Query 017327
Match_columns 373
No_of_seqs 105 out of 116
Neff 4.2
Searched_HMMs 46136
Date Fri Mar 29 07:36:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/017327.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/017327hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF07082 DUF1350: Protein of u 100.0 1.5E-88 3.3E-93 643.0 22.1 247 73-370 1-250 (250)
2 KOG1455 Lysophospholipase [Lip 96.8 0.0058 1.2E-07 61.1 8.8 97 75-200 38-146 (313)
3 PLN02385 hydrolase; alpha/beta 96.1 0.041 9E-07 53.5 9.9 44 86-131 81-124 (349)
4 PRK10566 esterase; Provisional 95.8 0.099 2.1E-06 47.5 10.3 96 81-199 15-123 (249)
5 PLN02298 hydrolase, alpha/beta 95.7 0.07 1.5E-06 51.1 9.6 81 89-180 56-142 (330)
6 TIGR03101 hydr2_PEP hydrolase, 95.6 0.11 2.3E-06 50.5 10.3 89 85-198 18-114 (266)
7 TIGR03100 hydr1_PEP hydrolase, 95.2 0.14 3E-06 48.6 9.5 93 76-180 13-108 (274)
8 COG4757 Predicted alpha/beta h 94.7 0.063 1.4E-06 52.7 5.8 75 106-191 41-124 (281)
9 PLN02652 hydrolase; alpha/beta 94.1 0.18 3.9E-06 51.3 8.0 83 84-180 128-216 (395)
10 PHA02857 monoglyceride lipase; 93.9 0.44 9.5E-06 44.0 9.5 39 90-131 23-61 (276)
11 PRK10162 acetyl esterase; Prov 93.6 0.43 9.4E-06 46.5 9.2 96 80-198 71-169 (318)
12 PLN00021 chlorophyllase 93.4 0.46 1E-05 47.0 9.2 33 94-129 54-86 (313)
13 PF12740 Chlorophyllase2: Chlo 92.7 0.53 1.1E-05 46.2 8.3 41 86-129 11-51 (259)
14 PRK05077 frsA fermentation/res 92.2 0.75 1.6E-05 47.0 9.0 92 76-180 180-273 (414)
15 PF12146 Hydrolase_4: Putative 92.0 0.39 8.4E-06 38.4 5.4 42 83-128 8-49 (79)
16 TIGR01607 PST-A Plasmodium sub 92.0 0.74 1.6E-05 45.2 8.4 42 90-131 19-83 (332)
17 PRK10749 lysophospholipase L2; 91.2 1.7 3.7E-05 42.2 10.0 39 90-131 52-90 (330)
18 PF02450 LCAT: Lecithin:choles 91.2 1.1 2.4E-05 45.5 9.0 94 76-198 36-134 (389)
19 PF07859 Abhydrolase_3: alpha/ 91.1 0.44 9.5E-06 42.3 5.4 76 94-180 1-79 (211)
20 PF00975 Thioesterase: Thioest 90.4 0.71 1.5E-05 41.3 6.1 36 91-132 2-37 (229)
21 COG1506 DAP2 Dipeptidyl aminop 89.0 2.4 5.2E-05 45.6 9.7 99 71-180 372-481 (620)
22 PRK13604 luxD acyl transferase 89.0 3.3 7.1E-05 41.6 10.0 98 74-198 19-123 (307)
23 COG2267 PldB Lysophospholipase 87.6 0.51 1.1E-05 46.2 3.3 74 91-180 33-115 (298)
24 PLN02733 phosphatidylcholine-s 86.2 1.4 3.1E-05 46.0 5.9 82 92-198 91-177 (440)
25 PLN02211 methyl indole-3-aceta 85.3 5.9 0.00013 37.6 9.2 42 86-132 14-55 (273)
26 PLN02965 Probable pheophorbida 85.0 5.8 0.00013 36.5 8.7 37 91-130 2-38 (255)
27 COG0657 Aes Esterase/lipase [L 83.6 6 0.00013 37.9 8.5 83 89-180 77-160 (312)
28 TIGR03502 lipase_Pla1_cef extr 83.4 5.6 0.00012 44.8 9.2 34 94-130 451-484 (792)
29 PF12695 Abhydrolase_5: Alpha/ 83.0 3.7 7.9E-05 33.6 5.9 61 110-198 14-76 (145)
30 TIGR01836 PHA_synth_III_C poly 82.5 4.3 9.3E-05 39.8 7.1 59 111-180 83-144 (350)
31 TIGR03695 menH_SHCHC 2-succiny 81.9 5.9 0.00013 33.9 6.9 33 95-131 4-36 (251)
32 PRK10985 putative hydrolase; P 81.4 5.9 0.00013 38.5 7.5 56 110-180 75-139 (324)
33 TIGR02427 protocat_pcaD 3-oxoa 80.2 18 0.00039 31.1 9.5 33 93-129 14-46 (251)
34 PRK10673 acyl-CoA esterase; Pr 79.8 13 0.00028 33.4 8.8 45 83-131 7-51 (255)
35 PF12697 Abhydrolase_6: Alpha/ 78.5 12 0.00026 31.4 7.7 22 109-131 12-33 (228)
36 PLN02517 phosphatidylcholine-s 76.2 7.2 0.00016 42.9 6.9 78 92-198 146-228 (642)
37 PRK10115 protease 2; Provision 73.4 82 0.0018 34.7 14.3 202 75-324 427-653 (686)
38 PF10230 DUF2305: Uncharacteri 70.5 18 0.00038 34.9 7.5 61 110-180 17-92 (266)
39 KOG1515 Arylacetamide deacetyl 70.1 27 0.00059 35.5 9.0 81 92-182 91-176 (336)
40 TIGR01840 esterase_phb esteras 69.6 14 0.00029 33.5 6.2 40 267-306 150-197 (212)
41 PLN02511 hydrolase 69.1 19 0.0004 36.4 7.7 55 111-180 118-181 (388)
42 TIGR03056 bchO_mg_che_rel puta 69.0 25 0.00053 31.6 7.7 34 94-131 30-63 (278)
43 TIGR01250 pro_imino_pep_2 prol 68.8 21 0.00045 31.6 7.1 41 282-328 233-274 (288)
44 PF00326 Peptidase_S9: Prolyl 67.9 12 0.00026 33.5 5.5 70 111-200 3-81 (213)
45 PRK00870 haloalkane dehalogena 66.6 23 0.0005 33.4 7.3 23 109-131 60-82 (302)
46 PF03583 LIP: Secretory lipase 62.1 18 0.00038 35.4 5.8 65 113-186 17-85 (290)
47 PF01738 DLH: Dienelactone hyd 61.1 70 0.0015 28.8 9.1 96 80-199 3-114 (218)
48 TIGR01838 PHA_synth_I poly(R)- 58.9 21 0.00045 38.5 6.1 78 89-180 188-270 (532)
49 PF07515 DUF1528: Protein of u 58.1 6.5 0.00014 33.6 1.8 28 90-117 5-32 (106)
50 KOG2369 Lecithin:cholesterol a 55.1 29 0.00062 37.2 6.2 66 110-197 125-196 (473)
51 TIGR02821 fghA_ester_D S-formy 53.9 96 0.0021 29.4 9.1 41 281-325 211-257 (275)
52 TIGR02240 PHA_depoly_arom poly 53.8 29 0.00062 32.2 5.5 37 88-131 24-60 (276)
53 PLN03087 BODYGUARD 1 domain co 52.6 1.9E+02 0.0042 30.8 11.9 42 282-328 420-462 (481)
54 COG5423 Predicted metal-bindin 50.5 27 0.00058 32.4 4.5 91 263-356 54-152 (167)
55 PF15466 DUF4635: Domain of un 49.7 32 0.0007 30.8 4.7 54 317-371 61-124 (135)
56 PRK11126 2-succinyl-6-hydroxy- 49.5 61 0.0013 28.8 6.7 32 95-131 5-36 (242)
57 TIGR03611 RutD pyrimidine util 49.0 1.8E+02 0.0039 25.3 9.8 34 94-131 15-48 (257)
58 KOG2029 Uncharacterized conser 46.5 36 0.00078 37.8 5.5 56 122-197 478-540 (697)
59 COG4138 BtuD ABC-type cobalami 46.4 57 0.0012 31.7 6.2 71 70-144 127-203 (248)
60 PF07224 Chlorophyllase: Chlor 44.7 1.2E+02 0.0027 30.8 8.5 89 85-184 39-132 (307)
61 PLN02578 hydrolase 42.9 94 0.002 30.6 7.4 36 89-131 86-121 (354)
62 PLN02679 hydrolase, alpha/beta 42.1 98 0.0021 30.6 7.5 22 109-131 102-123 (360)
63 COG4822 CbiK Cobalamin biosynt 41.5 71 0.0015 31.6 6.1 109 113-229 64-230 (265)
64 PF10561 UPF0565: Uncharacteri 41.1 48 0.001 33.6 5.1 65 91-158 233-300 (303)
65 PLN02894 hydrolase, alpha/beta 38.8 3.1E+02 0.0067 27.9 10.6 35 93-131 106-140 (402)
66 PRK14875 acetoin dehydrogenase 38.7 78 0.0017 30.3 6.0 22 109-131 145-166 (371)
67 TIGR01738 bioH putative pimelo 38.4 1E+02 0.0022 26.4 6.1 26 104-131 14-39 (245)
68 PLN02872 triacylglycerol lipas 36.5 80 0.0017 32.5 6.0 19 112-130 97-115 (395)
69 PF13377 Peripla_BP_3: Peripla 35.7 2.6E+02 0.0056 23.3 8.2 78 96-180 13-106 (160)
70 KOG2800 Conserved developmenta 35.1 70 0.0015 33.1 5.1 63 92-154 294-359 (389)
71 PF12048 DUF3530: Protein of u 34.0 4E+02 0.0087 26.5 10.3 85 83-180 78-201 (310)
72 COG0525 ValS Valyl-tRNA synthe 33.7 39 0.00085 38.8 3.5 53 79-143 35-88 (877)
73 PLN02442 S-formylglutathione h 33.7 2.4E+02 0.0052 27.1 8.5 40 281-324 217-262 (283)
74 PF08538 DUF1749: Protein of u 33.0 1.2E+02 0.0027 30.7 6.5 83 91-181 32-117 (303)
75 COG0412 Dienelactone hydrolase 32.2 4.5E+02 0.0097 25.0 10.0 100 75-200 12-129 (236)
76 cd03409 Chelatase_Class_II Cla 31.7 1.5E+02 0.0032 23.5 5.7 45 106-153 44-89 (101)
77 cd00419 Ferrochelatase_C Ferro 31.0 1.1E+02 0.0024 26.9 5.2 38 112-149 80-118 (135)
78 cd00707 Pancreat_lipase_like P 30.6 2.5E+02 0.0055 27.1 8.1 72 108-200 51-129 (275)
79 PF03403 PAF-AH_p_II: Platelet 30.1 38 0.00083 34.6 2.5 21 108-128 113-133 (379)
80 PF04110 APG12: Ubiquitin-like 29.4 24 0.00052 29.5 0.7 30 261-290 53-82 (87)
81 TIGR00976 /NonD putative hydro 28.3 1.1E+02 0.0024 32.3 5.6 91 76-180 8-105 (550)
82 PF05014 Nuc_deoxyrib_tr: Nucl 27.8 1.1E+02 0.0023 25.4 4.4 57 97-157 2-62 (113)
83 cd02901 Macro_Poa1p_like Macro 27.4 3.7E+02 0.008 22.9 7.8 70 76-147 57-137 (140)
84 PRK05855 short chain dehydroge 26.8 1.9E+02 0.0041 29.6 6.7 33 94-130 27-59 (582)
85 PRK11071 esterase YqiA; Provis 26.6 2.2E+02 0.0047 25.8 6.5 65 103-199 10-77 (190)
86 TIGR03343 biphenyl_bphD 2-hydr 26.5 1.3E+02 0.0028 27.5 5.1 20 111-130 49-68 (282)
87 COG0549 ArcC Carbamate kinase 25.1 84 0.0018 32.1 3.7 44 70-136 155-203 (312)
88 PF10881 DUF2726: Protein of u 24.5 3.4E+02 0.0073 22.9 6.9 65 79-145 59-124 (126)
89 PF06821 Ser_hydrolase: Serine 24.4 68 0.0015 29.1 2.8 63 103-198 8-70 (171)
90 COG1647 Esterase/lipase [Gener 24.3 7.2E+02 0.016 24.8 11.4 73 102-200 24-102 (243)
91 PRK00035 hemH ferrochelatase; 24.2 1.1E+02 0.0023 30.3 4.4 36 110-145 249-285 (333)
92 PRK03592 haloalkane dehalogena 23.9 2.2E+02 0.0047 26.6 6.2 22 109-131 41-62 (295)
93 PRK09411 carbamate kinase; Rev 23.8 1E+02 0.0023 31.1 4.2 42 71-135 148-194 (297)
94 PF03969 AFG1_ATPase: AFG1-lik 22.3 1.5E+02 0.0032 30.5 5.0 39 111-157 147-192 (362)
95 cd03109 DTBS Dethiobiotin synt 21.6 2E+02 0.0044 24.6 5.1 50 91-141 40-89 (134)
96 COG0429 Predicted hydrolase of 21.6 4.5E+02 0.0098 27.4 8.2 93 71-182 48-158 (345)
97 KOG1502 Flavonol reductase/cin 20.5 83 0.0018 32.2 2.8 22 112-133 20-41 (327)
98 smart00506 A1pp Appr-1"-p proc 20.4 2.6E+02 0.0057 23.1 5.4 65 76-141 57-131 (133)
No 1
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=100.00 E-value=1.5e-88 Score=643.00 Aligned_cols=247 Identities=42% Similarity=0.741 Sum_probs=225.1
Q ss_pred cceEeccEEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCCCCChHHHHHHHHHHHHHHHH
Q 017327 73 IYQRLGSCLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNVTFDHANAANQVYERFNSCLD 152 (373)
Q Consensus 73 ~w~~~~~~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~tFDH~~iA~ev~~~F~~~~~ 152 (373)
+|++++++||+.|| +|+|||||||||||||+||||||+|||+|+++||+||||||++||||+++|++++++|++|++
T Consensus 1 ~w~~i~~~wvl~P~---~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~ 77 (250)
T PF07082_consen 1 DWQEISGSWVLIPP---RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQAIAREVWERFERCLR 77 (250)
T ss_pred CcccccCcEEEeCC---CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Confidence 69999999999995 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhhhhhhhccccccchhHHHhhhccchhHHHHhhhhhccCC
Q 017327 153 YVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQMMPIVEASPVYSMARNASGDAWKLLLNTAEALIP 232 (373)
Q Consensus 153 ~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~L~p~~~asp~~~~~R~a~~~~~k~l~n~ag~l~~ 232 (373)
.|.+++. + +..++|+|||||| ||||||.|++ +.++..| +||
T Consensus 78 ~L~~~~~----~---~~~~lP~~~vGHS-----------lGcklhlLi~-----s~~~~~r-------------~gn--- 118 (250)
T PF07082_consen 78 ALQKRGG----L---DPAYLPVYGVGHS-----------LGCKLHLLIG-----SLFDVER-------------AGN--- 118 (250)
T ss_pred HHHHhcC----C---CcccCCeeeeecc-----------cchHHHHHHh-----hhccCcc-------------cce---
Confidence 9998742 2 3567999999999 9999999997 3334444 333
Q ss_pred CCchHHHHhhHHHH--hhhhhhhhhhcCC-cccccCChHHHHHHHHhccccccceeEEecCCCCCCcHHHHHHhchhhhc
Q 017327 233 GSDMESLVSLNNFV--DQLPSVFGQVTEG-ISEFKPTPSENLDCFKKSYNVQHTLLVKFSFDTIDQTDLLEETLKPRMES 309 (373)
Q Consensus 233 ~~~~~i~~s~~nfv--dqLp~~~~~va~G-~~EF~PsP~ET~~LI~~~Y~v~rnLLIkF~dD~IDqT~~L~~~L~~r~~s 309 (373)
+++||||+- +.||. +.+++.. ++||+|||+||+++|+++|.++|||||||++|+||||+.|+++|++|.
T Consensus 119 -----iliSFNN~~a~~aIP~-~~~l~~~l~~EF~PsP~ET~~li~~~Y~~~rnLLIkF~~D~iDqt~~L~~~L~~r~-- 190 (250)
T PF07082_consen 119 -----ILISFNNFPADEAIPL-LEQLAPALRLEFTPSPEETRRLIRESYQVRRNLLIKFNDDDIDQTDELEQILQQRF-- 190 (250)
T ss_pred -----EEEecCChHHHhhCch-HhhhccccccCccCCHHHHHHHHHHhcCCccceEEEecCCCccchHHHHHHHhhhc--
Confidence 789999954 37775 5555543 789999999999999999999999999999999999999999999994
Q ss_pred cCCceeEEeecCCCcccCCCCCCCCCCCcCChHHHHHHHHHHhHHHHHHHHHHHHHhhhcC
Q 017327 310 IGGTVEKVQLNGNHITPCIQEPKWQVGYIYTPADAIAQGLKTLSLNEIRILSKTISGWFGR 370 (373)
Q Consensus 310 ~~~~v~~~~LpGnHLTPl~qd~~~~~G~~~tP~Dai~q~lk~~~~~d~~~L~~~i~~W~~~ 370 (373)
++++++++|||||||||+|+++||+|.+|||+|||+||+|+++++|+++|+++|++||||
T Consensus 191 -~~~~~~~~L~G~HLTPl~q~~~~~~g~~ftP~da~~q~~k~~~~~d~~~L~~~i~~Wl~~ 250 (250)
T PF07082_consen 191 -PDMVSIQTLPGNHLTPLGQDLKWQVGSSFTPLDAVGQWLKQEVLRDLRRLKREILDWLNP 250 (250)
T ss_pred -cccceEEeCCCCCCCcCcCCcCCccCCccCchHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 467999999999999999999999999999999999999999999999999999999997
No 2
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.80 E-value=0.0058 Score=61.12 Aligned_cols=97 Identities=26% Similarity=0.426 Sum_probs=72.2
Q ss_pred eEeccEEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEe------------cCCCCCChHHHHHH
Q 017327 75 QRLGSCLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISV------------PYNVTFDHANAANQ 142 (373)
Q Consensus 75 ~~~~~~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAt------------Py~~tFDH~~iA~e 142 (373)
.+++.++-+|- ++.+|+|+|-|+-|. |.-=..+|+.+-.+|++.||.|.|. .|+.+|||. .+.
T Consensus 38 ~~lft~~W~p~-~~~~pr~lv~~~HG~--g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~--v~D 112 (313)
T KOG1455|consen 38 AKLFTQSWLPL-SGTEPRGLVFLCHGY--GEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLV--VDD 112 (313)
T ss_pred CEeEEEecccC-CCCCCceEEEEEcCC--cccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHH--HHH
Confidence 44555544431 334899999999995 4445589999999999999999997 678889884 577
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhhhhhhhc
Q 017327 143 VYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQMM 200 (373)
Q Consensus 143 v~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~L~ 200 (373)
|..-|+....+- +...+|.|-+||| ||..+.+++
T Consensus 113 ~~~~~~~i~~~~-------------e~~~lp~FL~GeS-----------MGGAV~Ll~ 146 (313)
T KOG1455|consen 113 VISFFDSIKERE-------------ENKGLPRFLFGES-----------MGGAVALLI 146 (313)
T ss_pred HHHHHHHHhhcc-------------ccCCCCeeeeecC-----------cchHHHHHH
Confidence 777777533221 2456899999999 988877765
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=96.08 E-value=0.041 Score=53.51 Aligned_cols=44 Identities=20% Similarity=0.392 Sum_probs=34.4
Q ss_pred CCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 86 LNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 86 p~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
|...+|+++|-|+-|. |......|+.+.+.|+++||.|++.=|.
T Consensus 81 p~~~~~~~~iv~lHG~--~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 124 (349)
T PLN02385 81 PENSRPKAAVCFCHGY--GDTCTFFFEGIARKIASSGYGVFAMDYP 124 (349)
T ss_pred cCCCCCCeEEEEECCC--CCccchHHHHHHHHHHhCCCEEEEecCC
Confidence 3344789999999993 4444566789999999999999998554
No 4
>PRK10566 esterase; Provisional
Probab=95.75 E-value=0.099 Score=47.46 Aligned_cols=96 Identities=23% Similarity=0.318 Sum_probs=58.9
Q ss_pred EEeCCCCC-CCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCC-C----------CCh-HHHHHHHHHHH
Q 017327 81 LIIPPLNG-KKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNV-T----------FDH-ANAANQVYERF 147 (373)
Q Consensus 81 ~vl~Pp~~-~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~-t----------FDH-~~iA~ev~~~F 147 (373)
+.+.|+.. .++..+|-|+-| +-+. ...|+.+...|+++||.|++.-|.- + ++. +.......+.+
T Consensus 15 ~~~~p~~~~~~~~p~vv~~HG-~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (249)
T PRK10566 15 LHAFPAGQRDTPLPTVFFYHG-FTSS--KLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEF 91 (249)
T ss_pred EEEcCCCCCCCCCCEEEEeCC-CCcc--cchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHH
Confidence 33445322 345567777777 3232 2468999999999999999997752 1 111 12222334555
Q ss_pred HHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhhhhhhh
Q 017327 148 NSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQM 199 (373)
Q Consensus 148 ~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~L 199 (373)
...++.+.+.+. ...-.++.+||| +|+-+.+.
T Consensus 92 ~~~~~~l~~~~~---------~~~~~i~v~G~S-----------~Gg~~al~ 123 (249)
T PRK10566 92 PTLRAAIREEGW---------LLDDRLAVGGAS-----------MGGMTALG 123 (249)
T ss_pred HHHHHHHHhcCC---------cCccceeEEeec-----------ccHHHHHH
Confidence 556666665421 233478999999 88887753
No 5
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=95.70 E-value=0.07 Score=51.08 Aligned_cols=81 Identities=21% Similarity=0.222 Sum_probs=50.4
Q ss_pred CCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCC-C-----CChHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 017327 89 KKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNV-T-----FDHANAANQVYERFNSCLDYVLSTGLPDA 162 (373)
Q Consensus 89 ~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~-t-----FDH~~iA~ev~~~F~~~~~~L~~~g~~~~ 162 (373)
..|+++|-||=|.- ..-...|..+.+.|+++||.|++.=+.- | ..|..--....+.....++.|..+.
T Consensus 56 ~~~~~~VvllHG~~--~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~---- 129 (330)
T PLN02298 56 SPPRALIFMVHGYG--NDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQRE---- 129 (330)
T ss_pred CCCceEEEEEcCCC--CCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcc----
Confidence 35799999999973 2224567888899999999999985541 1 1111111223344455555655431
Q ss_pred CCCCCCCCCCCeeeecCC
Q 017327 163 NLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 163 gl~~~~~~~lPv~gVGHS 180 (373)
....+|++.+|||
T Consensus 130 -----~~~~~~i~l~GhS 142 (330)
T PLN02298 130 -----EFQGLPRFLYGES 142 (330)
T ss_pred -----cCCCCCEEEEEec
Confidence 1234689999999
No 6
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=95.57 E-value=0.11 Score=50.49 Aligned_cols=89 Identities=20% Similarity=0.248 Sum_probs=54.3
Q ss_pred CCCCCCCcEEEEeeccccccccc---hhhHHHHHHHHHhCCcEEEEecCCC-CC---ChHH-HHHHHHHHHHHHHHHHHh
Q 017327 85 PLNGKKPRAIIKFLGGAFIGAVP---EVTYSYLKELLAKEGFLVISVPYNV-TF---DHAN-AANQVYERFNSCLDYVLS 156 (373)
Q Consensus 85 Pp~~~~P~gVIhFiGGAfvGa~P---qitYr~LLE~La~~Gy~ViAtPy~~-tF---DH~~-iA~ev~~~F~~~~~~L~~ 156 (373)
+|.+.+|+++|-|+-|. |..- .-.++.+-+.|+++||.|++.=|.- +. ++.. --....+....+++.|.+
T Consensus 18 ~p~~~~~~~~VlllHG~--g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~ 95 (266)
T TIGR03101 18 PPVAVGPRGVVIYLPPF--AEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIE 95 (266)
T ss_pred cCCCCCCceEEEEECCC--cccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHh
Confidence 45555789999999983 3211 2345667899999999999997753 11 1110 001122233344555554
Q ss_pred cCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhhhhhh
Q 017327 157 TGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQ 198 (373)
Q Consensus 157 ~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~ 198 (373)
.+. -|++.+||| ||+.+.+
T Consensus 96 ~~~------------~~v~LvG~S-----------mGG~vAl 114 (266)
T TIGR03101 96 QGH------------PPVTLWGLR-----------LGALLAL 114 (266)
T ss_pred cCC------------CCEEEEEEC-----------HHHHHHH
Confidence 321 489999999 8888765
No 7
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=95.19 E-value=0.14 Score=48.62 Aligned_cols=93 Identities=19% Similarity=0.242 Sum_probs=55.4
Q ss_pred EeccEEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCC-CCC-hH-HHHHHHHHHHHHHHH
Q 017327 76 RLGSCLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNV-TFD-HA-NAANQVYERFNSCLD 152 (373)
Q Consensus 76 ~~~~~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~-tFD-H~-~iA~ev~~~F~~~~~ 152 (373)
.+.+++..|. ...+.+||.|.||...-....-.|..+.+.|+++||.|++.-|.- +.. .. .--....+....+++
T Consensus 13 ~l~g~~~~p~--~~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~ 90 (274)
T TIGR03100 13 TLVGVLHIPG--ASHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAID 90 (274)
T ss_pred EEEEEEEcCC--CCCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 4556666533 334578999999874322223346789999999999999986652 100 00 011233455666676
Q ss_pred HHHhcCCCCCCCCCCCCCCCCeeeecCC
Q 017327 153 YVLSTGLPDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 153 ~L~~~g~~~~gl~~~~~~~lPv~gVGHS 180 (373)
.|.+. .+ |+ -+++.+|||
T Consensus 91 ~l~~~-~~--g~-------~~i~l~G~S 108 (274)
T TIGR03100 91 AFREA-AP--HL-------RRIVAWGLC 108 (274)
T ss_pred HHHhh-CC--CC-------CcEEEEEEC
Confidence 66543 10 11 247899999
No 8
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=94.68 E-value=0.063 Score=52.67 Aligned_cols=75 Identities=24% Similarity=0.270 Sum_probs=56.4
Q ss_pred cchhhHHHHHHHHHhCCcEEEEecCCC------CCCh---HHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeee
Q 017327 106 VPEVTYSYLKELLAKEGFLVISVPYNV------TFDH---ANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYS 176 (373)
Q Consensus 106 ~PqitYr~LLE~La~~Gy~ViAtPy~~------tFDH---~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~g 176 (373)
.++.+||+|-+.++++||.|...-|.- .--| +..++=....|..+++.+.+. ....|.|.
T Consensus 41 v~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~-----------~~~~P~y~ 109 (281)
T COG4757 41 VGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKA-----------LPGHPLYF 109 (281)
T ss_pred cchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhh-----------CCCCceEE
Confidence 578999999999999999999888862 1222 444555677888888888763 23479999
Q ss_pred ecCCCCcCccchhhh
Q 017327 177 VGHRPATEAVPYFEQ 191 (373)
Q Consensus 177 VGHS~a~~AvP~f~~ 191 (373)
||||-+..++-++.+
T Consensus 110 vgHS~GGqa~gL~~~ 124 (281)
T COG4757 110 VGHSFGGQALGLLGQ 124 (281)
T ss_pred eeccccceeeccccc
Confidence 999966666666554
No 9
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=94.14 E-value=0.18 Score=51.28 Aligned_cols=83 Identities=19% Similarity=0.189 Sum_probs=51.4
Q ss_pred CCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCC-CC-C---h-HHHHHHHHHHHHHHHHHHHhc
Q 017327 84 PPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNV-TF-D---H-ANAANQVYERFNSCLDYVLST 157 (373)
Q Consensus 84 ~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~-tF-D---H-~~iA~ev~~~F~~~~~~L~~~ 157 (373)
+.|....|+++|-|+=|.. .. .-.|+.+.+.|+++||.|++.=+.- |. + + ..-.+...+..+..++.+...
T Consensus 128 ~~p~~~~~~~~Vl~lHG~~--~~-~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~ 204 (395)
T PLN02652 128 WAPAAGEMRGILIIIHGLN--EH-SGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSE 204 (395)
T ss_pred ecCCCCCCceEEEEECCch--HH-HHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHh
Confidence 3444456889999998853 22 2348999999999999999985541 11 1 0 111122333445555555432
Q ss_pred CCCCCCCCCCCCCCCCeeeecCC
Q 017327 158 GLPDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 158 g~~~~gl~~~~~~~lPv~gVGHS 180 (373)
....|++.+|||
T Consensus 205 -----------~~~~~i~lvGhS 216 (395)
T PLN02652 205 -----------NPGVPCFLFGHS 216 (395)
T ss_pred -----------CCCCCEEEEEEC
Confidence 123589999999
No 10
>PHA02857 monoglyceride lipase; Provisional
Probab=93.93 E-value=0.44 Score=43.96 Aligned_cols=39 Identities=31% Similarity=0.370 Sum_probs=31.5
Q ss_pred CCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 90 KPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 90 ~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
.|+++|-|+=|. |. ..-.|+.+.+.|+++||.|+|.=+.
T Consensus 23 ~~~~~v~llHG~--~~-~~~~~~~~~~~l~~~g~~via~D~~ 61 (276)
T PHA02857 23 YPKALVFISHGA--GE-HSGRYEELAENISSLGILVFSHDHI 61 (276)
T ss_pred CCCEEEEEeCCC--cc-ccchHHHHHHHHHhCCCEEEEccCC
Confidence 678999887774 33 3668999999999999999998444
No 11
>PRK10162 acetyl esterase; Provisional
Probab=93.57 E-value=0.43 Score=46.54 Aligned_cols=96 Identities=20% Similarity=0.263 Sum_probs=60.1
Q ss_pred EEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhC-CcEEEEecCCCCCChH--HHHHHHHHHHHHHHHHHHh
Q 017327 80 CLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKE-GFLVISVPYNVTFDHA--NAANQVYERFNSCLDYVLS 156 (373)
Q Consensus 80 ~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~-Gy~ViAtPy~~tFDH~--~iA~ev~~~F~~~~~~L~~ 156 (373)
..++.|..... ..||.|=||.|+.-.+. +++.+++.|+++ |+.||+.=|...-+|- ..-+++.. +++.+.+
T Consensus 71 ~~~y~P~~~~~-p~vv~~HGGg~~~g~~~-~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~----a~~~l~~ 144 (318)
T PRK10162 71 TRLYYPQPDSQ-ATLFYLHGGGFILGNLD-THDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVA----VCCYFHQ 144 (318)
T ss_pred EEEECCCCCCC-CEEEEEeCCcccCCCch-hhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHH----HHHHHHH
Confidence 34454433333 47999999999866665 477899999974 9999999999877763 12233333 3333332
Q ss_pred cCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhhhhhh
Q 017327 157 TGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQ 198 (373)
Q Consensus 157 ~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~ 198 (373)
.. ..+| ...-.++.+||| +|.-+.+
T Consensus 145 ~~-~~~~-----~d~~~i~l~G~S-----------aGG~la~ 169 (318)
T PRK10162 145 HA-EDYG-----INMSRIGFAGDS-----------AGAMLAL 169 (318)
T ss_pred hH-HHhC-----CChhHEEEEEEC-----------HHHHHHH
Confidence 10 0111 122468999999 7776654
No 12
>PLN00021 chlorophyllase
Probab=93.42 E-value=0.46 Score=47.01 Aligned_cols=33 Identities=30% Similarity=0.555 Sum_probs=24.4
Q ss_pred EEEeeccccccccchhhHHHHHHHHHhCCcEEEEec
Q 017327 94 IIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVP 129 (373)
Q Consensus 94 VIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtP 129 (373)
+|-|+=|... ..-.|+++++.|+++||.|+|.=
T Consensus 54 vVv~lHG~~~---~~~~y~~l~~~Las~G~~VvapD 86 (313)
T PLN00021 54 VLLFLHGYLL---YNSFYSQLLQHIASHGFIVVAPQ 86 (313)
T ss_pred EEEEECCCCC---CcccHHHHHHHHHhCCCEEEEec
Confidence 4555545432 24579999999999999999963
No 13
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=92.67 E-value=0.53 Score=46.20 Aligned_cols=41 Identities=24% Similarity=0.391 Sum_probs=33.4
Q ss_pred CCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEec
Q 017327 86 LNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVP 129 (373)
Q Consensus 86 p~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtP 129 (373)
|+..-.--||-|++|.. ...-.|+.+|+++|..||+||+.=
T Consensus 11 P~~~g~yPVv~f~~G~~---~~~s~Ys~ll~hvAShGyIVV~~d 51 (259)
T PF12740_consen 11 PSSAGTYPVVLFLHGFL---LINSWYSQLLEHVASHGYIVVAPD 51 (259)
T ss_pred cCCCCCcCEEEEeCCcC---CCHHHHHHHHHHHHhCceEEEEec
Confidence 45455567899999988 344459999999999999999985
No 14
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=92.16 E-value=0.75 Score=47.01 Aligned_cols=92 Identities=15% Similarity=0.281 Sum_probs=51.7
Q ss_pred EeccEEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCC-CC-ChHHHHHHHHHHHHHHHHH
Q 017327 76 RLGSCLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNV-TF-DHANAANQVYERFNSCLDY 153 (373)
Q Consensus 76 ~~~~~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~-tF-DH~~iA~ev~~~F~~~~~~ 153 (373)
.+.+++.+|. +..|..+|=++|| +++.-.-.|+.+.+.|+++||+|++.=|.- |. ++.............+++.
T Consensus 180 ~l~g~l~~P~--~~~~~P~Vli~gG--~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~ 255 (414)
T PRK05077 180 PITGFLHLPK--GDGPFPTVLVCGG--LDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNA 255 (414)
T ss_pred EEEEEEEECC--CCCCccEEEEeCC--cccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHH
Confidence 5666666654 2344555556677 233223357888999999999999985542 11 1111111111122345666
Q ss_pred HHhcCCCCCCCCCCCCCCCCeeeecCC
Q 017327 154 VLSTGLPDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 154 L~~~g~~~~gl~~~~~~~lPv~gVGHS 180 (373)
|.... .+..-++..+|||
T Consensus 256 l~~~~---------~vd~~ri~l~G~S 273 (414)
T PRK05077 256 LPNVP---------WVDHTRVAAFGFR 273 (414)
T ss_pred HHhCc---------ccCcccEEEEEEC
Confidence 65431 1334588999999
No 15
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=92.05 E-value=0.39 Score=38.45 Aligned_cols=42 Identities=24% Similarity=0.379 Sum_probs=34.4
Q ss_pred eCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEe
Q 017327 83 IPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISV 128 (373)
Q Consensus 83 l~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAt 128 (373)
.|+|... |||+|.++=|. .--.-.|..|.+.|+++||+|++.
T Consensus 8 ~w~p~~~-~k~~v~i~HG~---~eh~~ry~~~a~~L~~~G~~V~~~ 49 (79)
T PF12146_consen 8 RWKPENP-PKAVVVIVHGF---GEHSGRYAHLAEFLAEQGYAVFAY 49 (79)
T ss_pred EecCCCC-CCEEEEEeCCc---HHHHHHHHHHHHHHHhCCCEEEEE
Confidence 3445544 89999999998 345558999999999999999975
No 16
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=91.97 E-value=0.74 Score=45.19 Aligned_cols=42 Identities=19% Similarity=0.271 Sum_probs=29.3
Q ss_pred CCcEEEEeeccccccc-------cchh------------hH----HHHHHHHHhCCcEEEEecCC
Q 017327 90 KPRAIIKFLGGAFIGA-------VPEV------------TY----SYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 90 ~P~gVIhFiGGAfvGa-------~Pqi------------tY----r~LLE~La~~Gy~ViAtPy~ 131 (373)
.|||+|.++=|.-=-+ ...+ .| ..|.|.|.++||.|++.-..
T Consensus 19 ~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~r 83 (332)
T TIGR01607 19 NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQ 83 (332)
T ss_pred CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEeccc
Confidence 6899999987722111 1111 33 67999999999999997553
No 17
>PRK10749 lysophospholipase L2; Provisional
Probab=91.24 E-value=1.7 Score=42.20 Aligned_cols=39 Identities=18% Similarity=0.148 Sum_probs=30.8
Q ss_pred CCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 90 KPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 90 ~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
.|+++|-|+.|. +... ..|+.+.+.|+++||.|++.=+.
T Consensus 52 ~~~~~vll~HG~--~~~~-~~y~~~~~~l~~~g~~v~~~D~~ 90 (330)
T PRK10749 52 HHDRVVVICPGR--IESY-VKYAELAYDLFHLGYDVLIIDHR 90 (330)
T ss_pred CCCcEEEEECCc--cchH-HHHHHHHHHHHHCCCeEEEEcCC
Confidence 467789999994 3332 37999999999999999998654
No 18
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=91.18 E-value=1.1 Score=45.46 Aligned_cols=94 Identities=17% Similarity=0.253 Sum_probs=54.5
Q ss_pred EeccEEEeCCCCCCCCcEEEEeec-cccccccchhhHHHHHHHHHhCCc----EEEEecCCCCCChHHHHHHHHHHHHHH
Q 017327 76 RLGSCLIIPPLNGKKPRAIIKFLG-GAFIGAVPEVTYSYLKELLAKEGF----LVISVPYNVTFDHANAANQVYERFNSC 150 (373)
Q Consensus 76 ~~~~~~vl~Pp~~~~P~gVIhFiG-GAfvGa~PqitYr~LLE~La~~Gy----~ViAtPy~~tFDH~~iA~ev~~~F~~~ 150 (373)
...++-+-+ |.-+.-.| |+++- ..+.|.. .|..|++.|.+.|| .+.|.||..-.... ..++...+....
T Consensus 36 ~~~gv~i~~-~~~g~~~~-i~~ld~~~~~~~~---~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ 109 (389)
T PF02450_consen 36 NDPGVEIRV-PGFGGTSG-IEYLDPSFITGYW---YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQL 109 (389)
T ss_pred cCCCceeec-CCCCceee-eeecccccccccc---hHHHHHHHHHhcCcccCCEEEEEeechhhchh-hHHHHHHHHHHH
Confidence 344454443 44332233 35554 3333333 89999999999777 57999998766655 222233333333
Q ss_pred HHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhhhhhh
Q 017327 151 LDYVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQ 198 (373)
Q Consensus 151 ~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~ 198 (373)
++...+ ...-||..|||| ||+.+.+
T Consensus 110 ie~~~~------------~~~~kv~li~HS-----------mGgl~~~ 134 (389)
T PF02450_consen 110 IEEAYK------------KNGKKVVLIAHS-----------MGGLVAR 134 (389)
T ss_pred HHHHHH------------hcCCcEEEEEeC-----------CCchHHH
Confidence 333322 124699999999 8777653
No 19
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=91.12 E-value=0.44 Score=42.27 Aligned_cols=76 Identities=21% Similarity=0.306 Sum_probs=46.8
Q ss_pred EEEeeccccccccchhhHHHHHHHHHh-CCcEEEEecCCCC--CChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC
Q 017327 94 IIKFLGGAFIGAVPEVTYSYLKELLAK-EGFLVISVPYNVT--FDHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLV 170 (373)
Q Consensus 94 VIhFiGGAfvGa~PqitYr~LLE~La~-~Gy~ViAtPy~~t--FDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~ 170 (373)
||+|=||+|+.-.+... ..+.+.|++ .|++|+..=|... -.+-.+-+++...++-.++...+-+ ..
T Consensus 1 v~~~HGGg~~~g~~~~~-~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~----------~d 69 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESH-WPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLG----------ID 69 (211)
T ss_dssp EEEE--STTTSCGTTTH-HHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHT----------EE
T ss_pred CEEECCcccccCChHHH-HHHHHHHHhhccEEEEEeeccccccccccccccccccceeeecccccccc----------cc
Confidence 78999999997777655 777888885 8999999878764 4444555555444443333332212 12
Q ss_pred CCCeeeecCC
Q 017327 171 NLPIYSVGHR 180 (373)
Q Consensus 171 ~lPv~gVGHS 180 (373)
.-.++-+|||
T Consensus 70 ~~~i~l~G~S 79 (211)
T PF07859_consen 70 PERIVLIGDS 79 (211)
T ss_dssp EEEEEEEEET
T ss_pred ccceEEeecc
Confidence 2478999999
No 20
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=90.39 E-value=0.71 Score=41.34 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=25.3
Q ss_pred CcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCC
Q 017327 91 PRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNV 132 (373)
Q Consensus 91 P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~ 132 (373)
|.-++|-.||.- ..|+.|.+.|.+.++.|.+..+..
T Consensus 2 ~lf~~p~~gG~~------~~y~~la~~l~~~~~~v~~i~~~~ 37 (229)
T PF00975_consen 2 PLFCFPPAGGSA------SSYRPLARALPDDVIGVYGIEYPG 37 (229)
T ss_dssp EEEEESSTTCSG------GGGHHHHHHHTTTEEEEEEECSTT
T ss_pred eEEEEcCCccCH------HHHHHHHHhCCCCeEEEEEEecCC
Confidence 445566677732 368999999988777788776654
No 21
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=88.98 E-value=2.4 Score=45.59 Aligned_cols=99 Identities=19% Similarity=0.146 Sum_probs=59.0
Q ss_pred cccceEeccEEEeCCCCCC--CCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCC-CCChHHHHH------
Q 017327 71 NKIYQRLGSCLIIPPLNGK--KPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNV-TFDHANAAN------ 141 (373)
Q Consensus 71 ~~~w~~~~~~~vl~Pp~~~--~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~-tFDH~~iA~------ 141 (373)
+.+=+++.+|+.+|+.... ++=.||..-||---.-. -+|.++.+.|+.+||+|++.=|.- +.-=+.-+.
T Consensus 372 ~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~--~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~ 449 (620)
T COG1506 372 SNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVG--YSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDW 449 (620)
T ss_pred cCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccc--cccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhcc
Confidence 3334477777777652221 12378999999522222 389999999999999999996663 221122222
Q ss_pred --HHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCC
Q 017327 142 --QVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 142 --ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS 180 (373)
.-++....+++.|.+.+. ...--+...|||
T Consensus 450 g~~~~~D~~~~~~~l~~~~~---------~d~~ri~i~G~S 481 (620)
T COG1506 450 GGVDLEDLIAAVDALVKLPL---------VDPERIGITGGS 481 (620)
T ss_pred CCccHHHHHHHHHHHHhCCC---------cChHHeEEeccC
Confidence 233344455665555433 222346789999
No 22
>PRK13604 luxD acyl transferase; Provisional
Probab=88.98 E-value=3.3 Score=41.63 Aligned_cols=98 Identities=17% Similarity=0.162 Sum_probs=62.2
Q ss_pred ceEeccEEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCC--C-----CChHHHHHHHHHH
Q 017327 74 YQRLGSCLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNV--T-----FDHANAANQVYER 146 (373)
Q Consensus 74 w~~~~~~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~--t-----FDH~~iA~ev~~~ 146 (373)
=.++.+||..|.-+...|+.+|=|.-|.-. . .-.|..+-+.|+++||.|+..=|.- | |.+..+... ...
T Consensus 19 G~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~-~--~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g-~~D 94 (307)
T PRK13604 19 GQSIRVWETLPKENSPKKNNTILIASGFAR-R--MDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIG-KNS 94 (307)
T ss_pred CCEEEEEEEcCcccCCCCCCEEEEeCCCCC-C--hHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCccccc-HHH
Confidence 456778887764223356666666555433 2 3459999999999999999876431 2 212222222 345
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhhhhhh
Q 017327 147 FNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQ 198 (373)
Q Consensus 147 F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~ 198 (373)
...+++.+.+.+. -+++.+||| ||.....
T Consensus 95 l~aaid~lk~~~~------------~~I~LiG~S-----------mGgava~ 123 (307)
T PRK13604 95 LLTVVDWLNTRGI------------NNLGLIAAS-----------LSARIAY 123 (307)
T ss_pred HHHHHHHHHhcCC------------CceEEEEEC-----------HHHHHHH
Confidence 5667777765321 368999999 8888754
No 23
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=87.60 E-value=0.51 Score=46.24 Aligned_cols=74 Identities=23% Similarity=0.376 Sum_probs=48.2
Q ss_pred CcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCCCCChHHHHHHH---------HHHHHHHHHHHHhcCCCC
Q 017327 91 PRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNVTFDHANAANQV---------YERFNSCLDYVLSTGLPD 161 (373)
Q Consensus 91 P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~tFDH~~iA~ev---------~~~F~~~~~~L~~~g~~~ 161 (373)
|+|+|..+=|. .=-...|.+|.+.|+.+||.|++. ||-...++- +..|...++.+.+.-..
T Consensus 33 ~~g~Vvl~HG~---~Eh~~ry~~la~~l~~~G~~V~~~------D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~- 102 (298)
T COG2267 33 PKGVVVLVHGL---GEHSGRYEELADDLAARGFDVYAL------DLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAE- 102 (298)
T ss_pred CCcEEEEecCc---hHHHHHHHHHHHHHHhCCCEEEEe------cCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhc-
Confidence 44888777663 234567999999999999999874 444433332 55555555555543110
Q ss_pred CCCCCCCCCCCCeeeecCC
Q 017327 162 ANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 162 ~gl~~~~~~~lPv~gVGHS 180 (373)
...++|+|-+|||
T Consensus 103 ------~~~~~p~~l~gHS 115 (298)
T COG2267 103 ------PDPGLPVFLLGHS 115 (298)
T ss_pred ------cCCCCCeEEEEeC
Confidence 0245899999999
No 24
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=86.17 E-value=1.4 Score=46.01 Aligned_cols=82 Identities=18% Similarity=0.234 Sum_probs=48.8
Q ss_pred cEEEEeeccc-cccccchhhHHHHHHHHHhCCcEE----EEecCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 017327 92 RAIIKFLGGA-FIGAVPEVTYSYLKELLAKEGFLV----ISVPYNVTFDHANAANQVYERFNSCLDYVLSTGLPDANLTP 166 (373)
Q Consensus 92 ~gVIhFiGGA-fvGa~PqitYr~LLE~La~~Gy~V----iAtPy~~tFDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~ 166 (373)
.+| ++|-=. +++....-.|..+++.|.+.||.+ .+-||... +.....+..+++...++.+.+.
T Consensus 91 ~~i-~~ldp~~~~~~~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR--~~~~~~~~~~~Lk~lIe~~~~~--------- 158 (440)
T PLN02733 91 YAI-DILDPDVIIRLDEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFR--QSNRLPETMDGLKKKLETVYKA--------- 158 (440)
T ss_pred eee-EEecCccccCcchHHHHHHHHHHHHHcCCccCCCcccCCCCcc--ccccHHHHHHHHHHHHHHHHHH---------
Confidence 344 554332 234445578999999999999985 45566532 2111123334444445444432
Q ss_pred CCCCCCCeeeecCCCCcCccchhhhhhhhhhh
Q 017327 167 DDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQ 198 (373)
Q Consensus 167 ~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~ 198 (373)
....|++.|||| ||+.+.+
T Consensus 159 --~g~~kV~LVGHS-----------MGGlva~ 177 (440)
T PLN02733 159 --SGGKKVNIISHS-----------MGGLLVK 177 (440)
T ss_pred --cCCCCEEEEEEC-----------HhHHHHH
Confidence 122599999999 8887764
No 25
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=85.25 E-value=5.9 Score=37.61 Aligned_cols=42 Identities=17% Similarity=0.301 Sum_probs=30.3
Q ss_pred CCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCC
Q 017327 86 LNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNV 132 (373)
Q Consensus 86 p~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~ 132 (373)
|++.+| .|-||=|++-.+ -.|..+.+.|.++||.||+..+.-
T Consensus 14 ~~~~~p--~vvliHG~~~~~---~~w~~~~~~L~~~g~~vi~~dl~g 55 (273)
T PLN02211 14 PNRQPP--HFVLIHGISGGS---WCWYKIRCLMENSGYKVTCIDLKS 55 (273)
T ss_pred ccCCCC--eEEEECCCCCCc---CcHHHHHHHHHhCCCEEEEecccC
Confidence 444444 466777755433 378999999999999999987753
No 26
>PLN02965 Probable pheophorbidase
Probab=85.00 E-value=5.8 Score=36.47 Aligned_cols=37 Identities=30% Similarity=0.387 Sum_probs=28.0
Q ss_pred CcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecC
Q 017327 91 PRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPY 130 (373)
Q Consensus 91 P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy 130 (373)
|...|=||=|++.. .-.|+.+++.|+++||.|||.-+
T Consensus 2 ~~~~vvllHG~~~~---~~~w~~~~~~L~~~~~~via~Dl 38 (255)
T PLN02965 2 PEIHFVFVHGASHG---AWCWYKLATLLDAAGFKSTCVDL 38 (255)
T ss_pred CceEEEEECCCCCC---cCcHHHHHHHHhhCCceEEEecC
Confidence 33446677777643 34689999999999999999976
No 27
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=83.63 E-value=6 Score=37.94 Aligned_cols=83 Identities=16% Similarity=0.275 Sum_probs=53.4
Q ss_pred CCCcEEEEeeccccccccchhhHHHHHHHHH-hCCcEEEEecCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 017327 89 KKPRAIIKFLGGAFIGAVPEVTYSYLKELLA-KEGFLVISVPYNVTFDHANAANQVYERFNSCLDYVLSTGLPDANLTPD 167 (373)
Q Consensus 89 ~~P~gVIhFiGGAfvGa~PqitYr~LLE~La-~~Gy~ViAtPy~~tFDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~ 167 (373)
.....||++=||.|+.-.+.-. ..++..++ ..|+.|++.=|...=.| .....+.+-+ ++++.+.+... ++|
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~-~~~~~~~~~~~g~~vv~vdYrlaPe~-~~p~~~~d~~-~a~~~l~~~~~-~~g---- 148 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTH-DALVARLAAAAGAVVVSVDYRLAPEH-PFPAALEDAY-AAYRWLRANAA-ELG---- 148 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhh-HHHHHHHHHHcCCEEEecCCCCCCCC-CCCchHHHHH-HHHHHHHhhhH-hhC----
Confidence 3457899999999998877654 66777775 67999999988876655 2222222222 24444444321 222
Q ss_pred CCCCCCeeeecCC
Q 017327 168 DLVNLPIYSVGHR 180 (373)
Q Consensus 168 ~~~~lPv~gVGHS 180 (373)
.+.-.|...|||
T Consensus 149 -~dp~~i~v~GdS 160 (312)
T COG0657 149 -IDPSRIAVAGDS 160 (312)
T ss_pred -CCccceEEEecC
Confidence 233478999999
No 28
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=83.38 E-value=5.6 Score=44.81 Aligned_cols=34 Identities=15% Similarity=0.137 Sum_probs=26.4
Q ss_pred EEEeeccccccccchhhHHHHHHHHHhCCcEEEEecC
Q 017327 94 IIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPY 130 (373)
Q Consensus 94 VIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy 130 (373)
+|.|+=|..=.. -.|+.+.+.|+++||.||+.=+
T Consensus 451 ~VVllHG~~g~~---~~~~~lA~~La~~Gy~VIaiDl 484 (792)
T TIGR03502 451 VVIYQHGITGAK---ENALAFAGTLAAAGVATIAIDH 484 (792)
T ss_pred EEEEeCCCCCCH---HHHHHHHHHHHhCCcEEEEeCC
Confidence 666776654332 3789999999999999999866
No 29
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=83.02 E-value=3.7 Score=33.55 Aligned_cols=61 Identities=26% Similarity=0.398 Sum_probs=39.6
Q ss_pred hHHHHHHHHHhCCcEEEEecC--CCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCccc
Q 017327 110 TYSYLKELLAKEGFLVISVPY--NVTFDHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAVP 187 (373)
Q Consensus 110 tYr~LLE~La~~Gy~ViAtPy--~~tFDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP 187 (373)
.|..+.+.|+++||.|+..=| ...-++..-+.++++..+ .. . ...-+++-+|||
T Consensus 14 ~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~-------~~-~---------~~~~~i~l~G~S------- 69 (145)
T PF12695_consen 14 DYQPLAEALAEQGYAVVAFDYPGHGDSDGADAVERVLADIR-------AG-Y---------PDPDRIILIGHS------- 69 (145)
T ss_dssp HHHHHHHHHHHTTEEEEEESCTTSTTSHHSHHHHHHHHHHH-------HH-H---------CTCCEEEEEEET-------
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCCccchhHHHHHHHHHHH-------hh-c---------CCCCcEEEEEEc-------
Confidence 489999999999999998844 334433343333333332 11 0 122589999999
Q ss_pred hhhhhhhhhhh
Q 017327 188 YFEQLGPLVNQ 198 (373)
Q Consensus 188 ~f~~LGckl~~ 198 (373)
+|..+..
T Consensus 70 ----~Gg~~a~ 76 (145)
T PF12695_consen 70 ----MGGAIAA 76 (145)
T ss_dssp ----HHHHHHH
T ss_pred ----cCcHHHH
Confidence 8887654
No 30
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=82.55 E-value=4.3 Score=39.76 Aligned_cols=59 Identities=17% Similarity=0.140 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCcEEEEecCCC-CC--ChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCC
Q 017327 111 YSYLKELLAKEGFLVISVPYNV-TF--DHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 111 Yr~LLE~La~~Gy~ViAtPy~~-tF--DH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS 180 (373)
++.+.+.|+++||.|++.-|.. +. .+..+.+-+......+++.+.+.. ..-+++.+|||
T Consensus 83 ~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~-----------~~~~i~lvGhS 144 (350)
T TIGR01836 83 DRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTS-----------KLDQISLLGIC 144 (350)
T ss_pred CchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHh-----------CCCcccEEEEC
Confidence 3789999999999999986643 11 122223333333556677776541 11478999999
No 31
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=81.85 E-value=5.9 Score=33.87 Aligned_cols=33 Identities=24% Similarity=0.421 Sum_probs=23.8
Q ss_pred EEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 95 IKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 95 IhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
|-|+-|.. . ..-.|+.+.+.|+ +||.|++.-+.
T Consensus 4 vv~~hG~~--~-~~~~~~~~~~~L~-~~~~v~~~d~~ 36 (251)
T TIGR03695 4 LVFLHGFL--G-SGADWQALIELLG-PHFRCLAIDLP 36 (251)
T ss_pred EEEEcCCC--C-chhhHHHHHHHhc-ccCeEEEEcCC
Confidence 45555642 2 2337999999999 89999998664
No 32
>PRK10985 putative hydrolase; Provisional
Probab=81.36 E-value=5.9 Score=38.46 Aligned_cols=56 Identities=20% Similarity=0.192 Sum_probs=35.3
Q ss_pred hHHHHHHHHHhCCcEEEEecCCCCC---------ChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCC
Q 017327 110 TYSYLKELLAKEGFLVISVPYNVTF---------DHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 110 tYr~LLE~La~~Gy~ViAtPy~~tF---------DH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS 180 (373)
.++.+.+.|.++||.|++.-|.--- .|.. ..+....+++.+.+. ....|++.||||
T Consensus 75 ~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~----~~~D~~~~i~~l~~~-----------~~~~~~~~vG~S 139 (324)
T PRK10985 75 YAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG----ETEDARFFLRWLQRE-----------FGHVPTAAVGYS 139 (324)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCC----chHHHHHHHHHHHHh-----------CCCCCEEEEEec
Confidence 3467899999999999998775210 1111 123444555556543 112489999999
No 33
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=80.21 E-value=18 Score=31.06 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=23.6
Q ss_pred EEEEeeccccccccchhhHHHHHHHHHhCCcEEEEec
Q 017327 93 AIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVP 129 (373)
Q Consensus 93 gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtP 129 (373)
-+|-|++|. |.. .-.|+.+++.|. +||.|++.=
T Consensus 14 ~~li~~hg~--~~~-~~~~~~~~~~l~-~~~~v~~~d 46 (251)
T TIGR02427 14 PVLVFINSL--GTD-LRMWDPVLPALT-PDFRVLRYD 46 (251)
T ss_pred CeEEEEcCc--ccc-hhhHHHHHHHhh-cccEEEEec
Confidence 366788884 433 346788999886 589999863
No 34
>PRK10673 acyl-CoA esterase; Provisional
Probab=79.84 E-value=13 Score=33.36 Aligned_cols=45 Identities=16% Similarity=0.156 Sum_probs=29.6
Q ss_pred eCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 83 IPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 83 l~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
..+|++...+-.|-||-|. .+. .-.|..+++.|++ +|.||++-+.
T Consensus 7 ~~~~~~~~~~~~iv~lhG~-~~~--~~~~~~~~~~l~~-~~~vi~~D~~ 51 (255)
T PRK10673 7 AQTAQNPHNNSPIVLVHGL-FGS--LDNLGVLARDLVN-DHDIIQVDMR 51 (255)
T ss_pred eccCCCCCCCCCEEEECCC-CCc--hhHHHHHHHHHhh-CCeEEEECCC
Confidence 3334443334457788785 232 2479999999975 6999998664
No 35
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=78.54 E-value=12 Score=31.40 Aligned_cols=22 Identities=32% Similarity=0.461 Sum_probs=18.4
Q ss_pred hhHHHHHHHHHhCCcEEEEecCC
Q 017327 109 VTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 109 itYr~LLE~La~~Gy~ViAtPy~ 131 (373)
-.|+.+.+.|+ +||.|++.=+.
T Consensus 12 ~~~~~~~~~l~-~~~~v~~~d~~ 33 (228)
T PF12697_consen 12 ESWDPLAEALA-RGYRVIAFDLP 33 (228)
T ss_dssp GGGHHHHHHHH-TTSEEEEEECT
T ss_pred HHHHHHHHHHh-CCCEEEEEecC
Confidence 67888999995 89999998554
No 36
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=76.17 E-value=7.2 Score=42.92 Aligned_cols=78 Identities=23% Similarity=0.326 Sum_probs=46.3
Q ss_pred cEEEEeeccccccccchhhHHHHHHHHHhCCc---EEEEecCCCC--CChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 017327 92 RAIIKFLGGAFIGAVPEVTYSYLKELLAKEGF---LVISVPYNVT--FDHANAANQVYERFNSCLDYVLSTGLPDANLTP 166 (373)
Q Consensus 92 ~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy---~ViAtPy~~t--FDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~ 166 (373)
.++=.|+.|-| .+..|+|.|++.|| .+.+.||..- +.....-++-..++....+.+.+.
T Consensus 146 ~AvD~f~pgY~-------vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~--------- 209 (642)
T PLN02517 146 VAADYFAPGYF-------VWAVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVAT--------- 209 (642)
T ss_pred heehhccccce-------eHHHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHH---------
Confidence 34445666654 45889999999998 5888899863 222222233333333333333221
Q ss_pred CCCCCCCeeeecCCCCcCccchhhhhhhhhhh
Q 017327 167 DDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQ 198 (373)
Q Consensus 167 ~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~ 198 (373)
-..-+|+.|||| ||+.+.+
T Consensus 210 --nggkKVVLV~HS-----------MGglv~l 228 (642)
T PLN02517 210 --NGGKKVVVVPHS-----------MGVLYFL 228 (642)
T ss_pred --cCCCeEEEEEeC-----------CchHHHH
Confidence 113589999999 8876553
No 37
>PRK10115 protease 2; Provisional
Probab=73.41 E-value=82 Score=34.75 Aligned_cols=202 Identities=13% Similarity=0.139 Sum_probs=106.6
Q ss_pred eEeccEEEeCCCC--CCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCCCCCh----HHHHH-----HH
Q 017327 75 QRLGSCLIIPPLN--GKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNVTFDH----ANAAN-----QV 143 (373)
Q Consensus 75 ~~~~~~~vl~Pp~--~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~tFDH----~~iA~-----ev 143 (373)
.+|..|++.+|+. ..++=.|++--||--....|...+.+ ..|+++||+|+..=|.=+-.+ ....+ ..
T Consensus 427 ~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~--~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~ 504 (686)
T PRK10115 427 VEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSR--LSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNT 504 (686)
T ss_pred CEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHH--HHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCc
Confidence 5566677776631 22334677777876665567655554 579999999988877654222 22111 23
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhhhhhhhccccccchhHHHhhhccchhHHHH
Q 017327 144 YERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQMMPIVEASPVYSMARNASGDAWKLL 223 (373)
Q Consensus 144 ~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~L~p~~~asp~~~~~R~a~~~~~k~l 223 (373)
++.|-.|.+.|.++|. ...--+...|-| -|..|...+ +.+ ..+.|+..
T Consensus 505 ~~D~~a~~~~Lv~~g~---------~d~~rl~i~G~S-----------~GG~l~~~~----------~~~--~Pdlf~A~ 552 (686)
T PRK10115 505 FNDYLDACDALLKLGY---------GSPSLCYGMGGS-----------AGGMLMGVA----------INQ--RPELFHGV 552 (686)
T ss_pred HHHHHHHHHHHHHcCC---------CChHHeEEEEEC-----------HHHHHHHHH----------Hhc--ChhheeEE
Confidence 5677789999988765 222345677888 566654311 000 00111111
Q ss_pred hhhhhccCCCCchHHHHhhHHHH--hhhhhhhhhhcCCcccccCChHHHHHHHHhc---ccc-----ccceeEEecCCC-
Q 017327 224 LNTAEALIPGSDMESLVSLNNFV--DQLPSVFGQVTEGISEFKPTPSENLDCFKKS---YNV-----QHTLLVKFSFDT- 292 (373)
Q Consensus 224 ~n~ag~l~~~~~~~i~~s~~nfv--dqLp~~~~~va~G~~EF~PsP~ET~~LI~~~---Y~v-----~rnLLIkF~dD~- 292 (373)
...+| +.-+..++ +++|.......... .|.-+|..+.++++ ..+ |-.|++.=.+|.
T Consensus 553 v~~vp----------~~D~~~~~~~~~~p~~~~~~~e~G---~p~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~R 619 (686)
T PRK10115 553 IAQVP----------FVDVVTTMLDESIPLTTGEFEEWG---NPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQ 619 (686)
T ss_pred EecCC----------chhHhhhcccCCCCCChhHHHHhC---CCCCHHHHHHHHHcCchhccCccCCCceeEEecCCCCC
Confidence 01011 11111222 34554333322211 35534455565532 222 445666888877
Q ss_pred --CCCcHHHHHHhchhhhccCCcee-EEeecCCCc
Q 017327 293 --IDQTDLLEETLKPRMESIGGTVE-KVQLNGNHI 324 (373)
Q Consensus 293 --IDqT~~L~~~L~~r~~s~~~~v~-~~~LpGnHL 324 (373)
.-|+..+.+.|+.+... ...+. +....++|-
T Consensus 620 V~~~~~~k~~a~Lr~~~~~-~~~vl~~~~~~~GHg 653 (686)
T PRK10115 620 VQYWEPAKWVAKLRELKTD-DHLLLLCTDMDSGHG 653 (686)
T ss_pred cCchHHHHHHHHHHhcCCC-CceEEEEecCCCCCC
Confidence 67888899999986211 11122 223468997
No 38
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=70.54 E-value=18 Score=34.94 Aligned_cols=61 Identities=11% Similarity=0.197 Sum_probs=43.2
Q ss_pred hHHHHHHHHHhC---CcEEEEecCCC------------CCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCe
Q 017327 110 TYSYLKELLAKE---GFLVISVPYNV------------TFDHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPI 174 (373)
Q Consensus 110 tYr~LLE~La~~---Gy~ViAtPy~~------------tFDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv 174 (373)
+|.-||+.|.++ .|.|.+..+.- .-+-..+.++|..+.+- ++.+.... ...+.++
T Consensus 17 fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~-i~~~~~~~---------~~~~~~l 86 (266)
T PF10230_consen 17 FYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDF-IKELIPQK---------NKPNVKL 86 (266)
T ss_pred HHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHH-HHHHhhhh---------cCCCCcE
Confidence 599999999955 78999987661 23456788888888774 44443321 0245799
Q ss_pred eeecCC
Q 017327 175 YSVGHR 180 (373)
Q Consensus 175 ~gVGHS 180 (373)
+-+|||
T Consensus 87 iLiGHS 92 (266)
T PF10230_consen 87 ILIGHS 92 (266)
T ss_pred EEEeCc
Confidence 999999
No 39
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=70.07 E-value=27 Score=35.49 Aligned_cols=81 Identities=23% Similarity=0.416 Sum_probs=56.0
Q ss_pred cEEEEeecccc-ccccchhhHHHHHHHHHhC-CcEEEEecCCCCCChHHH--HHHHHHHHHHHHHH-HHhcCCCCCCCCC
Q 017327 92 RAIIKFLGGAF-IGAVPEVTYSYLKELLAKE-GFLVISVPYNVTFDHANA--ANQVYERFNSCLDY-VLSTGLPDANLTP 166 (373)
Q Consensus 92 ~gVIhFiGGAf-vGa~PqitYr~LLE~La~~-Gy~ViAtPy~~tFDH~~i--A~ev~~~F~~~~~~-L~~~g~~~~gl~~ 166 (373)
..||.|=||.| +|++..-+|..|+.+++++ +-+||++=|...=.|--- =+.+|....-++.. +.+.|.
T Consensus 91 p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~------- 163 (336)
T KOG1515|consen 91 PVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLGA------- 163 (336)
T ss_pred eEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhCC-------
Confidence 57888988888 5788999999999999755 999999999875444322 23444444444443 444333
Q ss_pred CCCCCCCeeeecCCCC
Q 017327 167 DDLVNLPIYSVGHRPA 182 (373)
Q Consensus 167 ~~~~~lPv~gVGHS~a 182 (373)
|... +|..|=|.|
T Consensus 164 -D~~r--v~l~GDSaG 176 (336)
T KOG1515|consen 164 -DPSR--VFLAGDSAG 176 (336)
T ss_pred -Cccc--EEEEccCcc
Confidence 3333 899999854
No 40
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=69.61 E-value=14 Score=33.54 Aligned_cols=40 Identities=8% Similarity=-0.034 Sum_probs=21.2
Q ss_pred hHHHHHHHHhcc-----ccccceeEEecCCC---CCCcHHHHHHhchh
Q 017327 267 PSENLDCFKKSY-----NVQHTLLVKFSFDT---IDQTDLLEETLKPR 306 (373)
Q Consensus 267 P~ET~~LI~~~Y-----~v~rnLLIkF~dD~---IDqT~~L~~~L~~r 306 (373)
+.+-.++++..+ ..+..+++.=++|. ++....+.+.|+.-
T Consensus 150 ~~~~~~~~~~~~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~~~ 197 (212)
T TIGR01840 150 AASVCRLVRGMQSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAMLKV 197 (212)
T ss_pred HHHHHHHHhccCCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHHHh
Confidence 444455554321 23444555556666 35556677777664
No 41
>PLN02511 hydrolase
Probab=69.07 E-value=19 Score=36.37 Aligned_cols=55 Identities=15% Similarity=0.184 Sum_probs=35.0
Q ss_pred HHHHHHHHHhCCcEEEEecCCC---------CCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCC
Q 017327 111 YSYLKELLAKEGFLVISVPYNV---------TFDHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 111 Yr~LLE~La~~Gy~ViAtPy~~---------tFDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS 180 (373)
++.+...+.++||.||+.=+.- .+.|...+++ .+.+++.|... ....|++.||||
T Consensus 118 ~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~D----l~~~i~~l~~~-----------~~~~~~~lvG~S 181 (388)
T PLN02511 118 VRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGD----LRQVVDHVAGR-----------YPSANLYAAGWS 181 (388)
T ss_pred HHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHH----HHHHHHHHHHH-----------CCCCCEEEEEec
Confidence 3678888889999999985532 2333333333 34455555542 122589999999
No 42
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=69.02 E-value=25 Score=31.64 Aligned_cols=34 Identities=26% Similarity=0.414 Sum_probs=24.6
Q ss_pred EEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 94 IIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 94 VIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
+|-|+-|. |.. .-.|+.+.+.|++ +|.||+.-+.
T Consensus 30 ~vv~~hG~--~~~-~~~~~~~~~~l~~-~~~vi~~D~~ 63 (278)
T TIGR03056 30 LLLLLHGT--GAS-THSWRDLMPPLAR-SFRVVAPDLP 63 (278)
T ss_pred eEEEEcCC--CCC-HHHHHHHHHHHhh-CcEEEeecCC
Confidence 57777774 222 4468899999976 5999998665
No 43
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=68.84 E-value=21 Score=31.61 Aligned_cols=41 Identities=27% Similarity=0.267 Sum_probs=23.8
Q ss_pred cceeEEecCCCCCCcHHHHHHhchhhhccCCceeEEeec-CCCcccCC
Q 017327 282 HTLLVKFSFDTIDQTDLLEETLKPRMESIGGTVEKVQLN-GNHITPCI 328 (373)
Q Consensus 282 rnLLIkF~dD~IDqT~~L~~~L~~r~~s~~~~v~~~~Lp-GnHLTPl~ 328 (373)
.+++|.=++|.+. ....+.+... ++ ..+...++ ++|.....
T Consensus 233 P~lii~G~~D~~~--~~~~~~~~~~---~~-~~~~~~~~~~gH~~~~e 274 (288)
T TIGR01250 233 PTLLTVGEFDTMT--PEAAREMQEL---IA-GSRLVVFPDGSHMTMIE 274 (288)
T ss_pred CEEEEecCCCccC--HHHHHHHHHh---cc-CCeEEEeCCCCCCcccC
Confidence 3567777777663 3444444443 22 34566776 78987654
No 44
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=67.94 E-value=12 Score=33.50 Aligned_cols=70 Identities=16% Similarity=0.271 Sum_probs=46.0
Q ss_pred HHHHHHHHHhCCcEEEEecCCCCCChHH---------HHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCC
Q 017327 111 YSYLKELLAKEGFLVISVPYNVTFDHAN---------AANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRP 181 (373)
Q Consensus 111 Yr~LLE~La~~Gy~ViAtPy~~tFDH~~---------iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~ 181 (373)
|++-.+-|+++||+|+..=|.-+-.+-. ......+....+++.|.+.+. ++.--|..+|||
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~---------iD~~ri~i~G~S- 72 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYY---------IDPDRIGIMGHS- 72 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTS---------EEEEEEEEEEET-
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcccc---------ccceeEEEEccc-
Confidence 5577888999999999999997654222 223445556678888877532 333457899999
Q ss_pred CcCccchhhhhhhhhhhhc
Q 017327 182 ATEAVPYFEQLGPLVNQMM 200 (373)
Q Consensus 182 a~~AvP~f~~LGckl~~L~ 200 (373)
.|.-+..++
T Consensus 73 ----------~GG~~a~~~ 81 (213)
T PF00326_consen 73 ----------YGGYLALLA 81 (213)
T ss_dssp ----------HHHHHHHHH
T ss_pred ----------ccccccchh
Confidence 887766544
No 45
>PRK00870 haloalkane dehalogenase; Provisional
Probab=66.64 E-value=23 Score=33.42 Aligned_cols=23 Identities=26% Similarity=0.285 Sum_probs=19.5
Q ss_pred hhHHHHHHHHHhCCcEEEEecCC
Q 017327 109 VTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 109 itYr~LLE~La~~Gy~ViAtPy~ 131 (373)
-.|+.+++.|+++||.|||.=+.
T Consensus 60 ~~w~~~~~~L~~~gy~vi~~Dl~ 82 (302)
T PRK00870 60 YLYRKMIPILAAAGHRVIAPDLI 82 (302)
T ss_pred hhHHHHHHHHHhCCCEEEEECCC
Confidence 46899999999999999998543
No 46
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=62.14 E-value=18 Score=35.44 Aligned_cols=65 Identities=14% Similarity=0.168 Sum_probs=41.8
Q ss_pred HHHHHHHhCCcEEEEecCCC---CC-ChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCcc
Q 017327 113 YLKELLAKEGFLVISVPYNV---TF-DHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAV 186 (373)
Q Consensus 113 ~LLE~La~~Gy~ViAtPy~~---tF-DH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~Av 186 (373)
.+|+.+.++||+|+++=|.= .| +....|..++..-+.+++.....| + ..+-+++.+|||.|.-|-
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~g-----l----~~~~~v~l~GySqGG~Aa 85 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLG-----L----SPSSRVALWGYSQGGQAA 85 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccC-----C----CCCCCEEEEeeCccHHHH
Confidence 46788889999999997631 23 556777777766553332221112 2 234689999999775543
No 47
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=61.15 E-value=70 Score=28.83 Aligned_cols=96 Identities=22% Similarity=0.277 Sum_probs=53.6
Q ss_pred EEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCCCC----ChHHHHH------------HH
Q 017327 80 CLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNVTF----DHANAAN------------QV 143 (373)
Q Consensus 80 ~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~tF----DH~~iA~------------ev 143 (373)
.++..|.++ .|+..|=+|=++| |-. -.++.+-.+|+++||+|++-=+=.+- .....+. ++
T Consensus 3 ay~~~P~~~-~~~~~Vvv~~d~~-G~~--~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (218)
T PF01738_consen 3 AYVARPEGG-GPRPAVVVIHDIF-GLN--PNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQV 78 (218)
T ss_dssp EEEEEETTS-SSEEEEEEE-BTT-BS---HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHH
T ss_pred EEEEeCCCC-CCCCEEEEEcCCC-CCc--hHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHH
Confidence 455555444 4443333333332 333 56789999999999999998442221 2222222 33
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhhhhhhh
Q 017327 144 YERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQM 199 (373)
Q Consensus 144 ~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~L 199 (373)
.++...+++.|.+... ...-.+..+|.+ +|.++...
T Consensus 79 ~~~~~aa~~~l~~~~~---------~~~~kig~vGfc-----------~GG~~a~~ 114 (218)
T PF01738_consen 79 AADLQAAVDYLRAQPE---------VDPGKIGVVGFC-----------WGGKLALL 114 (218)
T ss_dssp HHHHHHHHHHHHCTTT---------CEEEEEEEEEET-----------HHHHHHHH
T ss_pred HHHHHHHHHHHHhccc---------cCCCcEEEEEEe-----------cchHHhhh
Confidence 3444556777765421 233578889999 88887753
No 48
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=58.89 E-value=21 Score=38.48 Aligned_cols=78 Identities=18% Similarity=0.271 Sum_probs=46.7
Q ss_pred CCCcEEEE-eecccccc-ccchhhHHHHHHHHHhCCcEEEEecCCC-CCChH--HHHHHHHHHHHHHHHHHHhcCCCCCC
Q 017327 89 KKPRAIIK-FLGGAFIG-AVPEVTYSYLKELLAKEGFLVISVPYNV-TFDHA--NAANQVYERFNSCLDYVLSTGLPDAN 163 (373)
Q Consensus 89 ~~P~gVIh-FiGGAfvG-a~PqitYr~LLE~La~~Gy~ViAtPy~~-tFDH~--~iA~ev~~~F~~~~~~L~~~g~~~~g 163 (373)
+.|.=+|| .|.+.|+= -.| .+.|.+.|.++||.|+++-+.. +..|. ...+-+.+....+++.+.+. .|
T Consensus 188 ~~PlLiVp~~i~k~yilDL~p---~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~----~g 260 (532)
T TIGR01838 188 KTPLLIVPPWINKYYILDLRP---QNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAI----TG 260 (532)
T ss_pred CCcEEEECcccccceeeeccc---chHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHh----cC
Confidence 45665665 23333332 123 3789999999999998887764 43332 22334444455667676642 11
Q ss_pred CCCCCCCCCCeeeecCC
Q 017327 164 LTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 164 l~~~~~~~lPv~gVGHS 180 (373)
.-++..||||
T Consensus 261 -------~~kv~lvG~c 270 (532)
T TIGR01838 261 -------EKQVNCVGYC 270 (532)
T ss_pred -------CCCeEEEEEC
Confidence 1368999999
No 49
>PF07515 DUF1528: Protein of unknown function (DUF1528); InterPro: IPR011093 This entry contains proteins some of which are from pathogenic strains of Gammaproteobacteria. Though the function of these proteins is unknown, they could be involved in pathogenesis. This domain is found at the C terminus of proteins that contain a N-terminal metal-dependent phosphohydrolase (HD) region and are considered to be helicases/relaxases. ; PDB: 2IPQ_X 3KQ5_A.
Probab=58.12 E-value=6.5 Score=33.63 Aligned_cols=28 Identities=21% Similarity=0.437 Sum_probs=24.4
Q ss_pred CCcEEEEeeccccccccchhhHHHHHHH
Q 017327 90 KPRAIIKFLGGAFIGAVPEVTYSYLKEL 117 (373)
Q Consensus 90 ~P~gVIhFiGGAfvGa~PqitYr~LLE~ 117 (373)
.++|.||++-|..|=.+|.|+|+|+-|.
T Consensus 5 ~~~A~VH~V~~~vfLvsP~IF~~y~~e~ 32 (106)
T PF07515_consen 5 DPKAKVHIVAGGVFLVSPGIFQRYAQEH 32 (106)
T ss_dssp STT-SEEEETTEEEEETTCHHHHHHHH-
T ss_pred CCCCeEEEECCEEEEECHHHHHHHHHhc
Confidence 5789999999999999999999999876
No 50
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=55.13 E-value=29 Score=37.18 Aligned_cols=66 Identities=15% Similarity=0.298 Sum_probs=42.9
Q ss_pred hHHHHHHHHHhCCcE----EEEecCCC--CCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCc
Q 017327 110 TYSYLKELLAKEGFL----VISVPYNV--TFDHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPAT 183 (373)
Q Consensus 110 tYr~LLE~La~~Gy~----ViAtPy~~--tFDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~ 183 (373)
....++|.|+.-||. +++.||.. +|--....++-+.++..-++...+. -..-|++.|+||
T Consensus 125 ~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~-----------~G~kkVvlisHS--- 190 (473)
T KOG2369|consen 125 YWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKL-----------NGGKKVVLISHS--- 190 (473)
T ss_pred HHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHH-----------cCCCceEEEecC---
Confidence 346789999988885 99999986 4433444555555554444333322 112599999999
Q ss_pred Cccchhhhhhhhhh
Q 017327 184 EAVPYFEQLGPLVN 197 (373)
Q Consensus 184 ~AvP~f~~LGckl~ 197 (373)
||+.+-
T Consensus 191 --------MG~l~~ 196 (473)
T KOG2369|consen 191 --------MGGLYV 196 (473)
T ss_pred --------CccHHH
Confidence 877754
No 51
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=53.92 E-value=96 Score=29.40 Aligned_cols=41 Identities=22% Similarity=0.409 Sum_probs=28.2
Q ss_pred ccceeEEec-CCC-CCC---cHHHHHHhchhhhccCCceeEEeecC-CCcc
Q 017327 281 QHTLLVKFS-FDT-IDQ---TDLLEETLKPRMESIGGTVEKVQLNG-NHIT 325 (373)
Q Consensus 281 ~rnLLIkF~-dD~-IDq---T~~L~~~L~~r~~s~~~~v~~~~LpG-nHLT 325 (373)
.-.++|-.. +|. +++ +..+.+.|+.. +..+++...|| +|--
T Consensus 211 ~~plli~~G~~D~~v~~~~~~~~~~~~l~~~----g~~v~~~~~~g~~H~f 257 (275)
T TIGR02821 211 HSTILIDQGTADQFLDEQLRPDAFEQACRAA----GQALTLRRQAGYDHSY 257 (275)
T ss_pred CCCeeEeecCCCcccCccccHHHHHHHHHHc----CCCeEEEEeCCCCccc
Confidence 445666565 553 454 46799999874 35688899998 9953
No 52
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=53.77 E-value=29 Score=32.22 Aligned_cols=37 Identities=22% Similarity=0.195 Sum_probs=26.3
Q ss_pred CCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 88 GKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 88 ~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
+..|.=+||=+||.. -.|+.+++.|.+ +|.||+.=+.
T Consensus 24 ~~~plvllHG~~~~~------~~w~~~~~~L~~-~~~vi~~Dl~ 60 (276)
T TIGR02240 24 GLTPLLIFNGIGANL------ELVFPFIEALDP-DLEVIAFDVP 60 (276)
T ss_pred CCCcEEEEeCCCcch------HHHHHHHHHhcc-CceEEEECCC
Confidence 345777777555443 267889999875 6999998665
No 53
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=52.58 E-value=1.9e+02 Score=30.81 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=26.4
Q ss_pred cceeEEecCCCCCCcHHHHHHhchhhhccCCceeEEeec-CCCcccCC
Q 017327 282 HTLLVKFSFDTIDQTDLLEETLKPRMESIGGTVEKVQLN-GNHITPCI 328 (373)
Q Consensus 282 rnLLIkF~dD~IDqT~~L~~~L~~r~~s~~~~v~~~~Lp-GnHLTPl~ 328 (373)
.+|+|-=++|.+= .....+.+..+ ++ ..++..++ .+|..++.
T Consensus 420 PtLII~Ge~D~iv-P~~~~~~la~~---iP-~a~l~vI~~aGH~~~v~ 462 (481)
T PLN03087 420 DVAIFHGGDDELI-PVECSYAVKAK---VP-RARVKVIDDKDHITIVV 462 (481)
T ss_pred CEEEEEECCCCCC-CHHHHHHHHHh---CC-CCEEEEeCCCCCcchhh
Confidence 3677766666654 44455555555 33 35678888 59998864
No 54
>COG5423 Predicted metal-binding protein [Function unknown]
Probab=50.48 E-value=27 Score=32.41 Aligned_cols=91 Identities=22% Similarity=0.298 Sum_probs=54.2
Q ss_pred ccCChHHHHHHHHhccccccceeEEecCCCCCCcHH----HHHHhchhhhcc-CCc-eeEEeecCCCc--ccCCCCCCCC
Q 017327 263 FKPTPSENLDCFKKSYNVQHTLLVKFSFDTIDQTDL----LEETLKPRMESI-GGT-VEKVQLNGNHI--TPCIQEPKWQ 334 (373)
Q Consensus 263 F~PsP~ET~~LI~~~Y~v~rnLLIkF~dD~IDqT~~----L~~~L~~r~~s~-~~~-v~~~~LpGnHL--TPl~qd~~~~ 334 (373)
..||-+|.+++++.| ++-|||+|+-|+-+.-++ |...|.---+.+ .|. ..+...||+-- .-|+.+-=..
T Consensus 54 hvps~~EfreilkeY---r~alL~kfk~dt~~~eeE~k~~~~~mlelEke~freGf~fA~al~pGsC~lCe~Cn~ekC~~ 130 (167)
T COG5423 54 HVPSIEEFREILKEY---RRALLVKFKIDTSEDEEEKKRSLRKMLELEKELFREGFIFAHALFPGSCNLCEECNLEKCVK 130 (167)
T ss_pred CCCCHHHHHHHHHHH---hhhheEEEecCchhhHHHHHHHHHHHHHHHHHHhccCceEEEEecCCCchhhhhcCcccccC
Confidence 479999999999986 578999999999877763 333333221212 122 44566677531 2233330000
Q ss_pred CCCcCChHHHHHHHHHHhHHHH
Q 017327 335 VGYIYTPADAIAQGLKTLSLNE 356 (373)
Q Consensus 335 ~G~~~tP~Dai~q~lk~~~~~d 356 (373)
.--.=-|.+||+=-+++.+-++
T Consensus 131 pem~R~s~~AvgInlss~~ek~ 152 (167)
T COG5423 131 PEMVRPSPEAVGINLSSLAEKA 152 (167)
T ss_pred cccccCChHHheecHHHHHHHH
Confidence 1112234599988888877766
No 55
>PF15466 DUF4635: Domain of unknown function (DUF4635)
Probab=49.67 E-value=32 Score=30.77 Aligned_cols=54 Identities=19% Similarity=0.174 Sum_probs=39.4
Q ss_pred EeecCCCcccCCCCCCCCCCCcCChHHHHHHHHHHhHH----------HHHHHHHHHHHhhhcCC
Q 017327 317 VQLNGNHITPCIQEPKWQVGYIYTPADAIAQGLKTLSL----------NEIRILSKTISGWFGRF 371 (373)
Q Consensus 317 ~~LpGnHLTPl~qd~~~~~G~~~tP~Dai~q~lk~~~~----------~d~~~L~~~i~~W~~~~ 371 (373)
-.-+-||+|+-+++..-. -...-|.-+|..|||..+- +++.+|++-+-.||+.+
T Consensus 61 CN~~QN~v~sqg~EyQt~-epseEPik~~r~WLkenLhvflEkLE~EvreLEQlV~DLE~WLDal 124 (135)
T PF15466_consen 61 CNYYQNPVASQGFEYQTK-EPSEEPIKAIRNWLKENLHVFLEKLEKEVRELEQLVRDLEEWLDAL 124 (135)
T ss_pred cCCcCCcccccccccccC-CCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345577887766654322 2346799999999998764 77888889999999864
No 56
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=49.53 E-value=61 Score=28.84 Aligned_cols=32 Identities=16% Similarity=0.239 Sum_probs=22.0
Q ss_pred EEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 95 IKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 95 IhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
|-||=|.-- ....|+.+.+.| ++|.||+.=+.
T Consensus 5 vvllHG~~~---~~~~w~~~~~~l--~~~~vi~~D~~ 36 (242)
T PRK11126 5 LVFLHGLLG---SGQDWQPVGEAL--PDYPRLYIDLP 36 (242)
T ss_pred EEEECCCCC---ChHHHHHHHHHc--CCCCEEEecCC
Confidence 555555422 225889999988 37999998654
No 57
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=49.05 E-value=1.8e+02 Score=25.30 Aligned_cols=34 Identities=15% Similarity=0.290 Sum_probs=21.0
Q ss_pred EEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 94 IIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 94 VIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
+|=|+=|. +... -.|..+++.|. +||.||+.-+.
T Consensus 15 ~iv~lhG~--~~~~-~~~~~~~~~l~-~~~~vi~~D~~ 48 (257)
T TIGR03611 15 VVVLSSGL--GGSG-SYWAPQLDVLT-QRFHVVTYDHR 48 (257)
T ss_pred EEEEEcCC--Ccch-hHHHHHHHHHH-hccEEEEEcCC
Confidence 34455553 2222 35777777776 47999999664
No 58
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.53 E-value=36 Score=37.76 Aligned_cols=56 Identities=23% Similarity=0.364 Sum_probs=41.8
Q ss_pred CcEEEEecCCCCCChHHH-------HHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhh
Q 017327 122 GFLVISVPYNVTFDHANA-------ANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGP 194 (373)
Q Consensus 122 Gy~ViAtPy~~tFDH~~i-------A~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGc 194 (373)
+..||+.=|....-||.- =+.+..+-+.-+++|+..|. -.+-|+.||||| ||.
T Consensus 478 ~~Rii~l~Y~Tsit~w~~~~p~e~~r~sl~~Rs~~lleql~~~~V---------G~~RPivwI~HS-----------mGG 537 (697)
T KOG2029|consen 478 KSRIIGLEYTTSITDWRARCPAEAHRRSLAARSNELLEQLQAAGV---------GDDRPIVWIGHS-----------MGG 537 (697)
T ss_pred cceEEEeecccchhhhcccCcccchhhHHHHHHHHHHHHHHHhcc---------CCCCceEEEecc-----------cch
Confidence 588999999988777765 44555666677777877654 125799999999 888
Q ss_pred hhh
Q 017327 195 LVN 197 (373)
Q Consensus 195 kl~ 197 (373)
+|.
T Consensus 538 Ll~ 540 (697)
T KOG2029|consen 538 LLA 540 (697)
T ss_pred HHH
Confidence 766
No 59
>COG4138 BtuD ABC-type cobalamin transport system, ATPase component [Coenzyme metabolism]
Probab=46.37 E-value=57 Score=31.69 Aligned_cols=71 Identities=17% Similarity=0.337 Sum_probs=47.8
Q ss_pred CcccceEec---cEEEeCCCCCCCCcEEEEeeccccc--cccchhhHHHHHHHHHhCCcEEEEecCCCCCChH-HHHHHH
Q 017327 70 NNKIYQRLG---SCLIIPPLNGKKPRAIIKFLGGAFI--GAVPEVTYSYLKELLAKEGFLVISVPYNVTFDHA-NAANQV 143 (373)
Q Consensus 70 ~~~~w~~~~---~~~vl~Pp~~~~P~gVIhFiGGAfv--Ga~PqitYr~LLE~La~~Gy~ViAtPy~~tFDH~-~iA~ev 143 (373)
++..|+|+- .|.-++| ..+|.|-.-.+---+- --+-+..-.+||+.++.+|.+||--.- +++|. .-|+++
T Consensus 127 SGGEWQRVRLAav~LQv~P--d~NP~~~LLllDEP~~~LDvAQ~~aLdrll~~~c~~G~~vims~H--DLNhTLrhA~~~ 202 (248)
T COG4138 127 SGGEWQRVRLAAVVLQITP--DANPAGQLLLLDEPMNSLDVAQQSALDRLLSALCQQGLAIVMSSH--DLNHTLRHAHRA 202 (248)
T ss_pred CcccceeeEEeEEEEEecC--CCCccceeEEecCCCcchhHHHHHHHHHHHHHHHhCCcEEEEecc--chhhHHHHHHHH
Confidence 578999974 5666777 3456665555544332 336688899999999999999887643 34442 346666
Q ss_pred H
Q 017327 144 Y 144 (373)
Q Consensus 144 ~ 144 (373)
|
T Consensus 203 w 203 (248)
T COG4138 203 W 203 (248)
T ss_pred H
Confidence 5
No 60
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=44.71 E-value=1.2e+02 Score=30.78 Aligned_cols=89 Identities=22% Similarity=0.270 Sum_probs=54.3
Q ss_pred CCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecC-----CCCCChHHHHHHHHHHHHHHHHHHHhcCC
Q 017327 85 PLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPY-----NVTFDHANAANQVYERFNSCLDYVLSTGL 159 (373)
Q Consensus 85 Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy-----~~tFDH~~iA~ev~~~F~~~~~~L~~~g~ 159 (373)
.|...-.-=||-|+=|.++= .=.|..||.-++-.||.|||-=. ..+-|-...|-+|-+-...-+..++..+.
T Consensus 39 tP~~~G~yPVilF~HG~~l~---ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V 115 (307)
T PF07224_consen 39 TPSEAGTYPVILFLHGFNLY---NSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQHVLPENV 115 (307)
T ss_pred cCCcCCCccEEEEeechhhh---hHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhhhCCCCc
Confidence 34433444578888898887 67899999999999999999521 12344445555555554444444432211
Q ss_pred CCCCCCCCCCCCCCeeeecCCCCcC
Q 017327 160 PDANLTPDDLVNLPIYSVGHRPATE 184 (373)
Q Consensus 160 ~~~gl~~~~~~~lPv~gVGHS~a~~ 184 (373)
+.+.. -+--+|||-+.+
T Consensus 116 ------~~nl~--klal~GHSrGGk 132 (307)
T PF07224_consen 116 ------EANLS--KLALSGHSRGGK 132 (307)
T ss_pred ------ccccc--eEEEeecCCccH
Confidence 11222 445789985543
No 61
>PLN02578 hydrolase
Probab=42.92 E-value=94 Score=30.57 Aligned_cols=36 Identities=22% Similarity=0.288 Sum_probs=25.4
Q ss_pred CCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 89 KKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 89 ~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
+.|.=+||=.|+. .-.|+++++.|++ +|.|+|.=+.
T Consensus 86 g~~vvliHG~~~~------~~~w~~~~~~l~~-~~~v~~~D~~ 121 (354)
T PLN02578 86 GLPIVLIHGFGAS------AFHWRYNIPELAK-KYKVYALDLL 121 (354)
T ss_pred CCeEEEECCCCCC------HHHHHHHHHHHhc-CCEEEEECCC
Confidence 4577777744442 3667888999975 5999998554
No 62
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=42.11 E-value=98 Score=30.63 Aligned_cols=22 Identities=18% Similarity=0.197 Sum_probs=17.6
Q ss_pred hhHHHHHHHHHhCCcEEEEecCC
Q 017327 109 VTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 109 itYr~LLE~La~~Gy~ViAtPy~ 131 (373)
-.|+.+++.|++ +|.||+.=+.
T Consensus 102 ~~w~~~~~~L~~-~~~via~Dl~ 123 (360)
T PLN02679 102 PHWRRNIGVLAK-NYTVYAIDLL 123 (360)
T ss_pred HHHHHHHHHHhc-CCEEEEECCC
Confidence 478889999976 7999997444
No 63
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=41.52 E-value=71 Score=31.59 Aligned_cols=109 Identities=17% Similarity=0.324 Sum_probs=64.0
Q ss_pred HHHHHHHhCCcE--EEEec-CCCCCChHHHHHHHH-------------------HHHHHHHHHHHhcCCCCCCCCCCCCC
Q 017327 113 YLKELLAKEGFL--VISVP-YNVTFDHANAANQVY-------------------ERFNSCLDYVLSTGLPDANLTPDDLV 170 (373)
Q Consensus 113 ~LLE~La~~Gy~--ViAtP-y~~tFDH~~iA~ev~-------------------~~F~~~~~~L~~~g~~~~gl~~~~~~ 170 (373)
.-|.+|+++||- +|-+- ..+|-.+..+-++|. +.|+.|++++... .|.. -.
T Consensus 64 ~aL~klk~~gy~eviiQ~lhiIpG~EyEklvr~V~~~~~dF~~lkig~PlLy~k~DYe~~v~aik~~-~ppl------~k 136 (265)
T COG4822 64 QALNKLKDQGYEEVIIQPLHIIPGIEYEKLVREVNKYSNDFKRLKIGRPLLYYKNDYEICVEAIKDQ-IPPL------NK 136 (265)
T ss_pred HHHHHHHHccchheeeeeeeecCchHHHHHHHHHHHHhhhhheeecCCceeechhhHHHHHHHHHHh-cCCc------Cc
Confidence 457889999993 33332 345777777777774 3566788888765 2221 12
Q ss_pred CCCeeeecCC--------------------------CCcCccchhhhh-------hhhhhhhccccc---cchhHHHhhh
Q 017327 171 NLPIYSVGHR--------------------------PATEAVPYFEQL-------GPLVNQMMPIVE---ASPVYSMARN 214 (373)
Q Consensus 171 ~lPv~gVGHS--------------------------~a~~AvP~f~~L-------Gckl~~L~p~~~---asp~~~~~R~ 214 (373)
+--++-+||- .+.++-|.++++ |-+=--|||++- .-..-+++-+
T Consensus 137 ~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP~~d~vi~~l~~~~~~~v~L~PlMlvAG~Ha~nDMasd 216 (265)
T COG4822 137 DEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGYPLVDTVIEYLRKNGIKEVHLIPLMLVAGDHAKNDMASD 216 (265)
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCCCcHHHHHHHHHHcCCceEEEeeeEEeechhhhhhhccc
Confidence 3446789991 124555666643 211123556552 1222345432
Q ss_pred ccchhHHHHhhhhhc
Q 017327 215 ASGDAWKLLLNTAEA 229 (373)
Q Consensus 215 a~~~~~k~l~n~ag~ 229 (373)
+++.||.+++.+|-
T Consensus 217 -dedswk~il~~~G~ 230 (265)
T COG4822 217 -DEDSWKNILEKNGF 230 (265)
T ss_pred -chHHHHHHHHhCCc
Confidence 57889999998883
No 64
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=41.10 E-value=48 Score=33.57 Aligned_cols=65 Identities=20% Similarity=0.175 Sum_probs=44.9
Q ss_pred CcEEEEeecccccc-ccchhhHHHHHHHHHhCCc--EEEEecCCCCCChHHHHHHHHHHHHHHHHHHHhcC
Q 017327 91 PRAIIKFLGGAFIG-AVPEVTYSYLKELLAKEGF--LVISVPYNVTFDHANAANQVYERFNSCLDYVLSTG 158 (373)
Q Consensus 91 P~gVIhFiGGAfvG-a~PqitYr~LLE~La~~Gy--~ViAtPy~~tFDH~~iA~ev~~~F~~~~~~L~~~g 158 (373)
.+.=||||=|-.=| +-=-+|++..||.|++.|. .||.|||.+.=.+-.- +.++++.-++.|++-|
T Consensus 233 ~I~~~~wLD~Gh~g~~~~w~T~~~~L~~l~~~~i~i~vH~TPyQv~D~~Rpw---I~~E~~~F~~~L~~~~ 300 (303)
T PF10561_consen 233 RISDMYWLDGGHNGGSNTWITDENVLKELAKLGIRIHVHVTPYQVSDPMRPW---IGKEEKKFVKLLKKLG 300 (303)
T ss_pred hhheEEEeccCCCCCCCceecCHHHHHHHHhcCcEEEEecCcccccCCCCcH---HHHHHHHHHHHHHHhC
Confidence 46678888877774 4556899999999999986 5889999997655332 2334444444554433
No 65
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=38.78 E-value=3.1e+02 Score=27.89 Aligned_cols=35 Identities=23% Similarity=0.226 Sum_probs=22.1
Q ss_pred EEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 93 AIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 93 gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
..|=||-|. |.. .-.|...++.|++ +|.|++.-+.
T Consensus 106 p~vvllHG~--~~~-~~~~~~~~~~L~~-~~~vi~~D~r 140 (402)
T PLN02894 106 PTLVMVHGY--GAS-QGFFFRNFDALAS-RFRVIAIDQL 140 (402)
T ss_pred CEEEEECCC--Ccc-hhHHHHHHHHHHh-CCEEEEECCC
Confidence 345566663 332 2345566788876 5999998665
No 66
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=38.68 E-value=78 Score=30.33 Aligned_cols=22 Identities=18% Similarity=0.156 Sum_probs=16.5
Q ss_pred hhHHHHHHHHHhCCcEEEEecCC
Q 017327 109 VTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 109 itYr~LLE~La~~Gy~ViAtPy~ 131 (373)
-.|+.+.+.|.+. |.|++.=+.
T Consensus 145 ~~~~~~~~~l~~~-~~v~~~d~~ 166 (371)
T PRK14875 145 NNWLFNHAALAAG-RPVIALDLP 166 (371)
T ss_pred chHHHHHHHHhcC-CEEEEEcCC
Confidence 3577888888765 999997543
No 67
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=38.39 E-value=1e+02 Score=26.38 Aligned_cols=26 Identities=23% Similarity=0.259 Sum_probs=18.6
Q ss_pred cccchhhHHHHHHHHHhCCcEEEEecCC
Q 017327 104 GAVPEVTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 104 Ga~PqitYr~LLE~La~~Gy~ViAtPy~ 131 (373)
|... -.|+.+.+.|++ +|.||+.=+.
T Consensus 14 ~~~~-~~~~~~~~~l~~-~~~vi~~d~~ 39 (245)
T TIGR01738 14 GMNA-EVFRCLDEELSA-HFTLHLVDLP 39 (245)
T ss_pred CCch-hhHHHHHHhhcc-CeEEEEecCC
Confidence 4443 368899999975 6999987543
No 68
>PLN02872 triacylglycerol lipase
Probab=36.45 E-value=80 Score=32.52 Aligned_cols=19 Identities=32% Similarity=0.218 Sum_probs=14.6
Q ss_pred HHHHHHHHhCCcEEEEecC
Q 017327 112 SYLKELLAKEGFLVISVPY 130 (373)
Q Consensus 112 r~LLE~La~~Gy~ViAtPy 130 (373)
+.|-..|+++||.|++.=.
T Consensus 97 ~sla~~La~~GydV~l~n~ 115 (395)
T PLN02872 97 QSLGFILADHGFDVWVGNV 115 (395)
T ss_pred cchHHHHHhCCCCcccccc
Confidence 4466678999999987644
No 69
>PF13377 Peripla_BP_3: Periplasmic binding protein-like domain; PDB: 3K9C_B 3BIL_B 3JVD_B 1ZAY_A 1VPW_A 1DBQ_A 2PUA_A 1QQA_A 1PNR_A 1JHZ_A ....
Probab=35.74 E-value=2.6e+02 Score=23.27 Aligned_cols=78 Identities=15% Similarity=0.194 Sum_probs=51.4
Q ss_pred EeeccccccccchhhHHHHHHHHHhCCcEEEEecCCCCCChHHHHHHHHHHHH----------------HHHHHHHhcCC
Q 017327 96 KFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNVTFDHANAANQVYERFN----------------SCLDYVLSTGL 159 (373)
Q Consensus 96 hFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~tFDH~~iA~ev~~~F~----------------~~~~~L~~~g~ 159 (373)
-|||+.--....+.-+..|.+.+.+.|.......+....++..........++ ..+..|.+.|.
T Consensus 13 ~~i~~~~~~~~~~~r~~gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~pdaii~~~~~~a~~~~~~l~~~g~ 92 (160)
T PF13377_consen 13 AFIGGPPNSSVSRERLEGFREALKEHGIEFEELIFFSDDDSEDAREAQLLWLRRLRPDAIICSNDRLALGVLRALRELGI 92 (160)
T ss_dssp EEEESSTTSHHHHHHHHHHHHHHHHTTSEEEGEEEEESSSHHHHHHHHHHHHHTCSSSEEEESSHHHHHHHHHHHHHTTS
T ss_pred EEEecCCCChhHHHHHHHHHHHHHHCCCCCCeeEeecCCcchhHHHHHHHHHhcCCCcEEEEcCHHHHHHHHHHHHHcCC
Confidence 35665555566777788899999999998777777666665544433322111 25566666554
Q ss_pred CCCCCCCCCCCCCCeeeecCC
Q 017327 160 PDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 160 ~~~gl~~~~~~~lPv~gVGHS 180 (373)
. -.+++.+++++++
T Consensus 93 -----~--vP~di~vv~~~~~ 106 (160)
T PF13377_consen 93 -----R--VPQDISVVSFDDS 106 (160)
T ss_dssp -----C--TTTTSEEEEESSS
T ss_pred -----c--ccccccEEEecCc
Confidence 1 2567899999997
No 70
>KOG2800 consensus Conserved developmentally regulated protein [General function prediction only]
Probab=35.10 E-value=70 Score=33.12 Aligned_cols=63 Identities=16% Similarity=0.231 Sum_probs=47.3
Q ss_pred cEEEEeecccccc-ccchhhHHHHHHHHHhCCc--EEEEecCCCCCChHHHHHHHHHHHHHHHHHH
Q 017327 92 RAIIKFLGGAFIG-AVPEVTYSYLKELLAKEGF--LVISVPYNVTFDHANAANQVYERFNSCLDYV 154 (373)
Q Consensus 92 ~gVIhFiGGAfvG-a~PqitYr~LLE~La~~Gy--~ViAtPy~~tFDH~~iA~ev~~~F~~~~~~L 154 (373)
+--+|+|-|--=| +--=|||+.+||++++.|. .|+-|||.+-=+--.--++=.++|-+.+++|
T Consensus 294 Is~mywlDgGh~g~sntwIT~~~vlq~~sq~gl~IhiH~TPyQv~D~~R~WIrKE~k~fv~lL~~l 359 (389)
T KOG2800|consen 294 ISEMYWLDGGHNGQSNTWITDHNVLQRISQDGLRIHIHGTPYQVCDELRGWIRKEKKEFVRLLKAL 359 (389)
T ss_pred hhheeEeecccCCCCCceeccHHHHHHHhhcceEEEEecCcchhcchhhhhhhHhHHHHHHHHHHh
Confidence 3457777666555 6778999999999999997 5678999997666555566667777666555
No 71
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=33.98 E-value=4e+02 Score=26.49 Aligned_cols=85 Identities=19% Similarity=0.296 Sum_probs=57.1
Q ss_pred eCCCCCCCCcEEEEeeccccccc-cchhhHHHHHHHHHhCCcEEEEe--cCCC-----C---------------------
Q 017327 83 IPPLNGKKPRAIIKFLGGAFIGA-VPEVTYSYLKELLAKEGFLVISV--PYNV-----T--------------------- 133 (373)
Q Consensus 83 l~Pp~~~~P~gVIhFiGGAfvGa-~PqitYr~LLE~La~~Gy~ViAt--Py~~-----t--------------------- 133 (373)
..|-.+++++|+|=.|.|..--+ .|. .=..|=..|.+.||+.++. |... .
T Consensus 78 ~~~~~~~~~~G~vIilp~~g~~~d~p~-~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~ 156 (310)
T PF12048_consen 78 WRPANSAKPQGAVIILPDWGEHPDWPG-LIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSD 156 (310)
T ss_pred EecccCCCCceEEEEecCCCCCCCcHh-HHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCC
Confidence 33455889999999999987655 344 3467788899999988775 4311 0
Q ss_pred ----------CChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCC
Q 017327 134 ----------FDHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 134 ----------FDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS 180 (373)
-........+..+++.+...+...|. -+++.|||.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~------------~~ivlIg~G 201 (310)
T PF12048_consen 157 EPSPASAQEAEAREAYEERLFARIEAAIAFAQQQGG------------KNIVLIGHG 201 (310)
T ss_pred CCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcCC------------ceEEEEEeC
Confidence 11334455666677766666665432 358999997
No 72
>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=33.74 E-value=39 Score=38.75 Aligned_cols=53 Identities=25% Similarity=0.337 Sum_probs=41.8
Q ss_pred cEEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHH-hCCcEEEEecCCCCCChHHHHHHH
Q 017327 79 SCLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLA-KEGFLVISVPYNVTFDHANAANQV 143 (373)
Q Consensus 79 ~~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La-~~Gy~ViAtPy~~tFDH~~iA~ev 143 (373)
-+.++||| ++.|..| +|-|| +.|+--.|=+-. -+||-|. |.+|+||..||-++
T Consensus 35 f~I~~PPP---NVTG~LH-mGHAl-----~~tl~D~l~RykRM~G~~vl---~~pG~DhAGIaTq~ 88 (877)
T COG0525 35 FSIDTPPP---NVTGSLH-MGHAL-----NYTLQDILARYKRMRGYNVL---WPPGTDHAGIATQV 88 (877)
T ss_pred cEEeCCCC---CCCCccc-chhhh-----hHHHHHHHHHHHHcCCCeee---cCCCCCCCCchHHH
Confidence 58899997 8899998 45555 677777777765 4599987 77899999999876
No 73
>PLN02442 S-formylglutathione hydrolase
Probab=33.67 E-value=2.4e+02 Score=27.08 Aligned_cols=40 Identities=25% Similarity=0.317 Sum_probs=26.3
Q ss_pred ccceeEEe-cCCCC-C---CcHHHHHHhchhhhccCCceeEEeecC-CCc
Q 017327 281 QHTLLVKF-SFDTI-D---QTDLLEETLKPRMESIGGTVEKVQLNG-NHI 324 (373)
Q Consensus 281 ~rnLLIkF-~dD~I-D---qT~~L~~~L~~r~~s~~~~v~~~~LpG-nHL 324 (373)
...+||-- ++|.+ . ++..+.+.|+.. +..++...+|| +|-
T Consensus 217 ~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~----g~~~~~~~~pg~~H~ 262 (283)
T PLN02442 217 SATILIDQGEADKFLKEQLLPENFEEACKEA----GAPVTLRLQPGYDHS 262 (283)
T ss_pred CCCEEEEECCCCccccccccHHHHHHHHHHc----CCCeEEEEeCCCCcc
Confidence 33444444 55544 2 356788888874 45688999998 994
No 74
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=32.96 E-value=1.2e+02 Score=30.68 Aligned_cols=83 Identities=19% Similarity=0.283 Sum_probs=44.5
Q ss_pred CcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCC---CCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCC
Q 017327 91 PRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNV---TFDHANAANQVYERFNSCLDYVLSTGLPDANLTPD 167 (373)
Q Consensus 91 P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~---tFDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~ 167 (373)
..-+|=||||--=|=.--=....|-+.|.+.||.|+-.=... +|-...+.+.+ ++...|++.|+.... |
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~-~eI~~~v~ylr~~~~---g---- 103 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDV-EEIAQLVEYLRSEKG---G---- 103 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHH-HHHHHHHHHHHHHS---------
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHH-HHHHHHHHHHHHhhc---c----
Confidence 455677999975332222234567788877899988774443 66677777776 344679999987610 0
Q ss_pred CCCCCCeeeecCCC
Q 017327 168 DLVNLPIYSVGHRP 181 (373)
Q Consensus 168 ~~~~lPv~gVGHS~ 181 (373)
....--|+-+|||-
T Consensus 104 ~~~~~kIVLmGHST 117 (303)
T PF08538_consen 104 HFGREKIVLMGHST 117 (303)
T ss_dssp ----S-EEEEEECC
T ss_pred ccCCccEEEEecCC
Confidence 01224789999993
No 75
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=32.23 E-value=4.5e+02 Score=24.97 Aligned_cols=100 Identities=21% Similarity=0.266 Sum_probs=60.5
Q ss_pred eEeccEEEeCCCCCCCC-cEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecC----CCCCC------hHHHH---
Q 017327 75 QRLGSCLIIPPLNGKKP-RAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPY----NVTFD------HANAA--- 140 (373)
Q Consensus 75 ~~~~~~~vl~Pp~~~~P-~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy----~~tFD------H~~iA--- 140 (373)
.++..-+..|...+..| .=|||=|.|- .| .++.+-++||++||+|++-=+ ...++ +....
T Consensus 12 ~~~~~~~a~P~~~~~~P~VIv~hei~Gl----~~--~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~ 85 (236)
T COG0412 12 GELPAYLARPAGAGGFPGVIVLHEIFGL----NP--HIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVE 85 (236)
T ss_pred ceEeEEEecCCcCCCCCEEEEEecccCC----ch--HHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhc
Confidence 45555555543323323 3345655554 34 789999999999999987511 11111 22221
Q ss_pred ----HHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCCcCccchhhhhhhhhhhhc
Q 017327 141 ----NQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPATEAVPYFEQLGPLVNQMM 200 (373)
Q Consensus 141 ----~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a~~AvP~f~~LGckl~~L~ 200 (373)
.+++...+.+++.|..... ...--|..+|=+ +|-++..++
T Consensus 86 ~~~~~~~~~d~~a~~~~L~~~~~---------~~~~~ig~~GfC-----------~GG~~a~~~ 129 (236)
T COG0412 86 RVDPAEVLADIDAALDYLARQPQ---------VDPKRIGVVGFC-----------MGGGLALLA 129 (236)
T ss_pred cCCHHHHHHHHHHHHHHHHhCCC---------CCCceEEEEEEc-----------ccHHHHHHh
Confidence 4667777788888876421 223457888999 888877654
No 76
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=31.65 E-value=1.5e+02 Score=23.48 Aligned_cols=45 Identities=18% Similarity=0.201 Sum_probs=34.7
Q ss_pred cchhhHHHHHHHHHhCCc-EEEEecCCCCCChHHHHHHHHHHHHHHHHH
Q 017327 106 VPEVTYSYLKELLAKEGF-LVISVPYNVTFDHANAANQVYERFNSCLDY 153 (373)
Q Consensus 106 ~PqitYr~LLE~La~~Gy-~ViAtPy~~tFDH~~iA~ev~~~F~~~~~~ 153 (373)
.|.+ ...|+.|.++|+ .|+..|+-+. ++.....++...++..+..
T Consensus 44 ~P~i--~~~l~~l~~~g~~~vvvvPl~~~-~g~h~~~di~~~~~~~~~~ 89 (101)
T cd03409 44 GPDT--EEAIRELAEEGYQRVVIVPLAPV-SGDEVFYDIDSEIGLVRKQ 89 (101)
T ss_pred CCCH--HHHHHHHHHcCCCeEEEEeCccc-cChhhHHHHHHHHHHHHHh
Confidence 6664 478999999998 6999999988 8877777777776655543
No 77
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=31.02 E-value=1.1e+02 Score=26.86 Aligned_cols=38 Identities=29% Similarity=0.335 Sum_probs=31.5
Q ss_pred HHHHHHHHhCCc-EEEEecCCCCCChHHHHHHHHHHHHH
Q 017327 112 SYLKELLAKEGF-LVISVPYNVTFDHANAANQVYERFNS 149 (373)
Q Consensus 112 r~LLE~La~~Gy-~ViAtPy~~tFDH~~iA~ev~~~F~~ 149 (373)
..-|+.|+++|+ .|+..|+.+..||..+=.++-..++.
T Consensus 80 ~~~l~~l~~~G~~~i~v~p~gF~~D~~Etl~di~~e~~~ 118 (135)
T cd00419 80 DDALEELAKEGVKNVVVVPIGFVSDHLETLYELDIEYRE 118 (135)
T ss_pred HHHHHHHHHcCCCeEEEECCccccccHHHHHHHHHHHHH
Confidence 457888999998 69999999999999988877666554
No 78
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=30.61 E-value=2.5e+02 Score=27.06 Aligned_cols=72 Identities=24% Similarity=0.287 Sum_probs=39.3
Q ss_pred hhhHHHHHHHHH-hCCcEEEEecCCCC-CChHHHH----HHHHHHHHHHHHHHHhc-CCCCCCCCCCCCCCCCeeeecCC
Q 017327 108 EVTYSYLKELLA-KEGFLVISVPYNVT-FDHANAA----NQVYERFNSCLDYVLST-GLPDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 108 qitYr~LLE~La-~~Gy~ViAtPy~~t-FDH~~iA----~ev~~~F~~~~~~L~~~-g~~~~gl~~~~~~~lPv~gVGHS 180 (373)
...+..+.+.|. +.+|.||+.=|... ..+...| +.+-+.....++.|.+. |. ..-+++.||||
T Consensus 51 ~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~----------~~~~i~lIGhS 120 (275)
T cd00707 51 ESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGL----------SLENVHLIGHS 120 (275)
T ss_pred CcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCC----------ChHHEEEEEec
Confidence 345666666554 46899998865432 1111111 22223334445555443 11 11368999999
Q ss_pred CCcCccchhhhhhhhhhhhc
Q 017327 181 PATEAVPYFEQLGPLVNQMM 200 (373)
Q Consensus 181 ~a~~AvP~f~~LGckl~~L~ 200 (373)
||.-+...+
T Consensus 121 -----------lGa~vAg~~ 129 (275)
T cd00707 121 -----------LGAHVAGFA 129 (275)
T ss_pred -----------HHHHHHHHH
Confidence 888776544
No 79
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=30.13 E-value=38 Score=34.64 Aligned_cols=21 Identities=29% Similarity=0.529 Sum_probs=18.2
Q ss_pred hhhHHHHHHHHHhCCcEEEEe
Q 017327 108 EVTYSYLKELLAKEGFLVISV 128 (373)
Q Consensus 108 qitYr~LLE~La~~Gy~ViAt 128 (373)
.-+|..+++.||.+||+|+|.
T Consensus 113 R~~yS~~~~eLAS~GyVV~ai 133 (379)
T PF03403_consen 113 RTSYSAICGELASHGYVVAAI 133 (379)
T ss_dssp TTTTHHHHHHHHHTT-EEEEE
T ss_pred hhhHHHHHHHHHhCCeEEEEe
Confidence 456999999999999999997
No 80
>PF04110 APG12: Ubiquitin-like autophagy protein Apg12 ; InterPro: IPR007242 Macroautophagy is a bulk degradation process induced by starvation in eukaryotic cells. In yeast, 15 Apg proteins coordinate the formation of autophagosomes. No molecule involved in autophagy has yet been identified in higher eukaryotes []. The pre-autophagosomal structure contains at least five Apg proteins: Apg1p, Apg2p, Apg5p, Aut7p/Apg8p and Apg16p. It is found in the vacuole []. The C-terminal glycine of Apg12p is conjugated to a lysine residue of Apg5p via an isopeptide bond. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. Auotphagy protein 16 (Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate []. Autophagy protein 5 (Apg5) is directly required for the import of aminopeptidase I via the cytoplasm-to-vacuole targeting pathway []. This entry represents Apg12, which is covalently bound to Apg5 [].; GO: 0000045 autophagic vacuole assembly, 0005737 cytoplasm; PDB: 1WZ3_B.
Probab=29.40 E-value=24 Score=29.54 Aligned_cols=30 Identities=23% Similarity=0.549 Sum_probs=23.1
Q ss_pred ccccCChHHHHHHHHhccccccceeEEecC
Q 017327 261 SEFKPTPSENLDCFKKSYNVQHTLLVKFSF 290 (373)
Q Consensus 261 ~EF~PsP~ET~~LI~~~Y~v~rnLLIkF~d 290 (373)
.-|.|+|.|+-.-+-+.|.+.-.|+|.+..
T Consensus 53 ~sFaPspDe~vg~L~~~f~~~~~Liv~Ys~ 82 (87)
T PF04110_consen 53 NSFAPSPDETVGDLYRCFGTNGELIVSYSK 82 (87)
T ss_dssp EEE---TTSBHHHHHHHH-BTTBEEEEEES
T ss_pred CccCCCchhHHHHHHHHhCCCCEEEEEEec
Confidence 459999999999999999999999998854
No 81
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=28.27 E-value=1.1e+02 Score=32.34 Aligned_cols=91 Identities=14% Similarity=0.053 Sum_probs=45.4
Q ss_pred EeccEEEeCCCCCCCCcEEEEeeccccccccch-hhHHHHHHHHHhCCcEEEEecCCCC------CChHHHHHHHHHHHH
Q 017327 76 RLGSCLIIPPLNGKKPRAIIKFLGGAFIGAVPE-VTYSYLKELLAKEGFLVISVPYNVT------FDHANAANQVYERFN 148 (373)
Q Consensus 76 ~~~~~~vl~Pp~~~~P~gVIhFiGGAfvGa~Pq-itYr~LLE~La~~Gy~ViAtPy~~t------FDH~~iA~ev~~~F~ 148 (373)
++...+.+| .+..|..+|-++.|-.--.... ..+....+.|+++||+||+.=+.-. +++.. . ...+...
T Consensus 8 ~L~~~~~~P--~~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~-~-~~~~D~~ 83 (550)
T TIGR00976 8 RLAIDVYRP--AGGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLG-S-DEAADGY 83 (550)
T ss_pred EEEEEEEec--CCCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecC-c-ccchHHH
Confidence 454444443 2334555555555432111100 1111234678999999999855532 11111 1 1223334
Q ss_pred HHHHHHHhcCCCCCCCCCCCCCCCCeeeecCC
Q 017327 149 SCLDYVLSTGLPDANLTPDDLVNLPIYSVGHR 180 (373)
Q Consensus 149 ~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS 180 (373)
.+++.+.++.. .+-++..+|||
T Consensus 84 ~~i~~l~~q~~----------~~~~v~~~G~S 105 (550)
T TIGR00976 84 DLVDWIAKQPW----------CDGNVGMLGVS 105 (550)
T ss_pred HHHHHHHhCCC----------CCCcEEEEEeC
Confidence 56666655311 12488999999
No 82
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=27.77 E-value=1.1e+02 Score=25.37 Aligned_cols=57 Identities=25% Similarity=0.395 Sum_probs=41.4
Q ss_pred eeccccccccchhhHHHHHHHHHhCCcEEEEecCCCCCC----hHHHHHHHHHHHHHHHHHHHhc
Q 017327 97 FLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNVTFD----HANAANQVYERFNSCLDYVLST 157 (373)
Q Consensus 97 FiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~tFD----H~~iA~ev~~~F~~~~~~L~~~ 157 (373)
+|+|.||...-+-.+.++.+.|.+.|+.|. .|.....+ ....++++ |++.++.+.+.
T Consensus 2 YlAgp~F~~~~~~~~~~~~~~L~~~g~~v~-~P~~~~~~~~~~~~~~~~~i---~~~d~~~i~~~ 62 (113)
T PF05014_consen 2 YLAGPFFSEEQKARVERLREALEKNGFEVY-SPQDNDENDEEDSQEWAREI---FERDLEGIREC 62 (113)
T ss_dssp EEESGGSSHHHHHHHHHHHHHHHTTTTEEE-GGCTCSSS--TTSHHCHHHH---HHHHHHHHHHS
T ss_pred EEeCCcCCHHHHHHHHHHHHHHHhCCCEEE-eccccccccccccchHHHHH---HHHHHHHHHHC
Confidence 578888887888889999999999999544 78855443 44455444 56677777765
No 83
>cd02901 Macro_Poa1p_like Macro domain, Poa1p_like family. The macro domain is a high-affinity ADP-ribose binding module found in a variety of proteins as a stand-alone domain or in combination with other domains like in histone macroH2A and some PARPs (poly ADP-ribose polymerases). Some macro domains recognize poly ADP-ribose as a ligand. Previously identified as displaying an Appr-1"-p (ADP-ribose-1"-monophosphate) processing activity, the macro domain may play roles in distinct ADP-ribose pathways, such as the ADP-ribosylation of proteins, an important post-translational modification which occurs in DNA repair, transcription, chromatin biology, and long-term memory formation, among other processes. Members of this family show similarity to the yeast protein Poa1p, reported to be a phosphatase specific for Appr-1"-p, a tRNA splicing metabolite. Poa1p may play a role in tRNA splicing regulation.
Probab=27.45 E-value=3.7e+02 Score=22.87 Aligned_cols=70 Identities=14% Similarity=0.233 Sum_probs=47.2
Q ss_pred EeccEEEeCCCCCCCCcEEEEeeccccccccchhhHHHH-------HHHHHhCCcEEEEecCCC----CCChHHHHHHHH
Q 017327 76 RLGSCLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYL-------KELLAKEGFLVISVPYNV----TFDHANAANQVY 144 (373)
Q Consensus 76 ~~~~~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~L-------LE~La~~Gy~ViAtPy~~----tFDH~~iA~ev~ 144 (373)
.++++.++++......+-|||+++=-+-+ ++.+|..| ++...+++..-||.|-.- ++|...+++-+.
T Consensus 57 ~~G~~~~~~~~~~~~~~~I~~~~t~~~~~--~~~~~~~l~~~l~~~~~~a~~~~~~sva~P~iG~G~~G~~w~~v~~ii~ 134 (140)
T cd02901 57 LLGGVAVLERGSSLVSRYIYNLPTKVHYG--PKSRYEAIEKSLRELRAHARDNGIKSVAMPRIGCGLGGLDWEEVEPLIE 134 (140)
T ss_pred CCCcEEEEecCCCCCceEEEEeeccCCCC--CCCcHHHHHHHHHHHHHHHHHcCCCEEeeCCCCCcCCCCCHHHHHHHHH
Confidence 36777887764444468999999766666 45566554 444445789999999653 578777766665
Q ss_pred HHH
Q 017327 145 ERF 147 (373)
Q Consensus 145 ~~F 147 (373)
+.+
T Consensus 135 ~~~ 137 (140)
T cd02901 135 KAL 137 (140)
T ss_pred HHh
Confidence 544
No 84
>PRK05855 short chain dehydrogenase; Validated
Probab=26.76 E-value=1.9e+02 Score=29.55 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=24.3
Q ss_pred EEEeeccccccccchhhHHHHHHHHHhCCcEEEEecC
Q 017327 94 IIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPY 130 (373)
Q Consensus 94 VIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy 130 (373)
.|=|+-|..-. .-.|+.+++.| .+||.||+.=+
T Consensus 27 ~ivllHG~~~~---~~~w~~~~~~L-~~~~~Vi~~D~ 59 (582)
T PRK05855 27 TVVLVHGYPDN---HEVWDGVAPLL-ADRFRVVAYDV 59 (582)
T ss_pred eEEEEcCCCch---HHHHHHHHHHh-hcceEEEEecC
Confidence 56677776432 35689999999 67899999844
No 85
>PRK11071 esterase YqiA; Provisional
Probab=26.59 E-value=2.2e+02 Score=25.76 Aligned_cols=65 Identities=17% Similarity=0.171 Sum_probs=36.2
Q ss_pred ccccchhhHHHHH-HHHHhC--CcEEEEecCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecC
Q 017327 103 IGAVPEVTYSYLK-ELLAKE--GFLVISVPYNVTFDHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGH 179 (373)
Q Consensus 103 vGa~PqitYr~LL-E~La~~--Gy~ViAtPy~~tFDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGH 179 (373)
+++.++..+...+ +.|++. +|.|++.=.. + |- . .....+..+... .+ .-+++.|||
T Consensus 10 f~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~-g--~~---~----~~~~~l~~l~~~----~~-------~~~~~lvG~ 68 (190)
T PRK11071 10 FNSSPRSAKATLLKNWLAQHHPDIEMIVPQLP-P--YP---A----DAAELLESLVLE----HG-------GDPLGLVGS 68 (190)
T ss_pred CCCCcchHHHHHHHHHHHHhCCCCeEEeCCCC-C--CH---H----HHHHHHHHHHHH----cC-------CCCeEEEEE
Confidence 5667887775444 445543 7888765333 2 21 1 122233334332 11 127899999
Q ss_pred CCCcCccchhhhhhhhhhhh
Q 017327 180 RPATEAVPYFEQLGPLVNQM 199 (373)
Q Consensus 180 S~a~~AvP~f~~LGckl~~L 199 (373)
| ||+.+.+.
T Consensus 69 S-----------~Gg~~a~~ 77 (190)
T PRK11071 69 S-----------LGGYYATW 77 (190)
T ss_pred C-----------HHHHHHHH
Confidence 9 98887753
No 86
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=26.45 E-value=1.3e+02 Score=27.47 Aligned_cols=20 Identities=20% Similarity=0.152 Sum_probs=15.2
Q ss_pred HHHHHHHHHhCCcEEEEecC
Q 017327 111 YSYLKELLAKEGFLVISVPY 130 (373)
Q Consensus 111 Yr~LLE~La~~Gy~ViAtPy 130 (373)
|...++.|+++||.|||.=+
T Consensus 49 ~~~~~~~l~~~~~~vi~~D~ 68 (282)
T TIGR03343 49 YYRNIGPFVDAGYRVILKDS 68 (282)
T ss_pred HHHHHHHHHhCCCEEEEECC
Confidence 33456788889999999854
No 87
>COG0549 ArcC Carbamate kinase [Amino acid transport and metabolism]
Probab=25.06 E-value=84 Score=32.08 Aligned_cols=44 Identities=25% Similarity=0.388 Sum_probs=32.4
Q ss_pred CcccceEeccEEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEe-----cCCCCCCh
Q 017327 70 NNKIYQRLGSCLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISV-----PYNVTFDH 136 (373)
Q Consensus 70 ~~~~w~~~~~~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAt-----Py~~tFDH 136 (373)
++++|||+ ++.| +|+.||+ ...++.|.++|.+|||. |-.-+=+|
T Consensus 155 ~~rG~RRV-----VpSP---~P~~IvE---------------~~~Ik~L~~~g~vVI~~GGGGIPVv~~~~~ 203 (312)
T COG0549 155 AGRGYRRV-----VPSP---KPVRIVE---------------AEAIKALLESGHVVIAAGGGGIPVVEEGAG 203 (312)
T ss_pred CCCCeeEe-----cCCC---CCccchh---------------HHHHHHHHhCCCEEEEeCCCCcceEecCCC
Confidence 46678884 3334 8999987 46789999999999985 65554444
No 88
>PF10881 DUF2726: Protein of unknown function (DUF2726); InterPro: IPR024402 This domain found in bacterial proteins has no known function.
Probab=24.54 E-value=3.4e+02 Score=22.90 Aligned_cols=65 Identities=14% Similarity=0.216 Sum_probs=43.6
Q ss_pred cEEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHH-HhCCcEEEEecCCCCCChHHHHHHHHH
Q 017327 79 SCLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELL-AKEGFLVISVPYNVTFDHANAANQVYE 145 (373)
Q Consensus 79 ~~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~L-a~~Gy~ViAtPy~~tFDH~~iA~ev~~ 145 (373)
..++.- +...+|++||++=|..-- ..-+..=..+.+.+ .+.|..++=++-...-+-..+.+.+.+
T Consensus 59 DFvv~d-~~~~~p~~vIEld~~~h~-~~~~~~rD~~k~~~l~~agiplir~~~~~~~~~~~l~~~l~~ 124 (126)
T PF10881_consen 59 DFVVCD-KRDGRPVAVIELDGSSHD-QEKRQERDEFKDRVLKKAGIPLIRISPKDSYSVEELRRDLRE 124 (126)
T ss_pred cEEEEE-CCCCcEEEEEEecCcccc-chhhHHHHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHHHH
Confidence 345554 456689999999988533 22233334556666 566999999888877777777666543
No 89
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=24.42 E-value=68 Score=29.09 Aligned_cols=63 Identities=24% Similarity=0.401 Sum_probs=37.2
Q ss_pred ccccchhhHHHHHHHHHhCCcEEEEecCCCCCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCC
Q 017327 103 IGAVPEVTYSYLKELLAKEGFLVISVPYNVTFDHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPA 182 (373)
Q Consensus 103 vGa~PqitYr~LLE~La~~Gy~ViAtPy~~tFDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a 182 (373)
=|+-|+=.|.+|=++|.+. +.|-. | .+|+-.+ +++..++++-.. ..+-|++-||||
T Consensus 8 ~~s~~~HW~~wl~~~l~~~-~~V~~-~---~~~~P~~-----~~W~~~l~~~i~------------~~~~~~ilVaHS-- 63 (171)
T PF06821_consen 8 GGSPPDHWQPWLERQLENS-VRVEQ-P---DWDNPDL-----DEWVQALDQAID------------AIDEPTILVAHS-- 63 (171)
T ss_dssp TSSTTTSTHHHHHHHHTTS-EEEEE-C-----TS--H-----HHHHHHHHHCCH------------C-TTTEEEEEET--
T ss_pred CCCCccHHHHHHHHhCCCC-eEEec-c---ccCCCCH-----HHHHHHHHHHHh------------hcCCCeEEEEeC--
Confidence 3566788999999999888 54443 2 2244433 223333332211 123479999999
Q ss_pred cCccchhhhhhhhhhh
Q 017327 183 TEAVPYFEQLGPLVNQ 198 (373)
Q Consensus 183 ~~AvP~f~~LGckl~~ 198 (373)
|||..-+
T Consensus 64 ---------LGc~~~l 70 (171)
T PF06821_consen 64 ---------LGCLTAL 70 (171)
T ss_dssp ---------HHHHHHH
T ss_pred ---------HHHHHHH
Confidence 9998654
No 90
>COG1647 Esterase/lipase [General function prediction only]
Probab=24.34 E-value=7.2e+02 Score=24.77 Aligned_cols=73 Identities=19% Similarity=0.296 Sum_probs=50.5
Q ss_pred cccccchhhHHHHHHHHHhCCcEEEEecCCCCCChHH------HHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCee
Q 017327 102 FIGAVPEVTYSYLKELLAKEGFLVISVPYNVTFDHAN------AANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIY 175 (373)
Q Consensus 102 fvGa~PqitYr~LLE~La~~Gy~ViAtPy~~tFDH~~------iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~ 175 (373)
|-|+.=.+ |.|=+.|.++||+|.|=-|. |-.|.. -.+.=|++=..+++.|.+.|. --|+
T Consensus 24 FTGt~~Dv--r~Lgr~L~e~GyTv~aP~yp-GHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy------------~eI~ 88 (243)
T COG1647 24 FTGTPRDV--RMLGRYLNENGYTVYAPRYP-GHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGY------------DEIA 88 (243)
T ss_pred cCCCcHHH--HHHHHHHHHCCceEecCCCC-CCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCC------------CeEE
Confidence 66776665 67889999999999987665 222211 234445566678889887554 2568
Q ss_pred eecCCCCcCccchhhhhhhhhhhhc
Q 017327 176 SVGHRPATEAVPYFEQLGPLVNQMM 200 (373)
Q Consensus 176 gVGHS~a~~AvP~f~~LGckl~~L~ 200 (373)
.+|=| ||..+.+.+
T Consensus 89 v~GlS-----------mGGv~alkl 102 (243)
T COG1647 89 VVGLS-----------MGGVFALKL 102 (243)
T ss_pred EEeec-----------chhHHHHHH
Confidence 89999 888877644
No 91
>PRK00035 hemH ferrochelatase; Reviewed
Probab=24.17 E-value=1.1e+02 Score=30.35 Aligned_cols=36 Identities=25% Similarity=0.241 Sum_probs=28.1
Q ss_pred hHHHHHHHHHhCCc-EEEEecCCCCCChHHHHHHHHH
Q 017327 110 TYSYLKELLAKEGF-LVISVPYNVTFDHANAANQVYE 145 (373)
Q Consensus 110 tYr~LLE~La~~Gy-~ViAtPy~~tFDH~~iA~ev~~ 145 (373)
+-...|+.|+++|+ .|+..||-+.-||...-.++-.
T Consensus 249 ~~~~~l~~l~~~g~k~V~v~P~~Fv~D~lEtl~ei~~ 285 (333)
T PRK00035 249 YTDDTLEELAEKGVKKVVVVPPGFVSDHLETLEEIDI 285 (333)
T ss_pred CHHHHHHHHHHcCCCeEEEECCeeeccchhHHHHHHH
Confidence 34678999999998 6888999998899765555433
No 92
>PRK03592 haloalkane dehalogenase; Provisional
Probab=23.93 E-value=2.2e+02 Score=26.59 Aligned_cols=22 Identities=14% Similarity=0.061 Sum_probs=17.7
Q ss_pred hhHHHHHHHHHhCCcEEEEecCC
Q 017327 109 VTYSYLKELLAKEGFLVISVPYN 131 (373)
Q Consensus 109 itYr~LLE~La~~Gy~ViAtPy~ 131 (373)
-.|+.+.+.|++++ .|||.-..
T Consensus 41 ~~w~~~~~~L~~~~-~via~D~~ 62 (295)
T PRK03592 41 YLWRNIIPHLAGLG-RCLAPDLI 62 (295)
T ss_pred HHHHHHHHHHhhCC-EEEEEcCC
Confidence 47889999999987 89987543
No 93
>PRK09411 carbamate kinase; Reviewed
Probab=23.81 E-value=1e+02 Score=31.09 Aligned_cols=42 Identities=36% Similarity=0.484 Sum_probs=31.2
Q ss_pred cccceEeccEEEeCCCCCCCCcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEe-----cCCCCCC
Q 017327 71 NKIYQRLGSCLIIPPLNGKKPRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISV-----PYNVTFD 135 (373)
Q Consensus 71 ~~~w~~~~~~~vl~Pp~~~~P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAt-----Py~~tFD 135 (373)
++.|+|+ +|.| +|+.+|+ ...|+.|.++|+.||+. |-..++|
T Consensus 148 g~g~rrV-----VpSP---~P~~iVe---------------~~~I~~Ll~~G~IVI~~gGGGIPV~~~~~ 194 (297)
T PRK09411 148 GKYLRRV-----VASP---QPRKILD---------------SEAIELLLKEGHVVICSGGGGVPVTEDGA 194 (297)
T ss_pred CCceEEE-----ccCC---CCcceEC---------------HHHHHHHHHCCCEEEecCCCCCCeEEcCC
Confidence 4556653 3444 8999887 57899999999999997 7665554
No 94
>PF03969 AFG1_ATPase: AFG1-like ATPase; InterPro: IPR005654 ATPase family gene 1 (AFG1) ATPase is a 377 amino acid putative protein with an ATPase motif typical of the protein family including SEC18p PAS1, CDC48-VCP and TBP. AFG1 also has substantial homology to these proteins outside the ATPase domain []. This family of proteins contains a P-loop motif.; GO: 0005524 ATP binding
Probab=22.30 E-value=1.5e+02 Score=30.45 Aligned_cols=39 Identities=26% Similarity=0.421 Sum_probs=30.4
Q ss_pred HHHHHHHHHhCCcEEEEec-------CCCCCChHHHHHHHHHHHHHHHHHHHhc
Q 017327 111 YSYLKELLAKEGFLVISVP-------YNVTFDHANAANQVYERFNSCLDYVLST 157 (373)
Q Consensus 111 Yr~LLE~La~~Gy~ViAtP-------y~~tFDH~~iA~ev~~~F~~~~~~L~~~ 157 (373)
=+.|++.|.++|.++|||. |..++.| +.|.-+.+.|.+.
T Consensus 147 l~rLf~~l~~~gvvlVaTSN~~P~~Ly~~gl~r--------~~Flp~I~~l~~~ 192 (362)
T PF03969_consen 147 LKRLFEALFKRGVVLVATSNRPPEDLYKNGLQR--------ERFLPFIDLLKRR 192 (362)
T ss_pred HHHHHHHHHHCCCEEEecCCCChHHHcCCcccH--------HHHHHHHHHHHhc
Confidence 4689999999999999995 7788887 4566666666554
No 95
>cd03109 DTBS Dethiobiotin synthetase (DTBS) is the penultimate enzyme in the biotin biosynthesis pathway in Escherichia coli and other microorganisms. The enzyme catalyzes formation of the ureido ring of dethiobiotin from (7R,8S)-7,8-diaminononanoic acid (DAPA) and carbon dioxide. The enzyme utilizes carbon dioxide instead of hydrogen carbonate as substrate and is dependent on ATP and divalent metal ions as cofactors.
Probab=21.62 E-value=2e+02 Score=24.62 Aligned_cols=50 Identities=12% Similarity=0.076 Sum_probs=39.7
Q ss_pred CcEEEEeeccccccccchhhHHHHHHHHHhCCcEEEEecCCCCCChHHHHH
Q 017327 91 PRAIIKFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYNVTFDHANAAN 141 (373)
Q Consensus 91 P~gVIhFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~~tFDH~~iA~ 141 (373)
=.-+|+=.||.+++..-+.++-.+...| +.-..+|++|..-+.+|.....
T Consensus 40 d~vliEGaGg~~~p~~~~~~~~d~~~~~-~~~vllV~~~~~g~i~~a~~~~ 89 (134)
T cd03109 40 DFVLVEGAGGLCVPLKEDFTNADVAKEL-NLPAILVTSAGLGSINHAFLTI 89 (134)
T ss_pred CEEEEECCCccccCCCCCCCHHHHHHHh-CCCEEEEEcCCCCcHhHHHHHH
Confidence 3568888999999999999988888777 4456788888888888864443
No 96
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=21.61 E-value=4.5e+02 Score=27.36 Aligned_cols=93 Identities=25% Similarity=0.363 Sum_probs=60.2
Q ss_pred cccceEecc--------EEEeCCCCCCCCcEEE-EeeccccccccchhhHHHHHHHHHhCCcEEEEecCC---------C
Q 017327 71 NKIYQRLGS--------CLIIPPLNGKKPRAII-KFLGGAFIGAVPEVTYSYLKELLAKEGFLVISVPYN---------V 132 (373)
Q Consensus 71 ~~~w~~~~~--------~~vl~Pp~~~~P~gVI-hFiGGAfvGa~PqitYr~LLE~La~~Gy~ViAtPy~---------~ 132 (373)
.+.||++.. +|+..|-+..+|.-|+ |=|=|.+ -.| .=|.|.+.|.++||.||..=+. +
T Consensus 48 ~~~re~v~~pdg~~~~ldw~~~p~~~~~P~vVl~HGL~G~s--~s~--y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p 123 (345)
T COG0429 48 AYTRERLETPDGGFIDLDWSEDPRAAKKPLVVLFHGLEGSS--NSP--YARGLMRALSRRGWLVVVFHFRGCSGEANTSP 123 (345)
T ss_pred ccceEEEEcCCCCEEEEeeccCccccCCceEEEEeccCCCC--cCH--HHHHHHHHHHhcCCeEEEEecccccCCcccCc
Confidence 566777654 6777664455564433 4333332 244 6688999999999999986443 3
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCeeeecCCCC
Q 017327 133 TFDHANAANQVYERFNSCLDYVLSTGLPDANLTPDDLVNLPIYSVGHRPA 182 (373)
Q Consensus 133 tFDH~~iA~ev~~~F~~~~~~L~~~g~~~~gl~~~~~~~lPv~gVGHS~a 182 (373)
.+=|..-- +.+.-+++.|+..+.+ -|++-||=|.|
T Consensus 124 ~~yh~G~t----~D~~~~l~~l~~~~~~-----------r~~~avG~SLG 158 (345)
T COG0429 124 RLYHSGET----EDIRFFLDWLKARFPP-----------RPLYAVGFSLG 158 (345)
T ss_pred ceecccch----hHHHHHHHHHHHhCCC-----------CceEEEEeccc
Confidence 44454443 5567788888876442 49999999944
No 97
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=20.50 E-value=83 Score=32.23 Aligned_cols=22 Identities=23% Similarity=0.371 Sum_probs=19.3
Q ss_pred HHHHHHHHhCCcEEEEecCCCC
Q 017327 112 SYLKELLAKEGFLVISVPYNVT 133 (373)
Q Consensus 112 r~LLE~La~~Gy~ViAtPy~~t 133 (373)
+|++++|-++||.|+||=-.++
T Consensus 20 swivk~LL~rGY~V~gtVR~~~ 41 (327)
T KOG1502|consen 20 SWIVKLLLSRGYTVRGTVRDPE 41 (327)
T ss_pred HHHHHHHHhCCCEEEEEEcCcc
Confidence 5999999999999999966654
No 98
>smart00506 A1pp Appr-1"-p processing enzyme. Function determined by Martzen et al. Extended family detected by reciprocal PSI-BLAST searches (unpublished results, and Pehrson & Fuji).
Probab=20.41 E-value=2.6e+02 Score=23.06 Aligned_cols=65 Identities=17% Similarity=0.231 Sum_probs=41.3
Q ss_pred EeccEEEeCCCCCCCCcEEEEeeccccccc---cc---hhhHHHHHHHHHhCCcEEEEecCC----CCCChHHHHH
Q 017327 76 RLGSCLIIPPLNGKKPRAIIKFLGGAFIGA---VP---EVTYSYLKELLAKEGFLVISVPYN----VTFDHANAAN 141 (373)
Q Consensus 76 ~~~~~~vl~Pp~~~~P~gVIhFiGGAfvGa---~P---qitYr~LLE~La~~Gy~ViAtPy~----~tFDH~~iA~ 141 (373)
+.++|.+.+. ....++-|||.++=-+-+. .. .-+|+.+|+...+.+..-||.|=. .+++...+|+
T Consensus 57 ~~G~~~~~~~-~~~~~~~Iih~~~p~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~sIa~P~igtG~~g~~~~~~~~ 131 (133)
T smart00506 57 PVGTAVVTEG-GNLPAKYVIHAVGPRASGHSNEGFELLENAYRNCLELAIELGITSVAIPLIGTGIYGVPKDRSAQ 131 (133)
T ss_pred CCccEEEecC-CCCCCCEEEEeCCCCCCCCCccHHHHHHHHHHHHHHHHHHcCCCEEEECCccCCCCCCCHHHHHh
Confidence 4555555543 3345789999987554432 11 446777777777889999999953 2455555443
Done!