BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 017319
(373 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224065379|ref|XP_002301791.1| predicted protein [Populus trichocarpa]
gi|222843517|gb|EEE81064.1| predicted protein [Populus trichocarpa]
Length = 396
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 206/382 (53%), Positives = 251/382 (65%), Gaps = 41/382 (10%)
Query: 15 TLDAILTNKRPSPPPAPAGRTLLDIIRDEDPNGKNFGHKDRKSWKLFRDRLRLKRAGAAW 74
TL+ IL+ ++ P A RTLLDIIRDE+ +G FGHKD+KSWK FRD+LRLKRAG+AW
Sbjct: 33 TLETILSMEKQ---PGQANRTLLDIIRDEE-SGSLFGHKDKKSWKAFRDKLRLKRAGSAW 88
Query: 75 TSSVRIPTSDIPIP------SSSLSNSNPRSQLIRRSSVRFQTNPAGELASQLE---DNR 125
TSSV P SDIPIP +S+++N++ RS + RR+SVRF T + ++ +LE DN
Sbjct: 89 TSSVHTPASDIPIPVENRFRNSNINNASSRSLMTRRNSVRF-TTVSSVISPELEESDDNS 147
Query: 126 G----APPQFARRPSSKVASSSPGPTQSSHHEDSPEG------EGSPTRSSRQPQLSRHN 175
G + PQ RR S++ S+ S H P+ +G P+R R PQ+SRHN
Sbjct: 148 GIGPSSRPQMTRRSSTRFGSAMLQVQSESTHSGDPDVSIHAVEDGPPSRGFR-PQISRHN 206
Query: 176 STRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAE 235
STR +T S++N +DP AREGT RL LA+ER LSAREAVAAQEAAEA A
Sbjct: 207 STRFPVVDSTQSDENDLDP--SAREGTTRLGTALAEERLLSAREAVAAQEAAEAAAQEEA 264
Query: 236 AEAEAEAEAS----VQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDE 291
A A + + + E EPV RMSLMDLLEETDRQMG EGSRY VG+ E
Sbjct: 265 AATAAAEHEAEEGAMPMPGSTETQEPV-----RMSLMDLLEETDRQMGFEGSRYTVGDLE 319
Query: 292 DEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRE 351
+++D+ + E E EE + GIE+ CCVCMVRHKGAAFIPCGHTFCRLCSRE
Sbjct: 320 ACDDDDDEDEEEEDGGEEG-----DGVAGIEYTCCVCMVRHKGAAFIPCGHTFCRLCSRE 374
Query: 352 LWVQRGNCPLCNGFILEILDIF 373
LWVQRGNCPLCNGFILEILDIF
Sbjct: 375 LWVQRGNCPLCNGFILEILDIF 396
>gi|255560129|ref|XP_002521082.1| hypothetical protein RCOM_1719530 [Ricinus communis]
gi|223539651|gb|EEF41233.1| hypothetical protein RCOM_1719530 [Ricinus communis]
Length = 370
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 211/389 (54%), Positives = 251/389 (64%), Gaps = 49/389 (12%)
Query: 11 LAGLTLDAILTNKRPSPPP---APAGRTLLDIIRDEDPNGKNFGHKDRKSWKLFRDRLRL 67
LAGLTLDA+L +K+ P P A RTLLDIIRDE+P+G FGHKD+KSWK FRDRLRL
Sbjct: 5 LAGLTLDAVLGDKQAQPTPTATAQMNRTLLDIIRDEEPHGSLFGHKDKKSWKAFRDRLRL 64
Query: 68 KRAGAAWTSSVRIPTSDIPIPSSSLSNSN---PRSQLIRRSSVRFQTNPAGELASQLE-D 123
KRAGAAWTS+V IP SDIPI +++ + SN RS + RR+SVRF T +G+ + +LE D
Sbjct: 65 KRAGAAWTSTVPIPASDIPIYNANSTASNFNQSRSLMSRRNSVRFTTLSSGDHSPRLEED 124
Query: 124 NRG-------------------APPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTR 164
+ G A P RR SS+ SS P ++ H G+ +R
Sbjct: 125 DNGYHNNDHPPAPAQAVSVSGSARPFMVRRVSSRYGSSLL-PDENIH----AVGDEPQSR 179
Query: 165 SSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQ 224
S R PQ+SRHNSTR + T ++ V G R A LA+ER LSAREAVAAQ
Sbjct: 180 SFR-PQMSRHNSTRNGESPFTGGGEDEVAREGGGGSGRRLGAA-LAEERALSAREAVAAQ 237
Query: 225 EAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSR 284
EAAEAEAAA A AE + E + AE QP RMSLMDLLEETDRQMG GSR
Sbjct: 238 EAAEAEAAAQAAAEAAEED-----EGNSPGAEEAQP--VRMSLMDLLEETDRQMGFVGSR 290
Query: 285 YAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTF 344
Y +G+D++E EE++ + + G +G IEH CCVCMVRHKGAAFIPCGHTF
Sbjct: 291 YTIGDDDEECEEEQEDEDDNGVDGGDG---------IEHTCCVCMVRHKGAAFIPCGHTF 341
Query: 345 CRLCSRELWVQRGNCPLCNGFILEILDIF 373
CRLCSRELWVQRGNCPLCNGFI+EILDIF
Sbjct: 342 CRLCSRELWVQRGNCPLCNGFIVEILDIF 370
>gi|449443724|ref|XP_004139627.1| PREDICTED: uncharacterized protein LOC101222466 [Cucumis sativus]
gi|449475393|ref|XP_004154438.1| PREDICTED: uncharacterized LOC101222466 [Cucumis sativus]
Length = 342
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 174/391 (44%), Positives = 218/391 (55%), Gaps = 67/391 (17%)
Query: 1 MSAVQDRRDPLAGLTLDAIL-TNKRPSPPPAPA----GRTLLDIIRDEDPNGKNFGHKDR 55
M AV D RD G TL+ +L KR P +PA GRTLLDIIRD D +++R
Sbjct: 1 MLAVSDGRDLAGGFTLNDVLAIQKRALPSSSPAVRLHGRTLLDIIRD-DVGKSPVSNRER 59
Query: 56 KSWKLFRDRLRLK-RAGAAWTSSVRIP------------TSDIPIPSSSLSNSNPRSQLI 102
SWK FRDRLRL R+ ++S+R P S P ++++S + Q+
Sbjct: 60 TSWKFFRDRLRLSIRSQIPPSNSLRFPGLTSAEMMSNDEHSPEPTTTAAVSAAPSLRQIS 119
Query: 103 RRSSVRFQTNPAGELASQLEDNRGAPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSP 162
RR+S R NP+ + PSS+ +S+ P + + GS
Sbjct: 120 RRNSTRL--NPSVQ------------------PSSEATNSNASP----DNNSAAAASGSG 155
Query: 163 TRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVA 222
RS +PQ+SRHNSTR + ++ D + REGTRRL+ LA+ER +SAREAV
Sbjct: 156 GRSLLRPQMSRHNSTRFSVERS----ESFTDLTEPTREGTRRLSAALAEERSMSAREAVT 211
Query: 223 AQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEG 282
AQEAA+AEA E E + E A P RMSLMDLLEETDRQMG EG
Sbjct: 212 AQEAADAEATVDEEEQQQEQVAEST------------PAPVRMSLMDLLEETDRQMGFEG 259
Query: 283 SRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGH 342
S Y + ++++EEE + + +GG E +CCVCMVRHKGAAFIPCGH
Sbjct: 260 STYRIEDEDEEEEIENEVSTTVCGGGG--------SGGTEPHCCVCMVRHKGAAFIPCGH 311
Query: 343 TFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
TFCRLCSRELWV RGNCPLCNGFILEILDIF
Sbjct: 312 TFCRLCSRELWVSRGNCPLCNGFILEILDIF 342
>gi|359495531|ref|XP_003635012.1| PREDICTED: uncharacterized protein LOC100852917 isoform 2 [Vitis
vinifera]
gi|359495533|ref|XP_003635013.1| PREDICTED: uncharacterized protein LOC100852917 isoform 3 [Vitis
vinifera]
Length = 335
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/379 (45%), Positives = 208/379 (54%), Gaps = 80/379 (21%)
Query: 6 DRRDPLAGLTLDAILTNKRPSPPPAPAGRTLLDIIRDE-----DPNGKNFGHKDRKSWKL 60
D RD AGLTL A+L ++ PPP RTLLDIIRDE D G+ + ++ SWK
Sbjct: 26 DGRDAWAGLTLGAVLGCEK-RPPPGHINRTLLDIIRDESTGYKDVLGQPNNNNNKMSWKS 84
Query: 61 FRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVR---FQTNPAGEL 117
F+DRLR++RAGAAWTSS+ IP SD+P RSQL RR S R + T+P E
Sbjct: 85 FKDRLRIRRAGAAWTSSMPIPASDVPT----------RSQLSRRQSTRVTMYTTDPP-EP 133
Query: 118 ASQLEDNRGAPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQLSRHNST 177
E++ G P +P P ++ + +PQ SR+NS
Sbjct: 134 TETFEESPGTP-------------ENPLPVEAVQVHN------------LRPQFSRNNSI 168
Query: 178 RVEAASNTVSEDNSVDPFDVAREG---TRRLAVVLAQERQLSAREAVAAQEAAEAEAAAA 234
R A S T S +S +G +RRL+ LA+ER+L E+ AA + EA
Sbjct: 169 R--APSRTFSRADSTRLHTGVTDGPVVSRRLSAALAEERELQRAESAAALGGDDDEAGEE 226
Query: 235 EAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEE 294
E E E E E RMSLM LLEETDRQ G+ G Y + E+EDE+
Sbjct: 227 EDEGEGEEEGPEAAP--------------RMSLMALLEETDRQAGIVGPAYVLEEEEDED 272
Query: 295 EEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV 354
EE+EA + GGIE+NCCVCMVRHKGAAFIPCGHTFCRLCSRELWV
Sbjct: 273 EEEEAGS----------------GGGIEYNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV 316
Query: 355 QRGNCPLCNGFILEILDIF 373
RGNCPLCNGFILEILDIF
Sbjct: 317 SRGNCPLCNGFILEILDIF 335
>gi|359495529|ref|XP_003635011.1| PREDICTED: uncharacterized protein LOC100852917 isoform 1 [Vitis
vinifera]
Length = 329
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 171/379 (45%), Positives = 208/379 (54%), Gaps = 80/379 (21%)
Query: 6 DRRDPLAGLTLDAILTNKRPSPPPAPAGRTLLDIIRDE-----DPNGKNFGHKDRKSWKL 60
D RD AGLTL A+L ++ PPP RTLLDIIRDE D G+ + ++ SWK
Sbjct: 20 DGRDAWAGLTLGAVLGCEK-RPPPGHINRTLLDIIRDESTGYKDVLGQPNNNNNKMSWKS 78
Query: 61 FRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVR---FQTNPAGEL 117
F+DRLR++RAGAAWTSS+ IP SD+P RSQL RR S R + T+P E
Sbjct: 79 FKDRLRIRRAGAAWTSSMPIPASDVPT----------RSQLSRRQSTRVTMYTTDPP-EP 127
Query: 118 ASQLEDNRGAPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQLSRHNST 177
E++ G P +P P ++ + +PQ SR+NS
Sbjct: 128 TETFEESPGTP-------------ENPLPVEAVQVHNL------------RPQFSRNNSI 162
Query: 178 RVEAASNTVSEDNSVDPFDVAREG---TRRLAVVLAQERQLSAREAVAAQEAAEAEAAAA 234
R A S T S +S +G +RRL+ LA+ER+L E+ AA + EA
Sbjct: 163 R--APSRTFSRADSTRLHTGVTDGPVVSRRLSAALAEERELQRAESAAALGGDDDEAGEE 220
Query: 235 EAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEE 294
E E E E E RMSLM LLEETDRQ G+ G Y + E+EDE+
Sbjct: 221 EDEGEGEEEGPEAAP--------------RMSLMALLEETDRQAGIVGPAYVLEEEEDED 266
Query: 295 EEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV 354
EE+EA + GGIE+NCCVCMVRHKGAAFIPCGHTFCRLCSRELWV
Sbjct: 267 EEEEAGS----------------GGGIEYNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV 310
Query: 355 QRGNCPLCNGFILEILDIF 373
RGNCPLCNGFILEILDIF
Sbjct: 311 SRGNCPLCNGFILEILDIF 329
>gi|356566325|ref|XP_003551383.1| PREDICTED: uncharacterized protein LOC100795449 [Glycine max]
Length = 345
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 164/391 (41%), Positives = 213/391 (54%), Gaps = 85/391 (21%)
Query: 11 LAGLTLDAILTNKRP--SPPPA---PAGRTLLDIIRDEDPNGKNFGHKDRKSWKLFRDRL 65
LAGLTLD +L N++ S PP+ P RTLLDII++++ N KDR+SWK F+D+L
Sbjct: 12 LAGLTLDDVLGNQKKFSSTPPSQQLPKSRTLLDIIKEDESN-----KKDRRSWKAFKDKL 66
Query: 66 RLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVR----FQTNPAGEL---- 117
RLKRAG+AWTSS+ IPTSD+PIP+ NS +Q RR+SVR QT+ ++
Sbjct: 67 RLKRAGSAWTSSIHIPTSDVPIPNP---NSRTFTQFGRRNSVRSPTQTQTHSDSDMSTPY 123
Query: 118 -ASQLED------NRGAP--------PQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSP 162
A Q+ED + G+P PQF+R S++ A + G
Sbjct: 124 NAHQVEDLDPADDDSGSPTTGPPAVRPQFSRHGSTRFAG---------------DASGDN 168
Query: 163 TRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVA 222
T + +PQLSR NST + S +P+ R V+ EA
Sbjct: 169 TAGTLRPQLSRRNSTNI-----------SSEPYKRGR--------VVTFRDSFDDEEADG 209
Query: 223 AQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEG 282
E A A A+ + + A+ A P MSLMDLLEETDR+MGLEG
Sbjct: 210 EDGKKPGEGRALSAREAVAAQEAAEAAAQEAEAAEQAPVT--MSLMDLLEETDREMGLEG 267
Query: 283 SRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGH 342
SRY + +DED +E+++ + + G +EH CCVCMV+HK AAFIPCGH
Sbjct: 268 SRYILSDDEDFDEDEDEDDDGG-------------EGSMEHTCCVCMVKHKAAAFIPCGH 314
Query: 343 TFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
TFCR+CSREL V RGNCPLCN FILEILDIF
Sbjct: 315 TFCRMCSRELMVSRGNCPLCNNFILEILDIF 345
>gi|357460827|ref|XP_003600695.1| Zinc finger-like protein [Medicago truncatula]
gi|355489743|gb|AES70946.1| Zinc finger-like protein [Medicago truncatula]
Length = 340
Score = 227 bits (579), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 163/392 (41%), Positives = 215/392 (54%), Gaps = 71/392 (18%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKR---PSPP-------PAPAGRTLLDIIRDEDPNGKNF 50
MS + +R+ LAGL+LD IL N++ +PP P P RTL+DII+D++ N
Sbjct: 1 MSTTESKREKLAGLSLDDILANQQRHGSTPPSSTTPRQPPPKSRTLIDIIKDDESN---- 56
Query: 51 GHKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVRFQ 110
KDR+SWK F+D+LRLKRAG+AWTSS+ IPTSDIPI + NS SQ RR+SVR Q
Sbjct: 57 -KKDRRSWKAFKDKLRLKRAGSAWTSSIPIPTSDIPIQNP---NSRSFSQFGRRNSVRVQ 112
Query: 111 TNPAGELASQL------EDNRGAP---PQFARRPSSKVASSSPGPTQSSHHEDSPEGEGS 161
T+ ++++ D AP P+F R S++ + DS E G
Sbjct: 113 THYDSDMSTHQVDELDPSDESNAPASRPKFTRGSSTRFTA------------DSSENSGG 160
Query: 162 PTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAV 221
+ +PQLSR NST V +A DPF R+ VV ++
Sbjct: 161 ---GNLRPQLSRKNSTNVSSA----------DPF-------RKGRVVTFRDSFDDEEPDD 200
Query: 222 AAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLE 281
+ A +A A+ A EAEAEA P P MSLMDLL ETDR+MGLE
Sbjct: 201 DTKHPETGRALSAREAVAAQEAAEAAAEAEAEAEAATGP--PTMSLMDLLGETDREMGLE 258
Query: 282 GSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCG 341
GSRY + ++ED ++D E E + E+ +EH C +CMV+HKG A CG
Sbjct: 259 GSRYILSDEEDFSDDDYEEGEDD----------EDGESALEHTCSICMVKHKGTALAACG 308
Query: 342 HTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
H+FCR+CSREL V +GNCPLCN F+LEIL+IF
Sbjct: 309 HSFCRMCSRELLVSKGNCPLCNNFVLEILEIF 340
>gi|147809369|emb|CAN64493.1| hypothetical protein VITISV_001939 [Vitis vinifera]
Length = 326
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 168/379 (44%), Positives = 205/379 (54%), Gaps = 80/379 (21%)
Query: 6 DRRDPLAGLTLDAILTNKRPSPPPAPAGRTLLDIIRDE-----DPNGKNFGHKDRKSWKL 60
D RD AGLTL A+L ++ PPP RTLLDIIRDE D G+ + ++ SWK
Sbjct: 17 DGRDAWAGLTLGAVLGCEK-RPPPGHINRTLLDIIRDESTGYKDVLGQPNNNNNKMSWKS 75
Query: 61 FRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVR---FQTNPAGEL 117
F+DRLR++RAGAAWTSS+ IP SD+P RSQL RR S R + T+P E
Sbjct: 76 FKDRLRIRRAGAAWTSSMPIPASDVPT----------RSQLSRRQSTRVTMYTTDPP-EP 124
Query: 118 ASQLEDNRGAPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQLSRHNST 177
E++ G P +P P ++ + +PQ SR+NS
Sbjct: 125 TETFEESPGTP-------------ENPLPVEAVQVHNL------------RPQFSRNNSI 159
Query: 178 RVEAASNTVSEDNSVDPFDVAREG---TRRLAVVLAQERQLSAREAVAAQEAAEAEAAAA 234
R A S T S +S +G +RRL+ LA+ER+L E+ AA + EA
Sbjct: 160 R--APSRTFSRADSTRLHTGVTDGPVVSRRLSAALAEERELQRAESAAALGGDDDEAGEE 217
Query: 235 EAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEE 294
E E E E E RMSLM LLEETDRQ G+ G Y + E+EDE+
Sbjct: 218 EDEGEGEEEGPEAAP--------------RMSLMALLEETDRQAGIVGPAYVLEEEEDED 263
Query: 295 EEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWV 354
EE+E ++ EY NCCVCMVRHKGAAFIPCGHTFCRLCSRELWV
Sbjct: 264 EEEEGDSGGGIEY----------------NCCVCMVRHKGAAFIPCGHTFCRLCSRELWV 307
Query: 355 QRGNCPLCNGFILEILDIF 373
RGNCPLCNGFILEILDIF
Sbjct: 308 SRGNCPLCNGFILEILDIF 326
>gi|356524487|ref|XP_003530860.1| PREDICTED: uncharacterized protein LOC100776257 [Glycine max]
Length = 343
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 162/396 (40%), Positives = 207/396 (52%), Gaps = 97/396 (24%)
Query: 11 LAGLTLDAILTN-KRPSPPP----APAGRTLLDIIRDEDPNGKNFGHKDRKSWKLFRDRL 65
LAGLTLD +L N KRPS P P RTLLDII++++ N KDR+SWK F+D+L
Sbjct: 12 LAGLTLDDVLGNQKRPSSTPPSQQLPKSRTLLDIIKEDESN-----KKDRRSWKAFKDKL 66
Query: 66 RLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVR----------------- 108
RLKRAG+AWTS++ IPTSD+PIP+ NS +Q R+SV+
Sbjct: 67 RLKRAGSAWTSTIHIPTSDVPIPNP---NSRIFTQFGHRNSVQSPTQTLTLTHSDSDMST 123
Query: 109 -FQTNPAGELASQLEDNRGAP--------PQFARRPSSKVASSSPGPTQSSHHEDSPEGE 159
+ +L D+ G P PQF+RR S++ + P GE
Sbjct: 124 PYDARQVEDLDPAAADDSGYPATMPPAVRPQFSRRGSTRF-------------DGDPSGE 170
Query: 160 GSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSARE 219
T + +PQLSR NST + + +P+ R + R E
Sbjct: 171 N--TAGTLRPQLSRRNSTNMPS-----------EPYKRGR---------VVTFRDTFDDE 208
Query: 220 AVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAE--PVQPRQPRMSLMDLLEETDRQ 277
++ E A +A A+ A + EA E PV MSLMDLLEETDR+
Sbjct: 209 DDGGEKPGEGRALSAREAVAAQEAAEAAAQEAEEAEEQAPVM-----MSLMDLLEETDRE 263
Query: 278 MGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAF 337
MGLEGSRY + +D+++E+ED+ E +EH CCVCMVRHK AAF
Sbjct: 264 MGLEGSRYILSDDDEDEDEDDDGGEGS----------------MEHTCCVCMVRHKAAAF 307
Query: 338 IPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
IPCGHTFCR+CSREL V RGNCP CN FILEILDIF
Sbjct: 308 IPCGHTFCRMCSRELMVSRGNCPRCNNFILEILDIF 343
>gi|449453419|ref|XP_004144455.1| PREDICTED: uncharacterized protein LOC101209945 [Cucumis sativus]
Length = 343
Score = 214 bits (545), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 171/396 (43%), Positives = 216/396 (54%), Gaps = 76/396 (19%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKRPSPPPAPA-----GRTLLDIIRDEDPN-GKNFGHKD 54
MS V+D R LAG TLD +L N R PP GRTLLDIIRDE+P+ GK KD
Sbjct: 1 MSMVEDGRS-LAGYTLDDVLANNRLGPPATARATEIRGRTLLDIIRDEEPSTGKGLFGKD 59
Query: 55 RKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVRFQTNPA 114
+++WK FRD+LRLKRAG+AW S+V IPTSDIP+ N RS + RR+ VRF T +
Sbjct: 60 KRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPV-------HNKRSLMGRRNQVRFNTGSS 112
Query: 115 GELASQLEDNRGAPPQFARRPSSKVASSS------------PGPTQSSHHEDSPEGE--- 159
+ +P +R PS + + S+ S+ H D
Sbjct: 113 ----------KNSPDNQSRHPSEETSKSTRRQMCRQTSTMNSSSDSSAFHYDESSEYSSS 162
Query: 160 --GSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSA 217
+P R R PQ+SRHNS RV SN + +N DP + R+ R + L++ R +SA
Sbjct: 163 PDAAPVRIMR-PQMSRHNSVRV---SNPM--ENYTDPTEPDRDNRIR-HLNLSEHRMMSA 215
Query: 218 REAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQ 277
REAVAAQEAA+A + E + A PV RMSLMDLL ETDR+
Sbjct: 216 REAVAAQEAADAASEEEEESSPASE--------------PV-----RMSLMDLLHETDRE 256
Query: 278 MGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAF 337
MG E S Y +G + + EEDE + E E + G+ E +CCVCMV+HK
Sbjct: 257 MGFERSSYGMGFEGNFLEEDEDDEYEEDEDDGNGE---------EFSCCVCMVKHKNGPL 307
Query: 338 IPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CGHTFCRLCS+EL V RGNCP C+ FILEILD F
Sbjct: 308 ASCGHTFCRLCSKELMVSRGNCPTCSNFILEILDAF 343
>gi|15231396|ref|NP_187368.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|6642653|gb|AAF20234.1|AC012395_21 putative RING zinc finger protein [Arabidopsis thaliana]
gi|56381891|gb|AAV85664.1| At3g07120 [Arabidopsis thaliana]
gi|58531344|gb|AAW78594.1| At3g07120 [Arabidopsis thaliana]
gi|332640980|gb|AEE74501.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 360
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 170/406 (41%), Positives = 227/406 (55%), Gaps = 79/406 (19%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNK----------------RPSPPPAPAGRTLLDIIRDED 44
MSA++ R + LAGL+LDA+L + + P P +TL DIIR+E
Sbjct: 1 MSALKSRSNSLAGLSLDAVLGGEILIEPPSLPSPPPLPSKSLVPHRPTSQTLFDIIREEY 60
Query: 45 PNGKNFGHKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRR 104
GHKDR +W++FR++LRLKR G+AWTSS+ IP SDI IP NP+
Sbjct: 61 AKE---GHKDRTTWQIFREKLRLKRTGSAWTSSLHIPASDILIP-------NPK-----H 105
Query: 105 SSVRFQTNPAGELASQLEDNRGAPPQ-----------FARRPSSKVASSSPGPTQSSHHE 153
F+++ AG + D A P F R S +V SS + +
Sbjct: 106 IGTAFRSHSAGL---NIRDLVHAIPMSDPPGSSGRAMFTRGSSMRVGSSK-------NPD 155
Query: 154 DSPEG----EGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVL 209
DSP+ +G P+RS + PQLSRH+S R ++ E+N+ R V
Sbjct: 156 DSPDISVLEDGPPSRSFK-PQLSRHDSVR----DHSEGEENNR---------RRHPIVTF 201
Query: 210 AQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPR--MSL 267
+ERQ+SAREAVAAQEAAEAEAAAA + + + E E + +P+ MSL
Sbjct: 202 VEERQMSAREAVAAQEAAEAEAAAAGGSEDEDDDDEEDDSGETEEMKSSSASEPKQTMSL 261
Query: 268 MDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCV 327
MDLLEETDRQMGL GSRYA+ +E+E+ E E + EEEGD G E +CCV
Sbjct: 262 MDLLEETDRQMGLTGSRYAM-----DEDEEYEEDEEDENNEEEGDS--HGGGEGELSCCV 314
Query: 328 CMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CMV+ KGA+F PCGHTFC+LCS+EL Q+G+CP+C+ F+LE L+IF
Sbjct: 315 CMVKIKGASFTPCGHTFCKLCSKELMAQKGHCPVCSSFVLEFLEIF 360
>gi|297829260|ref|XP_002882512.1| hypothetical protein ARALYDRAFT_478032 [Arabidopsis lyrata subsp.
lyrata]
gi|297328352|gb|EFH58771.1| hypothetical protein ARALYDRAFT_478032 [Arabidopsis lyrata subsp.
lyrata]
Length = 360
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 170/406 (41%), Positives = 225/406 (55%), Gaps = 79/406 (19%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNK----------------RPSPPPAPAGRTLLDIIRDED 44
MSA++ R + LAGL+LDA+L + + P +TL DIIR+E
Sbjct: 1 MSALKSRSNSLAGLSLDAVLGGEIVIQPSSPPSPPPLPSKSLVPHRATSQTLFDIIREEY 60
Query: 45 PNGKNFGHKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRR 104
GHKDR +W++FR++LRLKR G+AWTSS+ IP SDI IP NP+
Sbjct: 61 AKE---GHKDRTTWQIFREKLRLKRTGSAWTSSLHIPASDILIP-------NPKHL---- 106
Query: 105 SSVRFQTNPAGELASQLEDNRGAPPQ-----------FARRPSSKVASSSPGPTQSSHHE 153
F+++ AG + D A P F R S +V SS + +
Sbjct: 107 -GTAFRSHSAGL---NIRDLVHAIPMSDPPGSSGRAMFTRGSSMRVGSSK-------NPD 155
Query: 154 DSPE----GEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVL 209
DSP+ G+G P+RS + PQLSRH+S R + EDN R V
Sbjct: 156 DSPDISVLGDGPPSRSFK-PQLSRHDSVRDHSDGE---EDNR----------RRHPIVTF 201
Query: 210 AQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPR--MSL 267
+ERQ+SAREAVAAQEAAEAEAAAA + + + E E + +P+ MSL
Sbjct: 202 VEERQMSAREAVAAQEAAEAEAAAAGGSEDEDDDDEEDDSGETEERKSSSGSEPKQTMSL 261
Query: 268 MDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCV 327
MDLLEETDRQMGL GSRYA+ EDE+ EE++E E E + G + E + CCV
Sbjct: 262 MDLLEETDRQMGLTGSRYAMDEDEEYEEDEEDENYEEEGDGQGGGEGELS-------CCV 314
Query: 328 CMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CMV+ KGA+F PCGHTFC+LCS+EL Q+G+CP+C+ F+LE L+IF
Sbjct: 315 CMVKIKGASFTPCGHTFCKLCSKELMAQKGHCPVCSSFVLEFLEIF 360
>gi|356504278|ref|XP_003520924.1| PREDICTED: uncharacterized protein LOC100802736 [Glycine max]
Length = 273
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 68/109 (62%), Positives = 79/109 (72%), Gaps = 10/109 (9%)
Query: 265 MSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHN 324
+SLMDLLEE +++M L Y V +D+D+ E E E +G EEE V +E+N
Sbjct: 175 VSLMDLLEEAEQEMDL----YRVSDDDDDVAEYEKREEEKGGVEEEIGSV------VEYN 224
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCMVRHKGAAFIPCGHTFCR CSRE+WV RGNCPLCN ILEILDIF
Sbjct: 225 CCVCMVRHKGAAFIPCGHTFCRTCSREIWVSRGNCPLCNNLILEILDIF 273
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 34 RTLLDIIRDEDPNGKNFGHKDRKSWKLFRDRLRLKRA-GAAWTSSVRI 80
RTL DIIR+E P+ + KDR SW+ F +LRLKRA G+AW+S+ I
Sbjct: 59 RTLQDIIREEKPSNSSNNTKDRNSWRAFTAKLRLKRAIGSAWSSTTTI 106
>gi|297831372|ref|XP_002883568.1| hypothetical protein ARALYDRAFT_480010 [Arabidopsis lyrata subsp.
lyrata]
gi|297329408|gb|EFH59827.1| hypothetical protein ARALYDRAFT_480010 [Arabidopsis lyrata subsp.
lyrata]
Length = 247
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 89/174 (51%), Gaps = 55/174 (31%)
Query: 200 EGTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQ 259
EG RL VLA+ER LSARE E A V+
Sbjct: 129 EGRIRLGAVLAEERALSAREE------------------------------ETPAERGVE 158
Query: 260 PRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAG 319
P RMSLM+LLEE + QM L +GE EEE V
Sbjct: 159 P--ARMSLMELLEENEGQMSL--------------------VNVDGEAEEE---VAVTVT 193
Query: 320 GIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
E +CCVCMVR KGAAFIPCGHTFCRLCSRELWVQRGNCPLCN ILE+LD+F
Sbjct: 194 AAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 247
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 60/114 (52%), Gaps = 26/114 (22%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKRP-------SPPPA--PAGRTLLDIIRDEDPNGKNFG 51
MS V+ R + LTL+AIL + SPPP+ + R+LL++++ E + +
Sbjct: 15 MSTVETSR---SCLTLEAILMADKNRTSPQILSPPPSRNQSNRSLLEVMQREHRHSR--- 68
Query: 52 HKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSS---------LSNSN 96
D+ +WK R++LRLKR W SS IPT D PIP+ LSNSN
Sbjct: 69 --DKTAWKSLREKLRLKRNATVWISSNSIPTLDTPIPNRDNVSHQLGFLLSNSN 120
>gi|296090484|emb|CBI40815.3| unnamed protein product [Vitis vinifera]
Length = 317
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 53/56 (94%), Positives = 54/56 (96%)
Query: 318 AGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
GGIE+NCCVCMVRHKGAAFIPCGHTFCRLCSRELWV RGNCPLCNGFILEILDIF
Sbjct: 262 GGGIEYNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFILEILDIF 317
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 86/161 (53%), Gaps = 35/161 (21%)
Query: 6 DRRDPLAGLTLDAILTNKRPSPPPAPAGRTLLDIIRDE-----DPNGKNFGHKDRKSWKL 60
D RD AGLTL A+L ++ PPP RTLLDIIRDE D G+ + ++ SWK
Sbjct: 90 DGRDAWAGLTLGAVLGCEK-RPPPGHINRTLLDIIRDESTGYKDVLGQPNNNNNKMSWKS 148
Query: 61 FRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVR---FQTNPAGEL 117
F+DRLR++RAGAAWTSS+ IP SD+P RSQL RR S R + T+P E
Sbjct: 149 FKDRLRIRRAGAAWTSSMPIPASDVPT----------RSQLSRRQSTRVTMYTTDPP-EP 197
Query: 118 ASQLEDNRGAP---------------PQFARRPSSKVASSS 143
E++ G P PQF+R S + S +
Sbjct: 198 TETFEESPGTPENPLPVEAVQVHNLRPQFSRNNSIRAPSRT 238
>gi|15230243|ref|NP_189139.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|79313365|ref|NP_001030762.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|9293985|dbj|BAB01888.1| unnamed protein product [Arabidopsis thaliana]
gi|48958487|gb|AAT47796.1| At3g25030 [Arabidopsis thaliana]
gi|51536564|gb|AAU05520.1| At3g25030 [Arabidopsis thaliana]
gi|332643448|gb|AEE76969.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332643449|gb|AEE76970.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 250
Score = 130 bits (328), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/174 (46%), Positives = 89/174 (51%), Gaps = 56/174 (32%)
Query: 200 EGTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQ 259
EG RL VLA+ER LSARE E AE E E +
Sbjct: 133 EGRIRLGAVLAEERALSAREE--------------ETPAEREVEPA-------------- 164
Query: 260 PRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAG 319
RMSLM+LLEE + QM +GE EEE V
Sbjct: 165 ----RMSLMELLEENEGQMSF--------------------VSVDGEAEEEVAAV----T 196
Query: 320 GIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
E +CCVCMVR KGAAFIPCGHTFCRLCSRELWVQRGNCPLCN ILE+LD+F
Sbjct: 197 AAEISCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTTILEVLDLF 250
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 17/98 (17%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKR-------PSPPPA--PAGRTLLDIIRDEDPNGKNFG 51
MS V+ R + LTL+AIL + SPPP+ + R+L+++++ E + +
Sbjct: 18 MSTVESSR---SCLTLEAILMADKNRTSPQILSPPPSRSQSNRSLVEVMQREHRHSR--- 71
Query: 52 HKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPS 89
D+ +WK R++LRLKR G+ W SS IP+ D PIP+
Sbjct: 72 --DKTAWKSLREKLRLKRNGSVWISSNSIPSLDTPIPN 107
>gi|334186481|ref|NP_001190713.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332657834|gb|AEE83234.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 256
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 75/118 (63%), Gaps = 15/118 (12%)
Query: 256 EPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVE 315
E +QP PRMSLM+LLE+ D M +R DE E E + G+ V
Sbjct: 154 EEMQP--PRMSLMELLEDNDGHMYELSAR------------DEVEVEGRDGCDGGGEAVA 199
Query: 316 ENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
G E CCVCMVR KGAAFIPCGHTFCRLCSRELWVQRGNCPLCN IL++LDIF
Sbjct: 200 V-TGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 256
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKRPS-----PPPAP----AGRTLLDIIRDEDPNGKNFG 51
MS V++ R + +TL+ IL + S P P + +LLD++R E
Sbjct: 15 MSTVENGR---SSVTLEDILMAETSSFRSLTTPTTPVRNHSSSSLLDVMRRER------- 64
Query: 52 HKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPI 87
+D+ +WK RD+LRLKR W SS IPT D I
Sbjct: 65 RRDKTAWKSLRDKLRLKRTATGWISSNPIPTLDNHI 100
>gi|5123951|emb|CAB45509.1| putative protein [Arabidopsis thaliana]
gi|7268012|emb|CAB78352.1| putative protein [Arabidopsis thaliana]
Length = 304
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 75/118 (63%), Gaps = 15/118 (12%)
Query: 256 EPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVE 315
E +QP PRMSLM+LLE+ D M +R DE E E + G+ V
Sbjct: 202 EEMQP--PRMSLMELLEDNDGHMYELSAR------------DEVEVEGRDGCDGGGEAVA 247
Query: 316 ENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
G E CCVCMVR KGAAFIPCGHTFCRLCSRELWVQRGNCPLCN IL++LDIF
Sbjct: 248 VT-GAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 304
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 47/93 (50%), Gaps = 19/93 (20%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKRPS-----PPPAP----AGRTLLDIIRDEDPNGKNFG 51
MS V++ R + +TL+ IL + S P P + +LLD++R E
Sbjct: 63 MSTVENGR---SSVTLEDILMAETSSFRSLTTPTTPVRNHSSSSLLDVMRRER------- 112
Query: 52 HKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSD 84
+D+ +WK RD+LRLKR W SS IPT D
Sbjct: 113 RRDKTAWKSLRDKLRLKRTATGWISSNPIPTLD 145
>gi|145340161|ref|NP_193046.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332657831|gb|AEE83231.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 259
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/118 (56%), Positives = 75/118 (63%), Gaps = 15/118 (12%)
Query: 256 EPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVE 315
E +QP PRMSLM+LLE+ D M +R DE E E + G+ V
Sbjct: 157 EEMQP--PRMSLMELLEDNDGHMYELSAR------------DEVEVEGRDGCDGGGEAVA 202
Query: 316 ENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
G E CCVCMVR KGAAFIPCGHTFCRLCSRELWVQRGNCPLCN IL++LDIF
Sbjct: 203 V-TGAAELGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 259
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKRPS-----PPPAP----AGRTLLDIIRDEDPNGKNFG 51
MS V++ R + +TL+ IL + S P P + +LLD++R E
Sbjct: 18 MSTVENGR---SSVTLEDILMAETSSFRSLTTPTTPVRNHSSSSLLDVMRRER------- 67
Query: 52 HKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPI 87
+D+ +WK RD+LRLKR W SS IPT D I
Sbjct: 68 RRDKTAWKSLRDKLRLKRTATGWISSNPIPTLDNHI 103
>gi|42570142|ref|NP_849372.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332657832|gb|AEE83232.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 265
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 71/111 (63%), Gaps = 13/111 (11%)
Query: 263 PRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIE 322
PRMSLM+LLE+ D M +R DE E E + G+ V G E
Sbjct: 168 PRMSLMELLEDNDGHMYELSAR------------DEVEVEGRDGCDGGGEAVAVT-GAAE 214
Query: 323 HNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCMVR KGAAFIPCGHTFCRLCSRELWVQRGNCPLCN IL++LDIF
Sbjct: 215 LGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 265
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
Query: 26 SPPPAPAGRTLLDIIRDEDPNGKNFGHKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSD 84
+P + +LLD++R E +D+ +WK RD+LRLKR W SS IPT D
Sbjct: 58 TPVRNHSSSSLLDVMRRER-------RRDKTAWKSLRDKLRLKRTATGWISSNPIPTLD 109
>gi|145333035|ref|NP_001078383.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186483|ref|NP_001190714.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332657833|gb|AEE83233.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332657835|gb|AEE83235.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 256
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/111 (57%), Positives = 71/111 (63%), Gaps = 13/111 (11%)
Query: 263 PRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIE 322
PRMSLM+LLE+ D M Y + DE E E + G+ V G E
Sbjct: 159 PRMSLMELLEDNDGHM------YEL------SARDEVEVEGRDGCDGGGEAVAV-TGAAE 205
Query: 323 HNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCMVR KGAAFIPCGHTFCRLCSRELWVQRGNCPLCN IL++LDIF
Sbjct: 206 LGCCVCMVRSKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNTAILQVLDIF 256
Score = 45.1 bits (105), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 19/96 (19%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKRPS-----PPPAP----AGRTLLDIIRDEDPNGKNFG 51
MS V++ R + +TL+ IL + S P P + +LLD++R E
Sbjct: 18 MSTVENGR---SSVTLEDILMAETSSFRSLTTPTTPVRNHSSSSLLDVMRRER------- 67
Query: 52 HKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPI 87
+D+ +WK RD+LRLKR W SS IPT D I
Sbjct: 68 RRDKTAWKSLRDKLRLKRTATGWISSNPIPTLDNHI 103
>gi|115441849|ref|NP_001045204.1| Os01g0917900 [Oryza sativa Japonica Group]
gi|19386767|dbj|BAB86148.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|113534735|dbj|BAF07118.1| Os01g0917900 [Oryza sativa Japonica Group]
gi|215766453|dbj|BAG98761.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 313
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 71/123 (57%), Gaps = 21/123 (17%)
Query: 264 RMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGG--- 320
+MSLM LLE++D Q EDED++ G +N G
Sbjct: 199 QMSLMALLEQSDSQWD--------SEDEDDQGHGGGGGGGGNGGGGGGGGARKNGDGDDD 250
Query: 321 ----------IEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEIL 370
+ H CCVCMVRHKGAAFIPCGHTFCRLCSRELWV RGNCPLCNGFI EIL
Sbjct: 251 EDDGEGREEEMVHVCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFIQEIL 310
Query: 371 DIF 373
DIF
Sbjct: 311 DIF 313
>gi|356559039|ref|XP_003547809.1| PREDICTED: uncharacterized protein LOC100819018 [Glycine max]
Length = 262
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/109 (59%), Positives = 76/109 (69%), Gaps = 14/109 (12%)
Query: 265 MSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHN 324
+SLMDLLEE +++M L Y V +D+D E ++ E E E E E+N
Sbjct: 168 VSLMDLLEEAEQEMDL----YRVSDDDDVAEYEKREGEGEEEKGGVV----------EYN 213
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCMVRHKGAAFIPCGHTFCR+CSRE+WV RGNCPLCN ILEILDIF
Sbjct: 214 CCVCMVRHKGAAFIPCGHTFCRMCSREIWVSRGNCPLCNNLILEILDIF 262
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 8 RDPLAGLTLDAILTNKRPSPPPAPAGR--TLLDIIRDEDPNGKNFGHKDRKSWKLFRDRL 65
RD LA L +D ++ K + R TL DIIR+E PN + DR SWK F+++L
Sbjct: 25 RDSLASLMMDDVVFKKMETEASGELSRSRTLQDIIREEKPNNSS-NATDRNSWKAFKEKL 83
Query: 66 RLKRA-GAAWTSSVRI 80
LKRA G+AW+S+ I
Sbjct: 84 WLKRAIGSAWSSATTI 99
>gi|413951527|gb|AFW84176.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 299
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/110 (55%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 264 RMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEH 323
+MSLM LL +TD Q + ++ E E DD + + H
Sbjct: 195 QMSLMALLGQTDNQWDDDEDEEEESGGGAFKKGGAGAVGDEDE-----DDCDSREDEMVH 249
Query: 324 NCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCMVRHKGAAFIPCGHTFCRLCSRELWV RGNCPLCNGFI EILDIF
Sbjct: 250 VCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFIQEILDIF 299
>gi|297790578|ref|XP_002863174.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297309008|gb|EFH39433.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 259
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 78/138 (56%), Gaps = 18/138 (13%)
Query: 236 AEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEE 295
AE E + A+ E +P PRMSLM+LLE+ D QM Y V
Sbjct: 140 AEREGRLRLGTVLAADREEMQP-----PRMSLMELLEDNDGQM------YEV-------N 181
Query: 296 EDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQ 355
E E + G + G E CCVCM+R KGAAFIPCGHTFCRLCSRELWVQ
Sbjct: 182 AREEAEAEERDCCGRGGEAVAVTGAAELGCCVCMIRSKGAAFIPCGHTFCRLCSRELWVQ 241
Query: 356 RGNCPLCNGFILEILDIF 373
RGNCPLCN IL++LDIF
Sbjct: 242 RGNCPLCNTAILQVLDIF 259
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 19/96 (19%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKRPS-----PPPAPA----GRTLLDIIRDEDPNGKNFG 51
MS V++ R + +TL+ IL + S PP+PA +LLD++R E
Sbjct: 18 MSTVENGR---SSVTLEDILMAETSSFRSLTAPPSPARNHSNSSLLDVMRRER------- 67
Query: 52 HKDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPI 87
+D+ +WK RD+LRLKRA W SS IP D PI
Sbjct: 68 RRDKTAWKSLRDKLRLKRAATGWISSNPIPNLDNPI 103
>gi|222619761|gb|EEE55893.1| hypothetical protein OsJ_04552 [Oryza sativa Japonica Group]
Length = 270
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 71/123 (57%), Gaps = 21/123 (17%)
Query: 264 RMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGG--- 320
+MSLM LLE++D Q EDED++ G +N G
Sbjct: 156 QMSLMALLEQSDSQWD--------SEDEDDQGHGGGGGGGGNGGGGGGGGARKNGDGDDD 207
Query: 321 ----------IEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEIL 370
+ H CCVCMVRHKGAAFIPCGHTFCRLCSRELWV RGNCPLCNGFI EIL
Sbjct: 208 EDDGEGREEEMVHVCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFIQEIL 267
Query: 371 DIF 373
DIF
Sbjct: 268 DIF 270
>gi|218189611|gb|EEC72038.1| hypothetical protein OsI_04939 [Oryza sativa Indica Group]
Length = 283
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 76/124 (61%), Gaps = 22/124 (17%)
Query: 264 RMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAE--------------AEAEGEYEE 309
+MSLM LLE++D Q EDED++ A G+ ++
Sbjct: 168 QMSLMALLEQSDSQWD--------SEDEDDQGHGGGGGGGGNGGGGGGGGGARKNGDGDD 219
Query: 310 EGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEI 369
+ DD E + H CCVCMVRHKGAAFIPCGHTFCRLCSRELWV RGNCPLCNGFI EI
Sbjct: 220 DEDDGEGREEEMVHVCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFIQEI 279
Query: 370 LDIF 373
LDIF
Sbjct: 280 LDIF 283
>gi|293337137|ref|NP_001168025.1| uncharacterized LOC100381751 [Zea mays]
gi|223945569|gb|ACN26868.1| unknown [Zea mays]
gi|414879016|tpg|DAA56147.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 306
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 62/110 (56%), Positives = 71/110 (64%), Gaps = 8/110 (7%)
Query: 264 RMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEH 323
+MSLM LLE+TD Q + G ++ E + + + E + V H
Sbjct: 205 QMSLMALLEQTDSQWDDDEDEEESGGGGGARKKGEGDDDEDDGEGREEEMV--------H 256
Query: 324 NCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCMVRHKGAAFIPCGHTFCRLCSRELWV RGNCPLCNGFI EILDIF
Sbjct: 257 VCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFIQEILDIF 306
>gi|357513375|ref|XP_003626976.1| Zinc finger-like protein [Medicago truncatula]
gi|355520998|gb|AET01452.1| Zinc finger-like protein [Medicago truncatula]
Length = 234
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 47/53 (88%), Positives = 50/53 (94%)
Query: 321 IEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
+EHNCCVCMVR KGAAFIPCGHTFCR+CSRELWV RGNCPLCN FILE+LDIF
Sbjct: 182 VEHNCCVCMVRDKGAAFIPCGHTFCRMCSRELWVSRGNCPLCNHFILEVLDIF 234
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 27/112 (24%)
Query: 1 MSAVQDRRDPLAGLTL-DAILTNKRPSPPPAPAGRTLLDIIRDEDPNGKNFGH------- 52
M++ + R LA L DA+L+N++ + +TLLDIIR+ +PN
Sbjct: 13 MTSTSNTRSSLASLIQNDAVLSNQKNT------NQTLLDIIRENEPNNVVVNVSVTNSSS 66
Query: 53 -------KDRKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNP 97
KDRKSWK F++ L KR + ++ + DIP +NS+P
Sbjct: 67 SSNNNVVKDRKSWKAFKELLLFKRRTSDESTHQQQQNEDIP------TNSDP 112
>gi|28629387|gb|AAO49653.1| zinc finger-like protein [Phaseolus vulgaris]
Length = 213
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 17/111 (15%)
Query: 265 MSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHN 324
+SLMDLLEE ++++ L Y V +D+ A ++E+ +D EE G +E+N
Sbjct: 118 VSLMDLLEEAEQELDL----YRVSDDD-----------AVADFEKREEDEEEKEGLVEYN 162
Query: 325 C--CVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
C CVCMVRHKGAAFIPCGHTFCR+CSRE+W R NCPLCN ILEILDIF
Sbjct: 163 CNCCVCMVRHKGAAFIPCGHTFCRMCSREIWASRRNCPLCNNLILEILDIF 213
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 4/50 (8%)
Query: 30 APAGRTLLDIIRDEDPNGKNFGHKDRKSWKLFRDRLRLKRA-GAAWTSSV 78
A RTL DIIR+E PNG KDR SWK F+++LRLKRA G AW+S+
Sbjct: 2 ASRSRTLQDIIREEKPNGD---AKDRNSWKAFKEKLRLKRAVGLAWSSAT 48
>gi|242059683|ref|XP_002458987.1| hypothetical protein SORBIDRAFT_03g043850 [Sorghum bicolor]
gi|241930962|gb|EES04107.1| hypothetical protein SORBIDRAFT_03g043850 [Sorghum bicolor]
Length = 294
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 48/53 (90%), Positives = 49/53 (92%)
Query: 321 IEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
+ H CCVCMVRHKGAAFIPCGHTFCRLCSRELWV RGNCPLCNGFI EILDIF
Sbjct: 242 MVHVCCVCMVRHKGAAFIPCGHTFCRLCSRELWVSRGNCPLCNGFIQEILDIF 294
>gi|449534144|ref|XP_004174027.1| PREDICTED: uncharacterized LOC101209945, partial [Cucumis sativus]
Length = 167
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 77/117 (65%), Gaps = 14/117 (11%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKRPSPPPAPA-----GRTLLDIIRDEDPN-GKNFGHKD 54
MS V+D R LAG TLD +L N R PP GRTLLDIIRDE+P+ GK KD
Sbjct: 1 MSMVEDGRS-LAGYTLDDVLANNRLGPPATARATEIRGRTLLDIIRDEEPSAGKGLFGKD 59
Query: 55 RKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPSSSLSNSNPRSQLIRRSSVRFQT 111
+++WK FRD+LRLKRAG+AW S+V IPTSDIP+ N RS + RR+ VRF T
Sbjct: 60 KRTWKSFRDKLRLKRAGSAWVSTVPIPTSDIPV-------HNKRSLMGRRNQVRFNT 109
>gi|357480403|ref|XP_003610487.1| hypothetical protein MTR_4g132760 [Medicago truncatula]
gi|355511542|gb|AES92684.1| hypothetical protein MTR_4g132760 [Medicago truncatula]
Length = 217
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/155 (46%), Positives = 79/155 (50%), Gaps = 38/155 (24%)
Query: 219 EAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQM 278
EA A + AAA A AE ++V EA E P R+SLM LLEET
Sbjct: 101 EAPAGSSGSGMNLAAALA-----AERQMRVSEEASGGEGATPW--RVSLMKLLEET---- 149
Query: 279 GLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFI 338
E E E+ A E D V CCVCM R KGAAFI
Sbjct: 150 -----------------EGENESNAGAVVVEGSDSV----------CCVCMGRKKGAAFI 182
Query: 339 PCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
PCGHTFCR+CSRELW+ RGNCPLCN ILEILDIF
Sbjct: 183 PCGHTFCRVCSRELWLNRGNCPLCNRSILEILDIF 217
>gi|326527041|dbj|BAK04462.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 253
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/116 (50%), Positives = 71/116 (61%), Gaps = 10/116 (8%)
Query: 264 RMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEEN------ 317
R+SLM LLE+T+RQ S A + E E+E A A +E +++ V E+
Sbjct: 142 RVSLMALLEQTERQW----SAGATAQQEQEQEPVVAVAASERSSQDQDALVPEDDAELPE 197
Query: 318 AGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
G CCVCM R KGAAFIPCGHTFCR C+REL RG CPLCN IL++LDIF
Sbjct: 198 PGRGAGCCCVCMARAKGAAFIPCGHTFCRACARELLAVRGRCPLCNAAILDVLDIF 253
>gi|30685760|ref|NP_193956.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|26451626|dbj|BAC42910.1| unknown protein [Arabidopsis thaliana]
gi|28973395|gb|AAO64022.1| unknown protein [Arabidopsis thaliana]
gi|332659182|gb|AEE84582.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 214
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 82/143 (57%), Gaps = 31/143 (21%)
Query: 231 AAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGED 290
A A EAE E++ EAEA+ + PR R+SLM LLEET ++
Sbjct: 103 ATALEAERYNRGEST---EAEAD----MTPR--RVSLMRLLEETAEKI-----------V 142
Query: 291 EDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSR 350
+D+ +E E + G G + CCVCM R KGAAFIPCGHTFCR+CSR
Sbjct: 143 DDDGKETEILTASIGTLT-----------GNDSVCCVCMGRKKGAAFIPCGHTFCRVCSR 191
Query: 351 ELWVQRGNCPLCNGFILEILDIF 373
ELW+ RG+CPLCN I+EILDIF
Sbjct: 192 ELWLNRGSCPLCNRPIIEILDIF 214
>gi|2832675|emb|CAA16775.1| hypothetical protein [Arabidopsis thaliana]
gi|7269070|emb|CAB79180.1| hypothetical protein [Arabidopsis thaliana]
Length = 202
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 82/143 (57%), Gaps = 31/143 (21%)
Query: 231 AAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGED 290
A A EAE E++ EAEA+ + PR R+SLM LLEET ++
Sbjct: 91 ATALEAERYNRGEST---EAEAD----MTPR--RVSLMRLLEETAEKI-----------V 130
Query: 291 EDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSR 350
+D+ +E E + G G + CCVCM R KGAAFIPCGHTFCR+CSR
Sbjct: 131 DDDGKETEILTASIGTLT-----------GNDSVCCVCMGRKKGAAFIPCGHTFCRVCSR 179
Query: 351 ELWVQRGNCPLCNGFILEILDIF 373
ELW+ RG+CPLCN I+EILDIF
Sbjct: 180 ELWLNRGSCPLCNRPIIEILDIF 202
>gi|356562763|ref|XP_003549638.1| PREDICTED: uncharacterized protein LOC100792613 [Glycine max]
Length = 198
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 50/66 (75%)
Query: 308 EEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFIL 367
E EG D A G + CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG CPLCN IL
Sbjct: 133 ETEGGDAAVEAVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSIL 192
Query: 368 EILDIF 373
EILDIF
Sbjct: 193 EILDIF 198
>gi|87240796|gb|ABD32654.1| Zinc finger, RING-type [Medicago truncatula]
Length = 304
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/144 (45%), Positives = 76/144 (52%), Gaps = 33/144 (22%)
Query: 231 AAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQP-RMSLMDLLEETDRQMGLEGSRYAVGE 289
AAA AE + A AE P P R+SLM LLEET
Sbjct: 193 AAALAAERQLRGPA-----AETSGGGGRMPGTPWRVSLMRLLEET--------------- 232
Query: 290 DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCS 349
E D +AE E+ G G + CCVCM R+KGAAFIPCGHTFCR+CS
Sbjct: 233 ----ENGDTVVVKAE---EKVG-----TMAGNDSVCCVCMGRNKGAAFIPCGHTFCRVCS 280
Query: 350 RELWVQRGNCPLCNGFILEILDIF 373
RELW+ RG+CPLCN I+EILDIF
Sbjct: 281 RELWLNRGSCPLCNRSIIEILDIF 304
>gi|79579715|ref|NP_680579.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|52354369|gb|AAU44505.1| hypothetical protein AT4G03965 [Arabidopsis thaliana]
gi|55740645|gb|AAV63915.1| hypothetical protein At4g03965 [Arabidopsis thaliana]
gi|332656962|gb|AEE82362.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 209
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 71/123 (57%), Gaps = 22/123 (17%)
Query: 251 EAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEE 310
E EA+ + P ++SLM LLEET R V E+E E A + G
Sbjct: 109 ETEASGSLTP--LKVSLMRLLEET-------AERVVVEENETERVTASASSTVRGV---N 156
Query: 311 GDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEIL 370
D V CCVCM R KGAAFIPCGHTFCR+CSRE+W+ RG+CPLCN I+EIL
Sbjct: 157 NDSV----------CCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEIL 206
Query: 371 DIF 373
DI+
Sbjct: 207 DIY 209
>gi|255568737|ref|XP_002525340.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223535399|gb|EEF37073.1| ubiquitin-protein ligase, putative [Ricinus communis]
Length = 193
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 24/167 (14%)
Query: 207 VVLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMS 266
+++ Q Q+S+ V A AE E +++ + A + P P +
Sbjct: 51 IIIQQRDQVSSDPTVVMGSGMNLAMALAE-------ERNLRRSSVGPAVKSAGP--PMKT 101
Query: 267 LMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCC 326
LM L+EET+ + L G DE+ + + E EGE + CC
Sbjct: 102 LMRLIEETE-GVDLMRKNKRRGSDEERIINNIIKKEKEGEND--------------WVCC 146
Query: 327 VCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
VCM R+KGAAFIPCGHTFCR+C RE+WV RG CP+CN I+EILD+F
Sbjct: 147 VCMERNKGAAFIPCGHTFCRICCREMWVNRGTCPICNRPIVEILDLF 193
>gi|225447145|ref|XP_002271383.1| PREDICTED: uncharacterized protein LOC100253430 [Vitis vinifera]
Length = 181
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Query: 308 EEEGDDVEENA---GGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNG 364
E +G D+ +N GG + CCVCM R+KGAAFIPCGHTFCR+CSRELW+ RG CP+CN
Sbjct: 113 ETDGVDLMKNRDKEGGGDGVCCVCMERNKGAAFIPCGHTFCRVCSRELWLNRGCCPICNR 172
Query: 365 FILEILDIF 373
ILEILDIF
Sbjct: 173 SILEILDIF 181
>gi|297799792|ref|XP_002867780.1| hypothetical protein ARALYDRAFT_492641 [Arabidopsis lyrata subsp.
lyrata]
gi|297313616|gb|EFH44039.1| hypothetical protein ARALYDRAFT_492641 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/146 (45%), Positives = 81/146 (55%), Gaps = 37/146 (25%)
Query: 231 AAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGED 290
A A EAE E + EAE + + PR R+SLM LLEET ++ D
Sbjct: 103 ATALEAERYNRGEPT---EAEVD----MTPR--RVSLMRLLEETAERI----------VD 143
Query: 291 EDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHN---CCVCMVRHKGAAFIPCGHTFCRL 347
ED +E + A + G + N CCVCM R KGAAFIPCGHTFCR+
Sbjct: 144 EDGKETEILTA---------------SIGTLTDNDSVCCVCMGRKKGAAFIPCGHTFCRV 188
Query: 348 CSRELWVQRGNCPLCNGFILEILDIF 373
CSRELW+ RG+CPLCN I+EILDIF
Sbjct: 189 CSRELWLNRGSCPLCNRPIIEILDIF 214
>gi|242079887|ref|XP_002444712.1| hypothetical protein SORBIDRAFT_07g026470 [Sorghum bicolor]
gi|241941062|gb|EES14207.1| hypothetical protein SORBIDRAFT_07g026470 [Sorghum bicolor]
Length = 288
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 77/114 (67%), Gaps = 4/114 (3%)
Query: 264 RMSLMDLLEETDRQM-GLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGG-- 320
R+SLM LLE+TDRQ + G+ E+E+EEEE+++ A E ++ ++E A G
Sbjct: 175 RVSLMALLEQTDRQWSAVPGATTQPEEEEEEEEEEDSAALEALEPVDDDAELEPEAAGRG 234
Query: 321 -IEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
+ CCVCM R KGAAFIPCGHTFCR C+REL RG CPLCN I+++LDIF
Sbjct: 235 VVAGCCCVCMARAKGAAFIPCGHTFCRACARELLAGRGRCPLCNAAIVDVLDIF 288
>gi|297739215|emb|CBI28866.3| unnamed protein product [Vitis vinifera]
Length = 193
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/69 (66%), Positives = 54/69 (78%), Gaps = 3/69 (4%)
Query: 308 EEEGDDVEEN---AGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNG 364
E +G D+ +N GG + CCVCM R+KGAAFIPCGHTFCR+CSRELW+ RG CP+CN
Sbjct: 125 ETDGVDLMKNRDKEGGGDGVCCVCMERNKGAAFIPCGHTFCRVCSRELWLNRGCCPICNR 184
Query: 365 FILEILDIF 373
ILEILDIF
Sbjct: 185 SILEILDIF 193
>gi|297809585|ref|XP_002872676.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297318513|gb|EFH48935.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 71/123 (57%), Gaps = 29/123 (23%)
Query: 251 EAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEE 310
E EA+ + P R+SLM LLEET ++ +EG E E A +
Sbjct: 110 ETEASGSLTPL--RVSLMRLLEETAERVVVEG---------KETERLTASSS-------- 150
Query: 311 GDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEIL 370
D V CCVCM R KGAAFIPCGHTFCR+CSRE+W+ RG+CPLCN I+EIL
Sbjct: 151 NDSV----------CCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEIL 200
Query: 371 DIF 373
DI+
Sbjct: 201 DIY 203
>gi|356522029|ref|XP_003529652.1| PREDICTED: uncharacterized protein LOC100783929 [Glycine max]
Length = 207
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 45/54 (83%)
Query: 320 GIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
G + CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG CPLCN ILEILDIF
Sbjct: 154 GNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF 207
>gi|224117976|ref|XP_002331527.1| predicted protein [Populus trichocarpa]
gi|222873751|gb|EEF10882.1| predicted protein [Populus trichocarpa]
Length = 170
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 43/60 (71%), Positives = 48/60 (80%)
Query: 314 VEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
+ E G + CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN ILEILDIF
Sbjct: 111 ITETTVGNDTVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 170
>gi|449434396|ref|XP_004134982.1| PREDICTED: uncharacterized protein LOC101211804 [Cucumis sativus]
Length = 243
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/264 (32%), Positives = 113/264 (42%), Gaps = 48/264 (18%)
Query: 115 GELASQLEDNRGAP---PQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQL 171
G L Q++ G P +R KV DS G R P L
Sbjct: 23 GFLTDQMDGIDGGGRRRPSLKQRLGFKVMGCCGATWGFRPPSDSVRDGGGEDDDRRVPDL 82
Query: 172 SRHNSTRVEAASNTVSEDNSVDPFDVAREG--TRRLAVVLAQERQLSAREAVAAQEAAEA 229
N+ R E N + + P V G LA LA ER+L A A + E
Sbjct: 83 EVMNTRREERELNR----SCLSPLSVQSPGPSGMNLATALAAERRLRASPRGAEGDIVEF 138
Query: 230 EAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRYAVGE 289
+ +++V + E P+ R+SL+ LLEET
Sbjct: 139 N--------NNDFDSAVGM---METGTPL-----RVSLLRLLEET--------------- 167
Query: 290 DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCS 349
+ D+ G E++ D+ ++ CCVCM R KGAAFIPCGHTFCR+CS
Sbjct: 168 ---DGGCDDGGGGNLGVAEKKRDETRNDS-----MCCVCMGRKKGAAFIPCGHTFCRICS 219
Query: 350 RELWVQRGNCPLCNGFILEILDIF 373
RELW+ RG+CPLCN I+EILDIF
Sbjct: 220 RELWLNRGSCPLCNRPIIEILDIF 243
>gi|255554753|ref|XP_002518414.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223542259|gb|EEF43801.1| ubiquitin-protein ligase, putative [Ricinus communis]
Length = 211
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 45/49 (91%)
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCMVR KGAAFIPCGHT+CR+CSRE+W+ RG+CPLCN ILEILD+F
Sbjct: 163 CCVCMVRKKGAAFIPCGHTYCRVCSREVWLNRGSCPLCNRSILEILDLF 211
>gi|356532309|ref|XP_003534716.1| PREDICTED: uncharacterized protein LOC100804292 [Glycine max]
Length = 196
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 47/57 (82%)
Query: 317 NAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
N G + CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG+CPLCN ILEILDIF
Sbjct: 140 NVVGNDSVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 196
>gi|147787228|emb|CAN69131.1| hypothetical protein VITISV_012047 [Vitis vinifera]
Length = 207
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 70/137 (51%), Gaps = 34/137 (24%)
Query: 257 PVQPRQPRMSLMDLLEETDRQM--------------------GLEGSRYAVGEDEDEEEE 296
PV PRM+L L +RQM G G+ V EE
Sbjct: 85 PV---SPRMNLATAL-AAERQMRAAQDVATVXVGPTNGGTSEGAPGTPLRVSLLRLLEES 140
Query: 297 DEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQR 356
D + E E +E G + CCVCM R KGAAFIPCGHTFCR+CSRELW+ R
Sbjct: 141 DGGDGEME----------KERGAGSDQLCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNR 190
Query: 357 GNCPLCNGFILEILDIF 373
G+CPLCN ILEILDIF
Sbjct: 191 GSCPLCNRSILEILDIF 207
>gi|356557951|ref|XP_003547273.1| PREDICTED: uncharacterized protein LOC100804959 [Glycine max]
Length = 209
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 65/110 (59%), Gaps = 26/110 (23%)
Query: 264 RMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEH 323
R+SLM LLEET E D A AE E + EEN G +
Sbjct: 126 RVSLMRLLEET-------------------EGGDAATAEKE-------KEKEENVLGNDS 159
Query: 324 NCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCM R KGAA IPCGHTFCR+CSRELW+ RG+CPLCN ILEILDIF
Sbjct: 160 VCCVCMGRKKGAALIPCGHTFCRVCSRELWLNRGSCPLCNRSILEILDIF 209
>gi|224068921|ref|XP_002302857.1| predicted protein [Populus trichocarpa]
gi|222844583|gb|EEE82130.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 63/108 (58%), Gaps = 21/108 (19%)
Query: 266 SLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNC 325
+LM L+EETD G + ++ D+ E E E D V C
Sbjct: 94 TLMRLIEETD------GVDWRTKNKTNKSRRDK-----EQEQGPENDWV----------C 132
Query: 326 CVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CVCM R KGAAFIPCGH FCR+CSRE+WV RG+CP+CN IL+ILDIF
Sbjct: 133 CVCMERKKGAAFIPCGHAFCRVCSREMWVNRGSCPICNRSILDILDIF 180
>gi|224108153|ref|XP_002333426.1| predicted protein [Populus trichocarpa]
gi|222836565|gb|EEE74972.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 63/108 (58%), Gaps = 21/108 (19%)
Query: 266 SLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNC 325
+LM L+EETD G + ++ D+ E E E D V C
Sbjct: 95 TLMRLIEETD------GVDWRTKNKTNKSRRDK-----EQEQGPENDWV----------C 133
Query: 326 CVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CVCM R KGAAFIPCGH FCR+CSRE+WV RG+CP+CN IL+ILDIF
Sbjct: 134 CVCMERKKGAAFIPCGHAFCRVCSREMWVNRGSCPICNRSILDILDIF 181
>gi|449444723|ref|XP_004140123.1| PREDICTED: ring finger protein 26-like [Cucumis sativus]
gi|449481137|ref|XP_004156092.1| PREDICTED: ring finger protein 26-like [Cucumis sativus]
Length = 169
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Query: 305 GEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNG 364
G+++ + + E N + CCVCM R KGAAFIPCGHTFCR+CSRELW+ RG CP+C+
Sbjct: 104 GDWKTKRKESENNG---DWMCCVCMERSKGAAFIPCGHTFCRVCSRELWLNRGTCPICSR 160
Query: 365 FILEILDIF 373
I+EILDIF
Sbjct: 161 SIIEILDIF 169
>gi|224129042|ref|XP_002320486.1| predicted protein [Populus trichocarpa]
gi|222861259|gb|EEE98801.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 44/49 (89%)
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCM R+KGAAFIPCGHTFCR+CSRE+WV RG CP+CN IL+ILDIF
Sbjct: 139 CCVCMERNKGAAFIPCGHTFCRVCSREMWVNRGCCPICNRSILDILDIF 187
>gi|118481828|gb|ABK92851.1| unknown [Populus trichocarpa]
Length = 188
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/49 (79%), Positives = 44/49 (89%)
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCM R+KGAAFIPCGHTFCR+CSRE+WV RG CP+CN IL+ILDIF
Sbjct: 140 CCVCMERNKGAAFIPCGHTFCRVCSREMWVNRGCCPICNRSILDILDIF 188
>gi|15220769|ref|NP_176427.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|7940278|gb|AAF70837.1|AC003113_4 F2401.10 [Arabidopsis thaliana]
gi|332195838|gb|AEE33959.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 204
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 48/66 (72%)
Query: 308 EEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFIL 367
E +G D G + CCVCM R KGAAFIPCGHT+CR+CSRE+W+ RG CPLCN I
Sbjct: 139 ESDGCDSTTTWLGNDPLCCVCMGREKGAAFIPCGHTYCRVCSREIWMNRGTCPLCNRSIF 198
Query: 368 EILDIF 373
++LD++
Sbjct: 199 DVLDLY 204
>gi|3319370|gb|AAC28219.1| contains similarity to C3HC4-type zinc fingers (Pfam: zf-C3HC4.hmm,
score: 32.94) [Arabidopsis thaliana]
gi|7267151|emb|CAB80819.1| putative protein [Arabidopsis thaliana]
Length = 233
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 38/49 (77%), Positives = 44/49 (89%)
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCM R KGAAFIPCGHTFCR+CSRE+W+ RG+CPLCN I+EILDI+
Sbjct: 185 CCVCMGRKKGAAFIPCGHTFCRVCSREVWLNRGSCPLCNRPIIEILDIY 233
>gi|326513252|dbj|BAK06866.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 256
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 54/90 (60%), Gaps = 18/90 (20%)
Query: 302 EAEGEYEEEG-----------DDVEENAGGIEHNCCVC-------MVRHKGAAFIPCGHT 343
+A+G ++E G DD EE+ G H MVRHKGAAFIPCGHT
Sbjct: 167 QADGHWDESGEHGGASRCGAVDDNEEDGHGERHEEEEEVQVCCVCMVRHKGAAFIPCGHT 226
Query: 344 FCRLCSRELWVQRGNCPLCNGFILEILDIF 373
FCRLCSREL RGNCPLCN FI +IL IF
Sbjct: 227 FCRLCSRELRHTRGNCPLCNVFIQDILHIF 256
>gi|414869614|tpg|DAA48171.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 250
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 64/111 (57%), Gaps = 19/111 (17%)
Query: 264 RMSLMDLLEETDRQM-GLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIE 322
R+SLM LLE+TDRQ + G A A+ E +E+ G +
Sbjct: 158 RVSLMALLEQTDRQWSAVPG------------------AAAQAEEDEDSAAAAAGRGVVA 199
Query: 323 HNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCM R KGAAFIPCGHTFCR C+REL RG CPLCN I+++LDIF
Sbjct: 200 GCCCVCMARAKGAAFIPCGHTFCRGCARELLGGRGRCPLCNAAIVDVLDIF 250
>gi|302786284|ref|XP_002974913.1| hypothetical protein SELMODRAFT_442650 [Selaginella moellendorffii]
gi|300157072|gb|EFJ23698.1| hypothetical protein SELMODRAFT_442650 [Selaginella moellendorffii]
Length = 396
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 68/133 (51%), Gaps = 12/133 (9%)
Query: 253 EAAEPVQPRQP-RMSLMDLLEE----------TDRQMGLEGSRYAVGEDEDEEEEDEAEA 301
+A+ P P R+SLM LL E +RQM S G +
Sbjct: 264 DASTATVPETPMRVSLMSLLREAEEGGSGIIFMNRQMIDRNSGGGGGGGAGGVAFESPAK 323
Query: 302 EAEGEYEEEGDDVEENAG-GIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCP 360
EA G G +V G +E CCVCM R KGAAFIPCGHTFCR C +EL RG+CP
Sbjct: 324 EATGLTGGGGSNVVTGDGITMEQTCCVCMGRQKGAAFIPCGHTFCRRCCKELQQARGSCP 383
Query: 361 LCNGFILEILDIF 373
LCN I ++L+++
Sbjct: 384 LCNKEISDVLNLY 396
>gi|302814493|ref|XP_002988930.1| hypothetical protein SELMODRAFT_447521 [Selaginella moellendorffii]
gi|300143267|gb|EFJ09959.1| hypothetical protein SELMODRAFT_447521 [Selaginella moellendorffii]
Length = 411
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Query: 253 EAAEPVQPRQP-RMSLMDLLEE----------TDRQMGLEGSRYAVGEDEDEEEEDEAEA 301
+A P P R+SLM LL E +RQM S G +
Sbjct: 279 DAGTATVPETPMRVSLMSLLREAEEGGSGIIFMNRQMIDRNSGGGGGGGAGGVAFESPAK 338
Query: 302 EAEGEYEEEGDDVEENAG-GIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCP 360
EA G G +V G +E CCVCM R KGAAFIPCGHTFCR C +EL RG+CP
Sbjct: 339 EATGLTGGGGSNVVTGDGITMEQTCCVCMGRQKGAAFIPCGHTFCRRCCKELQQARGSCP 398
Query: 361 LCNGFILEILDIF 373
LCN I ++L+++
Sbjct: 399 LCNKEISDVLNLY 411
>gi|297840299|ref|XP_002888031.1| hypothetical protein ARALYDRAFT_893249 [Arabidopsis lyrata subsp.
lyrata]
gi|297333872|gb|EFH64290.1| hypothetical protein ARALYDRAFT_893249 [Arabidopsis lyrata subsp.
lyrata]
Length = 202
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 42/54 (77%)
Query: 320 GIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
G + CCVC R KGAAFIPCGH +CR+CSRE+W+ RG CPLCN I ++LD++
Sbjct: 149 GSDTLCCVCTGREKGAAFIPCGHMYCRVCSREIWMNRGTCPLCNRSIFDVLDLY 202
>gi|357154213|ref|XP_003576709.1| PREDICTED: uncharacterized protein LOC100842680 [Brachypodium
distachyon]
Length = 163
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/110 (44%), Positives = 62/110 (56%), Gaps = 12/110 (10%)
Query: 264 RMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEH 323
R+SLM LLE+ ++Q + G E+ A +E E + G A +
Sbjct: 66 RVSLMALLEQAEQQW----TAATAGGGAWTRVEEVAASE---EGRKGG-----GASSVGG 113
Query: 324 NCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCM R K AAFIPCGHTFCR C+REL RG CPLCN I E+L++F
Sbjct: 114 RCCVCMARGKSAAFIPCGHTFCRACARELRAGRGRCPLCNAAIREVLNLF 163
>gi|357447765|ref|XP_003594158.1| hypothetical protein MTR_2g025080 [Medicago truncatula]
gi|355483206|gb|AES64409.1| hypothetical protein MTR_2g025080 [Medicago truncatula]
Length = 278
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 67/134 (50%), Gaps = 33/134 (24%)
Query: 231 AAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQP-RMSLMDLLEETDRQMGLEGSRYAVGE 289
AAA AE + A AE P P R+SLM LLEET
Sbjct: 102 AAALAAERQLRGPA-----AETSGGGGRMPGTPWRVSLMRLLEET--------------- 141
Query: 290 DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCS 349
E D +AE E+ G G + CCVCM R+KGAAFIPCGHTFCR+CS
Sbjct: 142 ----ENGDTVVVKAE---EKVG-----TMAGNDSVCCVCMGRNKGAAFIPCGHTFCRVCS 189
Query: 350 RELWVQRGNCPLCN 363
RELW+ RG+CPL N
Sbjct: 190 RELWLNRGSCPLSN 203
>gi|297727133|ref|NP_001175930.1| Os09g0505000 [Oryza sativa Japonica Group]
gi|255679041|dbj|BAH94658.1| Os09g0505000 [Oryza sativa Japonica Group]
Length = 209
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 58/109 (53%), Gaps = 7/109 (6%)
Query: 265 MSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHN 324
+SLM LLE+ +RQ + D A+ A A G+
Sbjct: 108 VSLMALLEQAERQ-------WTTAAAGDASRRRVADDHAAAAEAGTNKGFAGAAAGVGGR 160
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVCM R K AAFIPCGHTFCR C+REL V RG CPLCN I ++L++F
Sbjct: 161 CCVCMARGKAAAFIPCGHTFCRACARELRVGRGRCPLCNAAIHDVLNLF 209
>gi|125562273|gb|EAZ07721.1| hypothetical protein OsI_29976 [Oryza sativa Indica Group]
Length = 263
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 38/47 (80%)
Query: 327 VCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
VCM R KGAAFIPCGHTFCR C+REL RG CPLCN IL++LDIF
Sbjct: 217 VCMARAKGAAFIPCGHTFCRTCARELLAGRGRCPLCNAAILDVLDIF 263
>gi|357148550|ref|XP_003574809.1| PREDICTED: uncharacterized protein LOC100839842 [Brachypodium
distachyon]
Length = 271
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/116 (48%), Positives = 64/116 (55%), Gaps = 15/116 (12%)
Query: 264 RMSLMDLLEETDRQMG------LEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEEN 317
R+SLM LLE+T+RQ E EE+D+AE E D
Sbjct: 165 RVSLMALLEQTERQWSSSAHDEPEPEPAEEPSQPPREEDDDAEPEP---------DASAA 215
Query: 318 AGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
AG CCVCM R KGAAFIPCGHTFCR C+REL RG CPLCN IL++L IF
Sbjct: 216 AGRGAGCCCVCMARAKGAAFIPCGHTFCRACARELLAGRGRCPLCNAAILDVLHIF 271
>gi|125562272|gb|EAZ07720.1| hypothetical protein OsI_29975 [Oryza sativa Indica Group]
Length = 263
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 38/47 (80%)
Query: 327 VCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
VCM R KGAAFIPCGHTFCR C+REL RG CPLCN IL++LDIF
Sbjct: 217 VCMARAKGAAFIPCGHTFCRTCARELLAGRGRCPLCNAAILDVLDIF 263
>gi|42407637|dbj|BAD08751.1| zinc finger protein family-like [Oryza sativa Japonica Group]
Length = 263
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 38/47 (80%)
Query: 327 VCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
VCM R KGAAFIPCGHTFCR C+REL RG CPLCN IL++LDIF
Sbjct: 217 VCMARAKGAAFIPCGHTFCRTCARELLAGRGRCPLCNAAILDVLDIF 263
>gi|242049758|ref|XP_002462623.1| hypothetical protein SORBIDRAFT_02g029170 [Sorghum bicolor]
gi|241926000|gb|EER99144.1| hypothetical protein SORBIDRAFT_02g029170 [Sorghum bicolor]
Length = 208
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/49 (69%), Positives = 39/49 (79%)
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVC+ R KGAAFIPCGHTFCR C+REL RG CPLCN I E+L++F
Sbjct: 160 CCVCVARGKGAAFIPCGHTFCRACARELRAGRGRCPLCNATIREVLNLF 208
>gi|222640903|gb|EEE69035.1| hypothetical protein OsJ_28017 [Oryza sativa Japonica Group]
Length = 202
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 38/47 (80%)
Query: 327 VCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
VCM R KGAAFIPCGHTFCR C+REL RG CPLCN IL++LDIF
Sbjct: 156 VCMARAKGAAFIPCGHTFCRTCARELLAGRGRCPLCNAAILDVLDIF 202
>gi|222640902|gb|EEE69034.1| hypothetical protein OsJ_28016 [Oryza sativa Japonica Group]
Length = 104
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/47 (74%), Positives = 38/47 (80%)
Query: 327 VCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
VCM R KGAAFIPCGHTFCR C+REL RG CPLCN IL++LDIF
Sbjct: 58 VCMARAKGAAFIPCGHTFCRTCARELLAGRGRCPLCNAAILDVLDIF 104
>gi|168014465|ref|XP_001759772.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688902|gb|EDQ75276.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 744
Score = 81.3 bits (199), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 70/124 (56%), Gaps = 23/124 (18%)
Query: 251 EAEAAEPVQPRQPR-MSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEE 309
EAE P + PR +SL+ LL + + E E E EAE +E
Sbjct: 643 EAEILTPATEQPPRRVSLLSLLNQ-------------------DMENVENELEAEKGVDE 683
Query: 310 EGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEI 369
+ D V E ++ CCVCMV HKGAAFIPCGHTFCR C RE+ +G+CPLCN I+++
Sbjct: 684 QDDHVTEQ---LDPLCCVCMVGHKGAAFIPCGHTFCRRCCREVRRSKGSCPLCNKAIIDV 740
Query: 370 LDIF 373
L+I+
Sbjct: 741 LNIY 744
>gi|168030575|ref|XP_001767798.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680880|gb|EDQ67312.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 853
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 49/78 (62%), Gaps = 9/78 (11%)
Query: 295 EEDEAEAEAE-GEYEEEGDD-VEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSREL 352
E DE A+AE G YE+E DD V E ++ CCVCMV HKGAAFIPCGHTFCR C RE
Sbjct: 745 EMDENGAQAERGGYEDEPDDHVTEQ---LDPMCCVCMVGHKGAAFIPCGHTFCRRCCREG 801
Query: 353 WVQRGNCPLCNGFILEIL 370
+ G C G L++
Sbjct: 802 VFELG----CMGADLDLY 815
>gi|414589898|tpg|DAA40469.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 192
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 331 RHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
R KGAAF+PCGHTFCR C+R++ RG CPLCN I E+L++F
Sbjct: 150 RGKGAAFVPCGHTFCRACARQVRAGRGRCPLCNATIREVLNLF 192
>gi|297838327|ref|XP_002887045.1| hypothetical protein ARALYDRAFT_338867 [Arabidopsis lyrata subsp.
lyrata]
gi|297332886|gb|EFH63304.1| hypothetical protein ARALYDRAFT_338867 [Arabidopsis lyrata subsp.
lyrata]
Length = 287
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 1 MSAVQDRRDPLAGLTLDAILTNKRPSPPPAP-----AGRTLLDII-RDEDPNGKNFGHKD 54
MS V+ R GLTL+AIL + + P P + RTLLD++ RD + ++ ++D
Sbjct: 57 MSTVETNRSSSTGLTLEAILLADKNTTSPQPPSNNQSNRTLLDVMQRDHRHDDRH--NRD 114
Query: 55 RKSWKLFRDRLRLKRAGAAWTSSVRIPTSDIPIPS 89
+ +W+ R++LRLKR W SS IPT D PIP+
Sbjct: 115 KTTWETLREKLRLKRNATVWISSNPIPTLDNPIPT 149
>gi|302772599|ref|XP_002969717.1| hypothetical protein SELMODRAFT_440912 [Selaginella moellendorffii]
gi|300162228|gb|EFJ28841.1| hypothetical protein SELMODRAFT_440912 [Selaginella moellendorffii]
Length = 2355
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 321 IEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
+E CC+C K AA +PCGH C+ C ++ QR CP+CN +I +L ++
Sbjct: 2302 LEDCCCICFDVPKDAALVPCGHRMCKSCGEQIRRQRAKCPICNRYIDAVLALY 2354
>gi|302799126|ref|XP_002981322.1| hypothetical protein SELMODRAFT_420896 [Selaginella moellendorffii]
gi|300150862|gb|EFJ17510.1| hypothetical protein SELMODRAFT_420896 [Selaginella moellendorffii]
Length = 2359
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 321 IEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
+E CC+C K AA +PCGH C+ C ++ QR CP+CN +I +L ++
Sbjct: 2306 LEDCCCICFDVPKDAALVPCGHRMCKSCGEQIRRQRAKCPICNRYIDAVLALY 2358
>gi|291396135|ref|XP_002714699.1| PREDICTED: ring finger protein 8 [Oryctolagus cuniculus]
Length = 555
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 110/256 (42%), Gaps = 21/256 (8%)
Query: 117 LASQLEDNRGAPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQLSRHNS 176
L S+ D + P+ + S S+P + HH + + +P+ S +L +
Sbjct: 196 LPSKYLDPKLTSPEAQEKVSGADVYSTPPKIIAPHH--NKQKGSNPSTSQSSLELFKMTM 253
Query: 177 TRVEAASNTVSEDNSVDPFDVAREGTR-RLAVVLAQERQLSAREAVAAQEAAEAEAAAAE 235
+R+ + E + +V R+ + ++ E +L A ++ E A+ +A E
Sbjct: 254 SRILKLKTELQE-KQIAVLNVKRQTQKGNSKTIVKMEEELQALQSQLCAEQAQQQARMEE 312
Query: 236 AEAEAEAEASVQVEAEAEAAEP------VQPRQPRMSLMDLLE--ETDRQMGLEGSRYAV 287
E + E + E E E VQ Q +LM+ L + D + ++ +
Sbjct: 313 LEKTFQEEEQHLQDLEKEQGEEDLKQQLVQALQEHRALMEELNRSKKDFEAIIQAKNREL 372
Query: 288 GEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRL 347
+ ++E+E+ +A+ E E + +DV EN E C +C A + C H+FC
Sbjct: 373 EQTKEEKEKVQAQKE---EVLSQMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSY 425
Query: 348 CSRELWVQRG-NCPLC 362
C +E W++R CP+C
Sbjct: 426 CIKE-WMKRKIECPIC 440
>gi|323452745|gb|EGB08618.1| hypothetical protein AURANDRAFT_71588 [Aureococcus anophagefferens]
Length = 2650
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
C VC+ K AAF+PCGH CR C+ CP+C +++++ +F
Sbjct: 2601 CAVCLDATKNAAFVPCGHRACRACADRCRAGDAGCPVCRAPVVDVIRVF 2649
>gi|348575892|ref|XP_003473722.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Cavia porcellus]
Length = 847
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 23/260 (8%)
Query: 115 GELASQ---LEDNRGAPPQFARRPSSKVASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQL 171
GE+ASQ D APP+ R+ + A + PGP ++ + P+ S +L
Sbjct: 193 GEMASQPRECLDPGLAPPEAGRK--TMRARTYPGPPKAPQLYPKKQKASKPSASQSSLEL 250
Query: 172 SRHNSTRVEAASNTVSEDNS--VDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEA 229
+ +R+ + E ++ + R G R V + ER+L +A E A+
Sbjct: 251 FKVTMSRIMKLKKQLQEKQVAVMNVKNQTRAGNARRIVRM--ERELQELQAQLCTEQAQQ 308
Query: 230 EAAAAEAEAEAEAEASVQVEAEAEAAEPV-----QPRQPRMSLMDLLEET--DRQMGLEG 282
+A + E + E + E E E + Q Q +LM+ L + D + ++
Sbjct: 309 QARVEQLEKTFQEEENHLQGLEKEQVEDLKQQLAQALQEHQALMEELNRSKKDFETIIQA 368
Query: 283 SRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGH 342
+ + ++E+E+ +A+ E E +DV EN E C +C A + C H
Sbjct: 369 KNKELEQTKEEKEKVQAQKE---EVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAH 421
Query: 343 TFCRLCSRELWVQRGNCPLC 362
+FC C E ++ CP+C
Sbjct: 422 SFCSYCISEWMKRKVECPIC 441
>gi|290970806|ref|XP_002668263.1| predicted protein [Naegleria gruberi]
gi|284081563|gb|EFC35519.1| predicted protein [Naegleria gruberi]
Length = 284
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 322 EHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
E CC+CM R+K AAF PCGH FC C CP+C
Sbjct: 235 EQRCCICMDRNKNAAFNPCGHVFCETCCSHC---LSKCPIC 272
>gi|338718418|ref|XP_001500360.3| PREDICTED: e3 ubiquitin-protein ligase RNF8-like [Equus caballus]
Length = 518
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 28/254 (11%)
Query: 128 PPQF------ARRPSSKV--ASSSPGPTQSSHHEDSPEGEGS-PTRSSRQPQLSRHNSTR 178
PP++ + PS K A SPGP + + + + S P+ S L R +R
Sbjct: 181 PPEYLDPKLTSLEPSEKTTGAHVSPGPVEVVELQQKKQKKTSNPSASQSSLDLFRVTMSR 240
Query: 179 VEAASNTVSEDNSVDPFDVAR---EGTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAE 235
+ T ++ V +V + EG ++ V + QE Q + A Q +A E
Sbjct: 241 I-LKLKTQMQEKQVAVLNVKKQTQEGNSKMIVKMEQELQDLQSQLCAEQAQQQARVEQLE 299
Query: 236 AEAEAEAEASVQVEAEA----EAAEPVQPRQPRMSLMDLLE--ETDRQMGLEGSRYAVGE 289
+ E + +E E + Q Q +LM+ L + D + L+ + +
Sbjct: 300 KTFQEEEQHLQGLEKEQGEEDLKQQLAQALQEHQALMEELNRSKKDFEAILQAKNKELEQ 359
Query: 290 DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCS 349
++E+E+ +A+ E E +DV EN E C +C A + C H+FC C
Sbjct: 360 TKEEKEKVQAQKE---EVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSYCI 412
Query: 350 RELWVQRG-NCPLC 362
E W++R CP+C
Sbjct: 413 NE-WMKRKIECPIC 425
>gi|449456168|ref|XP_004145822.1| PREDICTED: uncharacterized protein LOC101214410 [Cucumis sativus]
Length = 841
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 325 CCVCMVRHKGAAFIPCGHT-FCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CC+C H A CGH C C+ EL RG CP+C+ ILE++ +
Sbjct: 790 CCICCDNHIDALLYRCGHMCTCSKCANELVDARGKCPMCHAPILEVIRAY 839
>gi|449496292|ref|XP_004160095.1| PREDICTED: uncharacterized LOC101214410 [Cucumis sativus]
Length = 611
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 325 CCVCMVRHKGAAFIPCGHT-FCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CC+C H A CGH C C+ EL RG CP+C+ ILE++ +
Sbjct: 560 CCICCDNHIDALLYRCGHMCTCSKCANELVDARGKCPMCHAPILEVIRAY 609
>gi|330843930|ref|XP_003293894.1| hypothetical protein DICPUDRAFT_158816 [Dictyostelium purpureum]
gi|325075721|gb|EGC29575.1| hypothetical protein DICPUDRAFT_158816 [Dictyostelium purpureum]
Length = 489
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 325 CCVCM--VRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
CC+C + A+FI C H FC C R+ +Q CPLC
Sbjct: 339 CCICYNKINTTNASFIDCFHMFCYDCIRKWCIQNNTCPLC 378
>gi|330799524|ref|XP_003287794.1| hypothetical protein DICPUDRAFT_151957 [Dictyostelium purpureum]
gi|325082204|gb|EGC35694.1| hypothetical protein DICPUDRAFT_151957 [Dictyostelium purpureum]
Length = 590
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 325 CCVCMVR--HKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
CC+C ++ A+FI C H FC C R+ +Q CPLC
Sbjct: 439 CCICYIKIDTTNASFIDCFHMFCYDCIRKWCIQNNTCPLC 478
>gi|349603614|gb|AEP99407.1| E3 ubiquitin-protein ligase RNF8-like protein, partial [Equus
caballus]
Length = 323
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 106/254 (41%), Gaps = 28/254 (11%)
Query: 128 PPQF------ARRPSSKV--ASSSPGPTQSSHHEDSPEGEGS-PTRSSRQPQLSRHNSTR 178
PP++ + PS K A SPGP + + + + S P+ S L R +R
Sbjct: 34 PPEYLDPKLTSFEPSEKTTGAHVSPGPVEVVELQQKKQKKTSNPSASQSSLDLFRVTMSR 93
Query: 179 VEAASNTVSEDNSVDPFDVAR---EGTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAE 235
+ T ++ V +V + EG ++ V + QE Q + A Q +A E
Sbjct: 94 I-LKLKTQMQEKQVAVLNVKKQTQEGNSKMIVKMEQELQDLQSQLCAEQAQQQARVEQLE 152
Query: 236 AEAEAEAEASVQVEAEA----EAAEPVQPRQPRMSLMDLLE--ETDRQMGLEGSRYAVGE 289
+ E + +E E + Q Q +LM+ L + D + L+ + +
Sbjct: 153 KTFQEEEQHLQGLEKEQGEEDLKQQLAQALQEHQALMEELNRSKKDFEAILQAKNKELEQ 212
Query: 290 DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCS 349
++E+E+ +A+ E E +DV EN E C +C A + C H+FC C
Sbjct: 213 TKEEKEKVQAQKE---EVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSYCI 265
Query: 350 RELWVQRG-NCPLC 362
E W++R CP+C
Sbjct: 266 NE-WMKRKIECPIC 278
>gi|30680527|ref|NP_196066.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334187422|ref|NP_001190224.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332003363|gb|AED90746.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332003364|gb|AED90747.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 863
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 325 CCVCMVRHKGAAFIPCGHT-FCRLCSRELWVQRGNCPLCNGFILEILDIF 373
CCVC H A CGH C C+ EL G CPLC I+E++ +
Sbjct: 811 CCVCCDNHIDALLYRCGHMCTCSKCANELVRNGGKCPLCRAPIIEVIRAY 860
>gi|359478847|ref|XP_002279069.2| PREDICTED: uncharacterized protein LOC100258653 [Vitis vinifera]
gi|297745897|emb|CBI15953.3| unnamed protein product [Vitis vinifera]
Length = 485
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 6/106 (5%)
Query: 270 LLEETDRQMGLEGSRY-AVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVC 328
LL D GS Y ++ DE++ EE A + EG +EG EN G C +C
Sbjct: 382 LLLPKDDDASSWGSSYDSISHDEEDLEEWLAVSSLEGNISKEG----ENNGNPRRLCVIC 437
Query: 329 MVRHKGAAFIPCGHT-FCRLCSRELWVQRGNCPLCNGFILEILDIF 373
+ F+PCGH C C + + G+CP+C + ++ IF
Sbjct: 438 CDAPRDCFFLPCGHCAACFTCGTRISEEAGSCPICRKKMKKVRKIF 483
>gi|255574357|ref|XP_002528092.1| ubiquitin-protein ligase, putative [Ricinus communis]
gi|223532481|gb|EEF34271.1| ubiquitin-protein ligase, putative [Ricinus communis]
Length = 460
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 270 LLEETDRQMGLEGSRY-AVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVC 328
LL D + GS Y +V DE++ E A EG+ +G EN + C +C
Sbjct: 357 LLSSKDDDLSSWGSSYDSVSNDEEDLEHLLASGSLEGKLSGDG----ENVNNTQRLCAIC 412
Query: 329 MVRHKGAAFIPCGHTF-CRLCSRELWVQRGNCPLCNGFILEILDIF 373
+ F+PCGH C C + G CP+C+ + ++ IF
Sbjct: 413 FDAPRDCFFLPCGHCIACFECGTRIVEAGGTCPVCHKNMKKVRKIF 458
>gi|426251057|ref|XP_004019248.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Ovis aries]
Length = 603
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 13/230 (5%)
Query: 140 ASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAR 199
A +PGP + + +P+ S +L + +R+ T ++ V +V +
Sbjct: 335 AHVNPGPAKVIELHHKKKKASNPSASQSNLELFKVTMSRI-LMLRTQMQEKQVAVLNVKK 393
Query: 200 E---GTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAE-AEAA 255
+ G+ + V + QE Q + A Q +A E + E + +E E E
Sbjct: 394 QTKKGSSKKIVKMEQELQDLQSQLCAEQAQQQARVEQLEKTIQEEQQHLQGLEKEEGEED 453
Query: 256 EPVQPRQPRMSLMDLLEETDR-QMGLEGSRYAVGED--EDEEEEDEAEAEAEGEYEEEGD 312
Q Q L+EE +R + E A ++ + +EE+++ +A+ E E +
Sbjct: 454 LKQQLAQALQEYRSLMEELNRSKKNFEAIIQAKDKELEQTKEEKEKVQAQKE-EVLSHMN 512
Query: 313 DVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
DV EN E C +C A + C H+FC C E ++ CP+C
Sbjct: 513 DVLEN----ELQCIICSEYFVEAVTLNCAHSFCSYCINEWMKRKVECPIC 558
>gi|118383219|ref|XP_001024764.1| hypothetical protein TTHERM_00237340 [Tetrahymena thermophila]
gi|89306531|gb|EAS04519.1| hypothetical protein TTHERM_00237340 [Tetrahymena thermophila
SB210]
Length = 904
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 322 EHNCCVCMVRHKGAAFIPCGHT-FCRLCSRELWVQRGNCPLCNGFILEILDI 372
E NC +C + + F+ CGH C CS ++W G C LC I +IL I
Sbjct: 820 EQNCLICFQNSQDSVFMNCGHGGICYDCSLDIWKITGECYLCREKIKQILQI 871
>gi|312162855|ref|YP_003933840.1| ubiquitin E3 ligase ICP0 [Saimiriine herpesvirus 1]
gi|308096488|gb|ADO13828.1| ubiquitin E3 ligase ICP0 [Saimiriine herpesvirus 1]
Length = 729
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 325 CCVCMVRHKGAAF---IPCGHTFCRLCSRELWVQRGNCPLCNGFI-LEILDI 372
C +CM F PC H +C C R VQR CP+CNG + I++I
Sbjct: 199 CPICMDPITELTFCKTFPCLHPYCLPCMRTWLVQRNTCPVCNGHVSFLIVNI 250
>gi|402866878|ref|XP_003897600.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Papio anubis]
Length = 486
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 116/283 (40%), Gaps = 26/283 (9%)
Query: 95 SNPRSQLIR---RSSVRFQTNPAGELASQLEDNRGAPPQFARRPSSKVASSSPGP----T 147
SN +S++ + SS ++ GE+AS +N P A PS K + P
Sbjct: 170 SNLKSKINKVSCESSQSVKSQGKGEVASTPSENLD-PKLTALEPSKKTTGAPIYPGFPIV 228
Query: 148 QSSHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAV 207
HHE + RS + +++ R++ E ++ ++G + V
Sbjct: 229 TEVHHEQKASNSSASQRSLQMFKVTMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKIV 287
Query: 208 VLAQE-----RQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQ 262
+ QE QL A +A + E E E + + Q E + + + Q Q
Sbjct: 288 RMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGLETAQGEEDLKQ-QLAQALQ 346
Query: 263 PRMSLMDLLE--ETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGG 320
+LM+ L + D + ++ + + ++E+E+ +A+ E E +DV EN
Sbjct: 347 EHWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKE---EVLSHMNDVLEN--- 400
Query: 321 IEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
E C +C A + C H+FC C E W++R CP+C
Sbjct: 401 -ELQCIICSEYFIEAVTLNCAHSFCSYCINE-WMKRKIECPIC 441
>gi|18397483|ref|NP_566274.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|75301222|sp|Q8LA32.1|LUL4_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase LUL4; AltName:
Full=Protein LOG2-LIKE UBIQUITIN LIGASE 4; AltName:
Full=RING finger protein 208
gi|21593638|gb|AAM65605.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|115311453|gb|ABI93907.1| At3g06140 [Arabidopsis thaliana]
gi|332640829|gb|AEE74350.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 359
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 314 VEENAGGIEHNCCVCMVRHKGAAFIPCGH-TFCRLCSRELWVQRGNCPLCNGFILEILDI 372
++E+ G E C +CM K A +PC H C C++EL +Q CP+C I E+L+I
Sbjct: 293 LDESGSGTE--CVICMTEAKDTAVLPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEI 350
>gi|355561656|gb|EHH18288.1| hypothetical protein EGK_14855, partial [Macaca mulatta]
Length = 483
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 18/279 (6%)
Query: 95 SNPRSQLIR---RSSVRFQTNPAGELASQLEDNRGAPPQFARRPSSKVASSSPGP----T 147
SN +S++ + SS ++ GE+AS +N P A PS+K + P
Sbjct: 170 SNLKSKINKVSCESSQSVKSQGKGEVASTPSENLD-PKLTALEPSTKTTGAPIYPGFPIV 228
Query: 148 QSSHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAV 207
HHE + RS + +++ R++ E ++ ++G + V
Sbjct: 229 TEVHHEQKASNSSASQRSLQMFKVTMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKIV 287
Query: 208 VLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMS 266
+ QE Q + A Q +A E + E + +E A+ E Q Q
Sbjct: 288 RMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQE 347
Query: 267 LMDLLEETDR-QMGLEGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHN 324
L+EE +R + E A ++ ++ +E++ + +A+ E +DV EN E
Sbjct: 348 HWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLEN----ELQ 403
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
C +C A + C H+FC C E W++R CP+C
Sbjct: 404 CIICSEYFIEAVTLNCAHSFCSYCINE-WMKRKIECPIC 441
>gi|6862918|gb|AAF30307.1|AC018907_7 putative RING zinc finger protein [Arabidopsis thaliana]
Length = 546
Score = 45.1 bits (105), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 278 MGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAF 337
+ +EG RY + E + A ++E+ G E C +CM K A
Sbjct: 456 LWIEGVRYELRELYGSTTQGAASG------------LDESGSGTE--CVICMTEAKDTAV 501
Query: 338 IPCGH-TFCRLCSRELWVQRGNCPLCNGFILEILDI 372
+PC H C C++EL +Q CP+C I E+L+I
Sbjct: 502 LPCRHLCMCSDCAKELRLQSNKCPICRQPIEELLEI 537
>gi|355748520|gb|EHH53003.1| hypothetical protein EGM_13555 [Macaca fascicularis]
Length = 485
Score = 45.1 bits (105), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 18/279 (6%)
Query: 95 SNPRSQLIR---RSSVRFQTNPAGELASQLEDNRGAPPQFARRPSSKVASSSPGP----T 147
SN +S++ + SS ++ GE+AS +N P A PS+K + P
Sbjct: 170 SNLKSKINKVSCESSQSVKSQGKGEVASTPSENLD-PKLTALEPSTKTTGAPIYPGFPIV 228
Query: 148 QSSHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAV 207
HHE + RS + +++ R++ E ++ ++G + V
Sbjct: 229 TEVHHEQKASNSSASQRSLQMFKVTMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKIV 287
Query: 208 VLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMS 266
+ QE Q + A Q +A E + E + +E A+ E Q Q
Sbjct: 288 RMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQE 347
Query: 267 LMDLLEETDR-QMGLEGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHN 324
L+EE +R + E A ++ ++ +E++ + +A+ E +DV EN E
Sbjct: 348 HWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLEN----ELQ 403
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
C +C A + C H+FC C E W++R CP+C
Sbjct: 404 CIICSEYFIEAVTLNCAHSFCSYCINE-WMKRKIECPIC 441
>gi|148665686|gb|EDK98102.1| mCG128616, isoform CRA_a [Mus musculus]
Length = 777
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 13/122 (10%)
Query: 260 PRQPRMSLMDLLEETDRQMGLEGSRYAVGE------DEDEEEEDEAEA-----EAEGEYE 308
P+Q R L D L++ G SR E E ++ E A A+G
Sbjct: 641 PQQTRKELTDFLQQLKDSHGKSVSRLTFDEIVYKISQMIEPKKSEPNAPQDPKSAQGSAT 700
Query: 309 EEGDDVEENAGGIEHNCCVCM--VRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFI 366
EGD +N E C +C + + + +PC H F C R +Q+G CP C +
Sbjct: 701 WEGDKDMDNEEEEEEPCVICHENLSPENLSVLPCAHKFHSQCIRPWLMQQGTCPTCRLHV 760
Query: 367 LE 368
L+
Sbjct: 761 LQ 762
>gi|390346100|ref|XP_788216.3| PREDICTED: E3 ubiquitin-protein ligase RNF8-like
[Strongylocentrotus purpuratus]
Length = 646
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 69/167 (41%), Gaps = 22/167 (13%)
Query: 213 RQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLE 272
+QL+ ++ +E E + E+ E EA+ Q+EAE +A ++ +Q +
Sbjct: 367 KQLAEKDRSMKEEQEEMQRKLEESIREKEAQMLAQLEAEKQAV--IEEKQKVEEKLQTAL 424
Query: 273 ETDRQMGLEGSRYAV------GEDEDEEEEDEAEAEAEGEYEEEGDDVEE---------- 316
E D+ GLE + + E E + EDE EA EEE +E
Sbjct: 425 EKDK--GLEEEKQRLDEIIQQKEKEKTDMEDEMEASRLEREEEEKVKIENAKRAALDDFT 482
Query: 317 NAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGN-CPLC 362
N E C +C A + C H+FC C W +R N CP C
Sbjct: 483 NVMENEFQCSICSELFIQATTLNCSHSFCAYCIH-TWFKRKNECPNC 528
>gi|388453485|ref|NP_001252758.1| ring finger protein 8, E3 ubiquitin protein ligase [Macaca mulatta]
gi|380817740|gb|AFE80744.1| E3 ubiquitin-protein ligase RNF8 isoform 1 [Macaca mulatta]
gi|383422609|gb|AFH34518.1| E3 ubiquitin-protein ligase RNF8 isoform 1 [Macaca mulatta]
Length = 486
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 115/279 (41%), Gaps = 18/279 (6%)
Query: 95 SNPRSQLIR---RSSVRFQTNPAGELASQLEDNRGAPPQFARRPSSKVASSSPGP----T 147
SN +S++ + SS ++ GE+AS +N P A PS+K + P
Sbjct: 170 SNLKSKINKVSCESSQSVKSQGKGEVASTPSENLD-PKLTALEPSTKTTGAPIYPGFPIV 228
Query: 148 QSSHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAV 207
HHE + RS + +++ R++ E ++ ++G + V
Sbjct: 229 TEVHHEQKASNSSASQRSLQMFKVTMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKIV 287
Query: 208 VLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMS 266
+ QE Q + A Q +A E + E + +E A+ E Q Q
Sbjct: 288 RMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQE 347
Query: 267 LMDLLEETDR-QMGLEGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHN 324
L+EE +R + E A ++ ++ +E++ + +A+ E +DV EN E
Sbjct: 348 HWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLEN----ELQ 403
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
C +C A + C H+FC C E W++R CP+C
Sbjct: 404 CIICSEYFIEAVTLNCAHSFCSYCINE-WMKRKIECPIC 441
>gi|353240438|emb|CCA72308.1| hypothetical protein PIIN_06242 [Piriformospora indica DSM 11827]
Length = 872
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 69/167 (41%), Gaps = 30/167 (17%)
Query: 230 EAAAAEAEAE--------AEAEASVQVEAEAEAA-EPVQPRQPRMSL---MDLLE-ETDR 276
E+AAAE ++E E E++ V A A++A PV P SL D++E E +R
Sbjct: 2 ESAAAEVQSELRATDDPAIEHESASPVLATAQSAPSPVSPSTSTKSLKRTADMMEDEEER 61
Query: 277 QMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAG----------GIEHNC- 325
Q + R V +D + E A + EN G G+E +C
Sbjct: 62 Q---DNKRKRVDDDNGDRPEASTSRNAVATDGTDASKPVENDGTDANRLVEDMGLELSCG 118
Query: 326 CVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG--NCPLCNGFILEIL 370
C + + +PC H FC C LW Q G CP C I I+
Sbjct: 119 CCAALCYNPVIVLPCQHYFCGSCCT-LWTQTGGTTCPSCRSNISSIV 164
>gi|156405274|ref|XP_001640657.1| predicted protein [Nematostella vectensis]
gi|156227792|gb|EDO48594.1| predicted protein [Nematostella vectensis]
Length = 974
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 29/152 (19%)
Query: 219 EAVAAQEAAEAEAAAAEAEA---EAEAEASVQVEAEAEAAEPVQPRQPRMS-----LMDL 270
E + AQ+A + E AE EA E + E S+ A E + ++ + R+ L L
Sbjct: 364 EKLLAQKA-DLEKVIAEKEAQQKELQQELSIHKSA-TEKLKDLEENEKRLVTSVQELQSL 421
Query: 271 LEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMV 330
+E+ DR++ + E +AE EA EE +D E +C VC
Sbjct: 422 MEKKDRELL-----------KQMEVTKKAEEEARKSVVEEMED--------EFSCIVCQE 462
Query: 331 RHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
A + C H+FC C + +R CP+C
Sbjct: 463 LFIRATTLTCSHSFCEYCLQSWLRKRNTCPIC 494
>gi|330795580|ref|XP_003285850.1| hypothetical protein DICPUDRAFT_149753 [Dictyostelium purpureum]
gi|325084155|gb|EGC37589.1| hypothetical protein DICPUDRAFT_149753 [Dictyostelium purpureum]
Length = 389
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 7/56 (12%)
Query: 320 GIEHN-CCVCMVR---HKGAAFIPCGHTFCRLCSRELWVQRGN--CPLCNGFILEI 369
+E+N CC+C ++ + C HTFC C R+ W + N CPLC F I
Sbjct: 244 SLENNECCICYIKLNTTNTSTIEVCSHTFCNECIRK-WCKLNNNTCPLCRKFFFFI 298
>gi|90075162|dbj|BAE87261.1| unnamed protein product [Macaca fascicularis]
gi|384950186|gb|AFI38698.1| E3 ubiquitin-protein ligase RNF8 isoform 1 [Macaca mulatta]
Length = 486
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 114/279 (40%), Gaps = 18/279 (6%)
Query: 95 SNPRSQLIR---RSSVRFQTNPAGELASQLEDNRGAPPQFARRPSSKVASSSPGP----T 147
SN +S++ + SS ++ GE+AS +N P A PS K + P
Sbjct: 170 SNLKSKINKVSCESSQSVKSQGKGEVASTPSENLD-PKLTALEPSKKTTGAPIYPGFPIV 228
Query: 148 QSSHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAV 207
HHE + RS + +++ R++ E ++ ++G + V
Sbjct: 229 TEVHHEQKASNSSASQRSLQMFKVTMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKIV 287
Query: 208 VLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMS 266
+ QE Q + A Q +A E + E + +E A+ E Q Q
Sbjct: 288 RMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQE 347
Query: 267 LMDLLEETDR-QMGLEGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHN 324
L+EE +R + E A ++ ++ +E++ + +A+ E +DV EN E
Sbjct: 348 HWALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLEN----ELQ 403
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
C +C A + C H+FC C E W++R CP+C
Sbjct: 404 CIICSEYFIEAVTLNCAHSFCSYCINE-WMKRKIECPIC 441
>gi|290463843|gb|ADD24831.1| ORF105 [Chlamys acute necrobiotic virus]
Length = 464
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 19/85 (22%)
Query: 308 EEEGDDVEENAGG--IEH-------------NCCVCMVRHKGAAFIPCGHTF-CRLCSRE 351
+E G+D EE+ GG IE +C C R AFIPCGH F C +C+ E
Sbjct: 372 DEGGEDKEEDGGGGVIEFPKNNKEVENPKRGSCKACYERKADIAFIPCGHVFSCNICTME 431
Query: 352 LWV---QRGNCPLCNGFILEILDIF 373
++ ++ CP+C + ++ IF
Sbjct: 432 MFASYKKKKRCPMCRVHVEKVQKIF 456
>gi|332255677|ref|XP_003276959.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 1 [Nomascus
leucogenys]
Length = 486
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 15/260 (5%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKVASS--SPG--PTQSSHHEDSPEGEGSPTRSSRQPQ 170
GE+AS +N P A PS K + PG HHE + RS + +
Sbjct: 193 GEVASTPSENLD-PKLTALEPSKKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFK 251
Query: 171 LSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAE 230
++ R++ E ++ ++G + V + QE Q + A Q +A
Sbjct: 252 VTMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKIVQMEQELQDLQSQLCAEQAQQQAR 310
Query: 231 AAAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMSLMDLLEETDR-QMGLEGSRYAVG 288
E + E + +E A+ E Q Q L+EE +R + E A
Sbjct: 311 VEQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKN 370
Query: 289 EDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRL 347
++ ++ +E++ + +A+ E +DV EN E C +C A + C H+FC
Sbjct: 371 KELEQTKEEKEKVQAQKEEVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSY 426
Query: 348 CSRELWVQRG-NCPLCNGFI 366
C E W++R CP+C I
Sbjct: 427 CINE-WMKRKIECPICRKHI 445
>gi|30584345|gb|AAP36421.1| Homo sapiens ring finger protein (C3HC4 type) 8 [synthetic
construct]
gi|60653067|gb|AAX29228.1| ring finger protein 8 [synthetic construct]
Length = 486
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 103/255 (40%), Gaps = 14/255 (5%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKV-ASSSPG--PTQSSHHEDSPEGEGSPTRSSRQPQL 171
GE+AS DN P A PS A PG HHE + RS + ++
Sbjct: 193 GEVASTPSDNLD-PKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFKV 251
Query: 172 SRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAEA 231
+ R++ E ++ ++G + V + QE Q + A Q +A
Sbjct: 252 TMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQARV 310
Query: 232 AAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMSLMDLLEETDR-QMGLEGSRYAVGE 289
E + E + +E A+ E Q Q L+EE +R + E A +
Sbjct: 311 EQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKNK 370
Query: 290 DEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLC 348
+ ++ +E++ + +A+ E +DV EN E C +C A + C H+FC C
Sbjct: 371 ELEQTKEEKEKMQAQKEEVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSYC 426
Query: 349 SRELWVQRG-NCPLC 362
E W++R CP+C
Sbjct: 427 INE-WMKRKIECPIC 440
>gi|62897089|dbj|BAD96485.1| ring finger protein 8 isoform 1 variant [Homo sapiens]
Length = 485
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 105/259 (40%), Gaps = 22/259 (8%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKV-ASSSPG--PTQSSHHEDSPEGEGSPTRSSRQPQL 171
GE+AS DN P A PS A PG +HHE + RS + ++
Sbjct: 193 GEVASTPSDNLD-PKLTALEPSKTTGAPIYPGFPKVTEAHHEQKASNSSASQRSLQMFKV 251
Query: 172 SRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQE-----RQLSAREAVAAQEA 226
+ R++ E ++ ++G + V + QE QL A +A
Sbjct: 252 TMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQARV 310
Query: 227 AEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLE--ETDRQMGLEGSR 284
+ E E E + Q E + + + Q Q +LM+ L + D + ++
Sbjct: 311 EQLEKTFQEEEQHLQGLEIAQGERDLKQ-QLAQALQEHWALMEELNRSKKDFEAIIQAKN 369
Query: 285 YAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTF 344
+ + ++E+E+ +A+ E E +DV EN E C +C A + C H+F
Sbjct: 370 KELEQTKEEKEKMQAQKE---EVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSF 422
Query: 345 CRLCSRELWVQRG-NCPLC 362
C C E W++R CP+C
Sbjct: 423 CSYCINE-WMKRKIECPIC 440
>gi|440896391|gb|ELR48324.1| E3 ubiquitin-protein ligase RNF8 [Bos grunniens mutus]
Length = 484
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 19/280 (6%)
Query: 95 SNPRSQLIRRS---SVRFQTNPAGELASQLEDNRGAPPQFARRPSSKV--ASSSPGPTQS 149
SN +S++ + S + +++ G++ASQ + P + PS K A +PGP +
Sbjct: 170 SNLKSKISKLSCEPGQQVKSHGKGKVASQPSEYLD-PKLTSFEPSVKTTGAHVNPGPAKV 228
Query: 150 SHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVARE---GTRRLA 206
+ +P+ S +L + +R+ T ++ V +V ++ G+ +
Sbjct: 229 IELLRKKKKASNPSASQSSLELFKVTMSRI-LMLKTQMQEKQVAVLNVKKQTKKGSSKKI 287
Query: 207 VVLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPR-QPRM 265
V + QE Q + A Q +A E + E + +E E + Q Q
Sbjct: 288 VKMEQELQDLQSQLCAEQAQQQARVEQLEKTIQEEQQHLEGLEKEEGEEDLKQQLAQALQ 347
Query: 266 SLMDLLEETDR-QMGLEGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEH 323
L+EE +R + E A ++ ++ +E++ + +A+ E +DV EN E
Sbjct: 348 EYRSLMEELNRSKKNFEAIIQAKDKELEQTKEEKEKVQAQKEEVLSHMNDVLEN----EL 403
Query: 324 NCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
C +C A + C H+FC C E W++R CP+C
Sbjct: 404 QCIICSEYFVEAVTLNCAHSFCSYCINE-WMKRKVECPIC 442
>gi|311260342|ref|XP_001927699.2| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Sus scrofa]
Length = 487
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 113/263 (42%), Gaps = 16/263 (6%)
Query: 109 FQTNPAGELASQLEDNRGAPPQFARRPSSKV--ASSSPGPTQSSHHEDSPEGEGSPTRSS 166
+++ G++A QL + P +PS K A P P + + + +P+ S
Sbjct: 187 VKSHEKGKVAGQLNEYLD-PKLTCLQPSGKALGAHVYPVPAKVVELQHRKQKASNPSASQ 245
Query: 167 RQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTR-RLAVVLAQERQLSAREAVAAQE 225
+L + +R+ T ++ + +V ++ + ++ E++L ++ E
Sbjct: 246 SSLELFKVTMSRI-LKLKTQMQEKQIAVLNVKKQTQKGNSKKIVKMEQELHDLQSQLCAE 304
Query: 226 AAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMD---LLEETDR-QMGLE 281
A+ +A + E + E E E E +Q +L + L+EE +R + E
Sbjct: 305 QAQQQARVEQLEKTFQEEQQHLQGLEKEQGEEDLKQQLAQALQEHRALMEELNRSRKDFE 364
Query: 282 GSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPC 340
A ++ ++ +E++ + +A+ E +DV EN E C +C A + C
Sbjct: 365 AIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLEN----ELQCIICSEYFIEAVTLNC 420
Query: 341 GHTFCRLCSRELWVQRG-NCPLC 362
H+FC C E W++R CP+C
Sbjct: 421 AHSFCSYCINE-WMKRKVECPIC 442
>gi|4504867|ref|NP_003949.1| E3 ubiquitin-protein ligase RNF8 isoform 1 [Homo sapiens]
gi|21362894|sp|O76064.1|RNF8_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF8; Short=hRNF8;
AltName: Full=RING finger protein 8
gi|33340636|gb|AAQ14887.1|AF334675_1 UBC13/UEV-interacting ring finger protein [Homo sapiens]
gi|3721580|dbj|BAA33557.1| new zinc finger protein [Homo sapiens]
gi|13960155|gb|AAH07517.1| Ring finger protein 8 [Homo sapiens]
gi|30583731|gb|AAP36114.1| ring finger protein (C3HC4 type) 8 [Homo sapiens]
gi|60656117|gb|AAX32622.1| ring finger protein 8 [synthetic construct]
gi|60656119|gb|AAX32623.1| ring finger protein 8 [synthetic construct]
gi|119624349|gb|EAX03944.1| ring finger protein 8, isoform CRA_b [Homo sapiens]
gi|123979668|gb|ABM81663.1| ring finger protein 8 [synthetic construct]
gi|123994467|gb|ABM84835.1| ring finger protein 8 [synthetic construct]
gi|168267474|dbj|BAG09793.1| E3 ubiquitin-protein ligase RNF8 [synthetic construct]
Length = 485
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKV-ASSSPG--PTQSSHHEDSPEGEGSPTRSSRQPQL 171
GE+AS DN P A PS A PG HHE + RS + ++
Sbjct: 193 GEVASTPSDNLD-PKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFKV 251
Query: 172 SRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQE-----RQLSAREAVAAQEA 226
+ R++ E ++ ++G + V + QE QL A +A
Sbjct: 252 TMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQARV 310
Query: 227 AEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLE--ETDRQMGLEGSR 284
+ E E E + Q E + + + Q Q +LM+ L + D + ++
Sbjct: 311 EQLEKTFQEEEQHLQGLEIAQGEKDLKQ-QLAQALQEHWALMEELNRSKKDFEAIIQAKN 369
Query: 285 YAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTF 344
+ + ++E+E+ +A+ E E +DV EN E C +C A + C H+F
Sbjct: 370 KELEQTKEEKEKMQAQKE---EVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSF 422
Query: 345 CRLCSRELWVQRG-NCPLC 362
C C E W++R CP+C
Sbjct: 423 CSYCINE-WMKRKIECPIC 440
>gi|119624348|gb|EAX03943.1| ring finger protein 8, isoform CRA_a [Homo sapiens]
Length = 485
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKV-ASSSPG--PTQSSHHEDSPEGEGSPTRSSRQPQL 171
GE+AS DN P A PS A PG HHE + RS + ++
Sbjct: 193 GEVASTPSDNLD-PKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFKV 251
Query: 172 SRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQE-----RQLSAREAVAAQEA 226
+ R++ E ++ ++G + V + QE QL A +A
Sbjct: 252 TMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQARV 310
Query: 227 AEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLE--ETDRQMGLEGSR 284
+ E E E + Q E + + + Q Q +LM+ L + D + ++
Sbjct: 311 EQLEKTFQEEEQHLQGLEIAQGEKDLKQ-QLAQALQEHWALMEELNRSKKDFEAIIQAKN 369
Query: 285 YAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTF 344
+ + ++E+E+ +A+ E E +DV EN E C +C A + C H+F
Sbjct: 370 KELEQTKEEKEKMQAQKE---EVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSF 422
Query: 345 CRLCSRELWVQRG-NCPLC 362
C C E W++R CP+C
Sbjct: 423 CSYCINE-WMKRKIECPIC 440
>gi|40788314|dbj|BAA31621.2| KIAA0646 protein [Homo sapiens]
Length = 486
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 104/259 (40%), Gaps = 22/259 (8%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKV-ASSSPG--PTQSSHHEDSPEGEGSPTRSSRQPQL 171
GE+AS DN P A PS A PG HHE + RS + ++
Sbjct: 194 GEVASTPSDNLD-PKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFKV 252
Query: 172 SRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQE-----RQLSAREAVAAQEA 226
+ R++ E ++ ++G + V + QE QL A +A
Sbjct: 253 TMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQARV 311
Query: 227 AEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLE--ETDRQMGLEGSR 284
+ E E E + Q E + + + Q Q +LM+ L + D + ++
Sbjct: 312 EQLEKTFQEEEQHLQGLEIAQGEKDLKQ-QLAQALQEHWALMEELNRSKKDFEAIIQAKN 370
Query: 285 YAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTF 344
+ + ++E+E+ +A+ E E +DV EN E C +C A + C H+F
Sbjct: 371 KELEQTKEEKEKMQAQKE---EVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSF 423
Query: 345 CRLCSRELWVQRG-NCPLC 362
C C E W++R CP+C
Sbjct: 424 CSYCINE-WMKRKIECPIC 441
>gi|114051113|ref|NP_001039681.1| E3 ubiquitin-protein ligase RNF8 [Bos taurus]
gi|119366657|sp|Q2HJ46.1|RNF8_BOVIN RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING
finger protein 8
gi|87578372|gb|AAI13318.1| Ring finger protein 8 [Bos taurus]
gi|296474510|tpg|DAA16625.1| TPA: E3 ubiquitin-protein ligase RNF8 [Bos taurus]
Length = 487
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 120/280 (42%), Gaps = 19/280 (6%)
Query: 95 SNPRSQLIRRS---SVRFQTNPAGELASQLEDNRGAPPQFARRPSSKV--ASSSPGPTQS 149
SN +S++ + S + +++ G++ASQ + P + PS K A +PGP +
Sbjct: 170 SNLKSKISKLSCEPGQQVKSHGKGKVASQPSEYLD-PKLTSFEPSVKTTGAHVNPGPAKV 228
Query: 150 SHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVARE---GTRRLA 206
+ +P+ S +L + +R+ T ++ V +V ++ G+ +
Sbjct: 229 IELLRKKKKASNPSASQSSLELFKVTMSRI-LMLKTQMQEKQVAVLNVKKQTKKGSSKKI 287
Query: 207 VVLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPR-QPRM 265
V + QE Q + A Q +A E + E + +E E + Q Q
Sbjct: 288 VKMEQELQDLQSQLCAEQAQQQARVEQLEKTIQEEQQHLEGLEKEEGEEDLKQQLAQALQ 347
Query: 266 SLMDLLEETDR-QMGLEGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEH 323
L+EE +R + E A ++ ++ +E++ + +A+ E +DV EN E
Sbjct: 348 EYRSLVEELNRSKKNFEAIIQAKDKELEQTKEEKEKVQAQKEEVLSHMNDVLEN----EL 403
Query: 324 NCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
C +C A + C H+FC C E W++R CP+C
Sbjct: 404 QCIICSEYFVEAVTLNCAHSFCSYCINE-WMKRKVECPIC 442
>gi|194390908|dbj|BAG60572.1| unnamed protein product [Homo sapiens]
Length = 417
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 103/255 (40%), Gaps = 14/255 (5%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKV-ASSSPG--PTQSSHHEDSPEGEGSPTRSSRQPQL 171
GE+AS DN P A PS A PG HHE + RS + ++
Sbjct: 125 GEVASTPSDNLD-PKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFKV 183
Query: 172 SRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAEA 231
+ R++ E ++ ++G + V + QE Q + A Q +A
Sbjct: 184 TMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQARV 242
Query: 232 AAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMSLMDLLEETDR-QMGLEGSRYAVGE 289
E + E + +E A+ E Q Q L+EE +R + E A +
Sbjct: 243 EQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKNK 302
Query: 290 DEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLC 348
+ ++ +E++ + +A+ E +DV EN E C +C A + C H+FC C
Sbjct: 303 ELEQTKEEKEKMQAQKEEVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSYC 358
Query: 349 SRELWVQRG-NCPLC 362
E W++R CP+C
Sbjct: 359 INE-WMKRKIECPIC 372
>gi|426353001|ref|XP_004043990.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 1 [Gorilla
gorilla gorilla]
Length = 486
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 15/256 (5%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKVASS--SPG--PTQSSHHEDSPEGEGSPTRSSRQPQ 170
GE+AS +N P A PS K + PG HHE + RS + +
Sbjct: 193 GEVASTPSENLD-PKLTALEPSKKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFK 251
Query: 171 LSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAE 230
++ R++ E ++ ++G + V + QE Q + A Q +A
Sbjct: 252 VTMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQAR 310
Query: 231 AAAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMSLMDLLEETDR-QMGLEGSRYAVG 288
E + E + +E A+ E Q Q L+EE +R + E A
Sbjct: 311 VEQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKN 370
Query: 289 EDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRL 347
++ ++ +E++ + +A+ E +DV EN E C +C A + C H+FC
Sbjct: 371 KELEQTKEEKEKVQAQKEEVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSY 426
Query: 348 CSRELWVQRG-NCPLC 362
C E W++R CP+C
Sbjct: 427 CINE-WMKRKIECPIC 441
>gi|397496211|ref|XP_003818935.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 1 [Pan
paniscus]
gi|343961665|dbj|BAK62422.1| ubiquitin ligase protein RNF8 [Pan troglodytes]
gi|410221114|gb|JAA07776.1| ring finger protein 8 [Pan troglodytes]
gi|410258382|gb|JAA17158.1| ring finger protein 8 [Pan troglodytes]
gi|410306572|gb|JAA31886.1| ring finger protein 8 [Pan troglodytes]
gi|410341001|gb|JAA39447.1| ring finger protein 8 [Pan troglodytes]
Length = 485
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 103/255 (40%), Gaps = 14/255 (5%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKV-ASSSPG--PTQSSHHEDSPEGEGSPTRSSRQPQL 171
GE+AS DN P A PS A PG HHE + RS + ++
Sbjct: 193 GEVASTPSDNLD-PKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFKV 251
Query: 172 SRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAEA 231
+ R++ E ++ ++G + V + QE Q + A Q +A
Sbjct: 252 TMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQARV 310
Query: 232 AAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMSLMDLLEETDR-QMGLEGSRYAVGE 289
E + E + +E A+ E Q Q L+EE +R + E A +
Sbjct: 311 EQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKNK 370
Query: 290 DEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLC 348
+ ++ +E++ + +A+ E +DV EN E C +C A + C H+FC C
Sbjct: 371 ELEQTKEEKEKVQAQKEEVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSYC 426
Query: 349 SRELWVQRG-NCPLC 362
E W++R CP+C
Sbjct: 427 INE-WMKRKIECPIC 440
>gi|332823944|ref|XP_003311319.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Pan troglodytes]
Length = 417
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 103/255 (40%), Gaps = 14/255 (5%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKV-ASSSPG--PTQSSHHEDSPEGEGSPTRSSRQPQL 171
GE+AS DN P A PS A PG HHE + RS + ++
Sbjct: 125 GEVASTPSDNLD-PKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFKV 183
Query: 172 SRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAEA 231
+ R++ E ++ ++G + V + QE Q + A Q +A
Sbjct: 184 TMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQARV 242
Query: 232 AAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMSLMDLLEETDR-QMGLEGSRYAVGE 289
E + E + +E A+ E Q Q L+EE +R + E A +
Sbjct: 243 EQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKNK 302
Query: 290 DEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLC 348
+ ++ +E++ + +A+ E +DV EN E C +C A + C H+FC C
Sbjct: 303 ELEQTKEEKEKVQAQKEEVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSYC 358
Query: 349 SRELWVQRG-NCPLC 362
E W++R CP+C
Sbjct: 359 INE-WMKRKIECPIC 372
>gi|426353005|ref|XP_004043992.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 3 [Gorilla
gorilla gorilla]
Length = 418
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 104/256 (40%), Gaps = 15/256 (5%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKVASS--SPG--PTQSSHHEDSPEGEGSPTRSSRQPQ 170
GE+AS +N P A PS K + PG HHE + RS + +
Sbjct: 125 GEVASTPSENLD-PKLTALEPSKKTTGAPIYPGFPKVTEVHHEQKASNSSASQRSLQMFK 183
Query: 171 LSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAE 230
++ R++ E ++ ++G + V + QE Q + A Q +A
Sbjct: 184 VTMSRILRLKIQMQEKHEA-VMNVKKQTQKGNSKKVVQMEQELQDLQSQLCAEQAQQQAR 242
Query: 231 AAAAEAEAEAEAEASVQVE-AEAEAAEPVQPRQPRMSLMDLLEETDR-QMGLEGSRYAVG 288
E + E + +E A+ E Q Q L+EE +R + E A
Sbjct: 243 VEQLEKTFQEEEQHLQGLEIAQGEEDLKQQLAQALQEHWALMEELNRSKKDFEAIIQAKN 302
Query: 289 EDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRL 347
++ ++ +E++ + +A+ E +DV EN E C +C A + C H+FC
Sbjct: 303 KELEQTKEEKEKVQAQKEEVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSY 358
Query: 348 CSRELWVQRG-NCPLC 362
C E W++R CP+C
Sbjct: 359 CINE-WMKRKIECPIC 373
>gi|358059051|dbj|GAA95181.1| hypothetical protein E5Q_01836 [Mixia osmundae IAM 14324]
Length = 877
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 4/88 (4%)
Query: 278 MGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAG---GIEHNCCVCMVRHKG 334
+G E R + + +++ AE A G E+E + + E G E C VC +
Sbjct: 509 LGEEAKRTHKSQHKSQKKRRNAELSAVG-LEQELEALPETLGEEIASELECQVCFNTYYE 567
Query: 335 AAFIPCGHTFCRLCSRELWVQRGNCPLC 362
CGHTFCR C CPLC
Sbjct: 568 PITTHCGHTFCRACLMRSLDHSDKCPLC 595
>gi|145638188|ref|ZP_01793798.1| immunoglobin A1 protease [Haemophilus influenzae PittII]
gi|145272517|gb|EDK12424.1| immunoglobin A1 protease [Haemophilus influenzae PittII]
gi|309751344|gb|ADO81328.1| Immunoglobulin A1 protease [Haemophilus influenzae R2866]
Length = 1781
Score = 43.1 bits (100), Expect = 0.23, Method: Composition-based stats.
Identities = 53/252 (21%), Positives = 101/252 (40%), Gaps = 24/252 (9%)
Query: 86 PIPSSSLSNSNPRSQLIRRSSVRFQTNPAGELASQLEDNRGAPPQFARRPSSKVASSSPG 145
P S ++S + P + + + + + + E+ + AP ++ P K A +P
Sbjct: 1147 PTESITVSENQPEKTVSQSTEDKVVVEKEEKAKVETEETQKAPQVTSKEPP-KQAEPAPE 1205
Query: 146 --PTQSSHHEDSPEGEGSPT----------RSSRQPQLSRHNSTRVEAASNTVSEDNSVD 193
PT ++ E + PT S + T + + VSE+
Sbjct: 1206 EVPTDTNAEEAQALQQTQPTTVTAAETTSPNSKPAEETQSSEGTNAKPVTPVVSENKVSQ 1265
Query: 194 PFDVAREGTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAE 253
P + E T ++ AQE A +A QE ++E +AE E+E +V+ E +
Sbjct: 1266 PTET--EKTAKVESKEAQETPKVASQASPKQE--QSETVQPQAELESEKVPTVKNAEEVQ 1321
Query: 254 AAEPVQP------RQPRMSLMDLLEETDRQMGLE-GSRYAVGEDEDEEEEDEAEAEAEGE 306
A QP QP +E+ +++ GS A+ E ++ ++ + E E +
Sbjct: 1322 AQPQTQPSAIVSTEQPAKETSSNVEQPEQESSTNTGSATAMTETAEKSDKPQMETVTEND 1381
Query: 307 YEEEGDDVEENA 318
+ E + V +N+
Sbjct: 1382 RQPEANTVADNS 1393
>gi|355689334|gb|AER98799.1| FtsJ methyltransferase domain containing 2 [Mustela putorius furo]
Length = 962
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 18/263 (6%)
Query: 110 QTNPAGELASQLEDNRGAPPQFARRPSSKV--ASSSPGPTQSSHHEDSPEGEGSPTRSSR 167
+++ GE+ASQ + P + PS K A PG + + +P+ S
Sbjct: 188 KSHGKGEVASQPAEYLD-PKLTSVEPSEKTTEAHVYPGSAKVIELHHKKQKASNPSVSQS 246
Query: 168 QPQLSRHNSTRVEAASNTVSEDNSVDPFDVARE---GTRRLAVVLAQERQLSAREAVAAQ 224
+L + +R+ T ++ V V ++ G + V + QE Q + A Q
Sbjct: 247 SLELFKVTMSRI-LKLKTQMQEKQVAVLKVKKQTQKGNSKKIVKMEQELQDLQSQLCAEQ 305
Query: 225 EAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMD---LLEETDR-QMGL 280
A+ +A + E + E E E E +Q +L + L+EE +R +
Sbjct: 306 --AQQQARVEQLEKTFQEEEQHLQGLEKEQGEEDLKQQLAQALQEHRALMEELNRSKKDF 363
Query: 281 EGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIP 339
E A ++ ++ +E++ + +A+ E +DV EN E C +C A +
Sbjct: 364 EAIIQAKNKELEQTKEEKEKVQAQKEEVLSHVNDVLEN----ELQCIICSEYFIEAVTLN 419
Query: 340 CGHTFCRLCSRELWVQRGNCPLC 362
C H+FC C E ++ CP+C
Sbjct: 420 CAHSFCSYCINEWMKRKVECPIC 442
>gi|254578280|ref|XP_002495126.1| ZYRO0B03938p [Zygosaccharomyces rouxii]
gi|238938016|emb|CAR26193.1| ZYRO0B03938p [Zygosaccharomyces rouxii]
Length = 183
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 14/110 (12%)
Query: 265 MSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEE------NA 318
+ LM +L E D + EGSR E D E DEA + + E ++ E N
Sbjct: 54 VDLMRVLNEVDDETQEEGSRGKTTETIDLE--DEAAEQQVKDVPREENEQENPPKPPANK 111
Query: 319 GGIEHNCCVCMVRHKGAAFIPCGHTFCRLC------SRELWVQRGNCPLC 362
E++C +C A PCGH FC C S + GNC LC
Sbjct: 112 AVREYHCPICFEPPDTAVMTPCGHIFCVACLFQMVNSSRTHRKSGNCALC 161
>gi|444725540|gb|ELW66104.1| E3 ubiquitin-protein ligase RNF8 [Tupaia chinensis]
Length = 587
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 17/164 (10%)
Query: 208 VLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEP------VQPR 261
++ E++L ++ E A+ +A + E E E +E E E Q
Sbjct: 280 IVKMEQELQDLQSQLCAEQAQQQARVEQLEKTFEEEQQHLQGSEKEQGEEDLKQQLAQAL 339
Query: 262 QPRMSLMDLLE--ETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAG 319
Q +LMD L + D + ++ + + ++E+E+ +A+ E E +DV EN
Sbjct: 340 QEHRALMDELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKE---EVLSHMNDVLEN-- 394
Query: 320 GIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
E C +C A + C H+FC C E W++R CP+C
Sbjct: 395 --ELQCIICSEYFIEAVTLNCAHSFCSYCINE-WMKRKVECPIC 435
>gi|440803952|gb|ELR24835.1| 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 656
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 325 CCVCMVRHKGAAFIPCGHT-FCRLCSRELWVQRGNCPLCNGFILEILDIF 373
C VC K A PCGH C+ C + +RG CP+C I+ ++ +F
Sbjct: 605 CIVCFDAAKDALLYPCGHVALCQPCGNRIKEERGGCPICRAPIVGVVKMF 654
>gi|50510567|dbj|BAD32269.1| mKIAA0646 protein [Mus musculus]
Length = 749
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 72/163 (44%), Gaps = 15/163 (9%)
Query: 208 VLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEP------VQPR 261
++ E++L ++ E A+ +A + E + EA E E E VQ
Sbjct: 318 IVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQEEAHYLQGLEKEQGECDLKQQLVQAL 377
Query: 262 QPRMSLMDLLE--ETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAG 319
Q +LM+ L + D + ++ + ++ +EE+D+ +A+ E E +D+ EN
Sbjct: 378 QEHQALMEELNCSKKDFEKIIQAKNKEL--EQTKEEKDKVQAQKE-EVLSHMNDLLEN-- 432
Query: 320 GIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
E C +C A + C H+FC C E ++ CP+C
Sbjct: 433 --ELQCIICSEYFIEAVTLNCAHSFCSFCINEWMKRKVECPIC 473
>gi|440302973|gb|ELP95279.1| RING finger protein, putative [Entamoeba invadens IP1]
Length = 267
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 308 EEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFIL 367
E +GD E+N E C +CM + A CGH FC C RE ++ CP+C +
Sbjct: 104 ESKGD--EKNDHSFE--CMICMDTAQNAVVTQCGHMFCWECLREWLDRQQTCPICKSRVT 159
Query: 368 E 368
E
Sbjct: 160 E 160
>gi|82705370|ref|XP_726942.1| processed variable antigen [Plasmodium yoelii yoelii 17XNL]
gi|23482557|gb|EAA18507.1| processed variable antigen-related [Plasmodium yoelii yoelii]
Length = 623
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 272 EETDRQMGLEGSRYAVGE---DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHN---- 324
++ D+ + L ++ + E ED +E DE+ + + E D+ EHN
Sbjct: 102 KKIDKSLELNKNKVSNSELNIFEDAKEYDESNKDEFEKKENTNDNNNILNKNSEHNEKQI 161
Query: 325 -----CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFI 366
C +CM IPCGH FCR C + CPLC ++
Sbjct: 162 SSDLECVICMKLLIMPVTIPCGHNFCRDCLEKAKEYNDTCPLCRSYM 208
>gi|410916747|ref|XP_003971848.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Takifugu
rubripes]
Length = 527
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 18/165 (10%)
Query: 213 RQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLE 272
R++ RE A E ++ EA + ++ Q+EA+ E + + L D L+
Sbjct: 264 REVQVRELQAQLETLRSKMHQMEALERSFSQTQQQLEAQKTQQEE---KLMKKKLQDALQ 320
Query: 273 ETDRQMG-LEGSRYAVGE---------DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIE 322
E + + L SR A E + +EE+++A A+ E E + +V EN E
Sbjct: 321 EQKKVIDELALSRQAYEEILFAKNKELEVTKEEKEKACAQKE-EVVTQVTEVLEN----E 375
Query: 323 HNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFIL 367
C +C A + C H+FC C ++ ++ CP+C IL
Sbjct: 376 LQCIICSELFIEAVILNCAHSFCCYCIKQWRKKKDECPICRQAIL 420
>gi|23956112|ref|NP_067394.1| E3 ubiquitin-protein ligase RNF8 [Mus musculus]
gi|21362895|sp|Q8VC56.1|RNF8_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName:
Full=ActA-interacting protein 37; Short=AIP37; AltName:
Full=LaXp180; AltName: Full=RING finger protein 8
gi|18255721|gb|AAH21778.1| Ring finger protein 8 [Mus musculus]
gi|26345172|dbj|BAC36236.1| unnamed protein product [Mus musculus]
gi|71059919|emb|CAJ18503.1| Rnf8 [Mus musculus]
gi|74151225|dbj|BAE27732.1| unnamed protein product [Mus musculus]
Length = 488
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 184 NTVSEDNSVDPFDVAREGTRRLAV--VLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAE 241
T ++ + +V R+ TR+ + ++ E++L ++ E A+ +A + E +
Sbjct: 263 KTQMQEKQIAVLNVKRQ-TRKGSSKKIVRMEKELRNLQSQLYAEQAQQQARVEQLEKTFQ 321
Query: 242 AEASVQVEAEAEAAEP------VQPRQPRMSLMDLLE--ETDRQMGLEGSRYAVGEDEDE 293
EA E E E VQ Q +LM+ L + D + ++ + ++ +
Sbjct: 322 EEAHYLQGLEKEQGECDLKQQLVQALQEHQALMEELNCSKKDFEKIIQAKNKEL--EQTK 379
Query: 294 EEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELW 353
EE+D+ +A+ E E +D+ EN E C +C A + C H+FC C E W
Sbjct: 380 EEKDKVQAQKE-EVLSHMNDLLEN----ELQCIICSEYFIEAVTLNCAHSFCSFCINE-W 433
Query: 354 VQRG-NCPLC 362
++R CP+C
Sbjct: 434 MKRKVECPIC 443
>gi|403357159|gb|EJY78198.1| zinc binding protein, putative [Oxytricha trifallax]
Length = 894
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 316 ENAGGIEH-NCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
+N IE C +C+ G CGHTFC C E +++ CP C
Sbjct: 231 DNTKAIEEVQCSICIDMIIGCRVAICGHTFCNQCLTECLIRKKICPQC 278
>gi|326499255|dbj|BAK06118.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 378
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 293 EEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRL-CSRE 351
E +E EA+ E + E G D E G C +C+ + + AAF+PCGH C C++
Sbjct: 294 EAQERFHEADNEDDAGENGSDDEPGEMGDGQLCVICLRKRRRAAFVPCGHLVCCCNCAKR 353
Query: 352 L-WVQRGNCPLCNGFILEILDIF 373
+ + CP+C I +L ++
Sbjct: 354 VELLDEPLCPVCRQDIQYMLRVY 376
>gi|403334062|gb|EJY66177.1| zinc binding protein, putative [Oxytricha trifallax]
Length = 988
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 316 ENAGGIEH-NCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
+N IE C +C+ G CGHTFC C E +++ CP C
Sbjct: 325 DNTKAIEEVQCSICIDMIIGCRVAICGHTFCNQCLTECLIRKKICPQC 372
>gi|340369190|ref|XP_003383131.1| PREDICTED: e3 ubiquitin-protein ligase RNF146-like [Amphimedon
queenslandica]
Length = 226
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 314 VEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
++E+ + C +C + + +PCGHTFC LC + ++ ++ C LC
Sbjct: 49 IKEDIVPFDMKCPICQDKSRHPLTLPCGHTFCYLCIKGVYARQKVCALC 97
>gi|71043656|ref|NP_001020898.1| E3 ubiquitin-protein ligase RNF8 [Rattus norvegicus]
gi|123782072|sp|Q4KLN8.1|RNF8_RAT RecName: Full=E3 ubiquitin-protein ligase RNF8; AltName: Full=RING
finger protein 8
gi|68534363|gb|AAH99079.1| Ring finger protein 8 [Rattus norvegicus]
Length = 487
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 21/217 (9%)
Query: 161 SPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDV---AREGTRRLAVVLAQE----- 212
SP+ S +L + +R+ T ++ + +V AR+G+ + V + +E
Sbjct: 240 SPSASQSSLELFKMTMSRM-LKLKTQMQEKQIAVLNVKRQARKGSSKKVVRMEKELRDLQ 298
Query: 213 RQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLE 272
QL A +A + E E E + Q E + + ++ R L+E
Sbjct: 299 SQLYAEQAQQQARVEQLEKTFQEEEQHLQGLEKEQGECDLKQQLLQALQEHRA----LME 354
Query: 273 ETDR-QMGLEGSRYAVGEDED--EEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCM 329
E DR + E A ++ + +EE+D+ +A+ E E +DV EN E C +C
Sbjct: 355 ELDRSKKDFEKIIQAKNKELERTKEEKDKVQAQKE-EVLSHMNDVLEN----ELQCIICS 409
Query: 330 VRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFI 366
A + C H+FC C E ++ CP+C I
Sbjct: 410 EYFIEAVTLNCAHSFCSFCISEWMKRKVECPICRKDI 446
>gi|302841583|ref|XP_002952336.1| hypothetical protein VOLCADRAFT_92990 [Volvox carteri f.
nagariensis]
gi|300262272|gb|EFJ46479.1| hypothetical protein VOLCADRAFT_92990 [Volvox carteri f.
nagariensis]
Length = 889
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 68/156 (43%), Gaps = 22/156 (14%)
Query: 226 AAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLEETDRQMGLEGSRY 285
A+ E+A E A ++A A++Q + EA RQ + + L EE D++ E S+
Sbjct: 741 ASRLESAGLEVRARSDAMAALQQQLEAAG------RQLDLKRLAL-EEADQKHVKEKSKR 793
Query: 286 AVGEDEDEEEEDEAE--------AEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAF 337
E+E + + + E A A E +EE D + + NC VC R K
Sbjct: 794 QRVEEEVKALQTKVEKLKKLQSPAGAARELQEEADAMRQLL-----NCNVCHERQKNRII 848
Query: 338 IPCGHTFCRLC-SRELWVQRGNCPLCNGFILEILDI 372
C H FC +C R L + CP C G + DI
Sbjct: 849 TKCCHVFCDVCIDRTLTARNRKCPGC-GIVFAKGDI 883
>gi|330793260|ref|XP_003284703.1| hypothetical protein DICPUDRAFT_75655 [Dictyostelium purpureum]
gi|325085401|gb|EGC38809.1| hypothetical protein DICPUDRAFT_75655 [Dictyostelium purpureum]
Length = 334
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 325 CCVCMVR--HKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEI 369
CC+C + + I C H FC C + + CPLC L I
Sbjct: 207 CCICYTKLNSNNSTSIDCAHKFCYGCITKWYTIEDTCPLCRKVFLYI 253
>gi|410959046|ref|XP_003986123.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF8
[Felis catus]
Length = 481
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 74/161 (45%), Gaps = 11/161 (6%)
Query: 208 VLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSL 267
++ E++L ++ E A+ +A + E + E + E E E +Q +L
Sbjct: 281 IVKMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQDLEKEQGEEDLKQQLAQAL 340
Query: 268 MD---LLEETDR-QMGLEGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIE 322
+ L+EE +R + E A ++ ++ +E++ + +A+ E +DV EN E
Sbjct: 341 QEHRALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHVNDVLEN----E 396
Query: 323 HNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
C +C A + C H+FC C E W++R CP+C
Sbjct: 397 LQCIICSEYFIEAVTLNCAHSFCSYCISE-WMKRKVECPIC 436
>gi|48696820|ref|YP_024644.1| ORF106 [Ostreid herpesvirus 1]
gi|75544537|sp|Q6R7C4.1|IAP4_OSHVF RecName: Full=Putative apoptosis inhibitor ORF106
gi|41352484|gb|AAS00991.1| ORF106 [Ostreid herpesvirus 1]
Length = 465
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 325 CCVCMVRHKGAAFIPCGHTF-CRLCSRELWV---QRGNCPLCNGFILEILDIF 373
C C R AFIPCGH F C +C+ E++ ++ CP+C + ++ IF
Sbjct: 405 CKACYERKADIAFIPCGHVFSCNICTMEMFASYKKKKRCPMCRVHVEKVQKIF 457
>gi|281344018|gb|EFB19602.1| hypothetical protein PANDA_014569 [Ailuropoda melanoleuca]
Length = 482
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 17/232 (7%)
Query: 140 ASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAR 199
A PG + + +PT +L + +R+ T ++ VD V +
Sbjct: 219 ARVHPGFAKVIELHHKKQKASNPTACQSSLELFKVTMSRI-LKLKTQMQEKQVDVLKVKK 277
Query: 200 E---GTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAE 256
+ G + V + QE Q + A Q A+ +A + E + E E E E
Sbjct: 278 QTQKGNSKKIVKMEQELQDLQSQLCAEQ--AQQQARVEQLEKTFQEEEQHLQGWEKEQGE 335
Query: 257 PVQPRQPRMSLMD---LLEETDR-QMGLEGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEG 311
+Q +L + L EE +R + E A ++ ++ +E++ + +A+ E
Sbjct: 336 EDLKQQLAQALQEHQALTEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHM 395
Query: 312 DDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
+DV EN E C +C A + C H+FC C E W++R CP+C
Sbjct: 396 NDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSYCINE-WMKRKVECPIC 442
>gi|392593557|gb|EIW82882.1| hypothetical protein CONPUDRAFT_136103 [Coniophora puteana
RWD-64-598 SS2]
Length = 803
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 304 EGEYEEEG-DDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLC-SRELWVQRGNCPL 361
+G +E G DVE+ I NC C +R + A C HTFC+ C + ++ CP
Sbjct: 730 KGREKERGMSDVEKAMKII--NCSNCKLRPREVALTKCMHTFCKECVDARISTRQRRCPH 787
Query: 362 CN-GF 365
CN GF
Sbjct: 788 CNLGF 792
>gi|301779427|ref|XP_002925129.1| PREDICTED: e3 ubiquitin-protein ligase RNF8-like [Ailuropoda
melanoleuca]
Length = 487
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 17/232 (7%)
Query: 140 ASSSPGPTQSSHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAR 199
A PG + + +PT +L + +R+ T ++ VD V +
Sbjct: 219 ARVHPGFAKVIELHHKKQKASNPTACQSSLELFKVTMSRI-LKLKTQMQEKQVDVLKVKK 277
Query: 200 E---GTRRLAVVLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAE 256
+ G + V + QE Q + A Q A+ +A + E + E E E E
Sbjct: 278 QTQKGNSKKIVKMEQELQDLQSQLCAEQ--AQQQARVEQLEKTFQEEEQHLQGWEKEQGE 335
Query: 257 PVQPRQPRMSLMD---LLEETDR-QMGLEGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEG 311
+Q +L + L EE +R + E A ++ ++ +E++ + +A+ E
Sbjct: 336 EDLKQQLAQALQEHQALTEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHM 395
Query: 312 DDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG-NCPLC 362
+DV EN E C +C A + C H+FC C E W++R CP+C
Sbjct: 396 NDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSYCINE-WMKRKVECPIC 442
>gi|154332796|ref|XP_001562660.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059663|emb|CAM41783.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 460
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Query: 314 VEENAGGIEHNCCVCMVRHKGAAFIPCGH-TFCRLCSRELWVQRGNCPLCNGFILEILD 371
V + G + NC VCM +PC H CRLC+ NCP+C I E+ +
Sbjct: 402 VRDEIQGKQENCIVCMDHAPTVILLPCKHKVMCRLCAPSC----PNCPVCRSGISEMFE 456
>gi|358056200|dbj|GAA97940.1| hypothetical protein E5Q_04620 [Mixia osmundae IAM 14324]
Length = 439
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 292 DEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRE 351
D + +++AE E + EE+ D E++ C +C+ + A CGHTFC C
Sbjct: 356 DPDADNQAEKAEEAQTEEDADAEPEDSHA--RRCTLCLGPRRDPASTECGHTFCWECIVG 413
Query: 352 LWVQRGNCPLC 362
++ CPLC
Sbjct: 414 WAREKPECPLC 424
>gi|21686751|ref|NP_663251.1| inhibitor of apoptosis 1 [Phthorimaea operculella granulovirus]
gi|21637067|gb|AAM70284.1| inhibitor of apoptosis 1 [Phthorimaea operculella granulovirus]
Length = 245
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Query: 308 EEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGH-TFCRLCSRELWVQRGN--CPLCNG 364
E+E +D EEN + C +C+ + +PC H C C++++ + R N CPLC
Sbjct: 176 EQEKNDNEENCSSNDLMCVICLENRRNMCLVPCKHFVLCTKCAQKI-MYRPNRKCPLCRV 234
Query: 365 FILEILDIF 373
F L I+
Sbjct: 235 FFTHALQIY 243
>gi|345315312|ref|XP_001511244.2| PREDICTED: E3 ubiquitin-protein ligase RNF8-like, partial
[Ornithorhynchus anatinus]
Length = 567
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 5/77 (6%)
Query: 290 DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCS 349
++ +EE++ +A+ E E DV EN E C +C A + C H+FC C
Sbjct: 379 EQTKEEKEMVQAQKE-EALNHFSDVLEN----ELQCTICSDYFIEAVTLNCAHSFCSFCI 433
Query: 350 RELWVQRGNCPLCNGFI 366
E ++ CP+C I
Sbjct: 434 SEWMKRKEECPICRQLI 450
>gi|344264359|ref|XP_003404260.1| PREDICTED: E3 ubiquitin-protein ligase RNF8-like [Loxodonta
africana]
Length = 623
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 120/282 (42%), Gaps = 21/282 (7%)
Query: 93 SNSNPR-SQLIRRSSVRFQTNPAGELASQLEDNRGAPPQFARRPSSKVASSSPGPT---- 147
SNS P+ S++ ++ GE+ASQ + P + PS K + PT
Sbjct: 170 SNSKPKISKVFCEPGQPVKSRGKGEVASQRSEYLD-PKLTSVEPSEKTTEAHIYPTPPKV 228
Query: 148 QSSHHEDSPEGEGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLA- 206
HH+ ++SS + L + +R+ T ++ + +V ++ + +
Sbjct: 229 VELHHKKQKASNCPASQSSLE--LFKVTMSRI-LKLKTQMQEKQIAVLNVKKQNQKENSE 285
Query: 207 VVLAQERQLSAREAVAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMS 266
++ E++L ++ E A+ +A + E + E E E E +Q +
Sbjct: 286 NIVKMEQELQDLQSQLCAEQAQQQARVEQLEKTFQEEEQHLQGLEKEQGEEDLKQQLAQA 345
Query: 267 LMD---LLEETDR-QMGLEGSRYAVGED--EDEEEEDEAEAEAEGEYEEEGDDVEENAGG 320
L + L+EE +R + E A ++ + +EE+++ +A+ E E +DV EN
Sbjct: 346 LQEHRSLMEELNRSRRNFEAIIQAKNKELEQTKEEKEKVQAQKE-EVLNHMNDVLEN--- 401
Query: 321 IEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
E C +C A + C H+FC C E ++ CP+C
Sbjct: 402 -ELQCIICSEYFIEAVTLNCAHSFCSYCISEWMKRKIECPIC 442
>gi|395534068|ref|XP_003769070.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Sarcophilus harrisii]
Length = 607
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 290 DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCS 349
++ +EE+++ A+ E E + +DV EN E C +C A + C H+FC C
Sbjct: 361 EQTKEEKEKVRAQKE-EVLNQMNDVLEN----ELQCIICSEHFIEAVTLNCAHSFCSYCI 415
Query: 350 RELWVQRGNCPLC 362
E ++ CP+C
Sbjct: 416 NEWMKRKVECPIC 428
>gi|395832286|ref|XP_003789204.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Otolemur garnettii]
Length = 484
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
Query: 109 FQTNPAGELASQLEDNRGAPPQFARRPSSK-----VASSSPGPTQSSHHEDSPEGEGSPT 163
+++ GE+++QL + P + P+ K V S P + H E + +P+
Sbjct: 185 VKSHGKGEVSNQLSECLD-PKLTSLEPNEKNTRTHVYSGLPEVLELHHKEKA----SNPS 239
Query: 164 RSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVARE---GTRRLAVVLAQERQLSAREA 220
S +L + +R+ + E + +V ++ G+ + V + QE Q +
Sbjct: 240 TSQSSLELFKVTMSRILKLKTQMHE-KQLAVLNVKKQTPKGSSKKIVKMEQELQDLQSQL 298
Query: 221 VAAQEAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMD---LLEETDR- 276
A Q A+ +A + E + E E E E +Q +L + L+EE +R
Sbjct: 299 CAEQ--AQQQARVEQLEKTFQEEEQHLQGLEKEQGEEDLKQQLAQALQEHRALMEELNRS 356
Query: 277 QMGLEGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGA 335
+ E A ++ ++ +E++ + +A+ E DV EN E C +C A
Sbjct: 357 KKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMTDVLEN----ELQCIICSEYFIEA 412
Query: 336 AFIPCGHTFCRLCSRELWVQRG-NCPLC 362
+ C H+FC C E W++R CP+C
Sbjct: 413 VTLNCAHSFCSYCINE-WMKRKIECPIC 439
>gi|154333263|ref|XP_001562892.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059897|emb|CAM37326.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 355
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 321 IEHNCCVCMVRHKGAAFIPCGHT-FCRLCSRELWVQRGNCPLCNGFILEILDI 372
+E C +C+ K +PC H C C+ L + CPLC G I ++ +
Sbjct: 303 MEGLCVICLTNQKDTTILPCRHMCLCNTCAAHLRLSNNRCPLCRGNIDRVMTL 355
>gi|403261990|ref|XP_003923381.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Saimiri boliviensis
boliviensis]
Length = 487
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 290 DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCS 349
++ +EE+++ +A+ E E +DV EN E C +C A + C H+FC C
Sbjct: 375 EQTKEEKEKMQAQKE-EVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSYCI 429
Query: 350 RELWVQRG-NCPLC 362
E W++R CP+C
Sbjct: 430 SE-WMKRKIECPIC 442
>gi|296198061|ref|XP_002746550.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 [Callithrix jacchus]
Length = 462
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 108/265 (40%), Gaps = 25/265 (9%)
Query: 115 GELASQLEDNRGAPPQFARRPSSKVASS--SPG-PTQSSHHEDSPEGEGSPTRSSRQPQL 171
GE+AS +N P A PS K + PG P + H S ++S+ QL
Sbjct: 169 GEVASTPSENLN-PKLAALEPSKKTTGAPIYPGFPKVTEAHHKQKASNSSASQST--LQL 225
Query: 172 SRHNSTRVEAASNTVSEDNSV--DPFDVAREGTRRLAVVLAQE-----RQLSAREAVAAQ 224
+ +R+ + E + ++G + V + QE QL A +A
Sbjct: 226 FKVTMSRILKLKIQMQEKQEAVRNVKKQTQKGHSKKIVKMEQELQDLQSQLCAEQAQQQA 285
Query: 225 EAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLLE--ETDRQMGLEG 282
+ E E E + VQ E + + + Q Q ++M+ L + D + ++
Sbjct: 286 RVEQLEKTFQEEEQHLQGLEIVQGEEDLKQ-QLAQALQEHRAVMEELNRSKKDFEAIIQA 344
Query: 283 SRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGH 342
+ + ++E+E+ +A+ E E +DV EN E C +C A + C H
Sbjct: 345 KNKELEQTKEEKEKMQAQKE---EVLSHMNDVLEN----ELQCIICSEYFIEAVTLNCAH 397
Query: 343 TFCRLCSRELWVQRG-NCPLCNGFI 366
+FC C E W++R CP+C I
Sbjct: 398 SFCSYCISE-WMKRKIECPICRKNI 421
>gi|327262298|ref|XP_003215962.1| PREDICTED: e3 ubiquitin-protein ligase RNF8-like [Anolis
carolinensis]
Length = 495
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 312 DDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFIL 367
+DV EN E C +C A + C H+FC C + R CP+C G I+
Sbjct: 398 NDVLEN----ELQCTICSEHFIEAVTLNCAHSFCSFCIDQWMKLRLECPICRGVII 449
>gi|417401782|gb|JAA47759.1| Putative e3 ubiquitin-protein ligase rnf8 [Desmodus rotundus]
Length = 487
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 18/268 (6%)
Query: 109 FQTNPAGELASQLEDNRGAPPQFARRPSSKV--ASSSPGPTQSSHHEDSPEGEGSPTRSS 166
+++ GE+ASQ + P + PS A SPGP + + P S
Sbjct: 187 LKSHGKGEMASQPSEPM-EPQSTSLEPSEHTTGARVSPGPPTVPELQHEEQRASDPLVSQ 245
Query: 167 RQPQLSRHNSTRVEAASNTVSEDNS--VDPFDVAREGTRRLAVVLAQERQLSAREAVAAQ 224
+ +L + +R+ + E ++ +++G + V + QE L ++
Sbjct: 246 SRLELIKVTMSRILKLKTQMQEKQEAVLNEKKQSQKGDSKNIVQMEQE--LRDLQSQLCA 303
Query: 225 EAAEAEAAAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMD---LLEETDR-QMGL 280
E A+ +A + E E E E E +Q +L + L+EE +R +
Sbjct: 304 EQAQQQARVEQLEKTFREEQQYLQGLEKEQGEENLKQQLAQALQEHWALMEELNRSKKDF 363
Query: 281 EGSRYAVGEDEDEEEEDEAEAEAEGE-YEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIP 339
E A ++ ++ +E++ + A+ E +DV EN E C +C A +
Sbjct: 364 EAIIQAKNKELEQTKEEKEKVRAQKEEVLSHVNDVLEN----ELQCIICSEYFIEAVTLN 419
Query: 340 CGHTFCRLCSRELWVQRG-NCPLCNGFI 366
C H+FC C E W++R CP+C I
Sbjct: 420 CAHSFCSFCISE-WMKRKIECPICRKDI 446
>gi|73972751|ref|XP_864730.1| PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform 2 [Canis lupus
familiaris]
Length = 487
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 290 DEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTFCRLCS 349
++ +EE+++ +A+ E E +DV EN E C +C A + C H+FC C
Sbjct: 375 EQTKEEKEKMQAQKE-EVLSHVNDVLEN----ELQCIICSEYFIEAVTLNCAHSFCSYCI 429
Query: 350 RELWVQRG-NCPLC 362
E W++R CP+C
Sbjct: 430 NE-WMKRKVECPIC 442
>gi|323453947|gb|EGB09818.1| hypothetical protein AURANDRAFT_63089 [Aureococcus anophagefferens]
Length = 462
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
C +CM K +PCGH C C+ + CP C G + + I+
Sbjct: 417 CPICMDGRKDTTLVPCGHVVCAACAGDA----ATCPTCRGAVSSTMRIY 461
>gi|225387343|ref|ZP_03757107.1| hypothetical protein CLOSTASPAR_01096 [Clostridium asparagiforme
DSM 15981]
gi|225046555|gb|EEG56801.1| hypothetical protein CLOSTASPAR_01096 [Clostridium asparagiforme
DSM 15981]
Length = 4356
Score = 39.7 bits (91), Expect = 2.3, Method: Composition-based stats.
Identities = 51/191 (26%), Positives = 78/191 (40%), Gaps = 26/191 (13%)
Query: 159 EGSPTRSSRQPQLSRHNSTRVEAASNTVSEDNSVDPFDVAREGTRRLAVVLAQERQLSAR 218
E T + P+ + +ST+ E N+ EGT A +RQ A
Sbjct: 200 ENGQTGDAVSPENTAQDSTQEENKQNST-------------EGTEGEAPAGGADRQEPAE 246
Query: 219 EAVA---AQEAAEAEA----AAAEAEAEAEAEASVQVEAEAEAAEPVQPRQPRMSLMDLL 271
A +QEA E+ A E EA+ E EA + E EA AAEP + + D
Sbjct: 247 NGEAETPSQEAGSQESQETQAQPETEAQPETEAEGEPETEAPAAEPTEKETEKEPETDEP 306
Query: 272 EETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEEN---AGGIEHNCCVC 328
+E R + RY V +D+EE++ A + E+ ++V E+ GGI
Sbjct: 307 QELSRSI---RERYVVTSSDDDEEDEGAGLVSLSFDEDATEEVMESLQEEGGIVSRVGAG 363
Query: 329 MVRHKGAAFIP 339
M++ +P
Sbjct: 364 MIKSTRLTLVP 374
>gi|326436176|gb|EGD81746.1| hypothetical protein PTSG_02458 [Salpingoeca sp. ATCC 50818]
Length = 606
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 322 EHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQ-RGNCPLCNGFILEILD 371
E C +CM A CGH+FCRLC+ EL CP C + ++L+
Sbjct: 313 ECECAICMSIMALPATFGCGHSFCRLCTLELLKSPNARCPHCRQPVKQVLE 363
>gi|221506522|gb|EEE32139.1| RING finger protein 6/12/38, putative [Toxoplasma gondii VEG]
Length = 1213
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 313 DVEENAGGIEHNCCVCMVRH---KGAAFIPCGHTFCRLCSRELWVQ-RGNCPLCNGFILE 368
D E G +CC+CM + + +PC H F C R W+Q + CPLC +
Sbjct: 1151 DAETEEGAF--DCCICMGEYAVSESLRRLPCMHAFHTSCLRR-WIQEKSTCPLCRFELTR 1207
Query: 369 IL 370
+L
Sbjct: 1208 ML 1209
>gi|348679850|gb|EGZ19666.1| hypothetical protein PHYSODRAFT_496249 [Phytophthora sojae]
Length = 833
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 12/52 (23%)
Query: 325 CCVCMVRHKGAAFIP----CGHTFCRLCSRELWVQR----GNCPLCNGFILE 368
C +C A F P CGH+FCR+C + ++ R CP+C IL+
Sbjct: 155 CIICQY----AMFKPVTAICGHSFCRVCLMDSFLTRSIEEAQCPICRVEILQ 202
>gi|183234591|ref|XP_653702.2| zinc finger domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|169801014|gb|EAL48316.2| zinc finger domain containing protein [Entamoeba histolytica
HM-1:IMSS]
gi|449705479|gb|EMD45514.1| zinc finger domain containing protein [Entamoeba histolytica KU27]
Length = 217
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 259 QPRQPRMSLMDLLEETDRQMGLEGSRYAVGEDEDEEEEDEAEAEAEGEYEEEGDDVEENA 318
QP+ +S+++ L+ + S + E E+ ++ + E + E E+ + +
Sbjct: 3 QPQHNSLSMIEQLQNKNS----NNSISTIEEKEETQDNQKEIPEEKEEKTEDVEKSTKET 58
Query: 319 GGIEHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
G + C +C+ + A CGH FC C RE ++ CP+C
Sbjct: 59 GQNQFECLICLDTAQNAVVTQCGHMFCWECLREWLTRQETCPIC 102
>gi|237832047|ref|XP_002365321.1| hypothetical protein TGME49_061990 [Toxoplasma gondii ME49]
gi|211962985|gb|EEA98180.1| hypothetical protein TGME49_061990 [Toxoplasma gondii ME49]
Length = 1290
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Query: 313 DVEENAGGIEHNCCVCMVRH---KGAAFIPCGHTFCRLCSRELWVQ-RGNCPLCNGFILE 368
D E G +CC+CM + + +PC H F C R W+Q + CPLC +
Sbjct: 1228 DAETEEGAF--DCCICMGEYAVSESLRRLPCMHAFHTSCLRR-WIQEKSTCPLCRFELTR 1284
Query: 369 IL 370
+L
Sbjct: 1285 ML 1286
>gi|321472786|gb|EFX83755.1| hypothetical protein DAPPUDRAFT_47904 [Daphnia pulex]
Length = 363
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 11/135 (8%)
Query: 246 VQVEAEAEAAEPVQPRQPRMSLMD-------LLEETDRQMGLEGSRYAVGEDEDEEEEDE 298
V + EAE + + Q L++ +L+ +++ ++ Y + +D E
Sbjct: 196 VVIVCEAEEGDDPKQHQATYCLIEHSSDASYVLKALKQKLYVDNLAYLL-QDIYGIENKL 254
Query: 299 AEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGH-TFCRLCSRELWVQRG 357
A+ + G E+ D +++ GG E C +CM + +PC H C+LC+ L Q
Sbjct: 255 ADEDDTGSVLEDCDPEDDDEGGGE--CVICMSEPRDTLILPCRHLCLCQLCADSLRYQAN 312
Query: 358 NCPLCNGFILEILDI 372
NCP+C +L I
Sbjct: 313 NCPICRAPFRALLQI 327
>gi|325181754|emb|CCA16210.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 435
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 322 EHNCCVCMVRHKGAAFIPCGH-TFCRLCSRELWVQRGNCPLCNGFILEILDIF 373
E+ C VC + A +PCGH C C+ E+ CP+C + EI+ ++
Sbjct: 381 ENECVVCFDAKQSAVCVPCGHQALCMECASEIMTSSRMCPVCRVSVREIIRLY 433
>gi|301617127|ref|XP_002937994.1| PREDICTED: nuclear factor 7, ovary-like [Xenopus (Silurana)
tropicalis]
Length = 644
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 322 EHNCCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRG--NCPLCNGFI 366
E C +C+ K + CGH FC+ C + W R +CP C I
Sbjct: 177 ELTCRLCVELFKDPVMVECGHNFCKACIEKAWAGRDSFSCPECKEVI 223
>gi|330845964|ref|XP_003294830.1| hypothetical protein DICPUDRAFT_159900 [Dictyostelium purpureum]
gi|325074629|gb|EGC28645.1| hypothetical protein DICPUDRAFT_159900 [Dictyostelium purpureum]
Length = 550
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 2/47 (4%)
Query: 325 CCVCMVR--HKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEI 369
CC+C + + I C H FC C + + CPLC I
Sbjct: 419 CCICYTQLNSDNSTSIDCSHKFCYRCITKWYQIEDTCPLCRKTFYYI 465
>gi|320164459|gb|EFW41358.1| checkpoint with forkhead and ring finger domains [Capsaspora
owczarzaki ATCC 30864]
Length = 532
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 312 DDVEENAGGIEHNCCVCM-VRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEI 369
DD+E+N C +CM + H + +PC H FC C + ++ +CP C + I
Sbjct: 169 DDMEQNL-----QCGICMEILHDCVSVVPCLHDFCGACYSDWMEKKSDCPTCRAKVTSI 222
>gi|357290953|gb|AET73553.1| hypothetical protein EMVG_00267 [Emiliania huxleyi virus PS401]
Length = 447
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 315 EENAGGIEHNCCVCMVRHKGAAFIPCGHTF-CRLCSRELWVQRGNCPLC 362
E +AGG + +C VC R K PCGH C LCS ++ +CPLC
Sbjct: 393 ESSAGG-DTSCVVCFTRPKTHLAYPCGHLCACALCSMKM----RSCPLC 436
>gi|330790908|ref|XP_003283537.1| hypothetical protein DICPUDRAFT_74533 [Dictyostelium purpureum]
gi|325086520|gb|EGC39908.1| hypothetical protein DICPUDRAFT_74533 [Dictyostelium purpureum]
Length = 440
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 322 EHNCCVCM--VRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC 362
E++C +CM + A I C H FC C E Q CP C
Sbjct: 335 EYDCIICMDKIEAINLATIDCSHNFCYGCILEWSYQDNTCPFC 377
>gi|443726379|gb|ELU13559.1| hypothetical protein CAPTEDRAFT_218257 [Capitella teleta]
Length = 540
Score = 38.1 bits (87), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 325 CCVCM-VRHKGAAFIPCGHTFCRLCSRELWVQRGN-CPLC 362
CC+C + H + PC H+FC C E W+QR CP C
Sbjct: 225 CCICQELLHNCISLQPCMHSFCAGCYSE-WMQRSKECPTC 263
>gi|225439436|ref|XP_002264526.1| PREDICTED: uncharacterized protein LOC100247198 [Vitis vinifera]
gi|296083155|emb|CBI22791.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 289 EDEDEEEEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGHTF-CRL 347
DE++ ++ +G+ +++G EN + C +C + F+PCGH C
Sbjct: 396 HDEEDAQDKLGVGGLDGKPKKDG----ENNSNPKRLCTICFDAPRDCFFLPCGHCVACFT 451
Query: 348 CSRELWVQRGNCPLCNGFILEILDIF 373
C + + G CP+C+ + ++ IF
Sbjct: 452 CGTRILEEDGTCPICSRNMKKVRKIF 477
>gi|344255885|gb|EGW11989.1| hypothetical protein I79_010110 [Cricetulus griseus]
Length = 439
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 21/46 (45%)
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLCNGFILEIL 370
C +CM PCGHTFC C +CPLC + E+L
Sbjct: 134 CALCMRLLFEPVTTPCGHTFCLKCLERCLDHAPHCPLCKDKLSELL 179
>gi|297724257|ref|NP_001174492.1| Os05g0520700 [Oryza sativa Japonica Group]
gi|255676495|dbj|BAH93220.1| Os05g0520700 [Oryza sativa Japonica Group]
Length = 709
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 323 HNCCVCMVRHKGAAFIPCGHT-FCRLCSRELWVQRGNCPLCNGFILEILDIF 373
H C VC + F+PCGH+ C C + + G+CPLC + ++ IF
Sbjct: 656 HLCVVCCDARRDCFFLPCGHSATCHACGTRVAEEDGSCPLCRRKLKKVRRIF 707
>gi|308799645|ref|XP_003074603.1| unnamed protein product [Ostreococcus tauri]
gi|116000774|emb|CAL50454.1| unnamed protein product [Ostreococcus tauri]
Length = 524
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 295 EEDEAEAEAEGEYEEEGDDVEENAGGIEHNCCVCMVRHKGAAFIPCGH-TFCRLCSRELW 353
EEDEA AE E + +G + C VCM IPCGH CR C+R +
Sbjct: 451 EEDEATAELSAETKPR-----MRSGVPDTECVVCMTTQVQCVLIPCGHACMCRKCARRMR 505
Query: 354 VQRGNCPLCNGFI 366
CP+C +
Sbjct: 506 ----RCPICRVIV 514
>gi|313238542|emb|CBY13593.1| unnamed protein product [Oikopleura dioica]
Length = 494
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 325 CCVCM-----VRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC--NGFILEILDIF 373
C +C H AA +PCGH F C + + GNCP C N + +++ +F
Sbjct: 438 CIICYDPYDDADHFAAA-LPCGHRFGNTCIKTSLQRNGNCPTCMKNFGVNDLIRLF 492
>gi|313213015|emb|CBY36896.1| unnamed protein product [Oikopleura dioica]
Length = 494
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 325 CCVCM-----VRHKGAAFIPCGHTFCRLCSRELWVQRGNCPLC--NGFILEILDIF 373
C +C H AA +PCGH F C + + GNCP C N + +++ +F
Sbjct: 438 CIICYDPYDDADHFAAA-LPCGHRFGNTCIKTSLQRNGNCPTCMKNFGVNDLIRLF 492
>gi|363755176|ref|XP_003647803.1| hypothetical protein Ecym_7137 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891839|gb|AET40986.1| hypothetical protein Ecym_7137 [Eremothecium cymbalariae
DBVPG#7215]
Length = 263
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 45/104 (43%), Gaps = 26/104 (25%)
Query: 285 YAVGEDEDE-----------EEEDEAEAEAEGEYEEEGDDVEENAGG---IEH------N 324
Y+VGED D+ EEE + + + E+E D + N G +EH
Sbjct: 137 YSVGEDGDQSIYGGRETIDVEEEAKLQQVVKIPDEQEQDLISGNQKGSSPVEHMKASDYR 196
Query: 325 CCVCMVRHKGAAFIPCGHTFCRLCSREL------WVQRGNCPLC 362
C +C + A PCGH +C +C ++ + + G C LC
Sbjct: 197 CPICFDPPEAALMTPCGHVYCTVCLFQMVNSSRGYRRNGQCALC 240
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.127 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,911,374,864
Number of Sequences: 23463169
Number of extensions: 265776757
Number of successful extensions: 3073527
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4714
Number of HSP's successfully gapped in prelim test: 25783
Number of HSP's that attempted gapping in prelim test: 2596006
Number of HSP's gapped (non-prelim): 246112
length of query: 373
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 229
effective length of database: 8,980,499,031
effective search space: 2056534278099
effective search space used: 2056534278099
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 77 (34.3 bits)