Query: 145  PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECD 204
            P  FDWR+KG V  VK QG C SCW+FS  G +E  N + TGKL+ +SEQQLVDCD    
Sbjct: 906  PDQFDWRKKGVVSSVKFQGHCVSCWAFSVAGNVESINAIKTGKLIDVSEQQLVDCDE--- 962

Query: 205  PEEPGSCDSGCNGGLM--NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVA 262
                   + GC+GG+    S F Y  K G  M  E YPY G +    C+++ SK+   + 
Sbjct: 963  ------WNFGCSGGIACSKSHFSYFHKKGA-MSLESYPYVGKE--GQCRYNSSKVVIRLK 1013

Query: 263  NFS-VVSLDEDQIAANLVKNGPLAVAINAVYMQTYIGGV---SCPYICSRRLDHGVLLVG 318
            ++   ++L ED+I   L   GPL++ I++  +  Y GG+    C  +  ++ +H VLLVG
Sbjct: 1014 DYQYFIALSEDEIKEYLYNIGPLSIDIDSSQIHHYKGGIVIKECQEV--KKTNHAVLLVG 1071

Query: 319  YGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGRN 358
            YG             YWI+KNSWG++WGE GY++I RG N
Sbjct: 1072 YGKENGV-------EYWIVKNSWGQNWGEKGYFRIQRGVN 1104



 Score =  188 bits (477), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/294 (37%), Positives = 157/294 (53%), Gaps = 27/294 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  F K +NK Y  + E + RF IF  NL+      +   +A +GI +FSDL+  EF + 
Sbjct: 519 FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKY 577

Query: 120 YLGLRRKLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           Y GL+R+     +  +   LP +     P  FDWR+KG V  +K+Q  CGSCW+FS  G 
Sbjct: 578 YTGLKREESPSNEDHKKTDLPESFNVTAPDQFDWRKKGVVSSIKNQKHCGSCWAFSAAGN 637

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMRE 236
           +E  + + TGKLV +SEQQLVDCD         S DSGC+GGL  +A  Y  +  G +  
Sbjct: 638 VESIHAIKTGKLVHVSEQQLVDCD---------SQDSGCSGGLTWNAMRY-FRTNGAVSL 687

Query: 237 EDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVYMQT 295
           + YPY   +    C++D +K+   + ++  +  L EDQI  +L   G L++ I +  +  
Sbjct: 688 KSYPYVAQNEN--CRYDSNKVVIRLKDYKHITQLSEDQIKEHLYNIGLLSIDITSTQLTW 745

Query: 296 YIGGVSCPYICSRR--LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
           Y GG+     C R   +DH VLLV YG             YWI+KNSWG++ GE
Sbjct: 746 YEGGILIEE-CRRSDLVDHAVLLVEYGKENSV-------EYWIVKNSWGQNGGE 791



 Score =  186 bits (472), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/265 (39%), Positives = 148/265 (55%), Gaps = 26/265 (9%)

Query: 100 SATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPILPTN---DLPADFDWREKGAV 156
           +A +GI +FSDL+  EF + Y GL+R+     +  +   LP +     P  FDWR+KG V
Sbjct: 7   NAVYGINKFSDLSKEEFVKYYTGLKREESPSNEDHKKTDLPESFNVTAPDQFDWRKKGVV 66

Query: 157 GPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCN 216
             +K+Q  CGSCW+FS    +E  + + TGKL+ +SEQQL+DCD           DSGC+
Sbjct: 67  SSIKNQKHCGSCWAFSAAANVESIHAIKTGKLIDVSEQQLLDCD---------KYDSGCS 117

Query: 217 GGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIA 275
           GGL   A  Y + A G M  + YPY   +    C++D SK+   +  +     L EDQI 
Sbjct: 118 GGLPWDALRYFV-ANGAMSLKSYPYVAKE--GKCRYDSSKVEIRLKEYKHKEKLSEDQIK 174

Query: 276 ANLVKNGPLAVAINAVYMQTYIGGVSCPYICSRR--LDHGVLLVGYGSAGYAPIRLKEKP 333
            +L   GPL++AI +  + +Y GG+     C R   ++H VLLVGYG             
Sbjct: 175 EHLYNIGPLSIAITSSPLASYNGGILIEE-CHRSYLINHAVLLVGYGKENGV-------K 226

Query: 334 YWIIKNSWGESWGENGYYKICRGRN 358
           YWI+KNSWG++WGENGY+++  G N
Sbjct: 227 YWIVKNSWGQNWGENGYFRMKMGVN 251



 Score =  123 bits (308), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 91/163 (55%), Gaps = 13/163 (7%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  F K +NK Y  + E + RF IF  NL+      +   +A +GI +FSDL+  EF + 
Sbjct: 302 FEQFIKDYNKEY-DESEKEERFKIFVNNLKDINAMNERSSNAVYGINKFSDLSKEEFIKY 360

Query: 120 YLGLRRKLRLPKDADQAPILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGA 176
           Y GL+R      +  ++  LP +     P  FDWR+KG V  VK+Q  CGSCW+FS    
Sbjct: 361 YTGLKRDRCTTTEHHKSTDLPKSFNITAPDQFDWRKKGVVSSVKNQRHCGSCWAFSAAAN 420

Query: 177 LEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGL 219
           +E  + + TGKL+ +SEQQL+DCD           DSGC+GGL
Sbjct: 421 VESIHAIKTGKLIDVSEQQLLDCD---------KYDSGCSGGL 454


>gi|125547256|gb|EAY93078.1| hypothetical protein OsI_14879 [Oryza sativa Indica Group]
          Length = 339

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/330 (37%), Positives = 174/330 (52%), Gaps = 29/330 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           +L+  E +++  + A H    + +++ + Y    E   RF IFKAN+         +   
Sbjct: 21  VLAAREQSDHAAMVARHE--RWMEQYGRVYKDATEKARRFEIFKANVAFIESFNAGNHKF 78

Query: 102 THGITQFSDLTPAEFRRTYLG---LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGP 158
             G+ QF+DLT  EFR T      +   +R+P       +   + LPA  DWR KGAV P
Sbjct: 79  WLGVNQFADLTNYEFRATKTNKGFIPSTVRVPTTFRYENV-SIDTLPATVDWRTKGAVTP 137

Query: 159 VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGG 218
           +KDQG CG CW+FS   A+EG   L+TGKL+SLSEQ+LVDCD   +       D GC GG
Sbjct: 138 IKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGE-------DQGCEGG 190

Query: 219 LMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANL 278
           LM+ AF++ +K GGL  E  YPYT  D    C    S  AA++  +  V  + +      
Sbjct: 191 LMDDAFKFIIKNGGLTTESKYPYTAAD--GKCN-GGSNSAATIKGYEEVPANNEAALMKA 247

Query: 279 VKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           V N P++VA++   +  Q Y GGV     C   LDHG++ +GYG  G          YW+
Sbjct: 248 VANQPVSVAVDGGDMTFQFYSGGVMTGS-CGTDLDHGIVAIGYGKDG------DGTQYWL 300

Query: 337 IKNSWGESWGENGYYK----ICRGRNVCGV 362
           +KNSWG +WGENG+ +    I   R +CG+
Sbjct: 301 LKNSWGTTWGENGFLRMEKDISDKRGMCGL 330


>gi|307111936|gb|EFN60170.1| hypothetical protein CHLNCDRAFT_59551 [Chlorella variabilis]
          Length = 364

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/297 (41%), Positives = 168/297 (56%), Gaps = 19/297 (6%)

Query: 64  KKKFNKAYASQEE-HDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLG 122
           K   N+AYAS  E ++ RF I+  NLR A  +     S    +  ++DL+  E+R   LG
Sbjct: 54  KPPSNRAYASSAEVYERRFNIWLDNLRFAHEYNARHTSHWLSMGVYADLSQDEYRSKALG 113

Query: 123 LRRKLRLPKDADQAPILPTNDLPAD-FDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
               L   +    AP L    +P +  DW   GAV PVKDQ  CGSCW+FSTTGA+EGAN
Sbjct: 114 YNAHLHKKRPLRAAPFLYKGTVPPEEVDWVAGGAVTPVKDQLLCGSCWAFSTTGAVEGAN 173

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
            +ATGKLVSLSEQ LVDCD E         D+GC GG M+SAF++ +  GG+  E+DYPY
Sbjct: 174 AIATGKLVSLSEQMLVDCDRE--------YDTGCRGGFMDSAFDFIVNNGGIDTEDDYPY 225

Query: 242 TGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIG 298
              D    C+ ++++    ++  +  V  +++      V + P++VAI A  +  Q Y G
Sbjct: 226 RAED--GICQDNRTRRHVVTIDGYQDVPPNDENALMKAVAHQPVSVAIEADQLAFQLYGG 283

Query: 299 GVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GV     C   LDH VL+VGYG+A      L   PYW++KNSWG  WGE GY ++ R
Sbjct: 284 GV-FDAECGTALDHAVLVVGYGTASNGTHNL---PYWLVKNSWGAEWGEKGYIRLLR 336


>gi|118360450|ref|XP_001013459.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila]
 gi|89295226|gb|EAR93214.1| Papain family cysteine protease containing protein [Tetrahymena
           thermophila SB210]
          Length = 320

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 176/310 (56%), Gaps = 38/310 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           +S FK  +NK YA  +   +R  +F  NL+    +         GIT+F DLT  EF++T
Sbjct: 43  WSTFKNSYNKKYADPDFEQYRIEVFTENLKIIDSN-----CQNFGITKFMDLTQEEFKQT 97

Query: 120 YLGLRRKLRLPKDADQAPILPTNDLPADF--DWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
           YL L+ K    K  ++ P    ND   D   DW  KGAV PVKDQG CGSCWSFSTTGA+
Sbjct: 98  YLTLKTK----KYIEEIPETVFNDSNGDIEIDWTMKGAVTPVKDQGKCGSCWSFSTTGAV 153

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EGA+FL++ +LVSLSEQ L+DC          + + GCNGGLM++AF++ +   G+  E 
Sbjct: 154 EGAHFLSSNELVSLSEQYLIDCSK--------NGNEGCNGGLMDTAFDF-IAQNGIPTEN 204

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVYMQTYI 297
            YPY   D    CK        S    +++S ++  + + L K  P+A+A++A   Q Y 
Sbjct: 205 AYPYKALD--GTCKMTTGPYKISSYQ-NIISCND--LLSKLQKQ-PIAIAVDANNFQFYT 258

Query: 298 GGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR 357
            G+     C + LDHGVLLVGY S        K+K +W +KNSWG SWGE+GY ++  G 
Sbjct: 259 KGIFSK--CGKNLDHGVLLVGYSS--------KDK-FWKVKNSWGSSWGEDGYIRLSAG- 306

Query: 358 NVCGVDSMVS 367
           N CG+ +  S
Sbjct: 307 NTCGLCNQAS 316


>gi|309380130|gb|ADO65978.1| cathepsin L [Eriocheir sinensis]
 gi|309380134|gb|ADO65980.1| cathepsin L [Eriocheir sinensis]
          Length = 325

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/320 (37%), Positives = 177/320 (55%), Gaps = 28/320 (8%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP----SATHGITQFSDLTP 113
           + +  FK ++ K Y S +E  +R ++++ N      H +       S T  + QF D+T 
Sbjct: 20  NEWQQFKARYGKQYRSTKEDSYRQSVYEQNQEFINSHNEQYENGLVSFTLAMNQFGDMTT 79

Query: 114 AEFRRTYLG-LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
            E      G L    ++P+     P++  ++LP   DWR+KGAV PVKDQ +CGSCW+FS
Sbjct: 80  EEINAAMNGFLSAGKKVPRGTMYQPLV--DELPDTVDWRDKGAVTPVKDQKACGSCWAFS 137

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL+TGKLVSLSEQ LVDC  +         + GC GGLM++AF Y     G
Sbjct: 138 ATGSLEGQHFLSTGKLVSLSEQNLVDCSDKYG-------NFGCGGGLMDNAFRYIKDNNG 190

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINA- 290
           +  EE YPY    +   C+F+   + A+++++  +    ED +   + + GP++VAI+A 
Sbjct: 191 IDTEESYPYEA--KNGPCRFNSDNVGATLSSYVDIQHGSEDDLQKAVAEKGPVSVAIDAS 248

Query: 291 -VYMQTYIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
                 Y  G+     CS   LDHGVL VGYG+            YW++KNSW E+WG++
Sbjct: 249 TSTFHFYSRGIYYDEKCSSSFLDHGVLAVGYGTD-------DSSDYWLVKNSWNETWGDS 301

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY K+ R R N CG+ S  S
Sbjct: 302 GYIKMSRNRNNNCGIASQAS 321


>gi|2511693|emb|CAB17076.1| cysteine proteinase precursor [Phaseolus vulgaris]
          Length = 455

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/297 (41%), Positives = 163/297 (54%), Gaps = 26/297 (8%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGL-- 123
           K  K Y +  E D RF IFK NLR   +    + +   G+ +F+DLT  E+R  YLG   
Sbjct: 46  KHGKLYNALGEKDKRFQIFKDNLRFIDQQNAENRTYKLGLNRFADLTNEEYRARYLGTKI 105

Query: 124 ---RRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGA 180
              RR  R P +     +  T  LP   DWR++GAV PVKDQ SCGSCW+FS  GA+EG 
Sbjct: 106 DPNRRLGRTPSNRYAPRVGET--LPDSVDWRKEGAVVPVKDQASCGSCWAFSAIGAVEGI 163

Query: 181 NFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYP 240
           N + TG L+SLSEQ+LVDCD           + GCNGGLM+ AFE+ +K GG+  EEDYP
Sbjct: 164 NKIVTGDLISLSEQELVDCDT--------GYNMGCNGGLMDYAFEFIIKNGGIDSEEDYP 215

Query: 241 YTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN--AVYMQTYIG 298
           Y G D G   ++ K+    S+  +  V+  ++      V N P++VA+       Q Y  
Sbjct: 216 YKGVD-GRCDEYRKNAKVVSIDGYEDVNTYDELALKKAVANQPVSVAVEGGGREFQLYSS 274

Query: 299 GVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GV     C   LDHGV+ VGYG+            +WI++NSWG  WGE GY ++ R
Sbjct: 275 GVFTGR-CGTALDHGVVAVGYGTD-------NGHDFWIVRNSWGADWGEEGYIRLER 323


>gi|397516975|ref|XP_003828695.1| PREDICTED: cathepsin W [Pan paniscus]
          Length = 376

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 169/335 (50%), Gaps = 42/335 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD-PSATHGITQFSDLTPAEFRR 118
           F LF+ +FN++Y S EEH HR  IF  NL +A R Q+ D  +A  G+T FSDLT  EF +
Sbjct: 42  FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 119 TYLGLRRKLRLPKDADQAPIL--------PTNDLPADFDWRE-KGAVGPVKDQGSCGSCW 169
            Y G RR       A   P +        P   +P   DWR+  GA+ P+KDQ +C  CW
Sbjct: 102 LY-GYRRA------AGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNCCW 154

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           + +  G +E    ++    V +S Q+L+DC           C  GC GG +  AF   L 
Sbjct: 155 AMAAAGNIETLWRISFWDFVDVSVQELLDCSR---------CGDGCQGGFVWDAFITVLN 205

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
             GL  E+DYP+ G  R H C   K +  A + +F ++  +E +IA  L   GP+ V IN
Sbjct: 206 NSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTIN 265

Query: 290 AVYMQTYIGGV--SCPYICSRRL-DHGVLLVGYG-------------SAGYAPIRLKEKP 333
              ++ Y  GV  + P  C  +L DH VLLVG+G             S+   P      P
Sbjct: 266 MKPLRLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTP 325

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           YWI+KNSWG  WGE GY+++ RG N CG+     T
Sbjct: 326 YWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360


>gi|194883222|ref|XP_001975702.1| GG20414 [Drosophila erecta]
 gi|190658889|gb|EDV56102.1| GG20414 [Drosophila erecta]
          Length = 341

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/332 (39%), Positives = 183/332 (55%), Gaps = 33/332 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL----DPSATHGITQ 107
           D++  E H   FK +  K Y    E   R  IF  N  + A+H +       S    + +
Sbjct: 23  DVVMEEWH--TFKLEHRKNYQDDTEERFRLKIFNENKHKIAKHNQRYAEGKVSFKLAVNK 80

Query: 108 FSDLTPAEFRRTYLG----LRRKLRLPKDADQAP--ILPTN-DLPADFDWREKGAVGPVK 160
           ++DL   EFR+   G    L ++LR   D+ +    I P +  LP   DWR KGAV  VK
Sbjct: 81  YADLLHHEFRQLMNGFNYTLHKQLRSTDDSFKGVTFISPAHVTLPKSVDWRTKGAVTAVK 140

Query: 161 DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
           DQG CGSCW+FS+TGALEG +F  +G LVSLSEQ LVDC  +         ++GCNGGLM
Sbjct: 141 DQGHCGSCWAFSSTGALEGQHFRKSGVLVSLSEQNLVDCSTKYG-------NNGCNGGLM 193

Query: 221 NSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLV 279
           ++AF Y    GG+  E+ YPY   D   +C F+K  I A+   F+ +   DE ++A  + 
Sbjct: 194 DNAFRYIKDNGGIDTEKSYPYEAIDD--SCHFNKGAIGATDRGFTDIPQGDEKKMAEAVA 251

Query: 280 KNGPLAVAINAVY--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
             GP+AVAI+A +   Q Y  GV + P   ++ LDHGVL+VGYG+            YW+
Sbjct: 252 TVGPVAVAIDASHESFQFYSEGVYNEPQCDAQNLDHGVLVVGYGTDESGD------DYWL 305

Query: 337 IKNSWGESWGENGYYKICRGR-NVCGVDSMVS 367
           +KNSWG +WG+ G+ K+ R + N CG+ S  S
Sbjct: 306 VKNSWGTTWGDKGFIKMLRNKDNQCGIASASS 337


>gi|114638622|ref|XP_001170363.1| PREDICTED: cathepsin W [Pan troglodytes]
          Length = 376

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 169/335 (50%), Gaps = 42/335 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLD-PSATHGITQFSDLTPAEFRR 118
           F LF+ +FN++Y S EEH HR  IF  NL +A R Q+ D  +A  G+T FSDLT  EF +
Sbjct: 42  FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLGTAEFGVTPFSDLTEEEFGQ 101

Query: 119 TYLGLRRKLRLPKDADQAPIL--------PTNDLPADFDWRE-KGAVGPVKDQGSCGSCW 169
            Y G RR       A   P +        P   +P   DWR+  GA+ P+KDQ +C  CW
Sbjct: 102 LY-GYRRA------AGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNCCW 154

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           + +  G +E    ++    V +S Q+L+DC           C  GC GG +  AF   L 
Sbjct: 155 AMAAAGNIETLWRISFWDFVDVSVQELLDCSR---------CGDGCQGGFVWDAFITVLN 205

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
             GL  E+DYP+ G  R H C   K +  A + +F ++  +E +IA  L   GP+ V IN
Sbjct: 206 NSGLASEKDYPFQGKVRAHRCHPKKYQKVAWIQDFIMLQNNEHRIAQYLATYGPITVTIN 265

Query: 290 AVYMQTYIGGV--SCPYICSRRL-DHGVLLVGYG-------------SAGYAPIRLKEKP 333
              ++ Y  GV  + P  C  +L DH VLLVG+G             S+   P      P
Sbjct: 266 MKPLRLYRKGVIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAERVSSQSQPQPPHPTP 325

Query: 334 YWIIKNSWGESWGENGYYKICRGRNVCGVDSMVST 368
           YWI+KNSWG  WGE GY+++ RG N CG+     T
Sbjct: 326 YWILKNSWGAQWGEKGYFRLHRGSNTCGITKFPLT 360


>gi|387015020|gb|AFJ49629.1| Cathepsin H [Crotalus adamanteus]
          Length = 337

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/323 (38%), Positives = 170/323 (52%), Gaps = 36/323 (11%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           E  F  +  +  +AY S+EE  HR  IF  N ++  +H   + S   G+ QFSD+T  EF
Sbjct: 33  EQLFKAWASQHRRAYRSEEEFRHRLQIFLDNKQKIDKHNAGNSSFRMGLNQFSDMTFTEF 92

Query: 117 RRTYLGLRRKL------RLPKDADQAPILPTNDLPADFDWREKGA-VGPVKDQGSCGSCW 169
           R+ YL    +         P+ A           P   DWR+KG  V PVK+QGSCGSCW
Sbjct: 93  RKKYLWQEPQNCSATMGNFPRSA--------GPCPKAIDWRKKGKFVSPVKNQGSCGSCW 144

Query: 170 SFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLK 229
           +FSTTG LE A  + TGKL++L+EQQL+DC    +       + GC+GGL + AFEY L 
Sbjct: 145 TFSTTGCLESAIAIKTGKLLNLAEQQLIDCAQNFN-------NFGCSGGLPSQAFEYILY 197

Query: 230 AGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAI 288
             GLM EE YPY   +    CKF   K  A + +   +SL DE  +   +    P+++A 
Sbjct: 198 NKGLMDEEAYPYRAQN--GTCKFQPQKAVAFIKDVVNISLYDEQGLVQAVGTYNPVSIAF 255

Query: 289 NAVY-MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGES 344
                   Y  GV     C +   +++H VL VGYG  G         P+WI+KNSWG S
Sbjct: 256 EVREDFVHYQEGVYTSTDCDKTPDKVNHAVLAVGYGEEGGV-------PFWIVKNSWGTS 308

Query: 345 WGENGYYKICRGRNVCGVDSMVS 367
           WG +GY+ I RG+N+CG+    S
Sbjct: 309 WGLDGYFNIERGKNMCGLADCAS 331


>gi|387915132|gb|AFK11175.1| cathspsin H [Callorhinchus milii]
          Length = 330

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/313 (40%), Positives = 169/313 (53%), Gaps = 33/313 (10%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRT 119
           F  +  + NK Y+S EE+ +R   F  N R+   H     S   G+ QFSD+T +EF++ 
Sbjct: 30  FKTWMTQHNKHYSS-EEYSYRLRTFIQNKRKVEEHNSGRHSYRMGLNQFSDMTFSEFKKL 88

Query: 120 YLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKG-AVGPVKDQGSCGSCWSFSTTG 175
           YL     LR P++        +L     P   DWR KG  V PVK+QG CGSCW+FSTTG
Sbjct: 89  YL-----LREPQNCSATRGNHVLSMGPYPDFVDWRTKGNYVTPVKNQGGCGSCWTFSTTG 143

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
            LE A  + TGKL+SL+EQQLVDC            + GCNGGL + AFEY    GGL  
Sbjct: 144 CLESAIAIKTGKLLSLAEQQLVDCAGAYK-------NHGCNGGLPSQAFEYIKYNGGLEA 196

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAV--Y 292
           E+DYPYT  D+   C++  +K  A V    ++   DE+ I   + +  P+++A      +
Sbjct: 197 EKDYPYTAQDQ--HCQYQPNKAVAFVKEVVNITQYDENGIVDAVARLNPVSIAFEVTDDF 254

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
            Q Y GGV     C     +++H VL VGYG             YWI+KNSWG  WG NG
Sbjct: 255 FQ-YEGGVYSNSNCDSTPDKVNHAVLAVGYGVQ-------NGTKYWIVKNSWGPEWGLNG 306

Query: 350 YYKICRGRNVCGV 362
           Y+ I RG+N+CG+
Sbjct: 307 YFYIIRGKNMCGL 319


>gi|111036374|dbj|BAF02516.1| cathepsin L-like proteinase [Echinococcus multilocularis]
          Length = 338

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 175/314 (55%), Gaps = 31/314 (9%)

Query: 68  NKAYASQEEHDHRFTIFKANLRRAARHQK-----LDPSATHGITQFSDLTPAEFRRTYLG 122
           NK YA+  E   R  IF  N      H +     L+  +T  +  F+DLT  EF   YL 
Sbjct: 38  NKTYATLREEHLRMRIFINNYLFVRWHNERYYLGLETYST-ALNAFADLTLEEFAEKYLT 96

Query: 123 LRRKLR--LPKD-ADQAPILPTNDL-PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           L++     + +D + Q    PT  L P   DWR+KG V P+KDQG CGSCW+FS TGALE
Sbjct: 97  LKQTPMEGIWQDMSTQYVERPTRMLVPDSIDWRKKGLVTPIKDQGDCGSCWAFSATGALE 156

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G     TGKL+SLSEQQLVDC      E       GCNGG MN AF Y ++ G    E D
Sbjct: 157 GQLKRKTGKLISLSEQQLVDCSTYTGNE-------GCNGGDMNDAFRYWMRNGA-ESESD 208

Query: 239 YPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY--MQT 295
           YPYT  D    CKF+ SK+   V+ F  V    EDQ+  ++ + GP++VAI+A       
Sbjct: 209 YPYTAMD--GKCKFNSSKVVTKVSKFVKVPKKREDQLKLSVAQVGPVSVAIDATSSGFML 266

Query: 296 YIGGVSCPYICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y  G+     CS++ LDH VL+VGY +      + ++K YWI+KNSWGE WG+ GY  + 
Sbjct: 267 YKKGIYQDNTCSQQYLDHAVLVVGYDAD-----KTRQK-YWIVKNSWGEDWGQRGYIWMA 320

Query: 355 RGR-NVCGVDSMVS 367
           R + N+CG+ +M S
Sbjct: 321 RDKGNMCGIATMAS 334


>gi|332252750|ref|XP_003275518.1| PREDICTED: pro-cathepsin H [Nomascus leucogenys]
          Length = 335

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 174/318 (54%), Gaps = 31/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  +  K +K Y+++E H HR  +F +N R+   H   + +    + QFSD++ AE + 
Sbjct: 34  HFKSWMSKHHKTYSTEEYH-HRLQMFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKH 92

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTT 174
            YL        P++        +  T   P   DWR+KG  V PVK+QG+CGSCW+FSTT
Sbjct: 93  KYL-----WSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTT 147

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +ATGK++SL+EQQLVDC  + +       + GC GGL + AFEY L   G+M
Sbjct: 148 GALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNKGIM 200

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G D G+ CKF   K    V + + +++ DE+ +   +    P++ A      
Sbjct: 201 GEDTYPYQGKD-GY-CKFRPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQD 258

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  G+     C +   +++H VL VGYG            PYWI+KNSWG  WG NG
Sbjct: 259 FMMYRRGIYSSTSCHKTPDKVNHAVLAVGYGEK-------NGIPYWIVKNSWGPQWGMNG 311

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG+N+CG+ +  S
Sbjct: 312 YFLIERGKNMCGLAACAS 329


>gi|242020003|ref|XP_002430447.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
 gi|212515585|gb|EEB17709.1| Cathepsin L precursor, putative [Pediculus humanus corporis]
          Length = 345

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/347 (38%), Positives = 182/347 (52%), Gaps = 37/347 (10%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKL 97
           +LS +  +  DL+  E  + LFK +  K Y +  E   R  IF  N ++  +H    Q+ 
Sbjct: 11  VLSINAVSFYDLVMEE--WQLFKAEHKKNYNNDVEEKFRMKIFMDNKQKITKHNTKYQRG 68

Query: 98  DPSATHGITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAP---------ILPTN-DLPAD 147
           +     G+ ++SD+   EF  T+ G  + +  P                I P N  LP  
Sbjct: 69  EVGYKLGLNKYSDMLHHEFINTFNGFNKSIIPPHLRSNNGKTHLKGSFFIPPANVKLPKH 128

Query: 148 FDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEE 207
            DW + GAV PVKDQG CGSCW+FS TGALEG +F  T  LVSLSEQ L+DC  E     
Sbjct: 129 VDWVKLGAVTPVKDQGHCGSCWAFSATGALEGLHFRKTKVLVSLSEQNLIDCSTE----- 183

Query: 208 PGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVV 267
               ++GCNGGLM+ AF+Y    GG+  E  YPY G +    C+++     A    ++ V
Sbjct: 184 --EGNNGCNGGLMDQAFQYVRINGGIDTERSYPYEGNND--VCRYEPENSGAIDTGYTDV 239

Query: 268 SL-DEDQIAANLVKNGPLAVAINAVY--MQTYIGGVSCPYICSRR---LDHGVLLVGYGS 321
            L DED + + +   GP++VAI+A     Q Y  GV     C      LDHGVL+VGYG+
Sbjct: 240 PLGDEDALKSAVATVGPVSVAIDASQESFQLYSSGVYFEPNCKNEPESLDHGVLVVGYGT 299

Query: 322 AGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR-GRNVCGVDSMVS 367
                    ++ YW++KNSWG+SWGENGY K+ R   N CG+ +  S
Sbjct: 300 D-----EETQQDYWLVKNSWGDSWGENGYIKMARNADNQCGIATQPS 341


>gi|317106666|dbj|BAJ53169.1| JHL18I08.3 [Jatropha curcas]
          Length = 441

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/323 (39%), Positives = 176/323 (54%), Gaps = 33/323 (10%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKL-DPSATHGITQFSDLTPAEF 116
           H F  + ++  K YASQEE   R  +F+ N      H    + S T  +  F+DLT  EF
Sbjct: 28  HLFETWCQQHGKTYASQEEKLFRLKVFQDNYDFVTEHNSQGNSSYTLSLNAFADLTHHEF 87

Query: 117 RRTYLGLRR----KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           + + LGL       L + +   Q P     D+PA  DWR+ GAV  VKDQG+CG+CWSFS
Sbjct: 88  KASRLGLSSAASASLNVDRSNRQIPDFVA-DVPASVDWRKNGAVTQVKDQGNCGACWSFS 146

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TGA+EG N + TG LVSLSEQ+LVDCD         S ++GC GG+M+ AF++ +   G
Sbjct: 147 ATGAIEGINKIVTGSLVSLSEQELVDCDK--------SYNNGCEGGIMDYAFQFVIDNHG 198

Query: 233 LMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLDEDQIAANLVKNGPLAVAI--N 289
           +  EEDYPY G DR  +C  +K K    ++  +  V  + ++     V N P++V I  +
Sbjct: 199 IDTEEDYPYQGRDR--SCNKEKLKRHVVTIDGYVDVPQNNEKELLKAVANQPVSVGICGS 256

Query: 290 AVYMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
               Q Y  G+ + P  CS  LDH VL+VGYGS            YWI+KNSWG  WG +
Sbjct: 257 ERAFQLYSKGIFTGP--CSTSLDHAVLIVGYGSENGV-------DYWIVKNSWGSYWGMD 307

Query: 349 GYYKICRG----RNVCGVDSMVS 367
           GY  + R     R +CG++ + S
Sbjct: 308 GYMHMQRNSGSSRGLCGINMLAS 330


>gi|281427380|ref|NP_001163996.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|281427798|ref|NP_001164001.1| cathepsin L-like proteinase precursor [Tribolium castaneum]
 gi|270001241|gb|EEZ97688.1| cathepsin L precursor [Tribolium castaneum]
 gi|270016928|gb|EFA13374.1| hypothetical protein TcasGA2_TC001950 [Tribolium castaneum]
          Length = 328

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/323 (40%), Positives = 175/323 (54%), Gaps = 39/323 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ----KLDPSATHGITQFSDLTPAE 115
           ++ FK    K Y+S  E   R  IF+ NL +   H     K + + T  + QF+D+T  E
Sbjct: 26  WAEFKLTHKKQYSSPIEELRRKAIFQDNLVKIEEHNAKFAKGEVTYTKAVNQFADMTADE 85

Query: 116 FRR-------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSC 168
           F         T   +  KLR+P      P        A+ DWR K AV  VKDQG CGSC
Sbjct: 86  FMAYVNRGLATKPKMNEKLRIPFVKSGKPA------AAEVDWRSK-AVTEVKDQGQCGSC 138

Query: 169 WSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTL 228
           WSFSTTGA+EG   ++   L SLSEQ LVDC  +         ++GCNGG M+SAF+Y +
Sbjct: 139 WSFSTTGAVEGQLAISGKGLTSLSEQNLVDCSSQYG-------NAGCNGGWMDSAFDY-I 190

Query: 229 KAGGLMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVA 287
              G+M E  YPYT  D    C+FD S+   S+   + + S DE  +   +  NGP+AVA
Sbjct: 191 HDNGIMSESAYPYTAMDGN--CRFDASQSVTSLQGYYDIPSGDESALQDAVANNGPVAVA 248

Query: 288 INAV-YMQTYIGGVSCPYICS-RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           ++A   +Q Y GGV     CS + L+HGVL+VGYGS G        + YWI+KNSWG  W
Sbjct: 249 LDATEELQLYSGGVLYDTTCSAQALNHGVLVVGYGSEG-------GQDYWIVKNSWGSGW 301

Query: 346 GENGYYKICRGR-NVCGVDSMVS 367
           GE GY++  R R N CG+ +  S
Sbjct: 302 GEQGYWRQARNRNNNCGIATAAS 324


>gi|15593252|gb|AAL02222.1|AF410882_1 cysteine protease CP14 precursor [Frankliniella occidentalis]
          Length = 333

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 163/321 (50%), Gaps = 30/321 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA----THGITQFSDLTPA 114
           H+  FK    K YA+  E  +R  +FK N  R A+H     S       G  Q++D+   
Sbjct: 27  HWESFKATHAKTYANAVEEAYRAKVFKENAIRIAKHNDRFASGEVTFKVGYNQYADMHTH 86

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSF 171
           E      G R  L   K A       +ND        DWR KGAV P+KDQG CGSCWSF
Sbjct: 87  EVTEKLNGYRSGL---KQASAFVHTASNDSWPWSKKVDWRSKGAVTPIKDQGQCGSCWSF 143

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S TG+LEG  FL    LVSLSEQ LVDC  +   E       GCNGGLM+SAFEY    G
Sbjct: 144 SATGSLEGQLFLKNKNLVSLSEQNLVDCSWDFGNE-------GCNGGLMDSAFEYVKSNG 196

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINA 290
           G+  EE YPYT  D    C +  +  A     +  V +  E  +   + K GP++VAI+A
Sbjct: 197 GIDTEESYPYTAEDG--TCLYKAANNAGVNTGYKDVQAKSESALRDAVEKVGPVSVAIDA 254

Query: 291 V--YMQTYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
                Q Y  G+     CS   LDHGVL VGYGS          K +WI+KNSWG SWGE
Sbjct: 255 SNWSFQMYTSGIYYEPACSSDSLDHGVLAVGYGS------EWPNKEFWIVKNSWGTSWGE 308

Query: 348 NGYYKICRG-RNVCGVDSMVS 367
            GY K+ R  +N CG+ +  S
Sbjct: 309 EGYIKMARNKKNNCGIATEAS 329


>gi|357465603|ref|XP_003603086.1| Cysteine proteinase [Medicago truncatula]
 gi|355492134|gb|AES73337.1| Cysteine proteinase [Medicago truncatula]
          Length = 474

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/288 (40%), Positives = 162/288 (56%), Gaps = 25/288 (8%)

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR------RKLRL 129
           E D RF IFK NL+    H   + +   G+ +F+DL+  E+R  YLG +         R 
Sbjct: 71  EKDKRFEIFKDNLKFIDEHNAENRTYKVGLNRFADLSNEEYRSRYLGTKIDPIGMMMART 130

Query: 130 PKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLV 189
              +++      + LP   DWR +GAV  VKDQGSCGSCW+FST  A+EG N + TG+LV
Sbjct: 131 KTRSNRYAPSVGDKLPKSVDWRSQGAVVQVKDQGSCGSCWAFSTIAAVEGINKIVTGELV 190

Query: 190 SLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHA 249
           SLSEQ+LVDCD         + ++GC+GGLM  AFE+ +  GG+  +EDYPY G D G  
Sbjct: 191 SLSEQELVDCDR--------TVNAGCDGGLMEYAFEFIINNGGIDSDEDYPYRGVD-GKC 241

Query: 250 CKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICS 307
            ++ K+    S+ ++  V   ++      V N P++VAI A     Q Y+ G+     C 
Sbjct: 242 DQYKKNARVVSIDDYEQVPAYDELALKKAVANQPISVAIEAGGREFQLYVSGIFTGK-CG 300

Query: 308 RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
             LDHGV  VGYG+            YWI++NSWG+SWGE+GY ++ R
Sbjct: 301 TALDHGVTAVGYGTENGV-------DYWIVRNSWGKSWGESGYVRMER 341


>gi|221090861|ref|XP_002167224.1| PREDICTED: cathepsin L-like [Hydra magnipapillata]
          Length = 324

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 171/314 (54%), Gaps = 32/314 (10%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR--RTY 120
           +K   NK Y+   E   R+TI+K N RR   H          + QF D+T +EF+    Y
Sbjct: 30  WKMYHNKVYSHDGEETVRYTIWKDNERRIREHNLKGGDFLLKMNQFGDMTNSEFKAFNGY 89

Query: 121 LGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
           L         K  + +  L  N+   P   DWR +G V PVKDQG CGSCW+FSTTG+LE
Sbjct: 90  LS-------HKHVNGSTFLTPNNFVAPDTVDWRNEGYVTPVKDQGQCGSCWAFSTTGSLE 142

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G +F  TGKLVSLSEQ LVDC            ++GCNGGLM++AF Y  +  G+  E  
Sbjct: 143 GQHFKKTGKLVSLSEQNLVDC-------STAYGNNGCNGGLMDNAFTYIKENKGIDSEAS 195

Query: 239 YPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAVY--MQT 295
           YPYT  D    C F K  +AA+   F  +   +E+++   +   GP++VAI+A +   Q 
Sbjct: 196 YPYTAEDG--KCVFKKPSVAATDTGFVDLPEGNENKLKEAVASVGPISVAIDASHESFQF 253

Query: 296 YIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKIC 354
           Y  GV + P   S  LDHGVL+VGYG+          K YW++KNSW  SWG+ GY K+ 
Sbjct: 254 YSSGVYNEPSCSSTELDHGVLVVGYGTE-------SGKDYWLVKNSWNTSWGDKGYIKMR 306

Query: 355 R-GRNVCGVDSMVS 367
           R  +N CG+ +  S
Sbjct: 307 RNAKNQCGIATKAS 320


>gi|356582227|ref|NP_001239115.1| cathepsin L1 precursor [Canis lupus familiaris]
 gi|62899810|sp|Q9GL24.1|CATL1_CANFA RecName: Full=Cathepsin L1; Contains: RecName: Full=Cathepsin L1
           heavy chain; Contains: RecName: Full=Cathepsin L1 light
           chain; Flags: Precursor
 gi|10185020|emb|CAC08809.1| cathepsin L [Canis lupus familiaris]
          Length = 333

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/313 (39%), Positives = 163/313 (52%), Gaps = 23/313 (7%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQ----FSDLTPAEFRR 118
           +K    + Y   EE   R  +++ N++    H +      HG T     F D+T  EFR+
Sbjct: 32  WKATHRRLYGMNEEGWRR-AVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQ 90

Query: 119 TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALE 178
              G + +        Q P+    ++P   DWREKG V PVK+QG CGSCW+FS TGALE
Sbjct: 91  VMNGFQNQKHKKGKMFQEPLFA--EIPKSVDWREKGYVTPVKNQGQCGSCWAFSATGALE 148

Query: 179 GANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREED 238
           G  F  TGKLVSLSEQ LVDC            + GCNGGLM++AF Y    GGL  EE 
Sbjct: 149 GQMFRKTGKLVSLSEQNLVDCSR-------AQGNEGCNGGLMDNAFRYVKDNGGLDSEES 201

Query: 239 YPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--MQTY 296
           YPY G D    C +     AA+   F  +   E  +   +   GP++VAI+A +   Q Y
Sbjct: 202 YPYLGRDT-ETCNYKPECSAANDTGFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFY 260

Query: 297 IGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
             G+   P   S+ LDHGVL+VGYG  G          +WI+KNSWG  WG NGY K+ +
Sbjct: 261 KSGIYFDPDCSSKDLDHGVLVVGYGFEGTD----SNNKFWIVKNSWGPEWGWNGYVKMAK 316

Query: 356 GRNV-CGVDSMVS 367
            +N  CG+ +  S
Sbjct: 317 DQNNHCGIATAAS 329


>gi|355567966|gb|EHH24307.1| Cathepsin L2 [Macaca mulatta]
 gi|355753494|gb|EHH57540.1| Cathepsin L2 [Macaca fascicularis]
 gi|380790509|gb|AFE67130.1| cathepsin L2 preproprotein [Macaca mulatta]
          Length = 334

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/315 (41%), Positives = 168/315 (53%), Gaps = 26/315 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHG----ITQFSDLTPAEFRR 118
           +K    + Y + EE   R  +++ N++    H        HG    +  F D+T  EFR+
Sbjct: 32  WKATHRRLYGASEEGWRR-AVWEKNMKMIELHNGEYSQGKHGFAMAMNAFGDMTNEEFRQ 90

Query: 119 TYLGLR-RKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
                R +KLR  K   +   L   DLP   DWR+KG V PVK+Q  CGSCW+FS TGAL
Sbjct: 91  VMGCFRNQKLRKGKLFREPLFL---DLPKSVDWRKKGYVTPVKNQKQCGSCWAFSATGAL 147

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  F  TGKLVSLSEQ LVDC H   P+     + GCNGG MNSAF Y  + GGL  EE
Sbjct: 148 EGQMFRKTGKLVSLSEQNLVDCSH---PQG----NQGCNGGFMNSAFRYVKENGGLDSEE 200

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINAVY--MQ 294
            YPY   D    CK+      A+   F VV   +++     V   GP++VA++A +   Q
Sbjct: 201 SYPYVAMD--GICKYRPENSVANDTGFEVVPAGKEKALMKAVATVGPISVAMDAGHSSFQ 258

Query: 295 TYIGGVSC-PYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y  G+   P   S+ LDHGVL+VGYG  G          YW++KNSWG  WG NGY KI
Sbjct: 259 FYKSGIYFEPDCSSKNLDHGVLVVGYGFEG---ANSDNNKYWLVKNSWGPEWGSNGYVKI 315

Query: 354 CRGR-NVCGVDSMVS 367
            + + N CG+ +  S
Sbjct: 316 AKDKDNHCGIATAAS 330


>gi|38346003|emb|CAD40112.2| OSJNBa0035O13.5 [Oryza sativa Japonica Group]
 gi|125589427|gb|EAZ29777.1| hypothetical protein OsJ_13835 [Oryza sativa Japonica Group]
          Length = 339

 Score =  205 bits (522), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/330 (37%), Positives = 174/330 (52%), Gaps = 29/330 (8%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           +L+  E +++  + A H    + +++ + Y    E   RF IFKAN+         +   
Sbjct: 21  VLAAREQSDHAAMVARHE--RWMEQYGRVYKDATEKARRFEIFKANVAFIESFNAGNHKF 78

Query: 102 THGITQFSDLTPAEFRRTYLG---LRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGP 158
             G+ QF+DLT  EFR T      +   +R+P       +   + LPA  DWR KGAV P
Sbjct: 79  WLGVNQFADLTNYEFRATKTNKGFIPSTVRVPTTFRYENV-SIDTLPATVDWRTKGAVTP 137

Query: 159 VKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGG 218
           +KDQG CG CW+FS   A+EG   L+TGKL+SLSEQ+LVDCD   +       D GC GG
Sbjct: 138 IKDQGQCGCCWAFSAVAAMEGIVKLSTGKLISLSEQELVDCDVHGE-------DQGCEGG 190

Query: 219 LMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANL 278
           LM+ AF++ +K GGL  E  YPYT  D    C    S  AA++  +  V  + +      
Sbjct: 191 LMDDAFKFIIKNGGLTTESKYPYTAAD--GKCN-GGSNSAATIKGYEDVPANNEAALMKA 247

Query: 279 VKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           V N P++VA++   +  Q Y GGV     C   LDHG++ +GYG  G          YW+
Sbjct: 248 VANQPVSVAVDGGDMTFQFYSGGVMTGS-CGTDLDHGIVAIGYGKDG------DGTQYWL 300

Query: 337 IKNSWGESWGENGYYK----ICRGRNVCGV 362
           +KNSWG +WGENG+ +    I   R +CG+
Sbjct: 301 LKNSWGTTWGENGFLRMEKDISDKRGMCGL 330


>gi|111073715|dbj|BAF02546.1| triticain alpha [Triticum aestivum]
 gi|388890585|gb|AFK80346.1| cysteine endopeptidase EP alpha [Secale cereale x Triticum durum]
          Length = 461

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/327 (37%), Positives = 175/327 (53%), Gaps = 39/327 (11%)

Query: 42  ILSHHESTNNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA 101
           I+S+ E +  ++      ++ +  +  + Y +  E + RF +F+ NLR   +H     + 
Sbjct: 26  IVSYGERSEEEV---RRMYAEWMSEHRRTYNAIGEEERRFEVFRDNLRYIDQHNAAADAG 82

Query: 102 TH----GITQFSDLTPAEFRRTYLGLR------RKLRLPKDADQAPILPTNDLPADFDWR 151
            H    G+ +F+DLT  E+R TYLG R      RKL     AD        +LP   DWR
Sbjct: 83  LHSFRLGLNRFADLTNEEYRSTYLGARTKPDRERKLSARYQADD-----NEELPETVDWR 137

Query: 152 EKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSC 211
           +KGAV  +KDQG CGSCW+FS   A+EG N + TG ++ LSEQ+LVDCD         S 
Sbjct: 138 KKGAVAAIKDQGGCGSCWAFSAIAAVEGINQIVTGDMIPLSEQELVDCDT--------SY 189

Query: 212 DSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI-AASVANFSVVSLD 270
           + GCNGGLM+ AFE+ +  GG+  EEDYPY   +R + C  +K      ++  +  V ++
Sbjct: 190 NEGCNGGLMDYAFEFIINNGGIDSEEDYPY--KERDNRCDANKKNAKVVTIDGYEDVPVN 247

Query: 271 EDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIR 328
            ++     V N P++VAI A     Q Y  G+     C   LDHGV  VGYG+       
Sbjct: 248 SEKSLQKAVANQPISVAIEAGGRAFQLYKSGIFTG-TCGTALDHGVAAVGYGTE------ 300

Query: 329 LKEKPYWIIKNSWGESWGENGYYKICR 355
              K YW+++NSWG  WGE+GY ++ R
Sbjct: 301 -NGKDYWLVRNSWGTVWGEDGYIRMER 326


>gi|157779038|gb|ABV71063.1| cathepsin L3 precursor [Schistosoma mansoni]
 gi|360044915|emb|CCD82463.1| subfamily C1A unassigned peptidase (C01 family) [Schistosoma
           mansoni]
          Length = 370

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/336 (38%), Positives = 175/336 (52%), Gaps = 42/336 (12%)

Query: 51  NDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARH----QKLDPSATHGIT 106
           +D++ A   +  FK +F +AY    E   RF IF AN  +   H    Q+   +   G+ 
Sbjct: 54  DDIIAA---WKFFKIQFKRAYNGIHEETRRFFIFSANFVKMMEHNHAFQEGKVTYKMGVN 110

Query: 107 QFSDLTPAEFRR------TYLGLRRKLRLPKDADQAPILPTNDLPADFDWREKGAVGPVK 160
           +F+D T  E ++      T   +R K      ++         LP+  DWR +GAV  VK
Sbjct: 111 EFTDKTDYELKKLRGYKVTSGAIRHKGSTFIRSEHTK------LPSKVDWRREGAVTDVK 164

Query: 161 DQGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLM 220
           +QG CGSCW+FSTTGA+EG ++  T +LV+LSEQQLVDC            ++GC+GGLM
Sbjct: 165 NQGQCGSCWAFSTTGAIEGQHYRKTNRLVNLSEQQLVDCSKSYG-------NNGCSGGLM 217

Query: 221 NSAFEYTLKAGGLMREEDYPYTGTD--RGHACKFDKSKIAASVANF-SVVSLDEDQIAAN 277
           NSAFEY     G+  E  YPY   D    + C F+ S I A V  + ++   DE  +   
Sbjct: 218 NSAFEYVRDNEGIDSEISYPYVSGDGTENNRCLFNASNILAQVTGYVNIHEGDERALMDA 277

Query: 278 LVKNGPLAVAINAVY--MQTYIGGVSCPYICS---RRLDHGVLLVGYGSAGYAPIRLKEK 332
           +   GP++VAINA       Y  G+     C      LDHGVL+VGYG           +
Sbjct: 278 VATKGPVSVAINAGLPSFSMYKSGIYSDTDCEGTLDALDHGVLVVGYGEE-------NGR 330

Query: 333 PYWIIKNSWGESWGENGYYKICRG-RNVCGVDSMVS 367
            YW+IKNSWGE WGE GY KI +G  N+CGV S  S
Sbjct: 331 SYWLIKNSWGEEWGEKGYIKISKGSHNMCGVASAAS 366


>gi|351710879|gb|EHB13798.1| Cathepsin F [Heterocephalus glaber]
          Length = 482

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 181/320 (56%), Gaps = 37/320 (11%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDP-SATHGITQFSDLTPAEFRR 118
           F  F   +N+ Y S++E   R ++F  N+  A R Q LD  +A +G+T+FSDLT  EFR 
Sbjct: 185 FKNFVATYNRTYESKKEAQWRLSVFTRNMVLAQRIQALDHGTAQYGVTKFSDLTEEEFRT 244

Query: 119 TYLG--LR----RKLRLPKDA-DQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
            YL   LR    +K+ L K   D AP+        ++DWR+KGAV  VK+QG CGSCW+F
Sbjct: 245 IYLNPLLREEPGKKMHLAKAVRDPAPL--------EWDWRKKGAVTEVKNQGMCGSCWAF 296

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S TG +EG  FL  G L+SLSEQ+L+DCD           D  C GG  ++A+      G
Sbjct: 297 SVTGNVEGQWFLNRGTLLSLSEQELLDCD---------KMDKACMGGFPSNAYLAIKSLG 347

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV 291
           GL  E+DY Y G  +  AC F   K    + +   +S +E ++AA L   GP++VAINA 
Sbjct: 348 GLETEDDYSYQGHMK--ACNFSAKKAKVYINDSVELSKNEQKLAAWLAVKGPISVAINAF 405

Query: 292 YMQTYIGGVSCPY--ICSRR-LDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            MQ Y  G++ P   +CS   +DH +L+VGYG+           P+W IKNSWG  WGE 
Sbjct: 406 GMQFYRHGIAHPLRPLCSPWFIDHAMLVVGYGNR-------SNVPFWAIKNSWGTDWGEE 458

Query: 349 GYYKICRGRNVCGVDSMVST 368
           GYY + RG   CGV+ M S+
Sbjct: 459 GYYYLHRGSGACGVNIMASS 478


>gi|7381610|gb|AAF61565.1|AF227957_1 cathepsin L-like proteinase precursor [Rhipicephalus microplus]
          Length = 332

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 166/320 (51%), Gaps = 28/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K+Y S  E   RF IF  N     +  A++ K   S   G+ QF DL   
Sbjct: 26  QWEAFKTTHKKSYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF R + G     R    +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSTFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL  G+LVSLSEQ LVDC            ++GC GGLM  AF+Y     G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C+F K  + A+   +  + +  E  +   +   GP++VAI+A 
Sbjct: 198 IDTEKSYPYEAVDG--ECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDAS 255

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV   P   S  LDHGVL+VGYG  G        K YW++KNSW ESWG+ 
Sbjct: 256 HSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQ 308

Query: 349 GYYKICR-GRNVCGVDSMVS 367
           GY  + R   N CG+ S  S
Sbjct: 309 GYILMSRDNNNQCGIASQAS 328


>gi|402770517|gb|AFQ98393.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 165/320 (51%), Gaps = 28/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K Y S  E   RF IF  N     +  A++ K   S   G+ QF DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF R + G     R    +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL  G+LVSLSEQ LVDC            ++GC GGLM  AF+Y     G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C+F K  + A+   +  + +  E  +   +   GP++VAI+A 
Sbjct: 198 IDTEKSYPYKAVDG--ECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDAS 255

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV   P   S  LDHGVL+VGYG  G        K YW++KNSW ESWG+ 
Sbjct: 256 HSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQ 308

Query: 349 GYYKICR-GRNVCGVDSMVS 367
           GY  + R   N CG+ S  S
Sbjct: 309 GYILMSRDNNNQCGIASQAS 328


>gi|47524507|gb|AAT34987.1| putative cysteine protease [Gossypium hirsutum]
          Length = 344

 Score =  205 bits (522), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/307 (40%), Positives = 167/307 (54%), Gaps = 30/307 (9%)

Query: 69  KAYA-SQEEH-DHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLRRK 126
           + YA  QE+H + RF +FK N+ R         +    I QF+DLT  EFR +Y G +  
Sbjct: 46  RVYADEQEDHKNKRFNVFKENVERIEEFND-GKTFKLAINQFADLTNEEFRASYNGFKGP 104

Query: 127 LRLPKDADQ-APILPTN---DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANF 182
           + L     +  P    N    LP   DWR+KGAV PVK+QG CG CW+FS   A+EG   
Sbjct: 105 MVLSSQITKPTPFRYENVSSALPVSVDWRKKGAVTPVKNQGQCGCCWAFSAVAAIEGITQ 164

Query: 183 LATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYT 242
           ++TGKL+SLSEQ+LVDCD +         D GC GGLM++AFE+ +  GGL  E +YPY 
Sbjct: 165 ISTGKLISLSEQELVDCDTK-------GIDHGCEGGLMDTAFEFIINNGGLTTESNYPYK 217

Query: 243 GTDRGHACKFDKSK-IAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGG 299
           G D    C F+K+  IA S+  +  V  +++Q     V + P++VAI A     Q Y  G
Sbjct: 218 GED--GTCNFNKTNPIAVSITGYEDVPANDEQALMKAVAHQPVSVAIEAGGSDFQFYSSG 275

Query: 300 VSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR---- 355
           V     C   LDH V  VGYG +           YWI+KNSWG  WGE+GY ++ +    
Sbjct: 276 VFTGE-CGTELDHAVTAVGYGESEDG------SKYWIVKNSWGTKWGESGYIEMQKDIKV 328

Query: 356 GRNVCGV 362
            + +CG+
Sbjct: 329 KQGLCGI 335


>gi|297843430|ref|XP_002889596.1| hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335438|gb|EFH65855.1| hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 343

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/322 (38%), Positives = 177/322 (54%), Gaps = 33/322 (10%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEF 116
           +  F  + K  +K Y  ++E   RF I+++N++       L         +F+D+T +EF
Sbjct: 40  KQRFEKWLKTHSKLYGGRDEWMLRFGIYQSNVQLIDYINSLHLPFKLTDNRFADMTNSEF 99

Query: 117 RRTYLGLR-RKLRLPKDADQAPIL-PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTT 174
           +  +LGL    LRL K   Q P+  P  ++P   DWR +GAV P+++QG CG CW+FS  
Sbjct: 100 KAHFLGLNTSSLRLHKK--QRPVCDPAGNVPDAVDWRTQGAVTPIRNQGKCGGCWAFSAV 157

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
            A+EG N + TG LVSLSEQQL+DCD        G+ + GC+GGLM +AFE+    GGL 
Sbjct: 158 AAIEGINKIKTGNLVSLSEQQLIDCD-------VGTYNKGCSGGLMETAFEFIKSNGGLT 210

Query: 235 REEDYPYTGTDRGHACKFDKSK-IAASVANFSVVSLDED--QIAANLVKNGPLAVAINA- 290
            E DYPYTG +    C  +K+K    ++  +  V+ +E   QIAA      P++V I+A 
Sbjct: 211 TETDYPYTGIE--GTCDQEKAKNKVVTIQGYQKVAQNEASLQIAA---AQQPVSVGIDAG 265

Query: 291 -VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
               Q Y  GV   Y C   L+HGV +VGYG  G       ++ YWI+KNSWG  WGE G
Sbjct: 266 GFIFQLYSSGVFTSY-CGTNLNHGVTVVGYGVEG-------DQKYWIVKNSWGTGWGEEG 317

Query: 350 YYKICRG----RNVCGVDSMVS 367
           Y ++ RG       CG+  + S
Sbjct: 318 YIRMERGISEDTGKCGIAMLAS 339


>gi|224065647|ref|XP_002301901.1| predicted protein [Populus trichocarpa]
 gi|222843627|gb|EEE81174.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/329 (39%), Positives = 175/329 (53%), Gaps = 27/329 (8%)

Query: 49  TNNDLLGAEHHFSLFKK---KFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGI 105
           T  DL   +    LF+    K  K Y S EE   RF IFK NL       K   +   G+
Sbjct: 19  TPEDLTSGDKIIDLFESWISKHGKIYESIEEKWLRFEIFKDNLFHIDETNKKVVNYWLGL 78

Query: 106 TQFSDLTPAEFRRTYLGLRRKLRLPKDADQA-PILPTNDLPADFDWREKGAVGPVKDQGS 164
            +FSDL+  EF+  YLGL+  +   ++  Q         +P   DWR+KGAV  VK+QGS
Sbjct: 79  NEFSDLSHEEFKNKYLGLKVDMSERRECSQEFNYKDVMSIPKSVDWRKKGAVTDVKNQGS 138

Query: 165 CGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAF 224
           CGSCW+FST  A+EG N + TG L SLSEQ+LVDCD         + + GCNGGLM+ AF
Sbjct: 139 CGSCWAFSTVAAVEGINQIVTGNLTSLSEQELVDCDT--------TNNYGCNGGLMDYAF 190

Query: 225 EYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPL 284
            Y +  GGL +E DYPY   +     + ++S++  +++ +  V  + ++     + N PL
Sbjct: 191 SYIISNGGLHKEVDYPYIMEEGTCEMRKEESEV-VTISGYHDVPQNSEESLLKALANQPL 249

Query: 285 AVAINAVY--MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWG 342
           +VAI A     Q Y GGV   + C  +LDHGV  VGYGS            Y I+KNSWG
Sbjct: 250 SVAIEASGRDFQFYSGGVFDGH-CGTQLDHGVAAVGYGSTNGL-------DYIIVKNSWG 301

Query: 343 ESWGENGYYKICRGR----NVCGVDSMVS 367
             WGE GY ++ R       +CG++ M S
Sbjct: 302 SKWGEKGYIRMKRNTGKPAGLCGINKMAS 330


>gi|402770511|gb|AFQ98390.1| cathepsin L [Rhipicephalus microplus]
 gi|402770513|gb|AFQ98391.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 165/320 (51%), Gaps = 28/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K Y S  E   RF IF  N     +  A++ K   S   G+ QF DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF R + G     R    +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL  G+LVSLSEQ LVDC            ++GC GGLM  AF+Y     G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C+F K  + A+   +  + +  E  +   +   GP++VAI+A 
Sbjct: 198 IDTEKSYPYEAVDG--ECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDAS 255

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV   P   S  LDHGVL+VGYG  G        K YW++KNSW ESWG+ 
Sbjct: 256 HSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQ 308

Query: 349 GYYKICR-GRNVCGVDSMVS 367
           GY  + R   N CG+ S  S
Sbjct: 309 GYILMSRDNNNQCGIASQAS 328


>gi|440792185|gb|ELR13413.1| cathepsin L, putative [Acanthamoeba castellanii str. Neff]
          Length = 331

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/316 (37%), Positives = 165/316 (52%), Gaps = 22/316 (6%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANL-RRAARHQKLDPSATHGITQFSDLTPAEF 116
             F+ F +++ K+YAS EE + RF IF  NL   AA + K +     GIT+F+D++  EF
Sbjct: 32  EQFNAFVQRYGKSYASAEEAEQRFAIFTQNLAETAALNIKYEGKTQFGITKFADMSQEEF 91

Query: 117 RRTYLGLRRKLRLPKDADQAPILPTNDLPADFDWREK-GAVGPVKDQGSCGSCWSFSTTG 175
           +   L         +   + P       P+ FDWR K G V PV DQG CGSCW+FS T 
Sbjct: 92  QSRVLMSNPPPPPTEKPYRGPKFEGFTAPSTFDWRNKPGVVTPVYDQGQCGSCWAFSATE 151

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
            +E    LA  KL  LS QQ+VDC            D GC GG  + A++Y + A GL  
Sbjct: 152 NIESQWALAGHKLTGLSMQQIVDCSW---------WDDGCGGGFPSYAYDYVIDAPGLDA 202

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLD--EDQIAANLVKNGPLAVAINAVYM 293
             +YPYT    G +C F +S++ A +++++  + D  E Q+A  L ++GP++V ++A   
Sbjct: 203 LANYPYTAV--GGSCAFKESQVVAKISSWTYTTTDSNEHQMANYLAQHGPISVCVDAESW 260

Query: 294 QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            +Y GGV     C   +DH VL VGY             PYWII+NSWG SWG  GY  +
Sbjct: 261 PSYTGGVYRASACGTSIDHCVLAVGYN-------LTANPPYWIIRNSWGTSWGLEGYMHL 313

Query: 354 CRGRNVCGVDSMVSTV 369
             G + C V  M ++ 
Sbjct: 314 EFGTDACAVAEMTTSA 329


>gi|22759715|dbj|BAC10906.1| cysteine proteinase [Zinnia elegans]
          Length = 352

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/318 (39%), Positives = 175/318 (55%), Gaps = 26/318 (8%)

Query: 58  HHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFR 117
           H F  +  K +K Y S +E  HRF IF  NL+      K   +   G+ +F+DLT  EF+
Sbjct: 47  HLFESWLVKHSKFYESLDEKLHRFEIFMDNLKHIDETNKKVSNYWLGLNEFADLTHEEFK 106

Query: 118 RTYLGLRRKLRLPKDADQAPILPTN--DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTG 175
             +LG + +L   KD         +  DLP   DWR+KGAV PVK+QG CGSCW+FST  
Sbjct: 107 HKFLGFKGELAERKDESSKEFGYRDFVDLPKSVDWRKKGAVAPVKNQGQCGSCWAFSTVA 166

Query: 176 ALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMR 235
           A+EG N + TG L  LSEQ+L+DCD         + ++GCNGGLM+ AF Y +++ GL +
Sbjct: 167 AVEGINQIVTGNLTMLSEQELIDCD--------TTFNNGCNGGLMDYAFAYVMRS-GLHK 217

Query: 236 EEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAVY--M 293
           EE+YPY  ++     K D S+   +++ +  V  +++      + N P++VAI A     
Sbjct: 218 EEEYPYIMSEGTCDEKKDVSE-KVTISGYHDVPRNDEASFLKALANQPISVAIEASGRDF 276

Query: 294 QTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
           Q Y GGV   + C   LDHGV  VGYG+        K   Y I++NSWG  WGE GY ++
Sbjct: 277 QFYSGGVFDGH-CGTELDHGVAAVGYGTT-------KGLDYVIVRNSWGPKWGEKGYIRM 328

Query: 354 CRG----RNVCGVDSMVS 367
            RG      +CG+  M S
Sbjct: 329 KRGSGKPHGMCGLYMMAS 346


>gi|402770515|gb|AFQ98392.1| cathepsin L [Rhipicephalus microplus]
          Length = 332

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 165/320 (51%), Gaps = 28/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKAN----LRRAARHQKLDPSATHGITQFSDLTPA 114
            +  FK    K Y S  E   RF IF  N     +  A++ K   S   G+ QF DL   
Sbjct: 26  QWEAFKTTHKKTYQSHMEELLRFKIFTENSLIIAKHNAKYAKGLVSYKLGMNQFGDLLAH 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTND--LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           EF R + G     R    +   P    ND  LP   DWR+KGAV PVKDQG CGSCW+FS
Sbjct: 86  EFARIFNG-HHGTRKTGGSSFLPPANVNDSSLPKVVDWRKKGAVTPVKDQGQCGSCWAFS 144

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG +FL  G+LVSLSEQ LVDC            ++GC GGLM  AF+Y     G
Sbjct: 145 ATGSLEGQHFLKNGELVSLSEQNLVDCSQSFG-------NNGCEGGLMEDAFKYIKANDG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E+ YPY   D    C+F K  + A+   +  + +  E  +   +   GP++VAI+A 
Sbjct: 198 IDTEKSYPYEAVDG--ECRFKKEDVGATDTGYVEIKAGSEVDLKKAVATVGPISVAIDAS 255

Query: 292 Y--MQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
           +   Q Y  GV   P   S  LDHGVL+VGYG  G        K YW++KNSW ESWG+ 
Sbjct: 256 HSSFQLYSEGVYDEPECSSEDLDHGVLVVGYGVKG-------GKKYWLVKNSWAESWGDQ 308

Query: 349 GYYKICR-GRNVCGVDSMVS 367
           GY  + R   N CG+ S  S
Sbjct: 309 GYILMSRDNNNQCGIASQAS 328


>gi|302796898|ref|XP_002980210.1| hypothetical protein SELMODRAFT_153766 [Selaginella moellendorffii]
 gi|300151826|gb|EFJ18470.1| hypothetical protein SELMODRAFT_153766 [Selaginella moellendorffii]
          Length = 479

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 129/304 (42%), Positives = 166/304 (54%), Gaps = 32/304 (10%)

Query: 76  EHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR---RKLRLPKD 132
           E   R+ IFK NLR      + +     G+  F+DLT  EFR    G R    + R   +
Sbjct: 81  EKATRYGIFKDNLRFIHGENEKNQGYFLGLNAFADLTNEEFRAQRHGGRFDRSRERTSHE 140

Query: 133 ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGKLVSLS 192
             +   +   DLP   DWREKGAV  VKDQGSCGSCW+FS   A+EG N LATG+LVSLS
Sbjct: 141 EFRYGSVQLKDLPDSIDWREKGAVVGVKDQGSCGSCWAFSAVAAIEGVNKLATGELVSLS 200

Query: 193 EQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRGHACKF 252
           EQ+LVDCD           D GCNGGLM+ AF + +K GGL  E DYPY    +G+  + 
Sbjct: 201 EQELVDCDK--------GEDEGCNGGLMDYAFGFVIKNGGLDTEADYPY----KGYGTRC 248

Query: 253 DKSKIAASVAN---FSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIGGVSCPYICS 307
           D+SK+ A V     +  V ++++      V + P++VAI+A    MQ Y  G+     C 
Sbjct: 249 DRSKMNAKVVTIDGYEDVPVNDETALLKAVAHQPVSVAIDAGGSSMQFYRSGIFTGR-CG 307

Query: 308 RRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRGR----NVCGVD 363
             LDHGV  VGYG       +   K YWIIKNSWG +WGE GY K+ R       +CG++
Sbjct: 308 TDLDHGVTNVGYG-------KEDGKAYWIIKNSWGSNWGEKGYVKMARNTGLAAGLCGIN 360

Query: 364 SMVS 367
              S
Sbjct: 361 MEAS 364


>gi|302816909|ref|XP_002990132.1| hypothetical protein SELMODRAFT_428615 [Selaginella moellendorffii]
 gi|300142145|gb|EFJ08849.1| hypothetical protein SELMODRAFT_428615 [Selaginella moellendorffii]
          Length = 358

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 171/306 (55%), Gaps = 20/306 (6%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARH-QKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
           + Y    E + RF IF+ N      H ++++ +   G+  F+D+T  EF+  Y G +  L
Sbjct: 43  RVYNGIGEKERRFQIFRDNAEYIEEHNRQVNQTYWLGLNNFADMTHDEFKALYFGTKVPL 102

Query: 128 RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
                +       TN LP D DWR KGAV  VK+QG+CGSCW+FST  A+EG N + TG+
Sbjct: 103 SNTIKSGFRYEDATN-LPLDTDWRSKGAVATVKNQGACGSCWAFSTVAAVEGVNQIVTGE 161

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           LVSLSEQ+LVDCD +         + GCNGGLM+SAFE+ ++ GGL  E DYPY     G
Sbjct: 162 LVSLSEQELVDCDKQ--------KNQGCNGGLMDSAFEFIIQNGGLDSEADYPYKAVS-G 212

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYI 305
              +  ++    ++  F  V  + +      V N P++VAI A     Q Y GGV   + 
Sbjct: 213 SCDESRRNSHVVTIDGFEDVPAESEADLLKAVANQPVSVAIEASGRNFQLYSGGVYTGH- 271

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG----RNVCG 361
           C   LDHGV+ VGYG++   P  +    YWI++NSWG++WGE+GY ++ R     R  CG
Sbjct: 272 CGYELDHGVVAVGYGTSK-TPDGVA-TDYWIVRNSWGDAWGESGYIRLQRNVASSRGKCG 329

Query: 362 VDSMVS 367
           +  M S
Sbjct: 330 IAMMAS 335


>gi|156739281|ref|NP_001096588.1| cathepsin L1-like precursor [Danio rerio]
 gi|166158351|ref|NP_001107526.1| uncharacterized protein LOC100135391 precursor [Xenopus (Silurana)
           tropicalis]
 gi|326672305|ref|XP_003199634.1| PREDICTED: cathepsin L1-like [Danio rerio]
 gi|156230096|gb|AAI52237.1| MGC174155 protein [Danio rerio]
 gi|163916362|gb|AAI57707.1| LOC100135391 protein [Xenopus (Silurana) tropicalis]
          Length = 335

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/320 (38%), Positives = 170/320 (53%), Gaps = 26/320 (8%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLTPA 114
           H++ +K +  K+Y    E   R  I++ NLR+  +H        H    G+ QF D+T  
Sbjct: 27  HWNSWKSQHGKSYHEDVEVGRRM-IWEENLRKIEQHNFEYSYGNHTFKMGMNQFGDMTNE 85

Query: 115 EFRRTYLGLRRKLRLPKDADQAPILPTNDL---PADFDWREKGAVGPVKDQGSCGSCWSF 171
           EFR+   G +     P    Q P+         P   DWR++G V PVKDQ  CGSCWSF
Sbjct: 86  EFRQAMNGYKHD---PNRTSQGPLFMEPSFFAAPQQVDWRQRGYVTPVKDQKQCGSCWSF 142

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           S+TGALEG  F  TGKL+S+SEQ LVDC     P+     + GCNGG+M+ AF+Y  +  
Sbjct: 143 SSTGALEGQLFRKTGKLISMSEQNLVDCSR---PQG----NQGCNGGIMDQAFQYVKENK 195

Query: 232 GLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN-GPLAVAINA 290
           GL  E+ YPY   D    C++D     A +  F  +    +    N V   GP++VAI+A
Sbjct: 196 GLDSEQSYPYLARD-DLPCRYDPRFNVAKITGFVDIPRGNELALMNAVAAVGPVSVAIDA 254

Query: 291 VY--MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
            +  +Q Y  G+     C+ RLDH VL+VGY   GY    +    YWI+KNSW + WG+ 
Sbjct: 255 SHQSLQFYQSGIYYERACTSRLDHAVLVVGY---GYQGADVAGNRYWIVKNSWSDKWGDK 311

Query: 349 GYYKICRGRNV-CGVDSMVS 367
           GY  + + +N  CG+ +M S
Sbjct: 312 GYIYMAKDKNNHCGIATMAS 331


>gi|30141027|dbj|BAC75927.1| cysteine protease-5 [Helianthus annuus]
          Length = 365

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/325 (38%), Positives = 176/325 (54%), Gaps = 36/325 (11%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDPSATHGITQFSDLTPAEFRR 118
           + L+  +  K Y +  E + RF IF  NL+    H    + S   G+ QF+DLT  E+R 
Sbjct: 36  YELWLARHGKTYNALGEKESRFRIFADNLKFIDEHNLSGNRSYKVGLNQFADLTNEEYRS 95

Query: 119 TYLG-----LRR--KLRLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSF 171
            YLG      RR  K++  + + +  +      PA  DWRE+GAV PVK+QG CGSCW+F
Sbjct: 96  MYLGTKVDPYRRIAKMQRGEISRRYAVQENEMFPAKVDWRERGAVSPVKNQGGCGSCWAF 155

Query: 172 STTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAG 231
           ST  ++EG N + TG L+SLSEQ+LVDCD++         +SGCNGG M+ AF++ +  G
Sbjct: 156 STVASVEGINKIVTGDLISLSEQELVDCDNK--------YNSGCNGGSMDYAFQFIVSNG 207

Query: 232 GLMREEDYPYTGTDRGHACK--FDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN 289
           G+  E DYPY G   G  C    +K+KI  S+  +  V    ++     V + P++V I 
Sbjct: 208 GIDSESDYPYKGV--GAVCDPVRNKAKI-VSIDGYEDVPPMNEKALMKAVAHQPVSVGIE 264

Query: 290 AV--YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGE 347
           A     Q Y  GV     C   LDHGV++VGYGS          K YWI++NSWG  WGE
Sbjct: 265 ASGRAFQLYTSGVLTGS-CGTNLDHGVVVVGYGSE-------NGKDYWIVRNSWGPEWGE 316

Query: 348 NGYYKICRGR-----NVCGVDSMVS 367
           +GY ++ R        +CG+  M S
Sbjct: 317 DGYIRMERNMVDTPVGMCGITLMAS 341


>gi|109082090|ref|XP_001108862.1| PREDICTED: cathepsin H isoform 2 [Macaca mulatta]
          Length = 335

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/318 (37%), Positives = 171/318 (53%), Gaps = 31/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  +  K +K Y+++E H HR   F +N R+   H   + +    + QFSD++ AE + 
Sbjct: 34  HFKSWMSKHHKTYSTEEYH-HRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKH 92

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTT 174
            YL        P++        +  T   P   DWR+KG  V PVK+QG+CGSCW+FSTT
Sbjct: 93  KYL-----WSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTT 147

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +ATGK++SL+EQQLVDC  + +       + GC GGL + AFEY L   G+M
Sbjct: 148 GALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNKGIM 200

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G D    CKF   K    V + + +++ DE+ +   +    P++ A      
Sbjct: 201 GEDTYPYQGKDGD--CKFRPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQD 258

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  G+     C +   +++H VL VGYG            PYWI+KNSWG  WG NG
Sbjct: 259 FMIYKTGIYSSTSCHKTPDKVNHAVLAVGYGEE-------NGIPYWIVKNSWGPQWGMNG 311

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG+N+CG+ +  S
Sbjct: 312 YFLIERGKNMCGLAACAS 329


>gi|238006338|gb|ACR34204.1| unknown [Zea mays]
          Length = 465

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 176/326 (53%), Gaps = 40/326 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHG----ITQFSDLTPAE 115
           + L+  +  +AY +  E D RF +F  NLR    H   + +A HG    + QF+DLT  E
Sbjct: 52  YELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHN--ERAAEHGFRLGMNQFADLTNDE 109

Query: 116 FRRTYLGLRRKLRLPKDADQAPILP--------TNDLPADFDWREKGAVGPVKDQGSCGS 167
           FR  YLG R    +P    +   +           +LP   DWREKGAV PVK+QG CGS
Sbjct: 110 FRAAYLGAR----IPASRRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGS 165

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CW+FS   ++E  N + TG++V+LSEQ+LV+C  +         +SGCNGGLM++AF++ 
Sbjct: 166 CWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTD-------GGNSGCNGGLMDAAFDFI 218

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
           +K GG+  E DYPY   D       + +K+  S+  F  V  ++++     V + P++VA
Sbjct: 219 IKNGGIDTEGDYPYKAVDGKCDINRENAKV-VSIDGFEDVPENDEKSLQKAVAHQPVSVA 277

Query: 288 INA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           I A     Q Y  GV     C+  LDHGV+ VGYG+          K YWI++NSWG  W
Sbjct: 278 IEAGGREFQLYKAGVF-TGTCTTNLDHGVVAVGYGTE-------NGKDYWIVRNSWGAKW 329

Query: 346 GENGYYKICRGRNV----CGVDSMVS 367
           GE+GY ++ R  N     CG+  M S
Sbjct: 330 GEDGYIRMERNVNATTGKCGIAMMAS 355


>gi|449469929|ref|XP_004152671.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
 gi|449529596|ref|XP_004171784.1| PREDICTED: cysteine proteinase RD21a-like [Cucumis sativus]
          Length = 431

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 178/322 (55%), Gaps = 38/322 (11%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA-THGITQFSDLTPAEFRR 118
           F ++  +  K+Y+S EE  +R  +F  N      H  LD S+ T  +  ++DLT  EF+ 
Sbjct: 29  FEIWCTEHGKSYSSAEEKLYRLGVFADNYEFVTHHNNLDNSSYTLSLNSYADLTHHEFKV 88

Query: 119 TYLGLRRKLR-----LPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFST 173
           + LG    LR     LP    Q P LP  D+P   DWR+KGAV  VKDQGSCG+CWSFS 
Sbjct: 89  SRLGFSPALRNFRPVLP----QEPSLP-RDVPDSLDWRKKGAVTAVKDQGSCGACWSFSA 143

Query: 174 TGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGL 233
           TGA+EG N + TG L+SLSEQ+L+DCD         S +SGC GGLM+ A+++ +   G+
Sbjct: 144 TGAMEGINQIMTGSLISLSEQELIDCDR--------SYNSGCGGGLMDYAYQFVISNHGI 195

Query: 234 MREEDYPYTGTDRGHACKFDK-SKIAASVANFSVVSLDEDQIAANLVKNGPLAVAI--NA 290
             E DYPY   D   +C+ DK  +   ++  ++ +  +++      V   P++V I  + 
Sbjct: 196 DTENDYPYQARD--GSCRKDKLQRNVVTIDGYADIPSNDEGKLLQAVAAQPVSVGICGSE 253

Query: 291 VYMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Q Y  G+ S P  CS  LDH VL+VGYGS            YWI+KNSWG+SWG +G
Sbjct: 254 RAFQLYSKGIFSGP--CSTSLDHAVLIVGYGSENGV-------DYWIVKNSWGKSWGMDG 304

Query: 350 YYKICRG----RNVCGVDSMVS 367
           Y  + R       VCG++ + S
Sbjct: 305 YMHMQRNSGNSEGVCGINKLAS 326


>gi|302816222|ref|XP_002989790.1| hypothetical protein SELMODRAFT_184826 [Selaginella moellendorffii]
 gi|300142356|gb|EFJ09057.1| hypothetical protein SELMODRAFT_184826 [Selaginella moellendorffii]
          Length = 358

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 171/306 (55%), Gaps = 20/306 (6%)

Query: 69  KAYASQEEHDHRFTIFKANLRRAARH-QKLDPSATHGITQFSDLTPAEFRRTYLGLRRKL 127
           + Y    E + RF IF+ N      H ++++ +   G+  F+D+T  EF+  Y G +  L
Sbjct: 43  RVYNGIGEKERRFQIFRDNAEYIEEHNRQVNQTYWLGLNNFADMTHDEFKALYFGTKVPL 102

Query: 128 RLPKDADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGANFLATGK 187
                +       TN LP D DWR KGAV  VK+QG+CGSCW+FST  A+EG N + TG+
Sbjct: 103 SNTIKSGFRYKDATN-LPLDTDWRSKGAVATVKNQGACGSCWAFSTVAAVEGVNQIVTGE 161

Query: 188 LVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPYTGTDRG 247
           LVSLSEQ+LVDCD +         + GCNGGLM+SAFE+ ++ GGL  E DYPY     G
Sbjct: 162 LVSLSEQELVDCDKQ--------KNQGCNGGLMDSAFEFIIQNGGLDSEADYPYKAVS-G 212

Query: 248 HACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINAV--YMQTYIGGVSCPYI 305
              +  ++    ++  F  V  + +      V N P++VAI A     Q Y GGV   + 
Sbjct: 213 SCDESRRNSHVVTIDGFEDVPAESEADLLKAVANQPVSVAIEASGRNFQLYSGGVYTGH- 271

Query: 306 CSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICRG----RNVCG 361
           C   LDHGV+ VGYG++   P  +    YWI++NSWG++WGE+GY ++ R     R  CG
Sbjct: 272 CGYELDHGVVAVGYGTSK-TPDGVA-TDYWIVRNSWGDAWGESGYIRLQRNVASPRGKCG 329

Query: 362 VDSMVS 367
           +  M S
Sbjct: 330 IAMMAS 335


>gi|167833701|gb|ACA02577.1| cathepsin [Spodoptera frugiperda MNPV]
          Length = 340

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 178/322 (55%), Gaps = 24/322 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAE 115
           A  +F  F  ++NK Y S++E  +R+ IF+ N+    +    + SA + I +F+D+T  E
Sbjct: 39  APLYFEKFIAQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMTKNE 98

Query: 116 FRRTYLGLRRKLRLPKDADQAPIL---PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
               + GL     L  +  +  ++        PA+FDWR    V  VKDQG CG+CW+F+
Sbjct: 99  IVIRHTGLASG-ELGANFCETVVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCGACWAFA 157

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
             GALE    +   +L+ L+EQQLVDCD           D GC+GGL+++A+E  ++ GG
Sbjct: 158 GLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMRMGG 208

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAV 291
           + +E DYPY    +   C     K AA V N +  V ++E+++   L   GP+A+A++AV
Sbjct: 209 VEQEFDYPYKAERQ--PCALKPHKFAAGVRNCYRYVLMNEERLEDLLRYVGPIAIAVDAV 266

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            +  Y GG+   +  +  L+H VLLVGYG            PYWIIKNSWG  +GE+GY 
Sbjct: 267 DLTDYYGGI-VSFCKNNGLNHAVLLVGYGVE-------NNVPYWIIKNSWGSDYGEDGYV 318

Query: 352 KICRGRNVCGVDSMVSTVAAAV 373
           ++ RG N CG+ + +++ A  +
Sbjct: 319 RVRRGVNSCGMINELASSAQVI 340


>gi|125860143|ref|YP_001036312.1| viral cathepsin [Spodoptera frugiperda MNPV]
 gi|120969288|gb|ABM45731.1| viral cathepsin [Spodoptera frugiperda MNPV]
 gi|319997353|gb|ADV91251.1| V-CATH [Spodoptera frugiperda MNPV]
 gi|384087478|gb|AFH58958.1| v-cath [Spodoptera frugiperda MNPV]
          Length = 339

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 178/322 (55%), Gaps = 24/322 (7%)

Query: 56  AEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAE 115
           A  +F  F  ++NK Y S++E  +R+ IF+ N+    +    + SA + I +F+D+T  E
Sbjct: 38  APLYFEKFIAQYNKQYKSEDEKKYRYNIFRHNIESINQKNSRNDSAVYKINRFADMTKNE 97

Query: 116 FRRTYLGLRRKLRLPKDADQAPIL---PTNDLPADFDWREKGAVGPVKDQGSCGSCWSFS 172
               + GL     L  +  +  ++        PA+FDWR    V  VKDQG CG+CW+F+
Sbjct: 98  IVIRHTGLASG-ELGANFCETVVVDGPAQRQRPANFDWRTLNKVTSVKDQGMCGACWAFA 156

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
             GALE    +   +L+ L+EQQLVDCD           D GC+GGL+++A+E  ++ GG
Sbjct: 157 GLGALESQYAIKYDRLIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMRMGG 207

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVAN-FSVVSLDEDQIAANLVKNGPLAVAINAV 291
           + +E DYPY    +   C     K AA V N +  V ++E+++   L   GP+A+A++AV
Sbjct: 208 VEQEFDYPYKAERQ--PCALKPHKFAAGVRNCYRYVLMNEERLEDLLRYVGPIAIAVDAV 265

Query: 292 YMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYY 351
            +  Y GG+   +  +  L+H VLLVGYG            PYWIIKNSWG  +GE+GY 
Sbjct: 266 DLTDYYGGI-VSFCKNNGLNHAVLLVGYGVE-------NNVPYWIIKNSWGSDYGEDGYV 317

Query: 352 KICRGRNVCGVDSMVSTVAAAV 373
           ++ RG N CG+ + +++ A  +
Sbjct: 318 RVRRGVNSCGMINELASSAQVI 339


>gi|9630063|ref|NP_046281.1| cathepsin [Orgyia pseudotsugata MNPV]
 gi|2499880|sp|O10364.1|CATV_NPVOP RecName: Full=Viral cathepsin; Short=V-cath; AltName: Full=Cysteine
           proteinase; Short=CP; Flags: Precursor
 gi|7435821|pir||T10394 cathepsin - Orgyia pseudotsugata nuclear polyhedrosis virus
 gi|1911371|gb|AAC59124.1| cathepsin [Orgyia pseudotsugata MNPV]
          Length = 324

 Score =  205 bits (521), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/324 (36%), Positives = 179/324 (55%), Gaps = 30/324 (9%)

Query: 52  DLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDL 111
           DLL A ++F  F  KFNK Y+S+ E  HRF IF+ NL       + D +A + I +FSDL
Sbjct: 20  DLLKAPNYFEDFLHKFNKNYSSESEKLHRFKIFQHNLEEIINKNQNDSTAQYEINKFSDL 79

Query: 112 TPAEFRRTYLGLRRKLRLPKDAD---QAPIL--PTNDLPADFDWREKGAVGPVKDQGSCG 166
           +  E    Y GL     LP       +  IL  P +  P +FDWR+   V  VK+QG CG
Sbjct: 80  SKEEAISKYTGLS----LPHQTQNFCEVVILDRPPDRGPLEFDWRQFNKVTSVKNQGVCG 135

Query: 167 SCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEY 226
           +CW+F+T G+LE    +   +L++LSEQQ +DCD           ++GC+GGL+++AFE 
Sbjct: 136 ACWAFATLGSLESQFAIKYNRLINLSEQQFIDCDR---------VNAGCDGGLLHTAFES 186

Query: 227 TLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLA 285
            ++ GG+  E DYPY  T  G  C+ + ++    V +    + + E+++   L   GP+ 
Sbjct: 187 AMEMGGVQMESDYPYE-TANGQ-CRINPNRFVVGVRSCRRYIVMFEEKLKDLLRAVGPIP 244

Query: 286 VAINAVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           VAI+A  +  Y  G+      +  L+H VLLVGY             PYWI+KN+WG  W
Sbjct: 245 VAIDASDIVNYRRGIM-RQCANHGLNHAVLLVGYAVEN-------NIPYWILKNTWGTDW 296

Query: 346 GENGYYKICRGRNVCGV-DSMVST 368
           GE+GY+++ +  N CG+ + +VS+
Sbjct: 297 GEDGYFRVQQNINACGIRNELVSS 320


>gi|414584879|tpg|DAA35450.1| TPA: cysteine protease 1 [Zea mays]
          Length = 522

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/326 (38%), Positives = 176/326 (53%), Gaps = 40/326 (12%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHG----ITQFSDLTPAE 115
           + L+  +  +AY +  E D RF +F  NLR    H   + +A HG    + QF+DLT  E
Sbjct: 109 YELWLAEHGRAYNALGERDRRFRVFWDNLRFVDAHN--ERAAEHGFRLGMNQFADLTNDE 166

Query: 116 FRRTYLGLRRKLRLPKDADQAPILP--------TNDLPADFDWREKGAVGPVKDQGSCGS 167
           FR  YLG R    +P    +   +           +LP   DWREKGAV PVK+QG CGS
Sbjct: 167 FRAAYLGAR----IPASRRRGTAVGERYRHGGGAEELPESVDWREKGAVAPVKNQGQCGS 222

Query: 168 CWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYT 227
           CW+FS   ++E  N + TG++V+LSEQ+LV+C  +         +SGCNGGLM++AF++ 
Sbjct: 223 CWAFSAVSSVESVNQIVTGEMVTLSEQELVECSTD-------GGNSGCNGGLMDAAFDFI 275

Query: 228 LKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVA 287
           +K GG+  E DYPY   D       + +K+  S+  F  V  ++++     V + P++VA
Sbjct: 276 IKNGGIDTEGDYPYKAVDGKCDINRENAKV-VSIDGFEDVPENDEKSLQKAVAHQPVSVA 334

Query: 288 INA--VYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESW 345
           I A     Q Y  GV     C+  LDHGV+ VGYG+          K YWI++NSWG  W
Sbjct: 335 IEAGGREFQLYKAGVF-TGTCTTNLDHGVVAVGYGTE-------NGKDYWIVRNSWGAKW 386

Query: 346 GENGYYKICRGRNV----CGVDSMVS 367
           GE+GY ++ R  N     CG+  M S
Sbjct: 387 GEDGYIRMERNVNATTGKCGIAMMAS 412


>gi|390368662|ref|XP_780781.2| PREDICTED: cathepsin L-like [Strongylocentrotus purpuratus]
          Length = 333

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/320 (40%), Positives = 172/320 (53%), Gaps = 30/320 (9%)

Query: 60  FSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQ-KLDP---SATHGITQFSDLTPAE 115
           ++ +K +  K Y S EE   R  I++ NL    +H  K D    +   G+ QF+DL   E
Sbjct: 28  WNQWKNEHGKRYLSDEEEASRKLIWEKNLDIVIKHNLKYDLGHFTYALGMNQFADLQNEE 87

Query: 116 FRRTYLGLRRKLRLPKDADQAPILPTND---LPADFDWREKGAVGPVKDQGSCGSCWSFS 172
           F     G R      K A  +  LP+N+   LP   DWR KG V PVKDQG CGSCW+FS
Sbjct: 88  FVAMMTGFRVN-GTSKAAKGSTFLPSNNVDKLPKTVDWRTKGYVTPVKDQGQCGSCWAFS 146

Query: 173 TTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGG 232
            TG+LEG  F  TGKLVSLSEQ LVDC +          + GC+GG M+ AF+Y + AGG
Sbjct: 147 ATGSLEGQQFKKTGKLVSLSEQNLVDCSYR---------NYGCHGGFMDRAFQYIIDAGG 197

Query: 233 LMREEDYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAV 291
           +  E  Y Y   D    C F K+ + A+V  ++ V S  E  +   +   GP++VAI+A 
Sbjct: 198 IDTEATYSYRAVDGN--CHFKKANVGATVTGYTDVTSGSEKALQKAVAHIGPISVAIDAS 255

Query: 292 --YMQTYIGGV-SCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGEN 348
             + + Y  GV + P   + RL H VL+VGYG+            YWI+KNSW ++WG N
Sbjct: 256 HKFFKFYKSGVYNEPGCSTTRLGHAVLVVGYGTTS------DGTDYWIVKNSWAKTWGMN 309

Query: 349 GYYKICRGR-NVCGVDSMVS 367
           GY  + R + N CG+ S  S
Sbjct: 310 GYLWMSRNKDNQCGIASEAS 329


>gi|144905116|dbj|BAF56430.1| cysteine proteinase [Lotus japonicus]
          Length = 341

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/297 (41%), Positives = 161/297 (54%), Gaps = 27/297 (9%)

Query: 66  KFNKAYASQEEHDHRFTIFKANLRR-AARHQKLDPSATHGITQFSDLTPAEFRRTYLGLR 124
           ++ K Y    E + R  IFK N++R  A +   + S   GI QF+DLT  EF+      R
Sbjct: 45  QYGKVYKDSYEKELRSKIFKENVQRIEAFNNAGNKSYKLGINQFADLTNEEFKARN---R 101

Query: 125 RKLRLPKDADQAPILP---TNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGALEGAN 181
            K  +  ++ + P         +PA  DWR+KGAV P+KDQG CG CW+FS   A EG  
Sbjct: 102 FKGHMCSNSTRTPTFKYEHVTSVPASLDWRQKGAVTPIKDQGQCGCCWAFSAVAATEGIT 161

Query: 182 FLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREEDYPY 241
            L+TGKL+SLSEQ+LVDCD +         D GC GGLM+ AF++ ++  GL  E  YPY
Sbjct: 162 KLSTGKLISLSEQELVDCDTK-------GVDQGCEGGLMDDAFKFIMQNKGLNTEAKYPY 214

Query: 242 TGTDRGHACKFD-KSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAINA--VYMQTYIG 298
            G D    C  + ++K AAS+  F  V  + +      V N P++VAI+A     Q Y  
Sbjct: 215 QGVDA--TCNANAEAKDAASIKGFEDVPANSESALLKAVANQPISVAIDASGSEFQFYSS 272

Query: 299 GVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           GV     C   LDHGV  VGYGS G          YW++KNSWGE WGE GY ++ R
Sbjct: 273 GVFTGS-CGTELDHGVTAVGYGSDG-------GTKYWLVKNSWGEQWGEQGYIRMQR 321


>gi|351629615|gb|AEQ54771.1| KDDL-tailed cysteine proteinase CP4 [Coffea canephora]
          Length = 359

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/331 (38%), Positives = 177/331 (53%), Gaps = 34/331 (10%)

Query: 47  ESTNNDLLGAEHHFSLFKKKFNKAYASQE--EHDHRFTIFKANLRRAARHQKLDPSATHG 104
           E T  DL   E  + L+++  +    S++  E   RF +FKAN+    +  + D      
Sbjct: 24  EITERDLASEESLWDLYERWRSHHTVSRDLSEKRKRFNVFKANVHHIHKVNQKDKPYKLK 83

Query: 105 ITQFSDLTPAEFRRTYLGLRRKLRLPKDADQAPIL---PTNDLPADFDWREKGAVGPVKD 161
           +  F+D+T  EFR  Y    +  R+   +          T  LPA  DWR++GAV  VK+
Sbjct: 84  LNSFADMTNHEFREFYSSKVKHYRMLHGSRANTGFMHGKTESLPASVDWRKQGAVTGVKN 143

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QG CGSCW+FST   +EG N + TG+LVSLSEQ+LVDC  E D E       GCNGGLM 
Sbjct: 144 QGKCGSCWAFSTVVGVEGINKIKTGQLVSLSEQELVDC--ETDNE-------GCNGGLME 194

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKI---AASVANFSVVSLDEDQIAANL 278
           +A+E+  K+GG+  E  YPY   D   +C  D SK+   A ++    +V  +++      
Sbjct: 195 NAYEFIKKSGGITTERLYPYKARDG--SC--DSSKMNAPAVTIDGHEMVPANDENALMKA 250

Query: 279 VKNGPLAVAINAVY--MQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWI 336
           V N P++VAI+A    MQ Y  GV     C   LDHGV +VGYG+A      L    YWI
Sbjct: 251 VANQPVSVAIDASGSDMQFYSEGVYAGDSCGNELDHGVAVVGYGTA------LDGTKYWI 304

Query: 337 IKNSWGESWGENGYYKICRGRN-----VCGV 362
           +KNSWG  WGE GY ++ RG +     VCG+
Sbjct: 305 VKNSWGTGWGEQGYIRMQRGVDAAEGGVCGI 335


>gi|297297049|ref|XP_002804951.1| PREDICTED: cathepsin H [Macaca mulatta]
          Length = 323

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/318 (37%), Positives = 171/318 (53%), Gaps = 31/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  +  K +K Y+++E H HR   F +N R+   H   + +    + QFSD++ AE + 
Sbjct: 22  HFKSWMSKHHKTYSTEEYH-HRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKH 80

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTT 174
            YL        P++        +  T   P   DWR+KG  V PVK+QG+CGSCW+FSTT
Sbjct: 81  KYL-----WSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTT 135

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +ATGK++SL+EQQLVDC  + +       + GC GGL + AFEY L   G+M
Sbjct: 136 GALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNKGIM 188

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G D    CKF   K    V + + +++ DE+ +   +    P++ A      
Sbjct: 189 GEDTYPYQGKDGD--CKFRPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQD 246

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  G+     C +   +++H VL VGYG            PYWI+KNSWG  WG NG
Sbjct: 247 FMIYKTGIYSSTSCHKTPDKVNHAVLAVGYGEE-------NGIPYWIVKNSWGPQWGMNG 299

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG+N+CG+ +  S
Sbjct: 300 YFLIERGKNMCGLAACAS 317


>gi|46401612|dbj|BAD16614.1| cysteine proteinase [Dianthus caryophyllus]
          Length = 459

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 135/371 (36%), Positives = 191/371 (51%), Gaps = 46/371 (12%)

Query: 3   SKTVVLFLVSLVVFSAVSSGTLIDDVDQLIRQVTDGGDEILSHHESTNNDLLGAEHHFSL 62
           SK+ +  L S++    VSS  L  D+  + R      DEI S +E+              
Sbjct: 4   SKSTIFLLFSIIFI--VSSSAL--DLSIIDRAFNRPDDEIASLYET-------------- 45

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRRTYLG 122
           +  K  K Y    E   RF IFK NLR        + S   G+ +F+DLT  E+R  YLG
Sbjct: 46  WLVKHGKNYNGLGEKQLRFNIFKDNLRFVDERNSENLSFKLGLNRFADLTNEEYRSVYLG 105

Query: 123 LR-RKLRLPKD----ADQAPILPTNDLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
            R R + + +     +D+      + LP   DWR+KGAV  +KDQGSCGSCW+FS   A+
Sbjct: 106 TRPRSVAVARSGRSKSDRYAFRAGDTLPESVDWRKKGAVAGIKDQGSCGSCWAFSAIAAV 165

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG N + TG L+SLSEQ+LV+CD         S + GC+GGLM+ AFE+ +K  G+  +E
Sbjct: 166 EGVNQIVTGDLISLSEQELVECDT--------SYNDGCDGGLMDYAFEFIIKNEGIDSDE 217

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKNGPLAVAIN--AVYMQT 295
           DYPYTG D G      K+    ++ ++    + +++     V N P++VAI       Q 
Sbjct: 218 DYPYTGRD-GRCDTNRKNAKVVTIDDYEDSPVYDEKSLQKAVANQPVSVAIEGGGRDFQL 276

Query: 296 YIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKICR 355
           Y  GV     C   LDHGV +VGYG+            YWI++NSWG++WGE GY ++ R
Sbjct: 277 YDSGVFTGK-CGTALDHGVAVVGYGTE-------DGLDYWIVRNSWGDTWGEGGYIRMQR 328

Query: 356 GRN----VCGV 362
                  +CG+
Sbjct: 329 NTKLPSGICGI 339


>gi|37786769|gb|AAO64471.1| cathepsin L precursor [Fundulus heteroclitus]
          Length = 337

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 131/322 (40%), Positives = 175/322 (54%), Gaps = 25/322 (7%)

Query: 57  EHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH----GITQFSDLT 112
           + H++L+K   +K Y  +EE   R  +++ NL++   H        H    G+  F D+T
Sbjct: 26  DQHWNLWKSWHSKNYHQREEGWRRL-VWEKNLKKIELHNLEHSMGKHSYRLGMNHFGDMT 84

Query: 113 PAEFRRTYLGLRRKLRLPKDADQAPILPTNDL--PADFDWREKGAVGPVKDQGSCGSCWS 170
             EF++   G + K    +    +  L  N L  P   DWREKG V PVKDQG CGSCW+
Sbjct: 85  HEEFKQIMNGYKHKAE--RKFKGSLFLEPNFLEAPRSVDWREKGYVTPVKDQGECGSCWA 142

Query: 171 FSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKA 230
           FSTTGALEG  F  TGKLVSLS Q LV+C     PE     + GCNGGLM+ AF+Y    
Sbjct: 143 FSTTGALEGQEFTRTGKLVSLSGQNLVECSR---PE----GNEGCNGGLMDQAFQYVKDN 195

Query: 231 GGLMREEDYPYTGTDRGHACKFDKSKIAASVANF-SVVSLDEDQIAANLVKNGPLAVAIN 289
            GL  E+ YPY GTD    C +D    AA+   F  + S +E  +   +   GP++VAI+
Sbjct: 196 QGLDSEDSYPYLGTDD-QPCHYDPKFSAANDTGFVDIPSGNERALMKAVASVGPVSVAID 254

Query: 290 AVY--MQTYIGGVSCPYIC-SRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWG 346
           A +   Q Y  G+     C S  LDHGVL VGYG  G     +  K +WI+KNSW E+WG
Sbjct: 255 AGHESFQFYQSGIYYEKECSSEELDHGVLAVGYGFQGE---DVDGKKFWIVKNSWSENWG 311

Query: 347 ENGYYKICRGR-NVCGVDSMVS 367
           + GY  + + R N CG+ +  S
Sbjct: 312 DKGYIYMAKDRKNHCGIATAAS 333


>gi|355778231|gb|EHH63267.1| Cathepsin H, partial [Macaca fascicularis]
          Length = 305

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/318 (37%), Positives = 171/318 (53%), Gaps = 31/318 (9%)

Query: 59  HFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATHGITQFSDLTPAEFRR 118
           HF  +  K +K Y+++E H HR   F +N R+   H   + +    + QFSD++ AE + 
Sbjct: 4   HFKSWMSKHHKTYSTEEYH-HRMQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKH 62

Query: 119 TYLGLRRKLRLPKDADQAP---ILPTNDLPADFDWREKGA-VGPVKDQGSCGSCWSFSTT 174
            YL        P++        +  T   P   DWR+KG  V PVK+QG+CGSCW+FSTT
Sbjct: 63  KYL-----WSEPQNCSATKSNYLRGTGPYPPSMDWRKKGNFVSPVKNQGACGSCWTFSTT 117

Query: 175 GALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLM 234
           GALE A  +ATGK++SL+EQQLVDC  + +       + GC GGL + AFEY L   G+M
Sbjct: 118 GALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYILYNKGIM 170

Query: 235 REEDYPYTGTDRGHACKFDKSKIAASVANFSVVSL-DEDQIAANLVKNGPLAVAINAVY- 292
            E+ YPY G D    CKF   K    V + + +++ DE+ +   +    P++ A      
Sbjct: 171 GEDTYPYQGKDGD--CKFRPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQD 228

Query: 293 MQTYIGGVSCPYICSR---RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENG 349
              Y  G+     C +   +++H VL VGYG            PYWI+KNSWG  WG NG
Sbjct: 229 FMMYKTGIYSSTSCHKTPDKVNHAVLAVGYGEE-------NGIPYWIVKNSWGPQWGMNG 281

Query: 350 YYKICRGRNVCGVDSMVS 367
           Y+ I RG+N+CG+ +  S
Sbjct: 282 YFLIERGKNMCGLAACAS 299


>gi|291224870|ref|XP_002732425.1| PREDICTED: cathepsin L2-like [Saccoglossus kowalevskii]
          Length = 326

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/315 (39%), Positives = 173/315 (54%), Gaps = 27/315 (8%)

Query: 63  FKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSA----THGITQFSDLTPAEFRR 118
           +K+ + K Y +Q+E   R  I+  NL+    H +   S     T  + QF DLT  E+R 
Sbjct: 25  WKRTYGKEY-TQKEEALRHMIWNVNLKMIQMHNEKYMSGKSTYTQNMNQFGDLTNEEYRE 83

Query: 119 TYLGLRRKLRLPKDADQAPILPTN-DLPADFDWREKGAVGPVKDQGSCGSCWSFSTTGAL 177
              G ++  +         +LP+N   PA  DWR +G V  VKDQG+CGSCW+FS+TG+L
Sbjct: 84  LMCGYKKSNKTVISKPSTFLLPSNYRAPASIDWRTQGYVTDVKDQGACGSCWAFSSTGSL 143

Query: 178 EGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMNSAFEYTLKAGGLMREE 237
           EG  F  TGKLV LSEQQLVDC  +         + GC GG M+ AF Y +K  G   E+
Sbjct: 144 EGQTFKKTGKLVPLSEQQLVDCSGDYG-------NMGCGGGWMDQAFSY-IKDKGEESED 195

Query: 238 DYPYTGTDRGHACKFDKSKIAASVANFS-VVSLDEDQIAANLVKNGPLAVAINAVY--MQ 294
            YPYTGTD    C +D SK+ A+   ++ +  +DE+ +   +   GP++VAI+A +   Q
Sbjct: 196 GYPYTGTD--DTCVYDASKVVATDTGYTDIPEMDENALQQAVATVGPISVAIDATHSSFQ 253

Query: 295 TYIGGVSCPYICSR-RLDHGVLLVGYGSAGYAPIRLKEKPYWIIKNSWGESWGENGYYKI 353
            Y  GV     CS+  LDH VL VGYG++       +   YWI+KNSW   WG  GY ++
Sbjct: 254 FYESGVYDEPECSQTNLDHAVLAVGYGTSE------EGLDYWIVKNSWSTGWGMQGYIEM 307

Query: 354 CRGR-NVCGVDSMVS 367
            R + N CG+ S  S
Sbjct: 308 SRNKDNQCGIASKAS 322


>gi|297794671|ref|XP_002865220.1| senescence-associated gene 12 [Arabidopsis lyrata subsp. lyrata]
 gi|297311055|gb|EFH41479.1| senescence-associated gene 12 [Arabidopsis lyrata subsp. lyrata]
          Length = 346

 Score =  205 bits (521), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/327 (36%), Positives = 169/327 (51%), Gaps = 32/327 (9%)

Query: 50  NNDLLGAEHHFSLFKKKFNKAYASQEEHDHRFTIFKANLRRAARHQKLDPSATH--GITQ 107
           +N+L+  + H   +  K  + YA  +E  +R+ +FK+N+ R      +    T    + Q
Sbjct: 29  DNELIMQKRHIE-WMTKHGRVYADVKEKSNRYVVFKSNVERIEHLNNIPAGRTFKLAVNQ 87

Query: 108 FSDLTPAEFRRTYLGLRRKLRLPKDADQAPI------LPTNDLPADFDWREKGAVGPVKD 161
           F+DLT  EFR  Y G +    L   +           + +  LP   DWR KGAV P+K+
Sbjct: 88  FADLTNDEFRSMYTGFKGVSSLSSQSQTKTTSFRYQNVSSGALPISVDWRTKGAVTPIKN 147

Query: 162 QGSCGSCWSFSTTGALEGANFLATGKLVSLSEQQLVDCDHECDPEEPGSCDSGCNGGLMN 221
           QGSCG CW+FS   A+EGA  +  GKL+SLSEQQLVDCD         + D GC GGLM+
Sbjct: 148 QGSCGCCWAFSAVAAIEGATQIKKGKLISLSEQQLVDCD---------TNDFGCEGGLMD 198

Query: 222 SAFEYTLKAGGLMREEDYPYTGTDRGHACKFDKSKIAASVANFSVVSLDEDQIAANLVKN 281
           +AFE+ +  GGL  E +YPY G D     K    K A S+  +  V ++++Q     V +
Sbjct: 199 TAFEHIMATGGLTTESNYPYKGEDATCNSKKTNPK-ATSITGYEDVPVNDEQALMKAVAH 257

Query: 282 GPLAVAIN--AVYMQTYIGGVSCPYICSRRLDHGVLLVGYGSAGYAPIRLKEKPYWIIKN 339
            P++V I       Q Y  GV     C+  LDH V  +GYG +           YWIIKN
Sbjct: 258 QPVSVGIEGGGFDFQFYSSGVFTGE-CTTYLDHAVTAIGYGQS------TNGSKYWIIKN 310

Query: 340 SWGESWGENGYYKICR----GRNVCGV 362
           SWG  WGE+GY +I +     + +CG+
Sbjct: 311 SWGTKWGESGYMRIQKDIKDKQGLCGL 337


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.318    0.135    0.413 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,184,219,943
Number of Sequences: 23463169
Number of extensions: 271272428
Number of successful extensions: 569318
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6703
Number of HSP's successfully gapped in prelim test: 742
Number of HSP's that attempted gapping in prelim test: 540087
Number of HSP's gapped (non-prelim): 9053
length of query: 373
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 229
effective length of database: 8,980,499,031
effective search space: 2056534278099
effective search space used: 2056534278099
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)